Query 019775
Match_columns 336
No_of_seqs 237 out of 2913
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 06:54:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019775.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019775hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fxa_A SIS domain protein; str 100.0 1.5E-32 5.3E-37 231.4 20.1 195 14-208 5-199 (201)
2 3etn_A Putative phosphosugar i 100.0 4.4E-32 1.5E-36 231.3 21.9 198 10-208 11-215 (220)
3 3sho_A Transcriptional regulat 100.0 6.2E-29 2.1E-33 206.9 17.3 168 16-190 2-170 (187)
4 2xhz_A KDSD, YRBH, arabinose 5 100.0 1.7E-28 6E-33 203.5 18.8 173 14-187 10-182 (183)
5 1m3s_A Hypothetical protein YC 100.0 5.7E-28 1.9E-32 200.9 21.2 175 20-200 4-184 (186)
6 1vim_A Hypothetical protein AF 100.0 3.2E-27 1.1E-31 198.5 21.6 180 15-201 9-195 (200)
7 1jeo_A MJ1247, hypothetical pr 100.0 2.4E-27 8.2E-32 196.1 19.6 173 17-200 4-178 (180)
8 2yva_A DNAA initiator-associat 99.9 2.9E-24 1E-28 179.9 18.6 162 17-187 2-190 (196)
9 1x92_A APC5045, phosphoheptose 99.9 5.1E-24 1.7E-28 178.9 16.5 162 16-187 5-194 (199)
10 2xbl_A Phosphoheptose isomeras 99.9 6.8E-23 2.3E-27 171.8 14.7 164 14-186 4-193 (198)
11 3trj_A Phosphoheptose isomeras 99.9 2.3E-22 7.7E-27 168.6 17.6 163 16-187 6-195 (201)
12 3k2v_A Putative D-arabinose 5- 99.9 1.9E-22 6.6E-27 161.2 10.9 148 183-334 2-149 (149)
13 1tk9_A Phosphoheptose isomeras 99.9 6.5E-22 2.2E-26 164.5 14.5 159 16-185 3-186 (188)
14 3cvj_A Putative phosphoheptose 99.9 4.2E-22 1.4E-26 172.4 13.4 176 19-197 5-224 (243)
15 3knz_A Putative sugar binding 99.9 2.5E-21 8.4E-26 176.5 18.2 169 15-188 11-181 (366)
16 2i2w_A Phosphoheptose isomeras 99.9 1.9E-21 6.4E-26 164.8 16.1 161 16-184 22-207 (212)
17 1j5x_A Glucosamine-6-phosphate 99.9 2E-21 6.8E-26 176.2 17.0 164 15-186 11-181 (342)
18 3hba_A Putative phosphosugar i 99.9 1.2E-20 4E-25 170.1 19.8 162 18-184 6-170 (334)
19 1nri_A Hypothetical protein HI 99.9 6.3E-21 2.1E-25 170.0 17.6 177 14-193 30-231 (306)
20 3fj1_A Putative phosphosugar i 99.9 2E-20 6.9E-25 169.4 19.6 162 18-184 7-171 (344)
21 1moq_A Glucosamine 6-phosphate 99.9 8.6E-21 3E-25 173.8 16.4 235 12-266 4-247 (368)
22 3tbf_A Glucosamine--fructose-6 99.9 1.4E-20 4.9E-25 172.1 16.6 173 11-188 5-186 (372)
23 2a3n_A Putative glucosamine-fr 99.8 4E-20 1.4E-24 168.5 18.5 131 24-157 25-158 (355)
24 2poc_A D-fructose-6- PH, isome 99.8 2.1E-20 7.1E-25 171.1 16.3 168 15-189 4-182 (367)
25 2zj3_A Glucosamine--fructose-6 99.8 1.5E-20 5.2E-25 172.4 15.4 168 14-188 13-191 (375)
26 3k6e_A CBS domain protein; str 99.8 3.2E-20 1.1E-24 149.5 13.7 124 207-334 13-139 (156)
27 2aml_A SIS domain protein; 469 99.8 6.4E-20 2.2E-24 168.1 16.3 169 14-188 11-182 (373)
28 3g68_A Putative phosphosugar i 99.8 8.9E-20 3E-24 165.7 16.5 160 21-188 5-166 (352)
29 3c3j_A Putative tagatose-6-pho 99.8 9.2E-20 3.1E-24 167.8 13.6 164 17-182 13-189 (384)
30 3hf7_A Uncharacterized CBS-dom 99.8 5.2E-20 1.8E-24 143.6 10.1 122 209-334 2-124 (130)
31 3fkj_A Putative phosphosugar i 99.8 9.7E-20 3.3E-24 165.0 13.2 121 34-155 18-143 (347)
32 4esy_A CBS domain containing m 99.8 3.8E-20 1.3E-24 151.2 9.2 122 208-334 17-159 (170)
33 2bpl_A Glucosamine--fructose-6 99.8 2.8E-19 9.7E-24 173.8 16.9 180 12-196 244-432 (608)
34 3i8n_A Uncharacterized protein 99.8 5.5E-20 1.9E-24 143.4 9.3 121 208-334 5-126 (130)
35 3lv9_A Putative transporter; C 99.8 1.6E-19 5.5E-24 143.9 11.6 120 208-334 22-142 (148)
36 3eua_A Putative fructose-amino 99.8 2.5E-19 8.4E-24 161.5 14.1 117 40-157 10-130 (329)
37 3nqr_A Magnesium and cobalt ef 99.8 6.5E-20 2.2E-24 142.4 8.0 120 209-334 3-123 (127)
38 3kpb_A Uncharacterized protein 99.8 3.3E-19 1.1E-23 137.1 11.5 117 209-334 1-117 (122)
39 3fhm_A Uncharacterized protein 99.8 1.6E-19 5.5E-24 146.7 10.2 135 197-334 12-147 (165)
40 3jtf_A Magnesium and cobalt ef 99.8 1.3E-19 4.5E-24 141.0 8.8 119 208-334 4-123 (129)
41 3lfr_A Putative metal ION tran 99.8 1.2E-19 4.1E-24 142.7 8.3 121 209-334 3-124 (136)
42 3lhh_A CBS domain protein; str 99.8 2.9E-19 9.8E-24 146.3 10.6 121 207-334 40-161 (172)
43 2e5f_A Hypothetical protein PH 99.8 3.3E-19 1.1E-23 160.5 11.3 148 23-186 6-156 (325)
44 3lqn_A CBS domain protein; csg 99.8 5.9E-19 2E-23 140.9 11.0 125 206-334 12-140 (150)
45 3ctu_A CBS domain protein; str 99.8 2E-18 7E-23 138.7 13.1 125 206-334 12-139 (156)
46 1pbj_A Hypothetical protein; s 99.8 1.4E-18 4.9E-23 134.1 11.7 119 209-334 1-119 (125)
47 3oco_A Hemolysin-like protein 99.8 6E-19 2.1E-23 141.5 9.7 120 208-334 19-140 (153)
48 2rih_A Conserved protein with 99.8 1.9E-18 6.4E-23 136.5 11.8 120 208-334 4-125 (141)
49 3gby_A Uncharacterized protein 99.8 5.3E-19 1.8E-23 137.3 7.8 120 208-334 4-123 (128)
50 3odp_A Putative tagatose-6-pho 99.8 4.6E-18 1.6E-22 156.1 15.4 162 17-180 18-192 (393)
51 2rc3_A CBS domain; in SITU pro 99.8 2.5E-18 8.6E-23 134.7 11.2 121 210-334 7-128 (135)
52 4gqw_A CBS domain-containing p 99.8 1.1E-18 3.8E-23 139.4 9.2 125 208-334 4-140 (152)
53 2p9m_A Hypothetical protein MJ 99.8 5.1E-18 1.7E-22 133.4 12.6 121 208-334 7-133 (138)
54 1y5h_A Hypothetical protein RV 99.8 1.6E-18 5.3E-23 135.5 9.5 121 208-334 7-128 (133)
55 3oi8_A Uncharacterized protein 99.8 7E-19 2.4E-23 141.6 7.6 119 208-333 37-156 (156)
56 3ocm_A Putative membrane prote 99.8 1.8E-18 6.1E-23 141.6 10.1 119 208-334 35-154 (173)
57 2o16_A Acetoin utilization pro 99.8 3.8E-18 1.3E-22 137.9 11.7 122 208-334 4-132 (160)
58 3sl7_A CBS domain-containing p 99.8 3.2E-18 1.1E-22 140.8 11.3 124 209-334 4-153 (180)
59 2ef7_A Hypothetical protein ST 99.8 3.7E-18 1.3E-22 133.4 10.8 119 209-334 4-122 (133)
60 1pvm_A Conserved hypothetical 99.8 5E-18 1.7E-22 140.4 12.1 123 208-334 8-130 (184)
61 2yzi_A Hypothetical protein PH 99.8 5E-18 1.7E-22 133.4 11.1 121 208-334 6-126 (138)
62 1yav_A Hypothetical protein BS 99.8 5.4E-18 1.8E-22 136.7 11.5 124 207-334 12-139 (159)
63 3fv6_A YQZB protein; CBS domai 99.7 5.1E-18 1.7E-22 136.9 10.9 121 208-334 16-141 (159)
64 4fry_A Putative signal-transdu 99.7 6.9E-18 2.4E-22 135.8 10.3 122 209-334 7-132 (157)
65 2nyc_A Nuclear protein SNF4; b 99.7 1.2E-17 4.1E-22 132.1 11.4 122 209-334 8-138 (144)
66 1o50_A CBS domain-containing p 99.7 1.6E-17 5.5E-22 133.7 12.0 121 208-334 15-150 (157)
67 2emq_A Hypothetical conserved 99.7 9.5E-18 3.2E-22 134.9 10.3 123 208-334 10-136 (157)
68 2uv4_A 5'-AMP-activated protei 99.7 2.2E-17 7.7E-22 132.1 12.0 122 207-334 21-148 (152)
69 3i0z_A Putative tagatose-6-pho 99.7 2.6E-17 9E-22 150.9 13.8 162 17-181 15-194 (389)
70 3kxr_A Magnesium transporter, 99.7 1.9E-17 6.5E-22 139.2 10.9 115 209-334 54-171 (205)
71 2pfi_A Chloride channel protei 99.7 6.7E-17 2.3E-21 130.7 11.3 122 208-334 12-144 (164)
72 2j9l_A Chloride channel protei 99.7 6.4E-17 2.2E-21 133.6 10.4 124 208-334 10-162 (185)
73 3l2b_A Probable manganase-depe 99.7 1.3E-16 4.4E-21 138.0 12.0 124 207-334 5-241 (245)
74 1vr9_A CBS domain protein/ACT 99.7 1.3E-16 4.3E-21 135.1 9.0 116 208-334 12-127 (213)
75 3t4n_C Nuclear protein SNF4; C 99.7 4.9E-16 1.7E-20 139.8 12.1 122 209-334 187-317 (323)
76 2d4z_A Chloride channel protei 99.6 4.2E-16 1.4E-20 134.4 9.8 123 207-334 11-243 (250)
77 2oux_A Magnesium transporter; 99.6 3.2E-16 1.1E-20 138.6 9.1 116 208-334 136-256 (286)
78 3ddj_A CBS domain-containing p 99.6 1.1E-15 3.8E-20 135.7 12.0 121 210-334 157-282 (296)
79 2yvy_A MGTE, Mg2+ transporter 99.6 9.9E-16 3.4E-20 134.9 10.6 115 209-334 135-254 (278)
80 3org_A CMCLC; transporter, tra 99.6 2.2E-16 7.6E-21 154.0 6.8 125 207-334 451-622 (632)
81 2qrd_G Protein C1556.08C; AMPK 99.6 6.3E-15 2.1E-19 133.1 13.8 121 210-334 183-312 (334)
82 3kh5_A Protein MJ1225; AMPK, A 99.6 3.7E-15 1.3E-19 131.0 11.9 120 210-334 149-278 (280)
83 2yzq_A Putative uncharacterize 99.6 2E-15 6.9E-20 133.0 9.3 123 208-334 125-276 (282)
84 3kh5_A Protein MJ1225; AMPK, A 99.6 8.3E-15 2.9E-19 128.7 13.1 125 203-334 78-202 (280)
85 3ddj_A CBS domain-containing p 99.6 1.5E-15 5.2E-20 134.8 8.4 135 193-333 4-147 (296)
86 3jx9_A Putative phosphoheptose 99.6 3.6E-14 1.2E-18 113.8 14.6 157 21-186 3-165 (170)
87 1tzb_A Glucose-6-phosphate iso 99.6 1.8E-14 6.2E-19 128.2 14.0 114 52-182 36-151 (302)
88 3pc3_A CG1753, isoform A; CBS, 99.6 6.7E-15 2.3E-19 140.9 11.8 120 208-334 383-508 (527)
89 2zy9_A Mg2+ transporter MGTE; 99.5 9.3E-15 3.2E-19 137.7 8.9 116 208-334 154-274 (473)
90 3usb_A Inosine-5'-monophosphat 99.5 2.7E-14 9.2E-19 135.4 11.4 129 196-334 95-231 (511)
91 2yzq_A Putative uncharacterize 99.5 4.4E-14 1.5E-18 124.3 11.8 119 209-332 60-179 (282)
92 2v8q_E 5'-AMP-activated protei 99.5 5.8E-14 2E-18 126.6 10.9 121 210-334 191-320 (330)
93 2v8q_E 5'-AMP-activated protei 99.5 3.5E-14 1.2E-18 128.0 8.7 125 208-334 34-174 (330)
94 3t4n_C Nuclear protein SNF4; C 99.5 1.1E-13 3.6E-18 124.4 11.8 123 208-334 113-245 (323)
95 4fxs_A Inosine-5'-monophosphat 99.5 2E-14 6.8E-19 135.8 6.0 116 209-334 89-206 (496)
96 2qrd_G Protein C1556.08C; AMPK 99.4 2.9E-13 9.8E-18 122.2 9.6 124 209-334 22-169 (334)
97 1zfj_A Inosine monophosphate d 99.4 3.5E-13 1.2E-17 128.0 10.7 116 209-334 90-208 (491)
98 4avf_A Inosine-5'-monophosphat 99.4 1.4E-14 4.9E-19 136.7 -0.1 115 209-334 88-204 (490)
99 1me8_A Inosine-5'-monophosphat 99.4 2.2E-14 7.7E-19 136.1 0.5 116 210-334 97-218 (503)
100 1vrd_A Inosine-5'-monophosphat 99.4 2.1E-14 7.2E-19 136.4 -0.2 116 209-334 95-212 (494)
101 4af0_A Inosine-5'-monophosphat 99.4 4.5E-14 1.5E-18 130.7 0.9 128 196-334 120-255 (556)
102 1jcn_A Inosine monophosphate d 99.3 1E-13 3.5E-18 132.3 -4.1 118 209-334 108-230 (514)
103 2cu0_A Inosine-5'-monophosphat 99.2 1.1E-12 3.9E-17 124.0 -0.1 112 210-334 94-205 (486)
104 3ghd_A A cystathionine beta-sy 99.2 3.2E-11 1.1E-15 82.5 5.8 69 221-290 2-70 (70)
105 2q8n_A Glucose-6-phosphate iso 99.1 8.4E-11 2.9E-15 108.9 7.4 108 40-148 65-195 (460)
106 3tbf_A Glucosamine--fructose-6 98.9 8.6E-08 2.9E-12 87.4 18.3 154 28-192 204-360 (372)
107 3fio_A A cystathionine beta-sy 98.9 2.8E-09 9.6E-14 72.7 5.8 68 221-289 2-69 (70)
108 1zzg_A Glucose-6-phosphate iso 98.8 2.9E-09 1E-13 97.5 5.9 107 41-149 54-173 (415)
109 1moq_A Glucosamine 6-phosphate 98.8 1.2E-07 4.1E-12 86.4 16.6 144 41-193 212-357 (368)
110 2e5f_A Hypothetical protein PH 98.8 1.9E-07 6.5E-12 83.6 17.1 148 28-193 165-315 (325)
111 2zj3_A Glucosamine--fructose-6 98.8 2.1E-07 7E-12 85.1 17.2 153 30-193 210-364 (375)
112 1vr9_A CBS domain protein/ACT 98.8 1.2E-08 4.3E-13 85.7 7.3 101 210-320 73-174 (213)
113 2bpl_A Glucosamine--fructose-6 98.7 8.4E-07 2.9E-11 86.1 19.1 145 40-193 451-597 (608)
114 3odp_A Putative tagatose-6-pho 98.7 4.4E-07 1.5E-11 83.2 16.2 161 26-193 206-373 (393)
115 2poc_A D-fructose-6- PH, isome 98.7 7.3E-07 2.5E-11 81.2 16.7 153 30-193 200-356 (367)
116 3knz_A Putative sugar binding 98.6 4.5E-07 1.5E-11 82.4 13.3 138 42-193 212-350 (366)
117 4esy_A CBS domain containing m 98.6 5E-08 1.7E-12 78.8 5.7 57 276-334 17-73 (170)
118 3fj1_A Putative phosphosugar i 98.6 6.6E-07 2.3E-11 80.6 13.3 137 43-193 195-333 (344)
119 3i0z_A Putative tagatose-6-pho 98.6 1.6E-06 5.5E-11 79.3 15.8 156 25-193 206-368 (389)
120 3hba_A Putative phosphosugar i 98.6 6.1E-07 2.1E-11 80.5 12.6 125 46-193 197-323 (334)
121 3g68_A Putative phosphosugar i 98.5 8.4E-07 2.9E-11 80.2 13.1 138 42-193 197-335 (352)
122 3fkj_A Putative phosphosugar i 98.5 9.3E-06 3.2E-10 73.2 18.8 150 27-193 186-338 (347)
123 2aml_A SIS domain protein; 469 98.5 2.7E-06 9.2E-11 77.6 15.3 139 42-193 213-353 (373)
124 3ghd_A A cystathionine beta-sy 98.4 2.5E-07 8.4E-12 62.9 5.2 44 287-333 2-45 (70)
125 1j5x_A Glucosamine-6-phosphate 98.4 2.9E-06 1E-10 76.4 13.3 130 43-193 201-332 (342)
126 1b0z_A Protein (phosphoglucose 98.4 3.7E-07 1.3E-11 84.4 7.0 113 41-154 59-197 (445)
127 3kpb_A Uncharacterized protein 98.4 7.3E-07 2.5E-11 67.4 7.3 58 210-269 63-120 (122)
128 3gby_A Uncharacterized protein 98.4 5.2E-07 1.8E-11 69.0 5.7 59 209-269 68-126 (128)
129 3jtf_A Magnesium and cobalt ef 98.3 1.2E-06 4E-11 67.2 7.5 57 210-269 70-126 (129)
130 3hf7_A Uncharacterized CBS-dom 98.3 1.2E-06 3.9E-11 67.3 7.4 57 209-268 70-126 (130)
131 4gqw_A CBS domain-containing p 98.3 9.1E-07 3.1E-11 69.5 6.8 59 209-269 85-143 (152)
132 4fry_A Putative signal-transdu 98.3 9.7E-07 3.3E-11 70.0 6.8 60 208-270 77-136 (157)
133 3nqr_A Magnesium and cobalt ef 98.3 8.5E-07 2.9E-11 67.7 6.3 57 209-268 69-125 (127)
134 2ef7_A Hypothetical protein ST 98.3 1.2E-06 4.1E-11 67.3 7.2 59 209-269 67-125 (133)
135 2wu8_A Glucose-6-phosphate iso 98.3 9.5E-07 3.3E-11 83.2 7.7 113 41-155 121-262 (549)
136 3i8n_A Uncharacterized protein 98.3 9.5E-07 3.2E-11 67.7 6.5 57 209-268 72-128 (130)
137 3sl7_A CBS domain-containing p 98.3 9.8E-07 3.3E-11 71.5 6.7 60 208-269 97-156 (180)
138 1o50_A CBS domain-containing p 98.3 1.4E-06 4.8E-11 69.1 7.4 59 208-269 95-153 (157)
139 3k6e_A CBS domain protein; str 98.3 1.3E-06 4.5E-11 69.4 7.2 58 208-269 85-142 (156)
140 3fio_A A cystathionine beta-sy 98.3 9.7E-07 3.3E-11 59.7 5.2 45 287-334 2-46 (70)
141 3eua_A Putative fructose-amino 98.3 9E-06 3.1E-10 72.8 13.0 149 28-193 169-320 (329)
142 3lhh_A CBS domain protein; str 98.3 5.5E-07 1.9E-11 72.8 4.6 57 276-334 41-100 (172)
143 3fv6_A YQZB protein; CBS domai 98.3 1.4E-06 4.8E-11 69.3 6.9 61 209-269 81-144 (159)
144 3lv9_A Putative transporter; C 98.3 1.6E-06 5.6E-11 68.0 7.2 58 209-269 88-145 (148)
145 3kxr_A Magnesium transporter, 98.3 1.9E-06 6.6E-11 71.7 7.7 59 209-269 116-174 (205)
146 2rc3_A CBS domain; in SITU pro 98.3 2E-06 6.7E-11 66.3 7.2 59 208-269 73-131 (135)
147 2a3n_A Putative glucosamine-fr 98.3 3.4E-06 1.2E-10 76.4 9.9 137 41-193 206-346 (355)
148 3oco_A Hemolysin-like protein 98.3 1.7E-06 5.9E-11 68.3 7.0 58 209-269 86-143 (153)
149 3lfr_A Putative metal ION tran 98.3 9.6E-07 3.3E-11 68.3 5.4 57 209-268 70-126 (136)
150 2p9m_A Hypothetical protein MJ 98.3 2E-06 6.8E-11 66.5 7.0 59 209-269 73-136 (138)
151 3k2v_A Putative D-arabinose 5- 98.2 8.9E-07 3.1E-11 69.6 5.0 56 277-334 28-85 (149)
152 2nyc_A Nuclear protein SNF4; b 98.2 1.7E-06 5.8E-11 67.3 6.6 61 209-269 77-141 (144)
153 3l2b_A Probable manganase-depe 98.2 8.2E-07 2.8E-11 76.1 5.1 57 276-334 6-62 (245)
154 3lqn_A CBS domain protein; csg 98.2 3.1E-06 1.1E-10 66.4 8.0 59 207-269 85-143 (150)
155 3fhm_A Uncharacterized protein 98.2 2E-06 6.9E-11 68.8 6.8 59 208-269 92-150 (165)
156 1pbj_A Hypothetical protein; s 98.2 2E-06 7E-11 65.1 6.1 58 209-269 65-122 (125)
157 2yzi_A Hypothetical protein PH 98.2 1.7E-06 5.7E-11 66.9 5.5 56 276-333 6-61 (138)
158 2uv4_A 5'-AMP-activated protei 98.2 3.1E-06 1.1E-10 66.7 7.1 57 210-268 88-150 (152)
159 3ctu_A CBS domain protein; str 98.2 1.8E-06 6.1E-11 68.4 5.7 57 276-334 14-72 (156)
160 2cxn_A Glucose-6-phosphate iso 98.2 1.2E-05 3.9E-10 76.0 11.6 114 41-155 127-269 (557)
161 2o16_A Acetoin utilization pro 98.1 3.5E-06 1.2E-10 67.1 6.5 59 208-269 77-135 (160)
162 2rih_A Conserved protein with 98.1 1.9E-06 6.7E-11 66.9 4.6 57 276-334 4-62 (141)
163 3c3j_A Putative tagatose-6-pho 98.1 3.6E-05 1.2E-09 70.4 13.6 134 52-193 223-363 (384)
164 2pfi_A Chloride channel protei 98.1 3.6E-06 1.2E-10 67.0 6.1 57 276-334 12-70 (164)
165 2emq_A Hypothetical conserved 98.1 7.4E-06 2.5E-10 64.7 7.7 59 207-269 81-139 (157)
166 1y5h_A Hypothetical protein RV 98.1 2.9E-06 9.9E-11 65.1 5.0 56 209-267 74-129 (133)
167 3oi8_A Uncharacterized protein 98.1 4.9E-06 1.7E-10 65.9 6.3 53 209-264 103-155 (156)
168 1yav_A Hypothetical protein BS 98.1 1.7E-06 5.8E-11 68.8 3.5 57 276-334 13-71 (159)
169 1pvm_A Conserved hypothetical 98.1 3.3E-06 1.1E-10 68.9 5.0 59 208-268 74-132 (184)
170 2j9l_A Chloride channel protei 98.0 7.2E-06 2.5E-10 66.6 6.5 60 208-270 107-166 (185)
171 2d4z_A Chloride channel protei 98.0 3.4E-06 1.2E-10 72.3 4.6 57 276-334 12-70 (250)
172 2oux_A Magnesium transporter; 98.0 9.7E-06 3.3E-10 71.1 7.2 59 209-269 201-259 (286)
173 3ocm_A Putative membrane prote 98.0 5.3E-06 1.8E-10 67.1 4.9 74 255-334 16-94 (173)
174 2o2c_A GPI, glucose-6-phosphat 98.0 7.8E-06 2.7E-10 77.8 6.2 114 41-155 175-322 (613)
175 2yvy_A MGTE, Mg2+ transporter 98.0 9.4E-06 3.2E-10 70.9 6.1 59 209-269 199-257 (278)
176 3usb_A Inosine-5'-monophosphat 97.9 5E-05 1.7E-09 71.9 10.3 104 208-320 174-279 (511)
177 1me8_A Inosine-5'-monophosphat 97.9 1.5E-06 5.1E-11 82.3 -0.9 109 207-322 159-267 (503)
178 2zy9_A Mg2+ transporter MGTE; 97.8 4E-05 1.4E-09 72.0 7.5 59 209-269 219-277 (473)
179 1t10_A GPI, glucose-6-phosphat 97.8 0.00013 4.6E-09 69.3 10.8 114 41-155 174-321 (605)
180 3ff1_A Glucose-6-phosphate iso 97.7 3.8E-05 1.3E-09 70.6 6.5 114 41-155 63-201 (446)
181 3pc3_A CG1753, isoform A; CBS, 97.6 3.4E-05 1.2E-09 73.6 3.9 57 276-334 383-441 (527)
182 4fxs_A Inosine-5'-monophosphat 97.4 0.00031 1.1E-08 66.2 8.2 54 277-332 89-142 (496)
183 3org_A CMCLC; transporter, tra 97.4 9.7E-05 3.3E-09 71.9 4.9 55 210-267 569-623 (632)
184 1zfj_A Inosine monophosphate d 97.3 0.00044 1.5E-08 65.3 7.5 59 209-269 152-211 (491)
185 4avf_A Inosine-5'-monophosphat 97.2 5.3E-05 1.8E-09 71.3 0.0 62 207-268 145-206 (490)
186 4af0_A Inosine-5'-monophosphat 97.1 7.5E-05 2.6E-09 69.5 0.0 59 208-268 199-257 (556)
187 1vrd_A Inosine-5'-monophosphat 97.1 0.00016 5.6E-09 68.3 2.2 62 208-269 154-215 (494)
188 4em6_D Glucose-6-phosphate iso 96.9 0.0029 9.8E-08 59.6 9.0 98 41-138 128-249 (553)
189 3ljk_A Glucose-6-phosphate iso 96.9 0.0032 1.1E-07 59.1 9.2 98 41-138 118-241 (543)
190 2cu0_A Inosine-5'-monophosphat 96.9 0.00015 5.2E-09 68.3 0.2 59 208-268 149-207 (486)
191 3ujh_A Glucose-6-phosphate iso 96.9 0.004 1.4E-07 58.8 9.6 98 41-138 129-258 (567)
192 1tzb_A Glucose-6-phosphate iso 96.8 0.0089 3.1E-07 52.5 10.6 118 41-193 169-290 (302)
193 1jcn_A Inosine monophosphate d 96.7 0.00057 2E-08 64.9 2.4 67 259-333 96-165 (514)
194 3qki_A Glucose-6-phosphate iso 96.5 0.013 4.3E-07 55.7 10.1 98 41-138 144-289 (597)
195 3hjb_A Glucose-6-phosphate iso 96.2 0.013 4.6E-07 55.2 8.5 98 41-138 150-272 (574)
196 2zkq_b 40S ribosomal protein S 96.2 0.048 1.7E-06 46.9 11.1 113 55-188 72-187 (295)
197 3bch_A 40S ribosomal protein S 96.0 0.075 2.6E-06 44.7 11.0 124 42-188 90-220 (253)
198 1vi6_A 30S ribosomal protein S 95.8 0.19 6.3E-06 41.1 12.4 124 42-188 55-184 (208)
199 3iz6_A 40S ribosomal protein S 95.7 0.22 7.4E-06 42.8 13.0 118 51-188 73-191 (305)
200 3j20_B 30S ribosomal protein S 95.4 0.4 1.4E-05 39.0 13.0 114 55-188 65-180 (202)
201 2xzm_B RPS0E; ribosome, transl 95.2 0.21 7.3E-06 41.7 11.0 115 55-188 67-183 (241)
202 3u5c_A 40S ribosomal protein S 94.8 0.51 1.8E-05 39.6 12.2 125 42-188 56-186 (252)
203 1wiw_A Glucose-6-phosphate iso 94.7 0.0078 2.7E-07 52.3 0.9 39 97-147 58-96 (290)
204 3bbn_B Ribosomal protein S2; s 93.4 0.27 9.1E-06 40.9 7.7 69 101-187 157-225 (231)
205 2nap_A Protein (periplasmic ni 91.9 2.1 7.3E-05 42.0 13.4 115 41-157 83-225 (723)
206 2iv2_X Formate dehydrogenase H 91.6 2.3 8E-05 41.7 13.3 59 98-157 163-223 (715)
207 3ml1_A NAPA, periplasmic nitra 89.6 6.6 0.00022 39.1 14.5 126 55-197 114-261 (802)
208 2d59_A Hypothetical protein PH 87.8 2.9 0.0001 31.8 8.4 83 50-136 19-109 (144)
209 1h0h_A Formate dehydrogenase ( 86.1 6.2 0.00021 40.2 12.0 59 98-157 181-241 (977)
210 2qip_A Protein of unknown func 85.5 4.5 0.00015 31.5 8.6 108 43-153 35-160 (165)
211 1kyq_A Met8P, siroheme biosynt 85.3 6.6 0.00022 33.5 10.0 100 55-157 14-169 (274)
212 2e7z_A Acetylene hydratase AHY 85.2 5.5 0.00019 39.1 10.9 59 98-157 157-218 (727)
213 2vpz_A Thiosulfate reductase; 85.2 6.6 0.00022 38.8 11.5 59 98-157 196-257 (765)
214 2vqe_B 30S ribosomal protein S 84.5 2.6 8.8E-05 35.5 7.0 71 100-188 157-227 (256)
215 1kqf_A FDH-N alpha, formate de 82.2 8.1 0.00028 39.6 11.0 58 99-157 220-280 (1015)
216 3ff4_A Uncharacterized protein 80.0 4 0.00014 30.2 5.8 79 55-136 5-90 (122)
217 1iuk_A Hypothetical protein TT 79.6 4.5 0.00015 30.6 6.2 82 51-136 11-102 (140)
218 3dfz_A SIRC, precorrin-2 dehyd 79.3 8.8 0.0003 31.6 8.3 99 55-157 32-149 (223)
219 2l82_A Designed protein OR32; 79.3 15 0.0005 26.2 9.7 106 38-144 10-119 (162)
220 2ivf_A Ethylbenzene dehydrogen 78.3 13 0.00043 38.0 10.8 85 99-200 244-330 (976)
221 2duw_A Putative COA-binding pr 77.3 9 0.00031 29.0 7.4 82 50-135 10-101 (145)
222 3r8n_B 30S ribosomal protein S 76.7 3.2 0.00011 34.1 4.8 48 100-153 148-195 (218)
223 1pjq_A CYSG, siroheme synthase 76.1 14 0.00049 33.9 9.7 99 55-156 13-130 (457)
224 3s5j_B Ribose-phosphate pyroph 75.6 9 0.00031 33.5 7.7 82 56-137 3-91 (326)
225 1q16_A Respiratory nitrate red 75.4 14 0.00049 38.5 10.3 57 100-157 245-303 (1247)
226 3eod_A Protein HNR; response r 73.9 17 0.0006 25.9 8.1 96 55-154 8-110 (130)
227 3dah_A Ribose-phosphate pyroph 73.2 15 0.0005 32.1 8.4 81 56-136 7-94 (319)
228 5nul_A Flavodoxin; electron tr 72.7 9.3 0.00032 28.3 6.4 76 57-135 4-86 (138)
229 3u31_A SIR2A, transcriptional 72.1 12 0.0004 32.2 7.5 56 99-155 214-270 (290)
230 4ffl_A PYLC; amino acid, biosy 71.7 7.8 0.00027 34.2 6.6 40 116-155 12-51 (363)
231 2l8b_A Protein TRAI, DNA helic 71.5 27 0.00093 27.7 8.8 95 43-137 39-158 (189)
232 1u9y_A RPPK;, ribose-phosphate 70.4 10 0.00036 32.4 6.8 79 58-136 2-86 (284)
233 3dma_A Exopolyphosphatase-rela 68.9 60 0.002 28.4 13.4 112 38-153 6-140 (343)
234 1tif_A IF3-N, translation init 68.9 5.6 0.00019 26.8 3.7 44 105-148 16-62 (78)
235 4gqr_A Pancreatic alpha-amylas 68.5 7.3 0.00025 35.8 5.9 78 55-133 10-95 (496)
236 3llv_A Exopolyphosphatase-rela 68.0 12 0.0004 27.8 6.0 80 55-139 7-107 (141)
237 2l2q_A PTS system, cellobiose- 67.7 11 0.00039 26.9 5.6 70 61-136 14-84 (109)
238 3h5i_A Response regulator/sens 67.7 22 0.00076 25.8 7.6 84 55-142 6-92 (140)
239 3gt7_A Sensor protein; structu 67.4 20 0.00067 26.7 7.3 95 55-154 8-112 (154)
240 1y81_A Conserved hypothetical 67.4 36 0.0012 25.4 8.6 82 50-135 11-100 (138)
241 3gl9_A Response regulator; bet 67.1 18 0.00063 25.6 6.8 94 56-154 4-107 (122)
242 3kto_A Response regulator rece 67.1 22 0.00075 25.7 7.4 82 55-140 7-92 (136)
243 3fwz_A Inner membrane protein 66.9 11 0.00038 28.1 5.6 80 55-139 8-109 (140)
244 3hly_A Flavodoxin-like domain; 65.9 8 0.00027 29.8 4.8 77 60-137 9-91 (161)
245 3cf4_G Acetyl-COA decarboxylas 65.9 23 0.00079 27.5 7.5 46 41-86 22-68 (170)
246 1m53_A Isomaltulose synthase; 65.2 13 0.00045 35.2 7.0 70 63-133 42-111 (570)
247 1zja_A Trehalulose synthase; s 65.1 16 0.00054 34.5 7.5 70 62-132 28-97 (557)
248 4hv4_A UDP-N-acetylmuramate--L 65.0 16 0.00054 34.0 7.4 35 50-87 19-53 (494)
249 3snk_A Response regulator CHEY 64.8 18 0.00063 26.0 6.5 82 55-141 15-100 (135)
250 1dku_A Protein (phosphoribosyl 63.4 34 0.0012 29.7 8.7 82 56-137 9-97 (317)
251 1qkk_A DCTD, C4-dicarboxylate 63.3 25 0.00085 26.0 7.2 95 55-154 4-106 (155)
252 2ji4_A Phosphoribosyl pyrophos 62.8 15 0.00053 32.8 6.6 82 55-136 28-119 (379)
253 2raf_A Putative dinucleotide-b 62.4 17 0.0006 29.2 6.4 70 55-136 20-91 (209)
254 2rdm_A Response regulator rece 62.3 23 0.0008 25.1 6.7 84 56-142 7-93 (132)
255 1lwj_A 4-alpha-glucanotransfer 61.9 23 0.0008 32.1 7.8 70 62-133 19-88 (441)
256 2zic_A Dextran glucosidase; TI 61.4 15 0.00052 34.5 6.6 71 62-133 27-97 (543)
257 3lua_A Response regulator rece 61.1 43 0.0015 24.1 8.6 98 55-155 5-113 (140)
258 3riy_A NAD-dependent deacetyla 60.8 11 0.00038 32.0 5.1 55 99-154 210-264 (273)
259 1s5p_A NAD-dependent deacetyla 60.5 12 0.0004 31.1 5.1 55 99-154 165-219 (235)
260 1uok_A Oligo-1,6-glucosidase; 60.5 15 0.00052 34.6 6.5 70 62-132 27-96 (558)
261 2ze0_A Alpha-glucosidase; TIM 60.2 18 0.00063 34.1 7.0 70 62-132 27-96 (555)
262 4gud_A Imidazole glycerol phos 60.1 30 0.001 27.6 7.5 72 55-136 3-80 (211)
263 1y7p_A Hypothetical protein AF 59.8 19 0.00065 29.4 5.9 96 55-152 88-193 (223)
264 4dad_A Putative pilus assembly 59.7 38 0.0013 24.6 7.6 84 55-141 21-108 (146)
265 1ka9_H Imidazole glycerol phos 59.4 34 0.0012 27.1 7.6 71 56-136 4-83 (200)
266 3aj7_A Oligo-1,6-glucosidase; 59.2 23 0.00079 33.7 7.5 71 62-133 36-106 (589)
267 3cg4_A Response regulator rece 58.9 25 0.00086 25.4 6.4 83 55-141 8-94 (142)
268 4aie_A Glucan 1,6-alpha-glucos 58.8 20 0.00068 33.5 7.0 70 63-133 29-98 (549)
269 3i42_A Response regulator rece 58.4 41 0.0014 23.6 7.4 95 56-155 5-108 (127)
270 1vb5_A Translation initiation 58.3 51 0.0017 27.9 8.8 37 118-154 150-186 (276)
271 2r7k_A 5-formaminoimidazole-4- 58.3 18 0.00061 32.1 6.1 54 98-154 13-69 (361)
272 2yxb_A Coenzyme B12-dependent 58.0 24 0.00084 27.1 6.2 82 55-137 19-108 (161)
273 2r47_A Uncharacterized protein 57.9 16 0.00055 28.0 4.8 89 44-136 17-125 (157)
274 3k35_A NAD-dependent deacetyla 57.8 15 0.00051 32.0 5.3 54 99-153 204-257 (318)
275 1qv9_A F420-dependent methylen 57.6 15 0.00051 30.4 4.9 41 101-141 64-104 (283)
276 3lk7_A UDP-N-acetylmuramoylala 57.5 29 0.001 31.7 7.7 31 55-88 10-40 (451)
277 1mvo_A PHOP response regulator 57.3 28 0.00094 24.9 6.3 82 55-141 4-88 (136)
278 3f6p_A Transcriptional regulat 57.3 36 0.0012 23.8 6.9 82 56-141 4-86 (120)
279 3kht_A Response regulator; PSI 57.1 51 0.0018 23.8 7.9 95 56-154 7-112 (144)
280 4g65_A TRK system potassium up 56.7 24 0.00081 32.5 6.9 89 41-137 219-335 (461)
281 2hna_A Protein MIOC, flavodoxi 56.6 20 0.00069 26.8 5.5 52 104-155 5-57 (147)
282 1wzl_A Alpha-amylase II; pullu 56.5 22 0.00076 33.8 6.9 69 63-133 170-238 (585)
283 3ic5_A Putative saccharopine d 55.9 21 0.00071 25.0 5.3 76 55-136 6-101 (118)
284 2qxy_A Response regulator; reg 55.6 54 0.0019 23.5 8.2 81 55-140 5-87 (142)
285 1j0h_A Neopullulanase; beta-al 55.5 26 0.0009 33.3 7.2 70 62-133 172-241 (588)
286 2j48_A Two-component sensor ki 55.4 24 0.00082 24.2 5.5 82 56-141 3-88 (119)
287 3cnb_A DNA-binding response re 55.1 31 0.0011 24.8 6.3 83 55-141 9-97 (143)
288 3hv2_A Response regulator/HD d 54.8 24 0.00082 26.1 5.7 82 55-141 15-99 (153)
289 1srr_A SPO0F, sporulation resp 54.4 41 0.0014 23.5 6.8 81 56-141 5-88 (124)
290 2jba_A Phosphate regulon trans 54.0 38 0.0013 23.7 6.5 80 56-140 4-88 (127)
291 1dbw_A Transcriptional regulat 53.6 44 0.0015 23.5 6.8 81 56-141 5-88 (126)
292 2fz5_A Flavodoxin; alpha/beta 53.6 22 0.00075 25.9 5.2 75 58-135 6-87 (137)
293 3lrt_A Ribose-phosphate pyroph 53.6 62 0.0021 27.6 8.5 76 59-136 3-85 (286)
294 2bhu_A Maltooligosyltrehalose 52.7 30 0.001 33.0 7.1 70 63-133 141-211 (602)
295 3i9v_3 NADH-quinone oxidoreduc 52.7 32 0.0011 34.1 7.4 115 41-157 324-473 (783)
296 2pln_A HP1043, response regula 52.4 45 0.0016 23.8 6.8 78 55-140 19-98 (137)
297 3grc_A Sensor protein, kinase; 52.3 29 0.00098 25.0 5.7 82 55-140 7-92 (140)
298 3nhm_A Response regulator; pro 52.1 33 0.0011 24.3 6.0 82 55-141 5-90 (133)
299 1gpw_B Amidotransferase HISH; 51.9 46 0.0016 26.3 7.2 70 56-136 2-85 (201)
300 3pkz_A Recombinase SIN; small 51.8 11 0.00036 27.7 3.1 40 98-137 52-94 (124)
301 2rjn_A Response regulator rece 51.6 36 0.0012 25.0 6.3 80 56-140 9-91 (154)
302 3t6k_A Response regulator rece 50.7 37 0.0013 24.4 6.1 94 56-154 6-109 (136)
303 1ua7_A Alpha-amylase; beta-alp 50.4 25 0.00085 31.8 5.9 77 56-133 6-93 (422)
304 2gm5_A Transposon gamma-delta 50.3 13 0.00046 27.8 3.4 39 99-137 54-95 (139)
305 2aef_A Calcium-gated potassium 50.2 44 0.0015 27.0 7.0 80 55-140 10-110 (234)
306 3u31_A SIR2A, transcriptional 50.0 56 0.0019 27.9 7.7 81 38-127 202-282 (290)
307 2wc7_A Alpha amylase, catalyti 49.9 19 0.00065 33.2 5.2 71 61-133 51-121 (488)
308 3eag_A UDP-N-acetylmuramate:L- 49.7 75 0.0026 27.4 8.8 31 55-87 5-35 (326)
309 1k68_A Phytochrome response re 49.6 56 0.0019 23.1 6.9 82 55-140 3-97 (140)
310 1wza_A Alpha-amylase A; hydrol 49.5 34 0.0012 31.5 6.8 70 62-133 23-100 (488)
311 1g94_A Alpha-amylase; beta-alp 49.4 23 0.0008 32.2 5.6 77 56-133 3-83 (448)
312 3f6r_A Flavodoxin; FMN binding 49.4 56 0.0019 24.1 7.0 66 58-126 6-80 (148)
313 1e5d_A Rubredoxin\:oxygen oxid 49.4 90 0.0031 27.5 9.5 81 55-135 253-343 (402)
314 1xhc_A NADH oxidase /nitrite r 49.0 76 0.0026 27.8 8.8 69 42-132 132-201 (367)
315 2b4a_A BH3024; flavodoxin-like 48.9 63 0.0022 23.0 7.2 83 55-141 16-102 (138)
316 1eiw_A Hypothetical protein MT 48.9 71 0.0024 22.9 8.0 69 58-138 7-77 (111)
317 1yio_A Response regulatory pro 48.8 44 0.0015 26.1 6.7 81 56-141 6-89 (208)
318 3edf_A FSPCMD, cyclomaltodextr 48.7 42 0.0014 31.9 7.5 72 61-133 143-217 (601)
319 3pki_A NAD-dependent deacetyla 48.5 17 0.00059 32.1 4.2 54 99-153 204-257 (355)
320 2lpm_A Two-component response 48.2 3.8 0.00013 30.3 -0.0 73 67-142 19-93 (123)
321 3f6c_A Positive transcription 48.2 51 0.0018 23.3 6.5 88 65-154 10-105 (134)
322 3trh_A Phosphoribosylaminoimid 47.8 81 0.0028 24.5 7.5 60 56-135 8-68 (169)
323 2guy_A Alpha-amylase A; (beta- 47.4 40 0.0014 30.9 6.9 70 63-133 40-116 (478)
324 1m7x_A 1,4-alpha-glucan branch 47.4 55 0.0019 31.3 8.0 70 64-133 153-223 (617)
325 2zxr_A Single-stranded DNA spe 47.2 2E+02 0.007 27.7 12.9 94 42-140 61-163 (666)
326 3gk5_A Uncharacterized rhodane 46.5 22 0.00074 25.1 4.0 45 42-89 44-88 (108)
327 2g1u_A Hypothetical protein TM 46.4 88 0.003 23.3 9.4 30 55-87 20-49 (155)
328 3flh_A Uncharacterized protein 46.3 12 0.00041 27.2 2.6 47 41-88 59-105 (124)
329 3jte_A Response regulator rece 46.3 63 0.0021 23.2 6.8 95 56-154 5-108 (143)
330 2pr7_A Haloacid dehalogenase/e 45.8 23 0.00077 25.5 4.1 27 115-141 21-47 (137)
331 4b4k_A N5-carboxyaminoimidazol 45.7 58 0.002 25.6 6.4 58 57-134 26-83 (181)
332 3h1g_A Chemotaxis protein CHEY 45.5 47 0.0016 23.5 5.9 82 56-141 7-94 (129)
333 3l9w_A Glutathione-regulated p 45.4 66 0.0023 29.0 7.9 80 55-139 5-106 (413)
334 2pl1_A Transcriptional regulat 45.4 42 0.0014 23.2 5.5 80 56-140 2-84 (121)
335 1ht6_A AMY1, alpha-amylase iso 45.4 16 0.00055 32.8 3.8 66 66-133 21-87 (405)
336 1ma3_A SIR2-AF2, transcription 45.3 27 0.00093 29.2 4.9 55 99-154 181-235 (253)
337 4grd_A N5-CAIR mutase, phospho 44.9 68 0.0023 25.0 6.6 61 56-136 15-76 (173)
338 3cgb_A Pyridine nucleotide-dis 44.5 1.3E+02 0.0046 27.3 10.1 60 52-132 185-245 (480)
339 3hdv_A Response regulator; PSI 44.5 40 0.0014 24.0 5.4 97 55-154 8-112 (136)
340 3ruf_A WBGU; rossmann fold, UD 44.4 1.5E+02 0.0051 25.3 11.3 31 55-87 26-56 (351)
341 2f00_A UDP-N-acetylmuramate--L 44.4 59 0.002 30.0 7.6 31 55-87 20-50 (491)
342 1m2k_A Silent information regu 44.0 33 0.0011 28.6 5.2 54 100-154 176-229 (249)
343 3ecs_A Translation initiation 43.9 53 0.0018 28.5 6.6 37 118-154 162-198 (315)
344 1ti6_A Pyrogallol hydroxytrans 43.9 34 0.0012 34.3 6.2 57 100-157 207-271 (875)
345 4aee_A Alpha amylase, catalyti 43.9 25 0.00087 34.2 5.1 71 61-133 260-330 (696)
346 3lte_A Response regulator; str 43.9 49 0.0017 23.3 5.8 79 55-137 7-89 (132)
347 4e7p_A Response regulator; DNA 43.6 91 0.0031 22.6 8.3 95 56-154 22-125 (150)
348 2aaa_A Alpha-amylase; glycosid 43.6 45 0.0015 30.6 6.6 70 63-133 40-116 (484)
349 1y80_A Predicted cobalamin bin 43.5 37 0.0013 27.2 5.4 82 55-138 89-180 (210)
350 3cg0_A Response regulator rece 43.2 39 0.0013 24.1 5.2 82 55-141 10-95 (140)
351 3mvn_A UDP-N-acetylmuramate:L- 42.9 24 0.00083 27.1 4.0 8 130-137 140-147 (163)
352 3dfz_A SIRC, precorrin-2 dehyd 42.9 31 0.001 28.3 4.7 69 56-126 93-162 (223)
353 3hdg_A Uncharacterized protein 42.4 38 0.0013 24.2 4.9 81 56-140 9-91 (137)
354 1yc5_A NAD-dependent deacetyla 42.4 28 0.00095 29.0 4.5 55 99-154 178-232 (246)
355 2z1k_A (NEO)pullulanase; hydro 42.4 34 0.0012 31.3 5.6 70 62-133 46-115 (475)
356 2qzj_A Two-component response 42.2 40 0.0014 24.2 5.1 80 56-140 6-87 (136)
357 3rht_A (gatase1)-like protein; 42.2 84 0.0029 26.3 7.5 81 55-137 5-88 (259)
358 3c3m_A Response regulator rece 42.1 60 0.0021 23.2 6.1 79 56-139 5-88 (138)
359 1jbe_A Chemotaxis protein CHEY 42.0 76 0.0026 22.1 6.6 81 56-141 6-92 (128)
360 3ry7_A Ribokinase; transferase 41.7 1.5E+02 0.0053 24.7 10.4 116 37-155 118-242 (304)
361 1wiw_A Glucose-6-phosphate iso 41.6 1.6E+02 0.0056 25.0 11.2 138 25-193 129-279 (290)
362 1jae_A Alpha-amylase; glycosid 41.5 41 0.0014 30.8 6.0 78 55-133 10-93 (471)
363 2cdu_A NADPH oxidase; flavoenz 41.4 1.3E+02 0.0045 27.0 9.4 43 43-89 139-181 (452)
364 2hmc_A AGR_L_411P, dihydrodipi 41.4 40 0.0014 29.6 5.6 83 36-137 42-127 (344)
365 2dh2_A 4F2 cell-surface antige 40.9 44 0.0015 30.2 6.0 69 62-133 32-100 (424)
366 1mb3_A Cell division response 40.8 44 0.0015 23.2 5.0 81 56-141 3-88 (124)
367 2zay_A Response regulator rece 40.8 29 0.001 25.2 4.1 94 56-154 10-113 (147)
368 1eu1_A Dimethyl sulfoxide redu 40.7 43 0.0015 33.0 6.3 57 100-157 176-243 (780)
369 3hn7_A UDP-N-acetylmuramate-L- 40.6 74 0.0025 29.6 7.6 34 51-87 17-50 (524)
370 3a10_A Response regulator; pho 40.6 44 0.0015 22.9 4.9 80 56-140 3-85 (116)
371 4ici_A Putative flavoprotein; 40.5 83 0.0028 24.2 6.8 22 57-78 19-40 (171)
372 3orq_A N5-carboxyaminoimidazol 40.3 59 0.002 28.7 6.7 39 116-154 23-61 (377)
373 2o1e_A YCDH; alpha-beta protei 40.0 23 0.00078 30.7 3.7 33 98-132 234-266 (312)
374 1p3d_A UDP-N-acetylmuramate--a 39.7 58 0.002 29.9 6.7 80 55-139 19-128 (475)
375 1tif_A IF3-N, translation init 39.6 63 0.0021 21.6 5.0 30 242-271 13-42 (78)
376 3k1d_A 1,4-alpha-glucan-branch 39.5 71 0.0024 31.2 7.5 69 65-133 262-331 (722)
377 3aek_A Light-independent proto 39.5 80 0.0027 28.6 7.5 73 55-134 184-256 (437)
378 2bc0_A NADH oxidase; flavoprot 39.2 1.3E+02 0.0044 27.5 9.1 35 51-89 192-226 (490)
379 3lp6_A Phosphoribosylaminoimid 39.1 1.3E+02 0.0045 23.4 7.5 59 56-134 9-68 (174)
380 2pbz_A Hypothetical protein; N 39.0 42 0.0014 29.2 5.3 45 106-153 5-52 (320)
381 1id1_A Putative potassium chan 39.0 55 0.0019 24.4 5.5 31 55-88 4-34 (153)
382 3lq1_A 2-succinyl-5-enolpyruvy 38.9 1.4E+02 0.0047 28.1 9.3 96 39-138 210-324 (578)
383 3hwr_A 2-dehydropantoate 2-red 38.9 47 0.0016 28.5 5.7 83 55-140 20-125 (318)
384 2we8_A Xanthine dehydrogenase; 38.8 1.3E+02 0.0044 26.8 8.5 34 55-91 205-238 (386)
385 3don_A Shikimate dehydrogenase 38.6 67 0.0023 27.2 6.4 31 55-88 118-149 (277)
386 4dim_A Phosphoribosylglycinami 38.6 35 0.0012 30.3 4.9 47 107-155 11-58 (403)
387 3dhn_A NAD-dependent epimerase 38.6 1.4E+02 0.0049 23.4 8.6 80 55-136 5-112 (227)
388 1xhf_A DYE resistance, aerobic 38.6 63 0.0021 22.4 5.5 81 56-141 5-87 (123)
389 1zgz_A Torcad operon transcrip 38.5 59 0.002 22.5 5.4 81 56-141 4-86 (122)
390 3c85_A Putative glutathione-re 38.4 1.3E+02 0.0045 22.9 9.3 78 55-137 40-141 (183)
391 5nul_A Flavodoxin; electron tr 38.2 26 0.00089 25.7 3.4 50 104-154 2-55 (138)
392 3f6r_A Flavodoxin; FMN binding 38.0 28 0.00096 25.9 3.6 49 104-152 5-56 (148)
393 1gdt_A GD resolvase, protein ( 37.8 29 0.00098 27.2 3.7 39 99-137 55-96 (183)
394 3fni_A Putative diflavin flavo 37.7 22 0.00077 27.1 3.0 78 58-136 9-95 (159)
395 1ys7_A Transcriptional regulat 37.6 73 0.0025 25.3 6.4 81 56-141 9-92 (233)
396 4e2x_A TCAB9; kijanose, tetron 37.4 1.3E+02 0.0045 26.7 8.6 89 41-133 306-408 (416)
397 3m07_A Putative alpha amylase; 37.4 73 0.0025 30.4 7.1 70 63-133 151-221 (618)
398 3kuu_A Phosphoribosylaminoimid 37.3 1E+02 0.0035 24.0 6.6 59 56-134 14-73 (174)
399 3pdw_A Uncharacterized hydrola 37.3 23 0.0008 29.2 3.3 33 114-146 24-56 (266)
400 2nuw_A 2-keto-3-deoxygluconate 37.3 63 0.0022 27.4 6.1 84 36-137 15-100 (288)
401 3qgm_A P-nitrophenyl phosphata 37.1 24 0.00083 29.1 3.4 32 114-145 26-57 (268)
402 3s5o_A 4-hydroxy-2-oxoglutarat 37.0 87 0.003 26.9 7.0 85 37-136 31-117 (307)
403 3sc6_A DTDP-4-dehydrorhamnose 37.0 25 0.00085 29.4 3.5 80 56-137 7-107 (287)
404 1tvm_A PTS system, galactitol- 37.0 64 0.0022 23.0 5.2 27 57-83 25-53 (113)
405 2hna_A Protein MIOC, flavodoxi 36.9 30 0.001 25.8 3.6 65 57-126 5-75 (147)
406 2hqr_A Putative transcriptiona 36.8 1.1E+02 0.0036 24.1 7.3 85 65-154 9-99 (223)
407 1lss_A TRK system potassium up 36.8 1.1E+02 0.0039 21.7 7.5 29 56-87 6-34 (140)
408 2ehh_A DHDPS, dihydrodipicolin 36.5 70 0.0024 27.2 6.3 86 36-136 16-103 (294)
409 2r91_A 2-keto-3-deoxy-(6-phosp 36.4 97 0.0033 26.2 7.1 84 36-137 14-99 (286)
410 2vns_A Metalloreductase steap3 36.1 40 0.0014 27.1 4.5 30 55-87 29-58 (215)
411 1kgs_A DRRD, DNA binding respo 36.0 71 0.0024 25.2 6.0 80 56-140 4-86 (225)
412 2q5c_A NTRC family transcripti 35.7 23 0.00079 28.3 2.9 49 42-91 82-130 (196)
413 3kzh_A Probable sugar kinase; 35.7 2E+02 0.007 24.4 10.0 114 37-154 121-244 (328)
414 2ywl_A Thioredoxin reductase r 35.6 1.4E+02 0.0048 22.5 8.6 31 56-89 3-33 (180)
415 1efp_A ETF, protein (electron 35.5 82 0.0028 27.1 6.5 96 50-152 189-294 (307)
416 3zq4_A Ribonuclease J 1, RNAse 35.3 1.9E+02 0.0066 27.0 9.6 35 99-133 321-357 (555)
417 1j8f_A SIRT2, sirtuin 2, isofo 35.2 20 0.00067 31.3 2.5 53 18-70 6-60 (323)
418 3dhu_A Alpha-amylase; structur 35.2 25 0.00086 32.0 3.4 70 63-133 27-102 (449)
419 3nbm_A PTS system, lactose-spe 35.1 81 0.0028 22.4 5.4 77 56-137 9-87 (108)
420 3nkl_A UDP-D-quinovosamine 4-d 35.1 1.1E+02 0.0036 22.3 6.5 28 55-85 5-33 (141)
421 3gpi_A NAD-dependent epimerase 35.1 90 0.0031 25.8 6.8 79 55-136 4-109 (286)
422 3on5_A BH1974 protein; structu 35.0 98 0.0033 27.4 7.0 79 55-138 200-297 (362)
423 1efv_A Electron transfer flavo 35.0 97 0.0033 26.8 6.9 96 50-152 194-299 (315)
424 3ca8_A Protein YDCF; two domai 35.0 1.3E+02 0.0046 25.1 7.7 40 101-140 113-156 (266)
425 3ggo_A Prephenate dehydrogenas 35.0 60 0.002 27.9 5.6 30 55-87 34-65 (314)
426 1ccw_A Protein (glutamate muta 34.9 56 0.0019 24.2 4.8 82 56-138 5-94 (137)
427 3rqi_A Response regulator prot 34.8 68 0.0023 24.5 5.6 94 56-154 9-110 (184)
428 3cfy_A Putative LUXO repressor 34.8 50 0.0017 23.7 4.5 81 56-141 6-89 (137)
429 2fq6_A Cystathionine beta-lyas 34.6 1.8E+02 0.0063 25.9 9.1 75 77-154 143-229 (415)
430 1hvx_A Alpha-amylase; hydrolas 34.6 86 0.0029 29.0 7.0 65 66-133 24-100 (515)
431 3lxd_A FAD-dependent pyridine 34.5 2.4E+02 0.0081 24.8 9.9 71 42-132 140-212 (415)
432 3vgf_A Malto-oligosyltrehalose 34.4 69 0.0023 30.1 6.4 70 63-133 116-186 (558)
433 3crn_A Response regulator rece 34.4 1.2E+02 0.004 21.3 6.6 81 56-141 5-88 (132)
434 3q2o_A Phosphoribosylaminoimid 34.3 79 0.0027 27.9 6.5 38 116-153 25-62 (389)
435 1w3i_A EDA, 2-keto-3-deoxy glu 34.3 1.1E+02 0.0038 25.9 7.2 84 36-137 15-100 (293)
436 2a9v_A GMP synthase; structura 34.1 75 0.0026 25.4 5.8 76 55-136 14-93 (212)
437 1iug_A Putative aspartate amin 34.1 2E+02 0.0067 24.2 9.0 90 41-133 62-158 (352)
438 2v3a_A Rubredoxin reductase; a 34.0 2.3E+02 0.008 24.6 9.7 37 48-88 140-176 (384)
439 2r0q_C Putative transposon TN5 33.9 28 0.00096 27.9 3.2 40 98-137 52-94 (209)
440 3dqp_A Oxidoreductase YLBE; al 33.9 1.5E+02 0.0051 23.2 7.7 79 56-136 2-106 (219)
441 4gbj_A 6-phosphogluconate dehy 33.8 1.6E+02 0.0054 25.0 8.1 30 55-87 6-35 (297)
442 2dc1_A L-aspartate dehydrogena 33.8 1.2E+02 0.0041 24.5 7.2 75 56-136 2-82 (236)
443 1dc7_A NTRC, nitrogen regulati 33.8 29 0.001 24.1 3.0 81 56-140 5-87 (124)
444 1u11_A PURE (N5-carboxyaminoim 33.8 1.5E+02 0.005 23.4 7.0 58 56-133 23-81 (182)
445 1o97_D Electron transferring f 33.8 1.2E+02 0.0041 26.2 7.3 96 50-152 199-305 (320)
446 2i2x_B MTAC, methyltransferase 33.6 59 0.002 27.1 5.2 76 55-130 124-204 (258)
447 1vhq_A Enhancing lycopene bios 33.6 1.5E+02 0.0052 23.9 7.7 82 56-137 8-142 (232)
448 3klj_A NAD(FAD)-dependent dehy 33.6 1.8E+02 0.006 25.6 8.7 46 41-90 134-179 (385)
449 2b8t_A Thymidine kinase; deoxy 33.5 1.9E+02 0.0065 23.4 8.2 32 56-87 14-47 (223)
450 2yvq_A Carbamoyl-phosphate syn 33.4 98 0.0033 23.1 6.0 84 40-132 36-129 (143)
451 2yxg_A DHDPS, dihydrodipicolin 33.4 68 0.0023 27.2 5.7 86 36-136 16-103 (289)
452 3pdi_B Nitrogenase MOFE cofact 33.4 96 0.0033 28.3 7.0 76 55-135 170-266 (458)
453 1ea9_C Cyclomaltodextrinase; h 33.0 31 0.0011 32.8 3.7 69 63-133 169-237 (583)
454 3cz5_A Two-component response 33.0 1.4E+02 0.0047 21.6 7.2 96 56-155 7-111 (153)
455 1pq4_A Periplasmic binding pro 32.9 33 0.0011 29.2 3.6 31 111-141 220-250 (291)
456 1kjq_A GART 2, phosphoribosylg 32.9 1.3E+02 0.0043 26.4 7.7 42 110-153 18-59 (391)
457 2wkj_A N-acetylneuraminate lya 32.9 67 0.0023 27.5 5.6 86 36-136 27-114 (303)
458 2pcq_A Putative dihydrodipicol 32.9 1.1E+02 0.0036 25.9 6.8 83 36-137 14-97 (283)
459 1tmy_A CHEY protein, TMY; chem 32.8 1.2E+02 0.004 20.7 7.0 80 56-140 4-87 (120)
460 2obb_A Hypothetical protein; s 32.7 30 0.001 26.1 2.9 26 114-139 26-51 (142)
461 4aay_A AROA; oxidoreductase, r 32.6 1.1E+02 0.0039 30.4 7.8 55 127-198 273-335 (845)
462 3bh4_A Alpha-amylase; calcium, 32.5 88 0.003 28.6 6.7 65 66-133 21-97 (483)
463 3epr_A Hydrolase, haloacid deh 32.4 29 0.00098 28.7 3.1 31 115-145 24-54 (264)
464 2gqw_A Ferredoxin reductase; f 32.4 1.4E+02 0.0049 26.4 8.0 35 52-90 144-178 (408)
465 1ma3_A SIR2-AF2, transcription 32.4 32 0.0011 28.7 3.4 30 41-70 3-32 (253)
466 1wpc_A Glucan 1,4-alpha-maltoh 32.3 90 0.0031 28.6 6.7 65 66-133 25-101 (485)
467 1pj3_A NAD-dependent malic enz 32.2 1.2E+02 0.0043 28.4 7.4 26 55-80 285-311 (564)
468 1v59_A Dihydrolipoamide dehydr 32.2 1.4E+02 0.0048 27.0 8.1 33 55-90 184-216 (478)
469 3gi1_A LBP, laminin-binding pr 32.2 20 0.00068 30.6 2.0 28 114-141 214-241 (286)
470 1ud2_A Amylase, alpha-amylase; 32.1 89 0.0031 28.5 6.7 65 66-133 23-99 (480)
471 3k2t_A LMO2511 protein; lister 32.1 61 0.0021 20.1 3.7 34 226-259 11-44 (57)
472 1ytl_A Acetyl-COA decarboxylas 32.1 64 0.0022 25.2 4.8 44 42-86 23-67 (174)
473 3ax6_A Phosphoribosylaminoimid 32.0 1.3E+02 0.0045 26.2 7.6 38 116-153 12-49 (380)
474 4e5v_A Putative THUA-like prot 32.0 2.3E+02 0.0078 23.8 9.5 81 56-137 6-95 (281)
475 3uj3_X DNA-invertase; helix-tu 31.9 20 0.00069 28.4 1.9 41 96-136 49-92 (193)
476 1k66_A Phytochrome response re 31.9 62 0.0021 23.2 4.7 83 55-141 7-105 (149)
477 1nhp_A NADH peroxidase; oxidor 31.8 1.8E+02 0.0063 26.0 8.7 34 52-89 148-181 (447)
478 1xky_A Dihydrodipicolinate syn 31.8 81 0.0028 27.0 5.9 86 36-136 28-115 (301)
479 2ew2_A 2-dehydropantoate 2-red 31.8 68 0.0023 27.0 5.5 29 56-87 5-33 (316)
480 2a9o_A Response regulator; ess 31.8 68 0.0023 21.9 4.7 81 56-141 3-85 (120)
481 2qr3_A Two-component system re 31.7 28 0.00097 25.0 2.7 81 56-140 5-92 (140)
482 3ucq_A Amylosucrase; thermosta 31.6 50 0.0017 31.8 5.0 67 66-133 111-179 (655)
483 3n0r_A Response regulator; sig 31.5 1.1E+02 0.0036 25.8 6.6 78 56-138 162-243 (286)
484 1f4p_A Flavodoxin; electron tr 31.4 51 0.0017 24.3 4.1 51 104-154 4-58 (147)
485 1xpj_A Hypothetical protein; s 31.4 53 0.0018 23.7 4.1 28 113-140 25-52 (126)
486 1xmp_A PURE, phosphoribosylami 31.4 1.3E+02 0.0046 23.3 6.3 59 56-134 14-72 (170)
487 3hix_A ALR3790 protein; rhodan 31.4 72 0.0024 22.1 4.7 38 48-88 47-85 (106)
488 4aef_A Neopullulanase (alpha-a 31.4 69 0.0024 30.7 5.9 71 61-133 234-304 (645)
489 3ib6_A Uncharacterized protein 31.1 42 0.0014 26.1 3.7 27 113-139 35-61 (189)
490 3l21_A DHDPS, dihydrodipicolin 31.1 87 0.003 26.8 6.0 86 37-137 32-119 (304)
491 3fg2_P Putative rubredoxin red 31.0 2.2E+02 0.0074 25.0 8.9 44 42-89 131-174 (404)
492 1gmx_A GLPE protein; transfera 30.9 71 0.0024 22.1 4.6 47 39-88 44-91 (108)
493 3a5f_A Dihydrodipicolinate syn 30.8 89 0.003 26.5 6.0 85 38-137 19-105 (291)
494 3nyt_A Aminotransferase WBPE; 30.6 1.5E+02 0.0051 25.5 7.7 29 104-132 126-154 (367)
495 1ji1_A Alpha-amylase I; beta/a 30.6 1.1E+02 0.0038 29.2 7.3 69 63-133 188-261 (637)
496 2p9j_A Hypothetical protein AQ 30.6 47 0.0016 24.8 3.8 29 114-142 38-66 (162)
497 1o0s_A NAD-ME, NAD-dependent m 30.4 1.2E+02 0.0041 28.7 7.0 27 55-81 321-348 (605)
498 2q9u_A A-type flavoprotein; fl 30.4 68 0.0023 28.5 5.5 79 57-135 260-348 (414)
499 3aml_A OS06G0726400 protein; s 30.4 1E+02 0.0035 30.2 7.0 68 66-133 201-269 (755)
500 3l8h_A Putative haloacid dehal 30.4 34 0.0012 26.1 3.0 25 114-138 29-53 (179)
No 1
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=100.00 E-value=1.5e-32 Score=231.38 Aligned_cols=195 Identities=28% Similarity=0.519 Sum_probs=176.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccc
Q 019775 14 KVSENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALH 93 (336)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~ 93 (336)
.+..++++++++.+.++++++.+.++.+.++++++.|.+++++||++|.|.|+.+|.+++++|.++|+++..+++.+.+.
T Consensus 5 ~~~~~i~~~~~~~~~~~l~~t~~~l~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~ 84 (201)
T 3fxa_A 5 QAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVH 84 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHSCHHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHh
Confidence 35568899999999999999999999999999999999992299999999999999999999999999999999888777
Q ss_pred cccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHH
Q 019775 94 GDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQM 173 (336)
Q Consensus 94 ~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~ 173 (336)
.....++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||++|.++...+...+...++.|.++++
T Consensus 85 ~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~e~~~~~~~~~~s~~~~l 164 (201)
T 3fxa_A 85 GTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVI 164 (201)
T ss_dssp TGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCCSCCCSTTSCSCHHHHHHHH
T ss_pred hhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcCCCccccccCCCchHHHHHHH
Confidence 77788999999999999999999999999999999999999999999999999999999987654455667899999999
Q ss_pred HHHHHHHHHHHhhcCCChHHHhhcCCCCchhhhhh
Q 019775 174 VFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLI 208 (336)
Q Consensus 174 ~l~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
+++|+|+..++++++.++++++++||.|.+++.++
T Consensus 165 ~~~d~L~~~l~~~~g~~~~~~~~~H~~g~~g~~l~ 199 (201)
T 3fxa_A 165 ASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLL 199 (201)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHCCCCC------
T ss_pred HHHHHHHHHHHHhcCCCHHHHhhcCCCcHHHHHhh
Confidence 99999999999999999999999999999998754
No 2
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=100.00 E-value=4.4e-32 Score=231.30 Aligned_cols=198 Identities=26% Similarity=0.427 Sum_probs=176.1
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHc-----CCCeEEEEeccchHHHHHHHHHHHHhcCCeee
Q 019775 10 LLPHKVSENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLK-----CRGTIFFTGVGKSGFVANKISQTLISLGIKSG 84 (336)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~-----a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~ 84 (336)
+.+..+..+.++++.+...+.++++.+.++.+.++++++.|.+ + ++||++|.|.|+.+|.+++++|.++|+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~t~~~ld~~~i~~~~~~i~~~a~~~a-~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~ 89 (220)
T 3etn_A 11 HHENLYFQGMIESIQELLQKEAQAVLNIPVTDAYEKAVELIVEQIHRKK-GKLVTSGMGKAGQIAMNIATTFCSTGIPSV 89 (220)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTCCCCTHHHHHHHHHHHHTTTTC-CCEEEECSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhHhhccC-CEEEEEEecHHHHHHHHHHHHHHhcCCcEE
Confidence 3444567788999999999999999999999999999999999 8 699999999999999999999999999999
Q ss_pred ecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH--cCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCC
Q 019775 85 FLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA--KGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFD 162 (336)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~--~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~ 162 (336)
.+++.+.+......++++|++|+||+||++++++++++.||+ +|+++|+||++.++|++++||++|.++...+..+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~~~~~e~~~~~ 169 (220)
T 3etn_A 90 FLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLG 169 (220)
T ss_dssp ECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEECCCCCCCSTTS
T ss_pred EeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEcCCCccccccc
Confidence 999888888778889999999999999999999999999999 999999999999999999999999999876544566
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhcCCChHHHhhcCCCCchhhhhh
Q 019775 163 LAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLI 208 (336)
Q Consensus 163 ~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
..++.|.+++++++|+|+..++.+++.+++++.++||.|.+++.++
T Consensus 170 ~~~~~S~~~~l~lld~L~~~l~~~~g~~~~~~~~~H~~g~~g~~~~ 215 (220)
T 3etn_A 170 MTPTTSTTVMTVIGDILVVQTMKRTEFTIEEYSKRHHGGYLGEKSR 215 (220)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHHTCCHHHHHTTBCGGGC-----
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhcCCCcHHHHHHH
Confidence 6889999999999999999999999999999999999999999854
No 3
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=99.96 E-value=6.2e-29 Score=206.93 Aligned_cols=168 Identities=14% Similarity=0.141 Sum_probs=156.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecC-Ccccccc
Q 019775 16 SENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLN-PLDALHG 94 (336)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~-~~~~~~~ 94 (336)
..++++++++.+.++++++.+.++.+.++++++.|.++ ++||++|.|.|+.+|.+++++|.++|+++..++ +...+..
T Consensus 2 ~~~i~~~~~~~~~~~l~~t~~~l~~~~l~~~~~~i~~a-~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~ 80 (187)
T 3sho_A 2 RQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAICRA-DHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTI 80 (187)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHC-SEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhC-CEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHH
Confidence 46788999999999999999999999999999999999 699999999999999999999999999999998 5666666
Q ss_pred ccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHH
Q 019775 95 DIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMV 174 (336)
Q Consensus 95 ~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~ 174 (336)
....++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||+++.++.+.. .++.|.+++++
T Consensus 81 ~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~------~~~~S~~~~~~ 154 (187)
T 3sho_A 81 TLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAATRGV------GHSLSPVGLIA 154 (187)
T ss_dssp HHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECCCCCS------SSSCCCHHHHH
T ss_pred HHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEecCCCC------cccccHhHHHH
Confidence 677899999999999999999999999999999999999999999999999999999998755 45788999999
Q ss_pred HHHHHHHHHHhhcCCC
Q 019775 175 FGDTVAIAMMGARNLT 190 (336)
Q Consensus 175 l~d~l~~~~~~~~~~~ 190 (336)
++|+|+..+..+++..
T Consensus 155 l~d~L~~~~~~~~~~~ 170 (187)
T 3sho_A 155 VVNLLLAEIAVREPER 170 (187)
T ss_dssp HHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHhCcHH
Confidence 9999999999887643
No 4
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=99.96 E-value=1.7e-28 Score=203.49 Aligned_cols=173 Identities=27% Similarity=0.513 Sum_probs=157.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccc
Q 019775 14 KVSENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALH 93 (336)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~ 93 (336)
.+..++++++++.+.++++++.+.++. .++++++.|.+++++||++|.|.|+.+|.+++++|.++|+++..+++.+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~l~~t~~~~~~-~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~ 88 (183)
T 2xhz_A 10 FDFQQAGKEVLAIERECLAELDQYINQ-NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAH 88 (183)
T ss_dssp -CHHHHHHHHHHHHHHHHTTGGGTSSH-HHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhh
Confidence 366789999999999999999999997 9999999999983399999999999999999999999999999998777766
Q ss_pred cccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHH
Q 019775 94 GDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQM 173 (336)
Q Consensus 94 ~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~ 173 (336)
.....++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||++|.++.+.+.......++.|.++++
T Consensus 89 ~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~~~~e~~~~~~~~~~S~~~~~ 168 (183)
T 2xhz_A 89 GDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATL 168 (183)
T ss_dssp HTSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECCCSCCSSTTCSSCCHHHHHHH
T ss_pred hhhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeCCCccccccCCCcchHHHHHH
Confidence 66678899999999999999999999999999999999999999999999999999999986653345567899999999
Q ss_pred HHHHHHHHHHHhhc
Q 019775 174 VFGDTVAIAMMGAR 187 (336)
Q Consensus 174 ~l~d~l~~~~~~~~ 187 (336)
+++|+|+..+..++
T Consensus 169 ~~~d~L~~~~~~~~ 182 (183)
T 2xhz_A 169 VMGDALAVALLKAR 182 (183)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 5
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=99.96 E-value=5.7e-28 Score=200.91 Aligned_cols=175 Identities=18% Similarity=0.313 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCC
Q 019775 20 LLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGIL 99 (336)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 99 (336)
++++++...+.++++.+.++.+.++++++.|.++ ++||++|.|.|+.+|.+++++|.++|+++..+.+.. ...+
T Consensus 4 ~~~~~~~~~~~l~~t~~~l~~~~i~~~~~~i~~a-~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~-----~~~~ 77 (186)
T 1m3s_A 4 TTEYVAEILNELHNSAAYISNEEADQLADHILSS-HQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEIL-----TPPL 77 (186)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHC-SCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTT-----CCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHHHHHHHhcCCeEEEeCccc-----ccCC
Confidence 4568889999999999999999999999999999 699999999999999999999999999999986652 4678
Q ss_pred CCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCC---CC-CCChhHHH--HHH
Q 019775 100 SSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCP---FD-LAPVTSTA--IQM 173 (336)
Q Consensus 100 ~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~---~~-~~~~~s~~--~~~ 173 (336)
+++|++|+||+||++++++++++.||++|+++|+||++.++|++++||++|.++...+... +. ..++.|.+ +++
T Consensus 78 ~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~~~~~~~~~~~~s~~~~~s~~~~~~~ 157 (186)
T 1m3s_A 78 AEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLL 157 (186)
T ss_dssp CTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEECSCCSCC-----CCCCSSTTHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEeCCccccCCCCcccccccCccHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999998765210 11 45788875 679
Q ss_pred HHHHHHHHHHHhhcCCChHHHhhcCCC
Q 019775 174 VFGDTVAIAMMGARNLTRDEYAANHPA 200 (336)
Q Consensus 174 ~l~d~l~~~~~~~~~~~~~~~~~~~~~ 200 (336)
+++|+|+..++.+++.+++++.++|++
T Consensus 158 ~~~d~L~~~~~~~~~~~~~~~~~~h~~ 184 (186)
T 1m3s_A 158 LFYDAVILKLMEKKGLDSETMFTHHAN 184 (186)
T ss_dssp HHHHHHHHHHHHHTTCCTTTCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHhccC
Confidence 999999999999999999999999986
No 6
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=99.96 E-value=3.2e-27 Score=198.46 Aligned_cols=180 Identities=24% Similarity=0.368 Sum_probs=158.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccccc
Q 019775 15 VSENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHG 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~ 94 (336)
...-...++++.+.+.++++.+.++.+.++++++.|.++ ++||++|.|.|..+|.+|+++|.++|+++..+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~i~~t~~~l~~~~l~~~~~~i~~a-~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~---- 83 (200)
T 1vim_A 9 GGHMSLLRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSA-RSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETV---- 83 (200)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHS-SCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTT----
T ss_pred cccchHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcC-CEEEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCcc----
Confidence 334456688999999999999999999999999999999 699999999999999999999999999999987642
Q ss_pred ccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCC-----CCChhHH
Q 019775 95 DIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFD-----LAPVTST 169 (336)
Q Consensus 95 ~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~-----~~~~~s~ 169 (336)
...++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||++|.++.+.+. ... ..+++|+
T Consensus 84 -~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~~~~~~~-~~~~~~~~~~~~~s~ 161 (200)
T 1vim_A 84 -TPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQ-ERDEILSQLAPLGTM 161 (200)
T ss_dssp -CCCCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCSSCTT-CCHHHHHHHSGGGHH
T ss_pred -ccCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEECCcccc-cCCcccccccccccH
Confidence 356889999999999999999999999999999999999999999999999999999987652 111 2367777
Q ss_pred H--HHHHHHHHHHHHHHhhcCCChHHHhhcCCCC
Q 019775 170 A--IQMVFGDTVAIAMMGARNLTRDEYAANHPAG 201 (336)
Q Consensus 170 ~--~~~~l~d~l~~~~~~~~~~~~~~~~~~~~~~ 201 (336)
+ ++++++|+|+..++.+.+.+.+++.+.|+.-
T Consensus 162 ~~~~~~~lld~L~~~~~~~~~~~~~~~~~~h~~l 195 (200)
T 1vim_A 162 FELTAMIFLDALVAEIMMQKHLTEKDLEARHAVL 195 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHSCCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHhhhhh
Confidence 4 6689999999999999988888888887764
No 7
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=99.95 E-value=2.4e-27 Score=196.09 Aligned_cols=173 Identities=24% Similarity=0.354 Sum_probs=157.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccccccc
Q 019775 17 ENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDI 96 (336)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~ 96 (336)
.++++++++...++++++.+.++.+.++++++.|.++ ++||++|.|.|+.+|.+++++|.++|+++..+++.. .
T Consensus 4 ~~~~~~~~~~~~~~i~~t~~~l~~~~i~~~~~~i~~a-~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~-----~ 77 (180)
T 1jeo_A 4 LEELDIVSNNILILKKFYTNDEWKNKLDSLIDRIIKA-KKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETT-----T 77 (180)
T ss_dssp CHHHHHHHHHHHGGGHHHHCHHHHHHHHHHHHHHHHC-SSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTT-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhC-CEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCc-----c
Confidence 4678899999999999999999999999999999999 699999999999999999999999999999986552 4
Q ss_pred CCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHH--HHHH
Q 019775 97 GILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTA--IQMV 174 (336)
Q Consensus 97 ~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~--~~~~ 174 (336)
..++++|++|+||+||++++++++++.||++|+++|+||++.++ ++++||+++.++.. + . ...++.|.+ ++++
T Consensus 78 ~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~~~~-~--~-~~~~~~s~~~~~~~~ 152 (180)
T 1jeo_A 78 PSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIPLEVK-K--S-KYLPMGTTFEETALI 152 (180)
T ss_dssp CCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEECCCC-C--B-TTBCTTHHHHHHHHH
T ss_pred ccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEeCCc-c--c-ccccchhHHHHHHHH
Confidence 56889999999999999999999999999999999999999999 99999999999883 3 1 446777775 6799
Q ss_pred HHHHHHHHHHhhcCCChHHHhhcCCC
Q 019775 175 FGDTVAIAMMGARNLTRDEYAANHPA 200 (336)
Q Consensus 175 l~d~l~~~~~~~~~~~~~~~~~~~~~ 200 (336)
++|+|+..+..+++.+++++.++|++
T Consensus 153 ~ld~L~~~~~~~~~~~~~~~~~~h~~ 178 (180)
T 1jeo_A 153 FLDLVIAEIMKRLNLDESEIIKRHCN 178 (180)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHhhCcc
Confidence 99999999999999999999988875
No 8
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=99.92 E-value=2.9e-24 Score=179.93 Aligned_cols=162 Identities=20% Similarity=0.258 Sum_probs=140.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCh---hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHH------hcCCeeeecC
Q 019775 17 ENTLLDLFKSQQDHLNYFFQHLSL---PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLI------SLGIKSGFLN 87 (336)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~---~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~------~~g~~~~~~~ 87 (336)
.+.++++++.+.++++++.+.+++ +.++++++.|.++ ++||++|.|.|+.+|.+++++|. +.|+++..++
T Consensus 2 ~~~~~~~~~~~~~~l~~t~~~l~~~i~~~~~~~~~~i~~a-~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~ 80 (196)
T 2yva_A 2 QERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNG-NKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALN 80 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTT-CCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESS
T ss_pred hhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CEEEEEeCchhhHHHHHHHHHHhccccccCCCCceEeec
Confidence 457788999999999999999998 8999999999999 69999999999999999999999 8899998876
Q ss_pred C-----------cccccc----ccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccc---cCEE
Q 019775 88 P-----------LDALHG----DIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAV---CDMN 149 (336)
Q Consensus 88 ~-----------~~~~~~----~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~---ad~~ 149 (336)
+ ...... ....++++|++|+||+||++++++++++.||++|+++|+||++.++|++++ ||++
T Consensus 81 ~~~~~~~a~~~d~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~ 160 (196)
T 2yva_A 81 TDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE 160 (196)
T ss_dssp CCHHHHHHHTTSTTGGGHHHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEE
T ss_pred CchHHHHHHhcCCCHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEE
Confidence 2 221110 024578999999999999999999999999999999999999999999999 9999
Q ss_pred EEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhc
Q 019775 150 VHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGAR 187 (336)
Q Consensus 150 i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~ 187 (336)
|.++.... + ....++++++|+|+..+..+.
T Consensus 161 l~~~~~~~------~--~~~~~~l~~~~~L~~~~~~~l 190 (196)
T 2yva_A 161 IRIPSHRS------A--RIQEMHMLTVNCLCDLIDNTL 190 (196)
T ss_dssp EECSCSCH------H--HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCh------h--HHHHHHHHHHHHHHHHHHHHh
Confidence 99987643 1 114499999999999998764
No 9
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=99.92 E-value=5.1e-24 Score=178.89 Aligned_cols=162 Identities=18% Similarity=0.242 Sum_probs=138.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCChhHHHHHH----HHHHcCCCeEEEEeccchHHHHHHHHHHH------HhcCCeeee
Q 019775 16 SENTLLDLFKSQQDHLNYFFQHLSLPHTLTFT----QTLLKCRGTIFFTGVGKSGFVANKISQTL------ISLGIKSGF 85 (336)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~----~~i~~a~~~I~i~G~G~s~~~a~~~~~~l------~~~g~~~~~ 85 (336)
..++++++++.+.++++++.+.++ +.+++++ +.|.++ ++||++|.|.|+.+|.+++++| .+.|+++..
T Consensus 5 ~~~~~~~~~~~~~~~l~~t~~~l~-~~i~~~~~~i~~~i~~a-~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~ 82 (199)
T 1x92_A 5 MQHRIRQLFQASIETKQQALEVLP-PYIEQASLVMVNALLNE-GKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVA 82 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHTT-CCEEEECSTHHHHHHHHHHHHHHTCSSSCCCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHCC-CEEEEEcCchhHHHHHHHHHHHhcCcccCCCCCceEe
Confidence 357788999999999999999998 5787877 778889 6999999999999999999999 778999998
Q ss_pred cCCc-----------cccccc----cCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccc---cC
Q 019775 86 LNPL-----------DALHGD----IGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAV---CD 147 (336)
Q Consensus 86 ~~~~-----------~~~~~~----~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~---ad 147 (336)
+++. ...... ...++++|++|+||+||++++++++++.||++|+++|+||++.++|++++ ||
T Consensus 83 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad 162 (199)
T 1x92_A 83 LTTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPED 162 (199)
T ss_dssp TTCCHHHHHHHHHHTCGGGTTHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTC
T ss_pred cCCChhHHHHhhcCccHHHHHHHHHHhCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCC
Confidence 8632 111111 13578999999999999999999999999999999999999999999999 99
Q ss_pred EEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhc
Q 019775 148 MNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGAR 187 (336)
Q Consensus 148 ~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~ 187 (336)
++|.+++..+ ..+ ..++++++|+|+..+..+.
T Consensus 163 ~~l~~~~~~~------~~~--~~~~l~i~~~L~~~~~~~~ 194 (199)
T 1x92_A 163 VEIRVPSKIT------ARI--QEVHLLAIHCLCDLIDRQL 194 (199)
T ss_dssp EEEECSCSCH------HHH--HHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCch------HHH--HHHHHHHHHHHHHHHHHHh
Confidence 9999998654 112 7899999999999988764
No 10
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=99.89 E-value=6.8e-23 Score=171.85 Aligned_cols=164 Identities=19% Similarity=0.256 Sum_probs=138.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHh-cCChhHHHHHHHHH----HcCCCeEEEEeccchHHHHHHHHHHH------HhcCCe
Q 019775 14 KVSENTLLDLFKSQQDHLNYFFQ-HLSLPHTLTFTQTL----LKCRGTIFFTGVGKSGFVANKISQTL------ISLGIK 82 (336)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~~~i----~~a~~~I~i~G~G~s~~~a~~~~~~l------~~~g~~ 82 (336)
++..++++++++.+.+.++++.+ .++.+.++++++.+ .++ ++||++|.|.|+.+|.+++..| .+.|++
T Consensus 4 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~i~~~i~~~-~~I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~ 82 (198)
T 2xbl_A 4 NRELTYITNSIAEAQRVMAAMLADERLLATVRKVADACIASIAQG-GKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLP 82 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTT-CCEEEECSTHHHHHHHHHHHHHHSCSSSCCCCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHcC-CEEEEEeCcHhhHHHHHHHHHHHhhhccCCCCCc
Confidence 44467899999999999999998 88888999999887 477 6999999999999999998654 456888
Q ss_pred eeecC-Ccccc--------------ccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccC
Q 019775 83 SGFLN-PLDAL--------------HGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCD 147 (336)
Q Consensus 83 ~~~~~-~~~~~--------------~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad 147 (336)
+..++ +.... ......++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||
T Consensus 83 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad 162 (198)
T 2xbl_A 83 AVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCD 162 (198)
T ss_dssp EEETTCCHHHHHHHHHHHCGGGTTHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCS
T ss_pred eEEecCChHHHHHhhccCCHHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCC
Confidence 88885 33210 1112347899999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhh
Q 019775 148 MNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGA 186 (336)
Q Consensus 148 ~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~ 186 (336)
++|.++.+.+ . .+..++++++|+|+..+.++
T Consensus 163 ~~l~~~~~~~------~--~~~~~~l~i~~~L~~~~~~~ 193 (198)
T 2xbl_A 163 LLLEVPSADT------P--KIQEGHLVLGHIVCGLVEHS 193 (198)
T ss_dssp EEEECSCSSH------H--HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcH------H--HHHHHHHHHHHHHHHHHHHH
Confidence 9999988755 1 25789999999999988765
No 11
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=99.89 E-value=2.3e-22 Score=168.62 Aligned_cols=163 Identities=18% Similarity=0.283 Sum_probs=136.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcC---CCeEEEEeccchHHHHHHHHHHHH------hcCCeeeec
Q 019775 16 SENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKC---RGTIFFTGVGKSGFVANKISQTLI------SLGIKSGFL 86 (336)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a---~~~I~i~G~G~s~~~a~~~~~~l~------~~g~~~~~~ 86 (336)
..+.++++++...+.++++.+.+++ .++++++.|.++ ++|||++|.|.|..+|.+++++|. +.|++++.+
T Consensus 6 ~~~~~~~~~~~~~~~l~~t~~~l~~-~i~~a~~~i~~al~~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~ 84 (201)
T 3trj_A 6 SLDKINSYFESSIQAKIETANALPP-AIAQAAKAMVSCLENGGKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIAL 84 (201)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHTTCCEEEEESTHHHHHHHHHHHHHHC-------CCCEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEc
Confidence 4678899999999999999999995 999999997543 259999999999999999999998 689999988
Q ss_pred C-Ccccc-------------ccc-cCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCcccccc---CE
Q 019775 87 N-PLDAL-------------HGD-IGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVC---DM 148 (336)
Q Consensus 87 ~-~~~~~-------------~~~-~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~a---d~ 148 (336)
+ +...+ ... ...++++|++|+||+||++++++++++.||++|+++|+||++.++|++++| |+
T Consensus 85 ~~d~~~~~a~~~d~~~~~~~~~~l~~~~~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~ 164 (201)
T 3trj_A 85 TGDVATITAVGNHYGFSQIFAKQVAALGNEDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDI 164 (201)
T ss_dssp TSCHHHHHHHHHHTCGGGTTHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCE
T ss_pred cCChHHHHHhccCCCHHHHHHHHHHhhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCE
Confidence 6 32110 000 123789999999999999999999999999999999999999999999999 99
Q ss_pred EEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhc
Q 019775 149 NVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGAR 187 (336)
Q Consensus 149 ~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~ 187 (336)
+|.+|.... -....++++++|+|+..+.+..
T Consensus 165 ~l~~~~~~~--------~~~~~~~l~i~~~l~~~v~~~l 195 (201)
T 3trj_A 165 ELRVPSDNI--------ANIQENHFLIVHCLCDIIDQKL 195 (201)
T ss_dssp EEEESCCCH--------HHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEEeCCCCc--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 999988644 1236788999999998887653
No 12
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.88 E-value=1.9e-22 Score=161.22 Aligned_cols=148 Identities=32% Similarity=0.603 Sum_probs=116.8
Q ss_pred HHhhcCCChHHHhhcCCCCchhhhhhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHH
Q 019775 183 MMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGD 262 (336)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~d 262 (336)
+++.++..++++.+.|+.+.+++.+.++|+++|.+...++++++++++.++++.|.+++++.+||+|++|+++|+||.+|
T Consensus 2 ~~~~~~f~~~~~~~~~~~~~l~~~l~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~d 81 (149)
T 3k2v_A 2 NAEARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGD 81 (149)
T ss_dssp ------------------CHHHHHTTSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHH
T ss_pred cccccCCCHHHhhhcCCCchhchhcccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHH
Confidence 56778888999999999999999999999999998222669999999999999999999999999998899999999999
Q ss_pred HHHHHHhcCCchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 263 LRRTLKASGEGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 263 l~~~~~~~~~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|...+.. +......++.++|.+++.++.+++++.++++.|.++ +...+||+|+ ++++|+||+.||+++
T Consensus 82 l~~~~~~-~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~-~~~~Giit~~dil~a 149 (149)
T 3k2v_A 82 LRRVFDT-GVDMRDASIADVMTRGGIRIRPGTLAVDALNLMQSR--HITCVLVADG-DHLLGVVHMHDLLRA 149 (149)
T ss_dssp HHHHHCS-SSCCTTCBHHHHSEESCCEECTTCBHHHHHHHHHHH--TCSEEEEEET-TEEEEEEEHHHHTCC
T ss_pred HHHHHhc-CCCcccCcHHHHcCCCCeEECCCCCHHHHHHHHHHc--CCCEEEEecC-CEEEEEEEHHHhhcC
Confidence 9987764 222236789999999999999999999999999999 8999999998 499999999999874
No 13
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=99.88 E-value=6.5e-22 Score=164.47 Aligned_cols=159 Identities=18% Similarity=0.207 Sum_probs=131.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHH----HcCCCeEEEEeccchHHHHHHHHHHH------HhcCCeeee
Q 019775 16 SENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTL----LKCRGTIFFTGVGKSGFVANKISQTL------ISLGIKSGF 85 (336)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i----~~a~~~I~i~G~G~s~~~a~~~~~~l------~~~g~~~~~ 85 (336)
..++++++++.+.+.++++.+.+ +.++++++.+ .++ ++||++|.|+|+.+|.+++..| .+.|+++..
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~l--~~i~~~~~~i~~~l~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~g~~~~~ 79 (188)
T 1tk9_A 3 LINLVEKEWQEHQKIVQASEILK--GQIAKVGELLCECLKKG-GKILICGNGGSAADAQHFAAELSGRYKKERKALAGIA 79 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGH--HHHHHHHHHHHHHHHTT-CCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCC-CEEEEEeCcHhHHHHHHHHHHHhhhhccCCCCCceEe
Confidence 46788899999999999999888 8899998854 458 6999999999999999999754 567898888
Q ss_pred cC-Ccccc--------------ccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEE
Q 019775 86 LN-PLDAL--------------HGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNV 150 (336)
Q Consensus 86 ~~-~~~~~--------------~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i 150 (336)
++ +.... ......++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||++|
T Consensus 80 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l 159 (188)
T 1tk9_A 80 LTTDTSALSAIGNDYGFEFVFSRQVEALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNL 159 (188)
T ss_dssp SSCCHHHHHHHHHHTCGGGHHHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEE
T ss_pred ccCCchhHhhhhcCCCHHHHHHHHHHHhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEE
Confidence 85 34211 1122347899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHh
Q 019775 151 HLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMG 185 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~ 185 (336)
.++.+.. . ......++++++|...+.+
T Consensus 160 ~~~~~~~------~--~~~~~~~~~~~~l~~~v~~ 186 (188)
T 1tk9_A 160 VVPSDDT------A--RIQEMHILIIHTLCQIIDE 186 (188)
T ss_dssp EESCSCH------H--HHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCH------H--HHHHHHHHHHHHHHHHHHh
Confidence 9988654 1 1345677888888776654
No 14
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=99.88 E-value=4.2e-22 Score=172.38 Aligned_cols=176 Identities=13% Similarity=0.164 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHc----CCCeEEEEeccchHHHHHHHHHHHHhcCC-eeeecCC-----
Q 019775 19 TLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLK----CRGTIFFTGVGKSGFVANKISQTLISLGI-KSGFLNP----- 88 (336)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~----a~~~I~i~G~G~s~~~a~~~~~~l~~~g~-~~~~~~~----- 88 (336)
+++++++...+.++.+.+ .+.+.+++++++|.+ + ++||++|+|.|+.+|.+++++|..+|. ++...++
T Consensus 5 ~~~~~~~~~~~~l~~~~~-~~~~~i~~a~~~l~~~i~~~-~~I~i~G~G~S~~~A~~~~~~l~~l~~~~~~~~~~~~l~~ 82 (243)
T 3cvj_A 5 SFTDYCKFFNRILSEVQE-TQEQAIIKGAHLVSEAVMNG-GRFYVFGSGHSHMIAEEIYNRAGGLALVTAILPPELMLHE 82 (243)
T ss_dssp CHHHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHTT-CCEEEEESGGGHHHHHHTSSSTTCBTTEEECCCGGGSSSS
T ss_pred HHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHCC-CEEEEEcCcHHHHHHHHHHHHhccccccCcccchhhhccC
Confidence 356677777777777776 678899999887754 6 699999999999999999999988875 4322211
Q ss_pred -------------ccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCC-----------cccc
Q 019775 89 -------------LDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGN-----------ALAA 144 (336)
Q Consensus 89 -------------~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s-----------~l~~ 144 (336)
...+......++++|++|+||+||++++++++++.||++|++||+||++..| |+++
T Consensus 83 ~~~~~~~~e~~~g~~~~~~~~~~~~~~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~ 162 (243)
T 3cvj_A 83 RPNKSTYLERIEGLSKSYLKLHQVTNKDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYE 162 (243)
T ss_dssp STTHHHHHTTCTTHHHHHHHHTTCCTTCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGG
T ss_pred CchhhhhhhhcccHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHH
Confidence 0111112345889999999999999999999999999999999999999777 9999
Q ss_pred ccCEEEEcCCCcccC-------CCCCCChhHHHHHHHHHHHHHHHHHhh---cCCChHHHhhc
Q 019775 145 VCDMNVHLPVERELC-------PFDLAPVTSTAIQMVFGDTVAIAMMGA---RNLTRDEYAAN 197 (336)
Q Consensus 145 ~ad~~i~~~~~~~~~-------~~~~~~~~s~~~~~~l~d~l~~~~~~~---~~~~~~~~~~~ 197 (336)
+||++|.+++..... +....+++ .+++++++|+|+..+... ++.++..|...
T Consensus 163 ~aD~~l~~~~~~~e~~~~~~~~~~~~~~~s-~~~~~~il~~L~~~~~~~~~~~~~~~~~~~~~ 224 (243)
T 3cvj_A 163 YADVVLDNGAPVGDAGFQIANSEIYSGATS-DSIGCFLAQALIVETLHLLVQQGFEPPVFKSS 224 (243)
T ss_dssp GCSEEEECCCCTTSCCEECSSSSCEECCCH-HHHHHHHHHHHHHHHHHHHHHTTCCCCBCCCT
T ss_pred hCCEEEECCCCcccceeeccCccccCCcHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCeeecC
Confidence 999999998764211 11224444 589999999999887765 34444445433
No 15
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=99.87 E-value=2.5e-21 Score=176.54 Aligned_cols=169 Identities=16% Similarity=0.083 Sum_probs=139.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCChhHHHHHHH-HHHcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCcccc
Q 019775 15 VSENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQ-TLLKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDAL 92 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~ 92 (336)
-.+++..+.+.++.+.++++++....+.++.+.. .+.++ ++|+++|+|+|+.+|..+.+.|.+ .|+++....+++..
T Consensus 11 ~~~~~~~kEI~eqP~~l~~~l~~~~~~~~~~~~~~~~~~a-~~I~i~G~GtS~~aa~~~~~~~~~~~g~~~~~~~~se~~ 89 (366)
T 3knz_A 11 HHENLYFQGMNETPLRLLEMLTQTREDLWRAAQALTERGV-TRIILTGSGTSYHGALTARTFMQRWCALPVDVCWPFMLD 89 (366)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHHHTSCEEEECGGGCC
T ss_pred cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCC-CEEEEEEechHHHHHHHHHHHHHHHHCCCeEEEcchHHH
Confidence 4567888899999999999998844456666653 35677 699999999999999999999998 49999888776553
Q ss_pred ccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHH
Q 019775 93 HGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQ 172 (336)
Q Consensus 93 ~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~ 172 (336)
.. ...++++|++|+||+||+|++++++++.||++|+++|+||++.+||+++.||++|.++.+.+ .....+.|.+++
T Consensus 90 ~~-~~~~~~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~~~~g~E---~~~a~tks~tsq 165 (366)
T 3knz_A 90 DE-TLARSGKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILTVPCGEE---TAGAKTKGYHCT 165 (366)
T ss_dssp HH-HHHHSCSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECCCCCCC---------CTHHHHH
T ss_pred hh-ccCCCCCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEecCCCcc---ccccccHHHHHH
Confidence 32 23458999999999999999999999999999999999999999999999999999988766 335778899999
Q ss_pred HHHHHHHHHHHHhhcC
Q 019775 173 MVFGDTVAIAMMGARN 188 (336)
Q Consensus 173 ~~l~d~l~~~~~~~~~ 188 (336)
+.++++|+..+...++
T Consensus 166 l~~l~lLa~~l~~~~g 181 (366)
T 3knz_A 166 VLNLMLLALAVAGQQQ 181 (366)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998765
No 16
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=99.87 E-value=1.9e-21 Score=164.76 Aligned_cols=161 Identities=16% Similarity=0.217 Sum_probs=128.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhc-CChhHHHHHHHH----HHcCCCeEEEEeccchHHHHHHHH------HHHHhcCCeee
Q 019775 16 SENTLLDLFKSQQDHLNYFFQH-LSLPHTLTFTQT----LLKCRGTIFFTGVGKSGFVANKIS------QTLISLGIKSG 84 (336)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~i~~~~~~----i~~a~~~I~i~G~G~s~~~a~~~~------~~l~~~g~~~~ 84 (336)
..+.+.+++....+.++++.+. .+.+.++++++. +.++ ++||++|+|.|+.+|.+++ +++.+.|+++.
T Consensus 22 ~~~~~~~~i~~~~~~l~~~~~~~~~~~~i~~~~~~i~~~l~~~-~~I~i~G~G~S~~~A~~~a~~l~~~~~~~~~g~~~~ 100 (212)
T 2i2w_A 22 YQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG-GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI 100 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-CCEEEEESTHHHHHHHHHHHHHHHHHCTTSSSCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHHhhhcccCCCCeEE
Confidence 4578899999999999999974 566788888877 6788 6999999999999999998 55666799888
Q ss_pred ecCCcccc--------------ccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEE
Q 019775 85 FLNPLDAL--------------HGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNV 150 (336)
Q Consensus 85 ~~~~~~~~--------------~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i 150 (336)
.+.+...+ ......++++|++|+||+||++++++++++.||++|+++|+||++.++|++++||++|
T Consensus 101 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l 180 (212)
T 2i2w_A 101 AISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI 180 (212)
T ss_dssp ECCCTTCGGGGSCCCSCSSHHHHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEE
T ss_pred ecCChHHhhHhhccCCHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEE
Confidence 87643221 0112347899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 019775 151 HLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMM 184 (336)
Q Consensus 151 ~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~ 184 (336)
.++.+.+ .. .+....+.++++|...+.
T Consensus 181 ~~~~g~e------~~-~~~~~~~~~~~~L~~~v~ 207 (212)
T 2i2w_A 181 RVPHFGY------AD-RIQEIHIKVIHILIQLIE 207 (212)
T ss_dssp EECCCSC------HH-HHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCc------hh-HHHHHHHHHHHHHHHHHH
Confidence 9988533 11 344455666666655544
No 17
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=99.87 E-value=2e-21 Score=176.19 Aligned_cols=164 Identities=21% Similarity=0.204 Sum_probs=133.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHhc---CChhHHHHHHH--HHHcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCC
Q 019775 15 VSENTLLDLFKSQQDHLNYFFQH---LSLPHTLTFTQ--TLLKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNP 88 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~---~~~~~i~~~~~--~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~ 88 (336)
-.++.+.+.+.++.+.++++.+. .. .. +++++ .+.++ ++|+++|+|+|+.+|.++++.|.+ .|+++....+
T Consensus 11 ~~~~~m~keI~eqP~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~ 87 (342)
T 1j5x_A 11 HHMSKTLKEITDQKNELKKFFENFVLNL-EK-TEIFSEIQKNLT-DEVLFVGCGSSYNLALTISYYFERVLKIRTKAIPA 87 (342)
T ss_dssp ---CHHHHHHHHHHHTHHHHHHHTGGGT-TC-------C----C-CEEEEEESTHHHHHHHHHHHHHHHHHCCEEEEEEH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhccc-ch-HHHHHHHHhCCC-CEEEEEEchHHHHHHHHHHHHHHHhhCCeEEEECc
Confidence 45677888888999999999987 33 23 66666 56788 699999999999999999999999 8999998876
Q ss_pred ccccccccCCCCCC-cEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChh
Q 019775 89 LDALHGDIGILSSD-DILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVT 167 (336)
Q Consensus 89 ~~~~~~~~~~~~~~-dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~ 167 (336)
.+. ......+.++ |++|+||+||+|++++++++.||++|+++|+||++.+||++++||++|.++. .+ .....+.
T Consensus 88 ~~~-~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~~~~-~e---~~~a~t~ 162 (342)
T 1j5x_A 88 GEV-AFQKIPDLEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPV-RE---EAIVMTK 162 (342)
T ss_dssp HHH-HTTCSCCCCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEECCC-CC---CSSSCCH
T ss_pred hHH-HhcCcccCCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEEcCC-Cc---ceecchH
Confidence 655 3334457788 9999999999999999999999999999999999999999999999999988 34 2446789
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 019775 168 STAIQMVFGDTVAIAMMGA 186 (336)
Q Consensus 168 s~~~~~~l~d~l~~~~~~~ 186 (336)
|.+++++++++|+..+...
T Consensus 163 s~~~~l~~l~~L~~~l~~~ 181 (342)
T 1j5x_A 163 SFSMILLSLMFLADKIAGN 181 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999998764
No 18
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=99.86 E-value=1.2e-20 Score=170.10 Aligned_cols=162 Identities=16% Similarity=0.127 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHH--HcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCcccccc
Q 019775 18 NTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTL--LKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDALHG 94 (336)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i--~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~ 94 (336)
..+.+.+.++.+.++++.+... +.++++++.+ .++ ++|+++|+|+|+.+|.++++.|.+ .|+++..+.+......
T Consensus 6 ~~M~kEI~eqP~~~~~~l~~~~-~~~~~~~~~i~~~~~-~~I~i~G~G~S~~aa~~~~~~l~~~~g~~v~~~~~~~~~~~ 83 (334)
T 3hba_A 6 TIMEQEARTAPQKIAEQLLAND-AITESLGSVLREFKP-KFVMIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVY 83 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCC-SCEEEESSGGGCHHHHHHHHHHHHHHCCCEEECCHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHhCCC-CEEEEEEechHHHHHHHHHHHHHHHhCCcEEEEcchHHHHh
Confidence 3466667778888888877643 5688888877 678 699999999999999999999997 7999998865544434
Q ss_pred ccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHH
Q 019775 95 DIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMV 174 (336)
Q Consensus 95 ~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~ 174 (336)
.....+++|++|++|+||+|++++++++.||++|+++|+||++.+||+++.||+++.++.+.+ .....+.+.+++++
T Consensus 84 ~~~~~~~~dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~~~g~E---~~va~Tksft~~l~ 160 (334)
T 3hba_A 84 GKTLKLAGGLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIPLRAGEE---KAVAATKSYLATLS 160 (334)
T ss_dssp CCCCCCTTCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEECCCCCC---CSSSCSHHHHHHHH
T ss_pred cccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeeeecCCCc---ccccchHHHHHHHH
Confidence 445678999999999999999999999999999999999999999999999999999998766 34467788888888
Q ss_pred HHHHHHHHHH
Q 019775 175 FGDTVAIAMM 184 (336)
Q Consensus 175 l~d~l~~~~~ 184 (336)
.+.+|...+.
T Consensus 161 ~l~~l~~~~~ 170 (334)
T 3hba_A 161 ALLQVAAKWT 170 (334)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 7777766554
No 19
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=99.86 E-value=6.3e-21 Score=170.02 Aligned_cols=177 Identities=16% Similarity=0.173 Sum_probs=139.1
Q ss_pred CcchHHHHHHHHH---HHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHH-HHHHhcCCeeee----
Q 019775 14 KVSENTLLDLFKS---QQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKIS-QTLISLGIKSGF---- 85 (336)
Q Consensus 14 ~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~-~~l~~~g~~~~~---- 85 (336)
.+..++++.+.+. ..++++++...++ +.++++++.|.++ +|||++|.|+|+.+|.+++ ..+..+|.+...
T Consensus 30 ~~~~~i~~~i~~e~~~~~~ai~~t~~~i~-~~i~~i~~~l~~a-~rI~~~G~G~S~~lA~~~a~~~~~~~g~~~~~~~~l 107 (306)
T 1nri_A 30 QSTLEIVRLMNEEDKLVPLAIESCLPQIS-LAVEQIVQAFQQG-GRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGI 107 (306)
T ss_dssp SCHHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHHHHHHHHHTT-CCEEEEESHHHHHHHHHHHHHHHHHHCCCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-CEEEEEeccHhHHHHHHHHHhcccccCCCHHHHHHH
Confidence 4556677777655 6668888888887 8999999999999 6999999999999996544 455555543211
Q ss_pred cC-C----------ccccc------cccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCE
Q 019775 86 LN-P----------LDALH------GDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDM 148 (336)
Q Consensus 86 ~~-~----------~~~~~------~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~ 148 (336)
.. + ..... .....++++|++|+||+||++++++++++.||++|+++|+||++++||++++||+
T Consensus 108 ~~~g~~a~~~a~e~~ed~~~~~~~~l~~~~l~~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~ 187 (306)
T 1nri_A 108 IAGGECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADI 187 (306)
T ss_dssp ETTCTHHHHSCCTTGGGCTTHHHHHHHHTTCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSE
T ss_pred HhcchHHHhhhhhcccCcHHHHHHHHHhcCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCE
Confidence 10 0 01111 1123688999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 149 NVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 149 ~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
+|.++++.+ .......+.+.+++++++|+|+..++.+.+.....
T Consensus 188 ~I~~~~g~E-~~~~st~~~s~ta~~~vl~~L~~~~~~~~g~~~~~ 231 (306)
T 1nri_A 188 AIETIVGPE-ILTGSSRLKSGTAQKMVLNMLTTASMILLGKCYEN 231 (306)
T ss_dssp EEECCCCSC-SSTTCTTTHHHHHHHHHHHHHHHHHHHHTTSCBTT
T ss_pred EEEcCCCCc-cccCcccchhHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 999987655 23344678999999999999999999988744444
No 20
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=99.86 E-value=2e-20 Score=169.44 Aligned_cols=162 Identities=17% Similarity=0.177 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHH--HcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCcccccc
Q 019775 18 NTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTL--LKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDALHG 94 (336)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i--~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~ 94 (336)
..+.+.+.++.+.++++++... +.++++++.+ .++ ++|+++|+|+|+.+|.++.+.|.+ .|+++..+.+......
T Consensus 7 ~~m~kEI~eqP~~~~~~l~~~~-~~~~~~~~~~~~~~~-~~I~i~G~G~S~~aa~~~~~~l~~~~g~~~~~~~~~~~~~~ 84 (344)
T 3fj1_A 7 TRMRREIDEIPEAVQRLLDHGA-QDVARVAAVLRLRDP-SFVATVARGSSDHVCTYLSYAAELLLGLPVASLGPSVASVY 84 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCC-SEEEEECCTHHHHHHHHHHHHHHHHHCCCEEECCTHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhhCCC-CEEEEEEechHHHHHHHHHHHHHHHhCCcEEEecchHHhhh
Confidence 4566777788888888877643 4677787777 677 699999999999999999999998 6999998765444333
Q ss_pred ccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHH
Q 019775 95 DIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMV 174 (336)
Q Consensus 95 ~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~ 174 (336)
.....+++|++|++|+||+|++++++++.||++|+++|+||++.+||+++.||++|.++.+.+ .....+.+.++++.
T Consensus 85 ~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E---~~va~Tksft~ql~ 161 (344)
T 3fj1_A 85 DARLRLDRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTIDIHAGPE---LSVAATKTFVTSAV 161 (344)
T ss_dssp CCCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEECCCCCC---CSTTCHHHHHHHHH
T ss_pred cccCCCCCcEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeeecCCCCc---ccccchHHHHHHHH
Confidence 445678999999999999999999999999999999999999999999999999999998766 34467788888887
Q ss_pred HHHHHHHHHH
Q 019775 175 FGDTVAIAMM 184 (336)
Q Consensus 175 l~d~l~~~~~ 184 (336)
.+-+|...+.
T Consensus 162 ~l~~l~~~~~ 171 (344)
T 3fj1_A 162 AGLMLLADWA 171 (344)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7666665554
No 21
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=99.85 E-value=8.6e-21 Score=173.83 Aligned_cols=235 Identities=13% Similarity=0.094 Sum_probs=169.3
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcCCh------hHH-HHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCee
Q 019775 12 PHKVSENTLLDLFKSQQDHLNYFFQHLSL------PHT-LTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKS 83 (336)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~i-~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~ 83 (336)
+.....+.+.+.+.++.+.++++.+.... +.+ +++++.+.++ ++|+++|+|+|+.+|.++++.|.++ |.++
T Consensus 4 ~k~~~~~~m~keI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~ 82 (368)
T 1moq_A 4 DKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKV-EHIQILACGTSYNSGMVSRYWFESLAGIPC 82 (368)
T ss_dssp CCTTCSSHHHHHHHTHHHHHHHHHTTSEETTEECCGGGCSSHHHHHHHC-CEEEEEECHHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCccHHHHHHHHHHHHHHHHHHhhhccCcccHHHHHHHHHHHHhCC-CEEEEEEchHHHHHHHHHHHHHHHHhCCce
Confidence 34456677788888889999999876431 234 4567888999 6999999999999999999987764 6666
Q ss_pred eecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcC-CeEEEEeCCCCCccccccCEEEEcCCCcccCCCC
Q 019775 84 GFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKG-AYLVSVTSVEGNALAAVCDMNVHLPVERELCPFD 162 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g-~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~ 162 (336)
......+. ......++++|++|+||+||+|++++++++.||++| +++|+||++.+||+++.||++|.++.+.+ ..
T Consensus 83 ~~~~~~e~-~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~~~~~~e---~~ 158 (368)
T 1moq_A 83 DVEIASEF-RYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTE---IG 158 (368)
T ss_dssp EEEEHHHH-HTSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECCCCCC---CS
T ss_pred EEEehhhH-hhhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEEcCCCCe---ec
Confidence 65443332 233556789999999999999999999999999999 99999999999999999999999998755 45
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhcCCChHHHhhcCCCCchhhhhhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCc
Q 019775 163 LAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANHPAGRIGKSLIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGC 242 (336)
Q Consensus 163 ~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~ 242 (336)
...+.|.+++++++++|+..+...++.+.+++.+... .+.. +.-.++++. ..+..+.+..+.+. +.
T Consensus 159 ~a~t~s~~~~l~~l~~L~~~l~~~~~~~~~~~~~~~~--~l~~-l~~~~~~~l---------~~~~~~~~~a~~~~--~~ 224 (368)
T 1moq_A 159 VASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVH--GLQA-LPSRIEQML---------SQDKRIEALAEDFS--DK 224 (368)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH--HHHH-HHHHHHHHT---------TCTTHHHHHHHHHT--TC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHH-HHHHHHHHH---------hhhHHHHHHHHHHh--CC
Confidence 6788999999999999999999887655554432210 0111 111122222 11233555555554 33
Q ss_pred ceEEEEcCCCcEEEEeeHHHHHHH
Q 019775 243 GCLLVIDEEYHLIGTFTDGDLRRT 266 (336)
Q Consensus 243 ~~ipVvd~~~~~~G~it~~dl~~~ 266 (336)
..+.++. .|-..|+..+..|.-.
T Consensus 225 ~~~~~lG-~G~~~~~A~E~aLKl~ 247 (368)
T 1moq_A 225 HHALFLG-RGDQYPIALEGALKLK 247 (368)
T ss_dssp SEEEEEE-CGGGHHHHHHHHHHHH
T ss_pred CcEEEEe-CCCCHHHHHHHHHHHH
Confidence 4566666 3555666666555533
No 22
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=99.85 E-value=1.4e-20 Score=172.10 Aligned_cols=173 Identities=12% Similarity=0.080 Sum_probs=145.5
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcC-Ch-----hHH-HHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCe
Q 019775 11 LPHKVSENTLLDLFKSQQDHLNYFFQHL-SL-----PHT-LTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIK 82 (336)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-----~~i-~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~ 82 (336)
.+....++.+.+-+.++.+.++++++.. +. ..+ ..+.+.+.++ +||+++|+|+|+.+|..+.+.|.++ |++
T Consensus 5 ~~k~~~~h~m~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~a-~~I~i~G~GtS~~aa~~~~~~~~~~~g~~ 83 (372)
T 3tbf_A 5 ASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKT-KHICIVACGTSYNAGMTAKYWIEKYAKVP 83 (372)
T ss_dssp -CCTTCSSHHHHHHHTHHHHHHHHHHTTEETTEECGGGSCSTHHHHHHSC-CEEEEEECHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhHHHHHHHhcC-CEEEEEEechHHHHHHHHHHHHHHHhCCc
Confidence 4456677888888999999999999853 21 223 2345678899 6999999999999999999999985 888
Q ss_pred eeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcC-CeEEEEeCCCCCccccccCEEEEcCCCcccCCC
Q 019775 83 SGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKG-AYLVSVTSVEGNALAAVCDMNVHLPVERELCPF 161 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g-~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~ 161 (336)
+....+.+.. +....++++|++|+||+||+|++++++++.||++| +++|+||++.+||+++.||++|.++.+.+ .
T Consensus 84 ~~~~~~se~~-~~~~~~~~~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~~~~g~E---~ 159 (372)
T 3tbf_A 84 CSVEIASEIR-YRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVE---I 159 (372)
T ss_dssp EEEEEHHHHT-TSCCCCCTTEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEECCCCCC---C
T ss_pred EEEechhHhh-hcccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeeeecCCcc---c
Confidence 8877655443 23446889999999999999999999999999999 99999999999999999999999998765 3
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 162 DLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 162 ~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
....+.|.+++++++++|+..+.+.++
T Consensus 160 ~~a~Tks~t~ql~~l~lL~~~l~~~~g 186 (372)
T 3tbf_A 160 GVASTKAFTTQLVALAIFTLVIAKLKN 186 (372)
T ss_dssp BSSCSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 457789999999999999999998865
No 23
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=99.85 E-value=4e-20 Score=168.49 Aligned_cols=131 Identities=17% Similarity=0.222 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHhcCChhHHHHHHHHHHc--CCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCccccccccCCCC
Q 019775 24 FKSQQDHLNYFFQHLSLPHTLTFTQTLLK--CRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDALHGDIGILS 100 (336)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~i~~~~~~i~~--a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~ 100 (336)
.+.+++.++++.+ +.+.++++++.|.+ + ++|+++|+|+|+.+|.++++.|.+ .|+++....+.+........++
T Consensus 25 ~~~~~~~i~~t~~--~~~~i~~~~~~i~~~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~~e~~~~~~~~l~ 101 (355)
T 2a3n_A 25 QDEYLTSAREIIA--ARQKAEQVADEIYQAGF-SSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQAAELIHKGNKRLN 101 (355)
T ss_dssp HHHHHHHHHHHHT--THHHHHHHHHHHHHHCC-SCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEEHHHHHHHCCTTCC
T ss_pred HHHHHHHHHHHHh--hHHHHHHHHHHHHhCCC-CEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcCcHHHHhhchhcCC
Confidence 4556788888888 78999999999998 8 699999999999999999999998 7999988777665554445678
Q ss_pred CCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 101 SDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 101 ~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
++|++|+||+||+|++++++++.||++|+++|+||++.+||+++.||++|.++.+.+
T Consensus 102 ~~dlvI~iS~SG~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~~~~~~~ 158 (355)
T 2a3n_A 102 KDSVVITLSKSGDTKESVAIAEWCKAQGIRVVAITKNADSPLAQAATWHIPMRHKNG 158 (355)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEECCCSSC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEEeCCCcc
Confidence 999999999999999999999999999999999999999999999999999987654
No 24
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=99.85 E-value=2.1e-20 Score=171.08 Aligned_cols=168 Identities=16% Similarity=0.203 Sum_probs=137.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcC--------ChhHHHHHHHHHHcCCCeEEEEeccch---HHHHHHHHHHHHhcCCee
Q 019775 15 VSENTLLDLFKSQQDHLNYFFQHL--------SLPHTLTFTQTLLKCRGTIFFTGVGKS---GFVANKISQTLISLGIKS 83 (336)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~i~~~~~~i~~a~~~I~i~G~G~s---~~~a~~~~~~l~~~g~~~ 83 (336)
...+.+.+-+.++.+.++++.+.. +.+.++++++.|.++ +||+++|+|+| ..+|.++..++..++..+
T Consensus 4 ~~~~~m~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~l~~~~~~l~~~-~~I~i~G~G~S~~~~~~a~~~~~~l~~~~~~~ 82 (367)
T 2poc_A 4 PYKHFMQKEIFEQPDSAFNTMRGRIDFENCVVTLGGLKSWLSTIRRC-RRIIMIACGTSYHSCLATRSIFEELTEIPVSV 82 (367)
T ss_dssp CCSSHHHHHHHTHHHHHHHHHTTTEETTTTEECCTTTGGGHHHHHTS-SEEEEEECHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcccccccCHHHHHHHHHHHhCC-CEEEEEEecHHHHHHHHHHHHHHHHhCCCeEE
Confidence 345567777888899999988753 346788999999999 69999999999 566777777776665555
Q ss_pred eecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCC
Q 019775 84 GFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDL 163 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~ 163 (336)
....+. ......++++|++|+||+||+|++++++++.||++|+++|+||++.+||++++||++|.++.+.+ ...
T Consensus 83 ~~~~e~---~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E---~~~ 156 (367)
T 2poc_A 83 ELASDF---LDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHINAGPE---IGV 156 (367)
T ss_dssp EEHHHH---HHTTCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEECCCCCC---CSS
T ss_pred Eehhhh---HhhccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEcCCCCc---ccc
Confidence 433222 22345678999999999999999999999999999999999999999999999999999998655 344
Q ss_pred CChhHHHHHHHHHHHHHHHHHhhcCC
Q 019775 164 APVTSTAIQMVFGDTVAIAMMGARNL 189 (336)
Q Consensus 164 ~~~~s~~~~~~l~d~l~~~~~~~~~~ 189 (336)
..+.|.++++.++++|+..++..++.
T Consensus 157 a~t~s~t~~l~~l~~L~~~l~~~~~~ 182 (367)
T 2poc_A 157 ASTKAYTSQYIALVMFALSLSNDSIS 182 (367)
T ss_dssp SCSHHHHHHHHHHHHHHHHHTTTBST
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCc
Confidence 67899999999999999999887653
No 25
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=99.84 E-value=1.5e-20 Score=172.40 Aligned_cols=168 Identities=18% Similarity=0.228 Sum_probs=139.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhc--------CChhHHHHHHHHHHcCCCeEEEEeccchH---HHHHHHHHHHHhcCCe
Q 019775 14 KVSENTLLDLFKSQQDHLNYFFQH--------LSLPHTLTFTQTLLKCRGTIFFTGVGKSG---FVANKISQTLISLGIK 82 (336)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~i~~~~~~i~~a~~~I~i~G~G~s~---~~a~~~~~~l~~~g~~ 82 (336)
......+.+-+.++.+.++++.+. ++.+.++++++.|.++ ++|+++|+|+|+ .+|.++..++..++..
T Consensus 13 ~~~~~~m~kEI~eqP~~~~~~l~~~~~~~~~~~~~~~l~~~~~~l~~~-~~I~i~G~G~S~~a~~~a~~~~~~l~~~~~~ 91 (375)
T 2zj3_A 13 GNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRC-RRLILIACGTSYHAGVATRQVLEELTELPVM 91 (375)
T ss_dssp TTSSSHHHHHHHTHHHHHHHHHTTTEETTTTEECCGGGTTTHHHHHHC-SEEEEEECHHHHHHHHHHHHHHHHHHCSCEE
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHHHhCC-CEEEEEEecHHHHHHHHHHHHHHHHhCCCeE
Confidence 445667777888889999999865 3457888999999999 699999999995 6677777777666666
Q ss_pred eeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCC
Q 019775 83 SGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFD 162 (336)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~ 162 (336)
+....+. ......++++|++|+||+||+|++++++++.||++|+++|+||++.+||+++.||++|.++.+.+ ..
T Consensus 92 ~~~~~d~---~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~E---~~ 165 (375)
T 2zj3_A 92 VELASDF---LDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPE---IG 165 (375)
T ss_dssp EEEHHHH---HHTTCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEECCCCCC---CC
T ss_pred EEeechH---hhhccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeeeecCCcc---cc
Confidence 6543332 22345678999999999999999999999999999999999999999999999999999998755 34
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 163 LAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 163 ~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
...+.|.++++.++++|+..+...++
T Consensus 166 ~a~t~s~ta~l~~l~~L~~~l~~~~~ 191 (375)
T 2zj3_A 166 VASTKAYTSQFVSLVMFALMMCDDRI 191 (375)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHTTTCG
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHcC
Confidence 56789999999999999988887654
No 26
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.84 E-value=3.2e-20 Score=149.46 Aligned_cols=124 Identities=20% Similarity=0.295 Sum_probs=109.1
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCch---hhhhHhhhc
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGI---FKLTVGEMC 283 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~---~~~~i~~~~ 283 (336)
+..+++++|.|...++++++++|+.+|+.+|.+++++++||+|++|+++|++|.+|++..+....... ...++.++|
T Consensus 13 l~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im 92 (156)
T 3k6e_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT 92 (156)
T ss_dssp HHTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTC
T ss_pred hhccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhh
Confidence 34578999999888899999999999999999999999999998899999999999998876543221 246789999
Q ss_pred CCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 284 NRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 284 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.+++.++.+++++.++++.|.++ + .+||+|++|+++|+||+.||+++
T Consensus 93 ~~~~~~v~~~~~l~~~~~~m~~~--~--~lpVVd~~g~l~GiiT~~Dil~~ 139 (156)
T 3k6e_A 93 KTDVAVVSPDFTITEVLHKLVDE--S--FLPVVDAEGIFQGIITRKSILKA 139 (156)
T ss_dssp BCSCCCBCTTCCHHHHHHHTTTS--S--EEEEECTTSBEEEEEEHHHHHHH
T ss_pred cCCceecccccHHHHHHHHHHHc--C--CeEEEecCCEEEEEEEHHHHHHH
Confidence 99999999999999999999876 5 49999999999999999999874
No 27
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.83 E-value=6.4e-20 Score=168.11 Aligned_cols=169 Identities=11% Similarity=0.096 Sum_probs=136.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHc-CCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccc
Q 019775 14 KVSENTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLK-CRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDA 91 (336)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~-a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~ 91 (336)
.-.++.+.+-+.++.+.++++++.. .+.++++++.|.+ + ++|+++|+|+|+.+|.++++.|.++ |.++....+.+.
T Consensus 11 ~~~~h~m~kEI~eqp~~~~~~~~~~-~~~l~~~~~~i~~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~~~~ 88 (373)
T 2aml_A 11 HHMKPTMMTYINEEEEMCRVILADF-QTNAEKLESLVKNGA-KEWLILATGSSLNAAQSAKYYIENLADVRITIEEPFNH 88 (373)
T ss_dssp GGGCCCHHHHHTTHHHHHHHHHHHH-HHHHHHHHTTCTTCC-CEEEEEECHHHHHHHHHHHHHHHHHSSCEEEEECHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHccC-CEEEEEEecHHHHHHHHHHHHHHHHhCCcEEEECchhH
Confidence 3445666677777788888888754 2578888888765 6 6999999999999999999999985 899888754433
Q ss_pred cccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc-CCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHH
Q 019775 92 LHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK-GAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTA 170 (336)
Q Consensus 92 ~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~-g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~ 170 (336)
......++++|++|+||+||+|++++++++.||++ |+++|+||++.+||+++.||++|.++.+.+ .....+.+.+
T Consensus 89 -~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~~~~~~E---~~~~~t~s~t 164 (373)
T 2aml_A 89 -LYYEKLSSHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKE---RVGYVTKGFT 164 (373)
T ss_dssp -HHHCCCCTTCCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEECSCCCC---CSSSCSHHHH
T ss_pred -HHhccCCCCCCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCcceecCCCcc---ccccccccHH
Confidence 23335588999999999999999999999999999 999999999999999999999999998765 2234566677
Q ss_pred HHHHHHHHHHHHHHhhcC
Q 019775 171 IQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 171 ~~~~l~d~l~~~~~~~~~ 188 (336)
+++..+-++...+...++
T Consensus 165 s~~~~l~ll~~~l~~~~g 182 (373)
T 2aml_A 165 ATVLTLMLTGLHFAYKTV 182 (373)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 777666667777766654
No 28
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=99.83 E-value=8.9e-20 Score=165.71 Aligned_cols=160 Identities=13% Similarity=0.120 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCccccccccCCC
Q 019775 21 LDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDALHGDIGIL 99 (336)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~ 99 (336)
.+.+.++.+.++++.+... +.++.+ ...++ +||+++|+|+|+.+|.++++.|.+ .|+++....+++... ....+
T Consensus 5 ~keI~eqP~~~~~~l~~~~-~~~~~~--~~~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~~se~~~-~~~~~ 79 (352)
T 3g68_A 5 QDYMLETPVRMREIISNAD-SLFNEV--KRTNL-KKIIITGSGTSYHSGVQVQPYLQNLLDIDVVKMYPFMITE-DTFKF 79 (352)
T ss_dssp HHHHHTHHHHHHHHHHHHH-HHTTTG--GGSCC-SEEEEECSHHHHHHHHHHHHHHHHHCSSEEEEECGGGCCG-GGGSS
T ss_pred HHHHHHHHHHHHHHHHhhH-HhhhHh--hhcCC-CEEEEEEeehHHHHHHHHHHHHHHHhCCcEEEEcchhhhh-cccCC
Confidence 3445556666666665421 111111 12566 699999999999999999999998 599999888766643 33455
Q ss_pred C-CCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHH
Q 019775 100 S-SDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDT 178 (336)
Q Consensus 100 ~-~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~ 178 (336)
. ++|++|+||+||+|++++++++.||++|+++|+||++.+||++++||++|.++.+.+ .....+.+.+++++++++
T Consensus 80 ~~~~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~~~~g~E---~~va~tksf~~ql~~l~~ 156 (352)
T 3g68_A 80 DNENTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILTVNCGEE---KSGAKTKGYYCTKLNLML 156 (352)
T ss_dssp CCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECCCCCCCC---CCSSCSHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEEeCCCCC---ccccccHHHHHHHHHHHH
Confidence 5 999999999999999999999999999999999999999999999999999988766 335678899999999999
Q ss_pred HHHHHHhhcC
Q 019775 179 VAIAMMGARN 188 (336)
Q Consensus 179 l~~~~~~~~~ 188 (336)
|...+...++
T Consensus 157 La~~l~~~~g 166 (352)
T 3g68_A 157 LGLQIAREKG 166 (352)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998765
No 29
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=99.82 E-value=9.2e-20 Score=167.80 Aligned_cols=164 Identities=21% Similarity=0.217 Sum_probs=133.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCh--hHHHHHHH-HHHcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCcccc
Q 019775 17 ENTLLDLFKSQQDHLNYFFQHLSL--PHTLTFTQ-TLLKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDAL 92 (336)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~--~~i~~~~~-~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~ 92 (336)
...+.+-+.++.+.++++.+..+. ..+.++++ .+.++.++|+++|+|+|+.+|.++++.|.+ .|+++..+++.+..
T Consensus 13 ~~~m~kEI~eqP~~~~~~l~~~~~~~~~l~~~~~~~l~~~~~~I~i~G~GtS~~~a~~~~~~l~~~~g~~v~~~~~~~~~ 92 (384)
T 3c3j_A 13 GTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLV 92 (384)
T ss_dssp CCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCEEEEECSTHHHHHHHHHHHHHHHHHCSEEEECCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHhcCCCEEEEEEehHHHHHHHHHHHHHHHHhCCcEEEeccHHHH
Confidence 666777788889999988876632 34566664 355651499999999999999999999987 69999998765444
Q ss_pred ccccCCC--CCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEEEEeCCCCCccccccC-----EEEEcCCCcccCCCCC
Q 019775 93 HGDIGIL--SSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLVSVTSVEGNALAAVCD-----MNVHLPVERELCPFDL 163 (336)
Q Consensus 93 ~~~~~~~--~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi~IT~~~~s~l~~~ad-----~~i~~~~~~~~~~~~~ 163 (336)
....... +++|++|+||+||+|++++++++.||++ |+++|+||++.+|+|+++|| ++|.++...+ ....
T Consensus 93 ~~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La~~ad~~~~~~~l~~~~~~~--e~~~ 170 (384)
T 3c3j_A 93 TNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETH--DRGF 170 (384)
T ss_dssp HCHHHHCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHHHHTCTTBCCEECCGGGS--CCSS
T ss_pred hChhhhhCCCCCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHhhhccCCcEEEEEecCCCc--ceee
Confidence 3333333 6899999999999999999999999999 99999999999999999999 9999987333 2455
Q ss_pred CChhHHHHHHHHHHHHHHH
Q 019775 164 APVTSTAIQMVFGDTVAIA 182 (336)
Q Consensus 164 ~~~~s~~~~~~l~d~l~~~ 182 (336)
..++|.+++++++++|+..
T Consensus 171 a~t~s~t~~l~~l~~L~~~ 189 (384)
T 3c3j_A 171 AMTSSITTMMASCLAVFAP 189 (384)
T ss_dssp SCSHHHHHHHHHHHHHHCT
T ss_pred eehHHHHHHHHHHHHHHHh
Confidence 7788999999999988764
No 30
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.82 E-value=5.2e-20 Score=143.58 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=106.8
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcC-CCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDE-EYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~-~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
++|+++|.+...+++++++.++.++++.|.+++++.+||+++ +|+++|+++.+||+..+.... .....++.++| +++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~-~~~~~~v~~~m-~~~ 79 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKK-EFTKEIMLRAA-DEI 79 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSS-CCCHHHHHHHS-BCC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccC-ccchhhHHHhc-cCC
Confidence 578999987544779999999999999999999999999975 589999999999999876522 12256789999 667
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.|++++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~--~~~~~~Vvd~~g~lvGiit~~Dil~~ 124 (130)
T 3hf7_A 80 YFVPEGTPLSTQLVKFQRN--KKKVGLVVDEYGDIQGLVTVEDILEE 124 (130)
T ss_dssp CEEETTCBHHHHHHHHHHH--CCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred eEeCCCCcHHHHHHHHHhc--CCeEEEEEcCCCCEEEEeeHHHHHHH
Confidence 8999999999999999999 89999999988999999999999874
No 31
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=99.81 E-value=9.7e-20 Score=165.05 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=110.1
Q ss_pred HHhcCChhHHHHHHHHHH---cCCCeEEEEeccchHHHHHHHHHHHHhc--CCeeeecCCccccccccCCCCCCcEEEEE
Q 019775 34 FFQHLSLPHTLTFTQTLL---KCRGTIFFTGVGKSGFVANKISQTLISL--GIKSGFLNPLDALHGDIGILSSDDILVMF 108 (336)
Q Consensus 34 ~~~~~~~~~i~~~~~~i~---~a~~~I~i~G~G~s~~~a~~~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~dlvi~i 108 (336)
+.+.++.+.++++++.|. ++ ++|+++|+|+|+.+|.++.+.|.++ |+++....+.+........++++|++|+|
T Consensus 18 t~~~l~~~~i~~~~~~i~~~~~a-~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~i 96 (347)
T 3fkj_A 18 QGMSVAHENARRIISDILGKQNI-ERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILA 96 (347)
T ss_dssp CCCCHHHHHHHHHHHHHHTTSCC-CEEEEEESTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHSCCTTCSTTEEEEEE
T ss_pred HHhhcCHHHHHHHHHHHHhhCCC-CEEEEEEehHHHHHHHHHHHHHHHHhCCCeEEEeCcHHHHhhCcCCCCCCCEEEEE
Confidence 445567899999999999 88 6999999999999999999999976 89998887776665555568899999999
Q ss_pred eCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCC
Q 019775 109 SKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVE 155 (336)
Q Consensus 109 S~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~ 155 (336)
|+||+|++++++++.||++|+++|+||++.+||+++.||++|.++.+
T Consensus 97 S~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g 143 (347)
T 3fkj_A 97 SQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWA 143 (347)
T ss_dssp ESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEEECBCC
T ss_pred eCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEEEeccC
Confidence 99999999999999999999999999999999999999999999987
No 32
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.81 E-value=3.8e-20 Score=151.23 Aligned_cols=122 Identities=22% Similarity=0.337 Sum_probs=106.4
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcC----------------
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASG---------------- 271 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~---------------- 271 (336)
.++|+++|.++ ++++++++|+.+|++.|.+++++++||+|++|+++|+||.+||+.......
T Consensus 17 ~~~V~diM~~~--v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~ 94 (170)
T 4esy_A 17 QVPIRDILTSP--VVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPE 94 (170)
T ss_dssp TSBGGGGCCSC--CCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHH
T ss_pred CCCHHHhcCCC--CcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhh
Confidence 46899999987 669999999999999999999999999999999999999999975432110
Q ss_pred -----CchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 272 -----EGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 272 -----~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
......++.++|.+++.++.+++++.++++.|.++ +.+.+||+|+ |+++|+||+.||+++
T Consensus 95 ~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~--~~~~lpVvd~-g~lvGivt~~Dil~~ 159 (170)
T 4esy_A 95 VEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRH--GIHRIPVVQD-GVPVGIVTRRDLLKL 159 (170)
T ss_dssp HHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHT--TCSEEEEEET-TEEEEEEEHHHHTTT
T ss_pred HHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHc--CCcEEEEEEC-CEEEEEEEHHHHHHH
Confidence 00113578999999999999999999999999999 9999999986 999999999999975
No 33
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.81 E-value=2.8e-19 Score=173.78 Aligned_cols=180 Identities=13% Similarity=0.087 Sum_probs=148.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcCC---hhHHHHHH----HHHHcCCCeEEEEeccchHHHHHHHHHHHHh-cCCee
Q 019775 12 PHKVSENTLLDLFKSQQDHLNYFFQHLS---LPHTLTFT----QTLLKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKS 83 (336)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~i~~~~----~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~ 83 (336)
+.....+.+.+.+.++.+.++++.+... ...++.+. +.+.++ ++|+++|+|+|+.+|..+.+.+.+ .|.++
T Consensus 244 ~k~~~~~~m~keI~eqp~~~~~~l~~~~~~~~~~l~~~~~~~~~~i~~~-~~I~i~G~G~S~~~a~~~~~~~~~~~~~~~ 322 (608)
T 2bpl_A 244 DKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKV-EHIQILACGTSYNSGMVSRYWFESLAGIPC 322 (608)
T ss_dssp CCTTCSSHHHHHHHTHHHHHHHHHTTSEETTEECCGGGCTTHHHHHHHC-CEEEEEECHHHHHHHHHHHHHHHHHSCCCE
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhhhhcCccchhhhccchhhHhcCC-CEEEEEEehHHHHHHHHHHHHHHHHhCCCE
Confidence 3344567888889999999999998752 22244443 568888 699999999999999999988888 58888
Q ss_pred eecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcC-CeEEEEeCCCCCccccccCEEEEcCCCcccCCCC
Q 019775 84 GFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKG-AYLVSVTSVEGNALAAVCDMNVHLPVERELCPFD 162 (336)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g-~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~ 162 (336)
.+..+.+.. +....++++|++|+||+||+|++++++++.||++| +++|+||++.+|+|++.||+++.++.+.+ ..
T Consensus 323 ~~~~~~e~~-~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~~IaIT~~~~S~La~~ad~~l~~~~~~E---~~ 398 (608)
T 2bpl_A 323 DVEIASEFR-YRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTE---IG 398 (608)
T ss_dssp EEEEHHHHT-TSCCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEEECCCCCC---CS
T ss_pred EEEehhHhh-ccCCCCCCCCEEEEEeCCcCCHHHHHHHHHHHHcCCCeEEEEECCCCCHHHHhcCEEEEecCCce---ee
Confidence 776544432 22346789999999999999999999999999999 99999999999999999999999988765 45
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhhcCCChHHHhh
Q 019775 163 LAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAA 196 (336)
Q Consensus 163 ~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~~~~ 196 (336)
..++.|.+++++++++|+..+...++.+.+++.+
T Consensus 399 ~a~t~s~t~~l~~~~lL~~~l~~~~~~~~~~~~~ 432 (608)
T 2bpl_A 399 VASTKAFTTQLTVLLMLVAKLSKLKGLDASIEHD 432 (608)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ecchHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 5788999999999999999999988766555443
No 34
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.81 E-value=5.5e-20 Score=143.38 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=107.5
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++|+++|.+...+++++++.++.++++.|.+++++.+||+|++ |+++|+|+.+||+....... ...++.++|. +
T Consensus 5 ~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~---~~~~v~~~m~-~ 80 (130)
T 3i8n_A 5 DVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS---GQKQLGAVMR-P 80 (130)
T ss_dssp --CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT---TTSBHHHHSE-E
T ss_pred cCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC---CcCCHHHHhc-C
Confidence 46899999987667789999999999999999999999999977 89999999999999876533 2567899994 5
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.|++++
T Consensus 81 ~~~v~~~~~l~~~~~~m~~~--~~~~~~Vvd~~g~~vGivt~~dil~~ 126 (130)
T 3i8n_A 81 IQVVLNNTALPKVFDQMMTH--RLQLALVVDEYGTVLGLVTLEDIFEH 126 (130)
T ss_dssp CCEEETTSCHHHHHHHHHHH--TCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CcCcCCCCcHHHHHHHHHHc--CCeEEEEEcCCCCEEEEEEHHHHHHH
Confidence 78999999999999999999 89999999998999999999999874
No 35
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.81 E-value=1.6e-19 Score=143.94 Aligned_cols=120 Identities=18% Similarity=0.246 Sum_probs=108.6
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++|+++|.+...+++++++.++.++++.|.+++++.+||+|++ |+++|+||.+||+..+.... ..++.++| ++
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m-~~ 96 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEIL-RD 96 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGGTC-BC
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHHhc-CC
Confidence 46899999994446799999999999999999999999999987 89999999999999876532 46789999 88
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 97 ~~~v~~~~~l~~~~~~m~~~--~~~~l~Vvd~~g~~~Giit~~dil~~ 142 (148)
T 3lv9_A 97 IIYISENLTIDKALERIRKE--KLQLAIVVDEYGGTSGVVTIEDILEE 142 (148)
T ss_dssp CEEEETTSBHHHHHHHHHHH--TCSEEEEECTTSSEEEEEEHHHHHHH
T ss_pred CeEECCCCCHHHHHHHHHhc--CCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 89999999999999999999 89999999998999999999999874
No 36
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=99.81 E-value=2.5e-19 Score=161.48 Aligned_cols=117 Identities=21% Similarity=0.256 Sum_probs=107.8
Q ss_pred hhHHHHHHHHHH--cCCCeEEEEeccchHHHHHHHHHHHHhc--CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcH
Q 019775 40 LPHTLTFTQTLL--KCRGTIFFTGVGKSGFVANKISQTLISL--GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTE 115 (336)
Q Consensus 40 ~~~i~~~~~~i~--~a~~~I~i~G~G~s~~~a~~~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~ 115 (336)
.++++++++.|. ++ ++|+++|+|+|+.+|.++++.|.++ |+++....+.+........++++|++|++|+||+|+
T Consensus 10 ~~~i~~~v~~i~~~~~-~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~~e~~~~~~~~l~~~dlvI~iS~SG~T~ 88 (329)
T 3eua_A 10 NREVQAFLQDLKGKTI-DHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYSANEFIQRNPVQLGEKSLVILCSHSGNTP 88 (329)
T ss_dssp CHHHHHHHHHHTTCCC-CEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEEHHHHHHHCCTTCSTTEEEEEEESSSCCH
T ss_pred HHHHHHHHHHHHHCCC-CEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEccHHHHhcCccCCCCCcEEEEEcCCCCCH
Confidence 478999999999 78 6999999999999999999999987 999999887766655555688999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
+++++++.||++|+++|+||++.+||+++.||++|.++.+.+
T Consensus 89 e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g~e 130 (329)
T 3eua_A 89 ETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVAQYDWGDE 130 (329)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEEECCCSTT
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEeCCCCc
Confidence 999999999999999999999999999999999999998766
No 37
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.80 E-value=6.5e-20 Score=142.38 Aligned_cols=120 Identities=16% Similarity=0.253 Sum_probs=106.3
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
++|+++|.+...+++++++.++.++++.|.+++++.+||+|++ |+++|+||.+||+..+.... ...++.++|.+ +
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~---~~~~v~~~m~~-~ 78 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA---EAFSMDKVLRT-A 78 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC---CCCCHHHHCBC-C
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC---CCCCHHHHcCC-C
Confidence 5789999975446689999999999999999999999999987 89999999999998764322 25678999965 6
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 79 ~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~~~Giit~~dll~~ 123 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQ--RYHMAIVIDEFGGVSGLVTIEDILEL 123 (127)
T ss_dssp CEEETTCBHHHHHHHHHHT--TCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred eEECCCCcHHHHHHHHHhc--CCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 7899999999999999999 99999999988999999999999875
No 38
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.80 E-value=3.3e-19 Score=137.14 Aligned_cols=117 Identities=23% Similarity=0.276 Sum_probs=107.1
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCe
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPR 288 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (336)
++|+++|.++ +++++++.++.++++.|.+++.+.+||+|++|+++|+++.+|+...+... ..++.++|.+++.
T Consensus 1 ~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~-----~~~v~~~~~~~~~ 73 (122)
T 3kpb_A 1 TLVKDILSKP--PITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN-----KKTIEEIMTRNVI 73 (122)
T ss_dssp CBHHHHCCSC--CCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT-----CCBGGGTSBSSCC
T ss_pred CchHHhhCCC--CEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc-----ccCHHHHhcCCCe
Confidence 3689999987 56999999999999999999999999999899999999999999987652 2479999999999
Q ss_pred eeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 289 TIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 289 ~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.+.+++++.++++.|.++ +.+.+||+|++|+++|+||..||+++
T Consensus 74 ~v~~~~~l~~~~~~~~~~--~~~~l~Vvd~~g~~~Givt~~dl~~~ 117 (122)
T 3kpb_A 74 TAHEDEPVDHVAIKMSKY--NISGVPVVDDYRRVVGIVTSEDISRL 117 (122)
T ss_dssp CEETTSBHHHHHHHHHHH--TCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHh--CCCeEEEECCCCCEEEEEeHHHHHHH
Confidence 999999999999999998 89999999998999999999999874
No 39
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=1.6e-19 Score=146.73 Aligned_cols=135 Identities=17% Similarity=0.261 Sum_probs=115.5
Q ss_pred cCCCCchhhhhhhhhhhccccC-CCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchh
Q 019775 197 NHPAGRIGKSLIFKVQDVMKPQ-KELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIF 275 (336)
Q Consensus 197 ~~~~~~~~~~~~~~v~~im~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~ 275 (336)
.++.........++|+++|.+. ..++++++++++.++++.|.+++++.+||+|++|+++|+|+.+||...+........
T Consensus 12 ~~~~~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~ 91 (165)
T 3fhm_A 12 SGRENLYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASL 91 (165)
T ss_dssp ----CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGG
T ss_pred cccchhhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccc
Confidence 3445555556678999999973 225699999999999999999999999999988999999999999988776432334
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
..++.++|.+++.++.+++++.++++.|.++ +...+||+|+ |+++|+||..||+++
T Consensus 92 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~-g~~~Giit~~dil~~ 147 (165)
T 3fhm_A 92 QQSVSVAMTKNVVRCQHNSTTDQLMEIMTGG--RFRHVPVEEN-GRLAGIISIGDVVKA 147 (165)
T ss_dssp TSBGGGTSBSSCCCBCTTCBHHHHHHHHHHH--TCSEEEEEET-TEEEEEEEHHHHHHH
T ss_pred cCCHHHHhcCCCeEECCCCcHHHHHHHHHHc--CCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 6789999999999999999999999999999 8999999999 999999999999875
No 40
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.80 E-value=1.3e-19 Score=141.02 Aligned_cols=119 Identities=15% Similarity=0.219 Sum_probs=104.8
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++|+++|.|...+++++++.++.++++.|.+++++++||+|++ |+++|+||.+||+..+.. ...++.++|.+
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-----~~~~v~~~m~~- 77 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE-----PALDIRSLVRP- 77 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC-----TTSCGGGGCBC-
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc-----CCcCHHHHhCC-
Confidence 35799999975557799999999999999999999999999975 899999999999876542 24678889865
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.|++++
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~--~~~~~pVvd~~g~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRAS--RNHLAIVIDEHGGISGLVTMEDVLEQ 123 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTS--SCCEEEEECC-CCEEEEEEHHHHHHH
T ss_pred CeEeCCCCcHHHHHHHHHhc--CCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 77999999999999999999 99999999998999999999999874
No 41
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.79 E-value=1.2e-19 Score=142.66 Aligned_cols=121 Identities=15% Similarity=0.173 Sum_probs=107.2
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
++|+++|.+...+++++++.++.++++.|.+++++.+||++++ |+++|+||.+||+..+.... ....++.++|.+ +
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~--~~~~~v~~~m~~-~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD--GDSDDVKKLLRP-A 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS--GGGCCGGGTCBC-C
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc--CCCcCHHHHcCC-C
Confidence 5789999975557799999999999999999999999999987 79999999999998765211 235689999976 8
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~--~~~~~~Vvd~~g~lvGiit~~Dil~~ 124 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRAN--HNHMAIVIDEYGGVAGLVTIEDVLEQ 124 (136)
T ss_dssp CEEETTCBHHHHHHHHHHH--TCCEEEEECTTSCEEEEEEHHHHHTT
T ss_pred eEECCCCcHHHHHHHHHhc--CCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 8999999999999999999 89999999998999999999999875
No 42
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.79 E-value=2.9e-19 Score=146.29 Aligned_cols=121 Identities=14% Similarity=0.193 Sum_probs=107.7
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
..++|+++|.|...++++++++++.++++.|.+++++.+||+|++ ++++|+||.+||+....... ..++.++| +
T Consensus 40 ~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~im-~ 114 (172)
T 3lhh_A 40 DERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE----RLELVDLV-K 114 (172)
T ss_dssp ---CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC----CCCGGGGC-B
T ss_pred CCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC----cccHHHHh-c
Confidence 356899999965457799999999999999999999999999987 89999999999999876532 56799999 8
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +...+||+|++|+++|+||+.||+++
T Consensus 115 ~~~~v~~~~~l~~a~~~m~~~--~~~~~pVvd~~g~lvGiit~~Dil~~ 161 (172)
T 3lhh_A 115 NCNFVPNSLSGMELLEHFRTT--GSQMVFVVDEYGDLKGLVTLQDMMDA 161 (172)
T ss_dssp CCEEEETTCCHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCeEeCCCCCHHHHHHHHHHc--CCeEEEEEeCCCCEEEEeeHHHHHHH
Confidence 889999999999999999999 89999999998999999999999874
No 43
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=99.79 E-value=3.3e-19 Score=160.52 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCccccccccCCCCC
Q 019775 23 LFKSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDALHGDIGILSS 101 (336)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~ 101 (336)
.+.++.+.+++ ... .++++++.+.++ ++|+++|+|+|+.+|.++++.|.+ .|+++. ..+.+. ......+++
T Consensus 6 eI~eqP~~~~~-~~~----~~~~~~~~l~~~-~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~-~~~se~-~~~~~~~~~ 77 (325)
T 2e5f_A 6 EIKQTPDGIIK-ADK----VFNKVKDKISLP-NRILYLGCGSSHFLSKLLAMVTNMHGGLGIA-LPCSEF-LYSKETYPI 77 (325)
T ss_dssp HHTTHHHHHHH-HHH----HHHHHTTTCCCC-SEEEEEESTHHHHHHHHHHHHHHHTTSEEEE-EEHHHH-HHHGGGSCC
T ss_pred HHHHHHHHHHH-cCc----cHHHHHHHHhCC-CEEEEEEChHHHHHHHHHHHHHHHHhCCCEE-EechHH-hhcCcccCC
Confidence 34444555555 221 277777788888 699999999999999999999999 799988 544443 333345889
Q ss_pred C--cEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHH
Q 019775 102 D--DILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTV 179 (336)
Q Consensus 102 ~--dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l 179 (336)
+ |++|+||+||+|++++++++.|| +++|+||++ +||+++.||++|.++. .+ .....++|.+++++++++|
T Consensus 78 ~~~dlvI~iS~SG~T~e~l~a~~~ak---a~viaIT~~-~S~La~~ad~~l~~~~-~e---~~~a~t~s~~~~l~~l~~L 149 (325)
T 2e5f_A 78 GEVELAVGISRSGETTEILLALEKIN---VKKLGITTR-ESSLTRMCDYSLVVPA-IE---ESVVMTHSFTSFYFAYLQL 149 (325)
T ss_dssp CSCSEEEEECSSSCCHHHHHHHHTCC---SCEEEEESS-SCHHHHHSSEEEECCC-CC---CSSSCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHhC---CCEEEEECC-CCHHHHhcCEEEecCC-cc---ceecccHHHHHHHHHHHHH
Confidence 9 99999999999999999999999 999999999 9999999999999988 44 3557899999999999999
Q ss_pred HHHHHhh
Q 019775 180 AIAMMGA 186 (336)
Q Consensus 180 ~~~~~~~ 186 (336)
+..+...
T Consensus 150 ~~~~~~~ 156 (325)
T 2e5f_A 150 LRYSYGL 156 (325)
T ss_dssp HHHHTTC
T ss_pred HHHHHHH
Confidence 9988665
No 44
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.79 E-value=5.9e-19 Score=140.92 Aligned_cols=125 Identities=15% Similarity=0.239 Sum_probs=108.7
Q ss_pred hhhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCC----chhhhhHhh
Q 019775 206 SLIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGE----GIFKLTVGE 281 (336)
Q Consensus 206 ~~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~----~~~~~~i~~ 281 (336)
-..++|+++|.+...++++++++++.++++.|.+++++.+||+|++|+++|+||.+||...+..... .....++.+
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 91 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ 91 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH
Confidence 3567999999975346799999999999999999999999999989999999999999988753211 123578999
Q ss_pred hcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 282 MCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 282 ~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+|.+++.++.+++++.++++.|.++ +. +||+|++|+++|+||+.||+++
T Consensus 92 ~m~~~~~~v~~~~~l~~a~~~~~~~--~~--l~Vvd~~g~~~Giit~~dil~~ 140 (150)
T 3lqn_A 92 VMKQDIPVLKLEDSFAKALEMTIDH--PF--ICAVNEDGYFEGILTRRAILKL 140 (150)
T ss_dssp TCBSSCCEEETTCBHHHHHHHHHHC--SE--EEEECTTCBEEEEEEHHHHHHH
T ss_pred HhcCCCceeCCCCCHHHHHHHHHhC--CE--EEEECCCCcEEEEEEHHHHHHH
Confidence 9999999999999999999999988 65 9999988999999999999874
No 45
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.78 E-value=2e-18 Score=138.74 Aligned_cols=125 Identities=20% Similarity=0.297 Sum_probs=108.3
Q ss_pred hhhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCc---hhhhhHhhh
Q 019775 206 SLIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEG---IFKLTVGEM 282 (336)
Q Consensus 206 ~~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~---~~~~~i~~~ 282 (336)
....+++++|.|...+++++++.++.++++.|.+++++.+||+|++|+++|+||.+||...+...... ....++.++
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~ 91 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM 91 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGG
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHh
Confidence 34668999999755577999999999999999999999999999889999999999999987653211 114679999
Q ss_pred cCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 283 CNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 283 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|.+++.++.+++++.++++.|.++ + .+||+|++|+++|+||+.||+++
T Consensus 92 m~~~~~~v~~~~~l~~a~~~~~~~--~--~lpVvd~~g~~~Giit~~dil~~ 139 (156)
T 3ctu_A 92 TKTDVAVVSPDFTITEVLHKLVDE--S--FLPVVDAEGIFQGIITRKSILKA 139 (156)
T ss_dssp CBCSCCCBCSSCCHHHHHHHTTTS--S--EEEEECTTSBEEEEEETTHHHHH
T ss_pred ccCCceeeCCCCcHHHHHHHHHHc--C--eEEEEcCCCeEEEEEEHHHHHHH
Confidence 999999999999999999999987 5 69999988999999999999874
No 46
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.78 E-value=1.4e-18 Score=134.09 Aligned_cols=119 Identities=24% Similarity=0.303 Sum_probs=106.2
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCe
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPR 288 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (336)
|+|+++|.++ +++++++.++.++++.|.+++.+.+||+| +|+++|+++.+|+...+... ......++.++|.+++.
T Consensus 1 m~v~~~m~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~-~~~~~~~v~~~m~~~~~ 76 (125)
T 1pbj_A 1 MRVEDVMVTD--VDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEG-DDLAEVKVWEVMERDLV 76 (125)
T ss_dssp -CHHHHCBCS--CCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHT-CCTTTSBHHHHCBCGGG
T ss_pred CCHHHhcCCC--ceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcC-CcccccCHHHHcCCCCe
Confidence 5789999986 56999999999999999999999999999 89999999999999876542 22235789999999999
Q ss_pred eeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 289 TIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 289 ~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.+++++.++++.|.++ +.+.+||+|+ |+++|+||+.|++++
T Consensus 77 ~v~~~~~l~~~~~~~~~~--~~~~l~Vvd~-~~~~Gvit~~dl~~~ 119 (125)
T 1pbj_A 77 TISPRATIKEAAEKMVKN--VVWRLLVEED-DEIIGVISATDILRA 119 (125)
T ss_dssp EECTTSCHHHHHHHHHHH--TCSEEEEEET-TEEEEEEEHHHHHHH
T ss_pred EECCCCCHHHHHHHHHhc--CCcEEEEEEC-CEEEEEEEHHHHHHH
Confidence 999999999999999999 8999999999 999999999999874
No 47
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.78 E-value=6e-19 Score=141.47 Aligned_cols=120 Identities=19% Similarity=0.223 Sum_probs=107.3
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEE-cC-CCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVI-DE-EYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVv-d~-~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
.++|+++|.+...+++++++.++.++++.|.+++++.+||+ ++ +|+++|+||.+||+..+.... ..++.++| +
T Consensus 19 ~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m-~ 93 (153)
T 3oco_A 19 DKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----KAKISTIM-R 93 (153)
T ss_dssp HCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----TSBGGGTC-B
T ss_pred CCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----CCcHHHHh-C
Confidence 56899999973336699999999999999999999999999 64 489999999999998876532 56899999 8
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +...+||+|++|+++|+||+.||+++
T Consensus 94 ~~~~v~~~~~l~~~~~~m~~~--~~~~lpVvd~~g~~vGivt~~dil~~ 140 (153)
T 3oco_A 94 DIVSVPENMKVPDVMEEMSAH--RVPMAIVIDEYGGTSGIITDKDVYEE 140 (153)
T ss_dssp CCEEEETTSBHHHHHHHHHHT--TCSCEEEECTTSCEEEEECHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHHc--CCcEEEEEeCCCCEEEEeeHHHHHHH
Confidence 889999999999999999999 89999999998999999999999874
No 48
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.77 E-value=1.9e-18 Score=136.52 Aligned_cols=120 Identities=15% Similarity=0.233 Sum_probs=107.3
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCC--cEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEY--HLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~--~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
.++|+++|.+. ++++++++++.++++.|.+++++.+||+|++| +++|+|+.+||+..+.... ....++.++|.+
T Consensus 4 ~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~--~~~~~v~~~m~~ 79 (141)
T 2rih_A 4 AIRTSELLKRP--PVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL--DLDGPAMPIANS 79 (141)
T ss_dssp -CBGGGGCCSC--CEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC--CTTSBSGGGCBC
T ss_pred ceEHHHHhcCC--CeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC--CCCCCHHHHcCC
Confidence 46899999986 56899999999999999999999999999888 9999999999998775421 125789999999
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.++ ++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 80 ~~~~v~~~-~l~~a~~~m~~~--~~~~l~Vvd~~g~~~Giit~~dll~~ 125 (141)
T 2rih_A 80 PITVLDTD-PVHVAAEKMRRH--NIRHVVVVNKNGELVGVLSIRDLCFE 125 (141)
T ss_dssp CCEEETTS-BHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHHSC
T ss_pred CCeEEcCC-CHHHHHHHHHHc--CCeEEEEEcCCCcEEEEEEHHHHHHH
Confidence 99999999 999999999999 89999999988999999999999864
No 49
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.77 E-value=5.3e-19 Score=137.34 Aligned_cols=120 Identities=18% Similarity=0.281 Sum_probs=107.0
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
.++++++|.++ ++++++++++.++++.|.+++++.+||+|+ |+++|+|+.+||...+..... ...++.++|.+++
T Consensus 4 s~~v~~~m~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~--~~~~v~~~m~~~~ 78 (128)
T 3gby_A 4 SVTFSYLAETD--YPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT--VKEKLGEELLETV 78 (128)
T ss_dssp TCBGGGGCBCC--SCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC--TTCBCCGGGCBCC
T ss_pred ceEHHHhhcCC--cceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc--ccCcHHHHccCCC
Confidence 46899999998 559999999999999999999999999998 999999999999976543221 1367899999999
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +...+||+|++|+++|+||+.|++++
T Consensus 79 ~~v~~~~~l~~~~~~~~~~--~~~~lpVvd~~g~~~Giit~~dll~~ 123 (128)
T 3gby_A 79 RSYRPGEQLFDNLISVAAA--KCSVVPLADEDGRYEGVVSRKRILGF 123 (128)
T ss_dssp CCBCTTSBGGGSHHHHHHC--SSSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cEECCCCCHHHHHHHHHhC--CCcEEEEECCCCCEEEEEEHHHHHHH
Confidence 9999999999999999999 89999999988999999999999874
No 50
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=99.77 E-value=4.6e-18 Score=156.14 Aligned_cols=162 Identities=18% Similarity=0.148 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCh--hHHHHHHHHHHcC-CCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCcccc
Q 019775 17 ENTLLDLFKSQQDHLNYFFQHLSL--PHTLTFTQTLLKC-RGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDAL 92 (336)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~--~~i~~~~~~i~~a-~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~ 92 (336)
...+.+-+.++.+.++++++.... ..++++++.+.+. .+||+++|+|+|+.+|..++++|.++ |.++..+++....
T Consensus 18 ~~~m~kEI~eQP~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~g~~v~ai~~~~~~ 97 (393)
T 3odp_A 18 GYITAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPNAKIVITGAGSSAFVGNSVVSYLNAKENIKIEAIATTDIV 97 (393)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEEEECSTHHHHHHHTTHHHHHHHSSSEEEECCHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCCeEEeCcHHHH
Confidence 456666777888888888876432 3466666666532 26999999999999999999999985 8898877654443
Q ss_pred ccccC--CCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEEEEeCCCCCccccccC-----EEEEcCCCcccCCCCC
Q 019775 93 HGDIG--ILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLVSVTSVEGNALAAVCD-----MNVHLPVERELCPFDL 163 (336)
Q Consensus 93 ~~~~~--~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi~IT~~~~s~l~~~ad-----~~i~~~~~~~~~~~~~ 163 (336)
..... ..+++|++|+||+||+|++++++++.||++ |+++|+||++.+|+|++.|| +++.++.+.. +...
T Consensus 98 ~~~~~~~~~~~~dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD~~~~~~~i~~~~~~~--E~~v 175 (393)
T 3odp_A 98 SHPFYYLKKDEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYNSFLLLMPEESN--DKGF 175 (393)
T ss_dssp TCGGGTCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGGSSSCEEEEECCGGGS--CCSS
T ss_pred hhhHHhcCCCCCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhcCCCceEEEEcCCccc--cccc
Confidence 32221 227999999999999999999999999999 99999999999999999999 5888877522 2445
Q ss_pred CChhHHHHHHHHHHHHH
Q 019775 164 APVTSTAIQMVFGDTVA 180 (336)
Q Consensus 164 ~~~~s~~~~~~l~d~l~ 180 (336)
..+.|.++++..+-+|+
T Consensus 176 a~Tksft~ql~~l~ll~ 192 (393)
T 3odp_A 176 AMTGSFSTMLLSCLLIF 192 (393)
T ss_dssp SCSHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHH
Confidence 77888888877655543
No 51
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.77 E-value=2.5e-18 Score=134.71 Aligned_cols=121 Identities=19% Similarity=0.373 Sum_probs=106.1
Q ss_pred hhhhccccC-CCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCe
Q 019775 210 KVQDVMKPQ-KELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPR 288 (336)
Q Consensus 210 ~v~~im~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (336)
+|+++|.|. ..++++++++++.++++.|.+++++.+||+| +|+++|+|+.+||+..+...+......++.++|.+++.
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVA 85 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCe
Confidence 889999831 2266999999999999999999999999998 89999999999999755543333346789999999999
Q ss_pred eeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 289 TIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 289 ~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.+++++.++++.|.++ +.+.+||+| +|+++|+||..|++++
T Consensus 86 ~v~~~~~l~~~~~~m~~~--~~~~lpVvd-~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 86 YVDLNNTNEDCMALITEM--RVRHLPVLD-DGKVIGLLSIGDLVKD 128 (135)
T ss_dssp CBCTTCBHHHHHHHHHHH--TCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHh--CCCEEEEEe-CCEEEEEEEHHHHHHH
Confidence 999999999999999999 899999999 5999999999999864
No 52
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=1.1e-18 Score=139.36 Aligned_cols=125 Identities=23% Similarity=0.341 Sum_probs=106.5
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcC------------Cchh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASG------------EGIF 275 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~------------~~~~ 275 (336)
.++|+++|.+...++++++++++.++++.|.+++++.+||+|++|+++|+|+.+||...+.... ....
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTN 83 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhc
Confidence 3689999999544679999999999999999999999999998899999999999985322110 1112
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
..++.++|.+++.++.+++++.++++.|.++ +...+||+|++|+++|+||+.||+++
T Consensus 84 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~--~~~~l~Vvd~~g~~~Giit~~dil~~ 140 (152)
T 4gqw_A 84 GKLVGDLMTPAPLVVEEKTNLEDAAKILLET--KYRRLPVVDSDGKLVGIITRGNVVRA 140 (152)
T ss_dssp CCBHHHHSEESCCCEESSSBHHHHHHHHHHS--SCCEEEEECTTSBEEEEEEHHHHHHH
T ss_pred cccHHHhcCCCceEECCCCcHHHHHHHHHHC--CCCEEEEECCCCcEEEEEEHHHHHHH
Confidence 4689999999899999999999999999999 89999999988999999999999874
No 53
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.76 E-value=5.1e-18 Score=133.36 Aligned_cols=121 Identities=26% Similarity=0.439 Sum_probs=106.4
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHH-HHHHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDL-RRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl-~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++++++|.+. +++++++.++.++++.|.+++.+.+||+|++|+++|+++.+|+ ...+.... ....++.++|.++
T Consensus 7 ~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~--~~~~~v~~~m~~~ 82 (138)
T 2p9m_A 7 NIKVKDVMTKN--VITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY--TLETTIGDVMTKD 82 (138)
T ss_dssp TCBGGGTSBCS--CCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC--CSSCBHHHHSCSS
T ss_pred cCCHHHhhcCC--ceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc--cCCcCHHHHhCCC
Confidence 46889999876 5589999999999999999999999999988999999999999 77654321 1256899999999
Q ss_pred CeeeCCCccHHHHHHHhcCCCCC-----ccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSP-----VQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~-----~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ + .+.+||+|++|+++|+||..|+++.
T Consensus 83 ~~~v~~~~~l~~~~~~~~~~--~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~ 133 (138)
T 2p9m_A 83 VITIHEDASILEAIKKMDIS--GKKEEIINQLPVVDKNNKLVGIISDGDIIRT 133 (138)
T ss_dssp CCCEETTSBHHHHHHHHTCC-------CCCEEEEECTTSBEEEEEEHHHHHHH
T ss_pred cEEECCCCCHHHHHHHHHhc--CCccccccEEEEECCCCeEEEEEEHHHHHHH
Confidence 99999999999999999999 8 9999999988999999999999864
No 54
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.76 E-value=1.6e-18 Score=135.48 Aligned_cols=121 Identities=25% Similarity=0.335 Sum_probs=106.3
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHH-HHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR-TLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~-~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++++++|.+. +++++++.++.++++.|.+++.+.+||+|++|+++|+|+.+|+.. .+.. +......++.++|.++
T Consensus 7 ~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-~~~~~~~~v~~~m~~~ 83 (133)
T 1y5h_A 7 MTTARDIMNAG--VTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA-GLDPNTATAGELARDS 83 (133)
T ss_dssp -CCHHHHSEET--CCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG-TCCTTTSBHHHHHTTC
T ss_pred hcCHHHHhcCC--ceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc-CCCccccCHHHHhcCC
Confidence 35899999986 558999999999999999999999999988899999999999984 4332 2222357899999999
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +.+.+||+|+ |+++|+||+.||+++
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~--~~~~l~Vvd~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 84 IYYVDANASIQEMLNVMEEH--QVRRVPVISE-HRLVGIVTEADIARH 128 (133)
T ss_dssp CCCEETTCCHHHHHHHHHHH--TCSEEEEEET-TEEEEEEEHHHHHHT
T ss_pred CEEECCCCCHHHHHHHHHHc--CCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 99999999999999999999 8999999999 999999999999875
No 55
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.76 E-value=7e-19 Score=141.58 Aligned_cols=119 Identities=16% Similarity=0.208 Sum_probs=105.5
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCC-cEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEY-HLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~-~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++|+++|.+...+++++++.++.++++.|.+++++.+||+|+++ +++|+||.+||+..+... ...++.++|.+
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~----~~~~v~~im~~- 111 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP----EQFHLKSILRP- 111 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG----GGCCHHHHCBC-
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC----CcccHHHHcCC-
Confidence 568999999844467999999999999999999999999999774 999999999999765432 35789999976
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhh
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVS 333 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~ 333 (336)
+.++.+++++.++++.|.++ +...+||+|++|+++|+||+.||++
T Consensus 112 ~~~v~~~~~l~~a~~~m~~~--~~~~~~Vvd~~g~~~Givt~~Dile 156 (156)
T 3oi8_A 112 AVFVPEGKSLTALLKEFREQ--RNHMAIVIDEYGGTSGLVTFEDIIE 156 (156)
T ss_dssp CCEEETTSBHHHHHHHHHHT--TCCEEEEECTTSSEEEEEEHHHHCC
T ss_pred CEEECCCCCHHHHHHHHHhc--CCeEEEEECCCCCEEEEEEHHHhcC
Confidence 78999999999999999999 8999999999899999999999873
No 56
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.76 E-value=1.8e-18 Score=141.60 Aligned_cols=119 Identities=17% Similarity=0.192 Sum_probs=104.5
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
.++|+++|.|...+++++++.++.++++.|.+++++.+||++++ ++++|+|+.+||+..+.... ..++. ++ ++
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~----~~~v~-~~-~~ 108 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG----RVRRN-RL-RD 108 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----SCCGG-GS-BC
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----cchhH-hc-CC
Confidence 46899999875457789999999999999999999999999976 89999999999998876432 34566 44 66
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +...+||+|++|+++|+||+.||+++
T Consensus 109 ~~~v~~~~~l~~al~~m~~~--~~~~~~Vvde~g~lvGiIT~~Dil~~ 154 (173)
T 3ocm_A 109 PIIVHESIGILRLMDTLKRS--RGQLVLVADEFGAIEGLVTPIDVFEA 154 (173)
T ss_dssp CCEECGGGCHHHHHHHHHHS--TTCCEEEECTTCCEEEEECHHHHHHH
T ss_pred CeEECCCCcHHHHHHHHHHc--CCeEEEEEeCCCCEEEEEeHHHHHHH
Confidence 78999999999999999999 89999999988999999999999864
No 57
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.76 E-value=3.8e-18 Score=137.85 Aligned_cols=122 Identities=20% Similarity=0.299 Sum_probs=107.1
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcC-------CchhhhhHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASG-------EGIFKLTVG 280 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~-------~~~~~~~i~ 280 (336)
.++|+++|.+. +++++++.++.++++.|.+++++.+||+|++|+++|+|+.+||+..+.... ......++.
T Consensus 4 ~~~v~dim~~~--~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 4 MIKVEDMMTRH--PHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CCBGGGTSEES--CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred cCcHHHHhcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 35789999986 558999999999999999999999999998899999999999998765311 111256899
Q ss_pred hhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 281 EMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 281 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++|.+++.++.+++++.++++.|.++ +...+||+|+ |+++|+||+.||+++
T Consensus 82 ~im~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~-g~lvGiit~~dil~~ 132 (160)
T 2o16_A 82 EVMHTDVTSVAPQAGLKESAIYMQKH--KIGCLPVVAK-DVLVGIITDSDFVTI 132 (160)
T ss_dssp HHSCSCEEEBCTTSBHHHHHHHHHHT--TCSCEEEEET-TEEEEEECHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHh--CCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 99999999999999999999999999 8999999999 999999999999874
No 58
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.76 E-value=3.2e-18 Score=140.76 Aligned_cols=124 Identities=30% Similarity=0.420 Sum_probs=105.9
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcC-----------------
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASG----------------- 271 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~----------------- 271 (336)
++|+++|.+...+++++++.++.+++++|.+++++.+||+|++|+++|+|+.+||+......+
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 578999998433669999999999999999999999999998899999999999984221000
Q ss_pred ---------CchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 272 ---------EGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 272 ---------~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
......++.++|.+++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLET--KFRRLPVVDADGKLIGILTRGNVVRA 153 (180)
T ss_dssp SHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTS--TTCEEEEECTTCBEEEEEEHHHHHHH
T ss_pred hhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHc--CCCEEEEECCCCeEEEEEEHHHHHHH
Confidence 01124679999999899999999999999999999 99999999988999999999999874
No 59
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.76 E-value=3.7e-18 Score=133.35 Aligned_cols=119 Identities=23% Similarity=0.335 Sum_probs=106.7
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCe
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPR 288 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~ 288 (336)
++|+++|.+. +++++++.++.++++.|.+++.+.+||+| +|+++|+++.+|+...+..... ...++.++|.+++.
T Consensus 4 ~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~--~~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 4 EIVKEYMKTQ--VISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS--LETKAEEFMTASLI 78 (133)
T ss_dssp CBGGGTSBCS--CCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC--TTCBGGGTSEECCC
T ss_pred ccHHHhccCC--CEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC--cccCHHHHcCCCCE
Confidence 5789999986 55899999999999999999999999999 8999999999999987764321 25689999988889
Q ss_pred eeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 289 TIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 289 ~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.+++++.++++.|.++ +.+.+||+|++|+++|+||..|++++
T Consensus 79 ~v~~~~~l~~~~~~~~~~--~~~~l~Vvd~~g~~~Giit~~dll~~ 122 (133)
T 2ef7_A 79 TIREDSPITGALALMRQF--NIRHLPVVDDKGNLKGIISIRDITRA 122 (133)
T ss_dssp CEETTSBHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHc--CCCEEEEECCCCeEEEEEEHHHHHHH
Confidence 999999999999999999 89999999988999999999999864
No 60
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.76 E-value=5e-18 Score=140.40 Aligned_cols=123 Identities=12% Similarity=0.200 Sum_probs=109.6
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
.++|+++|.+. ++++++++++.+++++|.+++++.+||+|++|+++|+++.+||+..+..........++.++|.+++
T Consensus 8 ~~~v~~im~~~--~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 8 FMRVEKIMNSN--FKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CCBGGGTSBTT--CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred ccCHHHhcCCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 36899999876 5699999999999999999999999999988999999999999987654222234578999999989
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +.+.+||+|++|+++|+||..||+++
T Consensus 86 ~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSEN--GLERCAVVDDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp CEEETTCBHHHHHHHHHHH--TCSEEEEECTTCCEEEEEEHHHHTTT
T ss_pred cEECCCCCHHHHHHHHHHc--CCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 9999999999999999999 89999999988999999999999874
No 61
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.75 E-value=5e-18 Score=133.45 Aligned_cols=121 Identities=21% Similarity=0.340 Sum_probs=106.0
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
.++|+++|.++ +++++++.++.++++.|.+++++.+||+|++|+++|+|+.+||.......+. ....++.++|.+++
T Consensus 6 ~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~~ 82 (138)
T 2yzi_A 6 KAPIKVYMTKK--LLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTRNL 82 (138)
T ss_dssp TSBGGGTCBCC--CCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBCSC
T ss_pred hhhHHHHhcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhCCC
Confidence 35889999976 5699999999999999999999999999988999999999999754332222 23578999999999
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +.+.+ |+|++|+++|+||..||+++
T Consensus 83 ~~v~~~~~l~~~~~~m~~~--~~~~l-Vvd~~g~~~Giit~~dil~~ 126 (138)
T 2yzi_A 83 ITANVNTPLGEVLRKMAEH--RIKHI-LIEEEGKIVGIFTLSDLLEA 126 (138)
T ss_dssp CEEETTSBHHHHHHHHHHH--TCSEE-EEEETTEEEEEEEHHHHHHH
T ss_pred eEECCCCcHHHHHHHHHhc--CCCEE-EECCCCCEEEEEEHHHHHHH
Confidence 9999999999999999999 89999 99977999999999999864
No 62
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.75 E-value=5.4e-18 Score=136.75 Aligned_cols=124 Identities=17% Similarity=0.201 Sum_probs=107.1
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCC----chhhhhHhhh
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGE----GIFKLTVGEM 282 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~----~~~~~~i~~~ 282 (336)
..++|+++|.+...++++++++++.++++.|.+++++.+||+|++|+++|+|+..||...+..... .....++.++
T Consensus 12 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~ 91 (159)
T 1yav_A 12 LEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEV 91 (159)
T ss_dssp TTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHH
T ss_pred hHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHh
Confidence 356899999982225699999999999999999999999999988999999999999987754211 0235789999
Q ss_pred cCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 283 CNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 283 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|.+++.++.+++++.++++.|.++ +. +||+|++|+++|+||+.||+++
T Consensus 92 m~~~~~~v~~~~~l~~a~~~m~~~--~~--lpVvd~~g~~vGiit~~dil~~ 139 (159)
T 1yav_A 92 MLTDIPRLHINDPIMKGFGMVINN--GF--VCVENDEQVFEGIFTRRVVLKE 139 (159)
T ss_dssp SBCSCCEEETTSBHHHHHHHTTTC--SE--EEEECTTCBEEEEEEHHHHHHH
T ss_pred cCCCCceEcCCCCHHHHHHHHHhC--CE--EEEEeCCCeEEEEEEHHHHHHH
Confidence 999999999999999999999988 66 9999988999999999999864
No 63
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.75 E-value=5.1e-18 Score=136.93 Aligned_cols=121 Identities=20% Similarity=0.308 Sum_probs=107.7
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC--
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR-- 285 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~-- 285 (336)
.++|+++|.+ + ++++++.++.++++.|.+++++.+||+|++|+++|+||.+||+..+... ......++.++|.+
T Consensus 16 ~~~v~~im~~-~--~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-~~~~~~~v~~~m~~~~ 91 (159)
T 3fv6_A 16 KLQVKDFQSI-P--VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ-QELTSVPVHIIMTRMP 91 (159)
T ss_dssp TCBGGGSCBC-C--CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC-SCTTTCBGGGTSEETT
T ss_pred hCCHHHHcCC-C--EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc-CcccCcCHHHHHcCCC
Confidence 5689999986 2 3899999999999999999999999999889999999999999977542 22235789999987
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCC---cEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQN---ILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~---~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +...+||+|++| +++|+||+.||+++
T Consensus 92 ~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 92 NITVCRREDYVMDIAKHLIEK--QIDALPVIKDTDKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp SCCCBCTTSBHHHHHHHHHHH--TCSEEEEEEECSSSEEEEEEEEHHHHHHH
T ss_pred CcEEECCCCCHHHHHHHHHHc--CCcEEEEEeCCCcceeEEEEEEHHHHHHH
Confidence 888999999999999999999 899999999877 99999999999874
No 64
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.74 E-value=6.9e-18 Score=135.76 Aligned_cols=122 Identities=25% Similarity=0.422 Sum_probs=108.1
Q ss_pred hhhhhccccC----CCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcC
Q 019775 209 FKVQDVMKPQ----KELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCN 284 (336)
Q Consensus 209 ~~v~~im~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~ 284 (336)
.+|+++|.+. ..++++++++++.+|++.|.+++++.+||++ +|+++|+|+.+||+..+..........++.++|.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 85 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMT 85 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSB
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcC
Confidence 4699999965 3467999999999999999999999999965 8899999999999988765443334678999999
Q ss_pred CCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 285 RSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 285 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+++.++.+++++.++++.|.++ +.+.+||+| +|+++|+||+.||+++
T Consensus 86 ~~~~~v~~~~~l~~~~~~m~~~--~~~~lpVvd-~g~~~Giit~~dil~~ 132 (157)
T 4fry_A 86 AKVRYVEPSQSTDECMALMTEH--RMRHLPVLD-GGKLIGLISIGDLVKS 132 (157)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHH--TCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred CCCcEECCCCcHHHHHHHHHHc--CCCEEEEEE-CCEEEEEEEHHHHHHH
Confidence 9999999999999999999999 899999999 5999999999999874
No 65
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.74 E-value=1.2e-17 Score=132.08 Aligned_cols=122 Identities=20% Similarity=0.291 Sum_probs=102.6
Q ss_pred hhhhh---ccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 209 FKVQD---VMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 209 ~~v~~---im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
.++++ +|.+. ++++++++++.++++.|.+++++.+||+|++|+++|+++.+|+...+..........++.++|.+
T Consensus 8 ~~v~~~~~~~~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 85 (144)
T 2nyc_A 8 IPIGDLNIITQDN--MKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMR 85 (144)
T ss_dssp SBGGGSSCCBCSS--CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHH
T ss_pred cchhhcCCCCCCC--ceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhc
Confidence 45677 77665 56899999999999999999999999999889999999999999877642211224678888865
Q ss_pred ------CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 ------SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ------~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 86 ~~~~~~~~~~v~~~~~l~~~~~~m~~~--~~~~l~Vvd~~g~~~Giit~~dil~~ 138 (144)
T 2nyc_A 86 RSDDFEGVYTCTKNDKLSTIMDNIRKA--RVHRFFVVDDVGRLVGVLTLSDILKY 138 (144)
T ss_dssp CC------CEECTTSBHHHHHHHHHHH--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred CccccCCCeEECCCCcHHHHHHHHHHC--CCCEEEEECCCCCEEEEEEHHHHHHH
Confidence 578999999999999999999 89999999988999999999999874
No 66
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.74 E-value=1.6e-17 Score=133.68 Aligned_cols=121 Identities=16% Similarity=0.189 Sum_probs=106.2
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcce-EEEEcCCCcEEEEeeHHHHHHHHHhc--------------CC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGC-LLVIDEEYHLIGTFTDGDLRRTLKAS--------------GE 272 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-ipVvd~~~~~~G~it~~dl~~~~~~~--------------~~ 272 (336)
.++|+++|.+. ++++++++++.+|++.|.+++.+. +||+|++ +++|+|+.+||+..+... ..
T Consensus 15 ~~~v~~im~~~--~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 91 (157)
T 1o50_A 15 VKDVCKLISLK--PTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMK 91 (157)
T ss_dssp HHHHTTSSCCC--CEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCC
T ss_pred cccHhhcccCC--CceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHH
Confidence 45899999986 569999999999999999999999 9999977 999999999999875421 01
Q ss_pred chhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 273 GIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 273 ~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.....++.++|.+ +.++.+++++.++++.|.++ +...+||+|++|+++|+||+.||+++
T Consensus 92 ~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~~vGiit~~dll~~ 150 (157)
T 1o50_A 92 RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDN--NIQEMPVVDEKGEIVGDLNSLEILLA 150 (157)
T ss_dssp CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHC--CCcEEEEEcCCCEEEEEEEHHHHHHH
Confidence 1235689999999 99999999999999999999 89999999977999999999999864
No 67
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.73 E-value=9.5e-18 Score=134.86 Aligned_cols=123 Identities=20% Similarity=0.307 Sum_probs=106.0
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcC----CchhhhhHhhhc
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASG----EGIFKLTVGEMC 283 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~----~~~~~~~i~~~~ 283 (336)
.++|+++|.+...+++++++.++.++++.|.+++++.+||+|++|+++|+|+.+|+...+.... ......++.++|
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m 89 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVM 89 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTC
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHh
Confidence 4689999997223668999999999999999999999999998899999999999998764311 112356899999
Q ss_pred CCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 284 NRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 284 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.+++.++.+++++.++++.|.++ +. +||+|++|+++|+||+.||++.
T Consensus 90 ~~~~~~v~~~~~l~~a~~~m~~~--~~--l~Vvd~~g~~~Giit~~dil~~ 136 (157)
T 2emq_A 90 NRNIPRLRLDDSLMKAVGLIVNH--PF--VCVENDDGYFAGIFTRREVLKQ 136 (157)
T ss_dssp BCCCCEEETTSBHHHHHHHHHHS--SE--EEEECSSSSEEEEEEHHHHHHH
T ss_pred CCCCceecCCCcHHHHHHHHhhC--CE--EEEEcCCCeEEEEEEHHHHHHH
Confidence 99999999999999999999988 66 9999988999999999999864
No 68
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.73 E-value=2.2e-17 Score=132.07 Aligned_cols=122 Identities=12% Similarity=0.180 Sum_probs=105.3
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcC--
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCN-- 284 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~-- 284 (336)
..++|+++ ++ ++++++++++.++++.|.+++.+.+||+|++|+++|+|+.+||...+..........++.++|.
T Consensus 21 ~~~~v~~~--~~--~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 96 (152)
T 2uv4_A 21 EELQIGTY--AN--IAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHR 96 (152)
T ss_dssp HHHTCSBC--SS--CCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTC
T ss_pred HHccCCcc--CC--ceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhh
Confidence 35677887 33 5689999999999999999999999999988999999999999987765322223567888886
Q ss_pred ----CCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 285 ----RSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 285 ----~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||..||+++
T Consensus 97 ~~~~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 97 SHYFEGVLKCYLHETLETIINRLVEA--EVHRLVVVDENDVVKGIVSLSDILQA 148 (152)
T ss_dssp CHHHHTCSEECTTSBHHHHHHHHHHH--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred hcccCCCeEECCCCcHHHHHHHHHHc--CCeEEEEECCCCeEEEEEEHHHHHHH
Confidence 6788999999999999999999 89999999988999999999999874
No 69
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=99.73 E-value=2.6e-17 Score=150.94 Aligned_cols=162 Identities=20% Similarity=0.177 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCC--hhHHHHHHH-HHHcCC-CeEEEEeccchHHHHHHHHHHHHh-cCCe---eeecCC
Q 019775 17 ENTLLDLFKSQQDHLNYFFQHLS--LPHTLTFTQ-TLLKCR-GTIFFTGVGKSGFVANKISQTLIS-LGIK---SGFLNP 88 (336)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~--~~~i~~~~~-~i~~a~-~~I~i~G~G~s~~~a~~~~~~l~~-~g~~---~~~~~~ 88 (336)
...+.+-+.++.+.++++++... ...+..+.. .+.+.+ ++|+++|+|+|+.+|..++++|.+ .|.+ +..++.
T Consensus 15 ~~~m~kEI~eQP~~~~~tl~~~~~~~~~~~~~~~~~~~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~g~~~~~v~a~~~ 94 (389)
T 3i0z_A 15 AEITTREIYQQPDVWREAFEFYQAKREEIAAFLQEIADKHDYIKVILTGAGTSAYVGDTLLPYFKEVYDERKWNFNAIAT 94 (389)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEECSTHHHHHHHHHHHHHHHHSCTTTEEEEECCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHhcCCCCeEEEEEechHHHHHHHHHHHHHHHhCCCCceEEeccc
Confidence 34566667777888888877643 134555543 345542 499999999999999999999998 4888 665543
Q ss_pred ccccccc--cCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEEEEeCCCCCccccccCE-----EEEcCC-Cccc
Q 019775 89 LDALHGD--IGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLVSVTSVEGNALAAVCDM-----NVHLPV-EREL 158 (336)
Q Consensus 89 ~~~~~~~--~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi~IT~~~~s~l~~~ad~-----~i~~~~-~~~~ 158 (336)
.+..... ....+++|++|+||+||+|++++++++.||++ |+++|+||++.+|++++.||+ .+.++. +.+
T Consensus 95 ~~~~ase~~~~~~~~~dl~i~iS~SG~T~e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~~~~~~~i~~~~~~~E- 173 (389)
T 3i0z_A 95 TDIVANPATYLKKDVATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAADGKLALQAHGDDRNLLLLQPAVSND- 173 (389)
T ss_dssp HHHTTCHHHHCCTTSEEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSSCTTEEEEECCGGGSC-
T ss_pred cccccChHHhcCCCCCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHccccccceEEeccccccc-
Confidence 3321111 11237999999999999999999999999999 999999999999999999998 788774 333
Q ss_pred CCCCCCChhHHHHHHHHHHHHHH
Q 019775 159 CPFDLAPVTSTAIQMVFGDTVAI 181 (336)
Q Consensus 159 ~~~~~~~~~s~~~~~~l~d~l~~ 181 (336)
.....+.|.+++++.+.+|+.
T Consensus 174 --~~va~Tks~t~ql~~l~ll~~ 194 (389)
T 3i0z_A 174 --AGFAMTSSFTSMMLTTLLVFD 194 (389)
T ss_dssp --CSSSCSHHHHHHHHHHHHHHC
T ss_pred --ccccccHHHHHHHHHHHHHHH
Confidence 455778899999987777653
No 70
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.72 E-value=1.9e-17 Score=139.19 Aligned_cols=115 Identities=18% Similarity=0.213 Sum_probs=104.1
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhc---CcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSK---GCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
.+|+++|.+. +++++++.|+.++++.|.+. +...+||+|++|+++|+|+.+||+.. . ...++.++|.+
T Consensus 54 ~~v~~iM~~~--~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----~---~~~~v~~im~~ 124 (205)
T 3kxr_A 54 NEIGRYTDHQ--MLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH----E---PHEPLISLLSE 124 (205)
T ss_dssp TCGGGGCBCC--CCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----C---TTSBGGGGCCS
T ss_pred chHHhhccCc--eEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----C---CcchHHHHhcC
Confidence 4789999997 56999999999999999987 78999999999999999999998742 1 25689999999
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 125 ~~~~v~~~~~l~~a~~~m~~~--~~~~lpVVD~~g~lvGiIT~~Dil~~ 171 (205)
T 3kxr_A 125 DSRALTANTTLLDAAEAIEHS--REIELPVIDDAGELIGRVTLRAATAL 171 (205)
T ss_dssp SCCCEETTSCHHHHHHHHHTS--SCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHhc--CCCEEEEEcCCCeEEEEEEHHHHHHH
Confidence 999999999999999999999 99999999998999999999999863
No 71
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.70 E-value=6.7e-17 Score=130.71 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=104.2
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcC--CCcEEEEeeHHHHHHHHHhcCCc---hhhhhHhhh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDE--EYHLIGTFTDGDLRRTLKASGEG---IFKLTVGEM 282 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~--~~~~~G~it~~dl~~~~~~~~~~---~~~~~i~~~ 282 (336)
.++|+++|.+. ++++++++++.++++.|.+++++.+||+|+ +|+++|+|+..||...+...... ....++.++
T Consensus 12 ~~~v~dim~~~--~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~ 89 (164)
T 2pfi_A 12 HVRVEHFMNHS--ITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDI 89 (164)
T ss_dssp SCBHHHHCBCC--CCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHH
T ss_pred CCCHHHHcCCC--CeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhh
Confidence 46899999986 568999999999999999999999999996 78999999999999877542211 013568888
Q ss_pred cCCC------CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 283 CNRS------PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 283 ~~~~------~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|.++ +.++.+++++.++++.|.++ +.+.+||+| +|+++|+||+.||+++
T Consensus 90 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~--~~~~lpVvd-~g~l~Giit~~dil~~ 144 (164)
T 2pfi_A 90 LARGCPTEPVTLTLFSETTLHQAQNLFKLL--NLQSLFVTS-RGRAVGCVSWVEMKKA 144 (164)
T ss_dssp HHTTCCCBCCCCCEETTCBHHHHHHHHHHT--TCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred hcccccccCCceEECCCCcHHHHHHHHHHh--CCCEEEEEE-CCEEEEEEEHHHHHHH
Confidence 8776 78899999999999999999 899999999 5999999999999864
No 72
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.70 E-value=6.4e-17 Score=133.56 Aligned_cols=124 Identities=18% Similarity=0.187 Sum_probs=107.2
Q ss_pred hhhhhhccccCCC--Cccc--cCCCcHHHHHHHHHhcCcceEEEE--cCCCcEEEEeeHHHHHHHHHhcC----------
Q 019775 208 IFKVQDVMKPQKE--LPVC--KEGDLIMDQLVELTSKGCGCLLVI--DEEYHLIGTFTDGDLRRTLKASG---------- 271 (336)
Q Consensus 208 ~~~v~~im~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~ipVv--d~~~~~~G~it~~dl~~~~~~~~---------- 271 (336)
.++|+++|.+... ++++ .++.++.+|++.|.+++++.+||+ |++|+++|+|+..||+..+....
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~ 89 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTS 89 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTC
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccc
Confidence 4589999998732 4577 999999999999999999999999 77899999999999998775421
Q ss_pred -------------CchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 272 -------------EGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 272 -------------~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
......++.++|.+++.++.+++++.++++.|.++ +.+.+||++ +|+++|+||+.||+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~--~~~~l~Vvd-~g~~vGiit~~dll~~ 162 (185)
T 2j9l_A 90 IIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKL--GLRQCLVTH-NGRLLGIITKKDVLKH 162 (185)
T ss_dssp EEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHH--TCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred eeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhC--CCcEEEEEE-CCEEEEEEEHHHHHHH
Confidence 01124678999988999999999999999999999 899999999 6999999999999874
No 73
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.69 E-value=1.3e-16 Score=137.99 Aligned_cols=124 Identities=17% Similarity=0.237 Sum_probs=104.0
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCc-------------
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEG------------- 273 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~------------- 273 (336)
+..+|+++|.++ ++++++++++.+|+++|.+++++.+||+|++|+++|++|..|+...+......
T Consensus 5 ~~~~v~~im~~~--~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 5 VKLKVEDLEMDK--IAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp CCCBGGGSCCBC--CCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred ccCcHHHhcCCC--CcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 345899999987 45999999999999999999999999999889999999999999876432100
Q ss_pred --------------------------------------------------------------------------------
Q 019775 274 -------------------------------------------------------------------------------- 273 (336)
Q Consensus 274 -------------------------------------------------------------------------------- 273 (336)
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence
Q ss_pred -------------------hhhhhHhhhcC-CCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhh
Q 019775 274 -------------------IFKLTVGEMCN-RSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVS 333 (336)
Q Consensus 274 -------------------~~~~~i~~~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~ 333 (336)
....++.++|. +++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||++|+++
T Consensus 163 ~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~--~~~~~pVvd~~~~~~Giit~~dll~ 240 (245)
T 3l2b_A 163 NNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSET--RYSNYPVIDENNKVVGSIARFHLIS 240 (245)
T ss_dssp HTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHH--CCSEEEEECTTCBEEEEEECC----
T ss_pred cCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhc--CCceEEEEcCCCeEEEEEEHHHhhc
Confidence 01346889998 8899999999999999999999 9999999998899999999999987
Q ss_pred c
Q 019775 334 A 334 (336)
Q Consensus 334 ~ 334 (336)
+
T Consensus 241 ~ 241 (245)
T 3l2b_A 241 T 241 (245)
T ss_dssp -
T ss_pred h
Confidence 5
No 74
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=1.3e-16 Score=135.08 Aligned_cols=116 Identities=20% Similarity=0.239 Sum_probs=104.7
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
..+++++|.++ ++++.++.++.++.++|.+++.+.+||+|++++++|+||.+|+..... ..++.++|.+++
T Consensus 12 ~~~~~~~~~~~--~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~-------~~~v~~im~~~~ 82 (213)
T 1vr9_A 12 HMKVKKWVTQD--FPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL-------DSSVFNKVSLPD 82 (213)
T ss_dssp -CBGGGGCBSC--SCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT-------TSBSGGGCBCTT
T ss_pred ccCHHHhhcCC--CeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC-------CCcHHHHccCCC
Confidence 45788999987 459999999999999999999999999998899999999999886432 457999999999
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.+++++.++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 83 ~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~lvGiit~~Dil~~ 127 (213)
T 1vr9_A 83 FFVHEEDNITHALLLFLEH--QEPYLPVVDEEMRLKGAVSLHDFLEA 127 (213)
T ss_dssp CCEETTSBHHHHHHHHHHC--CCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHh--CCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 9999999999999999999 99999999988999999999999864
No 75
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.66 E-value=4.9e-16 Score=139.77 Aligned_cols=122 Identities=20% Similarity=0.288 Sum_probs=106.9
Q ss_pred hhhhhc---cccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 209 FKVQDV---MKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 209 ~~v~~i---m~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
.+++++ |.+. ++++++++++.++++.|.+++++.+||+|++|+++|+||.+|++..+..........++.++|.+
T Consensus 187 ~~v~~~~~~m~~~--~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~ 264 (323)
T 3t4n_C 187 IPIGDLNIITQDN--MKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMR 264 (323)
T ss_dssp SBGGGTTCSBCTT--CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGG
T ss_pred CcHHHcCCCCCCC--cEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhh
Confidence 367788 7665 56999999999999999999999999999889999999999999987642212235689999987
Q ss_pred ------CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 ------SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ------~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||..||+++
T Consensus 265 ~~~~~~~~~~v~~~~~l~~~~~~m~~~--~~~~l~Vvd~~~~l~Giit~~Dil~~ 317 (323)
T 3t4n_C 265 RSDDFEGVYTCTKNDKLSTIMDNIRKA--RVHRFFVVDDVGRLVGVLTLSDILKY 317 (323)
T ss_dssp SCTTCCCCEEECTTCBHHHHHHHHHHS--CCCEEEEECTTSBEEEEEEHHHHHHH
T ss_pred ccccCCCCEEECCCCCHHHHHHHHHHh--CCCEEEEECCCCcEEEEEEHHHHHHH
Confidence 788999999999999999999 99999999988999999999999874
No 76
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.64 E-value=4.2e-16 Score=134.36 Aligned_cols=123 Identities=15% Similarity=0.151 Sum_probs=102.4
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC--CcEEEEeeHHHHHHHHHhc----CC---c----
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE--YHLIGTFTDGDLRRTLKAS----GE---G---- 273 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~--~~~~G~it~~dl~~~~~~~----~~---~---- 273 (336)
..++|+++|.++ ++++.+++++.++.++|.+++++++||+|++ ++++|+|+++||+..+... .. .
T Consensus 11 ~~~~v~diMt~~--vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMVRD--VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSBSS--CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcCCC--CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 356899999987 6699999999999999999999999999964 6899999999999765421 00 0
Q ss_pred ----------------------h---------------------------------------------------------
Q 019775 274 ----------------------I--------------------------------------------------------- 274 (336)
Q Consensus 274 ----------------------~--------------------------------------------------------- 274 (336)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------hhhhH--h-hhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 275 ---------------FKLTV--G-EMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 275 ---------------~~~~i--~-~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
...++ . .+|++.|+.|.+++++.++..+|... +++++||++. |+++|+||++||+++
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~l--glr~l~V~~~-GrLVGIVTrkDl~ka 243 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLL--GLDRAYVTSM-GKLVGVVALAEIQAA 243 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHH--TCSEEEEEET-TEEEEEEEHHHHHHH
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHh--CCeEEEEEEC-CEEEEEEEHHHHHHH
Confidence 00111 1 25888999999999999999999999 9999999986 999999999999975
No 77
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.64 E-value=3.2e-16 Score=138.57 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=104.9
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhc-----CcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSK-----GCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEM 282 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~ 282 (336)
..+|+++|.+. +++++++.++.++++.|.++ +++.+||+|++|+++|+||.+|+.... ...++.++
T Consensus 136 ~~~v~~iM~~~--~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~-------~~~~v~~i 206 (286)
T 2oux_A 136 DETAGAIMTTE--FVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND-------DDTLIADI 206 (286)
T ss_dssp TTBHHHHCBSC--CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC-------TTSBHHHH
T ss_pred hHHHHHhCCCC--ceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC-------CCCcHHHH
Confidence 45889999986 56999999999999999987 788899999889999999999987531 25789999
Q ss_pred cCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 283 CNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 283 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|.+++.++.+++++.++++.|.++ +...+||+|++|+++|+||..||++.
T Consensus 207 m~~~~~~v~~~~~l~ea~~~m~~~--~~~~lpVVd~~g~lvGiIT~~Dil~~ 256 (286)
T 2oux_A 207 LNERVISVHVGDDQEDVAQTIRDY--DFLAVPVTDYDDHLLGIVTVDDIIDV 256 (286)
T ss_dssp SBSCCCCEETTSBHHHHHHHHHHH--TCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cCCCCeeecCCCCHHHHHHHHHHc--CCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 999999999999999999999999 89999999988999999999999863
No 78
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.64 E-value=1.1e-15 Score=135.72 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=107.4
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCC-----chhhhhHhhhcC
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGE-----GIFKLTVGEMCN 284 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~-----~~~~~~i~~~~~ 284 (336)
+++++|.+. ++++++++++.++++.|.+++++.+||+|++|+++|++|.+|++..+..... .....++.++|.
T Consensus 157 ~v~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~ 234 (296)
T 3ddj_A 157 PVKVFMSTK--VQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMV 234 (296)
T ss_dssp BHHHHSBCS--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSB
T ss_pred cHHHhhcCC--CeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhC
Confidence 788999876 5589999999999999999999999999989999999999999987753110 112468999999
Q ss_pred CCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 285 RSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 285 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 235 ~~~~~v~~~~~l~~a~~~m~~~--~~~~l~Vvd~~g~~~Giit~~Dil~~ 282 (296)
T 3ddj_A 235 TNLVTIDELASVNRAAAEMIVK--RIGSLLILNKDNTIRGIITERDLLIA 282 (296)
T ss_dssp CCCCBCCTTSBHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCCeEECCCCcHHHHHHHHHHc--CCCEEEEECCCCeEEEEEcHHHHHHH
Confidence 9999999999999999999999 89999999988999999999999874
No 79
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.63 E-value=9.9e-16 Score=134.93 Aligned_cols=115 Identities=23% Similarity=0.300 Sum_probs=103.7
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhc-----CcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhc
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSK-----GCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMC 283 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~ 283 (336)
.+++++|.+. ++++.++.++.++++.|.++ ++..+||+|++|+++|+||.+|++.. . ...++.++|
T Consensus 135 ~~v~~iM~~~--~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----~---~~~~v~~im 205 (278)
T 2yvy_A 135 DEAGGLMTPE--YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----D---PRTRVAEIM 205 (278)
T ss_dssp TBGGGTCBSC--CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS----C---TTCBSTTTS
T ss_pred chHHhhcCCC--ceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC----C---CCCcHHHHh
Confidence 3678999986 66999999999999999987 68999999988999999999999853 1 256899999
Q ss_pred CCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 284 NRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 284 ~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.+++.++++++++.++++.|.++ +...+||+|++|+++|+||..||++.
T Consensus 206 ~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~g~lvGivT~~Dil~~ 254 (278)
T 2yvy_A 206 NPKVVYVRTDTDQEEVARLMADY--DFTVLPVVDEEGRLVGIVTVDDVLDV 254 (278)
T ss_dssp BSSCCCEETTSBHHHHHHHHHHH--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred CCCCeEEeCCCCHHHHHHHHHhc--CCCEEEEEeCCCeEEEEEEHHHHHHH
Confidence 88999999999999999999999 89999999988999999999999864
No 80
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.63 E-value=2.2e-16 Score=154.02 Aligned_cols=125 Identities=15% Similarity=0.102 Sum_probs=105.3
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHH-hcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCc------------
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELT-SKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEG------------ 273 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~------------ 273 (336)
..++|+|+|.|..++++++++++++|+.+.|. +++++.+||+|++++++|+|+++||+..+......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 46799999996555779999999999999999 79999999999889999999999999765432100
Q ss_pred ----------------------------------hhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCC
Q 019775 274 ----------------------------------IFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQ 319 (336)
Q Consensus 274 ----------------------------------~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~ 319 (336)
....++.++|.++|.++++++++.++++.|.++ +.+.+||+ ++
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~--~i~~lpVv-e~ 607 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVML--MPSMIYVT-ER 607 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHT--CCSEEEEE-ET
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhc--CCCEEEEE-EC
Confidence 000137789999999999999999999999999 99999999 66
Q ss_pred CcEEEEEehhhHhhc
Q 019775 320 NILIGIVTLHGLVSA 334 (336)
Q Consensus 320 ~~~iGiit~~di~~~ 334 (336)
|+++|+||++||+++
T Consensus 608 G~lvGIVT~~Dll~~ 622 (632)
T 3org_A 608 GKLVGIVEREDVAYG 622 (632)
T ss_dssp TEEEEEEEGGGTEEC
T ss_pred CEEEEEEehhhHHHH
Confidence 999999999999875
No 81
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.61 E-value=6.3e-15 Score=133.14 Aligned_cols=121 Identities=16% Similarity=0.208 Sum_probs=105.6
Q ss_pred hhhh---ccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC-
Q 019775 210 KVQD---VMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR- 285 (336)
Q Consensus 210 ~v~~---im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~- 285 (336)
++++ +|.+. +++++++.++.++++.|.+++++.+||+|++|+++|+||.+|++..+..........++.++|.+
T Consensus 183 ~v~~l~~~m~~~--~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~ 260 (334)
T 2qrd_G 183 PLNQMTIGTWSN--LATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKR 260 (334)
T ss_dssp BGGGSSCSBCSS--CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTC
T ss_pred cHHHhCCcccCC--ceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcc
Confidence 5677 47765 55899999999999999999999999999889999999999999887653222335789999984
Q ss_pred -----CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 -----SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 -----~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 261 ~~~~~~~~~v~~~~~l~~~~~~m~~~--~~~~l~Vvd~~g~l~Giit~~dil~~ 312 (334)
T 2qrd_G 261 PANFDGVHTCRATDRLDGIFDAIKHS--RVHRLFVVDENLKLEGILSLADILNY 312 (334)
T ss_dssp CTTCCCCCEECTTCBHHHHHHHHHHS--CCCEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cccCCCCEEECCCCcHHHHHHHHHHc--CCCEEEEECCCCeEEEEEeHHHHHHH
Confidence 788999999999999999999 99999999988999999999999864
No 82
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.61 E-value=3.7e-15 Score=130.96 Aligned_cols=120 Identities=20% Similarity=0.272 Sum_probs=105.5
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcC----------CchhhhhH
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASG----------EGIFKLTV 279 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~----------~~~~~~~i 279 (336)
+++++|.+. +++++++.++.++++.|.+++++.+||+ ++|+++|+||.+|++..+.... ......++
T Consensus 149 ~v~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v 225 (280)
T 3kh5_A 149 VIDDYITRD--VIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRM 225 (280)
T ss_dssp BSGGGCBCS--CCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBH
T ss_pred CHHHHhCCC--CeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcH
Confidence 678899876 4589999999999999999999999999 5889999999999998774211 01135679
Q ss_pred hhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 280 GEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 280 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++|.+++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 226 ~~~m~~~~~~v~~~~~l~~a~~~m~~~--~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 226 EEIMKRDVITAKEGDKLKKIAEIMVTN--DIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp HHHSBSSCCCBCTTCBHHHHHHHHHHH--TCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred HHHhcCCCEEECCCCCHHHHHHHHHHC--CCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 999999999999999999999999999 99999999998899999999999975
No 83
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.60 E-value=2e-15 Score=132.96 Aligned_cols=123 Identities=24% Similarity=0.306 Sum_probs=103.8
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHH------HHHH------hc-----
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLR------RTLK------AS----- 270 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~------~~~~------~~----- 270 (336)
..+++++|.+. +++++++.++.++.+.|.+++.+.+||+|++|+++|+++..|++ ..+. ..
T Consensus 125 ~~~v~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 202 (282)
T 2yzq_A 125 GVEIEPYYQRY--VSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWI 202 (282)
T ss_dssp GCBSTTTSBSC--CCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC----------------
T ss_pred cCcHHHHhCCC--CEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhh
Confidence 34678899766 45899999999999999999999999999889999999999998 4332 00
Q ss_pred ------------CCchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 271 ------------GEGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 271 ------------~~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.......++.++|.+++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~--~~~~lpVvd~~~~lvGiit~~Dil~~ 276 (282)
T 2yzq_A 203 LESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKY--SIEQLPVIRGEGDLIGLIRDFDLLKV 276 (282)
T ss_dssp ----------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHH--TCSEEEEEETTTEEEEEEEHHHHGGG
T ss_pred cccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHc--CcceeEEECCCCCEEEEEeHHHHHHH
Confidence 001124678999999999999999999999999999 99999999987899999999999875
No 84
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.60 E-value=8.3e-15 Score=128.73 Aligned_cols=125 Identities=19% Similarity=0.276 Sum_probs=109.1
Q ss_pred hhhhhhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhh
Q 019775 203 IGKSLIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEM 282 (336)
Q Consensus 203 ~~~~~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~ 282 (336)
+......+++++|.++ +++++++.++.++++.|.+++++.+||+|++|+++|++|.+|+...+..... ...++.++
T Consensus 78 ~~~~~~~~v~~im~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~--~~~~v~~~ 153 (280)
T 3kh5_A 78 FLAAINEPVREIMEEN--VITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID--ENEVIDDY 153 (280)
T ss_dssp HHHHTTSBGGGTSBCS--CCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSC--TTCBSGGG
T ss_pred hhHHhhhhHHHhcCCC--CEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCC--CCCCHHHH
Confidence 3333356899999986 5699999999999999999999999999989999999999999988765332 23478999
Q ss_pred cCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 283 CNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 283 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|.+++.++.+++++.++++.|.++ +...+||+ ++|+++|+||..|+++.
T Consensus 154 m~~~~~~v~~~~~l~~~~~~~~~~--~~~~~~Vv-~~~~~~Givt~~dl~~~ 202 (280)
T 3kh5_A 154 ITRDVIVATPGERLKDVARTMVRN--GFRRLPVV-SEGRLVGIITSTDFIKL 202 (280)
T ss_dssp CBCSCCCBCTTCBHHHHHHHHHHH--TCSEEEEE-ETTEEEEEEEHHHHHHH
T ss_pred hCCCCeEECCCCcHHHHHHHHHHc--CCCEEEEE-ECCEEEEEEEHHHHHHH
Confidence 999999999999999999999999 89999999 55999999999999864
No 85
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.60 E-value=1.5e-15 Score=134.83 Aligned_cols=135 Identities=18% Similarity=0.218 Sum_probs=111.1
Q ss_pred HHhhcCCCCchhhhhhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCC
Q 019775 193 EYAANHPAGRIGKSLIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGE 272 (336)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~ 272 (336)
+....||.+.-..+...+|+++|.++ +++++++.++.+|++.|.+++++.+||+| |+++|++|.+||+..+.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~V~dim~~~--~~~v~~~~~v~~a~~~m~~~~~~~~~V~d--~~l~GivT~~Di~~~~~~~~~ 79 (296)
T 3ddj_A 4 DKIHHHHHHENLYFQGMNIETLMIKN--PPILSKEDRLGSAFKKINEGGIGRIIVAN--EKIEGLLTTRDLLSTVESYCK 79 (296)
T ss_dssp ----------CCTTCCSSGGGTCEES--CCEECTTSBHHHHHHHTTGGGCCEEEEES--SSEEEEEEHHHHHGGGTTCC-
T ss_pred cccccchhhhhhhhcccCHHHhccCC--CcEECCCccHHHHHHHHHHCCCceEEEEC--CeEEEEEeHHHHHHHhccccc
Confidence 34566788888888888999999986 56999999999999999999999999998 899999999999987642110
Q ss_pred ---------chhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhh
Q 019775 273 ---------GIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVS 333 (336)
Q Consensus 273 ---------~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~ 333 (336)
.....++.++|.+++.++.+++++.++++.|.++ +...+||+|++|+++|++|..|+++
T Consensus 80 ~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~--~~~~lpVvd~~~~lvGivt~~dl~~ 147 (296)
T 3ddj_A 80 DSCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTR--NFGSLPVVDINDKPVGIVTEREFLL 147 (296)
T ss_dssp --CCHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHGG
T ss_pred ccccchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHc--CCCEEEEEcCCCcEEEEEeHHHHHH
Confidence 1124678999999999999999999999999999 8999999998899999999999986
No 86
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=99.58 E-value=3.6e-14 Score=113.79 Aligned_cols=157 Identities=10% Similarity=0.067 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHhcCChhHHHHHHHHHHcC---CCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccC
Q 019775 21 LDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLKC---RGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIG 97 (336)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~a---~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 97 (336)
.+++..++..+-+..+.... .|+++++++.+| +++||+||+|.|..++.++.++-.++-....... ..
T Consensus 3 ~kI~~tql~~ll~~i~~~e~-~I~~AA~llaqai~~~g~IyvfG~Ghs~~~~~e~~~~~e~l~~~~~~~~--------~~ 73 (170)
T 3jx9_A 3 LKILATQFNGKLQTLTKQED-ELFDVVRLLAQALVGQGKVYLDAYGEFEGLYPMLSDGPDQMKRVTKIKD--------HK 73 (170)
T ss_dssp HHHHHHHHHHHHHHHGGGHH-HHHHHHHHHHHHHHTTCCEEEEECGGGGGGTHHHHTSTTCCTTEEECCT--------TC
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCEEEEECCCcHHHHHHHHHcccCCccchhhhhh--------cC
Confidence 34556666666555555555 899999998766 2499999999999999988776544422221111 23
Q ss_pred CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeC-CCCCcc-ccccCEEEEcCCCcccC-CCCCCChhHHHHHHH
Q 019775 98 ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTS-VEGNAL-AAVCDMNVHLPVERELC-PFDLAPVTSTAIQMV 174 (336)
Q Consensus 98 ~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~-~~~s~l-~~~ad~~i~~~~~~~~~-~~~~~~~~s~~~~~~ 174 (336)
.++++|++|++|.||.++..+++++.+|++|+++|+||+ ...... .+++|++..+|.+--.. ........|.++..|
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs~~~~~~~~~~L~d~an~~p~gll~~e~g~r~g~~Sti~~~~ 153 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAPLALKFDKGLLPAEDGSRHGLPSLALGAF 153 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEESSCCCTTGGGSSSCEECCCCSCSEECTTSCEECCCHHHHHHH
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeCcchhccccCcHHHHHhCCCCCceECCCCCEechhHHHHHHH
Confidence 788999999999999999999999999999999999999 333332 46778773333331100 111233567778888
Q ss_pred HHHHHHHHHHhh
Q 019775 175 FGDTVAIAMMGA 186 (336)
Q Consensus 175 l~d~l~~~~~~~ 186 (336)
+.+.|+..+.+.
T Consensus 154 i~~~i~~~~~e~ 165 (170)
T 3jx9_A 154 LLTHILTQLQEM 165 (170)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888877654
No 87
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=99.58 E-value=1.8e-14 Score=128.20 Aligned_cols=114 Identities=23% Similarity=0.233 Sum_probs=90.4
Q ss_pred cCCCeEEEEeccchHHHHHHHHHHHHh-c-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCC
Q 019775 52 KCRGTIFFTGVGKSGFVANKISQTLIS-L-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGA 129 (336)
Q Consensus 52 ~a~~~I~i~G~G~s~~~a~~~~~~l~~-~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~ 129 (336)
++ ++|+++|+|+|+.+|.++++.|.. . |+++....+... .+++|++|+||+||+|++++++++.||++|+
T Consensus 36 ~~-~~I~i~G~G~S~~~a~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~dlvI~iS~SG~T~e~~~a~~~ak~~g~ 107 (302)
T 1tzb_A 36 AM-PRLYISGMGGSGVVADLIRDFSLTWNWEVEVIAVKDYFL-------KARDGLLIAVSYSGNTIETLYTVEYAKRRRI 107 (302)
T ss_dssp CC-SEEEEECCHHHHHHHHHHHHHHHHTTCSSEEEEECSSCC-------CCSSSEEEEECSSSCCHHHHHHHHHHHHTTC
T ss_pred CC-CEEEEEEecHHHHHHHHHHHHHHhhcCCceEEEeCCcCC-------CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCC
Confidence 46 699999999999999999999975 6 888888876644 2799999999999999999999999999999
Q ss_pred eEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 019775 130 YLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIA 182 (336)
Q Consensus 130 ~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~ 182 (336)
++|+||++. +++++ |+.+....+ . .....|.++++..+-.|+..
T Consensus 108 ~~iaIT~~~--~La~~-~~~l~~~~e-~-----~a~~~s~~~~l~~~~~l~~~ 151 (302)
T 1tzb_A 108 PAVAITTGG--RLAQM-GVPTVIVPK-A-----SAPRAALPQLLTAALHVVAK 151 (302)
T ss_dssp CEEEEESST--TGGGS-SSCEEECCC-C-----SSGGGGHHHHHHHHHHHHHH
T ss_pred eEEEECCCc--hHHHC-CeeEEeCCC-C-----CccHHHHHHHHHHHHHHHHH
Confidence 999999987 99999 888743221 1 13333666666544444333
No 88
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.58 E-value=6.7e-15 Score=140.90 Aligned_cols=120 Identities=11% Similarity=0.146 Sum_probs=105.4
Q ss_pred hhhhhhccccCCCCccccCC-CcHHHHHHHHHhcCcceEEEEc-CCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 208 IFKVQDVMKPQKELPVCKEG-DLIMDQLVELTSKGCGCLLVID-EEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~ipVvd-~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
..+|+++|.+. ++++.++ +++.+++++|.+++++.+||+| ++++++|+||.+||+..+.... .....++.++|.+
T Consensus 383 ~~~V~diM~~~--~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~-~~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELELPA--PPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN-RQQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCCCC--CSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC-CCTTSBGGGGEET
T ss_pred CCcHHHhCcCC--CeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc-CcCCCcHHHHhcC
Confidence 46899999976 5689999 9999999999999999999999 7899999999999998876532 1235789999999
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCC----CcEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQ----NILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~----~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ + .+||+|++ |+++|+||+.||+++
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~--~--~~pVVd~~~~~~g~lvGIVT~~Dll~~ 508 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVD--P--SVLILGKNPAGKVELKALATKLDVTTF 508 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTC--S--EEEEEEECSSSCEEEEEEEEHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHhhC--C--EEEEEeCCcccCCeEEEEEEHHHHHHH
Confidence 999999999999999999776 4 47999984 899999999999874
No 89
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.54 E-value=9.3e-15 Score=137.73 Aligned_cols=116 Identities=23% Similarity=0.289 Sum_probs=103.9
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhc-----CcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSK-----GCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEM 282 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~ 282 (336)
..+++++|.++ +++++++.+++++++.++++ +++.+||+|++++++|+++.+|++.. . ...++.++
T Consensus 154 ~~~v~~iM~~~--~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~----~---~~~~v~di 224 (473)
T 2zy9_A 154 EDEAGGLMTPE--YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----D---PRTRVAEI 224 (473)
T ss_dssp TTBSTTTCBSC--EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS----C---TTSBGGGT
T ss_pred CCCHHHhCCCC--ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC----C---CCCcHHHH
Confidence 34678999986 67999999999999999986 47899999988999999999999863 1 25789999
Q ss_pred cCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 283 CNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 283 ~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
|.+++.+++++++++++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 225 m~~~~~~v~~~~~l~ea~~~m~~~--~~~~lpVVDe~g~lvGiIT~~Dil~~ 274 (473)
T 2zy9_A 225 MNPKVVYVRTDTDQEEVARLMADY--DFTVLPVVDEEGRLVGIVTVDDVLDV 274 (473)
T ss_dssp SBSSCCCEESSSBHHHHHHHHHHH--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred hCCCCeEEeCCCcHHHHHHHHHhc--CCcEEEEEcCCCEEEEEEehHhhHHH
Confidence 998999999999999999999999 99999999999999999999999863
No 90
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.53 E-value=2.7e-14 Score=135.40 Aligned_cols=129 Identities=14% Similarity=0.213 Sum_probs=108.8
Q ss_pred hcCCCCchhhhh-----hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcC--CCcEEEEeeHHHHHHHHH
Q 019775 196 ANHPAGRIGKSL-----IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDE--EYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 196 ~~~~~~~~~~~~-----~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~--~~~~~G~it~~dl~~~~~ 268 (336)
-.|++.+++... .+..+++|.++ ++++++++|+.++.++|.+++++.+||+|+ +++++|+||.+||+.
T Consensus 95 vIh~~~~~~~q~~~V~~V~~~~~~m~~d--~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~--- 169 (511)
T 3usb_A 95 IIHKNMSIEQQAEQVDKVKRSESGVISD--PFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF--- 169 (511)
T ss_dssp EECSSSCHHHHHHHHHHHHTSSSCSSSS--CCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT---
T ss_pred eecccCCHHHHHHHHHHhhccccccccC--CEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh---
Confidence 346666655543 33445556655 458999999999999999999999999998 889999999999964
Q ss_pred hcCCchhhhhHhhhcCC-CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 269 ASGEGIFKLTVGEMCNR-SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 269 ~~~~~~~~~~i~~~~~~-~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
. .....++.++|.+ ++.++++++++.++++.|.++ +.+.+||+|++|+++|+||..|+++.
T Consensus 170 ~---~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~--~i~~lpVVDe~g~l~GiIT~~Dil~~ 231 (511)
T 3usb_A 170 I---QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKY--KIEKLPLVDNNGVLQGLITIKDIEKV 231 (511)
T ss_dssp C---CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHH--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred h---ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHc--CCCEEEEEeCCCCEeeeccHHHHHHh
Confidence 1 1135789999998 889999999999999999999 99999999999999999999999874
No 91
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=4.4e-14 Score=124.34 Aligned_cols=119 Identities=21% Similarity=0.268 Sum_probs=102.5
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHH-HHHhcCCchhhhhHhhhcCCCC
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRR-TLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~-~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
.+++++|.+. +++++++.++.++++.|.+++.+.+||+|++|+++|++|.+|+.. .+... ......++.++|.+++
T Consensus 60 ~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~-~~~~~~~v~~~m~~~~ 136 (282)
T 2yzq_A 60 EQLAMLVKRD--VPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKS-EKYKGVEIEPYYQRYV 136 (282)
T ss_dssp ----CCCBSC--CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTC-SGGGGCBSTTTSBSCC
T ss_pred CCHHHHcCCC--CcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhcc-CCcccCcHHHHhCCCC
Confidence 4688999886 458999999999999999999999999998899999999999998 55432 2223567889998889
Q ss_pred eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHh
Q 019775 288 RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLV 332 (336)
Q Consensus 288 ~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~ 332 (336)
..+.+++++.++++.|.++ +.+.+||+|++|+++|+||..|++
T Consensus 137 ~~v~~~~~l~~~~~~~~~~--~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 137 SIVWEGTPLKAALKALLLS--NSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp CCEETTSBHHHHHHHHHTC--SSSEEEEECTTSCEEEEEEGGGGG
T ss_pred EEECCCCCHHHHHHHHHHc--CCcEEEEEcCCCeEEEEEEHHHHh
Confidence 9999999999999999999 899999999889999999999998
No 92
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.51 E-value=5.8e-14 Score=126.56 Aligned_cols=121 Identities=12% Similarity=0.189 Sum_probs=102.6
Q ss_pred hhhhc--cc-cCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhc---
Q 019775 210 KVQDV--MK-PQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMC--- 283 (336)
Q Consensus 210 ~v~~i--m~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~--- 283 (336)
+++++ |. +. +++++++.++.++++.|.+++.+.+||+|++|+++|+||.+|++..+..........++.++|
T Consensus 191 ~v~~~~v~~~~~--~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~ 268 (330)
T 2v8q_E 191 SLEELQIGTYAN--IAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHR 268 (330)
T ss_dssp BHHHHTCSBCSS--CCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGC
T ss_pred CHHHhcccCcCC--ceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhcc
Confidence 45555 43 33 568999999999999999999999999998899999999999998765432222246788887
Q ss_pred ---CCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 284 ---NRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 284 ---~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.+++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||..||+++
T Consensus 269 ~~~~~~~~~v~~~~~l~~a~~~m~~~--~~~~l~Vvd~~g~l~Giit~~Dil~~ 320 (330)
T 2v8q_E 269 SHYFEGVLKCYLHETLEAIINRLVEA--EVHRLVVVDEHDVVKGIVSLSDILQA 320 (330)
T ss_dssp CSCCCSCCEECTTSBHHHHHHHHHHH--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred ccccCCCeEECCCCcHHHHHHHHHHC--CCcEEEEEcCCCcEEEEEeHHHHHHH
Confidence 47888999999999999999999 99999999988999999999999874
No 93
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.50 E-value=3.5e-14 Score=128.03 Aligned_cols=125 Identities=16% Similarity=0.202 Sum_probs=104.6
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhcC-------Cch-----
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKASG-------EGI----- 274 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~~-------~~~----- 274 (336)
..+|+++|.|...+++++++.++.++++.|.+++++.+||++++ ++++|+++.+|++..+.... ...
T Consensus 34 ~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~ 113 (330)
T 2v8q_E 34 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKI 113 (330)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBH
T ss_pred cCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccH
Confidence 45899999665557899999999999999999999999999977 78999999999998664311 000
Q ss_pred --hhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeC-CCcEEEEEehhhHhhc
Q 019775 275 --FKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINR-QNILIGIVTLHGLVSA 334 (336)
Q Consensus 275 --~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~-~~~~iGiit~~di~~~ 334 (336)
....+.++|.+++.++.+++++.++++.|.++ +.+.+||+|+ +|+++|+||..|++++
T Consensus 114 ~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~--~~~~~~Vvd~~~~~~~Givt~~dl~~~ 174 (330)
T 2v8q_E 114 ETWREVYLQDSFKPLVCISPNASLFDAVSSLIRN--KIHRLPVIDPESGNTLYILTHKRILKF 174 (330)
T ss_dssp HHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHH--TCSCEEEECTTTCCEEEEECHHHHHHH
T ss_pred HHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHC--CCCeEEEEeCCCCcEEEEEcHHHHHHH
Confidence 01234567788899999999999999999998 8999999997 7999999999999863
No 94
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.50 E-value=1.1e-13 Score=124.45 Aligned_cols=123 Identities=11% Similarity=0.246 Sum_probs=102.4
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCc-----EEEEeeHHHHHHHHHhcCC--chhhhhHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYH-----LIGTFTDGDLRRTLKASGE--GIFKLTVG 280 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~-----~~G~it~~dl~~~~~~~~~--~~~~~~i~ 280 (336)
.+.+.++|.+. +++++++.++.++++.|.+++++.+||+|+++. ++|++|.+|++..+..... .....++.
T Consensus 113 i~~~~~~~~~~--~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~ 190 (323)
T 3t4n_C 113 IERALGVDQLD--TASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIG 190 (323)
T ss_dssp HHHHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGG
T ss_pred HHHHhCCCCCC--ceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHH
Confidence 34556667665 568999999999999999999999999997775 9999999999988764321 11235788
Q ss_pred hh---cCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 281 EM---CNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 281 ~~---~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++ |.+++.++.+++++.++++.|.++ +...+||+|++|+++|+||..|++++
T Consensus 191 ~~~~~m~~~~~~v~~~~~~~~~~~~m~~~--~~~~~pVvd~~~~~~Giit~~dl~~~ 245 (323)
T 3t4n_C 191 DLNIITQDNMKSCQMTTPVIDVIQMLTQG--RVSSVPIIDENGYLINVYEAYDVLGL 245 (323)
T ss_dssp GTTCSBCTTCCCBCTTSBHHHHHHHHHHH--TCSEEEEECTTCBEEEEEETTHHHHH
T ss_pred HcCCCCCCCcEEECCCCcHHHHHHHHHHc--CCCEEEEECCCCeEEEEEeHHHHHHH
Confidence 88 888899999999999999999998 89999999988999999999999863
No 95
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.48 E-value=2e-14 Score=135.78 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=90.3
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcC-C-C
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCN-R-S 286 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~-~-~ 286 (336)
..++++|.++ ++++++++++.++.++|.+++++.+||+|++++++|+||.+||+.. .....++.++|. + +
T Consensus 89 k~~~~~m~~d--~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------~~~~~~v~diM~p~~~ 160 (496)
T 4fxs_A 89 KIFEAGVVTH--PVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------TDLTKSVAAVMTPKER 160 (496)
T ss_dssp HHCCC--CBC--CCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC------CCTTSBGGGTSEEGGG
T ss_pred cccccccccC--ceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc------ccCCCcHHHHhcCCCC
Confidence 4567789876 4599999999999999999999999999988999999999999721 123578999998 3 5
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++++++++.++++.|.++ +.+.+||+|++|+++|+||++|++++
T Consensus 161 ~vtv~~~~~l~ea~~~m~~~--~i~~lpVVDe~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 161 LATVKEGATGAEVQEKMHKA--RVEKILVVNDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp CCEEECC----CGGGTCC-----CCCEEEECTTSBCCEEECCC-----
T ss_pred CEEECCCCCHHHHHHHHHHc--CCCEEEEEcCCCCEEEeehHhHHHHh
Confidence 88999999999999999999 99999999999999999999999875
No 96
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.43 E-value=2.9e-13 Score=122.18 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=101.6
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC-CcEEEEeeHHHHHHHHHhc-----CCc-------hh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE-YHLIGTFTDGDLRRTLKAS-----GEG-------IF 275 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~-~~~~G~it~~dl~~~~~~~-----~~~-------~~ 275 (336)
.+|+++|.+...+++++++.|+.++++.|.+++++.+||++++ ++++|+|+.+|++..+... ... ..
T Consensus 22 ~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 101 (334)
T 2qrd_G 22 RTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFR 101 (334)
T ss_dssp SBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCB
T ss_pred CchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhc
Confidence 6899999987767789999999999999999999999999976 7999999999999866321 000 00
Q ss_pred hhhH----hhhcCCCC--eeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCc-----EEEEEehhhHhhc
Q 019775 276 KLTV----GEMCNRSP--RTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNI-----LIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i----~~~~~~~~--~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~-----~iGiit~~di~~~ 334 (336)
...+ .++|.+++ .++.+++++.++++.|.++ +...+||+|++|. ++|+||..|++++
T Consensus 102 ~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~--~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~ 169 (334)
T 2qrd_G 102 LLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKS--RARRIPLIDVDGETGSEMIVSVLTQYRILKF 169 (334)
T ss_dssp HHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHS--CCSEEEEEEEETTTTEEEEEEEEEHHHHHHH
T ss_pred hhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHC--CceEEEEEeCCCCcCccceEEEeeHHHHHHH
Confidence 1122 33466666 8899999999999999998 8999999987654 9999999999863
No 97
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.43 E-value=3.5e-13 Score=127.98 Aligned_cols=116 Identities=11% Similarity=0.158 Sum_probs=103.9
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEc--CCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC-
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVID--EEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR- 285 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd--~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~- 285 (336)
..++++|.++ +++++++.++.++++.|.+++++.+||+| ++++++|+|+.+||+... . ...++.++|.+
T Consensus 90 ~~~~~im~~~--~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---~---~~~~v~~im~~~ 161 (491)
T 1zfj_A 90 KRSENGVIID--PFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS---D---YNAPISEHMTSE 161 (491)
T ss_dssp HHHTTTTSSS--CCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS---C---SSSBTTTSCCCS
T ss_pred hhHHhcCcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc---c---CCCcHHHHcCCC
Confidence 3568899986 56899999999999999999999999999 789999999999998531 1 25789999998
Q ss_pred CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++++++++.++++.|.++ +...+||+|++|+++|+||+.||++.
T Consensus 162 ~~~~v~~~~~l~~a~~~m~~~--~~~~lpVVd~~g~lvGivt~~Dil~~ 208 (491)
T 1zfj_A 162 HLVTAAVGTDLETAERILHEH--RIEKLPLVDNSGRLSGLITIKDIEKV 208 (491)
T ss_dssp CCCCEETTCCHHHHHHHHHHT--TCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHc--CCCEEEEEcCCCcEEEEEEHHHHHHH
Confidence 888999999999999999999 99999999999999999999999863
No 98
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.42 E-value=1.4e-14 Score=136.66 Aligned_cols=115 Identities=19% Similarity=0.188 Sum_probs=3.4
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcC-C-C
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCN-R-S 286 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~-~-~ 286 (336)
..++++|.++ ++++++++++.+++++|.+++++.+||+| +++++|+||.+||+.... ...++.++|. + +
T Consensus 88 k~~~~~m~~~--~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~------~~~~V~~vMtp~~~ 158 (490)
T 4avf_A 88 KKHETAIVRD--PVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPN------AGDTVAAIMTPKDK 158 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccC--ceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccc------cCCcHHHHhccCCC
Confidence 4678889877 45899999999999999999999999999 899999999999964221 2578999998 4 6
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++++++++.++++.|.++ +.+.+||+|++|+++|+||++|++++
T Consensus 159 ~vtv~~~~~l~ea~~~m~~~--~i~~lpVVDe~g~lvGiIT~~Dil~~ 204 (490)
T 4avf_A 159 LVTAREGTPLEEMKAKLYEN--RIEKMLVVDENFYLRGLVTFRDIEKA 204 (490)
T ss_dssp ------------------------------------------------
T ss_pred CEEECCCCcHHHHHHHHHHc--CCCEEEEEcCCCcEEEEEehHHhhhh
Confidence 88999999999999999999 99999999999999999999999975
No 99
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.41 E-value=2.2e-14 Score=136.06 Aligned_cols=116 Identities=19% Similarity=0.094 Sum_probs=2.3
Q ss_pred hhhhc-cccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCC---CcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 210 KVQDV-MKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEE---YHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 210 ~v~~i-m~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~---~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
+..++ |.++ ++++++++|+.+++++|.+++++.+||+|++ ++++|+||.+||+.. . .....++.++|.+
T Consensus 97 ~~~e~gM~~~--~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~---~~~~~~V~diM~~ 169 (503)
T 1me8_A 97 KNFKAGFVVS--DSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L---TQTETKVSDMMTP 169 (503)
T ss_dssp HTTTC---------------------------------------------------------------------------
T ss_pred hhcccCcccC--CeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h---ccccCcHHHHhCC
Confidence 34455 8886 5589999999999999999999999999976 899999999999864 1 1135789999998
Q ss_pred C--CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 S--PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 ~--~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+ +.++.+++++.++++.|.++ +.+.+||+|++|+++|+||.+||++.
T Consensus 170 ~~~~~tv~~~~sl~ea~~~m~~~--~i~~lpVVDe~g~lvGiIT~~Dil~~ 218 (503)
T 1me8_A 170 FSKLVTAHQDTKLSEANKIIWEK--KLNALPIIDDDQHLRYIVFRKDYDRS 218 (503)
T ss_dssp ---------------------------------------------------
T ss_pred CCCCEEEcCCCcHHHHHHHHHHc--CCCEEEEEcCCCeEEEEEEecHHHHh
Confidence 7 89999999999999999999 99999999999999999999999874
No 100
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.40 E-value=2.1e-14 Score=136.44 Aligned_cols=116 Identities=19% Similarity=0.284 Sum_probs=4.7
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC--C
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR--S 286 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~--~ 286 (336)
..++++|.++ +++++++.++.+++++|.+++++.+||+|++++++|+||.+|++... ....++.++|.+ +
T Consensus 95 ~~~~~iM~~~--~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------~~~~~v~~im~~~~~ 166 (494)
T 1vrd_A 95 KKTENGIIYD--PITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------NLSKKIKDLMTPREK 166 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCccC--CeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------CCCCcHHHHhCCCCC
Confidence 4578889886 56899999999999999999999999999889999999999998631 125789999998 8
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 167 ~~~v~~~~~l~ea~~~m~~~--~~~~lpVVd~~g~lvGiIt~~Dll~~ 212 (494)
T 1vrd_A 167 LIVAPPDISLEKAKEILHQH--RIEKLPLVSKDNKLVGLITIKDIMSV 212 (494)
T ss_dssp --------------------------------------------CHHH
T ss_pred CeEECCCCCHHHHHHHHHHc--CCcEEEEEcCCCeEEEEEEHHHHHhh
Confidence 89999999999999999999 99999999999999999999999874
No 101
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.38 E-value=4.5e-14 Score=130.65 Aligned_cols=128 Identities=13% Similarity=0.110 Sum_probs=8.2
Q ss_pred hcCCCCchhhhhh--hhh---hhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcC---CCcEEEEeeHHHHHHHH
Q 019775 196 ANHPAGRIGKSLI--FKV---QDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDE---EYHLIGTFTDGDLRRTL 267 (336)
Q Consensus 196 ~~~~~~~~~~~~~--~~v---~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~---~~~~~G~it~~dl~~~~ 267 (336)
-.|++.+++.... .+| +..|..++. ++.|+.|+.|+.+++.+++++.+||+++ +++++|+||.+|++..
T Consensus 120 vIH~n~sie~Qa~~V~~VKr~e~g~i~dPv--tl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~- 196 (556)
T 4af0_A 120 IIHHNCSAEEQAAMVRRVKKYENGFITDPL--CLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ- 196 (556)
T ss_dssp EECCSSCHHHHHHHHHHHHHCCC---------------------------------------------------------
T ss_pred EEcCCCCHHHHHHHHHHHHhcccCccCCCe--EcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-
Confidence 3466666655431 122 234555543 8999999999999999999999999986 5799999999998642
Q ss_pred HhcCCchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 268 KASGEGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 268 ~~~~~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
. ...++.++|.+++++++++.+++++.++|.++ +.+.+||||++|+++|+||++|+.+.
T Consensus 197 d------~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~--kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 197 D------AETPIKSVMTTEVVTGSSPITLEKANSLLRET--KKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp -------------------------------------------------------------------
T ss_pred c------cceEhhhhcccceEEecCCCCHHHHHHHHHHc--cccceeEEccCCcEEEEEEechhhhh
Confidence 1 25789999999999999999999999999999 99999999999999999999999875
No 102
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.27 E-value=1e-13 Score=132.27 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=69.3
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcC---CCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDE---EYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR 285 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~---~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~ 285 (336)
.+++++|.++ .++++++.++.++.++|.+++++.+||+|+ +++++|+||.+|+..... .....++.++|.+
T Consensus 108 ~~~~~im~~~--~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~----~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 108 KNFEQGFITD--PVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE----KDHTTLLSEVMTP 181 (514)
T ss_dssp HTCCTTSCSS--CCCCCC-----------------CEESCC--------CCEECTTTTC--------------------C
T ss_pred hhhhhccccC--CEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh----ccCCCCHHHHhCC
Confidence 4678899876 448999999999999999999999999997 589999999999976321 1125789999998
Q ss_pred --CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 286 --SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 286 --~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
++.++.+++++.++++.|.++ +.+.+||+|++|+++|+||+.||+++
T Consensus 182 ~~~~~tv~~~~~l~ea~~~m~~~--~~~~lpVVd~~g~lvGiIt~~Dll~~ 230 (514)
T 1jcn_A 182 RIELVVAPAGVTLKEANEILQRS--KKGKLPIVNDCDELVAIIARTDLKKN 230 (514)
T ss_dssp CBCCCCEETTCCSTTTTTHHHHH--TCSCCCEESSSSCCC----CCCCSSC
T ss_pred CCCCeEECCCCCHHHHHHHHHHc--CCCcccEECCCCeEEEEEEHHHHHHH
Confidence 899999999999999999999 99999999999999999999999864
No 103
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.21 E-value=1.1e-12 Score=124.04 Aligned_cols=112 Identities=19% Similarity=0.311 Sum_probs=1.3
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCee
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPRT 289 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (336)
..+++|..+ +++++++.++.++.+.|.+++++.+||+|+ ++++|+|+.+||+. . ...++.++|.+++.+
T Consensus 94 ~~~~~m~~~--~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~--~------~~~~v~~im~~~~~~ 162 (486)
T 2cu0_A 94 RAERLIVED--VITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA--R------EGKLVKELMTKEVIT 162 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhccccC--ceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc--C------CCCCHHHHccCCCeE
Confidence 345677765 568999999999999999999999999997 89999999999986 1 256899999988899
Q ss_pred eCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 290 IGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 290 v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+++++++.++++.|.++ +.+.+||+|++|+++|+||++||++.
T Consensus 163 v~~~~~l~eal~~m~~~--~~~~lpVVde~g~lvGiiT~~Dil~~ 205 (486)
T 2cu0_A 163 VPESIEVEEALKIMIEN--RIDRLPVVDERGKLVGLITMSDLVAR 205 (486)
T ss_dssp ---------------------------------------------
T ss_pred ECCcCcHHHHHHHHHHc--CCCEEEEEecCCeEEEEEEHHHHHHh
Confidence 99999999999999999 99999999998999999999999874
No 104
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.18 E-value=3.2e-11 Score=82.45 Aligned_cols=69 Identities=20% Similarity=0.315 Sum_probs=60.0
Q ss_pred CccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCeee
Q 019775 221 LPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPRTI 290 (336)
Q Consensus 221 ~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~~v 290 (336)
.+++++++|+.+|+++|.+++++++||+| +|+++|++|.+||...+...+......++.++|.++|.++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 35789999999999999999999999998 6899999999999987766555555778999999888653
No 105
>2q8n_A Glucose-6-phosphate isomerase; TM1385, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: 2PE; 1.82A {Thermotoga maritima MSB8}
Probab=99.11 E-value=8.4e-11 Score=108.95 Aligned_cols=108 Identities=17% Similarity=0.227 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc------------CCeeeecC--CccccccccCCCCCCc-E
Q 019775 40 LPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL------------GIKSGFLN--PLDALHGDIGILSSDD-I 104 (336)
Q Consensus 40 ~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~------------g~~~~~~~--~~~~~~~~~~~~~~~d-l 104 (336)
.+.++++++.+.+. ++|+++|.|.|+.-+..+...|... +.++++++ +...+...+..+++++ +
T Consensus 65 ~~~i~~~a~~i~~~-~~Vv~IGIGGS~LG~~~~~~aL~~~~~~~~~~~~~~~~~~v~~~~nvdp~~~~~~l~~L~~~~Tl 143 (460)
T 2q8n_A 65 IDSVKSLEDWIINF-DTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVVDNVDPDLMSSVLDRIDPKTTL 143 (460)
T ss_dssp HHHHHTTHHHHTTC-SEEEEECCGGGTHHHHHHHHHHSCTTGGGSCTTTTTTCCEEEEECSCCHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHhcCC-CEEEEEecCchHHHHHHHHHHHHhhhhcccccccccCCcceEEecCCCHHHHHHHHhcCCCCCEE
Confidence 57888899999888 6999999999999999999999754 56777777 5555666666776655 8
Q ss_pred EEEEeCCCCcHHHHHHHHHHHHc-----C---CeEEEEeCCCCCccccccCE
Q 019775 105 LVMFSKSGNTEELLKVVPCAKAK-----G---AYLVSVTSVEGNALAAVCDM 148 (336)
Q Consensus 105 vi~iS~sG~~~~~~~~~~~ak~~-----g---~~vi~IT~~~~s~l~~~ad~ 148 (336)
+|++|.||.|.|++.+++.+|++ | .++|+||++..++|.+.||.
T Consensus 144 vIviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~VAvT~~~~s~L~~~A~~ 195 (460)
T 2q8n_A 144 FNVISKSGSTAEVMATYSIARGILEAYGLDPREHMLITTDPEKGFLRKLVKE 195 (460)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHHHHHTTCCGGGTEEEEECSSSSHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHhcCCccCeEEEEeCCCCChHHHHHHH
Confidence 99999999999999999999988 7 89999999999999999986
No 106
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=98.90 E-value=8.6e-08 Score=87.39 Aligned_cols=154 Identities=10% Similarity=0.043 Sum_probs=119.2
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEE
Q 019775 28 QDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILV 106 (336)
Q Consensus 28 ~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi 106 (336)
.+.+++..+ ..+.++++++.+.++ +++|++|.|..+.+|.+.+.+|.++ .+++..++..+..+.....++++..+|
T Consensus 204 p~~~~~~l~--~~~~~~~~a~~~~~~-~~~~~lGrG~~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi 280 (372)
T 3tbf_A 204 RALVMGALK--LDTEIDQISEYFSDK-EHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIV 280 (372)
T ss_dssp HHHHHHHHT--THHHHHHHHGGGTTC-CEEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEE
T ss_pred HHHHHHHHh--ChHHHHHHHHHHhcc-CCEEEEecCcCHHHHHHHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEE
Confidence 334444442 245677888888888 6999999999999999999999987 888888888999999999999999999
Q ss_pred EEeCCCCc-HHHHHHHHHHHHcCCeEEEEeCCCCCcc-ccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 019775 107 MFSKSGNT-EELLKVVPCAKAKGAYLVSVTSVEGNAL-AAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMM 184 (336)
Q Consensus 107 ~iS~sG~~-~~~~~~~~~ak~~g~~vi~IT~~~~s~l-~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~ 184 (336)
++...+.. ..+...++..+.+|+++++||+.....+ ...+|.++.+|... ...+.+.....+.+|...+.
T Consensus 281 ~~~~~d~~~~k~~~~~~e~~~rg~~vi~i~~~~~~~~~~~~~~~~i~~p~~~--------~~l~pl~~~i~~Qlla~~~A 352 (372)
T 3tbf_A 281 AVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGH--------DFSAPVVFTIPLQLLSYHVA 352 (372)
T ss_dssp EEECSSTTHHHHHHHHHHHHHTTCEEEEEEEGGGGGGCCCTTCEEEEECCCS--------TTHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCchHHHHHHHHHHHHHcCCeEEEEECCCcccccccccceEEECCCCc--------hhHhHHHHHHHHHHHHHHHH
Confidence 98766654 5577889999999999999998643133 35678888887432 23355556677888888888
Q ss_pred hhcCCChH
Q 019775 185 GARNLTRD 192 (336)
Q Consensus 185 ~~~~~~~~ 192 (336)
..+|.+++
T Consensus 353 ~~rG~d~D 360 (372)
T 3tbf_A 353 IIKGTDVD 360 (372)
T ss_dssp HHHTCCCB
T ss_pred HHcCcCcC
Confidence 88776654
No 107
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.88 E-value=2.8e-09 Score=72.65 Aligned_cols=68 Identities=19% Similarity=0.301 Sum_probs=57.4
Q ss_pred CccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCCee
Q 019775 221 LPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSPRT 289 (336)
Q Consensus 221 ~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~~~ 289 (336)
++++++++++.++++.|.+++++.+||+|+ |+++|+||.+|+...+...+......++.++|.+++.+
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 357899999999999999999999999996 89999999999999876544333467899999877654
No 108
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=98.83 E-value=2.9e-09 Score=97.47 Aligned_cols=107 Identities=18% Similarity=0.239 Sum_probs=87.3
Q ss_pred hHHHHHHHHHH-cCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecC--CccccccccCCCCC-CcEEEEEeCCCCcHH
Q 019775 41 PHTLTFTQTLL-KCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLN--PLDALHGDIGILSS-DDILVMFSKSGNTEE 116 (336)
Q Consensus 41 ~~i~~~~~~i~-~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~~-~dlvi~iS~sG~~~~ 116 (336)
+.++++++. . +. ++|+++|.|.|+.-+..+...|...+.+++++. +.+.+......+++ +.++|++|.||.|.|
T Consensus 54 ~~i~~i~~~-~~~~-~~Vv~iGIGGS~LG~~~~~~aL~~~~~~~~~~~n~dp~~~~~~l~~l~~~~TlviviSKSGtT~E 131 (415)
T 1zzg_A 54 REVRRYREA-NPWV-EDFVLIGIGGSALGPKALEAAFNESGVRFHYLDHVEPEPILRLLRTLDPRKTLVNAVSKSGSTAE 131 (415)
T ss_dssp HHHHHHHHT-CTTC-SEEEEECCGGGTHHHHHHHHHHCCSCCEEEEECSCCHHHHHHHHHHSCGGGEEEEEEESSSCCHH
T ss_pred HHHHHHHHH-hcCC-CEEEEEccCccHHHHHHHHHHHhcCCCceEEecCCCHHHHHHHHhhCCCCCEEEEEEeCCCCCHH
Confidence 467777777 4 34 699999999999999999888875456677776 55555555666744 559999999999999
Q ss_pred HHHHHHHHHHc-----C----CeEEEEeCCCCCccccccCEE
Q 019775 117 LLKVVPCAKAK-----G----AYLVSVTSVEGNALAAVCDMN 149 (336)
Q Consensus 117 ~~~~~~~ak~~-----g----~~vi~IT~~~~s~l~~~ad~~ 149 (336)
++..++.+|++ | .++|+||++.+++|.+.|+..
T Consensus 132 T~~~~~~ar~~l~~~~G~~~~~~~vavT~~~~s~L~~~a~~~ 173 (415)
T 1zzg_A 132 TLAGLAVFLKWLKAHLGEDWRRHLVVTTDPKEGPLRAFAERE 173 (415)
T ss_dssp HHHHHHHHHHHHHHHHGGGGGGGEEEEECSSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccCeEEEEeCCCCChHHHHHHHh
Confidence 99999999988 8 899999999999999998754
No 109
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=98.83 E-value=1.2e-07 Score=86.43 Aligned_cols=144 Identities=14% Similarity=0.148 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCc-HHHH
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT-EELL 118 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~-~~~~ 118 (336)
+.++++++.+.++ ++++++|.|..+.+|.+.+.+|.++ .+++..++..+..+.....++++..+|++...|.. ..+.
T Consensus 212 ~~~~~~a~~~~~~-~~~~~lG~G~~~~~A~E~aLKl~E~~~i~ae~~~~~E~~HGp~~lv~~~~~vi~~~~~~~~~~~~~ 290 (368)
T 1moq_A 212 KRIEALAEDFSDK-HHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLK 290 (368)
T ss_dssp THHHHHHHHHTTC-SEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEESCCHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CcEEEEeCCCCHHHHHHHHHHHHHHhccccccccHHHhccCcHHHcCCCceEEEEEcCCchHHHHH
Confidence 5688899999888 5999999999999999999999988 88888888888888888899999999999888776 6788
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 119 KVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 119 ~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
+.++.++++|+++++|++.....+...+|..+.+|...+ ..+.+.....++++...+...+|.++++
T Consensus 291 ~~~~e~~~~g~~v~~i~~~~~~~~~~~~~~~i~~p~~~~--------~l~pl~~~v~~qlla~~~A~~~G~dpd~ 357 (368)
T 1moq_A 291 SNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEE--------VIAPIFYTVPLQLLAYHVALIKGTDVDQ 357 (368)
T ss_dssp HHHHHTGGGTCCEEEEEEGGGCCCCBTTEEEEEECCCCG--------GGHHHHHHHHHHHHHHHHHHHHTCCSSS
T ss_pred HHHHHHHHcCCeEEEEECCCcchhcccCCceEEcCCCch--------hHHHHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 889999999999999998755556677888887765322 2344555668888888888888766544
No 110
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=98.81 E-value=1.9e-07 Score=83.64 Aligned_cols=148 Identities=18% Similarity=0.153 Sum_probs=113.0
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEE
Q 019775 28 QDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILV 106 (336)
Q Consensus 28 ~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi 106 (336)
.+.+++..+. .+.++++++.+.+ + +++++|.|..+.+|.+.+.+|.++ .+++..+...+..+.....++++..+|
T Consensus 165 ~~~~~~~l~~--~~~~~~~a~~~~~-~-~~~~lG~G~~~~~A~E~aLKl~E~~~i~a~~~~~~E~~HGp~~li~~~~~vi 240 (325)
T 2e5f_A 165 SKATEKSLEY--ERYIREIVESFDF-Q-NIIFLGSGLLYPVALEASLKMKEMSIFWSEAYPTFEVRHGFKAIADEKTLVV 240 (325)
T ss_dssp HHHHHHHHTT--HHHHHHHHHHCCC-S-EEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGGGTTGGGGCSTTEEEE
T ss_pred HHHHHHHHcC--hHHHHHHHHHhcC-C-CEEEEccCCCHHHHHHHHHHHHHHHHHHhhhcCHHHhhhccHhhcCCCCeEE
Confidence 3444444433 3568888888877 6 999999999999999999999988 777788888888888899999999999
Q ss_pred EEeCCCCc-HHHHHHHHHHHHcCCeEEEEeCCCCCcccccc-CEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 019775 107 MFSKSGNT-EELLKVVPCAKAKGAYLVSVTSVEGNALAAVC-DMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMM 184 (336)
Q Consensus 107 ~iS~sG~~-~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~a-d~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~ 184 (336)
++. +.. +.+.+.++.++++|+++++|++... ..+ |..+.+|...+ ...+ +...+.++++...+.
T Consensus 241 ~~~--~~~~~~~~~~~~e~~~~g~~v~~i~~~~~----~~~~~~~~~~p~~~~----~l~p----l~~~~~~qlla~~~a 306 (325)
T 2e5f_A 241 LMV--EEPFEWHEKLVKEFKNQGAKVLVISNSPQ----DLGQDYSIELPRLSK----DANP----IPYLPIVQLLSYYKA 306 (325)
T ss_dssp EEE--SSCCHHHHHHHHHHHHTTCEEEEEESCCC----CCSCSEEEECCCCCT----TTTT----TTHHHHHHHHHHHHH
T ss_pred EEe--CchHHHHHHHHHHHHHcCCeEEEEeCCcc----cccCCcEEEeCCCch----hHHH----HHHHHHHHHHHHHHH
Confidence 999 444 5589999999999999999997532 445 67777764322 1122 233477788888888
Q ss_pred hhcCCChHH
Q 019775 185 GARNLTRDE 193 (336)
Q Consensus 185 ~~~~~~~~~ 193 (336)
..+|.++++
T Consensus 307 ~~~G~dpd~ 315 (325)
T 2e5f_A 307 VSRGLNPDN 315 (325)
T ss_dssp HHTTCCTTS
T ss_pred HHcCCCCCC
Confidence 888876654
No 111
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=98.80 E-value=2.1e-07 Score=85.05 Aligned_cols=153 Identities=10% Similarity=0.066 Sum_probs=121.0
Q ss_pred HHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEE
Q 019775 30 HLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMF 108 (336)
Q Consensus 30 ~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~i 108 (336)
.++...+. .+.++++++.+.++ ++++++|.|.++.+|.+.+.+|.++ .+++..+...+..+.....++++..+|++
T Consensus 210 ~~~~~l~~--~~~~~~~a~~~~~~-~~~~~lG~G~~~~~A~E~aLKl~E~s~i~ae~~~~~E~~HGp~ali~~~~~vi~l 286 (375)
T 2zj3_A 210 LIKEVLSM--DDEIQKLATELYHQ-KSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMI 286 (375)
T ss_dssp HHHHHHTT--HHHHHHHHHHHTTC-SEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCSTTSCEEEE
T ss_pred HHHHHHhh--hHHHHHHHHHHhCC-CCEEEEccCCCHHHHHHHHHHHHHHhhhccccccHHHhccCcHHHcCCCCeEEEE
Confidence 34444433 46788999999998 5999999999999999999999988 88888888888888889899999888888
Q ss_pred eCCCCc-HHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhc
Q 019775 109 SKSGNT-EELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGAR 187 (336)
Q Consensus 109 S~sG~~-~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~ 187 (336)
...+.. ..+.+.++..+.+|+++++|++..+..+...+|.++.+|...+ ..+.+...+.++++...+...+
T Consensus 287 ~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~i~~p~~~~--------~l~pl~~~v~~Qlla~~~A~~~ 358 (375)
T 2zj3_A 287 IMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVD--------CLQGILSVIPLQLLAFHLAVLR 358 (375)
T ss_dssp ECSSTTHHHHHHHHHHHHHTTCCCEEEEETTCHHHHHHCSSEEEECCCCT--------TTHHHHHTHHHHHHHHHHHHHT
T ss_pred ECCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhhhccCcEEEcCCCch--------hHHHHHHHHHHHHHHHHHHHHc
Confidence 666654 6688999999999999999997654455556777888875322 2244455688899999999888
Q ss_pred CCChHH
Q 019775 188 NLTRDE 193 (336)
Q Consensus 188 ~~~~~~ 193 (336)
|.++++
T Consensus 359 G~dpd~ 364 (375)
T 2zj3_A 359 GYDVDF 364 (375)
T ss_dssp TCCSSS
T ss_pred CCCCCC
Confidence 876653
No 112
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.76 E-value=1.2e-08 Score=85.70 Aligned_cols=101 Identities=19% Similarity=0.129 Sum_probs=53.9
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCC-CCe
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNR-SPR 288 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~-~~~ 288 (336)
+++++|.+. ++++++++++.+++++|.+++.+.+||+|++|+++|+||.+|++..+..... ..+.+.+ .+.
T Consensus 73 ~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~------~~~~~~~l~~~ 144 (213)
T 1vr9_A 73 SVFNKVSLP--DFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALA------MDVPGIRFSVL 144 (213)
T ss_dssp BSGGGCBCT--TCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC-----------------
T ss_pred cHHHHccCC--CEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhc------CCCCcEEEEEE
Confidence 589999986 4599999999999999999999999999988999999999999987765321 1111111 011
Q ss_pred eeCCCccHHHHHHHhcCCCCCccEeEEEeCCC
Q 019775 289 TIGPDAMAVEAMQKMESPPSPVQFLPVINRQN 320 (336)
Q Consensus 289 ~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~ 320 (336)
......++.++.+.|.++ +.+.++|++..|
T Consensus 145 ~~~~~~~l~~~~~~l~~~--~~~~l~V~~~~~ 174 (213)
T 1vr9_A 145 LEDKPGELRKVVDALALS--NINILSVITTRS 174 (213)
T ss_dssp --------------------------------
T ss_pred eCCCCccHHHHHHHHHHC--CCcEEEEEEEec
Confidence 113334599999999999 999999885433
No 113
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=98.71 E-value=8.4e-07 Score=86.13 Aligned_cols=145 Identities=13% Similarity=0.129 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCc-HHH
Q 019775 40 LPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT-EEL 117 (336)
Q Consensus 40 ~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~-~~~ 117 (336)
.+.+.++++.+.+. ++++++|.|..+.+|.+.+.+|.++ .+++..+...+..+.....++++..+|++...|.. +.+
T Consensus 451 ~~~~~~la~~l~~~-~~~~~lG~G~~~~~A~e~alKl~E~s~i~ae~~~a~e~~HGp~~lv~~~~~vi~i~~~~~~~~~~ 529 (608)
T 2bpl_A 451 DKRIEALAEDFSDK-HHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKL 529 (608)
T ss_dssp HHHHHHHHGGGTTC-CEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEEGGGGGGTGGGGCCTTCEEEEEECSSTTHHHH
T ss_pred hHHHHHHHHHhhCC-CeEEEEecCcCHHHHHHHHHHHHHhccccceeecHHHhhhchHHHcCCCceEEEEECCChhHHHH
Confidence 35678888888788 5999999999999999999999988 78888888888888888889999999999888887 578
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 118 LKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 118 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
.+.++.++++|+++++|++.....+...+|.++.+|... ...+.+...+.++++...++..++.++++
T Consensus 530 ~~~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~i~~p~~~--------~~l~pl~~~v~~Qlla~~~A~~~G~dpD~ 597 (608)
T 2bpl_A 530 KSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVE--------EVIAPIFYTVPLQLLAYHVALIKGTDVDQ 597 (608)
T ss_dssp HHHHHHHHHTTCEEEEEEETTSCCCCBTTEEEEEECCCC--------GGGHHHHHHHHHHHHHHHHHHHHTCCSSS
T ss_pred HHHHHHHHHcCCeEEEEECCCchhhcccCCcEEEcCCCc--------chHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999864466777788888887432 23345556688899988888888766544
No 114
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=98.70 E-value=4.4e-07 Score=83.17 Aligned_cols=161 Identities=12% Similarity=0.107 Sum_probs=117.6
Q ss_pred HHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcC---CeeeecCCccccccccCCCCCC
Q 019775 26 SQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLG---IKSGFLNPLDALHGDIGILSSD 102 (336)
Q Consensus 26 ~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~~~ 102 (336)
...+.+++..+.- .+.++++++. ++ +++|++|.|.++.+|.+.+.+|.++- ..+..++..+..+.....++++
T Consensus 206 ~lp~~~~~~l~~~-~~~~~~~a~~--~~-~~~~~lGrG~~~~~A~E~ALKlkE~s~g~i~a~~~~~~e~~HGP~alvd~~ 281 (393)
T 3odp_A 206 SISMQGEKVLVNN-VELMKKIVGE--KF-KRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDE 281 (393)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHTT--CC-SEEEEECCTHHHHHHHHHHHHHHHHTTSSSEEEEECHHHHTTTGGGGCCTT
T ss_pred HHHHHHHHHHHhh-HHHHHHHHhc--CC-CeEEEEeCCcCHHHHHHHHHHHHHHhhccchheeecHhhheeccccccCCC
Confidence 3344444444332 2345555554 67 69999999999999999999999874 6777888888888888899999
Q ss_pred cEEEEEeCCCCc-HH-HHHHHHHHHHcC--CeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHH
Q 019775 103 DILVMFSKSGNT-EE-LLKVVPCAKAKG--AYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDT 178 (336)
Q Consensus 103 dlvi~iS~sG~~-~~-~~~~~~~ak~~g--~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~ 178 (336)
..+|++...+.. +. -..+++.++.+| +++++||+..+..+...+|.+|.+|.... .......+.+.....+.+
T Consensus 282 ~pvi~~~~~d~~t~~~~~~~~~ev~arg~~~~vi~i~~~~~~~~~~~~~~~i~~p~~~~---~~~~~~l~pi~~~ip~Ql 358 (393)
T 3odp_A 282 TLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYFIAINKEEQ---EYEDDSFLSLDYLLNAQM 358 (393)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHHHSSSCCEEEEEEEECCHHHHTTCSEEEEEESSCC---CCSSGGGGHHHHHHHHHH
T ss_pred ceEEEEEcCCchhhHHHHHHHHHHHhcCCCceEEEEEcCCcchhccCCcEEEEeCCccc---cCCChHHhHHHHHHHHHH
Confidence 999999766653 21 246889999998 99999998766677778999998881100 001233455666778888
Q ss_pred HHHHHHhhcCCChHH
Q 019775 179 VAIAMMGARNLTRDE 193 (336)
Q Consensus 179 l~~~~~~~~~~~~~~ 193 (336)
|...++..+|.++++
T Consensus 359 lay~~A~~~G~dpD~ 373 (393)
T 3odp_A 359 YAFINSMELGIGPDN 373 (393)
T ss_dssp HHHHHHHHHTCCTTC
T ss_pred HHHHHHHHcCCCCCC
Confidence 988898888877654
No 115
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=98.67 E-value=7.3e-07 Score=81.17 Aligned_cols=153 Identities=8% Similarity=0.093 Sum_probs=107.8
Q ss_pred HHHHHHhcCChhHHHHHHHH-HHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEE
Q 019775 30 HLNYFFQHLSLPHTLTFTQT-LLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVM 107 (336)
Q Consensus 30 ~l~~~~~~~~~~~i~~~~~~-i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~ 107 (336)
.+++..+. .+.++++++. +.+. ++++++|.|..+.+|.+.+.+|.++ .+++..+...+..+.....++++..+|+
T Consensus 200 ~~~~~l~~--~~~~~~~a~~~~~~~-~~~~~lG~G~~~~~A~e~alKl~E~s~i~ae~~~a~E~~HGp~~lv~~~~~vi~ 276 (367)
T 2poc_A 200 QIKQVLKL--ENKIKDLCNSSLNDQ-KSLLLLGRGYQFATALEGALKIKEISYMHSEGVLAGELKHGILALVDEDLPIIA 276 (367)
T ss_dssp HHHHHGGG--HHHHHHHHHSGGGGC-SEEEEEECGGGHHHHHHHHHHHHHHHCCEEEEEETTCC-----------CCEEE
T ss_pred HHHHHHhc--hHHHHHHHHHHhccC-CcEEEEcCCCChHHHHHHHHHHHHHhccccccccHHHhccchHhhccCCCcEEE
Confidence 34444433 4567888888 8888 5999999999999999999999988 8888888888888888888888888888
Q ss_pred EeCCCC-cHHHHHHHHHHHHcCCeEEEEeCCCCCccccccC-EEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHh
Q 019775 108 FSKSGN-TEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCD-MNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMG 185 (336)
Q Consensus 108 iS~sG~-~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad-~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~ 185 (336)
+...|. ...+.+.++..+.+|+++++|++..+..+...+| .++.+|...+ ..+.+...+.++++...+..
T Consensus 277 i~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~~~~~~~~i~~p~~~~--------~l~pl~~~~~~Qlla~~~A~ 348 (367)
T 2poc_A 277 FATRDSLFPKVMSAIEQVTARDGRPIVICNEGDAIISNDKVHTTLEVPETVD--------CLQGLLNVIPLQLISYWLAV 348 (367)
T ss_dssp ECCGGGCCHHHHHHHHHHHHTTCCCEEEEETTCCSCC---CCEEEEECCCCG--------GGHHHHHHHHHHHHHHHHHH
T ss_pred EEcCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhhccCCccEEEeCCCch--------hHHHHHHHHHHHHHHHHHHH
Confidence 766555 4778999999999999999999765555666666 7788875322 23455566888999999998
Q ss_pred hcCCChHH
Q 019775 186 ARNLTRDE 193 (336)
Q Consensus 186 ~~~~~~~~ 193 (336)
.+|.++++
T Consensus 349 ~~G~dpd~ 356 (367)
T 2poc_A 349 NRGIDVDF 356 (367)
T ss_dssp HTTCCCC-
T ss_pred HcCCCCCC
Confidence 88876654
No 116
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=98.61 E-value=4.5e-07 Score=82.39 Aligned_cols=138 Identities=9% Similarity=0.040 Sum_probs=99.7
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
.++++++.+.++ +++|++|.|..+.+|.+.+.+|.++ ++++..++..+..+.....++++..+|++...+. ....++
T Consensus 212 ~~~~~a~~~~~~-~~~~~lGrG~~~~~A~EgALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~~~-~~~~~~ 289 (366)
T 3knz_A 212 WAQTNALALRDS-ADIRLTGPATLFGTVQEGALKMLETLRCPVSGYEFEEFIHGIYNAFNAQSALIMLDPQPD-ARQDRL 289 (366)
T ss_dssp HHHHTHHHHHTC-SEEEEEECGGGHHHHHHHHHHHHHHHCSCEEEEEHHHHHHTHHHHCCTTEEEEEECSSCC-HHHHHH
T ss_pred HHHHHHHHhcCC-CeEEEEeCCCCHHHHHHHHHHHHHHhcccceeechhhcCcCchhhhCCCceEEEEecCch-HHHHHH
Confidence 467777788888 6999999999999999999999987 8888888778888888888999999999876554 446788
Q ss_pred HHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 121 VPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
++.++++|+++++||+.... .+..+.+|.... ...+.+.....+.+|...+...+|.++++
T Consensus 290 ~~~l~~~g~~vi~i~~~~~~-----~~~~~~~p~~~~-------~~l~pl~~~v~~Qllay~~A~~rG~d~D~ 350 (366)
T 3knz_A 290 AQILGEWTPSIYRIGPQVEN-----NGLNLNFPFVND-------EDFAVFEYIIPLQMLCAILPPQKGINPAI 350 (366)
T ss_dssp HHHHHHHCSCEEEEESSSCC-----SSSSEECCCCCC-------TTTTHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHcCCeEEEEecCCCc-----cceeEEeCCCCc-------hHHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 88999999999999986431 344455554322 12244455566788888888888776654
No 117
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.59 E-value=5e-08 Score=78.80 Aligned_cols=57 Identities=16% Similarity=0.309 Sum_probs=54.0
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
..++.++|.+++.++.+++++.++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~--~~~~~pVvd~~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEH--QIGCAPVVDQNGHLVGIITESDFLRG 73 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHT--TCSEEEEECTTSCEEEEEEGGGGGGG
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHc--CCeEEEEEcCCccEEEEEEHHHHHHH
Confidence 5789999999999999999999999999999 99999999999999999999999864
No 118
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=98.58 E-value=6.6e-07 Score=80.65 Aligned_cols=137 Identities=16% Similarity=0.138 Sum_probs=107.0
Q ss_pred HHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCc-HHHHHH
Q 019775 43 TLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT-EELLKV 120 (336)
Q Consensus 43 i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~-~~~~~~ 120 (336)
++++++.+.++ +++|++|.|.++.+|.+.+.+|.++ .+++..++..+..+.....++++..+|++...+.+ +...++
T Consensus 195 ~~~~a~~~~~~-~~~~~lG~G~~~~~A~E~ALKlkE~s~i~ae~~~~~E~~HGP~ali~~~~~vi~~~~~~~~~~~~~~~ 273 (344)
T 3fj1_A 195 WPEMRVAIGAR-PSLFTLGRGTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAAGDAAEAPLAEI 273 (344)
T ss_dssp CHHHHHHHHHS-CCEEEEECGGGHHHHHHHHHHHHHHHCCCEEEEETTTGGGSSSCHHHHTCCEEECCCSSTTHHHHHHH
T ss_pred HHHHHHHHhCC-CcEEEEECCCCHHHHHHHHHHHHHHhccCceeecHHhhccchHhhhcCCceEEEEecCCchHHHHHHH
Confidence 56677788888 5999999999999999999999987 88888888899999999999999999999877776 447789
Q ss_pred HHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 121 VPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
++.++++|+++++|++.... +..+..+.. .....+.+.....+.+|...+...+|.++++
T Consensus 274 ~~e~~~~g~~v~~i~~~~~~------~~~i~~~~~-------~~~~~~pl~~~~~~Qlla~~~a~~~G~d~D~ 333 (344)
T 3fj1_A 274 ADQIAAKGATVFATTGRVTR------ARVLEHVRS-------GHALTDPLSLIVSFYSMVEAFASERGIDPDA 333 (344)
T ss_dssp HHHHHHTTCCEEESSTTCSS------SEECCCCCC-------SSTTTHHHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHcCCeEEEEeCCCCC------cceEEeCCC-------CchhHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999976432 222222111 1223355666777888888888888766554
No 119
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=98.57 E-value=1.6e-06 Score=79.32 Aligned_cols=156 Identities=10% Similarity=0.142 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcC---CeeeecCCccccccccCCCCC
Q 019775 25 KSQQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLG---IKSGFLNPLDALHGDIGILSS 101 (336)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~~ 101 (336)
+...+.++++.+. .+.++++++. ++ +++|++|.|..+.+|.+.+.+|.++- +++..++..+..+.....+++
T Consensus 206 ~~lp~~~~~~l~~--~~~i~~~a~~--~~-~~~~~lGrG~~y~~A~EgALKlkE~s~Gei~a~~~~~~e~kHGP~alid~ 280 (389)
T 3i0z_A 206 EVVSSLARKVLDK--AEDVKELVDL--DF-NRVIYLGAGPFFGLAHEAQLKILELTAGQVATMYESPVGFRHGPKSLIND 280 (389)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHTS--CC-SEEEEEESTHHHHHHHHHHHHHHHHHTTSSEEEEECHHHHTTTGGGGCCT
T ss_pred HHHHHHHHHHHhC--hHHHHHHHhc--CC-CeEEEEcCCCCHHHHHHHHHHHHHHccCcccceeecHhhccccchhhcCC
Confidence 3344444444443 1345555554 66 69999999999999999999999884 788888888888888999999
Q ss_pred CcEEEEEeCCCCcHH--HHHHHHHHHHc--CCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHH
Q 019775 102 DDILVMFSKSGNTEE--LLKVVPCAKAK--GAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGD 177 (336)
Q Consensus 102 ~dlvi~iS~sG~~~~--~~~~~~~ak~~--g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d 177 (336)
+..+|++...+.... ...+++..+.+ |+++++||+. +..+...+|+.+..+... ....+.+.....+.
T Consensus 281 ~~pVi~~~~~d~~~~~~~~~~~~ev~arg~g~~vi~i~~~-~~~~~~~~~~~i~~~~~~-------~~~l~pl~~~vp~Q 352 (389)
T 3i0z_A 281 NTVVLVFGTTTDYTRKYDLDLVREVAGDQIARRVVLLSDQ-AFGLENVKEVALGCGGVL-------NDIYRVFPYIVYAQ 352 (389)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHHHHHHTCSSEEEEEESS-CCCCTTCEEEECCCSSCS-------CGGGGHHHHHHHHH
T ss_pred CceEEEEEcCCchhhHHHHHHHHHHHhccCCCeEEEEECC-CcccccCceEEecCCCCc-------chHHHHHHHHHHHH
Confidence 999999987665422 35678999988 7999999985 334444444443332111 22335566678889
Q ss_pred HHHHHHHhhcCCChHH
Q 019775 178 TVAIAMMGARNLTRDE 193 (336)
Q Consensus 178 ~l~~~~~~~~~~~~~~ 193 (336)
+|...++..+|.++++
T Consensus 353 llAy~~A~~rG~dpD~ 368 (389)
T 3i0z_A 353 LFALLTSLKVENKPDT 368 (389)
T ss_dssp HHHHHHHHHTTCCTTS
T ss_pred HHHHHHHHHcCCCCCC
Confidence 9999999998877654
No 120
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=98.56 E-value=6.1e-07 Score=80.49 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=90.8
Q ss_pred HHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCc-HHHHHHHHH
Q 019775 46 FTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT-EELLKVVPC 123 (336)
Q Consensus 46 ~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~-~~~~~~~~~ 123 (336)
+++.+.++ +++|++|.|..+.+|.+.+.+|.++ ++++..++..+..+.....++++..+|++...+.+ +.+.++++.
T Consensus 197 ~a~~~~~~-~~~~~lG~G~~~~~A~E~ALKlkE~~~i~ae~~~~~E~~HGP~alv~~~~~vi~~~~~~~~~~~~~~~~~e 275 (334)
T 3hba_A 197 RAGSLTDV-KNLVVLGRGFGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIRDESYGSHVEQIAN 275 (334)
T ss_dssp CGGGTTTC-CEEEEEECTHHHHHHHHHHHHHHHHHCCEEEEEETTTCC-----------CEEEEECCSTTHHHHHHHHHH
T ss_pred HHHHHhCC-CeEEEEeCCcCHHHHHHHHHHHHHHcCcceEEecHHhhccchHHhcCCCceEEEEecCchhHHHHHHHHHH
Confidence 34445566 6999999999999999999999987 88888888888899999999999999998877776 457789999
Q ss_pred HHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 124 AKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 124 ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
++++|+++++|++.. +.. ....+.+.....+.++...+...+|.++++
T Consensus 276 ~~~~g~~v~~i~~~~--------------~~~--------~~~l~pl~~~v~~Qlla~~~A~~rG~d~D~ 323 (334)
T 3hba_A 276 VKQRGANLIHLHQTS--------------ADI--------HPRIAPLALLQRFYIDVAAVAIALGINPDK 323 (334)
T ss_dssp HHHTTCCEEEEECSC--------------TTS--------CTTTHHHHHHHHHHHHHHHHHHHTTCCTTC
T ss_pred HHHcCCeEEEEECCC--------------CCc--------chhHhhHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999753 221 123355666778888989999888876654
No 121
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=98.54 E-value=8.4e-07 Score=80.21 Aligned_cols=138 Identities=12% Similarity=0.070 Sum_probs=104.0
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
.++++++.+.++ +++|++|.|..+.+|.+.+.+|.+. ..++..++..+..+.....++++..+|++...+++. ..++
T Consensus 197 ~~~~~a~~~~~~-~~~~~lGrG~~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~~~~~-~~~~ 274 (352)
T 3g68_A 197 WIERNKEKLVNS-KEIRIIGHSDIYGDTLEAALKLLETMRIPVTGYEFEEFIHGIYNAINSDSTIFILDTGKEPR-VTKM 274 (352)
T ss_dssp HHHHTHHHHHTC-CEEEEEECGGGHHHHHHHHHHHHHHHCSCEEEEEHHHHHTTGGGGCCTTEEEEEEECSCCTT-HHHH
T ss_pred HHHHHHHHHhCC-CcEEEEeCCCCHHHHHHHHHHHHHHhcccccccchhhccccchheeCCCceEEEEECCchHH-HHHH
Confidence 466677777788 6999999999999999999999987 788887877888888899999999999987655443 5677
Q ss_pred HHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 121 VPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
++.++++|+++++|++.... .+..+.+|.... ...+.+.....+.+|...+...+|.++++
T Consensus 275 ~~~~~~~g~~v~~i~~~~~~-----~~~~~~~p~~~~-------~~~~pl~~~v~~Qlla~~~A~~~G~d~D~ 335 (352)
T 3g68_A 275 IDVLSGWTENVFAIGRDVTE-----NDKNLKIDITDN-------PYYQTFNFIVPIQLICGEIPTLRGVDPSV 335 (352)
T ss_dssp HHHHHTTCSCEEEEESSCCC-----STTCEECCCCSC-------TTGGGGTTTHHHHHHHHHSGGGGTCCTTS
T ss_pred HHHHHHcCCeEEEEecCCCC-----CceeEEeCCCCc-------hhHhHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 88899999999999986431 344455554322 11233334466788888888888776654
No 122
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=98.50 E-value=9.3e-06 Score=73.17 Aligned_cols=150 Identities=17% Similarity=0.160 Sum_probs=112.7
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHH-HHHHhc-CCeeeecCCccccccccCCCCCCcE
Q 019775 27 QQDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKIS-QTLISL-GIKSGFLNPLDALHGDIGILSSDDI 104 (336)
Q Consensus 27 ~~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~-~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dl 104 (336)
..+.+++..+.. .+.++++++.+.++ +++|++|.|..+.+|.+.+ .+|.++ ++++..++..+..+.....++++..
T Consensus 186 lp~~~~~~l~~~-~~~~~~~a~~~~~~-~~~~~lGrG~~~~~A~E~A~LKlkE~s~i~ae~~~a~E~~HGP~ali~~~~p 263 (347)
T 3fkj_A 186 FSDVVHGAQRQV-QEDAQRFAAEWKDE-KVVYMMGSGPSFGAAHQESICILLEMQWINSASIHSGEYFHGPFEITEPGTP 263 (347)
T ss_dssp HHHHHHHHHHHT-HHHHHHHHHHHTTC-SEEEEEECGGGHHHHHHHHHHTHHHHHCCEEEEEETTGGGGTGGGGCCTTCE
T ss_pred HHHHHHHHHHHh-HHHHHHHHHHHhCC-CcEEEEECCCCHHHHHHHHHHHHHHHcCcCcceeeHHHhcCCcccccCCCce
Confidence 344444444433 25778888888888 5999999999999999998 788887 8999999889999999999999999
Q ss_pred EEEEeCCCCcHH-HHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 019775 105 LVMFSKSGNTEE-LLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAM 183 (336)
Q Consensus 105 vi~iS~sG~~~~-~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~ 183 (336)
+|++...+.+.+ ..++++.+++.|+++++|+.... .+ .. ++ .......+.+.....+.+|...+
T Consensus 264 vi~~~~~d~~~~~~~~~~~~~~~~g~~v~~i~~~~~-~~---~~----~~-------~~~~~~l~pl~~~v~~Qlla~~~ 328 (347)
T 3fkj_A 264 FILLQSSGRTRPLDDRAIRFIERYQGKLQLIDADKL-GI---QD----LS-------TDVGEYFCGLLHNCVLDVYNLAL 328 (347)
T ss_dssp EEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEGGGG-TS---TT----TC-------TTTGGGGHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHHHhCCeEEEEeCCcc-cc---cc----CC-------CCcchhHHHHHHHHHHHHHHHHH
Confidence 999988777754 44677888889999999975321 11 11 11 11133445666778889999999
Q ss_pred HhhcCCChHH
Q 019775 184 MGARNLTRDE 193 (336)
Q Consensus 184 ~~~~~~~~~~ 193 (336)
...++.++++
T Consensus 329 A~~~G~d~D~ 338 (347)
T 3fkj_A 329 ATARNHPLTT 338 (347)
T ss_dssp HHHTTCCTTC
T ss_pred HHHhCcCCCC
Confidence 9888877654
No 123
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.50 E-value=2.7e-06 Score=77.56 Aligned_cols=139 Identities=9% Similarity=0.071 Sum_probs=107.4
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCc-HHHHH
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT-EELLK 119 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~-~~~~~ 119 (336)
.++++++.+.++ ++++++|.|..+.+|.+.+.+|.+. .+++..+...+..+.....++++..+|++...+.. ..+..
T Consensus 213 ~~~~~a~~~~~~-~~~~~lG~G~~~~~A~E~aLKl~E~s~i~a~~~~~~E~~HGp~ali~~~~~vi~l~~~~~~~~~~~~ 291 (373)
T 2aml_A 213 FYERWQEEFATA-PKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETASAVTERLVL 291 (373)
T ss_dssp HHHHHHHHHTTC-CCEEEEECTTHHHHHHHHHHHHHHHTCSCEEEEEHHHHTTTGGGGCCTTCEEEEEECCSTTHHHHHH
T ss_pred HHHHHHHHHhCC-CcEEEEeCCCCHHHHHHHHHHHHHHhhhhceeccHHHhccccHHhcCCCCeEEEEECCCchHHHHHH
Confidence 567788888888 5999999999999999999999987 77777787888888888889999998888766654 56788
Q ss_pred HHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 120 VVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 120 ~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
+++.++++|+++++|++.. + . .+..+.+|.... ...+.+.....++++...+...+|.++++
T Consensus 292 ~~~~~~~~g~~v~~i~~~~---~-~-~~~~i~ip~~~~-------~~l~pl~~~v~~Qlla~~~A~~~G~dpd~ 353 (373)
T 2aml_A 292 LRDYESKYTPFTYTVKFGK---G-E-DDRTLVIPTDLD-------EYQAPFLMILPFQILAHHIAELKGNKLTE 353 (373)
T ss_dssp HHHHHTTTCSCEEEEEESC---C-S-STTEEEECSCCC-------TTTTHHHHTHHHHHHHHHHHHHTTCCTTS
T ss_pred HHHHHHHcCCcEEEEECCC---C-C-CCcEEEcCCCCc-------chHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 8899999999999999753 2 2 234566663222 12233444568888988898888866544
No 124
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.44 E-value=2.5e-07 Score=62.91 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=41.2
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhh
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVS 333 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~ 333 (336)
+.++.+++++.+|++.|.++ +...+||+|+ |+++|++|..|+++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~--~i~~~~V~d~-~~lvGIvT~~Di~~ 45 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRN--KAGSAVVMEG-DEILGVVTERDILD 45 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHT--TCSEEEEEET-TEEEEEEEHHHHHH
T ss_pred CEEECCCCcHHHHHHHHHHc--CCCEEEEEEC-CEEEEEEEHHHHHH
Confidence 46899999999999999999 9999999986 99999999999975
No 125
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=98.42 E-value=2.9e-06 Score=76.41 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=100.9
Q ss_pred HHHHH-HHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 43 TLTFT-QTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 43 i~~~~-~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
+.+++ +.+.++ ++++++|.|..+.+|.+.+.+|.++ .+++..+...+..+.....++++..+|++...|.-+.+.++
T Consensus 201 ~~~~a~~~l~~~-~~~~~lG~G~~~~~A~e~aLKl~E~s~i~a~~~~~~E~~HGp~~~v~~~~~vi~~~~~~~~~~~~~~ 279 (342)
T 1j5x_A 201 WKVIEKIDLKEH-DHFVFLGMSEFFGVSLESALKCIEMSLTFSEAYSTLEYRHGPKALVKKGTLVFMQKVSGMDEQEKRL 279 (342)
T ss_dssp HHHHHTSCGGGC-CEEEEECCTHHHHHHHHHHHHHHHHHCCEEEEECGGGGGTTGGGGCCTTEEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHhcCC-CeEEEEcCCCCHHHHHHHHHHHHHHhhhheeeccHHHhcCCchhhhCCCceEEEEECCchHHHHHHH
Confidence 66666 666777 5999999999999999999999987 78888888888888889899999999999888833468889
Q ss_pred HHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 121 VPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
++.++++|+++++|++.. .+.+| . . ..+.+.....++++...+...+|.++++
T Consensus 280 ~~~~~~~g~~v~~i~~~~----------~i~~p-~--------~-~l~pl~~~v~~qlla~~~A~~~G~dpd~ 332 (342)
T 1j5x_A 280 RKELESLGATVLEVGEGG----------DIPVS-N--------D-WKSAFLRTVPAQILGYQKAISRGISPDK 332 (342)
T ss_dssp HHHHHHTTCEEEEESTTS----------SBCCC-C--------S-GGGGGGTTHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHcCCeEEEEecCC----------eEeec-H--------H-HHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999752 12333 1 1 1122333457788888888888776654
No 126
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin, crystallography motility; 2.30A {Geobacillus stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A* 2pgi_A
Probab=98.40 E-value=3.7e-07 Score=84.35 Aligned_cols=113 Identities=18% Similarity=0.162 Sum_probs=85.7
Q ss_pred hHHHHHHHHHH-cCCCeEEEEeccchHHHHHHHHHHHHhcC-------Ceeeec-C--CccccccccCCC-CCCcEEEEE
Q 019775 41 PHTLTFTQTLL-KCRGTIFFTGVGKSGFVANKISQTLISLG-------IKSGFL-N--PLDALHGDIGIL-SSDDILVMF 108 (336)
Q Consensus 41 ~~i~~~~~~i~-~a~~~I~i~G~G~s~~~a~~~~~~l~~~g-------~~~~~~-~--~~~~~~~~~~~~-~~~dlvi~i 108 (336)
+.++++++.+. +. +.|+++|.|.|+.-+..+...|.... .+++++ . +...+......+ .++.++|++
T Consensus 59 ~~i~~~a~~v~~~~-~~VV~IGIGGS~LG~~~v~~aL~~~~~~~~~~~~~~~fv~~NvDp~~i~~~l~~l~~~~Tlvivi 137 (445)
T 1b0z_A 59 SRIKQAAERIRNHS-DALVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSINVI 137 (445)
T ss_dssp HHHHHHHHHHHHHC-SEEEEECCGGGTHHHHHHHHHHSCTTGGGSTTSCEEEEESSSCCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHhcC-CEEEEEecChhHHHHHHHHHHHhhhcccccccCCceEEEeCCCCHHHHHHHHhhCCcCcEEEEEE
Confidence 35666666664 35 69999999999988888888776542 566666 3 334445445555 567899999
Q ss_pred eCCCCcHHHHHHHHHHHH-----cC-----CeEEEEeCCCCCccccccCEE----EEcCC
Q 019775 109 SKSGNTEELLKVVPCAKA-----KG-----AYLVSVTSVEGNALAAVCDMN----VHLPV 154 (336)
Q Consensus 109 S~sG~~~~~~~~~~~ak~-----~g-----~~vi~IT~~~~s~l~~~ad~~----i~~~~ 154 (336)
|.||.|.|++..++.+|+ .| .++|+||++..++|.+.|+.. |.++.
T Consensus 138 SKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~~vavT~~~~g~L~~~a~~~Gi~~F~~~d 197 (445)
T 1b0z_A 138 SKSGTTTEPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRTKGALKKLADQEGYETFVIPD 197 (445)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHCHHHHGGGEEEEECSSCSHHHHHHHHHTCEEEECCT
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhcCchhhcCEEEEEecCCcchhHHHHHHhCCeEEeccC
Confidence 999999999999999997 37 789999999888998887643 45554
No 127
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.39 E-value=7.3e-07 Score=67.39 Aligned_cols=58 Identities=14% Similarity=0.324 Sum_probs=52.2
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
+++++|.+. ++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|++..+..
T Consensus 63 ~v~~~~~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 63 TIEEIMTRN--VITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp BGGGTSBSS--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred CHHHHhcCC--CeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 688999876 4589999999999999999999999999988999999999999987653
No 128
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.35 E-value=5.2e-07 Score=68.99 Aligned_cols=59 Identities=15% Similarity=0.308 Sum_probs=53.2
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.++++.|.+++...+||+|++|+++|+||..|++..+.+
T Consensus 68 ~~v~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 68 EKLGEELLET--VRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCCGGGCBC--CCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred CcHHHHccCC--CcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 3678999876 4589999999999999999999999999989999999999999987753
No 129
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.34 E-value=1.2e-06 Score=67.16 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=50.6
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
+++++|.+ .+++++++++.+++++|.+++...+||+|++|+++|+||.+|++..+..
T Consensus 70 ~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 70 DIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp CGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred CHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 57888875 4589999999999999999999999999988999999999999988764
No 130
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.34 E-value=1.2e-06 Score=67.34 Aligned_cols=57 Identities=21% Similarity=0.180 Sum_probs=51.5
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
.+++++|.+ .+++++++++.++++.|.+++...+||+|++|+++|+||.+|++..+.
T Consensus 70 ~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 70 EIMLRAADE---IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHSBC---CCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhHHHhccC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 467889954 458999999999999999999999999998899999999999998875
No 131
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.33 E-value=9.1e-07 Score=69.49 Aligned_cols=59 Identities=27% Similarity=0.294 Sum_probs=54.0
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.+++++|.+++.+.+||+|++|+++|+||.+|++..+..
T Consensus 85 ~~v~~~m~~~--~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 85 KLVGDLMTPA--PLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp CBHHHHSEES--CCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ccHHHhcCCC--ceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 4788999986 4589999999999999999999999999988999999999999998865
No 132
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.32 E-value=9.7e-07 Score=70.01 Aligned_cols=60 Identities=22% Similarity=0.311 Sum_probs=54.1
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhc
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKAS 270 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~ 270 (336)
..+++++|.+. ++++++++++.+++++|.+++++.+||+| +|+++|+||..||+..+...
T Consensus 77 ~~~v~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 77 ATRVEEIMTAK--VRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp SCBHHHHSBSS--CCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred ccCHHHHcCCC--CcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 34788999986 45899999999999999999999999999 79999999999999998763
No 133
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.32 E-value=8.5e-07 Score=67.72 Aligned_cols=57 Identities=25% Similarity=0.261 Sum_probs=50.5
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
.+++++|.+ .+++++++++.++++.|.+++...+||+|++|+++|+||.+|++..+.
T Consensus 69 ~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 69 FSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp CCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC-
T ss_pred CCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 367889966 348999999999999999999999999998999999999999998654
No 134
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.32 E-value=1.2e-06 Score=67.28 Aligned_cols=59 Identities=22% Similarity=0.294 Sum_probs=53.5
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+...+..
T Consensus 67 ~~v~~~~~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 67 TKAEEFMTAS--LITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp CBGGGTSEEC--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred cCHHHHcCCC--CEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 4688999876 4589999999999999999999999999988999999999999988765
No 135
>2wu8_A Glucose-6-phosphate isomerase; gluconeogenesis, 5-phosphoarabinonate (PAB), PGI, cytoplasm, glycolysis; 2.25A {Mycobacterium tuberculosis}
Probab=98.32 E-value=9.5e-07 Score=83.21 Aligned_cols=113 Identities=20% Similarity=0.197 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHc----------CCCeEEEEeccchHHHHHHHHHHHHhc---CCeeeecC--CccccccccCCC-CCCcE
Q 019775 41 PHTLTFTQTLLK----------CRGTIFFTGVGKSGFVANKISQTLISL---GIKSGFLN--PLDALHGDIGIL-SSDDI 104 (336)
Q Consensus 41 ~~i~~~~~~i~~----------a~~~I~i~G~G~s~~~a~~~~~~l~~~---g~~~~~~~--~~~~~~~~~~~~-~~~dl 104 (336)
+.++++++.+.+ - +.|+++|.|.|+.-...+...|... +.++++++ +...+...+..+ .++.+
T Consensus 121 ~~i~~fa~~vr~g~~~g~~g~~i-~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~~~~~l~~l~~e~TL 199 (549)
T 2wu8_A 121 DAMGAFTDRLRSGEWTGATGKRI-STVVNIGIGGSDLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTL 199 (549)
T ss_dssp HHHHHHHHHHHHTCSBCSSSCBC-CEEEEECCGGGTHHHHHHHHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHhCCcccCCCCcc-ceEEEEeccchHHHHHHHHHHHHhhccCCCeEEEEccCCHHHHHHHHhcCCCCcEE
Confidence 366777777754 4 6999999999998888888888764 67888886 344445555555 45678
Q ss_pred EEEEeCCCCcHHHHHHHHHHHHc-----C-----CeEEEEeCCCCCcccccc-C--EEEEcCCC
Q 019775 105 LVMFSKSGNTEELLKVVPCAKAK-----G-----AYLVSVTSVEGNALAAVC-D--MNVHLPVE 155 (336)
Q Consensus 105 vi~iS~sG~~~~~~~~~~~ak~~-----g-----~~vi~IT~~~~s~l~~~a-d--~~i~~~~~ 155 (336)
+|++|.||.|.|++..++.+|+. | .++|+||++. +++.+.+ | .+|.++..
T Consensus 200 vIViSKSGtT~ETl~na~~ar~~l~~~~G~~~~~~h~VAvT~~~-s~~~~~gid~~~~F~~~d~ 262 (549)
T 2wu8_A 200 FIVASKTFSTLETLTNATAARRWLTDALGDAAVSRHFVAVSTNK-RLVDDFGINTDNMFGFWDW 262 (549)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHHHHHHHCGGGGGGTEEEECSCH-HHHHHHTCCGGGEECCCTT
T ss_pred EEEEeCCCCCHhHHHHHHHHHHHHHHhcCcchhcCEEEEECCCc-HHHHhcCcccccEEEeeec
Confidence 99999999999999999999988 8 6899999875 6787777 5 77777654
No 136
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.32 E-value=9.5e-07 Score=67.74 Aligned_cols=57 Identities=21% Similarity=0.266 Sum_probs=51.5
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
.+++++|.+ ++++++++++.++++.|.+++...+||+|++|+++|+||.+|++..+.
T Consensus 72 ~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 72 KQLGAVMRP---IQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp SBHHHHSEE---CCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCHHHHhcC---CcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 367889965 458999999999999999999999999998899999999999998765
No 137
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.31 E-value=9.8e-07 Score=71.52 Aligned_cols=60 Identities=27% Similarity=0.286 Sum_probs=54.4
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+|++|+++|+||.+||+..+..
T Consensus 97 ~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 97 GKVVGDLMTPS--PLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TCBHHHHSEES--CCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred cccHHHHhCCC--ceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 44689999987 4589999999999999999999999999989999999999999998764
No 138
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.31 E-value=1.4e-06 Score=69.15 Aligned_cols=59 Identities=12% Similarity=0.141 Sum_probs=53.5
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+ . +++++++++.++++.|.+++...+||+|++|+++|+||..||+..+..
T Consensus 95 ~~~v~~im~~-~--~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 95 AKNASEIMLD-P--VYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp SCBHHHHCBC-C--CCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHcCC-C--eEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 3478999998 4 489999999999999999999999999988999999999999988764
No 139
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.30 E-value=1.3e-06 Score=69.42 Aligned_cols=58 Identities=21% Similarity=0.244 Sum_probs=51.3
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+. ++++++++++.+++++|.++++ +||+|++|+++|+||.+|++..+..
T Consensus 85 ~~~v~~im~~~--~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 85 DTDIVHMTKTD--VAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp TSBGGGTCBCS--CCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ccCHHHhhcCC--ceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHHH
Confidence 45789999987 4599999999999999987764 9999999999999999999998754
No 140
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.28 E-value=9.7e-07 Score=59.72 Aligned_cols=45 Identities=11% Similarity=0.204 Sum_probs=42.0
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
+.++.+++++.++++.|.++ +...+||+|+ |+++|+||..|++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~--~~~~~pV~d~-~~l~Givt~~dl~~~ 46 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRN--KAGSAVVMEG-DEILGVVTERDILDK 46 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHT--TCSEEEEEET-TEEEEEEEHHHHHHH
T ss_pred CeEECCCCcHHHHHHHHHHc--CCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 46799999999999999999 8999999998 999999999999875
No 141
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=98.28 E-value=9e-06 Score=72.75 Aligned_cols=149 Identities=15% Similarity=0.119 Sum_probs=108.5
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHH-HHHHhc-CCeeeecCCccccccccCCCCCCcEE
Q 019775 28 QDHLNYFFQHLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKIS-QTLISL-GIKSGFLNPLDALHGDIGILSSDDIL 105 (336)
Q Consensus 28 ~~~l~~~~~~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~-~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlv 105 (336)
.+.+++..+.. .+.++++++.+.++ +++|++|.|..+.+|.+.+ .+|.++ .+++..++..+..+.....++++..+
T Consensus 169 p~~~~~~l~~~-~~~~~~~a~~~~~~-~~~~~lGrG~~~~~A~E~A~LKlkE~s~i~ae~~~a~E~~HGP~alid~~~pv 246 (329)
T 3eua_A 169 QAVYEKALKQE-ADNAKQFAKAHEKE-SIIYTMASGANYGVAYSYSICILMEMQWIHSHAIHAGEYFHGPFEIIDESVPF 246 (329)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHTTC-SBCEEEECGGGHHHHHHHHHTTTHHHHCCBCCEEETTGGGGTGGGGCCTTSCE
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhcCC-CeEEEEcCCcCHHHHHHHHHHHHHHHcccCcccccHHHhccCcHhhccCCceE
Confidence 33444443332 25677888888888 5999999999999999998 688887 88888888899999999999999999
Q ss_pred EEEeCCCCcHHH-HHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 019775 106 VMFSKSGNTEEL-LKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMM 184 (336)
Q Consensus 106 i~iS~sG~~~~~-~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~ 184 (336)
|++...+.+.+. .++++.+++.|.++++|+.... .+. . ++. ......+.+.....+.+|...+.
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~~-~~~---~----~~~-------~~~~~l~pl~~~~~~Qlla~~~a 311 (329)
T 3eua_A 247 IILLGLDETRPLEERALTFSKKYGKKLTVLDAASY-DFT---A----IDD-------SVKGYLAPLVLNRVLRSYADELA 311 (329)
T ss_dssp EEEECSSTTHHHHHHHHHHHHHHCCCEEEEEGGGS-CCT---T----SCH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcchHHHHHHHHHHHHcCCeEEEEeCCcc-ccc---C----CCC-------CchHHHHHHHHHHHHHHHHHHHH
Confidence 999877777643 4567788889999999986321 111 0 110 01223345556677888888888
Q ss_pred hhcCCChHH
Q 019775 185 GARNLTRDE 193 (336)
Q Consensus 185 ~~~~~~~~~ 193 (336)
..++.++++
T Consensus 312 ~~~G~d~D~ 320 (329)
T 3eua_A 312 EERNHPLSH 320 (329)
T ss_dssp HHTTCCTTC
T ss_pred HHhCcCCCC
Confidence 888776554
No 142
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.28 E-value=5.5e-07 Score=72.78 Aligned_cols=57 Identities=14% Similarity=0.233 Sum_probs=50.9
Q ss_pred hhhHhhhcC--CCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCC-CcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCN--RSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQ-NILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~-~~~iGiit~~di~~~ 334 (336)
..++.++|. +++.++.+++++.++++.|.++ +...+||++++ |+++|+||..|++++
T Consensus 41 ~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~--~~~~~pVvd~~~~~lvGivt~~dl~~~ 100 (172)
T 3lhh_A 41 ERTISSLMVPRSDIVFLDLNLPLDANLRTVMQS--PHSRFPVCRNNVDDMVGIISAKQLLSE 100 (172)
T ss_dssp --CTTTTSEEGGGCCCEETTSCHHHHHHHHHTC--CCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhC--CCCEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 578999998 5678899999999999999999 99999999987 899999999999864
No 143
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.28 E-value=1.4e-06 Score=69.33 Aligned_cols=61 Identities=26% Similarity=0.429 Sum_probs=54.2
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCC---cEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEY---HLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~---~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+...++++++++++.++++.|.+++.+.+||+|++| +++|+||..||+..+.+
T Consensus 81 ~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 81 VPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp CBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred cCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 47899999833366899999999999999999999999999888 99999999999998764
No 144
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.28 E-value=1.6e-06 Score=67.98 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=52.0
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++| +. ++++++++++.++++.|.+++...+||+|++|+++|+||..|++..+..
T Consensus 88 ~~v~~~m-~~--~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 88 IELEEIL-RD--IIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp CCGGGTC-BC--CEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred ccHHHhc-CC--CeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 3678899 44 4689999999999999999999999999988999999999999988764
No 145
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.27 E-value=1.9e-06 Score=71.74 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=54.0
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.++ ++++++++++.++++.|.+++...+||+|++|+++|+||..|++..+..
T Consensus 116 ~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 116 EPLISLLSED--SRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp SBGGGGCCSS--CCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred chHHHHhcCC--CeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 3689999876 4589999999999999999999999999999999999999999998865
No 146
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.27 E-value=2e-06 Score=66.30 Aligned_cols=59 Identities=22% Similarity=0.269 Sum_probs=53.2
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+| +|+++|+||..|++..+..
T Consensus 73 ~~~v~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 73 DTQVKEIMTRQ--VAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GSBGGGTSBCS--CCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cCCHHHhccCC--CeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 34789999886 45999999999999999999999999999 7999999999999988764
No 147
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=98.27 E-value=3.4e-06 Score=76.38 Aligned_cols=137 Identities=14% Similarity=0.116 Sum_probs=105.3
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHH-HHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHH-H
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKIS-QTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEE-L 117 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~-~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~-~ 117 (336)
+.++++++.+.++ ++++++|.|..+.+|.+.+ .+|..+ .+++..+...+..+.....++++..+|++...+...+ .
T Consensus 206 ~~~~~~a~~~~~~-~~~~~lG~G~~~~~A~E~allklkE~s~i~a~~~~~~E~~HGp~ali~~~~~vi~l~~~~~~~~~~ 284 (355)
T 2a3n_A 206 PQADAIASRYHNS-DYMMWVGGAEMWGEVYLFSMCILEEMQWKRTRPVSSAEFFHGALELLEKDVPLILVKGEGKCRALD 284 (355)
T ss_dssp HHHHHHHHHHTTC-SCEEEEECGGGHHHHHHHHHHTHHHHHCCCEEEEEHHHHTTTGGGGCCTTCCEEEECCSSTTHHHH
T ss_pred HHHHHHHHHhcCC-CcEEEEcCCcCHHHHHHHHHHHHHHHcccccccccHHHhcCCcceeecCCceEEEEecCCCcHHHH
Confidence 4577888888888 5999999999999999999 888888 6788888888888888888999999998887777644 6
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHH-HHHHHHHHHHHHHHhhcCCChHH
Q 019775 118 LKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTA-IQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 118 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~-~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
.++++.++++|+++++|++.... + +.+|.. .....+.+ ...+.++++...+...+|.++++
T Consensus 285 ~~~~~~~~~~g~~v~~i~~~~~~-~-------~~~~~~-------~~~~l~pl~~~~~~~Qlla~~~A~~~G~d~D~ 346 (355)
T 2a3n_A 285 ERVERFASKITDNLVVIDPKAYA-L-------DGIDDE-------FRWIMAPCVVSTLLVDRLAAHFEKYTGHSLDI 346 (355)
T ss_dssp HHHHHHHHHHCSCEEEECGGGSC-C-------TTSCGG-------GHHHHHHHHHHHHHTTHHHHHHHHHHCCCTTC
T ss_pred HHHHHHHHHcCCeEEEEECCCcc-c-------cCCCcc-------hHhHhccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 88899999999999999864211 1 112211 11233444 66688888888888888876654
No 148
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.26 E-value=1.7e-06 Score=68.32 Aligned_cols=58 Identities=24% Similarity=0.267 Sum_probs=52.5
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++| +. +++++++.++.++++.|.+++...+||+|++|+++|+||..|++..+..
T Consensus 86 ~~v~~~m-~~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 86 AKISTIM-RD--IVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp SBGGGTC-BC--CEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred CcHHHHh-CC--CeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 3688999 54 5689999999999999999999999999988999999999999998864
No 149
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.26 E-value=9.6e-07 Score=68.35 Aligned_cols=57 Identities=21% Similarity=0.213 Sum_probs=51.2
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
.+++++|.+ ++++++++++.+++++|.+++...+||+|++|+++|+||.+|++..+.
T Consensus 70 ~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 70 DDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp CCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred cCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 478899976 458999999999999999999999999998899999999999998664
No 150
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.25 E-value=2e-06 Score=66.46 Aligned_cols=59 Identities=27% Similarity=0.481 Sum_probs=51.8
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcC-----cceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKG-----CGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.++++.|.+++ .+.+||+|++|+++|+||..|++..+..
T Consensus 73 ~~v~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 73 TTIGDVMTKD--VITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp CBHHHHSCSS--CCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred cCHHHHhCCC--cEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 3688899876 458999999999999999999 9999999988999999999999987653
No 151
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.25 E-value=8.9e-07 Score=69.62 Aligned_cols=56 Identities=18% Similarity=0.253 Sum_probs=52.3
Q ss_pred hhHhhhcCC--CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 277 LTVGEMCNR--SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 277 ~~i~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
.++.++|.+ ++..+.+++++.++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~--~~~~~~Vvd~~~~~~Givt~~dl~~~ 85 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRK--NLGMTAICDDDMNIIGIFTDGDLRRV 85 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHH--TSSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhC--CCcEEEEECCCCcEEEEecHHHHHHH
Confidence 489999998 899999999999999999999 89999999988999999999999863
No 152
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.25 E-value=1.7e-06 Score=67.30 Aligned_cols=61 Identities=15% Similarity=0.296 Sum_probs=52.0
Q ss_pred hhhhhccccCC----CCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQK----ELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+.. .++++++++++.++++.|.+++...+||+|++|+++|+||..|++..+..
T Consensus 77 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 77 LSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp SBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 36778887531 25689999999999999999999999999988999999999999988764
No 153
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.24 E-value=8.2e-07 Score=76.06 Aligned_cols=57 Identities=19% Similarity=0.338 Sum_probs=53.5
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
..++.++|.+++.++.+++++.+|++.|.++ +...+||+|++|+++|+||..|++++
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~--~~~~lpVvd~~~~l~Giit~~di~~~ 62 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDK--NLKSIPVADGNNHLLGMLSTSNITAT 62 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHT--TCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHc--CCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 5689999999999999999999999999999 99999999988999999999999864
No 154
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.24 E-value=3.1e-06 Score=66.40 Aligned_cols=59 Identities=24% Similarity=0.286 Sum_probs=52.7
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
...+++++|.+. ++++++++++.++++.|.+++. +||+|++|+++|+||..|++..+..
T Consensus 85 ~~~~v~~~m~~~--~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 85 EEMKVEQVMKQD--IPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGCBGGGTCBSS--CCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hcCCHHHHhcCC--CceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 345789999976 4599999999999999999887 9999989999999999999998765
No 155
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.23 E-value=2e-06 Score=68.83 Aligned_cols=59 Identities=15% Similarity=0.144 Sum_probs=53.4
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+|+ |+++|+||..||+..+..
T Consensus 92 ~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 92 QQSVSVAMTKN--VVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp TSBGGGTSBSS--CCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred cCCHHHHhcCC--CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 45789999976 458999999999999999999999999997 999999999999998764
No 156
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.21 E-value=2e-06 Score=65.10 Aligned_cols=58 Identities=24% Similarity=0.271 Sum_probs=51.9
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.++++.|.+++.+.+||+|+ |+++|++|..|+...+..
T Consensus 65 ~~v~~~m~~~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 65 VKVWEVMERD--LVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp SBHHHHCBCG--GGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred cCHHHHcCCC--CeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 4788999875 568999999999999999999999999997 999999999999987753
No 157
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.20 E-value=1.7e-06 Score=66.93 Aligned_cols=56 Identities=21% Similarity=0.231 Sum_probs=51.9
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhh
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVS 333 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~ 333 (336)
..++.++|.+++..+.+++++.++++.|.++ +...+||+|++|+++|+|+..|+++
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~--~~~~~~Vvd~~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEF--DVGSLVVINDDGNVVGFFTKSDIIR 61 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHH--TCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHc--CCCEEEEEcCCCcEEEEEeHHHHHH
Confidence 5678999999999999999999999999998 8999999997799999999999973
No 158
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.19 E-value=3.1e-06 Score=66.67 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=50.2
Q ss_pred hhhhccc------cCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 210 KVQDVMK------PQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 210 ~v~~im~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
+++++|. +. ++++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+.
T Consensus 88 ~v~~~m~~~~~~~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 88 SVTKALQHRSHYFEG--VLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp BGGGGGGTCCHHHHT--CSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred hHHHHHhhhhcccCC--CeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 5677775 44 568999999999999999999999999998899999999999998764
No 159
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.19 E-value=1.8e-06 Score=68.35 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=51.3
Q ss_pred hhhHhhhcC--CCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCN--RSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
..++.++|. +++.++.+++++.++++.|.++ +...+||+|++|+++|+||..|++++
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~--~~~~~~Vvd~~~~~~Giit~~dl~~~ 72 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQM--TYTRVPVVTDEKQFVGTIGLRDIMAY 72 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTC--SSSEEEEECC-CBEEEEEEHHHHHHH
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHC--CCceEeEECCCCEEEEEEcHHHHHHH
Confidence 567899998 5778999999999999999999 99999999988999999999999864
No 160
>2cxn_A Glucose-6-phosphate isomerase; 1.40A {Mus musculus} PDB: 2cvp_A 2cxo_A* 2cxp_A* 2cxq_A* 2cxr_A* 2cxs_A* 2cxt_A* 2cxu_A 1u0e_A 1u0f_A* 1u0g_A* 1jiq_A 1iri_A 1nuh_A* 1jlh_A 1iat_A 1hm5_A 1g98_A 1hox_A* 1xtb_A* ...
Probab=98.18 E-value=1.2e-05 Score=76.04 Aligned_cols=114 Identities=16% Similarity=0.159 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHcC---------CCeEEEEeccchHHHHHHHHHHHHhc---CCeeeecCC--ccccccccCCC-CCCcEE
Q 019775 41 PHTLTFTQTLLKC---------RGTIFFTGVGKSGFVANKISQTLISL---GIKSGFLNP--LDALHGDIGIL-SSDDIL 105 (336)
Q Consensus 41 ~~i~~~~~~i~~a---------~~~I~i~G~G~s~~~a~~~~~~l~~~---g~~~~~~~~--~~~~~~~~~~~-~~~dlv 105 (336)
+.++++++.+.+. -+.|+++|.|.|+.-...+...|... +.+++++.. ...+...+..+ .++.++
T Consensus 127 ~~m~~fa~~vr~g~~~g~~g~~i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~L~~e~TLv 206 (557)
T 2cxn_A 127 DKMKSFCQRVRSGDWKGYTGKSITDIINIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLASLSPETSLF 206 (557)
T ss_dssp HHHHHHHHHHHTTCSBCTTSCBCCEEEEECCGGGTHHHHHHHHHTGGGGTTSCEEEEECCSSHHHHHHHHTTCCTTTEEE
T ss_pred HHHHHHHHHHHhCCcccCCCCccceEEEEeccchHHHHHHHHHHHhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEE
Confidence 3677778877542 15999999999998888888888754 677888752 34555556667 667899
Q ss_pred EEEeCCCCcHHHHHHHHHHHH----c-C------CeEEEEeCCCCCcccccc-C--EEEEcCCC
Q 019775 106 VMFSKSGNTEELLKVVPCAKA----K-G------AYLVSVTSVEGNALAAVC-D--MNVHLPVE 155 (336)
Q Consensus 106 i~iS~sG~~~~~~~~~~~ak~----~-g------~~vi~IT~~~~s~l~~~a-d--~~i~~~~~ 155 (336)
|++|.||.|.|++..++.+|+ + | .++|+||.+. +++.+.. + .+|.++..
T Consensus 207 IViSKSGtT~ETl~na~~ar~~l~~~~G~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~ 269 (557)
T 2cxn_A 207 IIASKTFTTQETITNAETAKEWFLEAAKDPSAVAKHFVALSTNT-AKVKEFGIDPQNMFEFWDW 269 (557)
T ss_dssp EEECSSSCCHHHHHHHHHHHHHHHHHHCCGGGGGGTEEEEESCH-HHHHHHTCCGGGEEECCTT
T ss_pred EEEcCCCCChhHHHHHHHHHHHHHHhcCccchhcCEEEEEeCCc-HHHHHcCCCcccEEEeecC
Confidence 999999999999999999987 4 5 5799999875 7776665 4 47777643
No 161
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.14 E-value=3.5e-06 Score=67.08 Aligned_cols=59 Identities=19% Similarity=0.280 Sum_probs=52.8
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+|+ |+++|+||..||+..+..
T Consensus 77 ~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 77 ETPLFEVMHTD--VTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp CCBHHHHSCSC--EEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred ccCHHHHhcCC--CeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 34788999976 568999999999999999999999999997 999999999999987653
No 162
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.13 E-value=1.9e-06 Score=66.89 Aligned_cols=57 Identities=18% Similarity=0.287 Sum_probs=51.8
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCC--cEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQN--ILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~--~~iGiit~~di~~~ 334 (336)
..++.++|.+++..+.+++++.++++.|.++ +...+||+|++| +++|+||..|+++.
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~--~~~~~~Vvd~~~~~~~~Givt~~dl~~~ 62 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKN--RVGLAVLTARDNPKRPVAVVSERDILRA 62 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHH--TCSEEEEEETTEEEEEEEEEEHHHHHHH
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHc--CCCEEEEEcCCCcceeEEEEEHHHHHHH
Confidence 4578899999999999999999999999998 899999999877 99999999999863
No 163
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=98.12 E-value=3.6e-05 Score=70.40 Aligned_cols=134 Identities=16% Similarity=0.258 Sum_probs=103.2
Q ss_pred cCCCeEEEEeccchHHHHHHHHHHHHhc--C-CeeeecCCccccccccCCCCCCcEEEEEeCCCCc-HH-HHHHHHHHHH
Q 019775 52 KCRGTIFFTGVGKSGFVANKISQTLISL--G-IKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT-EE-LLKVVPCAKA 126 (336)
Q Consensus 52 ~a~~~I~i~G~G~s~~~a~~~~~~l~~~--g-~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~-~~-~~~~~~~ak~ 126 (336)
.+ ++++++|.|..+.+|.+.+.+|.++ | +++......+..+.....++++..+|+|...|.. +. ..++++.+++
T Consensus 223 ~~-~~~~~lG~G~~~~~A~E~aLKl~E~s~g~i~a~~~~~~e~~HGp~~lv~~~~~vi~~~~~~~~~~~~~~~~~~ev~a 301 (384)
T 3c3j_A 223 PW-KRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRR 301 (384)
T ss_dssp CC-SEEEEEESTTHHHHHHHHHHHHHHHTTTSSEEEEECHHHHTTTGGGGCCTTEEEEEECCSSTTHHHHHHHHHHHHHH
T ss_pred cC-CeEEEECCCCCHHHHHHHHHHHHHHhhccchhccccHhhcccCCHHHcCCCccEEEEEcCCchhhHHHHHHHHHHHh
Confidence 35 5999999999999999999999987 3 7888888888888888889999999999888876 55 7889999987
Q ss_pred c--CCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 127 K--GAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 127 ~--g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
+ |+++++|++.. ..+... +..+.+|.... .....+.+...+.+++|...++..+|.++++
T Consensus 302 r~~~~~v~~i~~~~-~~~~~~-~~~i~~p~~~~-----~~~~l~pl~~iv~~Qlla~~~A~~~G~dpD~ 363 (384)
T 3c3j_A 302 DNQAMRVIAIAAES-SDIVAA-GPHIILPPSRH-----FIDVEQAFCFLMYAQTFALMQSLHMGNTPDT 363 (384)
T ss_dssp HTCSSEEEEEESSC-CHHHHT-SSEEECCCCSC-----CCHHHHHHHHHHHHHHHHHHHHHHTTCCTTC
T ss_pred CcCCCeEEEEeCCC-cccccC-CcEEEecCccC-----CChHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 7 89999999753 344344 55666765211 1222345556788899999999988876654
No 164
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.12 E-value=3.6e-06 Score=67.03 Aligned_cols=57 Identities=30% Similarity=0.396 Sum_probs=52.4
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeC--CCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINR--QNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~--~~~~iGiit~~di~~~ 334 (336)
..++.++|.+++.++.+++++.++++.|.++ +...+||+|+ +|+++|+||..|+++.
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~--~~~~~pVvd~~~~~~~~Givt~~dl~~~ 70 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTST--DVTEYPLVESTESQILVGIVQRAQLVQA 70 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTC--CCSEEEEESCTTTCBEEEEEEHHHHHHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhC--CCCceeEEecCCCCEEEEEEEHHHHHHH
Confidence 5789999999999999999999999999999 8999999986 6999999999999753
No 165
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.11 E-value=7.4e-06 Score=64.72 Aligned_cols=59 Identities=20% Similarity=0.336 Sum_probs=52.5
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
...+++++|.+. ++++++++++.++++.|.++++ +||+|++|+++|+||..|++..+..
T Consensus 81 ~~~~v~~~m~~~--~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 81 ETMKVEEVMNRN--IPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GTCBGGGTCBCC--CCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred cCCcHHHHhCCC--CceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 345789999986 4599999999999999999887 9999988999999999999998765
No 166
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.10 E-value=2.9e-06 Score=65.10 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=50.6
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHH
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTL 267 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~ 267 (336)
.+++++|.+. ++++++++++.++++.|.+++.+.+||+|+ |+++|++|.+|++..+
T Consensus 74 ~~v~~~m~~~--~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 74 ATAGELARDS--IYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp SBHHHHHTTC--CCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred cCHHHHhcCC--CEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 4788999886 458999999999999999999999999997 8999999999998754
No 167
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.09 E-value=4.9e-06 Score=65.91 Aligned_cols=53 Identities=25% Similarity=0.323 Sum_probs=48.2
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHH
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLR 264 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~ 264 (336)
.+++++|.+ .+++++++++.++++.|.+++...+||+|++|+++|+||.+|++
T Consensus 103 ~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 103 FHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp CCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred ccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 468899976 45899999999999999999999999999899999999999975
No 168
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.08 E-value=1.7e-06 Score=68.76 Aligned_cols=57 Identities=14% Similarity=0.208 Sum_probs=52.6
Q ss_pred hhhHhhhcCC--CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNR--SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~~~ 334 (336)
..++.++|.+ ++.++.+++++.++++.|.++ +...+||+|++|+++|+||..|+++.
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~--~~~~~pVvd~~~~lvGivt~~dl~~~ 71 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKT--GYTAIPVLDPSYRLHGLIGTNMIMNS 71 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHH--CCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhC--CCcEEEEECCCCCEEEEeEHHHHHHH
Confidence 5789999988 888999999999999999998 89999999988999999999999863
No 169
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.06 E-value=3.3e-06 Score=68.87 Aligned_cols=59 Identities=25% Similarity=0.302 Sum_probs=52.6
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+|++|+++|+||..||+..+.
T Consensus 74 ~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 74 EVPIRLVMRKP--IPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GSBGGGTSBSS--CCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred cCCHHHHhCCC--CcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 34789999986 459999999999999999999999999998899999999999987543
No 170
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.04 E-value=7.2e-06 Score=66.64 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=53.9
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhc
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKAS 270 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~ 270 (336)
..+++++|.+. ++++++++++.++++.|.+++.+.+||+| +|+++|+||..||+..+...
T Consensus 107 ~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 107 TLKLRNILDLS--PFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CEECGGGEESS--CCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred CccHHHhhCcC--CeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 45788999876 45999999999999999999999999999 89999999999999988653
No 171
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.03 E-value=3.4e-06 Score=72.33 Aligned_cols=57 Identities=16% Similarity=0.385 Sum_probs=52.3
Q ss_pred hhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCC--CcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQ--NILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~--~~~iGiit~~di~~~ 334 (336)
...+.++|.+++.++.+++++.++.++|.++ +...+||||+. |+++|+|++.||+++
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~--~~~~~PVVd~~~~~~LvGiIt~~dl~~~ 70 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQT--KLKFFPFVDTPDTNTLLGSIDRTEVEGL 70 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHC--CCSEEEEESCTTTCBEEEEEEHHHHHHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhc--CCCEEEEEecCCCCeEEEEEEHHHHHHH
Confidence 5789999999999999999999999999999 99999999873 689999999999863
No 172
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.01 E-value=9.7e-06 Score=71.08 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=53.8
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.++++.|.+++...+||+|++|+++|+||..|+...+..
T Consensus 201 ~~v~~im~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 201 TLIADILNER--VISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp SBHHHHSBSC--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHcCCC--CeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 4688999876 4599999999999999999999999999988999999999999998764
No 173
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.00 E-value=5.3e-06 Score=67.08 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=57.5
Q ss_pred EEEeeHHHH--HHHHHhcCCchhhhhHhhhcCC--CCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCC-CcEEEEEehh
Q 019775 255 IGTFTDGDL--RRTLKASGEGIFKLTVGEMCNR--SPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQ-NILIGIVTLH 329 (336)
Q Consensus 255 ~G~it~~dl--~~~~~~~~~~~~~~~i~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~-~~~iGiit~~ 329 (336)
-|.++..+- +..... ....++.++|.+ ++.++.+++++.++++.|.++ +...+||++++ |+++|+|+..
T Consensus 16 ~g~l~~~e~~~i~~~l~----l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~--~~~~~pVvd~~~~~lvGivt~~ 89 (173)
T 3ocm_A 16 VPAFGVEERNMVSGVLT----LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAA--PHSFFPVCRGSLDEVVGIGRAK 89 (173)
T ss_dssp --CCCHHHHHHHHHHHH----HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHS--SCSEEEEESSSTTSEEEEEEHH
T ss_pred cCCcCHHHHHHHHHHhc----cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhC--CCCEEEEEeCCCCCEEEEEEHH
Confidence 377774443 333322 125789999964 577899999999999999999 99999999886 8999999999
Q ss_pred hHhhc
Q 019775 330 GLVSA 334 (336)
Q Consensus 330 di~~~ 334 (336)
||+++
T Consensus 90 Dl~~~ 94 (173)
T 3ocm_A 90 DLVAD 94 (173)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 174
>2o2c_A GPI, glucose-6-phosphate isomerase, glycosomal, PGI, phosphohexose; dimer; HET: G6Q; 1.58A {Trypanosoma brucei brucei} PDB: 2o2d_A* 1q50_A
Probab=97.97 E-value=7.8e-06 Score=77.75 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHcC---------CCeEEEEeccchHHHHHHHHHHHHhc---CCeeeecCC--ccccccccCCC-CCCcEE
Q 019775 41 PHTLTFTQTLLKC---------RGTIFFTGVGKSGFVANKISQTLISL---GIKSGFLNP--LDALHGDIGIL-SSDDIL 105 (336)
Q Consensus 41 ~~i~~~~~~i~~a---------~~~I~i~G~G~s~~~a~~~~~~l~~~---g~~~~~~~~--~~~~~~~~~~~-~~~dlv 105 (336)
+.++++++.+.+. -+.|+++|.|.|+.-...+...|... +.++++++. ...+...+..+ .++.++
T Consensus 175 ~~i~~fa~~vrsg~~~g~tg~~i~~VV~IGIGGS~LGp~~v~eaL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLf 254 (613)
T 2o2c_A 175 DQMRSFSEKVRTGEWKGHTGKAIRHVVNIGIGGSDLGPVMATEALKPFSQRDLSLHFVSNVDGTHIAEVLKSIDIEATLF 254 (613)
T ss_dssp HHHHHHHHHHHHTCSBCTTSCBCCEEEEECCGGGTHHHHHHHHHTGGGSCTTSEEEEECCSSHHHHHHHHHHCCGGGEEE
T ss_pred HHHHHHHHHHHhCCcccCCCCceeeEEEEeccchHHHHHHHHHHhhhhccCCceEEEEccCCHHHHHHHHhcCCCCCEEE
Confidence 3567777777542 15999999999998888888888765 578888863 44444444444 457889
Q ss_pred EEEeCCCCcHHHHHHHHHHHHc-----C-----------CeEEEEeCCCCCcccccc-C--EEEEcCCC
Q 019775 106 VMFSKSGNTEELLKVVPCAKAK-----G-----------AYLVSVTSVEGNALAAVC-D--MNVHLPVE 155 (336)
Q Consensus 106 i~iS~sG~~~~~~~~~~~ak~~-----g-----------~~vi~IT~~~~s~l~~~a-d--~~i~~~~~ 155 (336)
|++|.||.|.|++..++.+|+. | .++|+||.+. +++.+.. | .+|.++..
T Consensus 255 IViSKSGTT~ETl~na~~ar~~l~~~~G~~g~~~~~~~a~h~VAVTt~~-s~~~~~gi~~~~~F~~~d~ 322 (613)
T 2o2c_A 255 IVASKTFTTQETITNALSARRALLDYLRSRGIDEKGSVAKHFVALSTNN-QKVKEFGIDEENMFQFWDW 322 (613)
T ss_dssp EEECSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHEEEEESCH-HHHHHHTCCGGGEEECCTT
T ss_pred EEEeCCCCChhHHHHHHHHHHHHHHhcCCcccccchhhcCEEEEEeCCc-HHHHHcCCCccceEeeecC
Confidence 9999999999999999888877 6 4799999875 6776665 4 47777643
No 175
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.96 E-value=9.4e-06 Score=70.87 Aligned_cols=59 Identities=24% Similarity=0.305 Sum_probs=52.4
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+. ++++++++++.++++.|.+++...+||+|++|+++|+||..|+...+..
T Consensus 199 ~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 199 TRVAEIMNPK--VVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp CBSTTTSBSS--CCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred CcHHHHhCCC--CeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 3688999876 4599999999999999999999999999988999999999999987654
No 176
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.90 E-value=5e-05 Score=71.85 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=72.0
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCCC
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRSP 287 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~~ 287 (336)
..+++++|.+. ++++++++.++.+++++|.+++...+||+|++|+++|+||.+|++..+.... ...+.+.+-+
T Consensus 174 ~~~V~~vM~~~-~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~------a~~D~~~rl~ 246 (511)
T 3usb_A 174 SIKISDVMTKE-QLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPN------SAKDKQGRLL 246 (511)
T ss_dssp SSBHHHHCCCC-CCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTT------CCBCTTSCBC
T ss_pred CCcHHHhcccC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhccc------chhhhcccee
Confidence 45789999972 2568999999999999999999999999999999999999999999876411 1222222222
Q ss_pred e--eeCCCccHHHHHHHhcCCCCCccEeEEEeCCC
Q 019775 288 R--TIGPDAMAVEAMQKMESPPSPVQFLPVINRQN 320 (336)
Q Consensus 288 ~--~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~ 320 (336)
. .+.......+.++.+.+. +.+.+.|-..++
T Consensus 247 V~aavg~~~d~~era~aLvea--Gvd~I~Id~a~g 279 (511)
T 3usb_A 247 VGAAVGVTADAMTRIDALVKA--SVDAIVLDTAHG 279 (511)
T ss_dssp CEEEECSSTTHHHHHHHHHHT--TCSEEEEECSCT
T ss_pred eeeeeeeccchHHHHHHHHhh--ccceEEeccccc
Confidence 2 233333334444555555 677765544333
No 177
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.86 E-value=1.5e-06 Score=82.34 Aligned_cols=109 Identities=17% Similarity=0.117 Sum_probs=19.6
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHhcCCchhhhhHhhhcCCC
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRS 286 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~~~~~~~~~~i~~~~~~~ 286 (336)
...+++++|.+...+++++++.++.+++++|.+++.+.+||+|++|+++|+||.+||+..+..... ...+...++.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~--~~d~~~~l~v-- 234 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE--LVDSQKRYLV-- 234 (503)
T ss_dssp ---------------------------------------------------------------CCC--CBCTTSCBCC--
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc--hhcccccccc--
Confidence 345789999986445689999999999999999999999999999999999999999987764221 1111222211
Q ss_pred CeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcE
Q 019775 287 PRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNIL 322 (336)
Q Consensus 287 ~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~ 322 (336)
...+.. ....+.++.|.+. +.+.+.|...+|..
T Consensus 235 ~a~v~~-~~~~e~~~~l~e~--gv~~l~Vd~~~g~~ 267 (503)
T 1me8_A 235 GAGINT-RDFRERVPALVEA--GADVLCIDSSDGFS 267 (503)
T ss_dssp EEEECS-SSHHHHHHHHHHH--TCSEEEECCSCCCS
T ss_pred ccccCc-hhHHHHHHHHHhh--hccceEEecccCcc
Confidence 123344 4455556777776 67766553333433
No 178
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.78 E-value=4e-05 Score=71.97 Aligned_cols=59 Identities=24% Similarity=0.305 Sum_probs=53.9
Q ss_pred hhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.++ ++++++++++.++.+.|.+++...+||+|++|+++|+||.+|+...+..
T Consensus 219 ~~v~dim~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 219 TRVAEIMNPK--VVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp SBGGGTSBSS--CCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhCCC--CeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 4789999876 5599999999999999999999999999999999999999999998764
No 179
>1t10_A GPI, glucose-6-phosphate isomerase, PGI, phosphohexose; phosphoglucose isomerase, substrate, D-fructose-6-phosphate; HET: F6P; 2.35A {Leishmania mexicana mexicana} SCOP: c.80.1.2
Probab=97.77 E-value=0.00013 Score=69.28 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHcC---------CCeEEEEeccchHHHHHHHHHHHHhc---CCeeeecC--CccccccccCCC-CCCcEE
Q 019775 41 PHTLTFTQTLLKC---------RGTIFFTGVGKSGFVANKISQTLISL---GIKSGFLN--PLDALHGDIGIL-SSDDIL 105 (336)
Q Consensus 41 ~~i~~~~~~i~~a---------~~~I~i~G~G~s~~~a~~~~~~l~~~---g~~~~~~~--~~~~~~~~~~~~-~~~dlv 105 (336)
+.++++++.+.+. -+.|+++|.|.|+.-...+...|... +.++++++ +...+...+..+ .++.++
T Consensus 174 ~~i~~fa~~vrsg~~~g~tg~~i~~VV~IGIGGS~LGp~~v~~aL~~~~~~~~~v~fvsNvDp~~i~~~l~~l~~e~TLf 253 (605)
T 1t10_A 174 AQMKDFTERVRSGEWKGQTGKSIYNIVNIGIGGSDLGPVMVTEALKPFSKRDLHCFFVSNVDGTHMAEVLKQVNLEETIF 253 (605)
T ss_dssp HHHHHHHHHHHHSCSBCTTSCBCCEEEEECCGGGTHHHHHHHHHTGGGSCSSSEEEEECCSSTHHHHHHHTTSCGGGEEE
T ss_pred HHHHHHHHHHHhCCcccCCCCccceEEEEeccchHHHHHHHHHHhhhhccCCCeEEEEecCCHHHHHHHHhcCCCCcEEE
Confidence 3567777777542 15999999999998888888888765 57888886 344455555555 456789
Q ss_pred EEEeCCCCcHHHHHHHHHHHHc-----C-----------CeEEEEeCCCCCcccccc-C--EEEEcCCC
Q 019775 106 VMFSKSGNTEELLKVVPCAKAK-----G-----------AYLVSVTSVEGNALAAVC-D--MNVHLPVE 155 (336)
Q Consensus 106 i~iS~sG~~~~~~~~~~~ak~~-----g-----------~~vi~IT~~~~s~l~~~a-d--~~i~~~~~ 155 (336)
|++|.||.|.|++..++.+|+. | .++|+||.+. +++.+.. | .+|.++..
T Consensus 254 IViSKSGtT~ETl~na~~ar~~l~~~~g~~~~~~~~~~~~h~VavTt~~-s~~~~~gi~~~~~F~~~d~ 321 (605)
T 1t10_A 254 IIASKTFTTQETLTNAMSARNALMSYLKENGISTDGAVAKHFVALSTNT-EKVREFGIDTVNMFAFWDW 321 (605)
T ss_dssp EEECSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHEEEECSCH-HHHHHTTCCGGGEECCCTT
T ss_pred EEEeCCCCChhHHHHHHHHHHHHHHhcccccccccccccCEEEEEeCCc-hHHHHcCCCcccEEeeecc
Confidence 9999999999999999888762 2 5799999875 6776665 4 46777643
No 180
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=97.74 E-value=3.8e-05 Score=70.61 Aligned_cols=114 Identities=19% Similarity=0.189 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHc-CCCeEEEEeccchHHHHHHHHHHHHhc------CCeeeecC---CccccccccCCCC-CCcEEEEEe
Q 019775 41 PHTLTFTQTLLK-CRGTIFFTGVGKSGFVANKISQTLISL------GIKSGFLN---PLDALHGDIGILS-SDDILVMFS 109 (336)
Q Consensus 41 ~~i~~~~~~i~~-a~~~I~i~G~G~s~~~a~~~~~~l~~~------g~~~~~~~---~~~~~~~~~~~~~-~~dlvi~iS 109 (336)
+.++++++.+.+ . +.|.++|.|.|+.=+..+...|... +.+++++. +...+...+..++ ++.++|++|
T Consensus 63 ~~i~~~a~~vr~~~-~~vV~IGIGGS~LGp~~v~eaL~~~~~~~~~~~~~~fv~dnvDp~~i~~~l~~l~~~~Tl~iViS 141 (446)
T 3ff1_A 63 SRIVEASKRIKENS-DVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVIS 141 (446)
T ss_dssp HHHHHHHHHHHHHC-SEEEEECCGGGTHHHHHHHHHHSCSSCCCCSSCEEEEESSSCCHHHHHHHHHHGGGCCEEEEEEC
T ss_pred HHHHHHHHHHhcCC-CEEEEEecchhHHHHHHHHHHHcchhhcccCCceEEEEecCCCHHHHHHHHHhcCccceEEEEEc
Confidence 457777777764 5 5899999999998888877777653 45676664 4445555555554 567899999
Q ss_pred CCCCcHHHHHHHHHHHH----c-C-----CeEEEEeCCCCCccccccC----EEEEcCCC
Q 019775 110 KSGNTEELLKVVPCAKA----K-G-----AYLVSVTSVEGNALAAVCD----MNVHLPVE 155 (336)
Q Consensus 110 ~sG~~~~~~~~~~~ak~----~-g-----~~vi~IT~~~~s~l~~~ad----~~i~~~~~ 155 (336)
.||.|.|+....+.+|+ + | .++|++|++..++|.+.|+ -+|.++..
T Consensus 142 KSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vavT~~~~g~L~~~a~~~G~~~F~~~d~ 201 (446)
T 3ff1_A 142 KSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDD 201 (446)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEEECSSCSHHHHHHHHHTCEEEECCTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEEeCCCcchhhhHHHHcCCeEEEeccc
Confidence 99999999999887764 2 4 3699999987788877764 25666554
No 181
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.59 E-value=3.4e-05 Score=73.57 Aligned_cols=57 Identities=26% Similarity=0.395 Sum_probs=52.6
Q ss_pred hhhHhhhcCCCCeeeCCC-ccHHHHHHHhcCCCCCccEeEEEe-CCCcEEEEEehhhHhhc
Q 019775 276 KLTVGEMCNRSPRTIGPD-AMAVEAMQKMESPPSPVQFLPVIN-RQNILIGIVTLHGLVSA 334 (336)
Q Consensus 276 ~~~i~~~~~~~~~~v~~~-~~l~~~~~~~~~~~~~~~~l~Vv~-~~~~~iGiit~~di~~~ 334 (336)
..++.++|.+++.++.++ +++.++++.|.++ +...+||+| ++|+++|+||..||++.
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~--~~~~lpVvd~~~g~lvGiVt~~Dll~~ 441 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKH--RVDQLPVVDQDDGSVLGVVGQETLITQ 441 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHH--TCSEEEEECTTTCCEEEEEEHHHHHHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHc--CCCeEEEEECCCCEEEEEEEHHHHHHH
Confidence 467999999999999999 9999999999999 999999999 67999999999999853
No 182
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.43 E-value=0.00031 Score=66.20 Aligned_cols=54 Identities=20% Similarity=0.275 Sum_probs=47.8
Q ss_pred hhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeCCCcEEEEEehhhHh
Q 019775 277 LTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINRQNILIGIVTLHGLV 332 (336)
Q Consensus 277 ~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~~~~~iGiit~~di~ 332 (336)
....++|.+++.++.+++++.++++.|.++ +...+||+|++++++|+||.+|+.
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~--~~s~~PVvd~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYH--GFAGFPVVTENNELVGIITGRDVR 142 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSS--CCCEEEEECSSSBEEEEEEHHHHT
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHc--CCcEEEEEccCCEEEEEEEHHHHh
Confidence 345667888899999999999999999999 999999999889999999999997
No 183
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.43 E-value=9.7e-05 Score=71.94 Aligned_cols=55 Identities=13% Similarity=0.023 Sum_probs=48.4
Q ss_pred hhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHH
Q 019775 210 KVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTL 267 (336)
Q Consensus 210 ~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~ 267 (336)
+++++|.+++ +++++++++.++.+.|.+++.+.+||+ ++|+++|+||++|+.+.+
T Consensus 569 ~v~~iMt~~p--itV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 569 SLVVPCDVSP--IVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGY 623 (632)
T ss_dssp --CCSCCCCC--CEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECC
T ss_pred ccchhhcCCC--ceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHH
Confidence 5889999985 499999999999999999999999999 689999999999987643
No 184
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.29 E-value=0.00044 Score=65.29 Aligned_cols=59 Identities=17% Similarity=0.168 Sum_probs=53.6
Q ss_pred hhhhhcccc-CCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 209 FKVQDVMKP-QKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 209 ~~v~~im~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
.+++++|.+ . +++++++.++.++++.|.+++...+||+|++|+++|++|.+|+...+..
T Consensus 152 ~~v~~im~~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 152 APISEHMTSEH--LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp SBTTTSCCCSC--CCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CcHHHHcCCCC--CEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 478899997 4 4589999999999999999999999999999999999999999998763
No 185
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.19 E-value=5.3e-05 Score=71.34 Aligned_cols=62 Identities=24% Similarity=0.335 Sum_probs=0.0
Q ss_pred hhhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 207 LIFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 207 ~~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
...+++++|.+..++++++++.++.+++++|.+++...+||+|++|+++|+||.+|+++...
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 34578999995322568999999999999999999999999999999999999999998754
No 186
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.10 E-value=7.5e-05 Score=69.53 Aligned_cols=59 Identities=17% Similarity=0.175 Sum_probs=0.0
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
..+|+++|.++ +++++.+.+++++.++|.+++...+||+|++++++|+||.+|+.+...
T Consensus 199 ~~~V~evMT~~--lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 199 ETPIKSVMTTE--VVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred ceEhhhhcccc--eEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 35789999986 679999999999999999999999999999999999999999987553
No 187
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.09 E-value=0.00016 Score=68.30 Aligned_cols=62 Identities=19% Similarity=0.253 Sum_probs=5.3
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHHh
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKA 269 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~~ 269 (336)
..+++++|.+...+++++++.++.+++++|.+++...+||+|++|+++|+||..|++..+..
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -------------------------------------------------------CHHHHTC
T ss_pred CCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 35789999972225689999999999999999999999999999999999999999998753
No 188
>4em6_D Glucose-6-phosphate isomerase; GPI, phosphoglucose isomerase phosphohexose isomerase, PHI, ssgcid; 1.90A {Brucella melitensis BV}
Probab=96.94 E-value=0.0029 Score=59.59 Aligned_cols=98 Identities=16% Similarity=0.204 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHcC---------CCeEEEEeccchHHHHHHHHHHHHhc--CCeeeecC--CccccccccCCCCC-CcEEE
Q 019775 41 PHTLTFTQTLLKC---------RGTIFFTGVGKSGFVANKISQTLISL--GIKSGFLN--PLDALHGDIGILSS-DDILV 106 (336)
Q Consensus 41 ~~i~~~~~~i~~a---------~~~I~i~G~G~s~~~a~~~~~~l~~~--g~~~~~~~--~~~~~~~~~~~~~~-~dlvi 106 (336)
+.++++++.+.+. =+.|.++|.|.|+.=...+...|... +.+++++. +...+...+..+++ +.++|
T Consensus 128 ~~i~~fa~~vrsg~~~g~tg~~i~~vV~IGIGGS~LGp~~v~eAL~~~~~~~~~~Fv~NvDp~~l~~~L~~l~~~~TLfi 207 (553)
T 4em6_D 128 DRMAAFADGIRSGALKGATGRKITDIVNIGIGGSDLGPVMATLALAPYHDEPRAHFVSNIDGAHIADTLSPLDPASTLII 207 (553)
T ss_dssp HHHHHHHHHHHHTSSBCTTSCBCCEEEEECCGGGTHHHHHHHHHTGGGCCSSEEEEECCSSHHHHHHHHTTSCGGGEEEE
T ss_pred HHHHHHHHHHHcCCcccCCCCceeeEEEEecccccHHHHHHHHHHhccCCCCeEEEEeCCCHHHHHHHHhhCCcCcEEEE
Confidence 4677788887652 05899999999998777777777643 67777776 34445555555654 56788
Q ss_pred EEeCCCCcHHHHHHHHHHHH----c------CCeEEEEeCCC
Q 019775 107 MFSKSGNTEELLKVVPCAKA----K------GAYLVSVTSVE 138 (336)
Q Consensus 107 ~iS~sG~~~~~~~~~~~ak~----~------g~~vi~IT~~~ 138 (336)
++|.||.|.|+...++.+++ + +-++|+||.+.
T Consensus 208 ViSKSgtT~ET~~n~~~ar~wl~~~~~~~~~~kh~vAvTt~~ 249 (553)
T 4em6_D 208 VASKTFTTIETMTNAQTARKWVADTLGEAAVGAHFAAVSTAL 249 (553)
T ss_dssp EECSSSCCHHHHHHHHHHHHHHHHHHCGGGGGGTEEEECSCH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhcCcccccCeEEEEcCCc
Confidence 99999999999987776653 1 24699999764
No 189
>3ljk_A Glucose-6-phosphate isomerase; structural genomics, IDP02733, cytoplasm, gluconeogenesis, glycolysis; HET: MSE MES; 1.48A {Francisella tularensis} PDB: 3m5p_A* 3q7i_A* 3q88_A*
Probab=96.92 E-value=0.0032 Score=59.14 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHcC---------CCeEEEEeccchHHHHHHHHHHHHhc---CCeeeecC--CccccccccCCCCC-CcEE
Q 019775 41 PHTLTFTQTLLKC---------RGTIFFTGVGKSGFVANKISQTLISL---GIKSGFLN--PLDALHGDIGILSS-DDIL 105 (336)
Q Consensus 41 ~~i~~~~~~i~~a---------~~~I~i~G~G~s~~~a~~~~~~l~~~---g~~~~~~~--~~~~~~~~~~~~~~-~dlv 105 (336)
+.++++++.+.+. =+.|.++|.|.|+.=...+...|... +.+++++. +...+...+..+++ +.++
T Consensus 118 ~~m~~fa~~vrsg~~~g~tg~~i~~VV~IGIGGS~LGp~~v~eaL~~~~~~~~~~~Fv~NvDp~~l~~~L~~l~~~~TLf 197 (543)
T 3ljk_A 118 QRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQPYHCTDLKVHFVSNVDADSLLQALHVVDPETTLL 197 (543)
T ss_dssp HHHHHHHHHHHTTCSBCTTSCBCCEEEEECCGGGTHHHHHHHHHTGGGCCSSCEEEEECCSSHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHHcCCcccCCCCceeeEEEEecccchHHHHHHHHHhhhhccCCCeEEEEeCCCHHHHHHHHhhCCcccEEE
Confidence 5677888888752 05899999999998777777777643 67788876 34445555555655 5678
Q ss_pred EEEeCCCCcHHHHHHHHHHHH----c-------CCeEEEEeCCC
Q 019775 106 VMFSKSGNTEELLKVVPCAKA----K-------GAYLVSVTSVE 138 (336)
Q Consensus 106 i~iS~sG~~~~~~~~~~~ak~----~-------g~~vi~IT~~~ 138 (336)
|++|.||.|.|+...++.+++ + .-++|+||.+.
T Consensus 198 iViSKSgtT~ET~~n~~~ar~wl~~~~g~~~~~~khfvAvTt~~ 241 (543)
T 3ljk_A 198 IIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKL 241 (543)
T ss_dssp EEECTTSCCHHHHHHHHHHHHHHHHHHCCGGGGGGTEEEECSCH
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhcCCcccccCeEEEEcCCh
Confidence 899999999999988776663 2 23589999864
No 190
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.90 E-value=0.00015 Score=68.30 Aligned_cols=59 Identities=24% Similarity=0.211 Sum_probs=0.4
Q ss_pred hhhhhhccccCCCCccccCCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEeeHHHHHHHHH
Q 019775 208 IFKVQDVMKPQKELPVCKEGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLK 268 (336)
Q Consensus 208 ~~~v~~im~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it~~dl~~~~~ 268 (336)
..+++++|.++ +++++++.++.++++.|.+++...+||+|++|+++|++|.+|++....
T Consensus 149 ~~~v~~im~~~--~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 149 GKLVKELMTKE--VITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ------------------------------------------------------------C
T ss_pred CCCHHHHccCC--CeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 45789999875 458999999999999999999999999999999999999999998754
No 191
>3ujh_A Glucose-6-phosphate isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: G6Q; 2.10A {Toxoplasma gondii}
Probab=96.89 E-value=0.004 Score=58.82 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHcCC---------CeEEEEeccchHHHHHHHHHHHHh--------cCCeeeecC--CccccccccCCCCC
Q 019775 41 PHTLTFTQTLLKCR---------GTIFFTGVGKSGFVANKISQTLIS--------LGIKSGFLN--PLDALHGDIGILSS 101 (336)
Q Consensus 41 ~~i~~~~~~i~~a~---------~~I~i~G~G~s~~~a~~~~~~l~~--------~g~~~~~~~--~~~~~~~~~~~~~~ 101 (336)
+.++++++.+.+.. +.|.++|.|.|+.=...+...|.. -+.+++++. +...+...+..+++
T Consensus 129 ~~i~~fa~~vrsg~~~g~tg~~i~~vV~IGIGGS~LGp~~v~eAL~~~~~~~~~~~~~~~~FvsNvDp~~l~~~L~~L~~ 208 (567)
T 3ujh_A 129 RRIRVFSEKVRSGEIRGHTGKKLVNVISIGIGGSYLGTEFVHLALAAEGYAAEKAHGRQIHFLANVDPVDVWLAERGFDP 208 (567)
T ss_dssp HHHHHHHHHHHHTSSBCTTSCBCCEEEEECCGGGTHHHHHHHHHHHTCHHHHHHTTTCEEEEECCSSHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHcCCcccCCCCcceeEEEEecccchHHHHHHHHHhccccccccccCCCeEEEEeCCCHHHHHHHHhhCCc
Confidence 46777778776431 589999999999766666666653 467888877 44555555666655
Q ss_pred -CcEEEEEeCCCCcHHHHHHHHHHHH----cC--------CeEEEEeCCC
Q 019775 102 -DDILVMFSKSGNTEELLKVVPCAKA----KG--------AYLVSVTSVE 138 (336)
Q Consensus 102 -~dlvi~iS~sG~~~~~~~~~~~ak~----~g--------~~vi~IT~~~ 138 (336)
+.++|++|.||.|.|+....+.+|+ +. -++|+||++.
T Consensus 209 ~~TlfiViSKSgtT~ET~~n~~~~r~wl~~~~~~g~~~~~kh~vAvT~~~ 258 (567)
T 3ujh_A 209 EETLVVVISKTFTTAETMMNARSVRDWYLHHYKGDERALGAHFCAVSTNL 258 (567)
T ss_dssp GGEEEEEECSSSCCHHHHHHHHHHHHHHHHHTTTCGGGSGGGEEEECSCH
T ss_pred ccEEEEEEeCCCCCHHHHHHHHHHHHHHHHhccccchhhcCeEEEECCCh
Confidence 4578889999999999888877663 21 2599999754
No 192
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=96.78 E-value=0.0089 Score=52.48 Aligned_cols=118 Identities=10% Similarity=-0.003 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccccccccCCCCCCcEEEEEeC-CCC--cHH
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDALHGDIGILSSDDILVMFSK-SGN--TEE 116 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~-sG~--~~~ 116 (336)
+..+++++.+ . ++++++|.|..+.+|.+.+.+|.+. ..++......+..+.....+++ .+|++.- .+. ...
T Consensus 169 ~~~~~la~~~-~--~~~~~lG~g~~~~~A~e~alkl~E~~~~~a~~~~~~e~~HGp~~~i~~--~vi~~~~~~~~~~~~~ 243 (302)
T 1tzb_A 169 ALIHKLVEEF-Q--KRPTIIAAESMRGVAYRVKNEFNENAKIEPSVEILPEAHHNWIEGSER--AVVALTSPHIPKEHQE 243 (302)
T ss_dssp HHHHHHHHHH-T--TCCEEEEEGGGHHHHHHHHHHHHHTTCCCCEEEEETGGGGTHHHHCCS--CEEEEECSSSCHHHHH
T ss_pred hHHHHHHHHh-C--CeEEEEeCCcchHHHHHHHHHHHHhcCcceeccccchhcccceEEecc--cEEEEECCCccHHHHH
Confidence 5677788888 4 4899999999999999999999987 5555556556666666666766 4555543 444 245
Q ss_pred HHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHH
Q 019775 117 LLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 117 ~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
..+.++..+ |++++.|+... . ..++....++++...+...++.++++
T Consensus 244 ~~~~~~e~~--g~~v~~i~~~~------------------~----------~~l~~~~~~q~la~~~A~~~G~dpd~ 290 (302)
T 1tzb_A 244 RVKATVEIV--GGSIYAVEMHP------------------K----------GVLSFLRDVGIASVKLAEIRGVNPLA 290 (302)
T ss_dssp HHHHHHHHH--CCEEEECCCSH------------------H----------HHHHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHHh--CceEEEEEcCC------------------C----------CcchhhHHHHHHHHHHHHHhCcCCCC
Confidence 666677777 99999998642 0 01225677888888888887765543
No 193
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.70 E-value=0.00057 Score=64.87 Aligned_cols=67 Identities=13% Similarity=0.142 Sum_probs=34.3
Q ss_pred eHHHHHHHHHhcCCchhhhhHhhhcCCCCeeeCCCccHHHHHHHhcCCCCCccEeEEEeC---CCcEEEEEehhhHhh
Q 019775 259 TDGDLRRTLKASGEGIFKLTVGEMCNRSPRTIGPDAMAVEAMQKMESPPSPVQFLPVINR---QNILIGIVTLHGLVS 333 (336)
Q Consensus 259 t~~dl~~~~~~~~~~~~~~~i~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~l~Vv~~---~~~~iGiit~~di~~ 333 (336)
+.+++...+.. -..+.++|.+++.++.+++++.++++.|.++ +...+||+|+ +|+++|+||..|+.+
T Consensus 96 t~e~~~~~v~~------v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~--~~~~~pVvd~~~~~~~lvGiVt~~Dl~~ 165 (514)
T 1jcn_A 96 TPEFQANEVRK------VKNFEQGFITDPVVLSPSHTVGDVLEAKMRH--GFSGIPITETGTMGSKLVGIVTSRDIDF 165 (514)
T ss_dssp CHHHHHHHHHH------HHTCCTTSCSSCCCCCC-------------------CEESCC--------CCEECTTTTC-
T ss_pred CHHHHHHHHHh------hhhhhhccccCCEEECCCCCHHHHHHHHHhc--CCCEEEEEeCCCcCCEEEEEEEHHHHHh
Confidence 56666654432 2356678888899999999999999999999 8999999987 589999999999865
No 194
>3qki_A Glucose-6-phosphate isomerase; structural genomics, structural genomics consortium, SGC; 1.92A {Plasmodium falciparum} PDB: 3pr3_A
Probab=96.51 E-value=0.013 Score=55.67 Aligned_cols=98 Identities=16% Similarity=0.218 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHcCC---------CeEEEEeccchHHHHHHHHHHHHhc--------C-----------------Ceeeec
Q 019775 41 PHTLTFTQTLLKCR---------GTIFFTGVGKSGFVANKISQTLISL--------G-----------------IKSGFL 86 (336)
Q Consensus 41 ~~i~~~~~~i~~a~---------~~I~i~G~G~s~~~a~~~~~~l~~~--------g-----------------~~~~~~ 86 (336)
+.++++++.+.+.. +.|..+|.|.|+.=...+...|... + .+++++
T Consensus 144 ~~i~~fa~~vr~g~~~g~tgk~~~~vV~IGIGGS~LGp~~v~eAL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fv 223 (597)
T 3qki_A 144 KKIEKYSDDIRNGVIKTCKNTKFKNVICIGIGGSYLGTEFVYEAMKYYYYNMELNKNEKDQVNNFNNNYDQDNVFNVRFL 223 (597)
T ss_dssp HHHHHHHHHHHTTSSCCTTSSCCCEEEEECCGGGTHHHHHHHHHHHHHHHHHTTSCCCTTCCCCTTCCCSSTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCcccCCCCcceeEEEEecccccHHHHHHHHHhccchhcccccccccccccccccccccccCceEEEE
Confidence 46777888876531 5899999999996555555544421 2 237777
Q ss_pred C--CccccccccCCCCC-CcEEEEEeCCCCcHHHHHHHHHHHH----c-C------CeEEEEeCCC
Q 019775 87 N--PLDALHGDIGILSS-DDILVMFSKSGNTEELLKVVPCAKA----K-G------AYLVSVTSVE 138 (336)
Q Consensus 87 ~--~~~~~~~~~~~~~~-~dlvi~iS~sG~~~~~~~~~~~ak~----~-g------~~vi~IT~~~ 138 (336)
. |...+...+..+++ +.++|++|.||.|.|+....+.+|+ + | -.+|+||++.
T Consensus 224 sNvDp~~l~~~L~~Ld~~~TLfiViSKSgtT~ET~~n~~~~r~wl~~~~g~~~~~~kh~vAvT~~~ 289 (597)
T 3qki_A 224 ANVDPNDVNRAIQNLDQYDTLVIIISKTFTTAETMLNARSIKKWLSLKIKDDENLSKHMVAVSTNL 289 (597)
T ss_dssp CCSSHHHHHHHHTTCCGGGEEEEEECSSSCCHHHHHHHHHHHHHHTTTCCSHHHHGGGEEEECSCH
T ss_pred eCCCHHHHHHHHhhCCcccEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcccccCeEEEECCCh
Confidence 6 45556666666665 4578888999999999998777765 2 3 2599999864
No 195
>3hjb_A Glucose-6-phosphate isomerase; PGI, IDP01329, gluconeogenesi glycolysis, structural genomics, center for STRU genomics of infectious diseases; HET: PG4; 1.50A {Vibrio cholerae} PDB: 3nbu_A
Probab=96.24 E-value=0.013 Score=55.25 Aligned_cols=98 Identities=12% Similarity=0.240 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHcCC---------CeEEEEeccchHHHHHHHHHHHHhc--CCeeeecC--CccccccccCCCCC-CcEEE
Q 019775 41 PHTLTFTQTLLKCR---------GTIFFTGVGKSGFVANKISQTLISL--GIKSGFLN--PLDALHGDIGILSS-DDILV 106 (336)
Q Consensus 41 ~~i~~~~~~i~~a~---------~~I~i~G~G~s~~~a~~~~~~l~~~--g~~~~~~~--~~~~~~~~~~~~~~-~dlvi 106 (336)
+.++++++.+.+.. +.|.++|.|.|+.=...+...|... +.+++++. +...+...+..+++ +.++|
T Consensus 150 ~~i~~fa~~vrsg~~~g~tg~~i~~VV~IGIGGS~LGp~~v~eAL~~~~~~~~l~FvsNvDp~~l~~~L~~Ld~~~TLfi 229 (574)
T 3hjb_A 150 AKMKAFSERVIGGEWKGFTGKAITDVVNIGIGGSDLGPYMVTEALVPYKNHLTVHFVSNVDGTHMAETLKNVDPETTLFL 229 (574)
T ss_dssp HHHHHHHHHHHHTCSBCTTSCBCCEEEEECCGGGTHHHHHHHHHTGGGCCSCEEEEECCSSHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHcCCcccCCCCCCCeEEEEecccchHHHHHHHHHhhcccCCCeEEEEeCCCHHHHHHHHhcCCcccEEEE
Confidence 46778888876521 4899999999998777777777644 67787776 34445555666655 46788
Q ss_pred EEeCCCCcHHHHHHHHHHHH----c-C------CeEEEEeCCC
Q 019775 107 MFSKSGNTEELLKVVPCAKA----K-G------AYLVSVTSVE 138 (336)
Q Consensus 107 ~iS~sG~~~~~~~~~~~ak~----~-g------~~vi~IT~~~ 138 (336)
++|.||.|.|+...++.+|+ + | -..|+||.+.
T Consensus 230 ViSKSgtT~ET~~n~~~ar~wl~~~~~~~~~~~khfVavTt~~ 272 (574)
T 3hjb_A 230 VASKTFTTQETMTNAHTARDWFLKAAGDEAHVAKHFAALSTNG 272 (574)
T ss_dssp EECSSSCCHHHHHHHHHHHHHHHHHHCSGGGGGGTEEEESSCH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHhcCCcchhcCEEEEEcCCh
Confidence 89999999999887765542 2 2 3589999763
No 196
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=96.20 E-value=0.048 Score=46.90 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=69.4
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCCeeeecC--CccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeE
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGIKSGFLN--PLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~v 131 (336)
++|.|+|+.... .+...++.+ .|...+.-. ++..-......+...|++|++....+ ..+++.|++.|++|
T Consensus 72 ~~ILfVgTk~~aq~~V~k~A~~---~g~~yv~~RWlgG~LTN~~t~~f~~PdlliV~Dp~~e----~~AI~EA~~lgIPv 144 (295)
T 2zkq_b 72 ADVSVISSRNTGQRAVLKFAAA---TGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRAD----HQPLTEASYVNLPT 144 (295)
T ss_dssp GGEEEEECSHHHHHHHHHHHHH---HCCEEEESSCCCC-CCCTTCSSCCCCSEEEESCTTTT----HHHHHHHHHHTCCE
T ss_pred CeEEEEeCcHHHHHHHHHHHHH---hCCceecceEecccccCcccccccCCCeEEEeCCCcc----hhHHHHHHHhCCCE
Confidence 589999987543 233333333 343332211 11111111234567899888865443 45678899999999
Q ss_pred EEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 132 VSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 132 i~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
|+|.+. +++. ++.|+.|.+... |.-+.-+++.+|...+.+.++
T Consensus 145 IalvDT-n~dp-~~VDy~IP~Ndd------------s~~SI~Li~~lla~aIl~~rg 187 (295)
T 2zkq_b 145 IALCNT-DSPL-RYVDIAIPCNNK------------GAHSVGLMWWMLAREVLRMRG 187 (295)
T ss_dssp EEEECT-TCCC-TTCSEEEESCSS------------CHHHHHHHHHHHHHHHHHCCS
T ss_pred EEEecC-CCCc-ccCCEEEeCCCC------------ccchHHHHHHHHHHHHHHhcC
Confidence 999986 4554 678988777554 335556777888777776654
No 197
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=95.98 E-value=0.075 Score=44.67 Aligned_cols=124 Identities=10% Similarity=0.053 Sum_probs=73.1
Q ss_pred HHHHHHHHHH---cCCCeEEEEeccchH-HHHHHHHHHHHhcCCeee---ecCCccccccccCCCCCCcEEEEEeCCCCc
Q 019775 42 HTLTFTQTLL---KCRGTIFFTGVGKSG-FVANKISQTLISLGIKSG---FLNPLDALHGDIGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 42 ~i~~~~~~i~---~a~~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~---~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~ 114 (336)
.+..+++.+. +. ++|.|+|+.... .+...++.+ .|...+ +++ +..--.........|++|++....+
T Consensus 90 ~L~~A~~~i~~~~~~-~~iLfVgTk~~aq~~V~~~A~~---~g~~yv~~RWlg-G~LTN~~~~~f~~PdlliV~Dp~~e- 163 (253)
T 3bch_A 90 KLLLAARAIVAIENP-ADVSVISSRNTGQRAVLKFAAA---TGATPIAGRFTP-GTFTNQIQAAFREPRLLVVTDPRAD- 163 (253)
T ss_dssp HHHHHHHHHHTCSSG-GGEEEEECSHHHHHHHHHHHHH---HCCEEEESCCCT-TTTTCCSCSTTCSCSEEEESCTTTT-
T ss_pred HHHHHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHH---hCCeeecceecC-CcccCccccccCCCCEEEEECCCcc-
Confidence 3445555553 33 589999987643 333333333 343332 222 1111111234567889888865433
Q ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 115 EELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
..+++.|...|++||+|.+. +++. .+.|+.|.+... +.-+.-+++.+|...+.+.++
T Consensus 164 ---~~AI~EA~~lgIPvIalvDT-n~dp-~~VDy~IP~Ndd------------s~~SI~Li~~lla~aIl~grg 220 (253)
T 3bch_A 164 ---HQPLTEASYVNLPTIALCNT-DSPL-RYVDIAIPCNNK------------GAHSVGLMWWMLAREVLRMRG 220 (253)
T ss_dssp ---HHHHHHHHHTTCCEEEEECT-TCCC-TTCSEEEESCCS------------SHHHHHHHHHHHHHHHHHHHT
T ss_pred ---chHHHHHHHhCCCEEEEEcC-CCCc-ccCceEeecCCc------------chhhHHHHHHHHHHHHHHhcC
Confidence 45678899999999999986 4444 578888776543 334456666777766666544
No 198
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=95.81 E-value=0.19 Score=41.11 Aligned_cols=124 Identities=12% Similarity=0.063 Sum_probs=73.6
Q ss_pred HHHHHHHHHH--cCCCeEEEEeccchH-HHHHHHHHHHHhcCCeee---ecCCccccccccCCCCCCcEEEEEeCCCCcH
Q 019775 42 HTLTFTQTLL--KCRGTIFFTGVGKSG-FVANKISQTLISLGIKSG---FLNPLDALHGDIGILSSDDILVMFSKSGNTE 115 (336)
Q Consensus 42 ~i~~~~~~i~--~a~~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~---~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~ 115 (336)
.+.++++.+. +. ++|.++|+.... .+...++.+- |...+ +++ +..--.........|++|++....+
T Consensus 55 ~L~~A~~~i~~i~~-~~iLfVgTk~~~~~~V~~~A~~~---g~~~v~~rwlg-G~LTN~~~~~f~~PdlliV~Dp~~e-- 127 (208)
T 1vi6_A 55 RIRVAAKFLSRYEP-SKILLVAARQYAHKPVQMFSKVV---GSDYIVGRFIP-GTLTNPMLSEYREPEVVFVNDPAID-- 127 (208)
T ss_dssp HHHHHHHHHTTSCG-GGEEEEECSGGGHHHHHHHHHHH---CCEEEESSCCT-TTTTCTTSTTCCCCSEEEESCTTTT--
T ss_pred HHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHHHHHh---CCeeecCEECC-CcccChhhHhhCCCCEEEEECCCcc--
Confidence 3445555554 34 589999987543 3333444433 33332 222 1111111334567888888865433
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
..++++|...|++||++.+. +++. .+.|+.|.+... +.-+.-+++.+|...+.+.++
T Consensus 128 --~~ai~EA~~l~IPvIalvDT-n~~p-~~Vd~~IP~Ndd------------s~~SI~Li~~~la~ail~grg 184 (208)
T 1vi6_A 128 --KQAVSEATAVGIPVVALCDS-NNSS-ADVDLVIPTNNK------------GRRALAIVYWLLAREIAKIRG 184 (208)
T ss_dssp --HHHHHHHHHTTCCEEEEECT-TCCC-TTCSEEEESCCS------------CHHHHHHHHHHHHHHHHHHHT
T ss_pred --hhHHHHHHHhCCCEEEEeCC-CCCc-cccCEEEeCCCC------------chhHHHHHHHHHHHHHHHHhC
Confidence 35677888999999999986 5554 578988776543 334445666777666666554
No 199
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.75 E-value=0.22 Score=42.79 Aligned_cols=118 Identities=8% Similarity=-0.021 Sum_probs=69.7
Q ss_pred HcCCCeEEEEeccchH-HHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCC
Q 019775 51 LKCRGTIFFTGVGKSG-FVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGA 129 (336)
Q Consensus 51 ~~a~~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~ 129 (336)
.+. .+|.|+|+.... .+...++.+-...-++-..++ +..-..........|++|++....+ ..+++.|...|+
T Consensus 73 ~~~-~~ILfVgTk~~aq~aV~k~A~~tG~~yV~~RWlg-GtLTN~~t~~f~ePdllvV~Dp~~d----~qAI~EA~~lnI 146 (305)
T 3iz6_A 73 ENP-QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP-GTFTNQLQTSFSEPRLLILTDPRTD----HQPIKESALGNI 146 (305)
T ss_dssp TSS-CCEEEECCSHHHHHHHHHHHHHHTCEEECSCCCT-TTTTTTTTSCSSCCSEEEESCTTTT----HHHHHHHHHHTC
T ss_pred hCC-CeEEEEeCcHHHHHHHHHHHHHhCCccccCcccC-CcccCcccccccCCceeEEeCcccc----hHHHHHHHHcCC
Confidence 344 589999987643 333344444322111111222 1111111234578899998875444 455678888999
Q ss_pred eEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 130 YLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 130 ~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
+||+|++. ++++ .+.|+.|.+..... -+.-+++.+|...+...++
T Consensus 147 PtIALvDT-nsdp-~~VDy~IP~NDds~------------rSI~Li~~lLA~aVl~~rg 191 (305)
T 3iz6_A 147 PTIAFCDT-DSPM-RYVDIGIPANNKGK------------QSIGCLFWLLARMVLQMRG 191 (305)
T ss_dssp CEEEEECT-TSCG-GGCSEEEESCCSST------------HHHHHHHHHHHHHHHHTTS
T ss_pred CEEEEEcC-CCCc-cccceEEeCCCCCc------------cHHHHHHHHHHHHHHHhcC
Confidence 99999986 5554 56899887755422 3445667777777776654
No 200
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=95.43 E-value=0.4 Score=38.96 Aligned_cols=114 Identities=15% Similarity=0.145 Sum_probs=68.6
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCCeeeecCC-ccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGIKSGFLNP-LDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
.+|.++|+.... .+...++.+-...-..-.++++ .+.+ ........|++|++....+ ..+++.|...|+++|
T Consensus 65 ~~ilfV~tk~~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~--~~~~~~~Pdllvv~Dp~~d----~~ai~EA~~l~IP~I 138 (202)
T 3j20_B 65 QSILAVSVRLYGQKPVKKFGEVTGARAIPGRFLPGTMTNP--AVKNFFEPDVLIVTDPRAD----HQAMREAVEIGIPIV 138 (202)
T ss_dssp SCEEEECCCTTTHHHHHHHHHHHSCCCCCSSCCSSSSSCS--SSSSCCCCSEEEESCTTTS----HHHHHHHHHHTCCEE
T ss_pred CeEEEEecChHHHHHHHHHHHHHCCceeCceecCCCcccH--hHHhccCCCeEEEeCCccc----hHHHHHHHHcCCCEE
Confidence 589999997643 4444455544433322233332 1111 1233457888888865443 456778889999999
Q ss_pred EEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 133 SVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 133 ~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
++.+. +++. .+.|+.|.+... +.-+.-+++.+|...+.+.++
T Consensus 139 al~DT-n~~p-~~Vd~~IP~Ndd------------s~~Si~Li~~~la~avl~~rg 180 (202)
T 3j20_B 139 ALVDT-ENLL-SYVDLAIPTNNK------------GRKALALIYWILAREILYNRG 180 (202)
T ss_dssp EEECT-TCCC-TTCCEEEECCCS------------SHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcC-CCCc-cccCEEEeCCCC------------cHHHHHHHHHHHHHHHHHhcC
Confidence 99986 4554 568888776543 223445566666666666554
No 201
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=95.24 E-value=0.21 Score=41.75 Aligned_cols=115 Identities=11% Similarity=0.012 Sum_probs=65.9
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCC-eeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGI-KSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
++|.|+|+.... .+...++.+-...-. +-..+++ ..--.........|++|++.... -..+++.|...|++||
T Consensus 67 ~~iLfVgtk~~~~~~V~~~A~~~g~~yv~~~RWlgG-~LTN~~t~~~~~PdlliV~Dp~~----e~~ai~EA~~l~IPvI 141 (241)
T 2xzm_B 67 EDVMVVCSRIYGQRAAIKFAGYTHCKSTSSSRWTPG-TLTNYQTLKYEEPRVLIVTDPRS----DFQAIKEASYVNIPVI 141 (241)
T ss_dssp GGEEEECCSHHHHHHHHHHHHHHTCBCCCCSSCCTT-TTTCTTCTTCCCCSEEEESCTTT----THHHHHHHTTTTCCEE
T ss_pred CeEEEEECCHHHHHHHHHHHHHhCCEEeccccccCC-cccCccccccCCCCEEEEECCCc----chHHHHHHHHhCCCEE
Confidence 589999987543 333334433332222 2223322 11111123456788888886442 2456778899999999
Q ss_pred EEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 133 SVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 133 ~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
++.+. +++. .+.|+.|.+ +.. |.-+.-+++.+|...+...++
T Consensus 142 alvDT-n~~p-~~VDy~IP~--Ndd----------s~~SI~Li~~~la~ail~~rg 183 (241)
T 2xzm_B 142 ALCDS-DSPL-AYVDVVIPC--NNR----------STESISMIYWMIAREVKILRG 183 (241)
T ss_dssp ECCCS-SSCC-TTCCEECCS--CCS----------SHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecC-CCCc-ccccEEEeC--CCc----------ccchHHHHHHHHHHHHHHhhC
Confidence 99986 5554 467777554 433 334456666666666665543
No 202
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=94.79 E-value=0.51 Score=39.58 Aligned_cols=125 Identities=7% Similarity=0.004 Sum_probs=73.0
Q ss_pred HHHHHHHHHH---cCCCeEEEEeccchH-HHHHHHHHHHHhcCCeeeecC--CccccccccCCCCCCcEEEEEeCCCCcH
Q 019775 42 HTLTFTQTLL---KCRGTIFFTGVGKSG-FVANKISQTLISLGIKSGFLN--PLDALHGDIGILSSDDILVMFSKSGNTE 115 (336)
Q Consensus 42 ~i~~~~~~i~---~a~~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~~~dlvi~iS~sG~~~ 115 (336)
.+..+++.|. +. ++|.|+|+.... .+...++.+ .|...+.-. ++..-......+...|++|++....+
T Consensus 56 ~L~~A~~~i~~i~~~-~~vlfVgTk~~~q~~V~k~A~~---~g~~~v~~rwlgGtLTN~~t~~f~~PdllvV~Dp~~d-- 129 (252)
T 3u5c_A 56 KLVLAARIIAAIPNP-EDVVAISSRTFGQRAVLKFAAH---TGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSD-- 129 (252)
T ss_dssp HHHHHHHHHTTSSSG-GGEEEEECSHHHHHHHHHHHHH---SSCEEEESCCCTTSSSCTTSTTCCCCSEEEESCTTTT--
T ss_pred HHHHHHHHHHHHhcC-CEEEEEeCCcHHHHHHHHHHHH---hCCceecCcccCCcccChhhhhccCCceEEEeCCccc--
Confidence 3445555543 33 589999987533 233333333 343332211 22111111234567899998876544
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARN 188 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~ 188 (336)
..+++.|...|++||++.+. ++++ .+.|+.|.+..... -+.-+++.+|...+...++
T Consensus 130 --~~ai~EA~~l~IP~Ial~DT-n~~p-~~VD~~IP~Ndds~------------~SI~Li~~~La~aVl~~rg 186 (252)
T 3u5c_A 130 --AQAIKEASYVNIPVIALTDL-DSPS-EFVDVAIPCNNRGK------------HSIGLIWYLLAREVLRLRG 186 (252)
T ss_dssp --HHHHHHHHTTTCCEEEEECT-TCCC-TTCSSEEECCTTST------------THHHHHHHHHHHHHHSSSS
T ss_pred --hHHHHHHHHcCCCEEEEEcC-CCCc-ccCCEEEeCCCCCc------------chHHHHHHHHHHHHHHhcC
Confidence 45667888999999999986 5554 56899888755432 2334566667666666554
No 203
>1wiw_A Glucose-6-phosphate isomerase like protein; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.80.1.1
Probab=94.65 E-value=0.0078 Score=52.33 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=31.7
Q ss_pred CCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccC
Q 019775 97 GILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCD 147 (336)
Q Consensus 97 ~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad 147 (336)
.+.++.|++|+.| ++++|.++||++|+||+ ++++.+.|.
T Consensus 58 ~wvg~~dlvia~S----------a~~~A~rrGa~vv~vts--gG~L~~~a~ 96 (290)
T 1wiw_A 58 DWGEEGTLFLLEG----------GYDLGEAAGMALLAETG--RARVVRVGF 96 (290)
T ss_dssp SCCSSSEEEEEEC----------SSCTTSCSTTC--CCCT--TCEEEEEES
T ss_pred CccCCCCEEEEec----------HHHHHHHcCCeEEEECC--CChHHHHHh
Confidence 4578999999999 78899999999999997 558888764
No 204
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=93.41 E-value=0.27 Score=40.95 Aligned_cols=69 Identities=10% Similarity=0.169 Sum_probs=46.5
Q ss_pred CCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHH
Q 019775 101 SDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVA 180 (336)
Q Consensus 101 ~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~ 180 (336)
..|++|++....+ ..++++|+..|++||++.+. +++. .+.|+.|.. ... |.-+.-+++..+.
T Consensus 157 ~Pdll~v~Dp~~e----~~ai~EA~~l~IPvIaivDT-n~dp-~~Vdy~IP~--Ndd----------s~~si~li~~~la 218 (231)
T 3bbn_B 157 LPDIVIIVDQQEE----YTALRECITLGIPTICLIDT-NCNP-DLADISIPA--NDD----------AIASIRLILTKLV 218 (231)
T ss_dssp CCSEEEESCTTTT----HHHHHHHHTTTCCEEECCCS-SSCC-SSCSEECCC--CSS----------SHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccc----cHHHHHHHHhCCCEEEEecC-CCCc-cceeEEeeC--CCc----------cHHHHHHHHHHHH
Confidence 5788888764433 36778899999999999987 4443 467777554 433 3344556677777
Q ss_pred HHHHhhc
Q 019775 181 IAMMGAR 187 (336)
Q Consensus 181 ~~~~~~~ 187 (336)
..+.+-+
T Consensus 219 ~ai~~g~ 225 (231)
T 3bbn_B 219 FAICEGR 225 (231)
T ss_dssp HHHHHTS
T ss_pred HHHHHHH
Confidence 7666543
No 205
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=91.94 E-value=2.1 Score=42.02 Aligned_cols=115 Identities=11% Similarity=0.169 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHc------CCCeEEEEeccchHHHHHHHHHHHHh--cCCeeeecCCc----------------ccccccc
Q 019775 41 PHTLTFTQTLLK------CRGTIFFTGVGKSGFVANKISQTLIS--LGIKSGFLNPL----------------DALHGDI 96 (336)
Q Consensus 41 ~~i~~~~~~i~~------a~~~I~i~G~G~s~~~a~~~~~~l~~--~g~~~~~~~~~----------------~~~~~~~ 96 (336)
+.++.+++.+.+ . +.|.++|.|....-..++..+|.+ +|-+.+..... .......
T Consensus 83 eAl~~ia~~l~~~~~~~G~-~~i~~~~~~~~~~e~~~~~~~~~~~~~gs~n~~~~~~~c~~~~~~~~~~~~G~~~~~~~~ 161 (723)
T 2nap_A 83 EALDLMASRFRSSIDMYGP-NSVAWYGSGQCLTEESYVANKIFKGGFGTNNVDGNPRLCMASAVGGYVTSFGKDEPMGTY 161 (723)
T ss_dssp HHHHHHHHHHHHHHHHHCG-GGEEEEECTTSCHHHHHHHHHHHHHTSCCCCEEEGGGGTTHHHHHHHHHHHSSCSCSSCG
T ss_pred HHHHHHHHHHHHHHHhhCC-CeEEEEeCCcccchhhHHHHHHHHHhcCCCceeCCCccccchHhHHHHhccCCCCCCCCh
Confidence 345555555433 3 468888877554444455555554 55433221110 0001122
Q ss_pred CCCCCCcEEEEEeCCCC--cHHHHHHHHHHHHc--CCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 97 GILSSDDILVMFSKSGN--TEELLKVVPCAKAK--GAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 97 ~~~~~~dlvi~iS~sG~--~~~~~~~~~~ak~~--g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
..+..-|++|++..... .+....-+..++++ |+++|+|-.. .+..+..||..+.+..+++
T Consensus 162 ~d~~~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~-~t~ta~~Ad~~l~irPGtD 225 (723)
T 2nap_A 162 ADIDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPR-RTNTSRIADMHVAFRPGTD 225 (723)
T ss_dssp GGGGTCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSB-CCGGGGGCSEEECCCTTTH
T ss_pred hhHhHCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCc-CCchhhhhCeeeecCCCcH
Confidence 34567788888865422 23344556777887 9999999865 6677889999998876655
No 206
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=91.63 E-value=2.3 Score=41.67 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=43.4
Q ss_pred CCCCCcEEEEEeCCCC--cHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 98 ILSSDDILVMFSKSGN--TEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 98 ~~~~~dlvi~iS~sG~--~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
.+..-|++|++..... .+....-+..++++|+++|+|-.. .+..+..||..+.+..+++
T Consensus 163 di~~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD 223 (715)
T 2iv2_X 163 EIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPR-KIETARIADMHIALKNGSN 223 (715)
T ss_dssp GGGGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSS-CCHHHHTCSEEECCCTTCH
T ss_pred HHhcCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCC-CCchhHhhCEEeccCCCcH
Confidence 3556788888865322 234556677889999999999764 6677889999999877655
No 207
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=89.64 E-value=6.6 Score=39.10 Aligned_cols=126 Identities=10% Similarity=0.126 Sum_probs=72.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHh--cCCeeeecCCc----------------cccccccCCCCCCcEEEEEeCCC-Cc-
Q 019775 55 GTIFFTGVGKSGFVANKISQTLIS--LGIKSGFLNPL----------------DALHGDIGILSSDDILVMFSKSG-NT- 114 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~--~g~~~~~~~~~----------------~~~~~~~~~~~~~dlvi~iS~sG-~~- 114 (336)
+.|.++|.|....-..++..+|.+ +|-+.+-.... .........+..-|++|++.... .+
T Consensus 114 ~si~~~~sg~~~~e~~~~~~kl~~~~~gt~n~d~~~~~c~~~~~~~~~~~~G~~~~~~~~~d~~~ad~il~~G~N~~~~~ 193 (802)
T 3ml1_A 114 TAVGMFGSGQWTVWEGYAAAKLYKAGFRSNNIDPNARHCMASAAAGFMRTFGMDEPMGCYDDFEAADAFVLWGSNMAEMH 193 (802)
T ss_dssp GGEEEEECTTSCHHHHHHHHHHHHTTTCCCCEEEGGGGTTHHHHHHHHHHHSSCSCSSCGGGGGTCSEEEEESCCHHHHS
T ss_pred CeEEEEeCCCCchHHHHHHHHHHHhhcCCccccCCcccchhhHHHhhHhhcCCCCCCCCHHHHhhCCEEEEECCChHHhC
Confidence 478888888765555566666665 34322211100 00011123455678888885432 22
Q ss_pred HHHHHHHHHHH--HcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChH
Q 019775 115 EELLKVVPCAK--AKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRD 192 (336)
Q Consensus 115 ~~~~~~~~~ak--~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~ 192 (336)
+....-+..++ ++|+++|+|-.. .+..+..||..|.+..+.+ ..++..|+..++++...+ +
T Consensus 194 p~~~~~i~~a~~~~~G~klivIDPr-~t~ta~~AD~~l~irPGtD---------------~aL~~~m~~~ii~e~l~D-~ 256 (802)
T 3ml1_A 194 PILWTRVTDRRLSHPKTRVVVLSTF-THRCFDLADIGIIFKPQTD---------------LAMLNYIANYIIRNNKVN-K 256 (802)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEESS-BCGGGGTCSEEEECCTTTH---------------HHHHHHHHHHHHHTTCCC-H
T ss_pred hHHHHHHHHHHHhcCCCEEEEEeCC-CCchhHHhccEeccCCCHH---------------HHHHHHHHHHHHHCCCcC-H
Confidence 22233344444 379999999875 6667889999999877766 455555555566554333 3
Q ss_pred HHhhc
Q 019775 193 EYAAN 197 (336)
Q Consensus 193 ~~~~~ 197 (336)
+|.+.
T Consensus 257 ~Fv~~ 261 (802)
T 3ml1_A 257 DFVNK 261 (802)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 208
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=87.77 E-value=2.9 Score=31.80 Aligned_cols=83 Identities=20% Similarity=0.181 Sum_probs=53.3
Q ss_pred HHcCCCeEEEEeccch-HHHHHHHHHHHHhcCCeeeecCCcc-ccc-----cccCCC-CCCcEEEEEeCCCCcHHHHHHH
Q 019775 50 LLKCRGTIFFTGVGKS-GFVANKISQTLISLGIKSGFLNPLD-ALH-----GDIGIL-SSDDILVMFSKSGNTEELLKVV 121 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s-~~~a~~~~~~l~~~g~~~~~~~~~~-~~~-----~~~~~~-~~~dlvi~iS~sG~~~~~~~~~ 121 (336)
+.+. ++|-++|.+.. ..++..+...|.+.|+.++.+++.. .+. ..+..+ .+-|+++++.-+ ....+++
T Consensus 19 l~~p-~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~---~~~~~vv 94 (144)
T 2d59_A 19 LTRY-KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP---KLTMEYV 94 (144)
T ss_dssp HHHC-CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH---HHHHHHH
T ss_pred HcCC-CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH---HHHHHHH
Confidence 3446 59999999643 2445555566778888887777532 111 111222 345887776543 6778888
Q ss_pred HHHHHcCCeEEEEeC
Q 019775 122 PCAKAKGAYLVSVTS 136 (336)
Q Consensus 122 ~~ak~~g~~vi~IT~ 136 (336)
+.+-+.|++.+.++.
T Consensus 95 ~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 95 EQAIKKGAKVVWFQY 109 (144)
T ss_dssp HHHHHHTCSEEEECT
T ss_pred HHHHHcCCCEEEECC
Confidence 888899999876664
No 209
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=86.08 E-value=6.2 Score=40.24 Aligned_cols=59 Identities=25% Similarity=0.310 Sum_probs=42.3
Q ss_pred CCCCCcEEEEEeCCCC--cHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 98 ILSSDDILVMFSKSGN--TEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 98 ~~~~~dlvi~iS~sG~--~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
.+..-|++|++..... .+....-+..++++|+++|+|-.. .+..+..||..+.+..+++
T Consensus 181 D~~~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr-~t~ta~~AD~~l~irPGTD 241 (977)
T 1h0h_A 181 DLKNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPR-YTRTSTKCDLYAPLRSGSD 241 (977)
T ss_dssp GGGGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSS-CCTTGGGCSEEECCCTTCH
T ss_pred HHhhCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCC-CCchhHHhCeeeccCCCch
Confidence 3556788888854321 122345567788999999999875 5667789999998877766
No 210
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=85.47 E-value=4.5 Score=31.50 Aligned_cols=108 Identities=11% Similarity=0.078 Sum_probs=64.7
Q ss_pred HHHHHHHHHcCC--CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcc--------cc-----ccccCCCCCCcEEEE
Q 019775 43 TLTFTQTLLKCR--GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLD--------AL-----HGDIGILSSDDILVM 107 (336)
Q Consensus 43 i~~~~~~i~~a~--~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~--------~~-----~~~~~~~~~~dlvi~ 107 (336)
++++.+.+.+.+ -+.++||.-....--..+...|...|+.+...+-.. .. ...+.....=|.+++
T Consensus 35 ~~~l~~~~~~~g~l~~~~~Y~~~~~~~~~~~~~~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a~~~d~~vL 114 (165)
T 2qip_A 35 YNQFWYVATQEKEVVSAKAYAIASNDPKQRQFHHILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIAPDVDRVIL 114 (165)
T ss_dssp HHHHHHHHTTTEEEEEEEEEECCCCCHHHHHHHHHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHGGGCSEEEE
T ss_pred HHHHHHHHhcCCEEEEEEEEEccCCchhHHHHHHHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhhccCCEEEE
Confidence 445555554331 245566643221333456678888898876433110 00 000111245588899
Q ss_pred EeCCCCcHHHHHHHHHHHHc-CCeEEEEeCCC--CCccccccCEEEEcC
Q 019775 108 FSKSGNTEELLKVVPCAKAK-GAYLVSVTSVE--GNALAAVCDMNVHLP 153 (336)
Q Consensus 108 iS~sG~~~~~~~~~~~ak~~-g~~vi~IT~~~--~s~l~~~ad~~i~~~ 153 (336)
+|..| +...+++.++++ |.+|+++.-.. ...+.+.||..+.+.
T Consensus 115 vSgD~---DF~plv~~lr~~~G~~V~v~g~~~~~s~~L~~~ad~fi~l~ 160 (165)
T 2qip_A 115 VSGDG---DFSLLVERIQQRYNKKVTVYGVPRLTSQTLIDCADNFVAID 160 (165)
T ss_dssp ECCCG---GGHHHHHHHHHHHCCEEEEEECGGGSCHHHHHHSSEEEECS
T ss_pred EECCh---hHHHHHHHHHHHcCcEEEEEeCCCcChHHHHHhCCEEEecc
Confidence 88766 677788888996 99999998543 346888899887764
No 211
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=85.26 E-value=6.6 Score=33.50 Aligned_cols=100 Identities=12% Similarity=0.151 Sum_probs=64.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccc---------cc------------------------ccc-----
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDA---------LH------------------------GDI----- 96 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~---------~~------------------------~~~----- 96 (336)
++|.++|.|. +|..-...|...|..+.++.+... +. ...
T Consensus 14 k~VLVVGgG~---va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~ 90 (274)
T 1kyq_A 14 KRILLIGGGE---VGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEYIR 90 (274)
T ss_dssp CEEEEEEESH---HHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEEEC
T ss_pred CEEEEECCcH---HHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEEEc
Confidence 5899999997 566677888888988877653110 00 000
Q ss_pred CCCCCC---------cEEEEEeCCCCcHHHHHHHHHHHHc---CCeEEEEeCCCCCc-----cccccC-EEEEcCCCcc
Q 019775 97 GILSSD---------DILVMFSKSGNTEELLKVVPCAKAK---GAYLVSVTSVEGNA-----LAAVCD-MNVHLPVERE 157 (336)
Q Consensus 97 ~~~~~~---------dlvi~iS~sG~~~~~~~~~~~ak~~---g~~vi~IT~~~~s~-----l~~~ad-~~i~~~~~~~ 157 (336)
....++ +..+++...|....-..+++.|+++ |+.+-.+.+...+. .....+ +.+.++++..
T Consensus 91 ~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~~f~~Pa~~~~g~~l~IaIST~Gk 169 (274)
T 1kyq_A 91 SDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLCDFYFGANLEIGDRLQILISTNGL 169 (274)
T ss_dssp SSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGBSEECCEEEEETTTEEEEEEESSS
T ss_pred CCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccCeeEeeeEEEeCCCEEEEEECCCC
Confidence 111222 4567788888877778888999998 87776666654444 334456 7777765443
No 212
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=85.23 E-value=5.5 Score=39.12 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=44.7
Q ss_pred CCCCCcEEEEEeCC-CCc-H-HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 98 ILSSDDILVMFSKS-GNT-E-ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 98 ~~~~~dlvi~iS~s-G~~-~-~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
.+..-|++|++... ..+ + .....++.++++|+++|+|-.. .+..+..||..+.+..+++
T Consensus 157 d~~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD 218 (727)
T 2e7z_A 157 SFADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPR-RTKVAEMADIWLPLRYGTD 218 (727)
T ss_dssp CTTTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSS-CCHHHHHCSEEECCCTTCH
T ss_pred CcccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCC-CCcchhhcceeecCCCCcH
Confidence 46677888888543 222 3 5566788889999999999865 6777888999998877655
No 213
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=85.18 E-value=6.6 Score=38.82 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=43.7
Q ss_pred CCCCCcEEEEEeCC-CCc-H-HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 98 ILSSDDILVMFSKS-GNT-E-ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 98 ~~~~~dlvi~iS~s-G~~-~-~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
.+..-|++|++... ..+ + .....++.++++|+++|+|-.. .+..+..||..+.+..+++
T Consensus 196 d~~~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr-~t~ta~~Ad~~l~irPGtD 257 (765)
T 2vpz_A 196 DWENARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPR-FSTAAAKAHRWLPIKPGTD 257 (765)
T ss_dssp CGGGCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSB-CCTTGGGCSEEECCCTTCH
T ss_pred ccccCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCC-CCcchhhCCeEeCCCCCcH
Confidence 35566888888543 332 3 5666788899999999999865 5677888999999877655
No 214
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=84.54 E-value=2.6 Score=35.54 Aligned_cols=71 Identities=8% Similarity=0.042 Sum_probs=49.4
Q ss_pred CCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHHHHH
Q 019775 100 SSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFGDTV 179 (336)
Q Consensus 100 ~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l 179 (336)
...|++|++....+ ..+++.|+..|++||+|.+. +++. .+.|+.|.+ +.. |.-+.-+++.+|
T Consensus 157 ~~Pdll~V~Dp~~e----~~Ai~EA~~l~IPvIaivDT-n~dp-~~VdypIP~--NDd----------s~~sI~Li~~~l 218 (256)
T 2vqe_B 157 RLPDAIFVVDPTKE----AIAVREARKLFIPVIALADT-DSDP-DLVDYIIPG--NDD----------AIRSIQLILSRA 218 (256)
T ss_dssp SCCSEEEESCTTTT----HHHHHHHHHTTCCCEECCCT-TSCG-GGCSEECCS--CSS----------CHHHHHHHHHHH
T ss_pred cCCCEEEEeCCccc----hHHHHHHHHcCCCEEEEecC-CCCc-hhcceEeec--CCc----------hHHHHHHHHHHH
Confidence 46788888876443 35678889999999999986 5554 467877554 433 345556777777
Q ss_pred HHHHHhhcC
Q 019775 180 AIAMMGARN 188 (336)
Q Consensus 180 ~~~~~~~~~ 188 (336)
...+.+-++
T Consensus 219 a~ai~~g~~ 227 (256)
T 2vqe_B 219 VDLIIQARG 227 (256)
T ss_dssp HHHHHTTTS
T ss_pred HHHHHHHHh
Confidence 777776543
No 215
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=82.23 E-value=8.1 Score=39.57 Aligned_cols=58 Identities=14% Similarity=0.170 Sum_probs=40.1
Q ss_pred CCCCcEEEEEeCCCC-c-HHHHHHHHHHH-HcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 99 LSSDDILVMFSKSGN-T-EELLKVVPCAK-AKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~-~-~~~~~~~~~ak-~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
+..-|++|++..... + +....-+..++ ++|+++|+|-.. .+..+..||..+.+..+++
T Consensus 220 ~~~ad~il~~G~N~~~~~p~~~~~i~~a~~~~GaklivIDPr-~t~ta~~AD~~l~irPGTD 280 (1015)
T 1kqf_A 220 IKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPR-FTRTASVADIYAPIRSGTD 280 (1015)
T ss_dssp GGGCSEEEEESCCHHHHSTTTTHHHHHHHHHSCCEEEEECSS-CCHHHHTCSEEECCCTTCH
T ss_pred HhhCCEEEEECCChhhhCchHHHHHHHHHHHCCCeEEEEeCC-CCchhHhhCeeeccCCCch
Confidence 556788888854321 1 11233456677 899999999864 6677889999998876655
No 216
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=80.01 E-value=4 Score=30.16 Aligned_cols=79 Identities=10% Similarity=0.036 Sum_probs=53.5
Q ss_pred CeEEEEeccch-HHHHHHHHHHHHhcCCeeeecCCc-cccc-----cccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc
Q 019775 55 GTIFFTGVGKS-GFVANKISQTLISLGIKSGFLNPL-DALH-----GDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK 127 (336)
Q Consensus 55 ~~I~i~G~G~s-~~~a~~~~~~l~~~g~~~~~~~~~-~~~~-----~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~ 127 (336)
++|-++|.... ...+......|...|++++.+++. ..+. ..+..+.+-|+++++-- .+.+.++++.|.++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p---~~~v~~~v~e~~~~ 81 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYIN---PQNQLSEYNYILSL 81 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSC---HHHHGGGHHHHHHH
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeC---HHHHHHHHHHHHhc
Confidence 58999998653 356777777788889999988853 2221 11222323678777654 46677778888899
Q ss_pred CCeEEEEeC
Q 019775 128 GAYLVSVTS 136 (336)
Q Consensus 128 g~~vi~IT~ 136 (336)
|++.+.++.
T Consensus 82 g~k~v~~~~ 90 (122)
T 3ff4_A 82 KPKRVIFNP 90 (122)
T ss_dssp CCSEEEECT
T ss_pred CCCEEEECC
Confidence 999876654
No 217
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=79.63 E-value=4.5 Score=30.57 Aligned_cols=82 Identities=26% Similarity=0.233 Sum_probs=52.1
Q ss_pred HcCCCeEEEEeccch-HHHHHHHHHHHHhcCCeeeecCCc---cccc-----cccCCC-CCCcEEEEEeCCCCcHHHHHH
Q 019775 51 LKCRGTIFFTGVGKS-GFVANKISQTLISLGIKSGFLNPL---DALH-----GDIGIL-SSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 51 ~~a~~~I~i~G~G~s-~~~a~~~~~~l~~~g~~~~~~~~~---~~~~-----~~~~~~-~~~dlvi~iS~sG~~~~~~~~ 120 (336)
.+. ++|.++|.+.. ...+..+...|.+.|++++.+++. ..+. ..+..+ .+-|+++++--+ ..+.++
T Consensus 11 ~~p-~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~---~~~~~v 86 (140)
T 1iuk_A 11 SQA-KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP---SALMDH 86 (140)
T ss_dssp HHC-CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH---HHHTTT
T ss_pred cCC-CEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH---HHHHHH
Confidence 366 69999998643 245555666678889988888764 2221 112222 235777766544 566677
Q ss_pred HHHHHHcCCeEEEEeC
Q 019775 121 VPCAKAKGAYLVSVTS 136 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~ 136 (336)
++.+.+.|++.+.++.
T Consensus 87 ~~~~~~~gi~~i~~~~ 102 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQS 102 (140)
T ss_dssp HHHHHHHCCSCEEECT
T ss_pred HHHHHHcCCCEEEEcC
Confidence 7788888988766653
No 218
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=79.33 E-value=8.8 Score=31.60 Aligned_cols=99 Identities=8% Similarity=0.144 Sum_probs=56.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccc--c---------ccccCCCCCC---cEEEEEeCCCCcHHHHHH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDA--L---------HGDIGILSSD---DILVMFSKSGNTEELLKV 120 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~--~---------~~~~~~~~~~---dlvi~iS~sG~~~~~~~~ 120 (336)
++|.++|.|. +|..-...|...|-.+.++.+... + ........++ +.-++|+.+|....-..+
T Consensus 32 k~VLVVGgG~---va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~I 108 (223)
T 3dfz_A 32 RSVLVVGGGT---IATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp CCEEEECCSH---HHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHHH
T ss_pred CEEEEECCCH---HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHHH
Confidence 5899999984 566666778888888888763211 1 0001112222 234455666766555556
Q ss_pred HHHHHHcCCeEEEEeCCCCCc-----cccccCEEEEcCCCcc
Q 019775 121 VPCAKAKGAYLVSVTSVEGNA-----LAAVCDMNVHLPVERE 157 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~~~~s~-----l~~~ad~~i~~~~~~~ 157 (336)
.+.|+ +|+.+-.+.+...+. +-+-.++.+-++++..
T Consensus 109 ~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~ 149 (223)
T 3dfz_A 109 KQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGA 149 (223)
T ss_dssp HHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTS
T ss_pred HHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCC
Confidence 66677 899987777655443 2334577777766544
No 219
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=79.28 E-value=15 Score=26.18 Aligned_cols=106 Identities=8% Similarity=0.072 Sum_probs=71.5
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccC----CCCCCcEEEEEeCCCC
Q 019775 38 LSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIG----ILSSDDILVMFSKSGN 113 (336)
Q Consensus 38 ~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~----~~~~~dlvi~iS~sG~ 113 (336)
-+++.+.+++..|...+-|+.++=......--..--..|.+.|..+..+.+...+...+. ....-|++++.+. ..
T Consensus 10 sdpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvvvivtt-dd 88 (162)
T 2l82_A 10 SDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTT-DD 88 (162)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEEC-CC
T ss_pred CCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEec-Cc
Confidence 367888999999987654665554444444444444667788999999887655443322 2345577666654 33
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCCCCcccc
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVEGNALAA 144 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~ 144 (336)
..-+...++.||++|+.+..+-+|.+-.-.+
T Consensus 89 kewikdfieeakergvevfvvynnkdddrrk 119 (162)
T 2l82_A 89 KEWIKDFIEEAKERGVEVFVVYNNKDDDRRK 119 (162)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHhcCcEEEEEecCCCchhHH
Confidence 4557778999999999999998887654433
No 220
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=78.32 E-value=13 Score=37.95 Aligned_cols=85 Identities=16% Similarity=0.230 Sum_probs=53.5
Q ss_pred CCCCcEEEEEeCCC-Cc-HHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHHHHHHH
Q 019775 99 LSSDDILVMFSKSG-NT-EELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAIQMVFG 176 (336)
Q Consensus 99 ~~~~dlvi~iS~sG-~~-~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~~~~l~ 176 (336)
+..-|++|++.... .+ .....-+..+|++|+++|+|-.. .+..+..||..+.+..+++ ..++
T Consensus 244 ~~nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr-~t~ta~~AD~wl~irPGTD---------------~Al~ 307 (976)
T 2ivf_A 244 LLDAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPD-FNPTTPAADLHVPVRVGSD---------------AAFW 307 (976)
T ss_dssp GGGCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSS-CCTTGGGCSEEECCCTTCH---------------HHHH
T ss_pred HhhCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCC-CCcchhhcCeEeccCCCcH---------------HHHH
Confidence 44568888885431 11 12345567788899999999875 5666789999999977766 3444
Q ss_pred HHHHHHHHhhcCCChHHHhhcCCC
Q 019775 177 DTVAIAMMGARNLTRDEYAANHPA 200 (336)
Q Consensus 177 d~l~~~~~~~~~~~~~~~~~~~~~ 200 (336)
..++..++++.-.+ ++|.+.+.+
T Consensus 308 ~am~~~ii~e~l~D-~~fv~~~t~ 330 (976)
T 2ivf_A 308 LGLSQVMIDEKLFD-RQFVCEQTD 330 (976)
T ss_dssp HHHHHHHHHTTCSC-HHHHHHHBS
T ss_pred HHHHHHHHHcCCcc-HHHHHHhcC
Confidence 44555555554333 445444443
No 221
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=77.28 E-value=9 Score=29.04 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=49.7
Q ss_pred HHcCCCeEEEEeccch-HHHHHHHHHHHHhcCCeeeecCCcc---ccc-----cccCCC-CCCcEEEEEeCCCCcHHHHH
Q 019775 50 LLKCRGTIFFTGVGKS-GFVANKISQTLISLGIKSGFLNPLD---ALH-----GDIGIL-SSDDILVMFSKSGNTEELLK 119 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s-~~~a~~~~~~l~~~g~~~~~~~~~~---~~~-----~~~~~~-~~~dlvi~iS~sG~~~~~~~ 119 (336)
+.+. ++|-++|.+.. ..++..+...|.+.|+.++.+++.. ... ..+..+ .+-|+++++.-+ ..+.+
T Consensus 10 l~~p-~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp~---~~v~~ 85 (145)
T 2duw_A 10 LTST-RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRNS---EAAWG 85 (145)
T ss_dssp HHHC-CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSCS---THHHH
T ss_pred HhCC-CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeCH---HHHHH
Confidence 3446 59999999643 2455556666777788888777543 211 111222 334777766443 55666
Q ss_pred HHHHHHHcCCeEEEEe
Q 019775 120 VVPCAKAKGAYLVSVT 135 (336)
Q Consensus 120 ~~~~ak~~g~~vi~IT 135 (336)
+++.+.+.|++.+.+.
T Consensus 86 v~~~~~~~g~~~i~i~ 101 (145)
T 2duw_A 86 VAQEAIAIGAKTLWLQ 101 (145)
T ss_dssp HHHHHHHHTCCEEECC
T ss_pred HHHHHHHcCCCEEEEc
Confidence 6666777888766553
No 222
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=76.70 E-value=3.2 Score=34.10 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=34.3
Q ss_pred CCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 100 SSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 100 ~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
...|++|++.. ..-..++++|...|++||++.+....| .+.|+.|.+.
T Consensus 148 ~~Pdllvv~Dp----~~e~~ai~Ea~~l~IP~IalvDTn~~p--~~Vdy~IP~N 195 (218)
T 3r8n_B 148 GLPDALFVIDA----DHEHIAIKEANNLGIPVFAIVDTNSDP--DGVDFVIPGN 195 (218)
T ss_dssp SCCCSCEEEET----GGGHHHHHHHHHHTCCCEEECCSSSCC--SSCSEECCSC
T ss_pred cCCCeEEecCc----ccccHHHHHHHHhCCCEEEEEeCcCCC--cccceEeecC
Confidence 35788888864 333556788889999999999875444 5677775543
No 223
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=76.06 E-value=14 Score=33.93 Aligned_cols=99 Identities=10% Similarity=0.098 Sum_probs=60.1
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc--cccc---------cccCCCCCCc---EEEEEeCCCCcHHHHHH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL--DALH---------GDIGILSSDD---ILVMFSKSGNTEELLKV 120 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~--~~~~---------~~~~~~~~~d---lvi~iS~sG~~~~~~~~ 120 (336)
++|.++|.|.+ |..-...|.+.|-.+.++.+. ..+. .......++| ..+++..+|...--..+
T Consensus 13 ~~vlVvGgG~v---a~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~~n~~i 89 (457)
T 1pjq_A 13 RDCLIVGGGDV---AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDTVNQRV 89 (457)
T ss_dssp CEEEEECCSHH---HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHHHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHHHHHHH
Confidence 58999999974 555556777888888776531 1110 0011122222 24555567777666778
Q ss_pred HHHHHHcCCeEEEEeCCCCCccc-----cccCEEEEcCCCc
Q 019775 121 VPCAKAKGAYLVSVTSVEGNALA-----AVCDMNVHLPVER 156 (336)
Q Consensus 121 ~~~ak~~g~~vi~IT~~~~s~l~-----~~ad~~i~~~~~~ 156 (336)
.+.|+++|+.+-.+++...+... .-.++.+-+.++.
T Consensus 90 ~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~G 130 (457)
T 1pjq_A 90 SDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGG 130 (457)
T ss_dssp HHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTT
T ss_pred HHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCC
Confidence 89999999997666655444322 3456666666543
No 224
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=75.58 E-value=9 Score=33.53 Aligned_cols=82 Identities=18% Similarity=0.168 Sum_probs=57.5
Q ss_pred eEEEEeccchHHHHHHHHHHHHh-cCC-eeeecCCccccccccCCCCCCcEEEEEeCCCC-cHH---HHHHHHHHHHcCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLIS-LGI-KSGFLNPLDALHGDIGILSSDDILVMFSKSGN-TEE---LLKVVPCAKAKGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~-~g~-~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-~~~---~~~~~~~ak~~g~ 129 (336)
.+.+|+..++..+|+.++..|.. +|. .+.-+++++.......+....|++|+-|.++. +.. ++-++..+|+.++
T Consensus 3 ~~~if~g~~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA 82 (326)
T 3s5j_B 3 NIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASA 82 (326)
T ss_dssp CEEEEECSSCCHHHHHHHHHTTCCCCCEEEEECTTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEECCCCHHHHHHHHHHhCCceeeeEEeECCCCCEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCC
Confidence 46778877777899999988873 343 33446677776666667778899999998886 333 4445678888888
Q ss_pred eEE-EEeCC
Q 019775 130 YLV-SVTSV 137 (336)
Q Consensus 130 ~vi-~IT~~ 137 (336)
+-| +|-.+
T Consensus 83 ~rIt~ViPY 91 (326)
T 3s5j_B 83 SRVTAVIPC 91 (326)
T ss_dssp SEEEEEESS
T ss_pred cEEEEeccC
Confidence 644 55543
No 225
>1q16_A Respiratory nitrate reductase 1 alpha chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 3ir7_A* 1y5i_A* 1siw_A* 1y4z_A* 1r27_A* 1y5l_A* 1y5n_A* 3ir6_A* 3ir5_A* 3egw_A*
Probab=75.42 E-value=14 Score=38.51 Aligned_cols=57 Identities=16% Similarity=0.195 Sum_probs=40.1
Q ss_pred CCCcEEEEEeCCC-Cc-HHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 100 SSDDILVMFSKSG-NT-EELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 100 ~~~dlvi~iS~sG-~~-~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
..-|++|++...- .+ ......+..++++|+++|+|... .+..++.||..|.+..+++
T Consensus 245 ~~ad~iv~wGsN~~~t~~~~~~~l~~ar~~G~KvVvIDPr-~t~ta~~AD~wl~irPGTD 303 (1247)
T 1q16_A 245 YNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPD-YAEIAKLCDLWLAPKQGTD 303 (1247)
T ss_dssp GGCSEEEEESCCHHHHSGGGHHHHHHHGGGTCEEEEECSS-CCHHHHHSSEEECCCTTCH
T ss_pred hhCCEEEEECCCchhccHHHHHHHHHHHHCCCEEEEEeCC-CCcchhhCCeEEeeCCCcH
Confidence 3467888775432 11 12234567788899999999875 6667899999999977766
No 226
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=73.95 E-value=17 Score=25.86 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=55.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
.+|.++.- .......+...|...|..+....+........... +-|++|+ ...-...+-.++++.+++. ++++|
T Consensus 8 ~~ilivdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlvi~-d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (130)
T 3eod_A 8 KQILIVED--EQVFRSLLDSWFSSLGATTVLAADGVDALELLGGF-TPDLMIC-DIAMPRMNGLKLLEHIRNRGDQTPVL 83 (130)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTC-CCSEEEE-CCC-----CHHHHHHHHHTTCCCCEE
T ss_pred CeEEEEeC--CHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcC-CCCEEEE-ecCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 47877763 44556667777888899888877665544444333 3455444 3322223345555666654 57899
Q ss_pred EEeCCCCCcc-----ccccCEEEEcCC
Q 019775 133 SVTSVEGNAL-----AAVCDMNVHLPV 154 (336)
Q Consensus 133 ~IT~~~~s~l-----~~~ad~~i~~~~ 154 (336)
.+|+...... ..-++.++.-|.
T Consensus 84 ~~t~~~~~~~~~~~~~~g~~~~l~KP~ 110 (130)
T 3eod_A 84 VISATENMADIAKALRLGVEDVLLKPV 110 (130)
T ss_dssp EEECCCCHHHHHHHHHHCCSEEEESCC
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEeCCC
Confidence 9998765542 222455565554
No 227
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=73.18 E-value=15 Score=32.09 Aligned_cols=81 Identities=12% Similarity=0.059 Sum_probs=56.4
Q ss_pred eEEEEeccchHHHHHHHHHHHHhc-CC-eeeecCCccccccccCCCCCCcEEEEEeCCCC-cHHH---HHHHHHHHHcCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISL-GI-KSGFLNPLDALHGDIGILSSDDILVMFSKSGN-TEEL---LKVVPCAKAKGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~-g~-~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-~~~~---~~~~~~ak~~g~ 129 (336)
.+.+|+..++..+|+.++.+|..- |. .+.-+++++.......+....|++|+-|.++. +..+ +-++..+|+.++
T Consensus 7 ~~~i~~g~~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA 86 (319)
T 3dah_A 7 GLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASA 86 (319)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTSCCCCEEEEECTTSCEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTB
T ss_pred ceEEEECCCCHHHHHHHHHHhCCceeeeEEEECCCCCEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 577888888889999999998743 33 33446677766655566777899998888765 3444 444678888887
Q ss_pred eE-EEEeC
Q 019775 130 YL-VSVTS 136 (336)
Q Consensus 130 ~v-i~IT~ 136 (336)
+- .+|-.
T Consensus 87 ~rIt~ViP 94 (319)
T 3dah_A 87 GRITAAIP 94 (319)
T ss_dssp SEEEEEES
T ss_pred cEEEEEcc
Confidence 64 44443
No 228
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=72.72 E-value=9.3 Score=28.27 Aligned_cols=76 Identities=21% Similarity=0.310 Sum_probs=46.6
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCC---CCcH--HHHHHHHHHHH--cCC
Q 019775 57 IFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKS---GNTE--ELLKVVPCAKA--KGA 129 (336)
Q Consensus 57 I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~s---G~~~--~~~~~~~~ak~--~g~ 129 (336)
+|.-.+|.+..+|+.++..+...|..+..++-.+.- ...+.+.|.+|+.|-. |..+ .+...++.++. +|-
T Consensus 4 ~Y~S~tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~---~~~l~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k 80 (138)
T 5nul_A 4 VYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVN---IDELLNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGK 80 (138)
T ss_dssp EEECSSSHHHHHHHHHHHHHHHTTCCCEEEEGGGCC---HHHHTTCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTC
T ss_pred EEECCCchHHHHHHHHHHHHHHCCCeEEEEEhhhCC---HHHHhhCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCC
Confidence 344556899999999999999988877665422111 1123455665555442 3233 57777777664 455
Q ss_pred eEEEEe
Q 019775 130 YLVSVT 135 (336)
Q Consensus 130 ~vi~IT 135 (336)
++.+++
T Consensus 81 ~~~~f~ 86 (138)
T 5nul_A 81 KVALFG 86 (138)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 229
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=72.10 E-value=12 Score=32.22 Aligned_cols=56 Identities=14% Similarity=0.197 Sum_probs=44.9
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccc-cccCEEEEcCCC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALA-AVCDMNVHLPVE 155 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~-~~ad~~i~~~~~ 155 (336)
+.+-|++|++-.|....-...+.+.++++|++++.|-.. ..++. ..+|+.|.-+.+
T Consensus 214 ~~~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~-~t~~~~~~~d~~i~g~a~ 270 (290)
T 3u31_A 214 IAKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINIS-KTYITNKMSDYHVCAKFS 270 (290)
T ss_dssp HHHCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESS-CCTTTTTTCSEEEESCGG
T ss_pred HhcCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCC-CCCCCCccceEEEECCHH
Confidence 456799999999999999999999999999999988764 44554 357888875443
No 230
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=71.68 E-value=7.8 Score=34.20 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVE 155 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~ 155 (336)
.-..++..||+.|.+++++..+++++-.++||..+.++..
T Consensus 12 ~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~ 51 (363)
T 4ffl_A 12 QGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVI 51 (363)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCC
Confidence 3457788999999999999999999999999988877653
No 231
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=71.50 E-value=27 Score=27.72 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=58.6
Q ss_pred HHHHHHHHH-cCCCeEEEEeccchHHHHH---HHHHHHHhcCCeeeecCCccccc--------------------cccCC
Q 019775 43 TLTFTQTLL-KCRGTIFFTGVGKSGFVAN---KISQTLISLGIKSGFLNPLDALH--------------------GDIGI 98 (336)
Q Consensus 43 i~~~~~~i~-~a~~~I~i~G~G~s~~~a~---~~~~~l~~~g~~~~~~~~~~~~~--------------------~~~~~ 98 (336)
-..++..+. ..+.-..+-|.|++..... .+...-..-|+.+..+.+..... ..-..
T Consensus 39 ~~~a~~~l~~s~~~~~iv~g~ggs~~~~~~~a~L~~~a~~~Gr~V~vLAp~~~s~~~l~~~~~l~~~t~t~~~ll~~~~~ 118 (189)
T 2l8b_A 39 YSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA 118 (189)
T ss_dssp HHHHHHHHHHHSCCEECCBCSSCSHHHHHHHHHHHHHHHHTTCCEEEECSTTHHHHHHSCTTTCSSCSSSTTTTTTTSCC
T ss_pred chhHHHHHhccCCceEEEecccchHHHHHHHHHHHHHHHhcCeEEEEEcCchHHHHHHHhhcCcCcceeehhhhhcCCCC
Confidence 445555553 3323455567788888887 45445555688888665321110 00001
Q ss_pred CCCCcEEEEEeCCCC-cHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 99 LSSDDILVMFSKSGN-TEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~-~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.++|++|+=-.+-- .+|++.++..|++.|+++|.+=+.
T Consensus 119 ~tp~s~lIVD~AekLS~kE~~~Lld~A~~~naqvvll~~~ 158 (189)
T 2l8b_A 119 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG 158 (189)
T ss_dssp CCCCCEEEEEESSSHHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEEechhhcCHHHHHHHHHHHHhcCCEEEEeCCc
Confidence 367776444433333 489999999999999999988653
No 232
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=70.40 E-value=10 Score=32.40 Aligned_cols=79 Identities=9% Similarity=0.162 Sum_probs=53.3
Q ss_pred EEEeccchHHHHHHHHHHHHhc--CCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHH---HHHHHHHcCCeEE
Q 019775 58 FFTGVGKSGFVANKISQTLISL--GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLK---VVPCAKAKGAYLV 132 (336)
Q Consensus 58 ~i~G~G~s~~~a~~~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~---~~~~ak~~g~~vi 132 (336)
.+|+..++..+|+.++.+|... ...+.-+++++.......+....|++|+-|.++.+..+.+ ++..+|+.+++-|
T Consensus 2 ~i~~~~~~~~la~~ia~~l~~~l~~~~~~~F~dGE~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~~~a~~i 81 (284)
T 1u9y_A 2 IVVSGSQSQNLAFKVAKLLNTKLTRVEYKRFPDNEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKKI 81 (284)
T ss_dssp EEEECTTCHHHHHHHHHHTTCCEECEEEEECTTCCEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred EEEECCCCHHHHHHHHHHhCCeeeeeEEEECCCCCEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCceE
Confidence 3677777888999988887633 3334456677766665666777899998888764544444 4678888888644
Q ss_pred -EEeC
Q 019775 133 -SVTS 136 (336)
Q Consensus 133 -~IT~ 136 (336)
++..
T Consensus 82 ~~v~P 86 (284)
T 1u9y_A 82 TLVAP 86 (284)
T ss_dssp EEECS
T ss_pred EEEec
Confidence 4443
No 233
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=68.93 E-value=60 Score=28.45 Aligned_cols=112 Identities=10% Similarity=0.022 Sum_probs=68.8
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeccc----hHHHHHHHHHHHHhcCCeeeecCCcc--ccccccCC------C------
Q 019775 38 LSLPHTLTFTQTLLKCRGTIFFTGVGK----SGFVANKISQTLISLGIKSGFLNPLD--ALHGDIGI------L------ 99 (336)
Q Consensus 38 ~~~~~i~~~~~~i~~a~~~I~i~G~G~----s~~~a~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~------~------ 99 (336)
++.++++++.+.|.++ ++|.++|--. +-..+.-++..|...|+++..+.+.. .....+.. .
T Consensus 6 ~~~~~~~~l~~~i~~~-~~i~I~~H~~pD~DaiGS~~~l~~~l~~~g~~~~~~~~~~~~~~~~fl~~~~~i~~~~~~~~~ 84 (343)
T 3dma_A 6 IAQAHIDHFTKWFERA-DKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPNAFPDFLKWMPGSKDILLYDRYQEF 84 (343)
T ss_dssp SCHHHHHHHHHHHHHC-SEEEEEECSSCCHHHHHHHHHHHHHHHHTSCEEEEEESSCCCGGGTTSTTGGGCEETTTCHHH
T ss_pred cCHHHHHHHHHHHhcC-CeEEEEecCCCChHHHHHHHHHHHHHHHcCCCEEEECCCCCchHhhhccCcchhcccccChHH
Confidence 4678899999999999 6999999753 33466666677778899987654221 11111110 0
Q ss_pred -----CCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 100 -----SSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 100 -----~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
.+.|++|++-.+....- -.....+.+.+.+++.|=....+. .++++.+.-|
T Consensus 85 ~~~~~~~~~lvi~VD~~~~~r~-~~~~~~l~~~~~~~ivIDHH~~~~--~~~~~~~i~~ 140 (343)
T 3dma_A 85 ADKLIMEADVICCLDFNALKRI-DEMSDIVAASPGRKIMIDHHLYPE--DFCRITISHP 140 (343)
T ss_dssp HHHHHHHCSEEEEESCSSGGGG-TTCHHHHHHCCSEEEEEECCSSCC--SCSSEEEECT
T ss_pred HhhcccCCCEEEEEeCCChHHh-chhHHHHHhCCCCEEEEcCCCCCC--CCCceEEEec
Confidence 13578888877654432 122334555667777665555444 4677776644
No 234
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=68.92 E-value=5.6 Score=26.76 Aligned_cols=44 Identities=14% Similarity=0.223 Sum_probs=35.8
Q ss_pred EEEEeCCCCc---HHHHHHHHHHHHcCCeEEEEeCCCCCccccccCE
Q 019775 105 LVMFSKSGNT---EELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDM 148 (336)
Q Consensus 105 vi~iS~sG~~---~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~ 148 (336)
+-++...|+. -.+.++++.|++.|...|-|..+...|+++.-||
T Consensus 16 Vrli~~~Ge~lGv~~~~eAl~~A~e~~LDLVevsp~a~PPVCkImDy 62 (78)
T 1tif_A 16 VRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVAPNAKPPVCRIMDY 62 (78)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEETTSSSCEEEEECH
T ss_pred EEEECCCCcCCCcccHHHHHHHHHHcCCCEEEECCCCCCCEEEEecc
Confidence 4455666654 4578899999999999999999999999888775
No 235
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=68.54 E-value=7.3 Score=35.82 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=55.8
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCCeeeecCCccccccc-------cCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGIKSGFLNPLDALHGD-------IGILSSDDILVMFSKSGNTEELLKVVPCAKA 126 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~~~~~~~~-------~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~ 126 (336)
+.+.+-++...+ -+|.++...|..+|+..+-+++....... .....+.|- =+=|.-|...+..++++.|++
T Consensus 10 ~~~i~~~f~W~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy-~i~~~~Gt~~df~~lv~~aH~ 88 (496)
T 4gqr_A 10 RTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSY-KLCTRSGNEDEFRNMVTRCNN 88 (496)
T ss_dssp CCEEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCc-eeCCCCCCHHHHHHHHHHHHH
Confidence 456677777666 77888888899999999998864432110 001222332 134888999999999999999
Q ss_pred cCCeEEE
Q 019775 127 KGAYLVS 133 (336)
Q Consensus 127 ~g~~vi~ 133 (336)
+|++||+
T Consensus 89 ~Gi~Vil 95 (496)
T 4gqr_A 89 VGVRIYV 95 (496)
T ss_dssp TTCEEEE
T ss_pred CCCEEEE
Confidence 9999984
No 236
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.03 E-value=12 Score=27.76 Aligned_cols=80 Identities=14% Similarity=0.090 Sum_probs=44.6
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccccc---------ccC-----------CCCCCcEEEEEeCCCCc
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHG---------DIG-----------ILSSDDILVMFSKSGNT 114 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~---------~~~-----------~~~~~dlvi~iS~sG~~ 114 (336)
++|.++|.|. ++..++..|...|.++..+........ ... .+.+-|.+| ...|..
T Consensus 7 ~~v~I~G~G~---iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi--~~~~~~ 81 (141)
T 3llv_A 7 YEYIVIGSEA---AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVL--ITGSDD 81 (141)
T ss_dssp CSEEEECCSH---HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEE--ECCSCH
T ss_pred CEEEEECCCH---HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEE--EecCCH
Confidence 4899999876 566777777777888877652111000 000 122234443 334455
Q ss_pred HHHHHHHHHHHHcC-CeEEEEeCCCC
Q 019775 115 EELLKVVPCAKAKG-AYLVSVTSVEG 139 (336)
Q Consensus 115 ~~~~~~~~~ak~~g-~~vi~IT~~~~ 139 (336)
..-..++..+|+.| .++++...+..
T Consensus 82 ~~n~~~~~~a~~~~~~~iia~~~~~~ 107 (141)
T 3llv_A 82 EFNLKILKALRSVSDVYAIVRVSSPK 107 (141)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESCGG
T ss_pred HHHHHHHHHHHHhCCceEEEEEcChh
Confidence 55566667777765 44666555443
No 237
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=67.73 E-value=11 Score=26.89 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=39.9
Q ss_pred eccchHHHHHHHHHHHHhcCCeeeecC-CccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeC
Q 019775 61 GVGKSGFVANKISQTLISLGIKSGFLN-PLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 61 G~G~s~~~a~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
|.|+| .++..+...+...|+.+.... +....... ...-|++ ++...-....-+.-+.+.+.+.+++.|..
T Consensus 14 G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~~~~~~~---~~~~D~I--i~t~~l~~~~~~~~~~~~~~~~pv~~I~~ 84 (109)
T 2l2q_A 14 GMSTS-MLVQRIEKYAKSKNINATIEAIAETRLSEV---VDRFDVV--LLAPQSRFNKKRLEEITKPKGIPIEIINT 84 (109)
T ss_dssp SCSSC-HHHHHHHHHHHHHTCSEEEEEECSTTHHHH---TTTCSEE--EECSCCSSHHHHHHHHHHHHTCCEEECCH
T ss_pred hHhHH-HHHHHHHHHHHHCCCCeEEEEecHHHHHhh---cCCCCEE--EECCccHHHHHHHHHHhcccCCCEEEECh
Confidence 34456 888999999988887653321 22222221 2344654 33333333344444455667899988865
No 238
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=67.71 E-value=22 Score=25.80 Aligned_cols=84 Identities=15% Similarity=0.055 Sum_probs=51.1
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEe-CC--CCcHHHHHHHHHHHHcCCeE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFS-KS--GNTEELLKVVPCAKAKGAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS-~s--G~~~~~~~~~~~ak~~g~~v 131 (336)
.+|.++. ........+...|...|..+....+.......+..-.+-|++|+=. .+ ....++++.++.. .++++
T Consensus 6 ~~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~--~~~~i 81 (140)
T 3h5i_A 6 KKILIVE--DSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI--SELPV 81 (140)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH--CCCCE
T ss_pred cEEEEEe--CCHHHHHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC--CCCCE
Confidence 3677765 3445667777778888998887776655444333222446655533 22 2334555555432 67899
Q ss_pred EEEeCCCCCcc
Q 019775 132 VSVTSVEGNAL 142 (336)
Q Consensus 132 i~IT~~~~s~l 142 (336)
|++|+......
T Consensus 82 i~ls~~~~~~~ 92 (140)
T 3h5i_A 82 VFLTAHTEPAV 92 (140)
T ss_dssp EEEESSSSCCC
T ss_pred EEEECCCCHHH
Confidence 99999876543
No 239
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=67.42 E-value=20 Score=26.72 Aligned_cols=95 Identities=12% Similarity=0.085 Sum_probs=57.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHH----cCC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKA----KGA 129 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~----~g~ 129 (336)
.+|.++. ........+...|...|..+....+.......+... +-|++|+= ..++ .+-.++++.+++ .++
T Consensus 8 ~~ILivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~-~~dlii~D~~l~~--~~g~~~~~~lr~~~~~~~~ 82 (154)
T 3gt7_A 8 GEILIVE--DSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLT-RPDLIISDVLMPE--MDGYALCRWLKGQPDLRTI 82 (154)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTC-CCSEEEEESCCSS--SCHHHHHHHHHHSTTTTTS
T ss_pred CcEEEEe--CCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhC-CCCEEEEeCCCCC--CCHHHHHHHHHhCCCcCCC
Confidence 4777765 345667777888888899988877766554444333 34554443 3333 334556666665 468
Q ss_pred eEEEEeCCCCCccc-----cccCEEEEcCC
Q 019775 130 YLVSVTSVEGNALA-----AVCDMNVHLPV 154 (336)
Q Consensus 130 ~vi~IT~~~~s~l~-----~~ad~~i~~~~ 154 (336)
++|++|+....... .-++.++.-|.
T Consensus 83 pii~~s~~~~~~~~~~~~~~g~~~~l~KP~ 112 (154)
T 3gt7_A 83 PVILLTILSDPRDVVRSLECGADDFITKPC 112 (154)
T ss_dssp CEEEEECCCSHHHHHHHHHHCCSEEEESSC
T ss_pred CEEEEECCCChHHHHHHHHCCCCEEEeCCC
Confidence 99999987654332 22455555443
No 240
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=67.38 E-value=36 Score=25.35 Aligned_cols=82 Identities=21% Similarity=0.165 Sum_probs=48.5
Q ss_pred HHcCCCeEEEEeccch-HHHHHHHHHHHHhcCCeeeecCCccc-c-----ccccCCC-CCCcEEEEEeCCCCcHHHHHHH
Q 019775 50 LLKCRGTIFFTGVGKS-GFVANKISQTLISLGIKSGFLNPLDA-L-----HGDIGIL-SSDDILVMFSKSGNTEELLKVV 121 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s-~~~a~~~~~~l~~~g~~~~~~~~~~~-~-----~~~~~~~-~~~dlvi~iS~sG~~~~~~~~~ 121 (336)
+.+. ++|-++|.+.. ..++..+...|.+.|++++.+++... . ......+ .+-|+++++-- .+.+.+++
T Consensus 11 l~~p-~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp---~~~v~~v~ 86 (138)
T 1y81_A 11 SKEF-RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP---PKVGLQVA 86 (138)
T ss_dssp ---C-CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC---HHHHHHHH
T ss_pred ccCC-CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC---HHHHHHHH
Confidence 4456 59999998332 24455555567778888887775321 1 1111122 34576665443 47778888
Q ss_pred HHHHHcCCeEEEEe
Q 019775 122 PCAKAKGAYLVSVT 135 (336)
Q Consensus 122 ~~ak~~g~~vi~IT 135 (336)
+.+.+.|++.+.+-
T Consensus 87 ~~~~~~g~~~i~~~ 100 (138)
T 1y81_A 87 KEAVEAGFKKLWFQ 100 (138)
T ss_dssp HHHHHTTCCEEEEC
T ss_pred HHHHHcCCCEEEEc
Confidence 88888898865553
No 241
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=67.08 E-value=18 Score=25.59 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=54.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc----CCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK----GAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~----g~~ 130 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ +..+|. +-.++++.++++ +++
T Consensus 4 ~ILivdd--~~~~~~~l~~~l~~~g~~v~~~~~~~~al~~l~~~-~~dlvllD~~~p~~--~g~~~~~~l~~~~~~~~~p 78 (122)
T 3gl9_A 4 KVLLVDD--SAVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEF-TPDLIVLXIMMPVM--DGFTVLKKLQEKEEWKRIP 78 (122)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTB-CCSEEEECSCCSSS--CHHHHHHHHHTSTTTTTSC
T ss_pred eEEEEeC--CHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhc-CCCEEEEeccCCCC--cHHHHHHHHHhcccccCCC
Confidence 6666653 33456667777788899888777665544444333 3355443 333443 345666666653 689
Q ss_pred EEEEeCCCCCcccc-----ccCEEEEcCC
Q 019775 131 LVSVTSVEGNALAA-----VCDMNVHLPV 154 (336)
Q Consensus 131 vi~IT~~~~s~l~~-----~ad~~i~~~~ 154 (336)
+|.+|+........ -++..+.-|.
T Consensus 79 ii~~s~~~~~~~~~~~~~~Ga~~~l~KP~ 107 (122)
T 3gl9_A 79 VIVLTAKGGEEDESLALSLGARKVMRKPF 107 (122)
T ss_dssp EEEEESCCSHHHHHHHHHTTCSEEEESSC
T ss_pred EEEEecCCchHHHHHHHhcChhhhccCCC
Confidence 99999876544322 2455555444
No 242
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=67.07 E-value=22 Score=25.66 Aligned_cols=82 Identities=6% Similarity=0.004 Sum_probs=52.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCc--HHHHHHHHHHHHc--CCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT--EELLKVVPCAKAK--GAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~--~~~~~~~~~ak~~--g~~ 130 (336)
.+|.++.- .......+...|...|..+....+.......+... +-|++| +...-.. .+-.++++.+++. +++
T Consensus 7 ~~ilivdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlvi-~D~~l~~~~~~g~~~~~~l~~~~~~~~ 82 (136)
T 3kto_A 7 PIIYLVDH--QKDARAALSKLLSPLDVTIQCFASAESFMRQQISD-DAIGMI-IEAHLEDKKDSGIELLETLVKRGFHLP 82 (136)
T ss_dssp CEEEEECS--CHHHHHHHHHHHTTSSSEEEEESSHHHHTTSCCCT-TEEEEE-EETTGGGBTTHHHHHHHHHHHTTCCCC
T ss_pred CeEEEEcC--CHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhcc-CCCEEE-EeCcCCCCCccHHHHHHHHHhCCCCCC
Confidence 37777753 44566777788888899988777665544433322 234444 3433223 4556777777775 578
Q ss_pred EEEEeCCCCC
Q 019775 131 LVSVTSVEGN 140 (336)
Q Consensus 131 vi~IT~~~~s 140 (336)
+|.+|+....
T Consensus 83 ii~~s~~~~~ 92 (136)
T 3kto_A 83 TIVMASSSDI 92 (136)
T ss_dssp EEEEESSCCH
T ss_pred EEEEEcCCCH
Confidence 9999987654
No 243
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=66.89 E-value=11 Score=28.06 Aligned_cols=80 Identities=18% Similarity=0.230 Sum_probs=43.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccccc---------ccC-----------CCCCCcEEEEEeCCCCc
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHG---------DIG-----------ILSSDDILVMFSKSGNT 114 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~---------~~~-----------~~~~~dlvi~iS~sG~~ 114 (336)
++|.++|.|. ++..++..|...|.++..+........ ... .+.+-|++ +...+..
T Consensus 8 ~~viIiG~G~---~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~v--i~~~~~~ 82 (140)
T 3fwz_A 8 NHALLVGYGR---VGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWL--ILTIPNG 82 (140)
T ss_dssp SCEEEECCSH---HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEE--EECCSCH
T ss_pred CCEEEECcCH---HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEE--EEECCCh
Confidence 5899999986 344555566667777776652111100 000 12223433 3334444
Q ss_pred HHHHHHHHHHHHc--CCeEEEEeCCCC
Q 019775 115 EELLKVVPCAKAK--GAYLVSVTSVEG 139 (336)
Q Consensus 115 ~~~~~~~~~ak~~--g~~vi~IT~~~~ 139 (336)
.....++..+++. ++++|+.+++..
T Consensus 83 ~~n~~~~~~a~~~~~~~~iiar~~~~~ 109 (140)
T 3fwz_A 83 YEAGEIVASARAKNPDIEIIARAHYDD 109 (140)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEESSHH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 5555555666664 567887776543
No 244
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=65.87 E-value=8 Score=29.79 Aligned_cols=77 Identities=14% Similarity=0.092 Sum_probs=43.3
Q ss_pred EeccchHHHHHHHHHHHHhcCCeeeecCCcc-ccccccCCCCCCcEEEEEeC--CCCcHHHHHHHHHHHH---cCCeEEE
Q 019775 60 TGVGKSGFVANKISQTLISLGIKSGFLNPLD-ALHGDIGILSSDDILVMFSK--SGNTEELLKVVPCAKA---KGAYLVS 133 (336)
Q Consensus 60 ~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~~~dlvi~iS~--sG~~~~~~~~~~~ak~---~g~~vi~ 133 (336)
-..|++..+|+.++..+...|..+..++-.. ........+.+.|.+|+-|- .|..+. ...++.... .|-++.+
T Consensus 9 S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p~-~~fl~~l~~~~l~gk~v~~ 87 (161)
T 3hly_A 9 SDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAVDPQELIEAVSSARGIVLGTPPSQPSEAV-ATALSTIFAAAHNKQAIGL 87 (161)
T ss_dssp TTSTTHHHHHHHHHHHHHHTTCCEEEEETTTCCHHHHHHHHHHCSEEEEECCBSSCCHHH-HHHHHHHHHHCCTTSEEEE
T ss_pred CCChHHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHhCCEEEEEcCCcCCchhH-HHHHHHHHhhhhCCCEEEE
Confidence 3458899999999999999888776554211 11111112234555555433 344443 455555543 5666666
Q ss_pred EeCC
Q 019775 134 VTSV 137 (336)
Q Consensus 134 IT~~ 137 (336)
+.+.
T Consensus 88 fgs~ 91 (161)
T 3hly_A 88 FDSY 91 (161)
T ss_dssp ECCC
T ss_pred EEcC
Confidence 6543
No 245
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=65.87 E-value=23 Score=27.48 Aligned_cols=46 Identities=7% Similarity=0.042 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchH-HHHHHHHHHHHhcCCeeeec
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSG-FVANKISQTLISLGIKSGFL 86 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~ 86 (336)
.++++++++|.+|++-+++.|.|... .....+.....+.|.++...
T Consensus 22 ~~v~~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t 68 (170)
T 3cf4_G 22 VSPEMAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAAT 68 (170)
T ss_dssp CCHHHHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEEC
Confidence 35899999999997677777777543 44455555555668888653
No 246
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=65.20 E-value=13 Score=35.21 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=50.5
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+.+.+ ..|..+|+..+.+.+.......-.-....|..=+=+.-|...+..++++.|+++|++||+
T Consensus 42 Gdl~gi~~~L-dyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~Vil 111 (570)
T 1m53_A 42 GDIRGIIEKL-DYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMI 111 (570)
T ss_dssp CCHHHHHHTH-HHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHH-HHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4444566665 688899999999887655432212234455555557779999999999999999999883
No 247
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=65.10 E-value=16 Score=34.51 Aligned_cols=70 Identities=21% Similarity=0.278 Sum_probs=50.1
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
.|.=..+.+.+ ..|..+|+..+.+.+.......-.-.+..|..=+=+.-|...+..++++.|+++|++||
T Consensus 28 ~Gdl~gi~~~L-dyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~Vi 97 (557)
T 1zja_A 28 IGDFKGLTEKL-DYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLM 97 (557)
T ss_dssp SCCHHHHHHTH-HHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCHHHHHHHH-HHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 35545666665 78889999999988765543211123344555455667889999999999999999988
No 248
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=65.00 E-value=16 Score=33.98 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=24.2
Q ss_pred HHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 50 LLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
..+- ++|+|+|.|.|...+ ++..|...|..|....
T Consensus 19 ~~~~-~~v~viGiG~sG~s~--~A~~l~~~G~~V~~~D 53 (494)
T 4hv4_A 19 MRRV-RHIHFVGIGGAGMGG--IAEVLANEGYQISGSD 53 (494)
T ss_dssp ---C-CEEEEETTTSTTHHH--HHHHHHHTTCEEEEEC
T ss_pred hccC-CEEEEEEEcHhhHHH--HHHHHHhCCCeEEEEE
Confidence 3455 599999999998754 2456677788887665
No 249
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=64.85 E-value=18 Score=26.03 Aligned_cols=82 Identities=12% Similarity=0.041 Sum_probs=51.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcC-CeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLG-IKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~ 130 (336)
.+|.++. ........+...|...| ..+....+.......+... +-|++|+ +..++. +-.++++.+++. +++
T Consensus 15 ~~ilivd--d~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~-~~dlvi~D~~l~~~--~g~~~~~~l~~~~~~~~ 89 (135)
T 3snk_A 15 KQVALFS--SDPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADT-RPGIVILDLGGGDL--LGKPGIVEARALWATVP 89 (135)
T ss_dssp EEEEEEC--SCHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTC-CCSEEEEEEETTGG--GGSTTHHHHHGGGTTCC
T ss_pred cEEEEEc--CCHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhcc-CCCEEEEeCCCCCc--hHHHHHHHHHhhCCCCc
Confidence 3677765 34566777788888889 8888777766655444433 3455444 444443 334455555554 589
Q ss_pred EEEEeCCCCCc
Q 019775 131 LVSVTSVEGNA 141 (336)
Q Consensus 131 vi~IT~~~~s~ 141 (336)
+|.+|+.....
T Consensus 90 ii~~s~~~~~~ 100 (135)
T 3snk_A 90 LIAVSDELTSE 100 (135)
T ss_dssp EEEEESCCCHH
T ss_pred EEEEeCCCCHH
Confidence 99999876543
No 250
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=63.41 E-value=34 Score=29.72 Aligned_cols=82 Identities=17% Similarity=0.104 Sum_probs=56.7
Q ss_pred eEEEEeccchHHHHHHHHHHHHh-cC-CeeeecCCccccccccCCCCCCcEEEEEeCCCC-cHH---HHHHHHHHHHcCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLIS-LG-IKSGFLNPLDALHGDIGILSSDDILVMFSKSGN-TEE---LLKVVPCAKAKGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~-~g-~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-~~~---~~~~~~~ak~~g~ 129 (336)
.+.+|+..++..+|+.++..|.. ++ ..+.-+++++.......+....|++|+-|.++. +.. ++-++..|++.++
T Consensus 9 ~~~i~~~~~~~~la~~ia~~lg~~l~~~~~~~F~dGE~~v~i~e~vrg~dv~iiqs~~~~~nd~lmell~~~~a~~~~~a 88 (317)
T 1dku_A 9 NLKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASA 88 (317)
T ss_dssp CEEEEECSSCHHHHHHHHHHHTCCCCCEEEEECTTSCEEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEECCCCHHHHHHHHHHhCCeeEeeEEEECCCCCEEEEecCCCCCCEEEEEcCCCCCCcHHHHHHHHHHHHhhccCc
Confidence 57888888888999999988873 33 333446677766666667777899998888765 344 4444567777777
Q ss_pred e-EEEEeCC
Q 019775 130 Y-LVSVTSV 137 (336)
Q Consensus 130 ~-vi~IT~~ 137 (336)
+ +.++..+
T Consensus 89 ~~i~av~pY 97 (317)
T 1dku_A 89 KTINIVIPY 97 (317)
T ss_dssp SEEEEEESS
T ss_pred ceEEEEEEc
Confidence 4 5555544
No 251
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=63.32 E-value=25 Score=26.03 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=54.9
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHH--cCCeE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKA--KGAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~--~g~~v 131 (336)
.+|.++. ........+...|...|..+....+.......+... +-|++|+= ..++ .+-.++++.+++ .++++
T Consensus 4 ~~ILivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dliild~~l~~--~~g~~~~~~l~~~~~~~pi 78 (155)
T 1qkk_A 4 PSVFLID--DDRDLRKAMQQTLELAGFTVSSFASATEALAGLSAD-FAGIVISDIRMPG--MDGLALFRKILALDPDLPM 78 (155)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTT-CCSEEEEESCCSS--SCHHHHHHHHHHHCTTSCE
T ss_pred CEEEEEe--CCHHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhC-CCCEEEEeCCCCC--CCHHHHHHHHHhhCCCCCE
Confidence 3677765 344566677777788899988777666554444332 34554443 3333 223455555555 36899
Q ss_pred EEEeCCCCCcc-----ccccCEEEEcCC
Q 019775 132 VSVTSVEGNAL-----AAVCDMNVHLPV 154 (336)
Q Consensus 132 i~IT~~~~s~l-----~~~ad~~i~~~~ 154 (336)
|++|+...... ..-++.++.-|.
T Consensus 79 i~ls~~~~~~~~~~~~~~g~~~~l~kP~ 106 (155)
T 1qkk_A 79 ILVTGHGDIPMAVQAIQDGAYDFIAKPF 106 (155)
T ss_dssp EEEECGGGHHHHHHHHHTTCCEEEESSC
T ss_pred EEEECCCChHHHHHHHhcCCCeEEeCCC
Confidence 99998765432 222455555444
No 252
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=62.80 E-value=15 Score=32.80 Aligned_cols=82 Identities=16% Similarity=0.142 Sum_probs=54.9
Q ss_pred CeEEEEeccchHHHHHH---HHHHHH-hcCC-eeeecCCccccccccCCCCCCcEEEEEeCCCC-cH---HHHHHHHHHH
Q 019775 55 GTIFFTGVGKSGFVANK---ISQTLI-SLGI-KSGFLNPLDALHGDIGILSSDDILVMFSKSGN-TE---ELLKVVPCAK 125 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~---~~~~l~-~~g~-~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-~~---~~~~~~~~ak 125 (336)
+.+.+|+..++..+|+. ++.+|. .++. .+.-+++++.......+....|++|+-|.++. +. +++-++..+|
T Consensus 28 ~~~~if~g~~~~~la~~~~~ia~~lg~~l~~~~~~~F~dGE~~v~i~esvrg~dV~iiqs~~~~~nd~lmeLl~~idA~k 107 (379)
T 2ji4_A 28 GGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACK 107 (379)
T ss_dssp -CCEEEECCCSGGGGHHHHHHHHHHTCCCCCEEEEECTTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHhHHHHHHHhCCceEeeEEEECCCCCEEEEeCCCcCCCEEEEEeCCCCCccHHHHHHHHHHHHHH
Confidence 46778887777778887 777775 3443 33446677666555567778899999888874 33 3455567888
Q ss_pred HcCCeEE-EEeC
Q 019775 126 AKGAYLV-SVTS 136 (336)
Q Consensus 126 ~~g~~vi-~IT~ 136 (336)
+.+++-| +|-.
T Consensus 108 ~asA~rit~ViP 119 (379)
T 2ji4_A 108 TSCAKSIIGVIP 119 (379)
T ss_dssp HTTCSEEEEECS
T ss_pred hcCCceEEEEEe
Confidence 8888754 4443
No 253
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=62.38 E-value=17 Score=29.18 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=39.7
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH--cCCeEE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA--KGAYLV 132 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~--~g~~vi 132 (336)
.+|-|+|.|. ++..++..|.+.|.++..+..... .+.+-|++|+.-. +..+.++++.... ++..++
T Consensus 20 ~~I~iiG~G~---mG~~la~~l~~~g~~V~~~~~~~~------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~~~~vi 87 (209)
T 2raf_A 20 MEITIFGKGN---MGQAIGHNFEIAGHEVTYYGSKDQ------ATTLGEIVIMAVP---YPALAALAKQYATQLKGKIVV 87 (209)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEECTTCC------CSSCCSEEEECSC---HHHHHHHHHHTHHHHTTSEEE
T ss_pred CEEEEECCCH---HHHHHHHHHHHCCCEEEEEcCCHH------HhccCCEEEEcCC---cHHHHHHHHHHHHhcCCCEEE
Confidence 4899999875 455556667777888877753322 3445576655443 3334444443321 255555
Q ss_pred EEeC
Q 019775 133 SVTS 136 (336)
Q Consensus 133 ~IT~ 136 (336)
.+++
T Consensus 88 ~~~~ 91 (209)
T 2raf_A 88 DITN 91 (209)
T ss_dssp ECCC
T ss_pred EECC
Confidence 5544
No 254
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=62.34 E-value=23 Score=25.13 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=49.6
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++. ........+...|...|..+....+.......+....+-|++|+= ..++ ..+-.++++.+++. ++++|
T Consensus 7 ~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~-~~~g~~~~~~l~~~~~~~~ii 83 (132)
T 2rdm_A 7 TILLAD--DEAILLLDFESTLTDAGFLVTAVSSGAKAIEMLKSGAAIDGVVTDIRFCQ-PPDGWQVARVAREIDPNMPIV 83 (132)
T ss_dssp EEEEEC--SSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCCEEEEESCCSS-SSCHHHHHHHHHHHCTTCCEE
T ss_pred eEEEEc--CcHHHHHHHHHHHHHcCCEEEEECCHHHHHHHHHcCCCCCEEEEeeeCCC-CCCHHHHHHHHHhcCCCCCEE
Confidence 677765 344566677777778899888777655544333333234655443 3332 02234555555543 68999
Q ss_pred EEeCCCCCcc
Q 019775 133 SVTSVEGNAL 142 (336)
Q Consensus 133 ~IT~~~~s~l 142 (336)
.+|+......
T Consensus 84 ~~s~~~~~~~ 93 (132)
T 2rdm_A 84 YISGHAALEW 93 (132)
T ss_dssp EEESSCCTTH
T ss_pred EEeCCccHHH
Confidence 9998766543
No 255
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=61.88 E-value=23 Score=32.14 Aligned_cols=70 Identities=20% Similarity=0.183 Sum_probs=50.9
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+.+.+ ..|..+|+..+.+.+....... .-....|..=+=+.-|...+..++++.|+++|++||+
T Consensus 19 ~Gd~~gi~~~L-dyL~~LGv~~I~L~Pi~~~~~~-~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~Vil 88 (441)
T 1lwj_A 19 VGDFRGLKNAV-SYLKELGIDFVWLMPVFSSISF-HGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVL 88 (441)
T ss_dssp SCCHHHHHHTH-HHHHHTTCCEEEECCCEECSSS-SCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCHHHHHHhh-HHHHHcCCCEEEeCCCcCCCCC-CCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 45555666665 6889999999998876554322 1234455555557778899999999999999999883
No 256
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=61.42 E-value=15 Score=34.52 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=50.7
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+.+.+ ..|..+|+..+.+.+.......-.-....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 27 ~Gdl~gi~~~L-dyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~Vil 97 (543)
T 2zic_A 27 IGDLKGITSKL-DYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIM 97 (543)
T ss_dssp SCCHHHHHHTH-HHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCHHHHHHHH-HHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 35545566655 678899999999887655332111234455555557778899999999999999999883
No 257
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=61.07 E-value=43 Score=24.05 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=60.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHh-cCCeeeecCCccccccccCCCCCCcEEEEEeCCCC-cHHHHHHHHHHHH----cC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLIS-LGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN-TEELLKVVPCAKA----KG 128 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-~~~~~~~~~~ak~----~g 128 (336)
.+|.++. ........+...|.. .|..+....+.......+....+-|++|+ ...-. ..+-.++++.+++ .+
T Consensus 5 ~~ilivd--d~~~~~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~~~~~~dlvi~-D~~l~~~~~g~~~~~~l~~~~~~~~ 81 (140)
T 3lua_A 5 GTVLLID--YFEYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIM-DIAFPVEKEGLEVLSAIRNNSRTAN 81 (140)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHHCCCEEEEECSHHHHHTTTTTCCCCSEEEE-CSCSSSHHHHHHHHHHHHHSGGGTT
T ss_pred CeEEEEe--CCHHHHHHHHHHHHhccCccEEEECCHHHHHHHHhcCCCCcEEEE-eCCCCCCCcHHHHHHHHHhCcccCC
Confidence 3677765 344556667777777 79999888776665544433134465544 33333 4556677777776 57
Q ss_pred CeEEEEeCCCCCccc-----cccCEEEEcCCC
Q 019775 129 AYLVSVTSVEGNALA-----AVCDMNVHLPVE 155 (336)
Q Consensus 129 ~~vi~IT~~~~s~l~-----~~ad~~i~~~~~ 155 (336)
+++|.+|+....... .-++.++.-|..
T Consensus 82 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~ 113 (140)
T 3lua_A 82 TPVIIATKSDNPGYRHAALKFKVSDYILKPYP 113 (140)
T ss_dssp CCEEEEESCCCHHHHHHHHHSCCSEEEESSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 899999987654332 224555555543
No 258
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=60.79 E-value=11 Score=32.01 Aligned_cols=55 Identities=15% Similarity=0.182 Sum_probs=44.8
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
+.+-|++|++-.|+...-...++..++++|++++.|-. ...+....+|+.|.-+.
T Consensus 210 ~~~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~-~~t~~d~~~~~~i~g~~ 264 (273)
T 3riy_A 210 LAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNT-ETTPATNRFRFHFQGPC 264 (273)
T ss_dssp HHHCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEES-SCCTTGGGSSEEEESCH
T ss_pred HhcCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECC-CCCCCCcceeEEEeCCH
Confidence 45679999999999987777888888999999988875 56777889999987543
No 259
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=60.52 E-value=12 Score=31.05 Aligned_cols=55 Identities=24% Similarity=0.190 Sum_probs=42.3
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
+.+-|++|++-.|+...-...+...++++|+++|.|-.. ..+....+|+.|.-+.
T Consensus 165 ~~~adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~-~t~~~~~~~~~i~~~~ 219 (235)
T 1s5p_A 165 LSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLE-PSQVGNEFAEKYYGPA 219 (235)
T ss_dssp HHHCSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESS-SCC---CCSEEEESCH
T ss_pred HhcCCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECC-CCCCCccccEEEeCCH
Confidence 445699999999999877788889999999999988754 5667778888877644
No 260
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=60.49 E-value=15 Score=34.64 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=50.0
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
.|.=..+.+.+ ..|..+|+..+.+.+.......-.-....|..=+=+.-|...+..++++.|+++|++||
T Consensus 27 ~Gdl~gi~~~l-dyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~Vi 96 (558)
T 1uok_A 27 IGDLRGIISKL-DYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLM 96 (558)
T ss_dssp SCCHHHHHTTH-HHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHH-HHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 35445555655 67889999999988755543221223445555555677889999999999999999988
No 261
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=60.18 E-value=18 Score=34.05 Aligned_cols=70 Identities=14% Similarity=0.284 Sum_probs=50.0
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
.|.=..+.+.+ ..|..+|+..+.+.+.......-.-....|..=+=+.-|...+..++++.|+++|++||
T Consensus 27 ~Gd~~gi~~~l-dyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vi 96 (555)
T 2ze0_A 27 IGDLRGIIEKL-DYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVI 96 (555)
T ss_dssp SCCHHHHHHTH-HHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHH-HHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 35545566665 68889999999988755433211223445555555677889999999999999999988
No 262
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=60.13 E-value=30 Score=27.63 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=46.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHH------HHHHHHcC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKV------VPCAKAKG 128 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~------~~~ak~~g 128 (336)
++|.++=+|.... ..+.+.|.++|..+....+.+.+. .-|.+| +.-.|.+.+..+. ++.++++|
T Consensus 3 ~~I~iiD~g~~n~--~si~~al~~~G~~~~v~~~~~~l~-------~~D~li-lPG~g~~~~~~~~~~~~~~i~~~~~~~ 72 (211)
T 4gud_A 3 QNVVIIDTGCANI--SSVKFAIERLGYAVTISRDPQVVL-------AADKLF-LPGVGTASEAMKNLTERDLIELVKRVE 72 (211)
T ss_dssp CCEEEECCCCTTH--HHHHHHHHHTTCCEEEECCHHHHH-------HCSEEE-ECCCSCHHHHHHHHHHTTCHHHHHHCC
T ss_pred CEEEEEECCCChH--HHHHHHHHHCCCEEEEECCHHHHh-------CCCEEE-ECCCCCHHHHHHHHHhcChHHHHHHcC
Confidence 3688877665431 224456788999998876554432 224444 4666766654433 56778899
Q ss_pred CeEEEEeC
Q 019775 129 AYLVSVTS 136 (336)
Q Consensus 129 ~~vi~IT~ 136 (336)
.+++.|+-
T Consensus 73 ~PvlGICl 80 (211)
T 4gud_A 73 KPLLGICL 80 (211)
T ss_dssp SCEEEETH
T ss_pred CCEEEEch
Confidence 99999985
No 263
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=59.82 E-value=19 Score=29.41 Aligned_cols=96 Identities=9% Similarity=0.074 Sum_probs=63.0
Q ss_pred CeEEEEeccchH------HHHHHHHHHHHhcCCeeeecC--CccccccccCC--CCCCcEEEEEeCCCCcHHHHHHHHHH
Q 019775 55 GTIFFTGVGKSG------FVANKISQTLISLGIKSGFLN--PLDALHGDIGI--LSSDDILVMFSKSGNTEELLKVVPCA 124 (336)
Q Consensus 55 ~~I~i~G~G~s~------~~a~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~--~~~~dlvi~iS~sG~~~~~~~~~~~a 124 (336)
+||.++|.|.-- .+.+.=.+.++...+.+-.++ .-..+...... --+.--+++++.|=--.++-++++..
T Consensus 88 krvii~gggaqv~qva~gai~eadrhnirgerisvdt~p~vge~~l~~av~av~~lpr~~~lvlags~mgg~i~~~v~~~ 167 (223)
T 1y7p_A 88 KRVIILGGGALVSQVAIGAISEADRHNLRGERISVDTMPVVGEEEIAEAVKAVSRLHRAEVLVLAGGIMGGKITEEVKKL 167 (223)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTSCCEEEEEEECCSHHHHHHHHHHGGGSTTEEEEEEESSBCCTHHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHhhcchhhhcccccceeeeecceecCHHHHHHHHHHHhhccccceeeEecccccchHHHHHHHH
Confidence 499999988632 233333444554455555444 33333222111 12566677888888888999999999
Q ss_pred HHcCCeEEEEeCCCCCccccccCEEEEc
Q 019775 125 KAKGAYLVSVTSVEGNALAAVCDMNVHL 152 (336)
Q Consensus 125 k~~g~~vi~IT~~~~s~l~~~ad~~i~~ 152 (336)
|+.|.++|++-. .+.+-+.||.++.=
T Consensus 168 ~~~~i~vi~l~m--~gsv~~~~dlvv~d 193 (223)
T 1y7p_A 168 RKSGIRVISLSM--FGSVPDVADVVISD 193 (223)
T ss_dssp GGGTCEEEEESC--BSSHHHHSSEEESS
T ss_pred HHCCCeEEEecC--CCCccccccEEecC
Confidence 999999998864 55667899998653
No 264
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=59.74 E-value=38 Score=24.60 Aligned_cols=84 Identities=12% Similarity=-0.024 Sum_probs=52.1
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcC-CeeeecCCccccccccCCC-CCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLG-IKSGFLNPLDALHGDIGIL-SSDDILVMFSKSGNTEELLKVVPCAKAK--GAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~-~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~ 130 (336)
.+|.++.- .......+...|...| ..+....+.......+..- .+-|++|+ ...-...+-.++++.+++. +++
T Consensus 21 ~~ilivdd--~~~~~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~-D~~l~~~~g~~~~~~l~~~~~~~~ 97 (146)
T 4dad_A 21 INILVASE--DASRLAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMI-DGAALDTAELAAIEKLSRLHPGLT 97 (146)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEE-ECTTCCHHHHHHHHHHHHHCTTCE
T ss_pred CeEEEEeC--CHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEE-eCCCCCccHHHHHHHHHHhCCCCc
Confidence 47877753 3455667777788888 8888777655333222221 34565544 4433345566777776665 579
Q ss_pred EEEEeCCCCCc
Q 019775 131 LVSVTSVEGNA 141 (336)
Q Consensus 131 vi~IT~~~~s~ 141 (336)
+|++|+.....
T Consensus 98 ii~lt~~~~~~ 108 (146)
T 4dad_A 98 CLLVTTDASSQ 108 (146)
T ss_dssp EEEEESCCCHH
T ss_pred EEEEeCCCCHH
Confidence 99999876543
No 265
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=59.41 E-value=34 Score=27.11 Aligned_cols=71 Identities=13% Similarity=0.245 Sum_probs=47.3
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHH---------HHHHHHHHHH
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEE---------LLKVVPCAKA 126 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~---------~~~~~~~ak~ 126 (336)
+|.++-.|.+.. ..+...|.+.|..+..+++.. .+..-|.+|+ +-+|.... ..+.++.+.+
T Consensus 4 ~I~iid~~~~~~--~~~~~~l~~~G~~~~~~~~~~-------~l~~~d~lil-~G~g~~~~~~~~l~~~~~~~~i~~~~~ 73 (200)
T 1ka9_H 4 KALLIDYGSGNL--RSAAKALEAAGFSVAVAQDPK-------AHEEADLLVL-PGQGHFGQVMRAFQESGFVERVRRHLE 73 (200)
T ss_dssp EEEEECSSCSCH--HHHHHHHHHTTCEEEEESSTT-------SCSSCSEEEE-CCCSCHHHHHHTTSSSCTHHHHHHHHH
T ss_pred EEEEEeCCCccH--HHHHHHHHHCCCeEEEecChH-------HcccCCEEEE-CCCCcHHHHHHHHHhcCHHHHHHHHHH
Confidence 677887663332 224677788899888876422 2334466665 76676533 4677788778
Q ss_pred cCCeEEEEeC
Q 019775 127 KGAYLVSVTS 136 (336)
Q Consensus 127 ~g~~vi~IT~ 136 (336)
+|.++++|+-
T Consensus 74 ~~~PilGIC~ 83 (200)
T 1ka9_H 74 RGLPFLGICV 83 (200)
T ss_dssp TTCCEEECTH
T ss_pred cCCeEEEEcH
Confidence 9999999985
No 266
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=59.23 E-value=23 Score=33.71 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=50.3
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+.+.+ ..|..+|+..+.+.+.......-.-....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 36 ~Gdl~gi~~~L-dyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~Vil 106 (589)
T 3aj7_A 36 WGDMKGIASKL-EYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFIT 106 (589)
T ss_dssp SCCHHHHHHTH-HHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCHHHHHHHH-HHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEE
Confidence 34444555555 678899999999887555332111234455555557778899999999999999999883
No 267
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=58.92 E-value=25 Score=25.39 Aligned_cols=83 Identities=8% Similarity=0.040 Sum_probs=50.6
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH----cCCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA----KGAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~----~g~~ 130 (336)
.+|.++. ........+...|...|..+....+.......+... +-|++|+ ...-...+-.++++.+++ .+++
T Consensus 8 ~~iLivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlii~-d~~l~~~~g~~~~~~l~~~~~~~~~p 83 (142)
T 3cg4_A 8 GDVMIVD--DDAHVRIAVKTILSDAGFHIISADSGGQCIDLLKKG-FSGVVLL-DIMMPGMDGWDTIRAILDNSLEQGIA 83 (142)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTC-CCEEEEE-ESCCSSSCHHHHHHHHHHTTCCTTEE
T ss_pred CeEEEEc--CCHHHHHHHHHHHHHCCeEEEEeCCHHHHHHHHHhc-CCCEEEE-eCCCCCCCHHHHHHHHHhhcccCCCC
Confidence 4677765 445667777777888899888777665544333332 3355444 332222334566666666 4578
Q ss_pred EEEEeCCCCCc
Q 019775 131 LVSVTSVEGNA 141 (336)
Q Consensus 131 vi~IT~~~~s~ 141 (336)
+|++|+.....
T Consensus 84 ii~~s~~~~~~ 94 (142)
T 3cg4_A 84 IVMLTAKNAPD 94 (142)
T ss_dssp EEEEECTTCCC
T ss_pred EEEEECCCCHH
Confidence 99999876543
No 268
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=58.79 E-value=20 Score=33.46 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=47.5
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+.+.+ ..|..+|+.++.+.+.........-....|..=+=..=|...+..++++.|+++|++||+
T Consensus 29 Gdl~Gi~~kL-dYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~Vil 98 (549)
T 4aie_A 29 GDLQGIISRL-DYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVM 98 (549)
T ss_dssp CCHHHHHTTH-HHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHhh-HHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4444555554 578899999998887554322111223344444445568889999999999999999884
No 269
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=58.35 E-value=41 Score=23.64 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=55.1
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHHc----CCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKAK----GAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~~----g~~ 130 (336)
+|.++. ........+...|...|..+....+.......+... +-|++|+= ..++ .+-.++++.+++. +++
T Consensus 5 ~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlii~D~~l~~--~~g~~~~~~l~~~~~~~~~~ 79 (127)
T 3i42_A 5 QALIVE--DYQAAAETFKELLEMLGFQADYVMSGTDALHAMSTR-GYDAVFIDLNLPD--TSGLALVKQLRALPMEKTSK 79 (127)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTEEEEEESSHHHHHHHHHHS-CCSEEEEESBCSS--SBHHHHHHHHHHSCCSSCCE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHcCCCEEEECCHHHHHHHHHhc-CCCEEEEeCCCCC--CCHHHHHHHHHhhhccCCCC
Confidence 566654 344566677777888888888777665544333333 23554432 3343 3345666666654 579
Q ss_pred EEEEeCCCCCcc----ccccCEEEEcCCC
Q 019775 131 LVSVTSVEGNAL----AAVCDMNVHLPVE 155 (336)
Q Consensus 131 vi~IT~~~~s~l----~~~ad~~i~~~~~ 155 (336)
+|++|+...... ..-++.++.-|..
T Consensus 80 ii~~s~~~~~~~~~~~~~g~~~~l~KP~~ 108 (127)
T 3i42_A 80 FVAVSGFAKNDLGKEACELFDFYLEKPID 108 (127)
T ss_dssp EEEEECC-CTTCCHHHHHHCSEEEESSCC
T ss_pred EEEEECCcchhHHHHHHHhhHHheeCCCC
Confidence 999998766543 2224555555443
No 270
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=58.31 E-value=51 Score=27.92 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 118 LKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 118 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
...++.+.+.|+++..|+++.-+.+-+..|.+|.-..
T Consensus 150 ~~~a~~L~~~gI~vtli~dsa~~~~m~~vd~vivGAd 186 (276)
T 1vb5_A 150 LHLARELEFSGIEFEVITDAQMGLFCREASIAIVGAD 186 (276)
T ss_dssp HHHHHHHHHTTCCEEEECGGGHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHCCCCEEEEcHHHHHHHHccCCEEEEccc
Confidence 5566777778999999999888888788999987544
No 271
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=58.26 E-value=18 Score=32.12 Aligned_cols=54 Identities=22% Similarity=0.164 Sum_probs=41.7
Q ss_pred CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCc---cccccCEEEEcCC
Q 019775 98 ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNA---LAAVCDMNVHLPV 154 (336)
Q Consensus 98 ~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~---l~~~ad~~i~~~~ 154 (336)
..+.+++.|++=.|| . -..+++.||+.|.++++++.+.+.| -.++||..+..+.
T Consensus 13 ~~~~~~~~I~ilGs~-l--~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d~ 69 (361)
T 2r7k_A 13 KYNKDEITIATLGSH-T--SLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVDN 69 (361)
T ss_dssp TSCTTSCEEEEESST-T--HHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECSS
T ss_pred hccccCCEEEEECcH-H--HHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECCC
Confidence 344456667777777 3 3448899999999999999998877 6678999888763
No 272
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=57.96 E-value=24 Score=27.13 Aligned_cols=82 Identities=11% Similarity=0.094 Sum_probs=47.4
Q ss_pred CeEEEEeccchH--HHHHHHHHHHHhcCCeeeecCC---ccccccccCCCCCCcEEEEEeC-CCCcHHHHHHHHHHHHcC
Q 019775 55 GTIFFTGVGKSG--FVANKISQTLISLGIKSGFLNP---LDALHGDIGILSSDDILVMFSK-SGNTEELLKVVPCAKAKG 128 (336)
Q Consensus 55 ~~I~i~G~G~s~--~~a~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~~~~dlvi~iS~-sG~~~~~~~~~~~ak~~g 128 (336)
.+|++.-.|.-. .=+..++..|...|..++.+.. .+.+....... .-|++.+-+. ..+-..+.++++.+++.|
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~-~~diV~lS~~~~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQE-DVDVIGVSILNGAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHT-TCSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhc-CCCEEEEEeechhhHHHHHHHHHHHHhcC
Confidence 477666555533 4456667777788999998763 33333323223 3344443333 444466788888999987
Q ss_pred C--eEEEEeCC
Q 019775 129 A--YLVSVTSV 137 (336)
Q Consensus 129 ~--~vi~IT~~ 137 (336)
. ..|.+-+.
T Consensus 98 ~~~i~v~vGG~ 108 (161)
T 2yxb_A 98 ADDIPVVLGGT 108 (161)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCEEEEeCC
Confidence 4 23444444
No 273
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=57.87 E-value=16 Score=27.99 Aligned_cols=89 Identities=24% Similarity=0.278 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCCeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCcccc-------------ccccCCCCCCcEEEEEe
Q 019775 44 LTFTQTLLKCRGTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDAL-------------HGDIGILSSDDILVMFS 109 (336)
Q Consensus 44 ~~~~~~i~~a~~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~-------------~~~~~~~~~~dlvi~iS 109 (336)
..+-+.+..+ ++|.++|+ |.+.+.|+-|+|..+. ++.+++++.+.- .....+ ..-|+++++-
T Consensus 17 ~~Fk~~v~~~-~kIvf~Gs~GvCtPFaeL~~YaiR~--~~~~FiP~~d~e~a~~l~~~~~G~~~~~~~~-~~~D~vVllG 92 (157)
T 2r47_A 17 GVFREAVKDA-ERIGFAGVPGVCTPFAQLFAYAVRD--KDNIFIPNTDFSKARKLEVTEYGVELGEISP-GNVDVLVLLG 92 (157)
T ss_dssp HHHHHHTTTC-SEEEEEECTTTTHHHHHHHHHHTTT--SEEEEEETTCGGGCEEEEEETTEEEEEEECC-CCEEEEEEEG
T ss_pred HHHHHHhcCC-CeEEEECCCeeecCHHhhheeeeeC--CceEEcCCCChhHceEEEEecCceEeccccC-CCCCEEEEec
Confidence 3344445567 59999998 8899999999999998 677776642221 111111 3457777764
Q ss_pred -----CCCCcHH-HHHHHHHHHHcCCeEEEEeC
Q 019775 110 -----KSGNTEE-LLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 110 -----~sG~~~~-~~~~~~~ak~~g~~vi~IT~ 136 (336)
.+|-+++ +.++++..-+.+.++|.|+=
T Consensus 93 GLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 93 GLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp GGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh
Confidence 3555544 55556666445788999884
No 274
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=57.80 E-value=15 Score=31.99 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=43.5
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
+.+-|++|++-.|+...-...+...++.+|++++.|-. ...+....+|+.|.-.
T Consensus 204 ~~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~-~~t~~d~~adl~i~g~ 257 (318)
T 3k35_A 204 SRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNL-QPTKHDRHADLRIHGY 257 (318)
T ss_dssp HHTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECS-SCCTTGGGCSEEECSC
T ss_pred HhcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECC-CCCCCCCcccEEEeCC
Confidence 34679999999999988878888889999999877754 5667888999987643
No 275
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=57.60 E-value=15 Score=30.35 Aligned_cols=41 Identities=12% Similarity=-0.019 Sum_probs=37.2
Q ss_pred CCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCc
Q 019775 101 SDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNA 141 (336)
Q Consensus 101 ~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~ 141 (336)
+.|++|++|-.+-.+---.+-+..++.|.++|.||+.+.-.
T Consensus 64 ~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K 104 (283)
T 1qv9_A 64 EPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLK 104 (283)
T ss_dssp CCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGG
T ss_pred CCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchh
Confidence 57999999999999999999999999999999999986554
No 276
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=57.49 E-value=29 Score=31.68 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=25.1
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNP 88 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~ 88 (336)
++|+++|.|.|...+ +..|.+.|..|.....
T Consensus 10 k~v~viG~G~sG~s~---A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 10 KKVLVLGLARSGEAA---ARLLAKLGAIVTVNDG 40 (451)
T ss_dssp CEEEEECCTTTHHHH---HHHHHHTTCEEEEEES
T ss_pred CEEEEEeeCHHHHHH---HHHHHhCCCEEEEEeC
Confidence 599999999998754 6778888999887653
No 277
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=57.32 E-value=28 Score=24.93 Aligned_cols=82 Identities=9% Similarity=-0.003 Sum_probs=47.6
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~v 131 (336)
.+|.++.- .......+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++. .+++
T Consensus 4 ~~ilivdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~-~~dlvl~D~~l~~~~--g~~~~~~l~~~~~~~~i 78 (136)
T 1mvo_A 4 KKILVVDD--EESIVTLLQYNLERSGYDVITASDGEEALKKAETE-KPDLIVLDVMLPKLD--GIEVCKQLRQQKLMFPI 78 (136)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH-CCSEEEEESSCSSSC--HHHHHHHHHHTTCCCCE
T ss_pred CEEEEEEC--CHHHHHHHHHHHHHCCcEEEEecCHHHHHHHHhhc-CCCEEEEecCCCCCC--HHHHHHHHHcCCCCCCE
Confidence 36777653 34455666677777788887776655443333222 3355443 2334432 34566666654 5789
Q ss_pred EEEeCCCCCc
Q 019775 132 VSVTSVEGNA 141 (336)
Q Consensus 132 i~IT~~~~s~ 141 (336)
|.+|+.....
T Consensus 79 i~~s~~~~~~ 88 (136)
T 1mvo_A 79 LMLTAKDEEF 88 (136)
T ss_dssp EEEECTTCCC
T ss_pred EEEECCCCHH
Confidence 9999876654
No 278
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=57.31 E-value=36 Score=23.78 Aligned_cols=82 Identities=10% Similarity=0.077 Sum_probs=47.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH-cCCeEEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA-KGAYLVSV 134 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~-~g~~vi~I 134 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ ...-...+-.++++..++ .+.++|.+
T Consensus 4 ~ilivdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~-~~dlii~-D~~~p~~~g~~~~~~lr~~~~~~ii~~ 79 (120)
T 3f6p_A 4 KILVVDD--EKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEEL-QPDLILL-DIMLPNKDGVEVCREVRKKYDMPIIML 79 (120)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTT-CCSEEEE-ETTSTTTHHHHHHHHHHTTCCSCEEEE
T ss_pred eEEEEEC--CHHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHhhC-CCCEEEE-eCCCCCCCHHHHHHHHHhcCCCCEEEE
Confidence 6666653 34556667777788898888776655544333333 3455444 332222334555555554 46889999
Q ss_pred eCCCCCc
Q 019775 135 TSVEGNA 141 (336)
Q Consensus 135 T~~~~s~ 141 (336)
|+.....
T Consensus 80 t~~~~~~ 86 (120)
T 3f6p_A 80 TAKDSEI 86 (120)
T ss_dssp EESSCHH
T ss_pred ECCCChH
Confidence 9876553
No 279
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=57.11 E-value=51 Score=23.75 Aligned_cols=95 Identities=12% Similarity=0.055 Sum_probs=56.2
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCe--eeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH----cCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIK--SGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA----KGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~----~g~ 129 (336)
+|.++. ........+...|...|.. +....+.......+.. .+-|++| +...-...+-.++++.+++ .++
T Consensus 7 ~ILivd--d~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~-~~~dlii-~D~~l~~~~g~~~~~~lr~~~~~~~~ 82 (144)
T 3kht_A 7 RVLVVE--DNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQ-AKYDLII-LDIGLPIANGFEVMSAVRKPGANQHT 82 (144)
T ss_dssp EEEEEC--CCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTT-CCCSEEE-ECTTCGGGCHHHHHHHHHSSSTTTTC
T ss_pred EEEEEe--CCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhc-CCCCEEE-EeCCCCCCCHHHHHHHHHhcccccCC
Confidence 666665 3455667777888888887 6666665554433332 2345544 3443334455677777776 468
Q ss_pred eEEEEeCCCCCccc-----cccCEEEEcCC
Q 019775 130 YLVSVTSVEGNALA-----AVCDMNVHLPV 154 (336)
Q Consensus 130 ~vi~IT~~~~s~l~-----~~ad~~i~~~~ 154 (336)
++|++|+....... .-++.++.-|.
T Consensus 83 pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~ 112 (144)
T 3kht_A 83 PIVILTDNVSDDRAKQCMAAGASSVVDKSS 112 (144)
T ss_dssp CEEEEETTCCHHHHHHHHHTTCSEEEECCT
T ss_pred CEEEEeCCCCHHHHHHHHHcCCCEEEECCC
Confidence 99999987654432 22455555444
No 280
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=56.65 E-value=24 Score=32.48 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=47.8
Q ss_pred hHHHHHHHHHH----cCCCeEEEEeccch-HHHHHHHHHHHHhcCCeeeecCC---------------------ccc-cc
Q 019775 41 PHTLTFTQTLL----KCRGTIFFTGVGKS-GFVANKISQTLISLGIKSGFLNP---------------------LDA-LH 93 (336)
Q Consensus 41 ~~i~~~~~~i~----~a~~~I~i~G~G~s-~~~a~~~~~~l~~~g~~~~~~~~---------------------~~~-~~ 93 (336)
+.++++.+.+. .. ++|.++|.|.- +.+|+.+ .. +.++..+.. ... -.
T Consensus 219 ~~i~~~~~~~g~~~~~~-~~v~I~GgG~ig~~lA~~L----~~-~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~ 292 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPY-RRIMIVGGGNIGASLAKRL----EQ-TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQEL 292 (461)
T ss_dssp TTHHHHHHHTTGGGSCC-CEEEEECCSHHHHHHHHHH----TT-TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHH
T ss_pred chHHHHHHhhccccccc-cEEEEEcchHHHHHHHHHh----hh-cCceEEEecCHHHHHHHHHHCCCceEEeccccchhh
Confidence 34555555543 23 69999999873 3555544 32 344433321 111 01
Q ss_pred cccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCe-EEEEeCC
Q 019775 94 GDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAY-LVSVTSV 137 (336)
Q Consensus 94 ~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~-vi~IT~~ 137 (336)
..-..+.+-|+++ +.++..+.-+-+.-.||+.|++ +|+.-++
T Consensus 293 L~ee~i~~~D~~i--a~T~~De~Ni~~~llAk~~gv~kvIa~vn~ 335 (461)
T 4g65_A 293 LTEENIDQVDVFI--ALTNEDETNIMSAMLAKRMGAKKVMVLIQR 335 (461)
T ss_dssp HHHTTGGGCSEEE--ECCSCHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred HhhcCchhhcEEE--EcccCcHHHHHHHHHHHHcCCccccccccc
Confidence 1112345555554 5556666666666788999985 6666554
No 281
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=56.64 E-value=20 Score=26.78 Aligned_cols=52 Identities=15% Similarity=-0.020 Sum_probs=32.9
Q ss_pred EEEEEeCCCCcHHHHHHH-HHHHHcCCeEEEEeCCCCCccccccCEEEEcCCC
Q 019775 104 ILVMFSKSGNTEELLKVV-PCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVE 155 (336)
Q Consensus 104 lvi~iS~sG~~~~~~~~~-~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~ 155 (336)
+++..|.+|+|+.+.+.+ +.+.+.|+.+..+.......+.++.-+.|.+|+-
T Consensus 5 ~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~l~~~d~vi~g~pt~ 57 (147)
T 2hna_A 5 TLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVISSTH 57 (147)
T ss_dssp EEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECCTTSCSSCSEEEEEEECCTT
T ss_pred EEEEECCchHHHHHHHHHHHHHHHCCCceEEecCCCHHHcccCCeEEEEECcc
Confidence 566679999999988775 5577788887766543333343333344444554
No 282
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=56.50 E-value=22 Score=33.76 Aligned_cols=69 Identities=19% Similarity=0.288 Sum_probs=51.4
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.-..+++.+ ..|..+|+..+.+.+....... --.+..|..-+=+.-|...+..++++.|+++|++||+
T Consensus 170 G~~~gi~~~L-dyLk~LGvt~I~L~Pi~~~~~~-~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~Vil 238 (585)
T 1wzl_A 170 GDLKGVIDRL-PYLEELGVTALYFTPIFASPSH-HKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIIL 238 (585)
T ss_dssp CCHHHHHHTH-HHHHHHTCCEEEECCCEECSSS-SCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHh-HHHHHcCCCEEEECCcccCCCC-CCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4445677776 8899999999998875543321 1234556655567788899999999999999999984
No 283
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=55.87 E-value=21 Score=25.00 Aligned_cols=76 Identities=21% Similarity=0.123 Sum_probs=40.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcC-CeeeecCCccc-ccc--------c----------cCCCCCCcEEEEEeCCCCc
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLG-IKSGFLNPLDA-LHG--------D----------IGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g-~~~~~~~~~~~-~~~--------~----------~~~~~~~dlvi~iS~sG~~ 114 (336)
.+|.++|.|. ++..+...|...| ..+..+..... ... . ...+..-|++|... |..
T Consensus 6 ~~v~I~G~G~---iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~--~~~ 80 (118)
T 3ic5_A 6 WNICVVGAGK---IGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA--PFF 80 (118)
T ss_dssp EEEEEECCSH---HHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS--CGG
T ss_pred CeEEEECCCH---HHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC--Cch
Confidence 3788888754 4555566666667 55555432111 000 0 00123345555444 322
Q ss_pred HHHHHHHHHHHHcCCeEEEEeC
Q 019775 115 EELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
....+++.+.+.|++.+-+|+
T Consensus 81 -~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 81 -LTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp -GHHHHHHHHHHTTCEEECCCS
T ss_pred -hhHHHHHHHHHhCCCEEEecC
Confidence 346667777888888776664
No 284
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=55.56 E-value=54 Score=23.50 Aligned_cols=81 Identities=10% Similarity=0.049 Sum_probs=52.2
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
.+|.++. ........+...|...|..+....+.......+... +-|++|+=. -...+-.++++.+++. ++++|
T Consensus 5 ~~iLivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlvi~d~--~~~~~g~~~~~~l~~~~~~~pii 79 (142)
T 2qxy_A 5 PTVMVVD--ESRITFLAVKNALEKDGFNVIWAKNEQEAFTFLRRE-KIDLVFVDV--FEGEESLNLIRRIREEFPDTKVA 79 (142)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTTS-CCSEEEEEC--TTTHHHHHHHHHHHHHCTTCEEE
T ss_pred CeEEEEe--CCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhcc-CCCEEEEeC--CCCCcHHHHHHHHHHHCCCCCEE
Confidence 3677765 445667777788888899988777665544444333 345554433 3334456667776664 58999
Q ss_pred EEeCCCCC
Q 019775 133 SVTSVEGN 140 (336)
Q Consensus 133 ~IT~~~~s 140 (336)
++|+....
T Consensus 80 ~ls~~~~~ 87 (142)
T 2qxy_A 80 VLSAYVDK 87 (142)
T ss_dssp EEESCCCH
T ss_pred EEECCCCH
Confidence 99987654
No 285
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=55.52 E-value=26 Score=33.27 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=50.7
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+++.+ ..|..+|+..+.+.+.......- -.+..|..=+=+.-|...+..++++.|+++|++||+
T Consensus 172 ~G~~~gi~~~L-dyLk~LGvt~I~L~Pi~~~~~~~-GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 241 (588)
T 1j0h_A 172 GGDLQGIIDHL-DYLVDLGITGIYLTPIFRSPSNH-KYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVML 241 (588)
T ss_dssp CCCHHHHHHTH-HHHHHHTCCEEEECCCEECSSSS-CCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEECCcccCCCCC-CcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEE
Confidence 35555677776 78999999999988755433211 234445544456678889999999999999999984
No 286
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=55.37 E-value=24 Score=24.20 Aligned_cols=82 Identities=13% Similarity=0.106 Sum_probs=48.2
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH----cCCeE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA----KGAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~----~g~~v 131 (336)
+|.++.. .......+...|...|..+....+........... +-|++|+ ...-...+-.++++..++ .++++
T Consensus 3 ~iliv~~--~~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~-~~dlii~-d~~~~~~~~~~~~~~l~~~~~~~~~~i 78 (119)
T 2j48_A 3 HILLLEE--EDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLL-QPIVILM-AWPPPDQSCLLLLQHLREHQADPHPPL 78 (119)
T ss_dssp EEEEECC--CHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHH-CCSEEEE-ECSTTCCTHHHHHHHHHHTCCCSSCCC
T ss_pred EEEEEeC--CHHHHHHHHHHHHhCCcEEEEecCHHHHHHHHHhc-CCCEEEE-ecCCCCCCHHHHHHHHHhccccCCCCE
Confidence 6666653 44556667777778898888776655433332222 3455443 332222334566666665 46889
Q ss_pred EEEeCCCCCc
Q 019775 132 VSVTSVEGNA 141 (336)
Q Consensus 132 i~IT~~~~s~ 141 (336)
|++|+.....
T Consensus 79 i~~~~~~~~~ 88 (119)
T 2j48_A 79 VLFLGEPPVD 88 (119)
T ss_dssp EEEESSCCSS
T ss_pred EEEeCCCCch
Confidence 9999876544
No 287
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=55.14 E-value=31 Score=24.80 Aligned_cols=83 Identities=8% Similarity=0.017 Sum_probs=50.2
Q ss_pred CeEEEEeccchHHHHHHHHHHHHh-cCCe-eeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH----cC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLIS-LGIK-SGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA----KG 128 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~-~g~~-~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~----~g 128 (336)
.+|.++. ........+...|.. .|.. +....+.......+... +-|++|+ ...-...+-.++++.+++ .+
T Consensus 9 ~~iLivd--d~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~-~~dlii~-d~~l~~~~g~~~~~~l~~~~~~~~ 84 (143)
T 3cnb_A 9 FSILIIE--DDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTV-KPDVVML-DLMMVGMDGFSICHRIKSTPATAN 84 (143)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHT-CCSEEEE-ETTCTTSCHHHHHHHHHTSTTTTT
T ss_pred ceEEEEE--CCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhc-CCCEEEE-ecccCCCcHHHHHHHHHhCccccC
Confidence 3677765 445666777777887 8888 77777655544333332 3455444 332222334566666665 46
Q ss_pred CeEEEEeCCCCCc
Q 019775 129 AYLVSVTSVEGNA 141 (336)
Q Consensus 129 ~~vi~IT~~~~s~ 141 (336)
+++|++|+.....
T Consensus 85 ~~ii~~s~~~~~~ 97 (143)
T 3cnb_A 85 IIVIAMTGALTDD 97 (143)
T ss_dssp SEEEEEESSCCHH
T ss_pred CcEEEEeCCCCHH
Confidence 8999999876543
No 288
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=54.79 E-value=24 Score=26.08 Aligned_cols=82 Identities=9% Similarity=0.025 Sum_probs=49.7
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHH--cCCeE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKA--KGAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~--~g~~v 131 (336)
.+|.++. ........+...|...|..+....+.......+... +-|++|+= ..++ .+-.++++.+++ .++++
T Consensus 15 ~~ILivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlvi~D~~l~~--~~g~~~~~~l~~~~~~~~i 89 (153)
T 3hv2_A 15 PEILLVD--SQEVILQRLQQLLSPLPYTLHFARDATQALQLLASR-EVDLVISAAHLPQ--MDGPTLLARIHQQYPSTTR 89 (153)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHS-CCSEEEEESCCSS--SCHHHHHHHHHHHCTTSEE
T ss_pred ceEEEEC--CCHHHHHHHHHHhcccCcEEEEECCHHHHHHHHHcC-CCCEEEEeCCCCc--CcHHHHHHHHHhHCCCCeE
Confidence 3677765 344566777788888899888877665544333332 34554443 3333 233455555554 46899
Q ss_pred EEEeCCCCCc
Q 019775 132 VSVTSVEGNA 141 (336)
Q Consensus 132 i~IT~~~~s~ 141 (336)
|++|+.....
T Consensus 90 i~~s~~~~~~ 99 (153)
T 3hv2_A 90 ILLTGDPDLK 99 (153)
T ss_dssp EEECCCCCHH
T ss_pred EEEECCCCHH
Confidence 9999876543
No 289
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=54.44 E-value=41 Score=23.48 Aligned_cols=81 Identities=7% Similarity=0.027 Sum_probs=47.0
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH--cCCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA--KGAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~--~g~~vi 132 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++ .++++|
T Consensus 5 ~ilivd--d~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~-~~dlvl~D~~l~~~~--g~~~~~~l~~~~~~~~ii 79 (124)
T 1srr_A 5 KILIVD--DQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE-RPDLVLLDMKIPGMD--GIEILKRMKVIDENIRVI 79 (124)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHH-CCSEEEEESCCTTCC--HHHHHHHHHHHCTTCEEE
T ss_pred eEEEEe--CCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhcc-CCCEEEEecCCCCCC--HHHHHHHHHHhCCCCCEE
Confidence 666665 344556667777777788887666554433333222 3455544 3344433 2345555554 468999
Q ss_pred EEeCCCCCc
Q 019775 133 SVTSVEGNA 141 (336)
Q Consensus 133 ~IT~~~~s~ 141 (336)
.+|+.....
T Consensus 80 ~~s~~~~~~ 88 (124)
T 1srr_A 80 IMTAYGELD 88 (124)
T ss_dssp EEESSCCHH
T ss_pred EEEccCchH
Confidence 999876543
No 290
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=54.03 E-value=38 Score=23.74 Aligned_cols=80 Identities=10% Similarity=0.131 Sum_probs=48.0
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH----cCCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA----KGAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~----~g~~ 130 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++ .+++
T Consensus 4 ~ilivdd--~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~-~~dlvi~D~~l~~~~--g~~~~~~l~~~~~~~~~~ 78 (127)
T 2jba_A 4 RILVVED--EAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEP-WPDLILLAWMLPGGS--GIQFIKHLRRESMTRDIP 78 (127)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTTCEEEEECSHHHHHTTCSSS-CCSEEEEESEETTEE--HHHHHHHHHTSTTTTTSC
T ss_pred EEEEEcC--CHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHhcc-CCCEEEEecCCCCCC--HHHHHHHHHhCcccCCCC
Confidence 5666553 34556666777777888888777655544444332 3465544 2334432 3456666665 4689
Q ss_pred EEEEeCCCCC
Q 019775 131 LVSVTSVEGN 140 (336)
Q Consensus 131 vi~IT~~~~s 140 (336)
+|.+|+....
T Consensus 79 ii~~s~~~~~ 88 (127)
T 2jba_A 79 VVMLTARGEE 88 (127)
T ss_dssp EEEEEETTHH
T ss_pred EEEEeCCCCH
Confidence 9999987543
No 291
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=53.64 E-value=44 Score=23.46 Aligned_cols=81 Identities=10% Similarity=0.040 Sum_probs=46.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++. ++++|
T Consensus 5 ~ilivdd--~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~-~~dlvi~D~~l~~~~--g~~~~~~l~~~~~~~~ii 79 (126)
T 1dbw_A 5 TVHIVDD--EEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDV-RNGVLVTDLRMPDMS--GVELLRNLGDLKINIPSI 79 (126)
T ss_dssp EEEEEES--SHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGGC-CSEEEEEECCSTTSC--HHHHHHHHHHTTCCCCEE
T ss_pred EEEEEcC--CHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHhcC-CCCEEEEECCCCCCC--HHHHHHHHHhcCCCCCEE
Confidence 6666653 34455666677777788887766655443333322 3455443 2334433 34555555553 67899
Q ss_pred EEeCCCCCc
Q 019775 133 SVTSVEGNA 141 (336)
Q Consensus 133 ~IT~~~~s~ 141 (336)
.+|+.....
T Consensus 80 ~~s~~~~~~ 88 (126)
T 1dbw_A 80 VITGHGDVP 88 (126)
T ss_dssp EEECTTCHH
T ss_pred EEECCCCHH
Confidence 999876543
No 292
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=53.63 E-value=22 Score=25.90 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=44.3
Q ss_pred EEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeC---CCCcHH--HHHHHHHHHH--cCCe
Q 019775 58 FFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSK---SGNTEE--LLKVVPCAKA--KGAY 130 (336)
Q Consensus 58 ~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~---sG~~~~--~~~~~~~ak~--~g~~ 130 (336)
|.-..|.+..+|+.++..+...|..+..++-.+. ....+.+.|.+|+.|- .|.++. +...++.++. +|-+
T Consensus 6 y~S~tGnT~~~a~~i~~~l~~~g~~v~~~~~~~~---~~~~l~~~d~vi~g~p~y~~~~~~~~~~~~fl~~l~~~l~~k~ 82 (137)
T 2fz5_A 6 YWSGTGNTEAMANEIEAAVKAAGADVESVRFEDT---NVDDVASKDVILLGCPAMGSEELEDSVVEPFFTDLAPKLKGKK 82 (137)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHTTCCEEEEETTSC---CHHHHHTCSEEEEECCCBTTTBCCHHHHHHHHHHHGGGCSSCE
T ss_pred EECCCChHHHHHHHHHHHHHhCCCeEEEEEcccC---CHHHHhcCCEEEEEccccCCCCCCHHHHHHHHHHhhhhcCCCE
Confidence 3444578889999999999988877765531111 0112345566666643 233455 7777777643 3444
Q ss_pred EEEEe
Q 019775 131 LVSVT 135 (336)
Q Consensus 131 vi~IT 135 (336)
+.+++
T Consensus 83 ~~~~~ 87 (137)
T 2fz5_A 83 VGLFG 87 (137)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 293
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=53.57 E-value=62 Score=27.56 Aligned_cols=76 Identities=7% Similarity=-0.039 Sum_probs=49.7
Q ss_pred EEeccchHHHHHHHHHHHHhc--CCeeeecCCccccccccCCCCCCcEEEEEeCCCC-cHHHHH---HHHHHHHcCCe-E
Q 019775 59 FTGVGKSGFVANKISQTLISL--GIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN-TEELLK---VVPCAKAKGAY-L 131 (336)
Q Consensus 59 i~G~G~s~~~a~~~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-~~~~~~---~~~~ak~~g~~-v 131 (336)
+|+..++..+|+.++.+|..- ...+.-+++++.......+ ..|++|+-|.++. +..+.+ ++..+|+.|++ +
T Consensus 3 i~~g~~~~~la~~ia~~lg~~l~~~~~~~F~dGE~~v~i~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~k~~~A~~i 80 (286)
T 3lrt_A 3 IIALRSSLKLAARIAEELKTEPVMPDERRFPDGELYLRYDED--LTGHNIFIIGNTHSDAEVMEMILTLSAIQDYRTKSV 80 (286)
T ss_dssp EEECGGGHHHHHHHHHHTTSCEECCEEEECTTSCEEEECCSC--CTTSEEEEECCCCSHHHHHHHHHHHHHGGGSCCSEE
T ss_pred EEECCCCHHHHHHHHHHhCCCeeeeEEEECCCCCEEEEEcCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCCEE
Confidence 566667778899988887632 3344456666665544334 6799999998765 444444 45778888876 4
Q ss_pred EEEeC
Q 019775 132 VSVTS 136 (336)
Q Consensus 132 i~IT~ 136 (336)
.++-.
T Consensus 81 t~ViP 85 (286)
T 3lrt_A 81 NIIAP 85 (286)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 45543
No 294
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=52.70 E-value=30 Score=33.03 Aligned_cols=70 Identities=24% Similarity=0.337 Sum_probs=49.2
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccC-CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIG-ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+++.+ ..|..+|++.+.+.+......... -.+..|..-+=+.-|...+..++++.|+++|++||+
T Consensus 141 G~~~gi~~~L-~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~Vil 211 (602)
T 2bhu_A 141 GTYRAAAEKL-PYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFL 211 (602)
T ss_dssp CSHHHHHHTH-HHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHH-HHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 5545666666 778999999999887654332211 233445444445568889999999999999999884
No 295
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=52.68 E-value=32 Score=34.07 Aligned_cols=115 Identities=9% Similarity=-0.014 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHcCC-CeEEEEeccchHHHHHHHHHHHH-hcCCeeeecCCcc------ccccccCCCCCCcEEEEEeCCC
Q 019775 41 PHTLTFTQTLLKCR-GTIFFTGVGKSGFVANKISQTLI-SLGIKSGFLNPLD------ALHGDIGILSSDDILVMFSKSG 112 (336)
Q Consensus 41 ~~i~~~~~~i~~a~-~~I~i~G~G~s~~~a~~~~~~l~-~~g~~~~~~~~~~------~~~~~~~~~~~~dlvi~iS~sG 112 (336)
+.++.+++.+.+.+ +.|.+++.+.+..-..++..+|. .+|-+.+-..... ........+..-|+++++. .-
T Consensus 324 eAl~~ia~~L~~i~~~~i~~~~s~~~t~E~~~~~~kl~~~lGt~n~d~~~~~~~~~~~~~~~~~~di~~ad~Il~~G-Np 402 (783)
T 3i9v_3 324 EAFLALKEGLKEARGEEVGLYLAHDATLEEGLLASELAKALKTPHLDFQGRTAAPASLFPPASLEDLLQADFALVLG-DP 402 (783)
T ss_dssp HHHHHHHHHHHTCCTTSEEEEECTTCCTTHHHHHHHHHHHTTCSCEEETTCCSSCGGGSCBCCHHHHHHCSCEEEES-CH
T ss_pred HHHHHHHHHHHhhccCCEEEEECCCCCHHHHHHHHHHHHHhCCCcccCCchhhhhhccCCCCCHHHHhhCCEEEEeC-Ch
Confidence 44566666665432 36888877654433333334443 3454322211110 0001111234557888886 32
Q ss_pred Cc--HHHHHHHHHHH-------------------------HcCCeEEEEeCCCCCccccccCEEEEcCCCcc
Q 019775 113 NT--EELLKVVPCAK-------------------------AKGAYLVSVTSVEGNALAAVCDMNVHLPVERE 157 (336)
Q Consensus 113 ~~--~~~~~~~~~ak-------------------------~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~ 157 (336)
.. +....-++.+. ++|+++|+|-.. .+.++..||..+.+..+.+
T Consensus 403 ~~~~P~~~~rlr~a~~~~~~~~~~~~g~~~~~~~v~~~~~~~g~klividPr-~t~ta~~Ad~~l~i~PGtD 473 (783)
T 3i9v_3 403 TEEAPILHLRLSEFVRDLKPPHRYNHGTPFADLQIKERMPRRTDKMALFAPY-RAPLMKWAAIHEVHRPGEE 473 (783)
T ss_dssp HHHSTHHHHHHHHHHTTCCCCCCBTTBSCSSCTTCCTTCCCCTTSEEEEESS-CCGGGTTCSEEEECCSSCH
T ss_pred hHhCcHHHHHHHHHHHhcccchhhcccccchhhhhhhhhhcCCCEEEEEeCC-cchhhHhhcceEecCCCcH
Confidence 21 12222334442 678999999875 6678899999998866544
No 296
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=52.36 E-value=45 Score=23.81 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=48.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH-c-CCeEE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA-K-GAYLV 132 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~-~-g~~vi 132 (336)
.+|.++. ........+...|...|..+....+.......+.. .+-|++| ..+.+ -.++++.+++ . ++++|
T Consensus 19 ~~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~-~~~dlvi---~~~~~--g~~~~~~l~~~~~~~~ii 90 (137)
T 2pln_A 19 MRVLLIE--KNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDI-RNYDLVM---VSDKN--ALSFVSRIKEKHSSIVVL 90 (137)
T ss_dssp SEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHH-SCCSEEE---ECSTT--HHHHHHHHHHHSTTSEEE
T ss_pred CeEEEEe--CCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHHc-CCCCEEE---EcCcc--HHHHHHHHHhcCCCccEE
Confidence 4777765 44556667777788889988877765554433322 2457777 23322 2344444444 4 89999
Q ss_pred EEeCCCCC
Q 019775 133 SVTSVEGN 140 (336)
Q Consensus 133 ~IT~~~~s 140 (336)
++|+....
T Consensus 91 ~ls~~~~~ 98 (137)
T 2pln_A 91 VSSDNPTS 98 (137)
T ss_dssp EEESSCCH
T ss_pred EEeCCCCH
Confidence 99987654
No 297
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=52.30 E-value=29 Score=25.03 Aligned_cols=82 Identities=9% Similarity=0.075 Sum_probs=49.2
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH----cCCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA----KGAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~----~g~~ 130 (336)
.+|.++.- .......+...|...|..+....+.......+... +-|++|+ ...-...+-.++++.+++ .+++
T Consensus 7 ~~iLivdd--~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~-~~dlvi~-d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 7 PRILICED--DPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARR-PYAAMTV-DLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp SEEEEECS--CHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHS-CCSEEEE-CSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCEEEEcC--CHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhC-CCCEEEE-eCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 37777753 44556666777778898888777665544333332 3455444 332222334556666655 4789
Q ss_pred EEEEeCCCCC
Q 019775 131 LVSVTSVEGN 140 (336)
Q Consensus 131 vi~IT~~~~s 140 (336)
+|++|+....
T Consensus 83 ii~~s~~~~~ 92 (140)
T 3grc_A 83 IVVVSANARE 92 (140)
T ss_dssp EEEECTTHHH
T ss_pred EEEEecCCCh
Confidence 9999987543
No 298
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=52.07 E-value=33 Score=24.32 Aligned_cols=82 Identities=5% Similarity=-0.074 Sum_probs=46.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc----CCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK----GAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~----g~~ 130 (336)
.+|.++.-. ......+...|. .|..+....+.......+... +-|++|+ ...-...+-.++++.+++. +++
T Consensus 5 ~~ilivdd~--~~~~~~l~~~l~-~~~~v~~~~~~~~a~~~l~~~-~~dlvi~-d~~l~~~~g~~~~~~l~~~~~~~~~p 79 (133)
T 3nhm_A 5 PKVLIVENS--WTMRETLRLLLS-GEFDCTTAADGASGLQQALAH-PPDVLIS-DVNMDGMDGYALCGHFRSEPTLKHIP 79 (133)
T ss_dssp CEEEEECSC--HHHHHHHHHHHT-TTSEEEEESSHHHHHHHHHHS-CCSEEEE-CSSCSSSCHHHHHHHHHHSTTTTTCC
T ss_pred CEEEEEcCC--HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHhcC-CCCEEEE-eCCCCCCCHHHHHHHHHhCCccCCCC
Confidence 367777643 344455555555 788887777655544333322 3455443 3332233456666777764 689
Q ss_pred EEEEeCCCCCc
Q 019775 131 LVSVTSVEGNA 141 (336)
Q Consensus 131 vi~IT~~~~s~ 141 (336)
+|.+|+.....
T Consensus 80 ii~~s~~~~~~ 90 (133)
T 3nhm_A 80 VIFVSGYAPRT 90 (133)
T ss_dssp EEEEESCCC--
T ss_pred EEEEeCCCcHh
Confidence 99999875443
No 299
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=51.94 E-value=46 Score=26.31 Aligned_cols=70 Identities=17% Similarity=0.210 Sum_probs=43.2
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcC-----CeeeecCCccccccccCCCCCCcEEEEEeCCCCcHH---------HHHHH
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLG-----IKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEE---------LLKVV 121 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g-----~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~---------~~~~~ 121 (336)
+|.++-.|.+.. ..+.+.|.+.| ..+..+.+.. . ..-|.+|+ +-+|...+ ..+.+
T Consensus 2 ~I~iid~~~g~~--~s~~~~l~~~G~~~~~~~~~~~~~~~-------~-~~~dglil-pG~g~~~~~~~~l~~~~~~~~i 70 (201)
T 1gpw_B 2 RIGIISVGPGNI--MNLYRGVKRASENFEDVSIELVESPR-------N-DLYDLLFI-PGVGHFGEGMRRLRENDLIDFV 70 (201)
T ss_dssp EEEEECCSSSCC--HHHHHHHHHHSTTBSSCEEEEECSCC-------S-SCCSEEEE-CCCSCSHHHHHHHHHTTCHHHH
T ss_pred EEEEEecCCchH--HHHHHHHHHcCCCCCceEEEEECCCc-------c-cCCCEEEE-CCCCcHHHHHHHHHhhCHHHHH
Confidence 566666663222 33345677778 7887776422 1 23466555 66666433 34566
Q ss_pred HHHHHcCCeEEEEeC
Q 019775 122 PCAKAKGAYLVSVTS 136 (336)
Q Consensus 122 ~~ak~~g~~vi~IT~ 136 (336)
+.+-++|.+++.|+-
T Consensus 71 ~~~~~~~~PilGIC~ 85 (201)
T 1gpw_B 71 RKHVEDERYVVGVCL 85 (201)
T ss_dssp HHHHHTTCEEEEETH
T ss_pred HHHHHcCCeEEEECh
Confidence 677688999999985
No 300
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=51.81 E-value=11 Score=27.66 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=31.2
Q ss_pred CCCCCcEEEEEeC---CCCcHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 98 ILSSDDILVMFSK---SGNTEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 98 ~~~~~dlvi~iS~---sG~~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
.+.++|.+++-+. +++..+....++.++++|+.+++++.+
T Consensus 52 ~~~~gd~lvv~~ldRl~R~~~~~~~~~~~l~~~gv~l~~~~~~ 94 (124)
T 3pkz_A 52 FVEMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLP 94 (124)
T ss_dssp HCCTTCEEEESSHHHHCSCHHHHHHHHHHHHHTTCEEEETTCG
T ss_pred HHHCCCEEEEeecccccCCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3556687777765 566678888889999999999998754
No 301
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=51.61 E-value=36 Score=25.03 Aligned_cols=80 Identities=8% Similarity=-0.011 Sum_probs=49.4
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH--cCCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA--KGAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~--~g~~vi 132 (336)
+|.++. ........+...|...|..+....+.......+.... -|++|+ +..++. +-.++++.+++ .++++|
T Consensus 9 ~iLivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~-~dlvi~d~~l~~~--~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 9 TVMLVD--DEQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTS-VQLVISDMRMPEM--GGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTSC-CSEEEEESSCSSS--CHHHHHHHHHHHCTTSEEE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCC-CCEEEEecCCCCC--CHHHHHHHHHHhCCCCcEE
Confidence 676665 4456667777888888998887776655444443333 455444 333332 23455555555 368999
Q ss_pred EEeCCCCC
Q 019775 133 SVTSVEGN 140 (336)
Q Consensus 133 ~IT~~~~s 140 (336)
++|+....
T Consensus 84 ~ls~~~~~ 91 (154)
T 2rjn_A 84 VISGYADA 91 (154)
T ss_dssp EEECGGGH
T ss_pred EEecCCCH
Confidence 99987653
No 302
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=50.66 E-value=37 Score=24.43 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=53.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH----cCCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA----KGAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~----~g~~ 130 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ +..+|. +-.++++.+++ .+.+
T Consensus 6 ~iLivdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~-~~dlvl~D~~lp~~--~g~~~~~~lr~~~~~~~~p 80 (136)
T 3t6k_A 6 TLLIVDD--DDTVAEMLELVLRGAGYEVRRAASGEEALQQIYKN-LPDALICDVLLPGI--DGYTLCKRVRQHPLTKTLP 80 (136)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEEESCCSSS--CHHHHHHHHHHSGGGTTCC
T ss_pred EEEEEeC--CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhC-CCCEEEEeCCCCCC--CHHHHHHHHHcCCCcCCcc
Confidence 6666643 34556667777778898888777655543333322 3455444 333443 33555555555 3688
Q ss_pred EEEEeCCCCCccc-----cccCEEEEcCC
Q 019775 131 LVSVTSVEGNALA-----AVCDMNVHLPV 154 (336)
Q Consensus 131 vi~IT~~~~s~l~-----~~ad~~i~~~~ 154 (336)
+|.+|+..+.... .-++.++.-|.
T Consensus 81 ii~~t~~~~~~~~~~~~~~ga~~~l~KP~ 109 (136)
T 3t6k_A 81 ILMLTAQGDISAKIAGFEAGANDYLAKPF 109 (136)
T ss_dssp EEEEECTTCHHHHHHHHHHTCSEEEETTC
T ss_pred EEEEecCCCHHHHHHHHhcCcceEEeCCC
Confidence 9999987654432 22455555444
No 303
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=50.37 E-value=25 Score=31.76 Aligned_cols=77 Identities=9% Similarity=0.104 Sum_probs=52.0
Q ss_pred eEEEEeccchH-HHHHHHHHHHHhcCCeeeecCCcccccccc----------CCCCCCcEEEEEeCCCCcHHHHHHHHHH
Q 019775 56 TIFFTGVGKSG-FVANKISQTLISLGIKSGFLNPLDALHGDI----------GILSSDDILVMFSKSGNTEELLKVVPCA 124 (336)
Q Consensus 56 ~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~----------~~~~~~dlvi~iS~sG~~~~~~~~~~~a 124 (336)
.+++-+++.+. .+++.+ ..|..+|+..+.+.+........ --....|...+=+.-|...+..++++.|
T Consensus 6 ~~~~q~f~~~~~~i~~~l-~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~ 84 (422)
T 1ua7_A 6 GTILHAWNWSFNTLKHNM-KDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAA 84 (422)
T ss_dssp SCEEECTTBCHHHHHHTH-HHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHH
T ss_pred cEEEEEecCCHHHHHHHH-HHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHH
Confidence 45566666555 566666 56999999999888743321110 0123344444445568889999999999
Q ss_pred HHcCCeEEE
Q 019775 125 KAKGAYLVS 133 (336)
Q Consensus 125 k~~g~~vi~ 133 (336)
+++|++||+
T Consensus 85 h~~Gi~Vil 93 (422)
T 1ua7_A 85 EEYGIKVIV 93 (422)
T ss_dssp HTTTCEEEE
T ss_pred HHCCCEEEE
Confidence 999999885
No 304
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=50.26 E-value=13 Score=27.78 Aligned_cols=39 Identities=10% Similarity=0.270 Sum_probs=29.2
Q ss_pred CCCCcEEEEEeCC---CCcHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 99 LSSDDILVMFSKS---GNTEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 99 ~~~~dlvi~iS~s---G~~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.++|++++-+.+ ++..+....++.++++|+.+++++.+
T Consensus 54 ~~~gd~lvV~~ldRL~R~~~d~~~~~~~l~~~gv~l~~~~~~ 95 (139)
T 2gm5_A 54 VKEGDVILVKKLDHLGRDTADMIQLIKEFDAQGVSIRFIDDG 95 (139)
T ss_dssp CCTTCEEEESSGGGTSSSHHHHHHHHHHHHHTTCEEEETTTT
T ss_pred HHCCCEEEEEecccccCCHHHHHHHHHHHHhCCCEEEEecCC
Confidence 4456777777654 44567778888999999999988753
No 305
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=50.18 E-value=44 Score=27.03 Aligned_cols=80 Identities=5% Similarity=-0.044 Sum_probs=45.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccc-cc-------cc-----------cCCCCCCcEEEEEeCCCCcH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDA-LH-------GD-----------IGILSSDDILVMFSKSGNTE 115 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~-~~-------~~-----------~~~~~~~dlvi~iS~sG~~~ 115 (336)
++|.++|.| .++..++..|...|. +..+..... .. .. ...+..-|.+|+. .+...
T Consensus 10 ~~viI~G~G---~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~--~~~d~ 83 (234)
T 2aef_A 10 RHVVICGWS---ESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVD--LESDS 83 (234)
T ss_dssp CEEEEESCC---HHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEEC--CSCHH
T ss_pred CEEEEECCC---hHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEc--CCCcH
Confidence 589999987 456666777777777 665542111 00 00 0123444555443 34445
Q ss_pred HHHHHHHHHHHcCC--eEEEEeCCCCC
Q 019775 116 ELLKVVPCAKAKGA--YLVSVTSVEGN 140 (336)
Q Consensus 116 ~~~~~~~~ak~~g~--~vi~IT~~~~s 140 (336)
....++..+|+.|. ++|+-+.+...
T Consensus 84 ~n~~~~~~a~~~~~~~~iia~~~~~~~ 110 (234)
T 2aef_A 84 ETIHCILGIRKIDESVRIIAEAERYEN 110 (234)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECSSGGG
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCHhH
Confidence 55666677887765 67776655443
No 306
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=49.96 E-value=56 Score=27.91 Aligned_cols=81 Identities=17% Similarity=0.099 Sum_probs=51.6
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHH
Q 019775 38 LSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEEL 117 (336)
Q Consensus 38 ~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~ 117 (336)
++.+.++++.+.+.++ +-+.++|++..-..+..+...-...|.+++.++....-.. -...|++| .|...++
T Consensus 202 lp~~~~~~a~~~~~~a-DllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~~----~~~~d~~i----~g~a~~v 272 (290)
T 3u31_A 202 VSSDLLKEAEEEIAKC-DLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYIT----NKMSDYHV----CAKFSEL 272 (290)
T ss_dssp CCHHHHHHHHHHHHHC-SEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCCTTT----TTTCSEEE----ESCGGGH
T ss_pred CCHHHHHHHHHHHhcC-CEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCCCCC----CccceEEE----ECCHHHH
Confidence 4556678888888899 6999999987766666666665667888877764321110 01135544 3666667
Q ss_pred HHHHHHHHHc
Q 019775 118 LKVVPCAKAK 127 (336)
Q Consensus 118 ~~~~~~ak~~ 127 (336)
+++++.++..
T Consensus 273 l~~~~~l~~~ 282 (290)
T 3u31_A 273 TKVANILKGS 282 (290)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 7766655543
No 307
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=49.95 E-value=19 Score=33.23 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=48.3
Q ss_pred eccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 61 GVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 61 G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
+.|.=..+.+.+ ..|..+|+..+.+.+........ -....|..=+=+.-|...+..++++.|+++|++||+
T Consensus 51 ~~Gdl~gi~~~L-dyL~~LGv~~I~L~Pi~~~~~~~-GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~Vil 121 (488)
T 2wc7_A 51 KGGDLWGIMEDL-DYIQNLGINAIYFTPIFQSASNH-RYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVL 121 (488)
T ss_dssp CCCCHHHHHHTH-HHHHHHTCCEEEESCCEEECTTC-TTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCHHHHHHhh-HHHHHcCCCEEEECCCCCCCCCC-CCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 345555666665 68889999999988755432211 122333333335567789999999999999999883
No 308
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=49.71 E-value=75 Score=27.38 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=22.7
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
++|+|+|.|.+...+. +..|.+.|..|....
T Consensus 5 ~~i~~iGiGg~Gms~~--A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGL--AAIAKEAGFEVSGCD 35 (326)
T ss_dssp CEEEEESCCSHHHHHH--HHHHHHTTCEEEEEE
T ss_pred cEEEEEEECHHHHHHH--HHHHHhCCCEEEEEc
Confidence 5999999999886432 345667788887654
No 309
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=49.59 E-value=56 Score=23.13 Aligned_cols=82 Identities=12% Similarity=0.080 Sum_probs=49.9
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCC--eeeecCCccccccccCCC------CCCcEEEEE-eCCCCcHHHHHHHHHHH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGI--KSGFLNPLDALHGDIGIL------SSDDILVMF-SKSGNTEELLKVVPCAK 125 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~------~~~dlvi~i-S~sG~~~~~~~~~~~ak 125 (336)
.+|.++. ........+...|...|. .+....+.......+... .+-|++|+= ..++ .+-.++++..+
T Consensus 3 ~~ilivd--d~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~--~~g~~~~~~l~ 78 (140)
T 1k68_A 3 KKIFLVE--DNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPK--KDGREVLAEIK 78 (140)
T ss_dssp CEEEEEC--CCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSS--SCHHHHHHHHH
T ss_pred CeEEEEe--CCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCc--ccHHHHHHHHH
Confidence 3666665 445667777888888888 777776665544433331 244555442 2333 23456666666
Q ss_pred H----cCCeEEEEeCCCCC
Q 019775 126 A----KGAYLVSVTSVEGN 140 (336)
Q Consensus 126 ~----~g~~vi~IT~~~~s 140 (336)
+ .++++|++|+....
T Consensus 79 ~~~~~~~~pii~ls~~~~~ 97 (140)
T 1k68_A 79 SDPTLKRIPVVVLSTSINE 97 (140)
T ss_dssp HSTTGGGSCEEEEESCCCH
T ss_pred cCcccccccEEEEecCCcH
Confidence 6 45889999987654
No 310
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=49.48 E-value=34 Score=31.47 Aligned_cols=70 Identities=20% Similarity=0.271 Sum_probs=49.9
Q ss_pred ccchHHHHHHHHHHH--------HhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTL--------ISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l--------~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+.+.+ ..| ..+|+..+.+.+....... .-....|..=+=+.-|...+..++++.|+++|++||+
T Consensus 23 ~Gdl~gi~~~L-dyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~-~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~Vil 100 (488)
T 1wza_A 23 IGDLKGIIEKL-DYLNDGDPETIADLGVNGIWLMPIFKSPSY-HGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVII 100 (488)
T ss_dssp CCCHHHHHHTH-HHHCCSCTTCCSSCCCSEEEECCCEECSSS-SCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHhh-hhhhccccchhhhcCccEEEECCcccCCCC-CCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 45545566665 577 8899999998876543322 2234455554556678899999999999999999883
No 311
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=49.44 E-value=23 Score=32.25 Aligned_cols=77 Identities=18% Similarity=0.110 Sum_probs=49.8
Q ss_pred eEEEEeccchH-HHHHHHHHHHHhcCCeeeecCCcccccccc---CCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeE
Q 019775 56 TIFFTGVGKSG-FVANKISQTLISLGIKSGFLNPLDALHGDI---GILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~---~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~v 131 (336)
.+.+-+++.+. .+++.+...|..+|+.++.+.+.......- ...+..|.- +=+.-|...+..++++.|+++|++|
T Consensus 3 ~~~~q~F~w~~~gi~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~-idp~~Gt~~dfk~Lv~~aH~~Gi~V 81 (448)
T 1g94_A 3 TTFVHLFEWNWQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYE-LQSRGGNRAQFIDMVNRCSAAGVDI 81 (448)
T ss_dssp CCEEEETTCCHHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccc-cCCCCCCHHHHHHHHHHHHHCCCEE
Confidence 45566676665 455555568899999999888644432210 011111211 1145688899999999999999999
Q ss_pred EE
Q 019775 132 VS 133 (336)
Q Consensus 132 i~ 133 (336)
|+
T Consensus 82 il 83 (448)
T 1g94_A 82 YV 83 (448)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 312
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=49.44 E-value=56 Score=24.10 Aligned_cols=66 Identities=18% Similarity=0.247 Sum_probs=41.4
Q ss_pred EEEe--ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCC-CCcEEEEEeC--C---CCc-HHHHHHHHHHHH
Q 019775 58 FFTG--VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILS-SDDILVMFSK--S---GNT-EELLKVVPCAKA 126 (336)
Q Consensus 58 ~i~G--~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~dlvi~iS~--s---G~~-~~~~~~~~~ak~ 126 (336)
.+|| .|.+..+|+.++..+...|..+..++-.+. ....+. +.|.+|+.+- . |.. ..+...++.++.
T Consensus 6 I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---~~~~l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~~l~~ 80 (148)
T 3f6r_A 6 IVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA---SAENLADGYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDR 80 (148)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB---CCTTTTTTCSEEEEEECEECSSSCEECHHHHHHHTTGGG
T ss_pred EEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC---CHhHhcccCCEEEEEecccCCCCCCCcHHHHHHHHHhhc
Confidence 4444 488899999999999998887766542221 122344 6676666652 2 343 456677766553
No 313
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=49.39 E-value=90 Score=27.48 Aligned_cols=81 Identities=7% Similarity=-0.019 Sum_probs=46.8
Q ss_pred CeEEEEec---cchHHHHHHHHHHHHhcCCeeeecCCcc-ccccccCCCCCCcEEEEEeC---CCCcHHHHHHHHHHHH-
Q 019775 55 GTIFFTGV---GKSGFVANKISQTLISLGIKSGFLNPLD-ALHGDIGILSSDDILVMFSK---SGNTEELLKVVPCAKA- 126 (336)
Q Consensus 55 ~~I~i~G~---G~s~~~a~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~~~dlvi~iS~---sG~~~~~~~~~~~ak~- 126 (336)
++|.++.. |.+..+|+.++..+...|..+....-.. ........+.+-|++|+.|- .|..+.+.+.++.++.
T Consensus 253 ~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~gsp~~~~~~~~~~~~~l~~l~~~ 332 (402)
T 1e5d_A 253 NKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKACHHSQIMSEISDAGAVIVGSPTHNNGILPYVAGTLQYIKGL 332 (402)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHHHTCSEEEEECCCBTTBCCHHHHHHHHHHHHT
T ss_pred CcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEEEECCccCCCchHHHHHHHHHhhhc
Confidence 35555543 5677899999998888787665543111 11111122346677777652 3445667777777665
Q ss_pred --cCCeEEEEe
Q 019775 127 --KGAYLVSVT 135 (336)
Q Consensus 127 --~g~~vi~IT 135 (336)
+|-+++.++
T Consensus 333 ~l~~k~~~~f~ 343 (402)
T 1e5d_A 333 RPQNKIGGAFG 343 (402)
T ss_dssp CCCSCEEEEEE
T ss_pred ccCCCEEEEEE
Confidence 344555554
No 314
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.00 E-value=76 Score=27.81 Aligned_cols=69 Identities=14% Similarity=0.231 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHH-H
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLK-V 120 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~-~ 120 (336)
+..++-+.+... +++.++|.|. ++.+++..|.+.|.++.++........ ..+++.+ +
T Consensus 132 ~~~~l~~~~~~~-~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~~~~~~~l 189 (367)
T 1xhc_A 132 DADRIKESIENS-GEAIIIGGGF---IGLELAGNLAEAGYHVKLIHRGAMFLG------------------LDEELSNMI 189 (367)
T ss_dssp HHHHHHHHHHHH-SEEEEEECSH---HHHHHHHHHHHTTCEEEEECSSSCCTT------------------CCHHHHHHH
T ss_pred HHHHHHHHhhcC-CcEEEECCCH---HHHHHHHHHHhCCCEEEEEeCCCeecc------------------CCHHHHHHH
Confidence 333333344455 4999999885 567778888889999988865433211 1234433 3
Q ss_pred HHHHHHcCCeEE
Q 019775 121 VPCAKAKGAYLV 132 (336)
Q Consensus 121 ~~~ak~~g~~vi 132 (336)
.+.++++|+++.
T Consensus 190 ~~~l~~~gV~i~ 201 (367)
T 1xhc_A 190 KDMLEETGVKFF 201 (367)
T ss_dssp HHHHHHTTEEEE
T ss_pred HHHHHHCCCEEE
Confidence 566778887654
No 315
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=48.92 E-value=63 Score=23.01 Aligned_cols=83 Identities=14% Similarity=0.080 Sum_probs=48.9
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHHc--CCeE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKAK--GAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~~--g~~v 131 (336)
.+|.++. ........+...|...|..+....+.......+....+-|++|+= ..++. +-.++++.+++. ++++
T Consensus 16 ~~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~~--~g~~~~~~l~~~~~~~~i 91 (138)
T 2b4a_A 16 FRVTLVE--DEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDL--SIFSLLDIVKEQTKQPSV 91 (138)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGSCSEEEEETTCTTS--CHHHHHHHHTTSSSCCEE
T ss_pred CeEEEEC--CCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCC--CHHHHHHHHHhhCCCCCE
Confidence 4677665 445566777777888899888777655544333330234655443 33332 234566666654 6899
Q ss_pred EEEe-CCCCCc
Q 019775 132 VSVT-SVEGNA 141 (336)
Q Consensus 132 i~IT-~~~~s~ 141 (336)
|.+| +.....
T Consensus 92 i~ls~~~~~~~ 102 (138)
T 2b4a_A 92 LILTTGRHELI 102 (138)
T ss_dssp EEEESCC--CC
T ss_pred EEEECCCCCHH
Confidence 9999 665443
No 316
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=48.85 E-value=71 Score=22.86 Aligned_cols=69 Identities=13% Similarity=0.165 Sum_probs=45.6
Q ss_pred EEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCC--CcHHHHHHHHHHHHcCCeEEEEe
Q 019775 58 FFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSG--NTEELLKVVPCAKAKGAYLVSVT 135 (336)
Q Consensus 58 ~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG--~~~~~~~~~~~ak~~g~~vi~IT 135 (336)
.|+..+... ..+.|...|..-|+...- ..++.-|++|+++..- +.+-+..-++.|++.|-++++|=
T Consensus 7 lFISh~~~d-~~~~L~~~l~~~~f~~~~-----------~~I~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~ 74 (111)
T 1eiw_A 7 LYITEGEVE-DYRVFLERLEQSGLEWRP-----------ATPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVR 74 (111)
T ss_dssp EEECCCCSH-HHHHHHHHHHHHCSCEEE-----------CCSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEEC
T ss_pred EEEecccHh-HHHHHHHHHhCCCCeeec-----------CccccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEE
Confidence 456666666 555555555322333322 5677888888775433 34557777999999999999998
Q ss_pred CCC
Q 019775 136 SVE 138 (336)
Q Consensus 136 ~~~ 138 (336)
...
T Consensus 75 ~~g 77 (111)
T 1eiw_A 75 PYG 77 (111)
T ss_dssp CSS
T ss_pred cCC
Confidence 754
No 317
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=48.80 E-value=44 Score=26.14 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=49.5
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++. +-.++++.+++. ++++|
T Consensus 6 ~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~-~~dlvl~D~~lp~~--~g~~~~~~l~~~~~~~~ii 80 (208)
T 1yio_A 6 TVFVVD--DDMSVREGLRNLLRSAGFEVETFDCASTFLEHRRPE-QHGCLVLDMRMPGM--SGIELQEQLTAISDGIPIV 80 (208)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHCCTT-SCEEEEEESCCSSS--CHHHHHHHHHHTTCCCCEE
T ss_pred EEEEEc--CCHHHHHHHHHHHHhCCceEEEcCCHHHHHHhhhcc-CCCEEEEeCCCCCC--CHHHHHHHHHhcCCCCCEE
Confidence 676664 344566677777778898888776655544333322 3455443 233433 335666666654 68999
Q ss_pred EEeCCCCCc
Q 019775 133 SVTSVEGNA 141 (336)
Q Consensus 133 ~IT~~~~s~ 141 (336)
.+|+.....
T Consensus 81 ~ls~~~~~~ 89 (208)
T 1yio_A 81 FITAHGDIP 89 (208)
T ss_dssp EEESCTTSC
T ss_pred EEeCCCCHH
Confidence 999876644
No 318
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=48.71 E-value=42 Score=31.92 Aligned_cols=72 Identities=15% Similarity=0.218 Sum_probs=51.8
Q ss_pred eccchHHHHHHHHHHHHhcCCeeeecCCccccccc---cCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 61 GVGKSGFVANKISQTLISLGIKSGFLNPLDALHGD---IGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 61 G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~---~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
+.|.=..+.+.+ ..|..+|+.++.+.+....... .--....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 143 ~gGdl~gi~~~L-dyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~Vil 217 (601)
T 3edf_A 143 HGGDIRGTIDHL-DYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQ 217 (601)
T ss_dssp CCCCHHHHHHTH-HHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCcCHHHHHHHH-HHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 345555666665 5789999999998876543211 11234556655667789999999999999999999883
No 319
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=48.50 E-value=17 Score=32.07 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=42.5
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
+.+-|++|++-.|+...-...+...++.+|++++.|-. ...+....+|+.|.-.
T Consensus 204 ~~~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~-~pT~~d~~adl~i~g~ 257 (355)
T 3pki_A 204 SRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNL-QPTKHDRHADLRIHGY 257 (355)
T ss_dssp HHHCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECS-SCCTTGGGCSEEECSC
T ss_pred HhcCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECC-CCCCCCCccCEEEeCC
Confidence 45568999999999887777777889999998887764 4567788899887643
No 320
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=48.25 E-value=3.8 Score=30.28 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcCCeee-ecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCcc
Q 019775 67 FVANKISQTLISLGIKSG-FLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNAL 142 (336)
Q Consensus 67 ~~a~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l 142 (336)
.++..+...|...|..+. ...++......... .+-|++|. +.-+|.+. .++++..+++++++|.+|++.....
T Consensus 19 ~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~-~~~DlvllDi~mP~~~G--~el~~~lr~~~ipvI~lTa~~~~~~ 93 (123)
T 2lpm_A 19 MIAMLIEDTLCELGHEVAATASRMQEALDIARK-GQFDIAIIDVNLDGEPS--YPVADILAERNVPFIFATGYGSKGL 93 (123)
T ss_dssp TTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHH-CCSSEEEECSSSSSCCS--HHHHHHHHHTCCSSCCBCTTCTTSC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-CCCCEEEEecCCCCCCH--HHHHHHHHcCCCCEEEEecCccHHH
Confidence 345566677777788775 34444443322222 23454433 33445442 4567777889999999998765443
No 321
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=48.21 E-value=51 Score=23.30 Aligned_cols=88 Identities=14% Similarity=0.087 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHhcCCeee-ecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEEEEeCCCCCc
Q 019775 65 SGFVANKISQTLISLGIKSG-FLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLVSVTSVEGNA 141 (336)
Q Consensus 65 s~~~a~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi~IT~~~~s~ 141 (336)
.......+...|...|..+. ...+........... +-|++|+ ...-...+-.++++.+++. +.++|.+|+.....
T Consensus 10 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~-~~dlii~-d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~ 87 (134)
T 3f6c_A 10 HPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL-KPDIVII-DVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHF 87 (134)
T ss_dssp CHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHH-CCSEEEE-ETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---C
T ss_pred CHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhc-CCCEEEE-ecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChH
Confidence 44556667777777887776 555544433333222 3455444 3332223445666666664 57899999876654
Q ss_pred cc-----cccCEEEEcCC
Q 019775 142 LA-----AVCDMNVHLPV 154 (336)
Q Consensus 142 l~-----~~ad~~i~~~~ 154 (336)
.. .-++.++.-|.
T Consensus 88 ~~~~~~~~g~~~~l~kp~ 105 (134)
T 3f6c_A 88 YGKHCADAGANGFVSKKE 105 (134)
T ss_dssp THHHHHHTTCSEEEEGGG
T ss_pred HHHHHHHhCCCEEEeCCC
Confidence 32 22455555443
No 322
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=47.82 E-value=81 Score=24.48 Aligned_cols=60 Identities=18% Similarity=0.167 Sum_probs=44.7
Q ss_pred eEEEE-eccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEE
Q 019775 56 TIFFT-GVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSV 134 (336)
Q Consensus 56 ~I~i~-G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~I 134 (336)
+|-++ |.-+-..+++....-|..+|.+.. +=+.|.-+....+.+.++.++++|+++|..
T Consensus 8 ~V~IimgS~SD~~v~~~a~~~l~~~gi~~e--------------------v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa 67 (169)
T 3trh_A 8 FVAILMGSDSDLSTMETAFTELKSLGIPFE--------------------AHILSAHRTPKETVEFVENADNRGCAVFIA 67 (169)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTSHHHHHHHHHHHHHTTEEEEEE
T ss_pred cEEEEECcHHhHHHHHHHHHHHHHcCCCEE--------------------EEEEcccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 45444 444556999999999999999731 445677777888999999999999985543
Q ss_pred e
Q 019775 135 T 135 (336)
Q Consensus 135 T 135 (336)
-
T Consensus 68 ~ 68 (169)
T 3trh_A 68 A 68 (169)
T ss_dssp E
T ss_pred E
Confidence 3
No 323
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=47.39 E-value=40 Score=30.93 Aligned_cols=70 Identities=17% Similarity=0.316 Sum_probs=48.5
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCcccccccc-----C--CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDI-----G--ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~-----~--~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+++.+ ..|..+|+..+.+.+........ . -....|..=+=+.-|...+..++++.|+++|++||+
T Consensus 40 G~~~gi~~~L-dyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 116 (478)
T 2guy_A 40 GTWQGIIDKL-DYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMV 116 (478)
T ss_dssp BCHHHHHHTH-HHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHH-HHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4444566666 78999999999988755432110 0 122334444446778889999999999999999884
No 324
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=47.35 E-value=55 Score=31.28 Aligned_cols=70 Identities=13% Similarity=0.083 Sum_probs=49.7
Q ss_pred chHHHHHHHHHHHHhcCCeeeecCCcccccccc-CCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 64 KSGFVANKISQTLISLGIKSGFLNPLDALHGDI-GILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 64 ~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.=..++..+...|..+|++.+.+.+.......- --....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 153 ~~~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~Vil 223 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL 223 (617)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEE
Confidence 334666776678899999999988755433211 1233445544456668889999999999999999884
No 325
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=47.15 E-value=2e+02 Score=27.68 Aligned_cols=94 Identities=12% Similarity=0.050 Sum_probs=41.7
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchH--HHHHHHHHHHHhcCCeeeecCCcc--cc----ccccCCC-CCCcEEEEEeCCC
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSG--FVANKISQTLISLGIKSGFLNPLD--AL----HGDIGIL-SSDDILVMFSKSG 112 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~--~~a~~~~~~l~~~g~~~~~~~~~~--~~----~~~~~~~-~~~dlvi~iS~sG 112 (336)
.++++.+.|.+. ++|.|+|---.- ..+.-+...|..+|.++..+-+.. .. ...+... ...+++|++..+-
T Consensus 61 Av~~i~~aI~~~-ekI~I~GH~D~DGi~Saa~L~~~L~~lG~~v~~~ip~r~~egygl~~~~I~~~~~~~~LIItVD~G~ 139 (666)
T 2zxr_A 61 AAALLEEALRQG-KRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLEASDLFLTVDCGI 139 (666)
T ss_dssp HHHHHHHHHHTT-CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEECCC--------------------CCEEEESCCC-
T ss_pred HHHHHHHHHHcC-CeEEEEeccCCchHHHHHHHHHHHHHcCCcEEEecCCCCCccccCCHHHHHhhccCCCEEEEEcCCc
Confidence 355556666677 699999975322 334445566778898886644211 11 1011111 2346776666543
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEeCCCCC
Q 019775 113 NTEELLKVVPCAKAKGAYLVSVTSVEGN 140 (336)
Q Consensus 113 ~~~~~~~~~~~ak~~g~~vi~IT~~~~s 140 (336)
....- ++.+++.|..+| ||+....
T Consensus 140 ~s~~~---i~~a~~~g~~VI-ViDHH~~ 163 (666)
T 2zxr_A 140 TNHAE---LRELLENGVEVI-VTDHHTP 163 (666)
T ss_dssp ----------------CEEE-EECCCC-
T ss_pred hhhhh---HHHHHhCCCCEE-EECCcCC
Confidence 33222 456778888765 5565543
No 326
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=46.50 E-value=22 Score=25.07 Aligned_cols=45 Identities=9% Similarity=-0.113 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL 89 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~ 89 (336)
.+.+....+.+. +.|+++..+..+ +..++..|...|.++..+.++
T Consensus 44 ~l~~~~~~l~~~-~~ivvyC~~G~r--s~~aa~~L~~~G~~v~~l~GG 88 (108)
T 3gk5_A 44 ELREKWKILERD-KKYAVICAHGNR--SAAAVEFLSQLGLNIVDVEGG 88 (108)
T ss_dssp HHHHHGGGSCTT-SCEEEECSSSHH--HHHHHHHHHTTTCCEEEETTH
T ss_pred HHHHHHHhCCCC-CeEEEEcCCCcH--HHHHHHHHHHcCCCEEEEcCc
Confidence 343333334455 478888754433 556677888899988887643
No 327
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=46.44 E-value=88 Score=23.26 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=21.7
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
++|.++|.|. ++..++..|...|.++..+.
T Consensus 20 ~~v~IiG~G~---iG~~la~~L~~~g~~V~vid 49 (155)
T 2g1u_A 20 KYIVIFGCGR---LGSLIANLASSSGHSVVVVD 49 (155)
T ss_dssp CEEEEECCSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEECCCH---HHHHHHHHHHhCCCeEEEEE
Confidence 5899999874 45555666677788777664
No 328
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=46.32 E-value=12 Score=27.24 Aligned_cols=47 Identities=15% Similarity=-0.020 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCC
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNP 88 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~ 88 (336)
..+.+....+.+. +.|+++..+.....|..++..|...|.++..+.+
T Consensus 59 ~~l~~~~~~l~~~-~~ivvyC~~g~r~~s~~a~~~L~~~G~~v~~l~G 105 (124)
T 3flh_A 59 KDLATRIGELDPA-KTYVVYDWTGGTTLGKTALLVLLSAGFEAYELAG 105 (124)
T ss_dssp HHHHHHGGGSCTT-SEEEEECSSSSCSHHHHHHHHHHHHTCEEEEETT
T ss_pred HHHHHHHhcCCCC-CeEEEEeCCCCchHHHHHHHHHHHcCCeEEEeCC
Confidence 3333333334455 5888887655443355566778888998777754
No 329
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=46.31 E-value=63 Score=23.17 Aligned_cols=95 Identities=11% Similarity=-0.066 Sum_probs=54.6
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCC-CCCCcEEEEE-eCCCCcHHHHHHHHHHHHc--CCeE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGI-LSSDDILVMF-SKSGNTEELLKVVPCAKAK--GAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~dlvi~i-S~sG~~~~~~~~~~~ak~~--g~~v 131 (336)
+|.++. ........+...|...|..+....+.......... -.+-|++|+= ..++ .+-.++++.+++. ++++
T Consensus 5 ~ilivd--d~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~--~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 5 KILVID--DESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPK--LSGMDILREIKKITPHMAV 80 (143)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSS--SCHHHHHHHHHHHCTTCEE
T ss_pred EEEEEc--CCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCC--CcHHHHHHHHHHhCCCCeE
Confidence 666665 34456667777788889888877765554433331 2244555443 3333 3334555555553 6899
Q ss_pred EEEeCCCCCcc-----ccccCEEEEcCC
Q 019775 132 VSVTSVEGNAL-----AAVCDMNVHLPV 154 (336)
Q Consensus 132 i~IT~~~~s~l-----~~~ad~~i~~~~ 154 (336)
|++|+...... ..-++.++.-|.
T Consensus 81 i~ls~~~~~~~~~~~~~~g~~~~l~kp~ 108 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKEGAFEYLRKPV 108 (143)
T ss_dssp EEEECTTCHHHHHHHHHTTCSEEEESSC
T ss_pred EEEECCCCHHHHHHHHHhCcceeEeCCC
Confidence 99998765432 222455555443
No 330
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=45.81 E-value=23 Score=25.47 Aligned_cols=27 Identities=19% Similarity=0.233 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCc
Q 019775 115 EELLKVVPCAKAKGAYLVSVTSVEGNA 141 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~~~~s~ 141 (336)
+.+.++++.++++|.+++.+|++....
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~~ 47 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGGL 47 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCGG
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 558889999999999999999875543
No 331
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=45.71 E-value=58 Score=25.59 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=46.0
Q ss_pred EEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEE
Q 019775 57 IFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSV 134 (336)
Q Consensus 57 I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~I 134 (336)
-.+.|.-+...+++.....|..+|++.. +-++|.-+....+.+.++.++++|+++|..
T Consensus 26 ~IimGS~SD~~v~~~a~~~L~~~gI~~e--------------------~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa 83 (181)
T 4b4k_A 26 GVIMGSTSDWETMKYACDILDELNIPYE--------------------KKVVSAHRTPDYMFEYAETARERGLKVIIA 83 (181)
T ss_dssp EEEESSGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTSHHHHHHHHHHTTTTTCCEEEE
T ss_pred EEEECCHhHHHHHHHHHHHHHHcCCCee--------------------EEEEccccChHHHHHHHHHHHhcCceEEEE
Confidence 3677888888999999999999997631 335677788888999999999999875533
No 332
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=45.51 E-value=47 Score=23.49 Aligned_cols=82 Identities=16% Similarity=0.165 Sum_probs=46.3
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCe-eeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH----cCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIK-SGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA----KGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~----~g~ 129 (336)
+|.++. .+......+...|...|.. +....+..........-.+-|++|+ +..++. +-.++++.+++ ..+
T Consensus 7 ~iLivd--d~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~--~g~~~~~~lr~~~~~~~~ 82 (129)
T 3h1g_A 7 KLLVVD--DSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEM--NGLDLVKKVRSDSRFKEI 82 (129)
T ss_dssp CEEEEC--SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHCTTCCEEEECSCCSSS--CHHHHHHHHHTSTTCTTC
T ss_pred EEEEEe--CCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCC--CHHHHHHHHHhcCCCCCC
Confidence 566664 3455667777778888875 5555544433222222223455543 233333 34566666665 367
Q ss_pred eEEEEeCCCCCc
Q 019775 130 YLVSVTSVEGNA 141 (336)
Q Consensus 130 ~vi~IT~~~~s~ 141 (336)
++|.+|+.....
T Consensus 83 pii~~s~~~~~~ 94 (129)
T 3h1g_A 83 PIIMITAEGGKA 94 (129)
T ss_dssp CEEEEESCCSHH
T ss_pred eEEEEeCCCChH
Confidence 999999876554
No 333
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=45.45 E-value=66 Score=28.97 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=47.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc-ccc-------------------ccccCCCCCCcEEEEEeCCCCc
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL-DAL-------------------HGDIGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~-~~~-------------------~~~~~~~~~~dlvi~iS~sG~~ 114 (336)
.+|.|+|+|. ++..++..|...|.++..+... +.. ......+.+-|++|+ ..+..
T Consensus 5 ~~viIiG~Gr---~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv--~~~~~ 79 (413)
T 3l9w_A 5 MRVIIAGFGR---FGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN--AIDDP 79 (413)
T ss_dssp CSEEEECCSH---HHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE--CCSSH
T ss_pred CeEEEECCCH---HHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE--CCCCh
Confidence 5899999986 4455555666677777666521 110 000112334444433 34556
Q ss_pred HHHHHHHHHHHHcCC--eEEEEeCCCC
Q 019775 115 EELLKVVPCAKAKGA--YLVSVTSVEG 139 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~--~vi~IT~~~~ 139 (336)
...+.++..+|+.+. +||+-+.+..
T Consensus 80 ~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 80 QTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 777788888888775 6887776543
No 334
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=45.41 E-value=42 Score=23.23 Aligned_cols=80 Identities=8% Similarity=0.096 Sum_probs=44.5
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++. ........+...|...|..+....+........... +-|++++ +..++. +-.++++..++. .+++|
T Consensus 2 ~ilivd--d~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~-~~dlil~D~~l~~~--~g~~~~~~l~~~~~~~~ii 76 (121)
T 2pl1_A 2 RVLVVE--DNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEH-IPDIAIVDLGLPDE--DGLSLIRRWRSNDVSLPIL 76 (121)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEECSCCSSS--CHHHHHHHHHHTTCCSCEE
T ss_pred eEEEEe--CcHHHHHHHHHHHhhcCCEEEEeCCHHHHHHHHhcc-CCCEEEEecCCCCC--CHHHHHHHHHhcCCCCCEE
Confidence 344443 334455666677777788877766655443332222 3455543 233332 234556666553 57899
Q ss_pred EEeCCCCC
Q 019775 133 SVTSVEGN 140 (336)
Q Consensus 133 ~IT~~~~s 140 (336)
.+|+....
T Consensus 77 ~~s~~~~~ 84 (121)
T 2pl1_A 77 VLTARESW 84 (121)
T ss_dssp EEESCCCH
T ss_pred EEecCCCH
Confidence 99987654
No 335
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=45.37 E-value=16 Score=32.84 Aligned_cols=66 Identities=20% Similarity=0.327 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..+++.+ ..|..+|+..+.+.+......... ....|..-+= +.-|...+..++++.|+++|++||+
T Consensus 21 ~gi~~~l-dyl~~lGv~~i~l~Pi~~~~~~~g-Y~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~Vil 87 (405)
T 1ht6_A 21 NMMMGKV-DDIAAAGVTHVWLPPPSHSVSNEG-YMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIA 87 (405)
T ss_dssp HHHHTTH-HHHHHTTCCEEEECCCSCBSSTTS-SSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHH-HHHHHcCCCEEEeCCCccCCCCCC-CCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3555655 588999999998876444322111 1111211112 4558889999999999999999985
No 336
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=45.28 E-value=27 Score=29.19 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=43.1
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
+.+-|++|++-.|....-...+...++.+|+++|.|-. ...+....+|+.|.-+.
T Consensus 181 ~~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~-~~~~~d~~~~~~i~~~~ 235 (253)
T 1ma3_A 181 AKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNA-EPTMADPIFDVKIIGKA 235 (253)
T ss_dssp HHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEES-SCCTTGGGCSEEEESCH
T ss_pred HHhCCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeC-CCCCCCCceeEEEeCCH
Confidence 44569999999898886677778889999999988875 45667778888877544
No 337
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=44.92 E-value=68 Score=25.01 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=44.8
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE-EE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV-SV 134 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi-~I 134 (336)
-..+.|.-+...+++.....|..+|++.. +-+.|.-+...++.+.++.++++|+++| ++
T Consensus 15 V~IimGS~SD~~v~~~a~~~l~~~gi~~e--------------------v~V~saHR~p~~l~~~~~~a~~~g~~ViIa~ 74 (173)
T 4grd_A 15 VGVLMGSSSDWDVMKHAVAILQEFGVPYE--------------------AKVVSAHRMPDEMFDYAEKARERGLRAIIAG 74 (173)
T ss_dssp EEEEESSGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTSHHHHHHHHHHHTTTTCSEEEEE
T ss_pred EEEEeCcHhHHHHHHHHHHHHHHcCCCEE--------------------EEEEccccCHHHHHHHHHHHHhcCCeEEEEe
Confidence 34455555566999999999999997621 3356777777888999999999999855 34
Q ss_pred eC
Q 019775 135 TS 136 (336)
Q Consensus 135 T~ 136 (336)
.+
T Consensus 75 AG 76 (173)
T 4grd_A 75 AG 76 (173)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 338
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=44.52 E-value=1.3e+02 Score=27.27 Aligned_cols=60 Identities=15% Similarity=0.243 Sum_probs=39.2
Q ss_pred cCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHH-HHHHHHHcCCe
Q 019775 52 KCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLK-VVPCAKAKGAY 130 (336)
Q Consensus 52 ~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~-~~~~ak~~g~~ 130 (336)
.. ++|.++|.|. ++.+++..|.+.|..+.++........ ...+++.+ +.+.++++|++
T Consensus 185 ~~-~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~~~~~~~~~l~~~l~~~Gv~ 243 (480)
T 3cgb_A 185 KV-EDVTIIGGGA---IGLEMAETFVELGKKVRMIERNDHIGT-----------------IYDGDMAEYIYKEADKHHIE 243 (480)
T ss_dssp CC-CEEEEECCHH---HHHHHHHHHHHTTCEEEEECCGGGTTS-----------------SSCHHHHHHHHHHHHHTTCE
T ss_pred CC-CeEEEECCCH---HHHHHHHHHHhcCCeEEEEEeCCchhh-----------------cCCHHHHHHHHHHHHHcCcE
Confidence 45 6999999885 466777788888999988765443211 11244433 45667778876
Q ss_pred EE
Q 019775 131 LV 132 (336)
Q Consensus 131 vi 132 (336)
+.
T Consensus 244 i~ 245 (480)
T 3cgb_A 244 IL 245 (480)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 339
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=44.52 E-value=40 Score=24.05 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=55.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc---CCeE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK---GAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~---g~~v 131 (336)
.+|.++.- .......+...|...|..+....+............+-|++| +...-...+-.++++.+++. ++++
T Consensus 8 ~~ilivdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~~dlvi-~D~~l~~~~g~~~~~~l~~~~~~~~~i 84 (136)
T 3hdv_A 8 PLVLVVDD--NAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMI-TDLRMQPESGLDLIRTIRASERAALSI 84 (136)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCTTEEEEE-ECSCCSSSCHHHHHHHHHTSTTTTCEE
T ss_pred CeEEEECC--CHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCCCCcEEE-EeccCCCCCHHHHHHHHHhcCCCCCCE
Confidence 47777763 345666677777788998887776555433332222235444 33332233445666666654 5789
Q ss_pred EEEeCCCCCccc-----cccCEEEEcCC
Q 019775 132 VSVTSVEGNALA-----AVCDMNVHLPV 154 (336)
Q Consensus 132 i~IT~~~~s~l~-----~~ad~~i~~~~ 154 (336)
|.+|+....... .-++.++.-|.
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP~ 112 (136)
T 3hdv_A 85 IVVSGDTDVEEAVDVMHLGVVDFLLKPV 112 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSC
T ss_pred EEEeCCCChHHHHHHHhCCcceEEeCCC
Confidence 999987654322 22455555444
No 340
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=44.43 E-value=1.5e+02 Score=25.29 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=24.1
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
++|.|+| .+..++..+...|...|..++.+.
T Consensus 26 ~~vlVtG--atG~iG~~l~~~L~~~g~~V~~~~ 56 (351)
T 3ruf_A 26 KTWLITG--VAGFIGSNLLEKLLKLNQVVIGLD 56 (351)
T ss_dssp CEEEEET--TTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC--CCcHHHHHHHHHHHHCCCEEEEEe
Confidence 5899987 445778888888888888887754
No 341
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=44.40 E-value=59 Score=29.99 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=21.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
++|+|+|.|.|...+ ++..|...|..+....
T Consensus 20 ~~v~viGiG~sG~s~--~A~~l~~~G~~V~~~D 50 (491)
T 2f00_A 20 RHIHFVGIGGAGMGG--IAEVLANEGYQISGSD 50 (491)
T ss_dssp CEEEEETTTSTTHHH--HHHHHHHTTCEEEEEC
T ss_pred CEEEEEEcCHHHHHH--HHHHHHhCCCeEEEEC
Confidence 589999999988642 1233455788877654
No 342
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=44.00 E-value=33 Score=28.57 Aligned_cols=54 Identities=11% Similarity=0.274 Sum_probs=41.2
Q ss_pred CCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 100 SSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 100 ~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
.+-|++|++-.|....-...+...++++|+++|.|-. ...+..+.+|+.|.-+.
T Consensus 176 ~~adlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~-~~~~~d~~~~~~i~~~~ 229 (249)
T 1m2k_A 176 ERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINP-DETPLTPIADYSLRGKA 229 (249)
T ss_dssp HHCSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECS-SCCTTGGGCSEEECSCH
T ss_pred hcCCEEEEEccCCCccchHHHHHHHHHcCCeEEEEeC-CCCCCCcceeEEEeCCH
Confidence 3459999999888876667778889999999888865 45666777887765433
No 343
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=43.94 E-value=53 Score=28.48 Aligned_cols=37 Identities=8% Similarity=-0.061 Sum_probs=31.1
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 118 LKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 118 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
.++++.+.+.|+++..|+++.-+.+-+.+|.++.-..
T Consensus 162 ~~la~~L~~~gI~vtli~Dsa~~~~m~~vd~VivGAd 198 (315)
T 3ecs_A 162 KKMAKALCHLNVPVTVVLDAAVGYIMEKADLVIVGAE 198 (315)
T ss_dssp HHHHHHHHTTTCCEEEECGGGHHHHGGGCSEEEEECS
T ss_pred HHHHHHHHHcCCCEEEEehhHHHHHHHhCCEEEECce
Confidence 4568889999999999999988888888999886433
No 344
>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.52.2.2 c.81.1.1 PDB: 1ti2_A* 1ti4_A* 1vld_M* 1vle_M* 1vlf_M*
Probab=43.92 E-value=34 Score=34.31 Aligned_cols=57 Identities=16% Similarity=0.111 Sum_probs=37.8
Q ss_pred CCCcEEEEEeCCCCcHHH-------HHHHHHHHHcCCeEEEEeCCCCCccccc-cCEEEEcCCCcc
Q 019775 100 SSDDILVMFSKSGNTEEL-------LKVVPCAKAKGAYLVSVTSVEGNALAAV-CDMNVHLPVERE 157 (336)
Q Consensus 100 ~~~dlvi~iS~sG~~~~~-------~~~~~~ak~~g~~vi~IT~~~~s~l~~~-ad~~i~~~~~~~ 157 (336)
..-|++|++.....+..+ ......++++|+++|+|-.. .+..+.. ||..+.+.-+++
T Consensus 207 ~~ad~il~~G~Np~~~p~~~~~~~~~~~~~~a~~~G~klivIDPr-~t~ta~~~Ad~~l~irPGTD 271 (875)
T 1ti6_A 207 KHAEMIVFWSSDPETNSGIYAGFESNIRRQWLKDLGVDFVFIDPH-MNHTARLVADKWFSPKIGTD 271 (875)
T ss_dssp HHCSEEEEESCCHHHHCSSSCTTTTHHHHHHHHHTTCEEEEECSB-CCHHHHHHCSEEECCCTTCH
T ss_pred hcCCEEEEECCChhhCCccCCCccchHHHHHHHHcCCeEEEECCC-CCCcccccCCEEeccCCCcH
Confidence 456788888655421111 12222388999999999875 4556665 799999977766
No 345
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=43.91 E-value=25 Score=34.18 Aligned_cols=71 Identities=18% Similarity=0.188 Sum_probs=50.2
Q ss_pred eccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 61 GVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 61 G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
+.|.=..+.+.+ ..|..+|+..+.+.+....... .-....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 260 ~gGdl~Gi~~kL-dyLk~LGvt~IwL~Pi~~s~~~-~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVil 330 (696)
T 4aee_A 260 YGGDLAGIMKHI-DHLEDLGVETIYLTPIFSSTSY-HRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVL 330 (696)
T ss_dssp CCCCHHHHHTTH-HHHHHHTCCEEEECCCEEESSS-SCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCHHHHHHHh-HHHHHcCCCEEEECCcccCCCC-CCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 345555666665 5789999999998876553322 1123334444446678899999999999999999985
No 346
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=43.90 E-value=49 Score=23.33 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=45.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcC----Ce
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKG----AY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g----~~ 130 (336)
.+|.++. ........+...|...|..+....+.......+... +-|++|+ ...-...+-.++++.+++.+ .+
T Consensus 7 ~~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlii~-d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (132)
T 3lte_A 7 KRILVVD--DDQAMAAAIERVLKRDHWQVEIAHNGFDAGIKLSTF-EPAIMTL-DLSMPKLDGLDVIRSLRQNKVANQPK 82 (132)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHT-CCSEEEE-ESCBTTBCHHHHHHHHHTTTCSSCCE
T ss_pred ccEEEEE--CCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhc-CCCEEEE-ecCCCCCCHHHHHHHHHhcCccCCCe
Confidence 4777775 344556667777778899888777665544433333 3355443 33322334566677777643 45
Q ss_pred EEEEeCC
Q 019775 131 LVSVTSV 137 (336)
Q Consensus 131 vi~IT~~ 137 (336)
++.+|..
T Consensus 83 ii~~~~~ 89 (132)
T 3lte_A 83 ILVVSGL 89 (132)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 5555544
No 347
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=43.65 E-value=91 Score=22.60 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=53.2
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcC--CeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLG--IKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~v 131 (336)
+|.++. ........+...|...| ..+....+.......+... +-|++|+ ...-...+-.++++.+++. ++++
T Consensus 22 ~iLivd--d~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~-~~dlii~-D~~l~~~~g~~~~~~l~~~~~~~~i 97 (150)
T 4e7p_A 22 KVLVAE--DQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKE-SVDIAIL-DVEMPVKTGLEVLEWIRSEKLETKV 97 (150)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTS-CCSEEEE-CSSCSSSCHHHHHHHHHHTTCSCEE
T ss_pred EEEEEc--CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhcc-CCCEEEE-eCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 555554 45566677777777776 5566666655544433333 3455443 3332223445666666654 6799
Q ss_pred EEEeCCCCCccc-----cccCEEEEcCC
Q 019775 132 VSVTSVEGNALA-----AVCDMNVHLPV 154 (336)
Q Consensus 132 i~IT~~~~s~l~-----~~ad~~i~~~~ 154 (336)
|++|+....... .-++.++.-|.
T Consensus 98 i~ls~~~~~~~~~~~~~~g~~~~l~Kp~ 125 (150)
T 4e7p_A 98 VVVTTFKRAGYFERAVKAGVDAYVLKER 125 (150)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEETTS
T ss_pred EEEeCCCCHHHHHHHHHCCCcEEEecCC
Confidence 999987654332 22455555444
No 348
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=43.61 E-value=45 Score=30.65 Aligned_cols=70 Identities=16% Similarity=0.250 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCcccccccc-----C--CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDI-----G--ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~-----~--~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+++.+ ..|..+|+..+.+.+.......- . -....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 40 G~~~gi~~~L-dyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~Vil 116 (484)
T 2aaa_A 40 GSWQGIIDHL-DYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMV 116 (484)
T ss_dssp CCHHHHHHTH-HHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHH-HHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4444666666 78999999999988765432110 0 122334444446678889999999999999999884
No 349
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=43.53 E-value=37 Score=27.21 Aligned_cols=82 Identities=20% Similarity=0.108 Sum_probs=46.1
Q ss_pred CeEEEEeccc-hH-HHHHHHHHHHHhcCCeeeecCCc---cccccccCCCCCCcEEEEEeC--CCCcHHHHHHHHHHHHc
Q 019775 55 GTIFFTGVGK-SG-FVANKISQTLISLGIKSGFLNPL---DALHGDIGILSSDDILVMFSK--SGNTEELLKVVPCAKAK 127 (336)
Q Consensus 55 ~~I~i~G~G~-s~-~~a~~~~~~l~~~g~~~~~~~~~---~~~~~~~~~~~~~dlvi~iS~--sG~~~~~~~~~~~ak~~ 127 (336)
.+|.+...+. -+ .-...++..|...|..++.+... +.+.......++ |+ |++|. +.....+.+.++.++++
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~-d~-v~lS~~~~~~~~~~~~~i~~l~~~ 166 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQP-DI-VGMSALLTTTMMNMKSTIDALIAA 166 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCC-SE-EEEECCSGGGTHHHHHHHHHHHHT
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCC-CE-EEEeccccccHHHHHHHHHHHHhc
Confidence 3565554433 33 55567777788889999987632 222222222233 33 33333 33446788888999988
Q ss_pred CC---eEEEEeCCC
Q 019775 128 GA---YLVSVTSVE 138 (336)
Q Consensus 128 g~---~vi~IT~~~ 138 (336)
|. ..|.+.+..
T Consensus 167 ~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 167 GLRDRVKVIVGGAP 180 (210)
T ss_dssp TCGGGCEEEEESTT
T ss_pred CCCCCCeEEEECCC
Confidence 74 234444443
No 350
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=43.18 E-value=39 Score=24.15 Aligned_cols=82 Identities=13% Similarity=0.040 Sum_probs=48.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeee-cCCccccccccCCCCCCcEEEEE-eCC-C-CcHHHHHHHHHHHHcCCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGF-LNPLDALHGDIGILSSDDILVMF-SKS-G-NTEELLKVVPCAKAKGAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~dlvi~i-S~s-G-~~~~~~~~~~~ak~~g~~ 130 (336)
.+|.++. ........+...|...|..+.. ..+........... +-|++|+= ... + ...+.++.++.. .+++
T Consensus 10 ~~iLivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~-~~dlii~d~~~~~~~~g~~~~~~l~~~--~~~~ 84 (140)
T 3cg0_A 10 PGVLIVE--DGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDL-RPDIALVDIMLCGALDGVETAARLAAG--CNLP 84 (140)
T ss_dssp CEEEEEC--CBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHH-CCSEEEEESSCCSSSCHHHHHHHHHHH--SCCC
T ss_pred ceEEEEE--CCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhC-CCCEEEEecCCCCCCCHHHHHHHHHhC--CCCC
Confidence 3677765 4455666777777778998884 66655543333222 34555443 333 2 233444444443 6899
Q ss_pred EEEEeCCCCCc
Q 019775 131 LVSVTSVEGNA 141 (336)
Q Consensus 131 vi~IT~~~~s~ 141 (336)
+|++|+.....
T Consensus 85 ii~ls~~~~~~ 95 (140)
T 3cg0_A 85 IIFITSSQDVE 95 (140)
T ss_dssp EEEEECCCCHH
T ss_pred EEEEecCCCHH
Confidence 99999876543
No 351
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=42.91 E-value=24 Score=27.07 Aligned_cols=8 Identities=13% Similarity=-0.047 Sum_probs=3.7
Q ss_pred eEEEEeCC
Q 019775 130 YLVSVTSV 137 (336)
Q Consensus 130 ~vi~IT~~ 137 (336)
.+|+++++
T Consensus 140 DvVLv~Gs 147 (163)
T 3mvn_A 140 DHILIMSN 147 (163)
T ss_dssp CEEEEECS
T ss_pred CEEEEECC
Confidence 34555443
No 352
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=42.87 E-value=31 Score=28.29 Aligned_cols=69 Identities=12% Similarity=0.062 Sum_probs=42.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc-cccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHH
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL-DALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKA 126 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~ 126 (336)
.+.|.++|.... ...++.. .+.|+.+-.+.+. ...+...+.++.+++.|++|.+|.++.+.+.++.--+
T Consensus 93 dLVIaAT~d~~~-N~~I~~~-ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie 162 (223)
T 3dfz_A 93 FFIVVATNDQAV-NKFVKQH-IKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLS 162 (223)
T ss_dssp SEEEECCCCTHH-HHHHHHH-SCTTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CEEEECCCCHHH-HHHHHHH-HhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHH
Confidence 366677776543 2222222 3478888777642 2333344567889999999999999998887765443
No 353
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=42.39 E-value=38 Score=24.22 Aligned_cols=81 Identities=10% Similarity=0.020 Sum_probs=47.4
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi~ 133 (336)
+|.++.- .......+...|...|..+....+.......+... +-|++|+ ...-...+-.++++.+++. ++++|+
T Consensus 9 ~ilivdd--~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~-~~dlvi~-d~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (137)
T 3hdg_A 9 KILIVED--DTDAREWLSTIISNHFPEVWSAGDGEEGERLFGLH-APDVIIT-DIRMPKLGGLEMLDRIKAGGAKPYVIV 84 (137)
T ss_dssp CEEEECS--CHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHH-CCSEEEE-CSSCSSSCHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEeC--CHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhcc-CCCEEEE-eCCCCCCCHHHHHHHHHhcCCCCcEEE
Confidence 6666653 44556666777777788887777655543333222 3455443 3332233445666666664 578999
Q ss_pred EeCCCCC
Q 019775 134 VTSVEGN 140 (336)
Q Consensus 134 IT~~~~s 140 (336)
+|+....
T Consensus 85 ~s~~~~~ 91 (137)
T 3hdg_A 85 ISAFSEM 91 (137)
T ss_dssp CCCCCCH
T ss_pred EecCcCh
Confidence 9987653
No 354
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=42.35 E-value=28 Score=28.98 Aligned_cols=55 Identities=13% Similarity=0.153 Sum_probs=42.2
Q ss_pred CCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 99 LSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 99 ~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
+.+-|++|++-.|....-...+...++++|+++|.|-. ...+....+|+.|.-+.
T Consensus 178 ~~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~-~~~~~d~~~~~~i~~~~ 232 (246)
T 1yc5_A 178 SSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNL-GETPFDDIATLKYNMDV 232 (246)
T ss_dssp HHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECS-SCCTTGGGCSEEECSCH
T ss_pred HhcCCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeC-CCCCCCcceeEEEeCCH
Confidence 44569999999888886667778889999999988865 45667777888766433
No 355
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=42.35 E-value=34 Score=31.30 Aligned_cols=70 Identities=26% Similarity=0.306 Sum_probs=48.5
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+.+.+ ..|..+|+..+.+.+........ -....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 46 ~G~~~gi~~~L-dyL~~LGv~~I~l~Pi~~~~~~~-gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~Vil 115 (475)
T 2z1k_A 46 GGTLWGVAEKL-PYLLDLGVEAIYLNPVFASTANH-RYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVIL 115 (475)
T ss_dssp CCCHHHHHHTH-HHHHHHTCCEEEECCCEEESSTT-CCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHh-HHHHHcCCCEEEECCCcCCCCCC-CcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 34444666665 78899999999988755432211 122334433445668889999999999999999884
No 356
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=42.23 E-value=40 Score=24.24 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=47.4
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc-CCeEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK-GAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~-g~~vi~ 133 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++.+ -.++++.+++. .+++|.
T Consensus 6 ~Ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~-~~dlvllD~~l~~~~--g~~l~~~l~~~~~~~ii~ 80 (136)
T 2qzj_A 6 KILIID--GDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSN-KYDLIFLEIILSDGD--GWTLCKKIRNVTTCPIVY 80 (136)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHC-CCSEEEEESEETTEE--HHHHHHHHHTTCCCCEEE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhc-CCCEEEEeCCCCCCC--HHHHHHHHccCCCCCEEE
Confidence 666665 344556667777777788887766655543333222 3455544 3444433 24556666554 688999
Q ss_pred EeCCCCC
Q 019775 134 VTSVEGN 140 (336)
Q Consensus 134 IT~~~~s 140 (336)
+|+....
T Consensus 81 ls~~~~~ 87 (136)
T 2qzj_A 81 MTYINED 87 (136)
T ss_dssp EESCCCH
T ss_pred EEcCCCH
Confidence 9987554
No 357
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=42.18 E-value=84 Score=26.30 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=55.9
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCC--CcHHHHHHHHHHHHcCCeE
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSG--NTEELLKVVPCAKAKGAYL 131 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG--~~~~~~~~~~~ak~~g~~v 131 (336)
+||.++| |+.. .-+..+...|...|+.|..++..+... ....+.+=|++|+....+ -+++..+.++..=+.|.-+
T Consensus 5 ~~vLiV~-g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~-~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgL 82 (259)
T 3rht_A 5 TRVLYCG-DTSLETAAGYLAGLMTSWQWEFDYIPSHVGLD-VGELLAKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGL 82 (259)
T ss_dssp -CEEEEE-SSCTTTTHHHHHHHHHHTTCCCEEECTTSCBC-SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEC-CCCchhHHHHHHHHHHhCCceEEEeccccccc-ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeE
Confidence 4788886 4433 567788888999999998887544322 223466788988886654 3566666666555579999
Q ss_pred EEEeCC
Q 019775 132 VSVTSV 137 (336)
Q Consensus 132 i~IT~~ 137 (336)
|.+.+.
T Consensus 83 i~~gG~ 88 (259)
T 3rht_A 83 VMLGGW 88 (259)
T ss_dssp EEECST
T ss_pred EEecCc
Confidence 999764
No 358
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=42.09 E-value=60 Score=23.21 Aligned_cols=79 Identities=10% Similarity=0.039 Sum_probs=44.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc----CCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK----GAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~----g~~ 130 (336)
+|.++. ........+...|...|..+....+.......+... +-|++|+ +..++.+ -.++++..++. .++
T Consensus 5 ~ILivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~-~~dlvi~D~~l~~~~--g~~~~~~l~~~~~~~~~~ 79 (138)
T 3c3m_A 5 TILVVD--DSPMIVDVFVTMLERGGYRPITAFSGEECLEALNAT-PPDLVLLDIMMEPMD--GWETLERIKTDPATRDIP 79 (138)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEEESCCSSSC--HHHHHHHHHHSTTTTTSC
T ss_pred eEEEEe--CCHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHhcc-CCCEEEEeCCCCCCC--HHHHHHHHHcCcccCCCC
Confidence 565554 334455666677777788887666554433333222 3355443 3334433 34555666553 678
Q ss_pred EEEEeCCCC
Q 019775 131 LVSVTSVEG 139 (336)
Q Consensus 131 vi~IT~~~~ 139 (336)
+|.+|+...
T Consensus 80 ii~ls~~~~ 88 (138)
T 3c3m_A 80 VLMLTAKPL 88 (138)
T ss_dssp EEEEESSCC
T ss_pred EEEEECCCC
Confidence 999998754
No 359
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=41.96 E-value=76 Score=22.07 Aligned_cols=81 Identities=9% Similarity=0.041 Sum_probs=45.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCC-eeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH----cCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGI-KSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA----KGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~----~g~ 129 (336)
+|.++.- .......+...|...|. .+....+........... +-|++|+ +..++. +-.++++..++ ...
T Consensus 6 ~ilivdd--~~~~~~~l~~~l~~~~~~~v~~~~~~~~a~~~~~~~-~~dlvi~D~~l~~~--~g~~l~~~l~~~~~~~~~ 80 (128)
T 1jbe_A 6 KFLVVDD--FSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAG-GYGFVISDWNMPNM--DGLELLKTIRAXXAMSAL 80 (128)
T ss_dssp CEEEECS--CHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHTTC-CCCEEEEESCCSSS--CHHHHHHHHHC--CCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHHHcCCcEEEeeCCHHHHHHHHHhc-CCCEEEEeCCCCCC--CHHHHHHHHHhhcccCCC
Confidence 5666543 44556666777777787 566666554443333322 3465543 233332 23456666665 357
Q ss_pred eEEEEeCCCCCc
Q 019775 130 YLVSVTSVEGNA 141 (336)
Q Consensus 130 ~vi~IT~~~~s~ 141 (336)
++|.+|+.....
T Consensus 81 ~ii~~s~~~~~~ 92 (128)
T 1jbe_A 81 PVLMVTAEAKKE 92 (128)
T ss_dssp CEEEEESSCCHH
T ss_pred cEEEEecCccHH
Confidence 899999876543
No 360
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=41.73 E-value=1.5e+02 Score=24.70 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=63.8
Q ss_pred cCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEE--------EE
Q 019775 37 HLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILV--------MF 108 (336)
Q Consensus 37 ~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi--------~i 108 (336)
.++++.++.+.+.+.++ +-+ +++...+......+.....+.|..+.+=+.... ......+..-|+++ ++
T Consensus 118 ~~~~~~~~~~~~~~~~~-~~v-~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~-~~~~~ll~~~dil~~N~~E~~~l~ 194 (304)
T 3ry7_A 118 TMTPEDVINAKDAIINA-DFV-VAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAK-ALPNELLSLIDIIVPNETEAELLS 194 (304)
T ss_dssp GCCHHHHHTTHHHHHTC-SEE-EEETTSCHHHHHHHHHHHHHTTCEEEEECCSCC-CCCHHHHTTCSEECCBHHHHHHHH
T ss_pred cCCHHHHHHHHHHhccC-CEE-EEcCCCCHHHHHHHHHHHHHcCCEEEEeCCccc-cccHHHHHhCCEEecCHHHHHHHh
Confidence 45666676666677787 355 455555555556666666777877655332210 00011111223221 11
Q ss_pred eCCCC-cHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCC
Q 019775 109 SKSGN-TEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVE 155 (336)
Q Consensus 109 S~sG~-~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~ 155 (336)
..... ..+..++++.+.++|++.++||....+.+.-..+-...++..
T Consensus 195 g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 242 (304)
T 3ry7_A 195 GIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAY 242 (304)
T ss_dssp SCCCCSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCS
T ss_pred CCCCCChhHHHHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCC
Confidence 11111 256677888888999999999987766544334444555443
No 361
>1wiw_A Glucose-6-phosphate isomerase like protein; riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.80.1.1
Probab=41.62 E-value=1.6e+02 Score=24.97 Aligned_cols=138 Identities=11% Similarity=0.028 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhcCCh------hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccc--c
Q 019775 25 KSQQDHLNYFFQHLSL------PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGD--I 96 (336)
Q Consensus 25 ~~~~~~l~~~~~~~~~------~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~--~ 96 (336)
+...+.+.+..+...+ ..-++++..|... ...+++. ....+|..++..|++.++...+... ..+.. .
T Consensus 129 ~~~a~~l~~~a~~~~p~~~~~~NpAK~LA~~L~~~--~Pvi~~~-~~~~~A~R~k~~l~enAk~~a~~~~--~~Hne~~i 203 (290)
T 1wiw_A 129 RSVDEALLEERRRLGPEVPVEENPAKFLAYTLLER--LPLFYSP-LFRPLEGAVQTLFARVAKSLSLTPP--PSALEFFL 203 (290)
T ss_dssp HHHHHHHHHHHTTTSTTSCGGGCHHHHHHHHHTTS--EEEEECT-TCTHHHHHHHHHHHHTTCCCCBCCC--SSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccccCHHHHHHHHHhCC--CcEEEec-CcHHHHHHHHHHHHHhcCCCccccc--cccChhhh
Confidence 3444455555444321 2445566666554 5566655 7779999999999999776655543 11111 1
Q ss_pred -CCCCC----CcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCCCcccCCCCCCChhHHHH
Q 019775 97 -GILSS----DDILVMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPVERELCPFDLAPVTSTAI 171 (336)
Q Consensus 97 -~~~~~----~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~~~~~~~~~~~~~~s~~~ 171 (336)
..-.+ +.+.+++-.. .+.+.-..+.++++|..+.-|..... +.+.-..+
T Consensus 204 ~~~~~p~~~~~~~~~v~l~d--~~r~~~~~~i~~~~~~~v~~v~~~g~------------------------s~L~~l~~ 257 (290)
T 1wiw_A 204 VGLEARHEQGDPLAAVLLGP--GEEAALAKEILESRVDALAEVPATGA------------------------NRLAQVMA 257 (290)
T ss_dssp HTTSSCGGGGTTEEEEEESC--SHHHHHHHHHHTTTSSEEEEECCCSS------------------------SHHHHHHH
T ss_pred ccccCccccccceEEEEecc--hhHHHHHHHHHHhcCCceEEEeCCCC------------------------CHHHHHHH
Confidence 22223 2355555444 55555556777788887777754221 33445566
Q ss_pred HHHHHHHHHHHHHhhcCCChHH
Q 019775 172 QMVFGDTVAIAMMGARNLTRDE 193 (336)
Q Consensus 172 ~~~l~d~l~~~~~~~~~~~~~~ 193 (336)
..++.|+...++....+.++.+
T Consensus 258 Li~~~d~asvYLAl~~G~DP~~ 279 (290)
T 1wiw_A 258 LWYRMAWTAYYLALLYGVDPGD 279 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSC
T ss_pred HHHHHHHHHHHHHHhcCCCCCc
Confidence 7789999888888888776644
No 362
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=41.48 E-value=41 Score=30.83 Aligned_cols=78 Identities=9% Similarity=0.048 Sum_probs=53.0
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCCeeeecCCcccccccc-----CCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcC
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGIKSGFLNPLDALHGDI-----GILSSDDILVMFSKSGNTEELLKVVPCAKAKG 128 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~-----~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g 128 (336)
+.+.+-+++.+. .+++.+-..|..+|+..+.+.+.......- .-....|- =+=+.-|...+..++++.|+++|
T Consensus 10 ~~~i~~~F~w~~~gi~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy-~idp~~Gt~~d~~~lv~~~h~~G 88 (471)
T 1jae_A 10 RNSIVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAG 88 (471)
T ss_dssp CEEEEEETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTT
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccc-cccCCCCCHHHHHHHHHHHHHCC
Confidence 467788887765 555654467889999999988654433210 00122231 12356788899999999999999
Q ss_pred CeEEE
Q 019775 129 AYLVS 133 (336)
Q Consensus 129 ~~vi~ 133 (336)
++||+
T Consensus 89 i~Vil 93 (471)
T 1jae_A 89 VRIYV 93 (471)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99985
No 363
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=41.43 E-value=1.3e+02 Score=26.99 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc
Q 019775 43 TLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL 89 (336)
Q Consensus 43 i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~ 89 (336)
..++.+..... +++.++|.|. ++.+++..|.+.|..+.++...
T Consensus 139 ~~~~~~~~~~~-~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~ 181 (452)
T 2cdu_A 139 AKKLFEEAPKA-KTITIIGSGY---IGAELAEAYSNQNYNVNLIDGH 181 (452)
T ss_dssp HHHHHHHGGGC-SEEEEECCSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred HHHHHHHhccC-CeEEEECcCH---HHHHHHHHHHhcCCEEEEEEcC
Confidence 33444444566 5999999886 4667777888889998877543
No 364
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=41.40 E-value=40 Score=29.62 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=54.4
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcE-EEEEeCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDI-LVMFSKSG 112 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dl-vi~iS~sG 112 (336)
..+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=...+.+. .. .+.+ +|+=..+.
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-----~~--------------~grvpViaGvg~~ 102 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-----LV--------------KAGIPVIVGTGAV 102 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-----HH--------------HTTCCEEEECCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-----Hh--------------CCCCcEEEecCCC
Confidence 3588899999999887664 46777776 44555554444455544 00 1223 33333444
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 113 NTEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 113 ~~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
.+.+.++.++.|++.|+.-+++...
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P 127 (344)
T 2hmc_A 103 NTASAVAHAVHAQKVGAKGLMVIPR 127 (344)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCC
Confidence 6799999999999999986666543
No 365
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=40.90 E-value=44 Score=30.20 Aligned_cols=69 Identities=22% Similarity=0.308 Sum_probs=48.3
Q ss_pred ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 62 VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 62 ~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
.|.=..+.+.+ ..|..+|+.++.+.+....... ..+..|..=+=..-|...+..++++.|+++|++||.
T Consensus 32 ~Gdl~gi~~~L-dyl~~LGv~~i~l~Pi~~~~~~--~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vil 100 (424)
T 2dh2_A 32 AGNLAGLKGRL-DYLSSLKVKGLVLGPIHKNQKD--DVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVIL 100 (424)
T ss_dssp CCSHHHHHTTH-HHHHHTTCSEEEECCCEEECTT--CSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHH-HHHHHcCCCEEEECCCCCCCCC--CCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEE
Confidence 45445566655 5888999999998875543221 123334444445668889999999999999999884
No 366
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=40.84 E-value=44 Score=23.21 Aligned_cols=81 Identities=12% Similarity=0.035 Sum_probs=42.6
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc----CCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK----GAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~----g~~ 130 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++. .++
T Consensus 3 ~ilivd--d~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~~~~~-~~dlvi~D~~l~~~~--g~~~~~~l~~~~~~~~~~ 77 (124)
T 1mb3_A 3 KVLIVE--DNELNMKLFHDLLEAQGYETLQTREGLSALSIAREN-KPDLILMDIQLPEIS--GLEVTKWLKEDDDLAHIP 77 (124)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHH-CCSEEEEESBCSSSB--HHHHHHHHHHSTTTTTSC
T ss_pred EEEEEc--CCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHhcC-CCCEEEEeCCCCCCC--HHHHHHHHHcCccccCCc
Confidence 566654 334556666777777788877666544433222222 3355444 3344433 34566666653 678
Q ss_pred EEEEeCCCCCc
Q 019775 131 LVSVTSVEGNA 141 (336)
Q Consensus 131 vi~IT~~~~s~ 141 (336)
+|.+|+.....
T Consensus 78 ii~~s~~~~~~ 88 (124)
T 1mb3_A 78 VVAVTAFAMKG 88 (124)
T ss_dssp EEEEC------
T ss_pred EEEEECCCCHH
Confidence 99999865443
No 367
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=40.83 E-value=29 Score=25.25 Aligned_cols=94 Identities=6% Similarity=-0.113 Sum_probs=53.0
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHH----cCCe
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKA----KGAY 130 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~----~g~~ 130 (336)
+|.++... ......+...|...|..+....+.......+... +-|++|+= ..++ .+-.++++..++ .+++
T Consensus 10 ~iLivd~~--~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlii~d~~l~~--~~g~~~~~~l~~~~~~~~~p 84 (147)
T 2zay_A 10 RIMLVDTQ--LPALAASISALSQEGFDIIQCGNAIEAVPVAVKT-HPHLIITEANMPK--ISGMDLFNSLKKNPQTASIP 84 (147)
T ss_dssp EEEEECTT--GGGGHHHHHHHHHHTEEEEEESSHHHHHHHHHHH-CCSEEEEESCCSS--SCHHHHHHHHHTSTTTTTSC
T ss_pred eEEEEeCC--HHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHHcC-CCCEEEEcCCCCC--CCHHHHHHHHHcCcccCCCC
Confidence 67776543 3344555566666788888776655543333222 34554443 3333 334566666665 4789
Q ss_pred EEEEeCCCCCcc-----ccccCEEEEcCC
Q 019775 131 LVSVTSVEGNAL-----AAVCDMNVHLPV 154 (336)
Q Consensus 131 vi~IT~~~~s~l-----~~~ad~~i~~~~ 154 (336)
+|++|+...... ..-++.++.-|.
T Consensus 85 ii~ls~~~~~~~~~~~~~~g~~~~l~kp~ 113 (147)
T 2zay_A 85 VIALSGRATAKEEAQLLDMGFIDFIAKPV 113 (147)
T ss_dssp EEEEESSCCHHHHHHHHHHTCSEEEESSC
T ss_pred EEEEeCCCCHHHHHHHHhCCCCEEEeCCC
Confidence 999998765432 223455555443
No 368
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=40.65 E-value=43 Score=33.03 Aligned_cols=57 Identities=14% Similarity=0.192 Sum_probs=38.9
Q ss_pred CCCcEEEEEeCCCCcH----------HHHHHHHHHHHcCCeEEEEeCCCCCcccccc-CEEEEcCCCcc
Q 019775 100 SSDDILVMFSKSGNTE----------ELLKVVPCAKAKGAYLVSVTSVEGNALAAVC-DMNVHLPVERE 157 (336)
Q Consensus 100 ~~~dlvi~iS~sG~~~----------~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~a-d~~i~~~~~~~ 157 (336)
..-|++|++....... .....++.++++|+++|+|-.. .+..+..+ |..+.+.-+++
T Consensus 176 ~~ad~il~~G~N~~~~~~~~~~~~~~~~~~~l~~a~~~G~klivIDPr-~t~ta~~aad~~l~irPGtD 243 (780)
T 1eu1_A 176 ENTDLMVFWAADPMKTNEIGWVIPDHGAYAGMKALKEKGTRVIAINPV-RTETADYFGADVVSPRPQTD 243 (780)
T ss_dssp HHCSEEEEESCCHHHHTTCCSSBCCCHHHHHHHHHHHHTCEEEEESSB-CCHHHHHHTCEEECCCTTCH
T ss_pred hhCCEEEEECCCHHHhcCCCCcccccchHHHHHHHHHCCCeEEEECCC-CCCcccccCCEEeeeCCCCH
Confidence 4567888875432111 2335577788899999999865 55556665 99999877665
No 369
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=40.65 E-value=74 Score=29.64 Aligned_cols=34 Identities=12% Similarity=-0.021 Sum_probs=23.2
Q ss_pred HcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 51 LKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 51 ~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
.+. ++|+|+|.|.+...+. +..|.+.|..|....
T Consensus 17 ~~~-~~i~~iGiGg~Gms~l--A~~l~~~G~~V~~sD 50 (524)
T 3hn7_A 17 FQG-MHIHILGICGTFMGSL--ALLARALGHTVTGSD 50 (524)
T ss_dssp --C-CEEEEETTTSHHHHHH--HHHHHHTTCEEEEEE
T ss_pred ecC-CEEEEEEecHhhHHHH--HHHHHhCCCEEEEEC
Confidence 345 5999999999986542 245567788877654
No 370
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=40.62 E-value=44 Score=22.90 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=45.0
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH--cCCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA--KGAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~--~g~~vi 132 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++ .++++|
T Consensus 3 ~ilivd--d~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~-~~dlvl~D~~l~~~~--g~~~~~~l~~~~~~~~ii 77 (116)
T 3a10_A 3 RILVVD--DEPNIRELLKEELQEEGYEIDTAENGEEALKKFFSG-NYDLVILDIEMPGIS--GLEVAGEIRKKKKDAKII 77 (116)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEECSCCSSSC--HHHHHHHHHHHCTTCCEE
T ss_pred EEEEEe--CCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhcC-CCCEEEEECCCCCCC--HHHHHHHHHccCCCCeEE
Confidence 455554 344556666677777788887776655443333222 3455444 2333332 2345555554 367899
Q ss_pred EEeCCCCC
Q 019775 133 SVTSVEGN 140 (336)
Q Consensus 133 ~IT~~~~s 140 (336)
.+|+....
T Consensus 78 ~~s~~~~~ 85 (116)
T 3a10_A 78 LLTAYSHY 85 (116)
T ss_dssp EEESCGGG
T ss_pred EEECCcch
Confidence 99986543
No 371
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=40.53 E-value=83 Score=24.19 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=16.8
Q ss_pred EEEEeccchHHHHHHHHHHHHh
Q 019775 57 IFFTGVGKSGFVANKISQTLIS 78 (336)
Q Consensus 57 I~i~G~G~s~~~a~~~~~~l~~ 78 (336)
||+-..|.+..+|+.++..+..
T Consensus 19 vY~S~tGnT~~vA~~Ia~~l~~ 40 (171)
T 4ici_A 19 AYFSATGTTARAAEKLGAAVGG 40 (171)
T ss_dssp EECCSSSHHHHHHHHHHHHHTC
T ss_pred EEECCCChHHHHHHHHHHHhCC
Confidence 4444568899999999998853
No 372
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=40.28 E-value=59 Score=28.71 Aligned_cols=39 Identities=13% Similarity=-0.004 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
--..+++.|++.|.+++++..+.++|...+||..+..+.
T Consensus 23 lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~ 61 (377)
T 3orq_A 23 LGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKY 61 (377)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCT
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCC
Confidence 345678899999999999999999999999998877554
No 373
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=39.95 E-value=23 Score=30.70 Aligned_cols=33 Identities=12% Similarity=0.171 Sum_probs=18.3
Q ss_pred CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 98 ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 98 ~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
.+++..+-.+|..+..++.+.+.+ +++.|++++
T Consensus 234 ~ik~~~v~~If~e~~~~~~~~~~i--a~e~g~~v~ 266 (312)
T 2o1e_A 234 YAKEHNVKVIYFEEIASSKVADTL--ASEIGAKTE 266 (312)
T ss_dssp HTTSSCCCEEECSSCCCHHHHHHH--HHHTCCEEE
T ss_pred HHHHcCCCEEEEeCCCChHHHHHH--HHHhCCcEE
Confidence 345555555566666665555544 555566654
No 374
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=39.70 E-value=58 Score=29.88 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=0.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccc--------------cccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALH--------------GDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~--------------~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
++|+|+|.|.|...+ ++..|.+.|..+........-. +....+..-|++|+ |..-+.....
T Consensus 19 ~~i~viG~G~sG~s~--~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~---s~~i~~~~~~ 93 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSG--IAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVV---SSAIKDDNPE 93 (475)
T ss_dssp CEEEEETTTSTTHHH--HHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEE---CTTSCTTCHH
T ss_pred CEEEEEeecHHHHHH--HHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCHHHcCCCCEEEE---CCCCCCCCHH
Q ss_pred HHHHHHcCCeE----------------EEEeCCCC
Q 019775 121 VPCAKAKGAYL----------------VSVTSVEG 139 (336)
Q Consensus 121 ~~~ak~~g~~v----------------i~IT~~~~ 139 (336)
++.|+++|+++ |.||+..+
T Consensus 94 ~~~a~~~~i~vl~~~~~l~~~~~~~~vI~VTGTnG 128 (475)
T 1p3d_A 94 LVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHG 128 (475)
T ss_dssp HHHHHHTTCCEEEHHHHHHHHHHTSEEEEEESSSC
T ss_pred HHHHHHcCCcEEEHHHHHHHHhcCCCEEEEECCCC
No 375
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=39.60 E-value=63 Score=21.56 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=24.6
Q ss_pred cceEEEEcCCCcEEEEeeHHHHHHHHHhcC
Q 019775 242 CGCLLVIDEEYHLIGTFTDGDLRRTLKASG 271 (336)
Q Consensus 242 ~~~ipVvd~~~~~~G~it~~dl~~~~~~~~ 271 (336)
...+=+++++|.-+|+++..+-+......+
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~ 42 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRN 42 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcC
Confidence 456778999999999999999988766533
No 376
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=39.49 E-value=71 Score=31.21 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHhcCCeeeecCCccccccccC-CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 65 SGFVANKISQTLISLGIKSGFLNPLDALHGDIG-ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 65 s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
=..++..+...|..+|+..+.+.+......... -.+..|..-+=+.-|...+..++++.|+++|+.||+
T Consensus 262 ~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~Vil 331 (722)
T 3k1d_A 262 YRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIV 331 (722)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 346777776789999999998876544322111 234556655667788889999999999999999885
No 377
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=39.46 E-value=80 Score=28.64 Aligned_cols=73 Identities=11% Similarity=0.113 Sum_probs=54.6
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEE
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSV 134 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~I 134 (336)
++|-++|. .......++...|..+|+.+..+.+.. -...+..+.+-.+-|+++.+. ..+++.+++.|++.+..
T Consensus 184 ~~VNilG~-~~~~~~~eik~lL~~~Gi~v~~~~~~~-~~~ei~~~~~A~~niv~~~~~-----~~~A~~Le~~GiP~i~~ 256 (437)
T 3aek_A 184 AELIVVGA-LPDVVEDQCLSLLTQLGVGPVRMLPAR-RSDIEPAVGPNTRFILAQPFL-----GETTGALERRGAKRIAA 256 (437)
T ss_dssp CCEEEESC-CCHHHHHHHHHHHHHTTCCCEEEESCS-SGGGCCCBCTTCEEEESSTTC-----HHHHHHHHHTTCEECCC
T ss_pred CcEEEEeC-CChhHHHHHHHHHHHcCCceEEEcCCC-CHHHHHhhhcCcEEEEECccH-----HHHHHHHHHcCCCeEec
Confidence 58999995 655555889999999999998877665 455677788888888887544 34555557788887753
No 378
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=39.24 E-value=1.3e+02 Score=27.47 Aligned_cols=35 Identities=9% Similarity=0.222 Sum_probs=26.5
Q ss_pred HcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc
Q 019775 51 LKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL 89 (336)
Q Consensus 51 ~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~ 89 (336)
... ++|.++|.|. ++.+++..|.+.|..+.++...
T Consensus 192 ~~~-~~vvVIGgG~---ig~E~A~~l~~~g~~Vtlv~~~ 226 (490)
T 2bc0_A 192 KDI-KRVAVVGAGY---IGVELAEAFQRKGKEVVLIDVV 226 (490)
T ss_dssp TTC-CEEEEECCSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCC-ceEEEECCCH---HHHHHHHHHHHCCCeEEEEEcc
Confidence 345 6999999886 4666777788889999887543
No 379
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=39.06 E-value=1.3e+02 Score=23.42 Aligned_cols=59 Identities=15% Similarity=0.165 Sum_probs=43.9
Q ss_pred eEEEE-eccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEE
Q 019775 56 TIFFT-GVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSV 134 (336)
Q Consensus 56 ~I~i~-G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~I 134 (336)
+|-++ |.-+-..+++....-|..+|.+.. +=+.|.-+....+.+.++.++++|+++|..
T Consensus 9 ~V~IimgS~SD~~v~~~a~~~L~~~gi~~e--------------------v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa 68 (174)
T 3lp6_A 9 RVGVIMGSDSDWPVMADAAAALAEFDIPAE--------------------VRVVSAHRTPEAMFSYARGAAARGLEVIIA 68 (174)
T ss_dssp SEEEEESCGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTCHHHHHHHHHHHHHHTCCEEEE
T ss_pred eEEEEECcHHhHHHHHHHHHHHHHcCCCEE--------------------EEEECCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 45444 444456999999999999999731 334677777888999999999999985533
No 380
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=39.01 E-value=42 Score=29.15 Aligned_cols=45 Identities=20% Similarity=0.035 Sum_probs=35.7
Q ss_pred EEEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCc---cccccCEEEEcC
Q 019775 106 VMFSKSGNTEELLKVVPCAKAKGAYLVSVTSVEGNA---LAAVCDMNVHLP 153 (336)
Q Consensus 106 i~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~---l~~~ad~~i~~~ 153 (336)
|.+=.|| --..++..||+.|.+|++++.+.+.| ..++||..+..+
T Consensus 5 I~~lGsg---l~~~~~~aAk~lG~~viv~d~~~~~p~~~a~~~ad~~~~~~ 52 (320)
T 2pbz_A 5 VSTIASH---SSLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAE 52 (320)
T ss_dssp EEEESST---THHHHHHHHHHTTCCEEEEECTTTHHHHHTCTTCSEEEECS
T ss_pred EEEEcCH---hHHHHHHHHHHCCCEEEEEECCCCCccchhhhcCCeEEECC
Confidence 3444455 35677889999999999999998887 778899988876
No 381
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=38.97 E-value=55 Score=24.38 Aligned_cols=31 Identities=13% Similarity=0.088 Sum_probs=22.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNP 88 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~ 88 (336)
++|.++|.|. ++..+...|...|.++..+..
T Consensus 4 ~~vlI~G~G~---vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSI---LAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp SCEEEECCSH---HHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEECCCH---HHHHHHHHHHHCCCCEEEEEC
Confidence 5899999764 456666777777888877653
No 382
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=38.89 E-value=1.4e+02 Score=28.11 Aligned_cols=96 Identities=9% Similarity=0.005 Sum_probs=58.8
Q ss_pred ChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecC--Ccccc----ccccC------------CCC
Q 019775 39 SLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLN--PLDAL----HGDIG------------ILS 100 (336)
Q Consensus 39 ~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~--~~~~~----~~~~~------------~~~ 100 (336)
+.+.+++++++|.+ ++-+++.|.|.....+..+.....++|.++..-. ..... ...+. .+.
T Consensus 210 ~~~~i~~~~~~L~~-~rPvIl~G~g~~~~~~~~l~~lae~~~~PV~~t~~~~~~~~~~~hp~~~g~~~~~~~~~~~~~~~ 288 (578)
T 3lq1_A 210 DDSSIQKMVTECTG-KKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEAEIIDKL 288 (578)
T ss_dssp CHHHHHHHHHHTTT-SCEEEEECSCCCTTCHHHHHHHHHHHTCCEEECGGGSTTSBSSCCSSEECCHHHHTTSHHHHHHT
T ss_pred ChHHHHHHHHHhcc-CCeEEEECCCCChHHHHHHHHHHHhcCcEEEEecCCCCCCCCCCCccccccHHHHhcCccccccC
Confidence 56789999999988 6788888888654335555555556788887631 11110 00111 134
Q ss_pred CCcEEEEEeCCCCcHHHHHHHHHHHH-cCCeEEEEeCCC
Q 019775 101 SDDILVMFSKSGNTEELLKVVPCAKA-KGAYLVSVTSVE 138 (336)
Q Consensus 101 ~~dlvi~iS~sG~~~~~~~~~~~ak~-~g~~vi~IT~~~ 138 (336)
+-|++|.+-..-.+..+.. .++. .++++|-|....
T Consensus 289 ~aDlvl~~G~~~~~~~~~~---~~~~~~~~~~i~id~d~ 324 (578)
T 3lq1_A 289 TPEVVIRFGSMPVSKPLKN---WLEQLSDIRFYVVDPGA 324 (578)
T ss_dssp CCSEEEEESSCCSCHHHHH---HHHHCCSSEEEEECTTC
T ss_pred CCCEEEEeCCcccchhHHH---HHhcCCCCEEEEECCCC
Confidence 6799999876544443332 3333 568888887653
No 383
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=38.86 E-value=47 Score=28.55 Aligned_cols=83 Identities=19% Similarity=0.195 Sum_probs=45.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccc-----------------------ccccCCCCCCcEEEEEeCC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDAL-----------------------HGDIGILSSDDILVMFSKS 111 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~dlvi~iS~s 111 (336)
.+|.|+|.|. ++..++..|.+.|.++.++...... ........+-|++|+..-+
T Consensus 20 ~kI~IiGaGa---~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilavk~ 96 (318)
T 3hwr_A 20 MKVAIMGAGA---VGCYYGGMLARAGHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCVKS 96 (318)
T ss_dssp CEEEEESCSH---HHHHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEECCCG
T ss_pred CcEEEECcCH---HHHHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEEccc
Confidence 5899999885 3444455555667777665321110 0011123455777777666
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEEeCCCCC
Q 019775 112 GNTEELLKVVPCAKAKGAYLVSVTSVEGN 140 (336)
Q Consensus 112 G~~~~~~~~~~~ak~~g~~vi~IT~~~~s 140 (336)
....++++.++..-..+..+|.+++--+.
T Consensus 97 ~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 97 TDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp GGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred ccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 65555554443332345667777765543
No 384
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=38.82 E-value=1.3e+02 Score=26.84 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=26.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccc
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDA 91 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~ 91 (336)
.+++|||.|. ++..++..+..+|+.+.++.+...
T Consensus 205 ~rL~IfGAGh---va~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 205 PRMLVFGAID---FAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CEEEEECCST---HHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCH---HHHHHHHHHHhCCCEEEEECCchh
Confidence 5999999886 566666777788999999875444
No 385
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=38.64 E-value=67 Score=27.16 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=23.2
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCC-eeeecCC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGI-KSGFLNP 88 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~-~~~~~~~ 88 (336)
+++.++|.| .++..+.+.|.+.|. .+...+.
T Consensus 118 k~vlvlGaG---g~g~aia~~L~~~G~~~v~v~~R 149 (277)
T 3don_A 118 AYILILGAG---GASKGIANELYKIVRPTLTVANR 149 (277)
T ss_dssp CCEEEECCS---HHHHHHHHHHHTTCCSCCEEECS
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCCEEEEEeC
Confidence 589999998 456666777788887 6776653
No 386
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=38.63 E-value=35 Score=30.33 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=34.0
Q ss_pred EEeCCCCcHHHHHHHHHHHHcCCeEEEEeCCC-CCccccccCEEEEcCCC
Q 019775 107 MFSKSGNTEELLKVVPCAKAKGAYLVSVTSVE-GNALAAVCDMNVHLPVE 155 (336)
Q Consensus 107 ~iS~sG~~~~~~~~~~~ak~~g~~vi~IT~~~-~s~l~~~ad~~i~~~~~ 155 (336)
++-.+|.. -+.+++.|++.|.++++++... +++-..++|..+.++..
T Consensus 11 lI~g~g~~--~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~ad~~~~~~~~ 58 (403)
T 4dim_A 11 LILGAGRG--QLGLYKAAKELGIHTIAGTMPNAHKPCLNLADEISYMDIS 58 (403)
T ss_dssp EEECCCGG--GHHHHHHHHHHTCEEEEEECSSCCHHHHHHCSEEEECCTT
T ss_pred EEECCcHh--HHHHHHHHHHCCCEEEEEcCCCCCCcchhhCCeEEEecCC
Confidence 33344432 4678899999999999997654 55777889988777643
No 387
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=38.55 E-value=1.4e+02 Score=23.41 Aligned_cols=80 Identities=18% Similarity=0.282 Sum_probs=48.7
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccccc-----------ccC-------CCCCCcEEEEEeCCC----
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHG-----------DIG-------ILSSDDILVMFSKSG---- 112 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~-----------~~~-------~~~~~dlvi~iS~sG---- 112 (336)
.+|.|+| .+..++..+...|.+.|..++.+........ .+. .+..=|.+|-.....
T Consensus 5 ~~ilItG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 5 KKIVLIG--ASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CEEEEET--CCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CEEEEEc--CCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 3788875 5578888999999999988887763211110 000 123346666554333
Q ss_pred -----CcHHHHHHHHHHHHcCCe-EEEEeC
Q 019775 113 -----NTEELLKVVPCAKAKGAY-LVSVTS 136 (336)
Q Consensus 113 -----~~~~~~~~~~~ak~~g~~-vi~IT~ 136 (336)
+..-+..+++.+++.|++ +|.+++
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 223467788899999985 555554
No 388
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=38.55 E-value=63 Score=22.36 Aligned_cols=81 Identities=11% Similarity=0.087 Sum_probs=45.6
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH-cCCeEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA-KGAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~-~g~~vi~ 133 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ +..++.+ -.++++..++ .++++|.
T Consensus 5 ~ilivdd--~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~-~~dlvi~D~~l~~~~--g~~~~~~l~~~~~~~ii~ 79 (123)
T 1xhf_A 5 HILIVED--ELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEY-DINLVIMDINLPGKN--GLLLARELREQANVALMF 79 (123)
T ss_dssp EEEEECS--CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHS-CCSEEEECSSCSSSC--HHHHHHHHHHHCCCEEEE
T ss_pred eEEEEeC--CHHHHHHHHHHHhhCCcEEEEeCCHHHHHHHHhcC-CCCEEEEcCCCCCCC--HHHHHHHHHhCCCCcEEE
Confidence 6666653 34555666777777788887766554433333222 3455443 2333332 2344444443 5789999
Q ss_pred EeCCCCCc
Q 019775 134 VTSVEGNA 141 (336)
Q Consensus 134 IT~~~~s~ 141 (336)
+|+.....
T Consensus 80 ~s~~~~~~ 87 (123)
T 1xhf_A 80 LTGRDNEV 87 (123)
T ss_dssp EESCCSHH
T ss_pred EECCCChH
Confidence 99876543
No 389
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=38.49 E-value=59 Score=22.47 Aligned_cols=81 Identities=10% Similarity=0.080 Sum_probs=45.1
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEE-eCCCCcHHHHHHHHHHHH-cCCeEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMF-SKSGNTEELLKVVPCAKA-KGAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~i-S~sG~~~~~~~~~~~ak~-~g~~vi~ 133 (336)
+|.++. ........+...|...|..+....+.......... .+-|++|+= ..++.+ -.++++..++ .+.++|.
T Consensus 4 ~ilivd--d~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~-~~~dlvi~d~~l~~~~--g~~~~~~l~~~~~~~ii~ 78 (122)
T 1zgz_A 4 HIVIVE--DEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN-QSVDLILLDINLPDEN--GLMLTRALRERSTVGIIL 78 (122)
T ss_dssp EEEEEC--SSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH-SCCSEEEEESCCSSSC--HHHHHHHHHTTCCCEEEE
T ss_pred EEEEEE--CCHHHHHHHHHHHHHCCCeEEEecCHHHHHHHHhc-CCCCEEEEeCCCCCCC--hHHHHHHHHhcCCCCEEE
Confidence 566654 33445566666677778888766655443332222 234655442 334433 2344555544 4688999
Q ss_pred EeCCCCCc
Q 019775 134 VTSVEGNA 141 (336)
Q Consensus 134 IT~~~~s~ 141 (336)
+|+.....
T Consensus 79 ~s~~~~~~ 86 (122)
T 1zgz_A 79 VTGRSDRI 86 (122)
T ss_dssp EESSCCHH
T ss_pred EECCCChh
Confidence 99876543
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=38.41 E-value=1.3e+02 Score=22.93 Aligned_cols=78 Identities=9% Similarity=0.124 Sum_probs=41.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhc-CCeeeecCCccc------------cccc------c-C--CCCCCcEEEEEeCCC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISL-GIKSGFLNPLDA------------LHGD------I-G--ILSSDDILVMFSKSG 112 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~-g~~~~~~~~~~~------------~~~~------~-~--~~~~~dlvi~iS~sG 112 (336)
++|.|+|.|.- +..++..|.+. |.++..+..... .... + . .+.+-|++|+. .+
T Consensus 40 ~~v~IiG~G~~---G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~--~~ 114 (183)
T 3c85_A 40 AQVLILGMGRI---GTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLA--MP 114 (183)
T ss_dssp CSEEEECCSHH---HHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEEC--CS
T ss_pred CcEEEECCCHH---HHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEe--CC
Confidence 48999998863 34444455555 666665532110 0000 0 0 13334555543 34
Q ss_pred CcHHHHHHHHHHHHcC--CeEEEEeCC
Q 019775 113 NTEELLKVVPCAKAKG--AYLVSVTSV 137 (336)
Q Consensus 113 ~~~~~~~~~~~ak~~g--~~vi~IT~~ 137 (336)
.......++..+++.| .++++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 115 HHQGNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp SHHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred ChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4555566667777765 466666654
No 391
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=38.17 E-value=26 Score=25.70 Aligned_cols=50 Identities=22% Similarity=0.299 Sum_probs=31.1
Q ss_pred EEEEEeCCCCcHHHHHHH-HHHHHcCCe--EEEEeCCCCCccccccCEEEEc-CC
Q 019775 104 ILVMFSKSGNTEELLKVV-PCAKAKGAY--LVSVTSVEGNALAAVCDMNVHL-PV 154 (336)
Q Consensus 104 lvi~iS~sG~~~~~~~~~-~~ak~~g~~--vi~IT~~~~s~l~~~ad~~i~~-~~ 154 (336)
+++..|.+|+|+.+.+.+ +.+++.|.. ++-+.......+.+ +|.++.. |+
T Consensus 2 ~I~Y~S~tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~~~~l~~-~d~iiig~pt 55 (138)
T 5nul_A 2 KIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLN-EDILILGCSA 55 (138)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHHTTCCCEEEEGGGCCHHHHTT-CSEEEEEECC
T ss_pred EEEEECCCchHHHHHHHHHHHHHHCCCeEEEEEhhhCCHHHHhh-CCEEEEEcCc
Confidence 467789999999988775 667777765 44444433334433 4555444 44
No 392
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=38.04 E-value=28 Score=25.87 Aligned_cols=49 Identities=22% Similarity=0.248 Sum_probs=30.5
Q ss_pred EEEEEeCCCCcHHHHHHH-HHHHHcCCeEEEEeCC--CCCccccccCEEEEc
Q 019775 104 ILVMFSKSGNTEELLKVV-PCAKAKGAYLVSVTSV--EGNALAAVCDMNVHL 152 (336)
Q Consensus 104 lvi~iS~sG~~~~~~~~~-~~ak~~g~~vi~IT~~--~~s~l~~~ad~~i~~ 152 (336)
+++..|.+|+|+.+.+.+ +.+++.|..+-.+.-. ....+..-+|.++..
T Consensus 5 ~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~l~~~~d~ii~g 56 (148)
T 3f6r_A 5 LIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADASAENLADGYDAVLFG 56 (148)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTTTTTTCSEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhHhcccCCEEEEE
Confidence 567779999999988875 5677788765444332 233444134555444
No 393
>1gdt_A GD resolvase, protein (gamma delta resolvase); protein-DNA complex, double helix, overhanging base, DNA binding protein/DNA complex; 3.00A {Escherichia coli} SCOP: a.4.1.2 c.53.1.1 PDB: 1zr4_A 1zr2_A 2gm4_A 1res_A 1ret_A
Probab=37.78 E-value=29 Score=27.17 Aligned_cols=39 Identities=10% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCCCcEEEEEeC---CCCcHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 99 LSSDDILVMFSK---SGNTEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 99 ~~~~dlvi~iS~---sG~~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.++|++++-+. +++..++...++.++++|+.+++++..
T Consensus 55 ~~~gd~lvv~~ldRl~R~~~~~~~~~~~l~~~gv~l~~~~~~ 96 (183)
T 1gdt_A 55 VEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG 96 (183)
T ss_dssp CCTTCEEEESSGGGTCSSHHHHHHHHHHHHHTTCEEEEGGGC
T ss_pred CCCCCEEEEEecccccCCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 456687777765 445567788888999999999988864
No 394
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=37.68 E-value=22 Score=27.15 Aligned_cols=78 Identities=12% Similarity=0.048 Sum_probs=43.1
Q ss_pred EEEe--ccchHHHHHHHHHHHHhcCCeeeecCCcc--ccccccCCCCCCcEEEEEeCC--CCcHHHHHHHHHHHH---cC
Q 019775 58 FFTG--VGKSGFVANKISQTLISLGIKSGFLNPLD--ALHGDIGILSSDDILVMFSKS--GNTEELLKVVPCAKA---KG 128 (336)
Q Consensus 58 ~i~G--~G~s~~~a~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~~~dlvi~iS~s--G~~~~~~~~~~~ak~---~g 128 (336)
.+|+ .|.+..+|+.++..+...|..+..++-.. ........+.+.|.+|+-|-. |.-+ ....+..++. .|
T Consensus 9 IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p-~~~~l~~l~~~~~~~ 87 (159)
T 3fni_A 9 VFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPAASAAS-IQGALSTILGSVNEK 87 (159)
T ss_dssp EEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHTEEEEEEECCBTTSHHH-HHHHHHHHHHHCCTT
T ss_pred EEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCcCCHHHHHHHHHhCCEEEEEcCcCCCCcc-HHHHHHHHHhhcccC
Confidence 3444 48899999999999999898876654221 111111223345665555432 3323 2344544443 44
Q ss_pred CeEEEEeC
Q 019775 129 AYLVSVTS 136 (336)
Q Consensus 129 ~~vi~IT~ 136 (336)
-++.++.+
T Consensus 88 k~va~fgs 95 (159)
T 3fni_A 88 QAVGIFET 95 (159)
T ss_dssp SEEEEECC
T ss_pred CEEEEEEc
Confidence 55555554
No 395
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=37.58 E-value=73 Score=25.28 Aligned_cols=81 Identities=10% Similarity=0.027 Sum_probs=47.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++. +-.++++.+++. ++++|
T Consensus 9 ~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~-~~dlvllD~~l~~~--~g~~~~~~l~~~~~~~~ii 83 (233)
T 1ys7_A 9 RVLVVD--DDSDVLASLERGLRLSGFEVATAVDGAEALRSATEN-RPDAIVLDINMPVL--DGVSVVTALRAMDNDVPVC 83 (233)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEEESSCSSS--CHHHHHHHHHHTTCCCCEE
T ss_pred eEEEEe--CCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHhC-CCCEEEEeCCCCCC--CHHHHHHHHHhcCCCCCEE
Confidence 566664 334556666777777888887776655543333322 3455443 333443 334566666653 68999
Q ss_pred EEeCCCCCc
Q 019775 133 SVTSVEGNA 141 (336)
Q Consensus 133 ~IT~~~~s~ 141 (336)
.+|+.....
T Consensus 84 ~lt~~~~~~ 92 (233)
T 1ys7_A 84 VLSARSSVD 92 (233)
T ss_dssp EEECCCTTT
T ss_pred EEEcCCCHH
Confidence 999876543
No 396
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=37.44 E-value=1.3e+02 Score=26.65 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchH-HHHHHHHHHHHhcCCeeeecC-Ccccccccc----------CCC--CCCcEEE
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSG-FVANKISQTLISLGIKSGFLN-PLDALHGDI----------GIL--SSDDILV 106 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~~~-~~~~~~~~~----------~~~--~~~dlvi 106 (336)
+.+.++++.+...+++|++||.|... .++.++. +.. .....++. +...+-..+ ..+ .+-|.+|
T Consensus 306 ~~l~~~l~~~k~~gk~v~~yGa~~~g~~l~~~~~--~~~-~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~~~~~~~d~vl 382 (416)
T 4e2x_A 306 DELTALLHRLRAEGRSVVGYGATAKSATVTNFCG--IGP-DLVHSVYDTTPDKQNRLTPGAHIPVRPASAFSDPYPDYAL 382 (416)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHT--CCT-TTSCCEEESCGGGTTEECTTTCCEEEEGGGCCSSCCSEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEccccHHHHHHHhcC--CCc-ceeeEEEeCCccccCccCCCCCCcCCCHHHHhhcCCCEEE
Confidence 45666666666555789999998754 3333332 110 11111221 111100000 001 2346555
Q ss_pred EEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 107 MFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 107 ~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
++ ......++.+-++..+++|.+.|.
T Consensus 383 ~~-~~~~~~ei~~~~~~~~~~g~~~~~ 408 (416)
T 4e2x_A 383 LF-AWNHAEEIMAKEQEFHQAGGRWIL 408 (416)
T ss_dssp ES-CGGGHHHHHHHCHHHHHTTCEEEE
T ss_pred Ee-cchhHHHHHHHHHHHHhcCCEEEE
Confidence 54 555678888888999999999764
No 397
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=37.38 E-value=73 Score=30.44 Aligned_cols=70 Identities=19% Similarity=0.225 Sum_probs=49.9
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccC-CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIG-ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+++.+ ..|..+|++.+.+.+......... -.+.-|..-+=+.-|...+..++++.|+++|++||+
T Consensus 151 G~~~~~~~~L-~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~Vil 221 (618)
T 3m07_A 151 GTFRAAIAKL-PYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVL 221 (618)
T ss_dssp CSHHHHHTTH-HHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHH-HHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEE
Confidence 4334566666 788999999998887654332111 233445555556778889999999999999999986
No 398
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=37.35 E-value=1e+02 Score=24.03 Aligned_cols=59 Identities=15% Similarity=0.166 Sum_probs=43.4
Q ss_pred eEEE-EeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEE
Q 019775 56 TIFF-TGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSV 134 (336)
Q Consensus 56 ~I~i-~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~I 134 (336)
+|-| .|.-+-..+++....-|..+|.+.. +-+.|.-+...++.+.++.++++|+++|..
T Consensus 14 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~e--------------------v~V~SaHR~p~~~~~~~~~a~~~g~~ViIa 73 (174)
T 3kuu_A 14 KIAIVMGSKSDWATMQFAADVLTTLNVPFH--------------------VEVVSAHRTPDRLFSFAEQAEANGLHVIIA 73 (174)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTCHHHHHHHHHHTTTTTCSEEEE
T ss_pred cEEEEECcHHHHHHHHHHHHHHHHcCCCEE--------------------EEEEcccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 4544 4444556999999999999999731 344677777788888889999999885533
No 399
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=37.33 E-value=23 Score=29.21 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCCCCcccccc
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVEGNALAAVC 146 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~a 146 (336)
.++..++++.++++|.+++..|++..-+...+.
T Consensus 24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~ 56 (266)
T 3pdw_A 24 IEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVA 56 (266)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Confidence 467889999999999999999997666654443
No 400
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=37.28 E-value=63 Score=27.44 Aligned_cols=84 Identities=17% Similarity=0.173 Sum_probs=51.8
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-... . .+ +|+=..+-.
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~---------------~-~g--ViaGvg~~~ 76 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV---------------T-HK--LIFQVGSLN 76 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT---------------C-SC--EEEECCCSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH---------------h-CC--eEEeeCCCC
Confidence 3588899999999887664 46777665 444444433333333321110 0 12 333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.+.++.++.|++.|+.-+++...
T Consensus 77 t~~ai~la~~A~~~Gadavlv~~P 100 (288)
T 2nuw_A 77 LNDVMELVKFSNEMDILGVSSHSP 100 (288)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCC
Confidence 799999999999999987766643
No 401
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=37.11 E-value=24 Score=29.09 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=26.4
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCCCCccccc
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVEGNALAAV 145 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ 145 (336)
.+...++++.++++|.+++..|++..-+...+
T Consensus 26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~ 57 (268)
T 3qgm_A 26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRIL 57 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHH
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHH
Confidence 56789999999999999999999766555443
No 402
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=37.04 E-value=87 Score=26.86 Aligned_cols=85 Identities=13% Similarity=0.098 Sum_probs=52.1
Q ss_pred cCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCc
Q 019775 37 HLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 37 ~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~ 114 (336)
.+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-. .....+-.+|+=..+-.+
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~---------------~~~~gr~pviaGvg~~~t 95 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVR---------------QAMPKNRLLLAGSGCEST 95 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHH---------------HTSCTTSEEEEECCCSSH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHH---------------HHcCCCCcEEEecCCCCH
Confidence 578899999999987764 45777765 4444443332333332100 011122234433334578
Q ss_pred HHHHHHHHHHHHcCCeEEEEeC
Q 019775 115 EELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
.+.++.++.|++.|+.-+++..
T Consensus 96 ~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 96 QATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcC
Confidence 9999999999999998776654
No 403
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=37.02 E-value=25 Score=29.40 Aligned_cols=80 Identities=13% Similarity=0.202 Sum_probs=48.7
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCC----ccccccccCCCC--CCcEEEEEeCCCCcHH-------------
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNP----LDALHGDIGILS--SDDILVMFSKSGNTEE------------- 116 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~----~~~~~~~~~~~~--~~dlvi~iS~sG~~~~------------- 116 (336)
+|.|+| .+..++..+...|...|..++.+.. ..........+. .-|.+|-+........
T Consensus 7 ~ilVtG--atG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~ 84 (287)
T 3sc6_A 7 RVIITG--ANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINA 84 (287)
T ss_dssp EEEEES--TTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHT
T ss_pred EEEEEC--CCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHH
Confidence 788886 4557888888899888988887652 111110011122 2466655543322111
Q ss_pred --HHHHHHHHHHcCCeEEEEeCC
Q 019775 117 --LLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 117 --~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+..+++.|++.|+++|.+++.
T Consensus 85 ~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 85 IGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred HHHHHHHHHHHHcCCeEEEEchh
Confidence 466888899999997777753
No 404
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=37.01 E-value=64 Score=23.00 Aligned_cols=27 Identities=26% Similarity=0.208 Sum_probs=19.9
Q ss_pred EEEEecc--chHHHHHHHHHHHHhcCCee
Q 019775 57 IFFTGVG--KSGFVANKISQTLISLGIKS 83 (336)
Q Consensus 57 I~i~G~G--~s~~~a~~~~~~l~~~g~~~ 83 (336)
+.++|.| +|..++.-+...+...|+.+
T Consensus 25 lvvC~sG~gTS~ll~~kl~~~~~~~gi~~ 53 (113)
T 1tvm_A 25 IVACGGAVATSTMAAEEIKELCQSHNIPV 53 (113)
T ss_dssp EEESCSCSSHHHHHHHHHHHHHHHTTCCE
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 4444554 56678999999999988875
No 405
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=36.88 E-value=30 Score=25.79 Aligned_cols=65 Identities=18% Similarity=0.342 Sum_probs=40.4
Q ss_pred EEEEe--ccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEe-CC--CCc-HHHHHHHHHHHH
Q 019775 57 IFFTG--VGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFS-KS--GNT-EELLKVVPCAKA 126 (336)
Q Consensus 57 I~i~G--~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS-~s--G~~-~~~~~~~~~ak~ 126 (336)
..+|+ +|.+..+|+.++..+...|..+..+...+ ...+.+.|.+|+.+ .- |.. +.+...++..+.
T Consensus 5 ~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~-----~~~l~~~d~vi~g~pt~g~g~~p~~~~~f~~~l~~ 75 (147)
T 2hna_A 5 TLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPL-----LEDLPASGIWLVISSTHGAGDIPDNLSPFYEALQE 75 (147)
T ss_dssp EEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECCTT-----SCSSCSEEEEEEECCTTTTCCTTSSCHHHHHHHHH
T ss_pred EEEEECCchHHHHHHHHHHHHHHHCCCceEEecCCC-----HHHcccCCeEEEEECccCCCCCChhHHHHHHHHHh
Confidence 44454 58899999999999998888887664321 23344566655554 33 332 334555565543
No 406
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=36.81 E-value=1.1e+02 Score=24.13 Aligned_cols=85 Identities=12% Similarity=0.114 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCC-CcHHHHHHHHHHHHcCCeEEEEeCCCCCccc
Q 019775 65 SGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSG-NTEELLKVVPCAKAKGAYLVSVTSVEGNALA 143 (336)
Q Consensus 65 s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG-~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 143 (336)
.......+...|...|..+....+.......... .+-|++| .++ ...++++.++.. ..++++|.+|+.......
T Consensus 9 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~-~~~dlvi---lp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~ 83 (223)
T 2hqr_A 9 NSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDI-RNYDLVM---VSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEE 83 (223)
T ss_dssp CHHHHHHHHHHHGGGTCCEEEESSHHHHHHHHTT-SCCSEEE---ECCTTHHHHHHHHHHH-CTTSEEEEEESSCCHHHH
T ss_pred CHHHHHHHHHHHHHCCcEEEEECCHHHHHHHHhc-CCCCEEE---eCCCCHHHHHHHHHhC-CCCCcEEEEECCCCHHHH
Confidence 3455666777777788888877665554433332 2457777 333 233444444433 227999999987654332
Q ss_pred -----cccCEEEEcCC
Q 019775 144 -----AVCDMNVHLPV 154 (336)
Q Consensus 144 -----~~ad~~i~~~~ 154 (336)
.-++-++.-|.
T Consensus 84 ~~~~~~Ga~~~l~Kp~ 99 (223)
T 2hqr_A 84 VHAFEQGADDYIAKPY 99 (223)
T ss_dssp HHHHHHTCSEEEETTC
T ss_pred HHHHHcCCCEEEECCC
Confidence 22455555444
No 407
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=36.79 E-value=1.1e+02 Score=21.71 Aligned_cols=29 Identities=21% Similarity=0.464 Sum_probs=18.7
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
+|.++|.|. ++..++..|.+.|.++..+.
T Consensus 6 ~i~IiG~G~---iG~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 6 YIIIAGIGR---VGYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp EEEEECCSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCH---HHHHHHHHHHhCCCeEEEEE
Confidence 788888765 34455556666677766554
No 408
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=36.55 E-value=70 Score=27.22 Aligned_cols=86 Identities=15% Similarity=0.139 Sum_probs=51.9
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-+++.|+ |.+..+...=..++.+.-... . ..+-.+|+=..+..
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~--~-------------~grvpviaGvg~~~ 80 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKR--A-------------AGRIKVIAGTGGNA 80 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH--H-------------TTSSEEEEECCCSC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH--h-------------CCCCcEEEecCCCC
Confidence 4678899999999987664 46777765 444433333233333221100 0 01122333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
+.+.++.++.|++.|+.-+++..
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 81 THEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEECC
Confidence 79999999999999998776654
No 409
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=36.39 E-value=97 Score=26.19 Aligned_cols=84 Identities=14% Similarity=0.164 Sum_probs=51.3
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-... . .+ +|+=..+..
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~--~--------------~g--vi~Gvg~~~ 75 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA--A--------------RR--VIVQVASLN 75 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH--C--------------SS--EEEECCCSS
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH--h--------------CC--EEEeeCCCC
Confidence 4578889999999887664 45666665 444433333233333221110 0 11 333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.+.++.++.|++.|+.-+.+...
T Consensus 76 t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 76 ADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCC
Confidence 799999999999999987766643
No 410
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=36.15 E-value=40 Score=27.08 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=20.4
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
.+|.|+|.|. ++..++..|.+.|..+..+.
T Consensus 29 ~~I~iiG~G~---~G~~la~~l~~~g~~V~~~~ 58 (215)
T 2vns_A 29 PKVGILGSGD---FARSLATRLVGSGFKVVVGS 58 (215)
T ss_dssp CCEEEECCSH---HHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEccCH---HHHHHHHHHHHCCCEEEEEe
Confidence 3799999875 44455556666777777654
No 411
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=35.99 E-value=71 Score=25.19 Aligned_cols=80 Identities=6% Similarity=-0.023 Sum_probs=46.4
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++. .....+..+...|...|..+....+........... +-|++|+ +..++.+ -.++++.+++. ++++|
T Consensus 4 ~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~-~~dlvllD~~l~~~~--g~~~~~~lr~~~~~~~ii 78 (225)
T 1kgs_A 4 RVLVVE--DERDLADLITEALKKEMFTVDVCYDGEEGMYMALNE-PFDVVILDIMLPVHD--GWEILKSMRESGVNTPVL 78 (225)
T ss_dssp EEEEEC--SSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEEESCCSSSC--HHHHHHHHHHTTCCCCEE
T ss_pred eEEEEe--CCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhcC-CCCEEEEeCCCCCCC--HHHHHHHHHhcCCCCCEE
Confidence 455543 334556666777777788887766655443333222 3455443 3334432 35666666664 68999
Q ss_pred EEeCCCCC
Q 019775 133 SVTSVEGN 140 (336)
Q Consensus 133 ~IT~~~~s 140 (336)
.+|+....
T Consensus 79 ~ls~~~~~ 86 (225)
T 1kgs_A 79 MLTALSDV 86 (225)
T ss_dssp EEESSCHH
T ss_pred EEeCCCCH
Confidence 99987653
No 412
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=35.70 E-value=23 Score=28.30 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=25.8
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccc
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDA 91 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~ 91 (336)
++-+++....+..++|-++|++.-..-+..+...| .+.+..+.+.+.++
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll-~~~i~~~~~~~~~e 130 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAML-GVKIKEFLFSSEDE 130 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHH-TCEEEEEEECSGGG
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHh-CCceEEEEeCCHHH
Confidence 33444444443335888888877655555554443 34444444544443
No 413
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=35.69 E-value=2e+02 Score=24.35 Aligned_cols=114 Identities=4% Similarity=-0.140 Sum_probs=58.4
Q ss_pred cCChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccc-ccccCCCCCCcEEEE--------
Q 019775 37 HLSLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDAL-HGDIGILSSDDILVM-------- 107 (336)
Q Consensus 37 ~~~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~~~dlvi~-------- 107 (336)
.+..+.++...+.+..+ +-+++-|. .. .....+.. ....|..+.+=+..... ......+..-|+++.
T Consensus 121 ~~~~~~~~~~~~~~~~~-~~~~~~~~-~~-~~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 196 (328)
T 3kzh_A 121 AMNTDFIDSKREIFENA-EYTVLDSD-NP-EIMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEIL 196 (328)
T ss_dssp GCCHHHHHHTHHHHHTC-SEEEEESS-CH-HHHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHHHH
T ss_pred hCCHHHHHHHHHhhccC-CEEEEeCC-cH-HHHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHHHH
Confidence 45556666667778888 35555443 33 33333333 44567766553322111 111111222333211
Q ss_pred EeCCC-CcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcCC
Q 019775 108 FSKSG-NTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLPV 154 (336)
Q Consensus 108 iS~sG-~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~~ 154 (336)
+.... ...+..++++.+.++|++.|+||.-..+.+.-..+-...++.
T Consensus 197 ~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 244 (328)
T 3kzh_A 197 AGFPITDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKA 244 (328)
T ss_dssp HTSCCCSHHHHHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEE
T ss_pred HCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecC
Confidence 11111 135667778888889999999998776655433333344433
No 414
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=35.61 E-value=1.4e+02 Score=22.48 Aligned_cols=31 Identities=26% Similarity=0.273 Sum_probs=23.2
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL 89 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~ 89 (336)
+|.|+|.|.+. ..++..|.+.|.++.++...
T Consensus 3 ~vvIIGgG~~G---l~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPSG---LSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHHH---HHHHHHHHHCCCcEEEEeCC
Confidence 68999999754 45566677789999887643
No 415
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=35.53 E-value=82 Score=27.11 Aligned_cols=96 Identities=18% Similarity=0.237 Sum_probs=65.4
Q ss_pred HHcCCCeEEEEeccch----HHHHHHHHHHHHhc-CCeeeecC----CccccccccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 50 LLKCRGTIFFTGVGKS----GFVANKISQTLISL-GIKSGFLN----PLDALHGDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s----~~~a~~~~~~l~~~-g~~~~~~~----~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
|.+| +.|.--|.|.. ..+.+.|+..|..- |-.--.+. +.+.+.......-..++.|.+--||.-..
T Consensus 189 L~~A-~ivVsgGRG~~~~e~f~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQH---- 263 (307)
T 1efp_A 189 LTSA-RRVVSGGRGLGSKESFAIIEELADKLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQH---- 263 (307)
T ss_dssp TTTC-SEEEEECGGGCSSSTTHHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSSSSBCCCCSEEEEESCCCCHHH----
T ss_pred cCCC-CEEEEcCCcCCCHHHHHHHHHHHHHhCCceeecHHHHhCCCCChhhEeccCCcccCCceEEEEeccCcHHH----
Confidence 4577 47777777743 36888888888532 21111111 34445555556667799999999998775
Q ss_pred HHHHHHcCCe-EEEEeCCCCCccccccCEEEEc
Q 019775 121 VPCAKAKGAY-LVSVTSVEGNALAAVCDMNVHL 152 (336)
Q Consensus 121 ~~~ak~~g~~-vi~IT~~~~s~l~~~ad~~i~~ 152 (336)
.+--++.+ ||+|=..++.|+.+.|||-|.-
T Consensus 264 --laGm~~s~~IVAIN~D~~ApIF~~ADygiVg 294 (307)
T 1efp_A 264 --LAGMKDSKVIVAINKDEEAPIFQIADYGLVG 294 (307)
T ss_dssp --HTTTTTCSEEEEEESCTTCGGGGTCSEEEES
T ss_pred --HhhhccCCEEEEEeCCCCCCcccccCeEEee
Confidence 33345555 7788888999999999999874
No 416
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=35.28 E-value=1.9e+02 Score=27.03 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=23.4
Q ss_pred CCCCcEEEEEeCC--CCcHHHHHHHHHHHHcCCeEEE
Q 019775 99 LSSDDILVMFSKS--GNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 99 ~~~~dlvi~iS~s--G~~~~~~~~~~~ak~~g~~vi~ 133 (336)
+.++|.+|+-|.. |+...+.+++....+.|++|+.
T Consensus 321 ~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~ 357 (555)
T 3zq4_A 321 INPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIH 357 (555)
T ss_dssp CCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEEC
T ss_pred cCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEe
Confidence 4567777666653 6555566667777888888764
No 417
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=35.24 E-value=20 Score=31.32 Aligned_cols=53 Identities=19% Similarity=0.145 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHc--CCCeEEEEeccchHHHHH
Q 019775 18 NTLLDLFKSQQDHLNYFFQHLSLPHTLTFTQTLLK--CRGTIFFTGVGKSGFVAN 70 (336)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~i~~--a~~~I~i~G~G~s~~~a~ 70 (336)
+.+.+++......-..-.+.++...+++++++|.. +++-|++.|.|.|...+-
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~a~~ivvltGAGiSt~SGI 60 (323)
T 1j8f_A 6 DFLRNLFSQTLSLGSQKERLLDELTLEGVARYMQSERCRRVICLVGAGISTSAGI 60 (323)
T ss_dssp HHHHHHC-----------CCCSSSSHHHHHHHHHSTTCCCEEEEECGGGTGGGTC
T ss_pred HHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHHHhcCCCcEEEEecchhhHhhCC
Confidence 33444444333332233344566779999999985 655677889998876553
No 418
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=35.21 E-value=25 Score=31.98 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=46.0
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccC------CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIG------ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~------~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+++.+ ..|..+|+..+.+.+.......-. -....|..-+=+..|...+..++++.|+++|++||+
T Consensus 27 G~~~~i~~~l-~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~ 102 (449)
T 3dhu_A 27 GNFAGVTADL-QRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVML 102 (449)
T ss_dssp CSHHHHHTTH-HHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHhH-HHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4444666666 788899999998886543211100 012222222235678889999999999999999885
No 419
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=35.07 E-value=81 Score=22.38 Aligned_cols=77 Identities=13% Similarity=0.098 Sum_probs=43.5
Q ss_pred eEEEEeccc-hHHHHHHHHHHHHhcCCeeeecC-CccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 56 TIFFTGVGK-SGFVANKISQTLISLGIKSGFLN-PLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~-s~~~a~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
-+.++|.|. |..++.-+.......|.++.... +..... ..+.+-|++++-=+-++.. -++-+.+.+.|+++..
T Consensus 9 IlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~---~~~~~~DvvLLgPQV~y~~--~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 9 VLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHY---DIMGVYDLIILAPQVRSYY--REMKVDAERLGIQIVA 83 (108)
T ss_dssp EEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCT---TTGGGCSEEEECGGGGGGH--HHHHHHHTTTTCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHH---hhccCCCEEEEChHHHHHH--HHHHHHhhhcCCcEEE
Confidence 344556665 44777777777777798876643 222222 2233458877633333222 2233445667999988
Q ss_pred EeCC
Q 019775 134 VTSV 137 (336)
Q Consensus 134 IT~~ 137 (336)
|-..
T Consensus 84 I~~~ 87 (108)
T 3nbm_A 84 TRGM 87 (108)
T ss_dssp CCHH
T ss_pred eCHH
Confidence 8653
No 420
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=35.06 E-value=1.1e+02 Score=22.26 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=17.4
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCCeeee
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGIKSGF 85 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~~~~~ 85 (336)
+++.++|.|... .++..+... .|+.+..
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~---~g~~vvg 33 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG---KEFHPIA 33 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS---SSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCcEEEE
Confidence 689999999755 555554331 2555543
No 421
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=35.05 E-value=90 Score=25.84 Aligned_cols=79 Identities=18% Similarity=0.176 Sum_probs=46.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcc---------------ccccccCCCCC-CcEEEEEeCC-------
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLD---------------ALHGDIGILSS-DDILVMFSKS------- 111 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~---------------~~~~~~~~~~~-~dlvi~iS~s------- 111 (336)
.+|.|+|. ..++..+...|.+.|..+..+.... ........+.. -|.+|-+...
T Consensus 4 ~~ilVtGa---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~ 80 (286)
T 3gpi_A 4 SKILIAGC---GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDEH 80 (286)
T ss_dssp CCEEEECC---SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC---
T ss_pred CcEEEECC---CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHHH
Confidence 48999984 4788888899988888887654211 00000111222 4666654321
Q ss_pred ---CCcHHHHHHHHHHHHcCCe-EEEEeC
Q 019775 112 ---GNTEELLKVVPCAKAKGAY-LVSVTS 136 (336)
Q Consensus 112 ---G~~~~~~~~~~~ak~~g~~-vi~IT~ 136 (336)
-+..-+..+++.|++.|++ +|.+++
T Consensus 81 ~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 81 YRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp --CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 1223477888888888865 555554
No 422
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=35.03 E-value=98 Score=27.36 Aligned_cols=79 Identities=8% Similarity=0.096 Sum_probs=50.0
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccc-----------------c--CCCCCCcEEEEEeCCCCcH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGD-----------------I--GILSSDDILVMFSKSGNTE 115 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~-----------------~--~~~~~~dlvi~iS~sG~~~ 115 (336)
.+++|||.|. +|..++.....+|+.+.++.+....... . ..+++++.+++++++...
T Consensus 200 ~~L~I~GaGh---va~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~~~p~~~~~~~~~~~~t~vvv~TH~h~~- 275 (362)
T 3on5_A 200 ERLIIFGAGP---DVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIVDFPADFLRKFLIRPDDFVLIMTHHFQK- 275 (362)
T ss_dssp EEEEEECCST---THHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEESCHHHHHHHSCCCTTCEEEECCSCHHH-
T ss_pred CEEEEECCCH---HHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEecCCHHHHHhhcCCCCCeEEEEEeCCchh-
Confidence 4899999886 4555555566679999887653332110 0 025678888888887433
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVE 138 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~ 138 (336)
=..+++.+-+.++.-|.+-++.
T Consensus 276 -D~~~L~~aL~~~~~YiG~iGSr 297 (362)
T 3on5_A 276 -DQEILHFLLEKELRYIGILGSK 297 (362)
T ss_dssp -HHHHHHHHSSSCCSEEEESSCH
T ss_pred -hHHHHHHHhcCCCCEEEEeCCH
Confidence 2455566666677777666543
No 423
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=35.01 E-value=97 Score=26.75 Aligned_cols=96 Identities=17% Similarity=0.235 Sum_probs=65.4
Q ss_pred HHcCCCeEEEEeccch----HHHHHHHHHHHHhc-CCeeeecC----CccccccccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 50 LLKCRGTIFFTGVGKS----GFVANKISQTLISL-GIKSGFLN----PLDALHGDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s----~~~a~~~~~~l~~~-g~~~~~~~----~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
|.+| +.|.--|.|.. ..+.+.|+..|..- |-.--.+. +.+.+.......-..++.|.+--||.-..
T Consensus 194 L~~A-~ivVsgGrG~~~~e~f~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQH---- 268 (315)
T 1efv_A 194 LTGA-KVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQH---- 268 (315)
T ss_dssp GGGC-SEEEEECGGGCSTGGGHHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHH----
T ss_pred cCCC-CEEEEcCCcCCChHHHHHHHHHHHHhCCceeecHHHHhCCCCCHHheeccCCcccCcceEEEecccCcHHH----
Confidence 5677 47777777742 36778888887532 21111111 34445555556667799999999998775
Q ss_pred HHHHHHcCCe-EEEEeCCCCCccccccCEEEEc
Q 019775 121 VPCAKAKGAY-LVSVTSVEGNALAAVCDMNVHL 152 (336)
Q Consensus 121 ~~~ak~~g~~-vi~IT~~~~s~l~~~ad~~i~~ 152 (336)
.+--++.+ ||+|=..++.|+.+.|||-|.-
T Consensus 269 --laGm~~s~~IVAIN~D~~ApIf~~ADygiVg 299 (315)
T 1efv_A 269 --LAGMKDSKTIVAINKDPEAPIFQVADYGIVA 299 (315)
T ss_dssp --HTTTTTCSEEEEEESCTTCGGGGTCSEEEES
T ss_pred --HhhcccCCEEEEEeCCCCCCcchhcCeEEee
Confidence 33345555 7788888999999999999874
No 424
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=34.96 E-value=1.3e+02 Score=25.11 Aligned_cols=40 Identities=8% Similarity=-0.041 Sum_probs=28.5
Q ss_pred CCcEEEEEeCCCCcH-HHHHHHHHHHHcCC---eEEEEeCCCCC
Q 019775 101 SDDILVMFSKSGNTE-ELLKVVPCAKAKGA---YLVSVTSVEGN 140 (336)
Q Consensus 101 ~~dlvi~iS~sG~~~-~~~~~~~~ak~~g~---~vi~IT~~~~s 140 (336)
+.+.+++=..|.+|. +.....+.++++|. ++++||+..--
T Consensus 113 p~~~IllE~~S~nT~ENa~~s~~ll~~~g~~~~~iiLVTs~~Hm 156 (266)
T 3ca8_A 113 PHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQ 156 (266)
T ss_dssp CGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEECCTTTH
T ss_pred CHHHEEeCCCCccHHHHHHHHHHHHHhcCCCCCeEEEECChhHH
Confidence 345567778888885 56666778888876 78888876443
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=34.95 E-value=60 Score=27.94 Aligned_cols=30 Identities=20% Similarity=0.311 Sum_probs=21.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCC--eeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGI--KSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~--~~~~~~ 87 (336)
.+|-|+|.|. ++..++..|.+.|. .+..++
T Consensus 34 ~kI~IIG~G~---mG~slA~~l~~~G~~~~V~~~d 65 (314)
T 3ggo_A 34 QNVLIVGVGF---MGGSFAKSLRRSGFKGKIYGYD 65 (314)
T ss_dssp SEEEEESCSH---HHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEEeeCH---HHHHHHHHHHhCCCCCEEEEEE
Confidence 4899999875 55555666677787 676665
No 426
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=34.92 E-value=56 Score=24.19 Aligned_cols=82 Identities=12% Similarity=0.067 Sum_probs=47.3
Q ss_pred eEEEEeccchH--HHHHHHHHHHHhcCCeeeecCC---ccccccccCCCCCCcEEEEEeCCCCc-HHHHHHHHHHHHcCC
Q 019775 56 TIFFTGVGKSG--FVANKISQTLISLGIKSGFLNP---LDALHGDIGILSSDDILVMFSKSGNT-EELLKVVPCAKAKGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~--~~a~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~~~~dlvi~iS~sG~~-~~~~~~~~~ak~~g~ 129 (336)
+|++.-.|.-. .=+..++..|...|+.++.+.. .+.+....... +-|++.+-+..+.+ ..+.++++.++++|.
T Consensus 5 ~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~-~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~ 83 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIET-KADAILVSSLYGQGEIDCKGLRQKCDEAGL 83 (137)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHH-TCSEEEEEECSSTHHHHHTTHHHHHHHTTC
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhc-CCCEEEEEecCcCcHHHHHHHHHHHHhcCC
Confidence 66665555422 4456667777788999996642 33333222222 34555555545554 447778888888875
Q ss_pred --eEEEEeCCC
Q 019775 130 --YLVSVTSVE 138 (336)
Q Consensus 130 --~vi~IT~~~ 138 (336)
..|.+-+..
T Consensus 84 ~~i~v~vGG~~ 94 (137)
T 1ccw_A 84 EGILLYVGGNI 94 (137)
T ss_dssp TTCEEEEEESC
T ss_pred CCCEEEEECCC
Confidence 344566543
No 427
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=34.80 E-value=68 Score=24.53 Aligned_cols=94 Identities=13% Similarity=0.091 Sum_probs=54.5
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH--cCCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA--KGAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~--~g~~vi 132 (336)
+|.++. ........+...|...|..+....++......+... +-|++|+ +..++.+ -.++++.+++ .++++|
T Consensus 9 ~iLivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~-~~dlvl~D~~lp~~~--g~~~~~~l~~~~~~~~ii 83 (184)
T 3rqi_A 9 NFLVID--DNEVFAGTLARGLERRGYAVRQAHNKDEALKLAGAE-KFEFITVXLHLGNDS--GLSLIAPLCDLQPDARIL 83 (184)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHTTS-CCSEEEECSEETTEE--SHHHHHHHHHHCTTCEEE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhhC-CCCEEEEeccCCCcc--HHHHHHHHHhcCCCCCEE
Confidence 666664 344566777777888898887777666554444333 3455444 3334332 2344444444 468999
Q ss_pred EEeCCCCCccc-----cccCEEEEcCC
Q 019775 133 SVTSVEGNALA-----AVCDMNVHLPV 154 (336)
Q Consensus 133 ~IT~~~~s~l~-----~~ad~~i~~~~ 154 (336)
.+|+....... .-++.++.-|.
T Consensus 84 ~lt~~~~~~~~~~a~~~Ga~~~l~KP~ 110 (184)
T 3rqi_A 84 VLTGYASIATAVQAVKDGADNYLAKPA 110 (184)
T ss_dssp EEESSCCHHHHHHHHHHTCSEEEESSC
T ss_pred EEeCCCCHHHHHHHHHhCHHHheeCCC
Confidence 99997655332 22455555444
No 428
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.78 E-value=50 Score=23.73 Aligned_cols=81 Identities=6% Similarity=-0.061 Sum_probs=45.9
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHHc--CCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKAK--GAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~~--g~~vi 132 (336)
+|.++.-.. .....+...|...|..+....+........... +-|++|+ +..++.+ -.++++.+++. ++++|
T Consensus 6 ~ILivdd~~--~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlvllD~~l~~~~--g~~l~~~l~~~~~~~~ii 80 (137)
T 3cfy_A 6 RVLLVEDST--SLAILYKQYVKDEPYDIFHVETGRDAIQFIERS-KPQLIILDLKLPDMS--GEDVLDWINQNDIPTSVI 80 (137)
T ss_dssp EEEEECSCT--THHHHHHHHTTTSSSEEEEESSHHHHHHHHHHH-CCSEEEECSBCSSSB--HHHHHHHHHHTTCCCEEE
T ss_pred eEEEEeCCH--HHHHHHHHHHHhcCceEEEeCCHHHHHHHHHhc-CCCEEEEecCCCCCC--HHHHHHHHHhcCCCCCEE
Confidence 676665433 345566666777788877666555443333222 3355443 3334433 34556666654 57899
Q ss_pred EEeCCCCCc
Q 019775 133 SVTSVEGNA 141 (336)
Q Consensus 133 ~IT~~~~s~ 141 (336)
.+|+.....
T Consensus 81 ~ls~~~~~~ 89 (137)
T 3cfy_A 81 IATAHGSVD 89 (137)
T ss_dssp EEESSCCHH
T ss_pred EEEecCcHH
Confidence 999876543
No 429
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=34.65 E-value=1.8e+02 Score=25.85 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=40.2
Q ss_pred HhcCCeeeecCCccccccccCCCCCCcEEEEEeC----CCCcHHHHHHHHHHHH--cCCeEEEEeCCCC------Ccccc
Q 019775 77 ISLGIKSGFLNPLDALHGDIGILSSDDILVMFSK----SGNTEELLKVVPCAKA--KGAYLVSVTSVEG------NALAA 144 (336)
Q Consensus 77 ~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~----sG~~~~~~~~~~~ak~--~g~~vi~IT~~~~------s~l~~ 144 (336)
.+.|..+..++.. +.......++++.-+|++.. .|...++-++++.|++ +|+.++ .++.. .|+.-
T Consensus 143 ~~~G~~v~~v~~~-d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~li--vD~a~a~~~~~~p~~~ 219 (415)
T 2fq6_A 143 SKLGVTTSWFDPL-IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIM--IDNTWAAGVLFKALDF 219 (415)
T ss_dssp GGGTCEEEEECTT-CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEE--EECTTTTTTSSCGGGG
T ss_pred HHcCcEEEEECCC-CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEE--EECCCcccccCCcccc
Confidence 3446666555321 11222223444433444432 3556778899999999 887655 34332 24444
Q ss_pred ccCEEEEcCC
Q 019775 145 VCDMNVHLPV 154 (336)
Q Consensus 145 ~ad~~i~~~~ 154 (336)
-+|+++...+
T Consensus 220 g~Div~~S~s 229 (415)
T 2fq6_A 220 GIDVSIQAAT 229 (415)
T ss_dssp TCSEEEEETT
T ss_pred CCeEEEEeCc
Confidence 4677765543
No 430
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=34.57 E-value=86 Score=29.04 Aligned_cols=65 Identities=25% Similarity=0.274 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEE------------EEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILV------------MFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi------------~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..+++.+ ..|..+|+..+.+.+......... ..=|..= +=+.-|...+..++++.|+++|++||+
T Consensus 24 ~gi~~~L-dyLk~LGvt~IwL~Pi~~~~~~~~--~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~Vil 100 (515)
T 1hvx_A 24 TKVANEA-NNLSSLGITALWLPPAYKGTSRSD--VGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYA 100 (515)
T ss_dssp HHHHHHH-HHHHHTTCCEEEECCCSEESSTTC--CSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHH-HHHHhcCCCEEEeCCcccCCCCCC--CCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3566766 788999999999887544221000 0001100 113458889999999999999999884
No 431
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=34.54 E-value=2.4e+02 Score=24.84 Aligned_cols=71 Identities=17% Similarity=0.160 Sum_probs=43.0
Q ss_pred HHHHHHHHHHc-CCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHH
Q 019775 42 HTLTFTQTLLK-CRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKV 120 (336)
Q Consensus 42 ~i~~~~~~i~~-a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~ 120 (336)
+..++-..+.. . +++.++|.|.+ +.+++..|.+.|..+.++........ ....+++.+.
T Consensus 140 d~~~l~~~~~~~~-~~vvViGgG~~---g~e~A~~l~~~g~~Vtvv~~~~~~l~----------------~~~~~~~~~~ 199 (415)
T 3lxd_A 140 DADRLMAELDAGA-KNAVVIGGGYI---GLEAAAVLTKFGVNVTLLEALPRVLA----------------RVAGEALSEF 199 (415)
T ss_dssp HHHHHHHHHHTTC-CEEEEECCSHH---HHHHHHHHHHTTCEEEEEESSSSTTT----------------TTSCHHHHHH
T ss_pred HHHHHHHHhhhcC-CeEEEECCCHH---HHHHHHHHHhcCCeEEEEecCCchhh----------------hhcCHHHHHH
Confidence 33444444555 6 59999998864 55667778888988887654332210 1123444444
Q ss_pred -HHHHHHcCCeEE
Q 019775 121 -VPCAKAKGAYLV 132 (336)
Q Consensus 121 -~~~ak~~g~~vi 132 (336)
.+.++++|++++
T Consensus 200 l~~~l~~~GV~i~ 212 (415)
T 3lxd_A 200 YQAEHRAHGVDLR 212 (415)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHhCCCEEE
Confidence 456777887665
No 432
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=34.40 E-value=69 Score=30.13 Aligned_cols=70 Identities=23% Similarity=0.230 Sum_probs=49.4
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccC-CCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIG-ILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.=..+++.+ ..|..+|+..+.+.+......... -....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 116 G~~~~~~~~l-~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~Vil 186 (558)
T 3vgf_A 116 GTFEGVIRKL-DYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVIL 186 (558)
T ss_dssp CSHHHHHHTH-HHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHH-HHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEE
Confidence 4334556655 788899999998887654332211 234445555556678889999999999999999986
No 433
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=34.40 E-value=1.2e+02 Score=21.33 Aligned_cols=81 Identities=11% Similarity=0.015 Sum_probs=46.1
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH--cCCeEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA--KGAYLV 132 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~--~g~~vi 132 (336)
+|.++. ........+...|...|..+....+........... +-|++|+ +..++.+ -.++++.+++ .++++|
T Consensus 5 ~Ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~-~~dlvl~D~~l~~~~--g~~~~~~l~~~~~~~~ii 79 (132)
T 3crn_A 5 RILIVD--DDTAILDSTKQILEFEGYEVEIAATAGEGLAKIENE-FFNLALFXIKLPDME--GTELLEKAHKLRPGMKKI 79 (132)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEECSBCSSSB--HHHHHHHHHHHCTTSEEE
T ss_pred EEEEEe--CCHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHhcC-CCCEEEEecCCCCCc--hHHHHHHHHhhCCCCcEE
Confidence 566654 344555666677777788887766655433333222 3455444 3344433 2345555554 468999
Q ss_pred EEeCCCCCc
Q 019775 133 SVTSVEGNA 141 (336)
Q Consensus 133 ~IT~~~~s~ 141 (336)
.+|+.....
T Consensus 80 ~~s~~~~~~ 88 (132)
T 3crn_A 80 MVTGYASLE 88 (132)
T ss_dssp EEESCCCHH
T ss_pred EEeccccHH
Confidence 999876543
No 434
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=34.31 E-value=79 Score=27.90 Aligned_cols=38 Identities=16% Similarity=0.138 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
--..+++.+++.|.+++++..+.++|...++|..+...
T Consensus 25 ~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~ 62 (389)
T 3q2o_A 25 LGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVAS 62 (389)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecC
Confidence 46777889999999999999998899999999877643
No 435
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=34.25 E-value=1.1e+02 Score=25.94 Aligned_cols=84 Identities=7% Similarity=0.113 Sum_probs=51.0
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-.. .. .+ +|+=..+-.
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~---------------~~-~g--viaGvg~~~ 76 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYD---------------VT-NK--IIFQVGGLN 76 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHT---------------TC-SC--EEEECCCSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH---------------Hc-CC--EEEecCCCC
Confidence 3588899999999887664 45777665 44444433323333322110 00 11 333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.+.++.++.|++.|+.-+++...
T Consensus 77 t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 77 LDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp HHHHHHHHHHGGGSCCSEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCC
Confidence 799999999999999986666543
No 436
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=34.09 E-value=75 Score=25.43 Aligned_cols=76 Identities=17% Similarity=0.102 Sum_probs=45.3
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeC-CCCcHH---HHHHHHHHHHcCCe
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSK-SGNTEE---LLKVVPCAKAKGAY 130 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~-sG~~~~---~~~~~~~ak~~g~~ 130 (336)
-||.++-.|.++ ...+...|.+.|..+..++..... ..+.+=|.+|+--. +|...+ .-.+.+.+.++|.+
T Consensus 14 ~~i~~id~~~~~--~~~~~~~l~~~G~~~~vv~~~~~~----~~l~~~DglIl~GG~p~~~~~~~~~~~l~~~~~~~~~P 87 (212)
T 2a9v_A 14 LKIYVVDNGGQW--THREWRVLRELGVDTKIVPNDIDS----SELDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYP 87 (212)
T ss_dssp CBEEEEEESCCT--TCHHHHHHHHTTCBCCEEETTSCG----GGGTTCSEEEEEEECSCGGGTGGGHHHHHHHHHHCCSC
T ss_pred ceEEEEeCCCcc--HHHHHHHHHHCCCEEEEEeCCCCH----HHHhCCCEEEECCCCCCCCcccccchhHHHHHHhCCCC
Confidence 378888888877 334566777788888776532211 12223455554433 233322 34455667788899
Q ss_pred EEEEeC
Q 019775 131 LVSVTS 136 (336)
Q Consensus 131 vi~IT~ 136 (336)
++.|+-
T Consensus 88 iLGIC~ 93 (212)
T 2a9v_A 88 ILGICV 93 (212)
T ss_dssp EEEETH
T ss_pred EEEECh
Confidence 999874
No 437
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=34.06 E-value=2e+02 Score=24.24 Aligned_cols=90 Identities=11% Similarity=0.034 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCC--CCCcEEEEEeC---CCCcH
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGIL--SSDDILVMFSK---SGNTE 115 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~--~~~dlvi~iS~---sG~~~ 115 (336)
+.+..++..+.+.+++|++...+..... +...+...|..+..++-..........+ .+..++++.+. +|...
T Consensus 62 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~v~~~~~~nptG~~~ 138 (352)
T 1iug_A 62 LAMEALVKNLFAPGERVLVPVYGKFSER---FYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLLVHSETSTGALA 138 (352)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHH---HHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEEESEETTTTEEC
T ss_pred HHHHHHHHhccCCCCeEEEEeCCchhHH---HHHHHHHcCCceEEEeCCCCCCCCHHHHhccCCcEEEEEEecCCcceec
Confidence 4566666665444356666655433321 2222344677776654211110111112 22345544433 36666
Q ss_pred HHHHHHHHHHHc--CCeEEE
Q 019775 116 ELLKVVPCAKAK--GAYLVS 133 (336)
Q Consensus 116 ~~~~~~~~ak~~--g~~vi~ 133 (336)
.+.++++.|+++ |+.+|.
T Consensus 139 ~l~~i~~l~~~~~~~~~li~ 158 (352)
T 1iug_A 139 DLPALARAFKEKNPEGLVGA 158 (352)
T ss_dssp CHHHHHHHHHHHCTTCEEEE
T ss_pred CHHHHHHHHHhhCCCCEEEE
Confidence 788889999999 876654
No 438
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=33.99 E-value=2.3e+02 Score=24.56 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=27.5
Q ss_pred HHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCC
Q 019775 48 QTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNP 88 (336)
Q Consensus 48 ~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~ 88 (336)
+.+... +++.++|.|.+ +.+++..|.+.|..+.++..
T Consensus 140 ~~~~~~-~~v~ViGgG~~---g~e~A~~l~~~g~~Vtlv~~ 176 (384)
T 2v3a_A 140 QAAAGK-RRVLLLGAGLI---GCEFANDLSSGGYQLDVVAP 176 (384)
T ss_dssp HHHTTC-CEEEEECCSHH---HHHHHHHHHHTTCEEEEEES
T ss_pred HhhccC-CeEEEECCCHH---HHHHHHHHHhCCCeEEEEec
Confidence 344456 59999998864 56677788888999887754
No 439
>2r0q_C Putative transposon TN552 DNA-invertase BIN3; site-specific recombinase, resolvase, DNA-binding protein, protein-DNA complex, DNA integration, DNA invertase, DNA recombination; 3.20A {Staphylococcus aureus}
Probab=33.95 E-value=28 Score=27.94 Aligned_cols=40 Identities=20% Similarity=0.197 Sum_probs=30.0
Q ss_pred CCCCCcEEEEEeC---CCCcHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 98 ILSSDDILVMFSK---SGNTEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 98 ~~~~~dlvi~iS~---sG~~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
.+.++|++++-+. +++..++...++.++++|+.+++++..
T Consensus 52 ~~~~gd~lvv~~ldRL~R~~~~~~~~~~~l~~~gv~l~~~~~~ 94 (209)
T 2r0q_C 52 FVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLP 94 (209)
T ss_dssp HCCTTCEEEESSGGGGCSSHHHHHHHHHHHHHHTCEEEETTST
T ss_pred HhhCCCEEEEeecccccCCHHHHHHHHHHHHHCCCEEEEccCC
Confidence 3456688887766 445567777888999999999988753
No 440
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=33.89 E-value=1.5e+02 Score=23.22 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=47.3
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccc-c-----------------ccccCCCCCCcEEEEEeCCC-----
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDA-L-----------------HGDIGILSSDDILVMFSKSG----- 112 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~-~-----------------~~~~~~~~~~dlvi~iS~sG----- 112 (336)
+|.|+| .+..++..+...|.+.|..+..+..... . ......+..=|++|-.....
T Consensus 2 ~ilItG--atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~~ 79 (219)
T 3dqp_A 2 KIFIVG--STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLL 79 (219)
T ss_dssp EEEEES--TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSCC
T ss_pred eEEEEC--CCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCcE
Confidence 577776 4567888888888888888876542111 0 00111233446666554433
Q ss_pred --CcHHHHHHHHHHHHcCCe-EEEEeC
Q 019775 113 --NTEELLKVVPCAKAKGAY-LVSVTS 136 (336)
Q Consensus 113 --~~~~~~~~~~~ak~~g~~-vi~IT~ 136 (336)
+..-+..+++.+++.|.+ +|.+++
T Consensus 80 ~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 80 KVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 234477888888998875 555554
No 441
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=33.83 E-value=1.6e+02 Score=24.96 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=20.1
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
+||=|+|.|. ++..++..|.+-|.++..++
T Consensus 6 ~kIgfIGLG~---MG~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGN---LGTPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCST---THHHHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHH---HHHHHHHHHHHCCCeEEEEe
Confidence 4899999986 34445556666777777655
No 442
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=33.79 E-value=1.2e+02 Score=24.49 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=41.7
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccc----c-cccCCC-CCCcEEEEEeCCCCcHHHHHHHHHHHHcCC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDAL----H-GDIGIL-SSDDILVMFSKSGNTEELLKVVPCAKAKGA 129 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~----~-~~~~~~-~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~ 129 (336)
||-++|.|. ++..+...|..-|..+..+.+.+.- . .....+ .+-|++++++... ...+.+..+-+.|.
T Consensus 2 ~vgiIG~G~---mG~~~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~~~---~~~~~~~~~l~~G~ 75 (236)
T 2dc1_A 2 LVGLIGYGA---IGKFLAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQQ---AVKDYAEKILKAGI 75 (236)
T ss_dssp EEEEECCSH---HHHHHHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSCHH---HHHHHHHHHHHTTC
T ss_pred EEEEECCCH---HHHHHHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCCHH---HHHHHHHHHHHCCC
Confidence 688999986 4444445555567776433222210 0 001112 3557777776533 45555667777888
Q ss_pred eEEEEeC
Q 019775 130 YLVSVTS 136 (336)
Q Consensus 130 ~vi~IT~ 136 (336)
.++.-+.
T Consensus 76 ~vv~~~~ 82 (236)
T 2dc1_A 76 DLIVLST 82 (236)
T ss_dssp EEEESCG
T ss_pred cEEEECc
Confidence 7776653
No 443
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=33.78 E-value=29 Score=24.12 Aligned_cols=81 Identities=9% Similarity=0.076 Sum_probs=45.7
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~vi~ 133 (336)
+|.++.-.. .....+...|...|..+....+........... +-|++|+ ...-...+-.++++..++. ++++|.
T Consensus 5 ~ilivdd~~--~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~-~~dlvi~-d~~~~~~~g~~~~~~l~~~~~~~~ii~ 80 (124)
T 1dc7_A 5 IVWVVDDDS--SIRWVLERALAGAGLTCTTFENGNEVLAALASK-TPDVLLS-DIRMPGMDGLALLKQIKQRHPMLPVII 80 (124)
T ss_dssp CCEEECSSS--SHHHHHHHHHTTTTCCCEECCCTTHHHHHSSSC-CCSCEEE-CSCSSHHHHCSTHHHHHHHCTTSCCCC
T ss_pred EEEEEeCCH--HHHHHHHHHHHhCCcEEEEeCCHHHHHHHHhcC-CCCEEEE-eeecCCCCHHHHHHHHHhhCCCCCEEE
Confidence 566665333 345556666777788887776655544433332 3455443 3332233334555555553 578999
Q ss_pred EeCCCCC
Q 019775 134 VTSVEGN 140 (336)
Q Consensus 134 IT~~~~s 140 (336)
+|+....
T Consensus 81 ~s~~~~~ 87 (124)
T 1dc7_A 81 MTAHSDL 87 (124)
T ss_dssp BCCSTTS
T ss_pred EecCCCH
Confidence 9987554
No 444
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=33.77 E-value=1.5e+02 Score=23.36 Aligned_cols=58 Identities=14% Similarity=0.171 Sum_probs=41.4
Q ss_pred eE-EEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 56 TI-FFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 56 ~I-~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
+| .+.|.-+-..+++.....|..+|.+.. +=+.|.-+....+.+.++.++++|+++|.
T Consensus 23 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~d--------------------v~V~SaHR~p~~l~~~~~~a~~~g~~ViI 81 (182)
T 1u11_A 23 VVGIIMGSQSDWETMRHADALLTELEIPHE--------------------TLIVSAHRTPDRLADYARTAAERGLNVII 81 (182)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTCHHHHHHHHHHTTTTTCCEEE
T ss_pred EEEEEECcHHHHHHHHHHHHHHHHcCCCeE--------------------EEEEcccCCHHHHHHHHHHHHhCCCcEEE
Confidence 45 455555566999999999999998721 23456666777788888888888887543
No 445
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=33.76 E-value=1.2e+02 Score=26.21 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=64.9
Q ss_pred HHcCCCeEEEEeccch----HHHHHHHHHHHHhc-CCeeeecC----CccccccccCCCCCC-cEEEEEeCCCCcHHHHH
Q 019775 50 LLKCRGTIFFTGVGKS----GFVANKISQTLISL-GIKSGFLN----PLDALHGDIGILSSD-DILVMFSKSGNTEELLK 119 (336)
Q Consensus 50 i~~a~~~I~i~G~G~s----~~~a~~~~~~l~~~-g~~~~~~~----~~~~~~~~~~~~~~~-dlvi~iS~sG~~~~~~~ 119 (336)
|.+| +.|.--|.|.. ..+.+.|+..|..- |-.--.+. +.+.+.......-.. ++.|.+--||.-..
T Consensus 199 l~~A-~ivVsgGRG~~~~e~f~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~~lYiA~GISGAiQH--- 274 (320)
T 1o97_D 199 ITTV-DFIMSIGRGIGEETNVEQFRELADEAGATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQH--- 274 (320)
T ss_dssp CSCS-SEEEEECGGGCSGGGHHHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHH---
T ss_pred cCCC-CEEEEcCCccCChHHHHHHHHHHHHhCCceeecHHHHhCCCCChhhEeecCceEecccceEEEEeccCcHHH---
Confidence 4577 47777777743 46777788777532 21111111 344444555556667 99999999999876
Q ss_pred HHHHHHHcCCe-EEEEeCCCCCccccccCEEEEc
Q 019775 120 VVPCAKAKGAY-LVSVTSVEGNALAAVCDMNVHL 152 (336)
Q Consensus 120 ~~~~ak~~g~~-vi~IT~~~~s~l~~~ad~~i~~ 152 (336)
.+--++.+ ||+|=..++.|+.+.|||-|.-
T Consensus 275 ---laGm~~s~~IVAIN~D~~ApIF~~ADygiVg 305 (320)
T 1o97_D 275 ---MAGMKHVPTIIAVNTDPGASIFTIAKYGIVA 305 (320)
T ss_dssp ---HHHHTTCSEEEEECSCTTCGGGGTCSEEECS
T ss_pred ---HhhcccCCEEEEEeCCCCCCcccccCeEEee
Confidence 34446666 6788888999999999999864
No 446
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=33.63 E-value=59 Score=27.10 Aligned_cols=76 Identities=12% Similarity=-0.003 Sum_probs=44.6
Q ss_pred CeEEEEeccchH--HHHHHHHHHHHhcCCeeeecC---CccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCC
Q 019775 55 GTIFFTGVGKSG--FVANKISQTLISLGIKSGFLN---PLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGA 129 (336)
Q Consensus 55 ~~I~i~G~G~s~--~~a~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~ 129 (336)
.+|.+...+.-. .=...++..|...|..++.+. +.+.+.......+++-+.+-.+.......+.++++.+++.|.
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~ 203 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGI 203 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCC
Confidence 466555444332 556677777888899998765 233333222223333333333335555778888999999875
Q ss_pred e
Q 019775 130 Y 130 (336)
Q Consensus 130 ~ 130 (336)
.
T Consensus 204 ~ 204 (258)
T 2i2x_B 204 K 204 (258)
T ss_dssp C
T ss_pred C
Confidence 4
No 447
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=33.61 E-value=1.5e+02 Score=23.91 Aligned_cols=82 Identities=15% Similarity=0.063 Sum_probs=52.1
Q ss_pred eEEEEec------cchHHHHHHHHHHHHhcCCeeeecCC-ccc--c---------c-----------------cccCCC-
Q 019775 56 TIFFTGV------GKSGFVANKISQTLISLGIKSGFLNP-LDA--L---------H-----------------GDIGIL- 99 (336)
Q Consensus 56 ~I~i~G~------G~s~~~a~~~~~~l~~~g~~~~~~~~-~~~--~---------~-----------------~~~~~~- 99 (336)
+|.|+-. |....-.......|.+.|..+.++.. ... . . ..+..+
T Consensus 8 kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l~~~~ 87 (232)
T 1vhq_A 8 KIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQAD 87 (232)
T ss_dssp EEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGCC
T ss_pred eEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCcccccccccchhhhhhhhHHHHHhhhcCCCCHHHcC
Confidence 5666544 66655555566777777888776542 211 0 0 111122
Q ss_pred -CCCcEEEEEeCCCC----------------cHHHHHHHHHHHHcCCeEEEEeCC
Q 019775 100 -SSDDILVMFSKSGN----------------TEELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 100 -~~~dlvi~iS~sG~----------------~~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
.+-|++|+-...|. ++++.+.++.+.++|..+.+|+.-
T Consensus 88 ~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G 142 (232)
T 1vhq_A 88 AAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIA 142 (232)
T ss_dssp GGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTG
T ss_pred cccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHH
Confidence 23477777765432 678999999999999999999964
No 448
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=33.56 E-value=1.8e+02 Score=25.64 Aligned_cols=46 Identities=20% Similarity=0.261 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcc
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLD 90 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~ 90 (336)
++..++-+.+... +++.++|.|.+ +.+++..|.+.|..+.++....
T Consensus 134 ~d~~~l~~~l~~~-~~vvVIGgG~~---g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 134 DDALKIKDECKNK-GKAFIIGGGIL---GIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp HHHHHHHHHHHHH-SCEEEECCSHH---HHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHHHHHhhcC-CeEEEECCCHH---HHHHHHHHHhCCCeEEEEEcCC
Confidence 3444444445556 59999998875 5566677777899998876443
No 449
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=33.45 E-value=1.9e+02 Score=23.39 Aligned_cols=32 Identities=16% Similarity=-0.019 Sum_probs=18.9
Q ss_pred eEEEEec-cchH-HHHHHHHHHHHhcCCeeeecC
Q 019775 56 TIFFTGV-GKSG-FVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 56 ~I~i~G~-G~s~-~~a~~~~~~l~~~g~~~~~~~ 87 (336)
-++++|. |+.. ..+..+..++..-|.++.++.
T Consensus 14 i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~ 47 (223)
T 2b8t_A 14 IEFITGPMFAGKTAELIRRLHRLEYADVKYLVFK 47 (223)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEE
Confidence 4455566 5444 345555666766777776663
No 450
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=33.44 E-value=98 Score=23.09 Aligned_cols=84 Identities=8% Similarity=0.055 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcccc------ccccCCCCCCc--EEEEEeCC
Q 019775 40 LPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDAL------HGDIGILSSDD--ILVMFSKS 111 (336)
Q Consensus 40 ~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~------~~~~~~~~~~d--lvi~iS~s 111 (336)
.+.+..+++.+.+.+ .-++++|.+ +. .|...|+++..+.....- .+....+..+. ++|-+...
T Consensus 36 K~~l~~~a~~l~~lG--f~i~AT~GT---a~----~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~ 106 (143)
T 2yvq_A 36 RPRFLGVAEQLHNEG--FKLFATEAT---SD----WLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNN 106 (143)
T ss_dssp HHHHHHHHHHHHTTT--CEEEEEHHH---HH----HHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCC
T ss_pred hHHHHHHHHHHHHCC--CEEEECchH---HH----HHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCC
Confidence 455666777776664 334444433 22 233567777776643321 12222233443 33333322
Q ss_pred CC--cHHHHHHHHHHHHcCCeEE
Q 019775 112 GN--TEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 112 G~--~~~~~~~~~~ak~~g~~vi 132 (336)
+. ..+-..+-+.|-+.|++++
T Consensus 107 ~~~~~~d~~~iRR~Av~~~IP~~ 129 (143)
T 2yvq_A 107 NTKFVHDNYVIRRTAVDSGIPLL 129 (143)
T ss_dssp CGGGHHHHHHHHHHHHHTTCCEE
T ss_pred CCcCCccHHHHHHHHHHhCCCeE
Confidence 11 2345556667777777764
No 451
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=33.44 E-value=68 Score=27.23 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=51.5
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-+++.|+ |.+..+...=..++.+.-... . ..+-.+|+=..+..
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~--~-------------~gr~pviaGvg~~~ 80 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDV--V-------------NGRVQVIAGAGSNC 80 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH--H-------------TTSSEEEEECCCSS
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH--h-------------CCCCcEEEeCCCCC
Confidence 4678899999999887664 46777665 444433333233333221110 0 11222333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
+.+.++.++.|++.|+.-+++..
T Consensus 81 t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 81 TEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEECC
Confidence 79999999999999998776654
No 452
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=33.37 E-value=96 Score=28.34 Aligned_cols=76 Identities=8% Similarity=0.026 Sum_probs=53.0
Q ss_pred CeEEEE-eccchHHHHHHHHHHHHhcCCeeeecCCc-------------------cccccccCCCCCCcEEEEEeCCCCc
Q 019775 55 GTIFFT-GVGKSGFVANKISQTLISLGIKSGFLNPL-------------------DALHGDIGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 55 ~~I~i~-G~G~s~~~a~~~~~~l~~~g~~~~~~~~~-------------------~~~~~~~~~~~~~dlvi~iS~sG~~ 114 (336)
++|-++ |...+..-..++...|..+|+.+..+.+. ..-...+..+.+-.+-|+++.++
T Consensus 170 ~~VNii~G~~~~~~D~~eik~lL~~~Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~-- 247 (458)
T 3pdi_B 170 RQVNVLCSANLTPGDLEYIAESIESFGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSL-- 247 (458)
T ss_dssp SEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGG--
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHcCCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHH--
Confidence 589999 87556666789999999999999987532 11223344566667777775543
Q ss_pred HHHHHHHHHHHH-cCCeEEEEe
Q 019775 115 EELLKVVPCAKA-KGAYLVSVT 135 (336)
Q Consensus 115 ~~~~~~~~~ak~-~g~~vi~IT 135 (336)
..+++.+++ .|++.+.+.
T Consensus 248 ---~~~A~~Le~~~GiP~~~~~ 266 (458)
T 3pdi_B 248 ---AGAADALAERTGVPDRRFG 266 (458)
T ss_dssp ---HHHHHHHHHHSCCCEEEEC
T ss_pred ---HHHHHHHHHHHCCCEEecC
Confidence 467777766 588888663
No 453
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=33.02 E-value=31 Score=32.75 Aligned_cols=69 Identities=19% Similarity=0.330 Sum_probs=46.2
Q ss_pred cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 63 GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
|.-..+++.+ ..|..+|+..+.+.+.......-+ .+..|..-+=+.-|...+..++++.|+++|++||+
T Consensus 169 Gd~~gi~~~L-dyLk~LGvt~I~L~Pi~~~~~~~G-Yd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 237 (583)
T 1ea9_C 169 GDLQGVIDHL-DHLSKLGVNAVYFTPLFKATTNHK-YDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLL 237 (583)
T ss_dssp CCHHHHHHTH-HHHHHHTCSEEEECCCSSCSSSST-TSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEE
T ss_pred cCHHHHHHhh-HHHHHcCCCEEEECCCccCCCCCC-cCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4445677776 789999999998876443221111 11222211224567789999999999999999986
No 454
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=32.97 E-value=1.4e+02 Score=21.59 Aligned_cols=96 Identities=15% Similarity=0.040 Sum_probs=52.5
Q ss_pred eEEEEeccchHHHHHHHHHHHHh-cCCeee-ecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHc--CCeE
Q 019775 56 TIFFTGVGKSGFVANKISQTLIS-LGIKSG-FLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAK--GAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~-~g~~~~-~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~--g~~v 131 (336)
+|.++. ........+...|.. .|..+. ...+.......+... +-|++|+ ...-...+-.++++.+++. ++++
T Consensus 7 ~ILivd--d~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~-~~dlii~-D~~l~~~~g~~~~~~l~~~~~~~~i 82 (153)
T 3cz5_A 7 RIMLVD--DHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRET-TPDIVVM-DLTLPGPGGIEATRHIRQWDGAARI 82 (153)
T ss_dssp EEEEEC--SCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTT-CCSEEEE-CSCCSSSCHHHHHHHHHHHCTTCCE
T ss_pred EEEEEC--CcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcC-CCCEEEE-ecCCCCCCHHHHHHHHHHhCCCCeE
Confidence 566654 345566677777777 688776 555554443333322 2455444 3222222335566666654 6789
Q ss_pred EEEeCCCCCccc-----cccCEEEEcCCC
Q 019775 132 VSVTSVEGNALA-----AVCDMNVHLPVE 155 (336)
Q Consensus 132 i~IT~~~~s~l~-----~~ad~~i~~~~~ 155 (336)
|++|+....... .-++.++.-|..
T Consensus 83 i~ls~~~~~~~~~~~~~~g~~~~l~kp~~ 111 (153)
T 3cz5_A 83 LIFTMHQGSAFALKAFEAGASGYVTKSSD 111 (153)
T ss_dssp EEEESCCSHHHHHHHHHTTCSEEEETTSC
T ss_pred EEEECCCCHHHHHHHHHCCCcEEEecCCC
Confidence 999987654332 224555555443
No 455
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=32.95 E-value=33 Score=29.25 Aligned_cols=31 Identities=16% Similarity=0.140 Sum_probs=20.3
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEEeCCCCCc
Q 019775 111 SGNTEELLKVVPCAKAKGAYLVSVTSVEGNA 141 (336)
Q Consensus 111 sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~ 141 (336)
......+.++++.+|++|+++|..-......
T Consensus 220 eps~~~l~~l~~~ik~~~v~~If~e~~~~~~ 250 (291)
T 1pq4_A 220 EPSAQELKQLIDTAKENNLTMVFGETQFSTK 250 (291)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEETTSCCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCChH
Confidence 3445667777777777777777665554443
No 456
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=32.89 E-value=1.3e+02 Score=26.41 Aligned_cols=42 Identities=17% Similarity=0.092 Sum_probs=33.9
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 110 KSGNTEELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 110 ~sG~~~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
.+| ..-...++.+++.|.+++.+..+++++...++|..+.++
T Consensus 18 g~g--~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~ 59 (391)
T 1kjq_A 18 GSG--ELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVIN 59 (391)
T ss_dssp SCS--HHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECC
T ss_pred CCC--HHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECC
Confidence 445 345677889999999999999998888888888877664
No 457
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=32.89 E-value=67 Score=27.52 Aligned_cols=86 Identities=15% Similarity=0.115 Sum_probs=51.7
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-... . ..+-.+|+=..+..
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~--~-------------~grvpViaGvg~~~ 91 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEE--A-------------KGKIKLIAHVGCVS 91 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH--H-------------TTTSEEEEECCCSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHH--h-------------CCCCcEEEecCCCC
Confidence 3588899999999987664 46777775 444444333333333221110 0 01222333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
+.+.++.++.|++.|+.-+++..
T Consensus 92 t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 92 TAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCEEEecC
Confidence 79999999999999998776654
No 458
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=32.87 E-value=1.1e+02 Score=25.94 Aligned_cols=83 Identities=13% Similarity=0.009 Sum_probs=53.7
Q ss_pred hcCChhHHHHHHHHHHcCCCeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCc
Q 019775 36 QHLSLPHTLTFTQTLLKCRGTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~ 114 (336)
..+|.+.+++.++.+.++-+-|++.|+ |.+..+...=..++.+.-.. +-.+|+=..+..+
T Consensus 14 g~iD~~~l~~lv~~li~~v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-------------------rvpviaGvg~~~t 74 (283)
T 2pcq_A 14 GRLDEEAFRELAQALEPLVDGLLVYGSNGEGVHLTPEERARGLRALRP-------------------RKPFLVGLMEETL 74 (283)
T ss_dssp CCBCHHHHHHHHHHHGGGSSCCEETCTTTTGGGSCHHHHHHHHHTCCC-------------------SSCCEEEECCSSH
T ss_pred CCcCHHHHHHHHHHHHhhCCEEEECCcCcCchhcCHHHHHHHHHHHHh-------------------CCcEEEeCCCCCH
Confidence 357888899999886432246777776 55555544444444444222 1123333444578
Q ss_pred HHHHHHHHHHHHcCCeEEEEeCC
Q 019775 115 EELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
.+.++.++.|++.|+.-+.+...
T Consensus 75 ~~ai~la~~A~~~Gadavlv~~P 97 (283)
T 2pcq_A 75 PQAEGALLEAKAAGAMALLATPP 97 (283)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999999999997776643
No 459
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=32.83 E-value=1.2e+02 Score=20.71 Aligned_cols=80 Identities=10% Similarity=0.140 Sum_probs=43.6
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCee-eecCCccccccccCCCCCCcEEEE-EeCCCCcHHHHHHHHHHHH--cCCeE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKS-GFLNPLDALHGDIGILSSDDILVM-FSKSGNTEELLKVVPCAKA--KGAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~~~~~~~~~~ak~--~g~~v 131 (336)
+|.++. ........+...|...|..+ ....+........... +-|++|+ +..++ .+-.++++..++ .+.++
T Consensus 4 ~ilivd--d~~~~~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~-~~dlil~D~~l~~--~~g~~~~~~l~~~~~~~~i 78 (120)
T 1tmy_A 4 RVLIVD--DAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL-KPDIVTMDITMPE--MNGIDAIKEIMKIDPNAKI 78 (120)
T ss_dssp EEEEEC--SCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CCSEEEEECSCGG--GCHHHHHHHHHHHCTTCCE
T ss_pred eEEEEc--CcHHHHHHHHHHHhhcCcEEEEEECCHHHHHHHHHhc-CCCEEEEeCCCCC--CcHHHHHHHHHhhCCCCeE
Confidence 566664 34455666677777778884 3454444433222222 3355443 23333 223455555554 36889
Q ss_pred EEEeCCCCC
Q 019775 132 VSVTSVEGN 140 (336)
Q Consensus 132 i~IT~~~~s 140 (336)
|.+|+....
T Consensus 79 i~~s~~~~~ 87 (120)
T 1tmy_A 79 IVCSAMGQQ 87 (120)
T ss_dssp EEEECTTCH
T ss_pred EEEeCCCCH
Confidence 999987654
No 460
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=32.71 E-value=30 Score=26.06 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCCC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVEG 139 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~~ 139 (336)
.+.+.++++.++++|.+++..|+...
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~ 51 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREG 51 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 45789999999999999999999754
No 461
>4aay_A AROA; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=32.56 E-value=1.1e+02 Score=30.40 Aligned_cols=55 Identities=4% Similarity=0.191 Sum_probs=34.8
Q ss_pred cCCeEEEEeCCCCCccccccC--------EEEEcCCCcccCCCCCCChhHHHHHHHHHHHHHHHHHhhcCCChHHHhhcC
Q 019775 127 KGAYLVSVTSVEGNALAAVCD--------MNVHLPVERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLTRDEYAANH 198 (336)
Q Consensus 127 ~g~~vi~IT~~~~s~l~~~ad--------~~i~~~~~~~~~~~~~~~~~s~~~~~~l~d~l~~~~~~~~~~~~~~~~~~~ 198 (336)
+|+++|+|-.. .+..+..|| ..+.+.-+++ ..++..|+..++++...+ ++|.+.+
T Consensus 273 ~GaklIvIDPr-~t~ta~~Ad~~~~~~~~~~l~irPGTD---------------~AL~~a~~~~ii~egl~D-~~Fi~~~ 335 (845)
T 4aay_A 273 EAGRIIIVDPR-RTVTVNACEQTAGADNVLHLAINSGTD---------------LALFNALFTYIADKGWVD-RDFIDKS 335 (845)
T ss_dssp CCCEEEEECSS-CCHHHHHHHHHHCGGGEEEECCCTTCH---------------HHHHHHHHHHHHHHTCSC-HHHHHHH
T ss_pred CCCEEEEEeCC-CCHHHHHHHhhcccccceEEeecCCcH---------------HHHHHHHHHHHHHcCCcc-HHHHHHH
Confidence 69999999876 555556665 7777766656 556666666666654333 3444443
No 462
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=32.51 E-value=88 Score=28.61 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEE------------EEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILV------------MFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi------------~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..+++.+ ..|..+|+..+.+.+........ . ..=|..= +=+.-|...+..++++.|+++|++||+
T Consensus 21 ~gi~~~L-dyL~~LGvt~I~L~Pi~~~~~~~-~-~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~Vil 97 (483)
T 3bh4_A 21 KRLQNDA-EHLSDIGITAVWIPPAYKGLSQS-D-NGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYG 97 (483)
T ss_dssp HHHHHHH-HHHHHHTCCEEEECCCSEESSTT-S-CSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHH-HHHHhcCCCEEEcCccccCCCCC-C-CCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3566666 68899999999988754422100 0 0001100 114458889999999999999999884
No 463
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=32.43 E-value=29 Score=28.69 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCccccc
Q 019775 115 EELLKVVPCAKAKGAYLVSVTSVEGNALAAV 145 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ 145 (336)
+...++++.++++|.+++..|++...+...+
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~ 54 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESV 54 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHH
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence 6788999999999999999998876665444
No 464
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=32.41 E-value=1.4e+02 Score=26.39 Aligned_cols=35 Identities=11% Similarity=0.223 Sum_probs=26.6
Q ss_pred cCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcc
Q 019775 52 KCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLD 90 (336)
Q Consensus 52 ~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~ 90 (336)
.. ++|.++|.|.+ +.+++..|.+.|.++.++....
T Consensus 144 ~~-~~vvViGgG~~---g~E~A~~l~~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 144 PQ-SRLLIVGGGVI---GLELAATARTAGVHVSLVETQP 178 (408)
T ss_dssp TT-CEEEEECCSHH---HHHHHHHHHHTTCEEEEEESSS
T ss_pred cC-CeEEEECCCHH---HHHHHHHHHhCCCEEEEEEeCC
Confidence 45 59999998864 6667778888899988776443
No 465
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=32.41 E-value=32 Score=28.69 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHcCCCeEEEEeccchHHHHH
Q 019775 41 PHTLTFTQTLLKCRGTIFFTGVGKSGFVAN 70 (336)
Q Consensus 41 ~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~ 70 (336)
+++++++++|.++++-|++.|.|.|...+-
T Consensus 3 ~~i~~l~~~l~~a~~ivv~tGAGiS~~SGI 32 (253)
T 1ma3_A 3 DEIRKAAEILAKSKHAVVFTGAGISAESGI 32 (253)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGSCC---
T ss_pred HHHHHHHHHHHhCCcEEEEEchhhhHhhCC
Confidence 568889999988866677889998875554
No 466
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=32.26 E-value=90 Score=28.56 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEE------------EEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILV------------MFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi------------~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..+++.+ ..|..+|+..+.+.+....... .. ..=|..= +=+.-|...+..++++.|+++|++||+
T Consensus 25 ~gi~~~L-dyL~~LGvt~IwL~Pi~~~~~~-~~-~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~Vil 101 (485)
T 1wpc_A 25 NRLNSDA-SNLKSKGITAVWIPPAWKGASQ-ND-VGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYG 101 (485)
T ss_dssp HHHHHHH-HHHHHHTCCEEEECCCSEESST-TC-CSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHH-HHHHHcCCCEEEeCCcccCCCC-CC-CCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3566666 6889999999998875542210 00 0001110 113468889999999999999999884
No 467
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=32.24 E-value=1.2e+02 Score=28.39 Aligned_cols=26 Identities=31% Similarity=0.535 Sum_probs=22.7
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcC
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLG 80 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g 80 (336)
.||.++|.|++. .+|+.+...|.+.|
T Consensus 285 ~riv~~GAGaAgigia~ll~~~m~~~G 311 (564)
T 1pj3_A 285 HKILFLGAGEAALGIANLIVMSMVENG 311 (564)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 589999999987 78888888888888
No 468
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=32.22 E-value=1.4e+02 Score=27.01 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=26.5
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCcc
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLD 90 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~ 90 (336)
+++.++|.|. ++.+++..|.+.|..+.++....
T Consensus 184 ~~vvViGgG~---~g~e~A~~l~~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGI---IGLEMGSVYSRLGSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCH---HHHHHHHHHHHcCCEEEEEEeCC
Confidence 5999999885 46677888888999998886543
No 469
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=32.22 E-value=20 Score=30.63 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=16.8
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCCCCc
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVEGNA 141 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~~s~ 141 (336)
...+.++++.+|++++++|..-......
T Consensus 214 ~~~l~~l~~~ik~~~v~~if~e~~~~~~ 241 (286)
T 3gi1_A 214 PRQLKEIQDFVKEYNVKTIFAEDNVNPK 241 (286)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSCTH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCChH
Confidence 4556666666666666666665554443
No 470
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=32.15 E-value=89 Score=28.53 Aligned_cols=65 Identities=12% Similarity=0.121 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEE------------EEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILV------------MFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi------------~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..+++.+ ..|..+|+..+.+.+........ . ..=|..= +=+.-|...+..++++.|+++|++||+
T Consensus 23 ~gi~~~L-dyL~~LGvt~I~l~Pi~~~~~~~-~-~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~Vil 99 (480)
T 1ud2_A 23 NRLHDDA-AALSDAGITAIWIPPAYKGNSQA-D-VGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYG 99 (480)
T ss_dssp HHHHHHH-HHHHHHTCCEEEECCCSEESSTT-C-CSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHH-HHHHHcCCCEEEeCCcccCCCCC-C-CCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3566666 68899999999888755422100 0 0001100 113468889999999999999999884
No 471
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=32.14 E-value=61 Score=20.13 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=25.8
Q ss_pred CCCcHHHHHHHHHhcCcceEEEEcCCCcEEEEee
Q 019775 226 EGDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFT 259 (336)
Q Consensus 226 ~~~~v~~~~~~~~~~~~~~ipVvd~~~~~~G~it 259 (336)
+-+|++||+..|.-.+++.+...|.+..=+.+|.
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVvY 44 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVY 44 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEEE
Confidence 4578999999999999999998886533334443
No 472
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=32.09 E-value=64 Score=25.16 Aligned_cols=44 Identities=7% Similarity=0.057 Sum_probs=30.3
Q ss_pred HHHHH-HHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeec
Q 019775 42 HTLTF-TQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFL 86 (336)
Q Consensus 42 ~i~~~-~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~ 86 (336)
.++++ +++|.+|++-+++.|..........+...-.+ |.++...
T Consensus 23 ~i~~a~a~lI~~AkRPvIl~Ggv~~~~A~~eL~~~ae~-~iPVvtT 67 (174)
T 1ytl_A 23 EKGKPVANMIKKAKRPLLIVGPDMTDEMFERVKKFVEK-DITVVAT 67 (174)
T ss_dssp CCHHHHHHHHHHCSSEEEEECSCCCHHHHHHHHHHHTS-SSEEEEE
T ss_pred cHHHHHHHHHHcCCCCEEEECCCCCccHHHHHHHHHHc-CCCEEEc
Confidence 37888 99999997667777762223555666555556 9998754
No 473
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=32.00 E-value=1.3e+02 Score=26.24 Aligned_cols=38 Identities=16% Similarity=0.107 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccccCEEEEcC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSVEGNALAAVCDMNVHLP 153 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~i~~~ 153 (336)
.-..+++.+++.|.+++.+..+..++...++|..+..+
T Consensus 12 ~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~ 49 (380)
T 3ax6_A 12 LGKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAG 49 (380)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECC
Confidence 34566778999999999999888888778888766554
No 474
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=31.99 E-value=2.3e+02 Score=23.84 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=52.3
Q ss_pred eEEEEeccch---HHHHHHHHHHHHhcC-CeeeecCCcc---ccccccCCCCCCcEEEEEeCCCC--cHHHHHHHHHHHH
Q 019775 56 TIFFTGVGKS---GFVANKISQTLISLG-IKSGFLNPLD---ALHGDIGILSSDDILVMFSKSGN--TEELLKVVPCAKA 126 (336)
Q Consensus 56 ~I~i~G~G~s---~~~a~~~~~~l~~~g-~~~~~~~~~~---~~~~~~~~~~~~dlvi~iS~sG~--~~~~~~~~~~ak~ 126 (336)
+|.+++.+.. ...+..+...|...| +.|....+.. ........+.+=|++| +..+|. +.+..+.++..=+
T Consensus 6 kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV-~~~~~~~l~~~~~~~l~~yV~ 84 (281)
T 4e5v_A 6 KTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVV-LDYNGDSWPEETNRRFLEYVQ 84 (281)
T ss_dssp EEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEE-ECCCSSCCCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEE-EeCCCCcCCHHHHHHHHHHHH
Confidence 6777755332 255567777777777 7887765421 1111123577889988 566655 4677777777777
Q ss_pred cCCeEEEEeCC
Q 019775 127 KGAYLVSVTSV 137 (336)
Q Consensus 127 ~g~~vi~IT~~ 137 (336)
.|.-+|.+=+.
T Consensus 85 ~Ggglv~~H~a 95 (281)
T 4e5v_A 85 NGGGVVIYHAA 95 (281)
T ss_dssp TTCEEEEEGGG
T ss_pred cCCCEEEEecc
Confidence 89999988763
No 475
>3uj3_X DNA-invertase; helix-turn-helix, site-specific recombinase, recombination; 3.51A {Enterobacteria phage MU} PDB: 3plo_X
Probab=31.89 E-value=20 Score=28.38 Aligned_cols=41 Identities=22% Similarity=0.314 Sum_probs=31.3
Q ss_pred cCCCCCCcEEEEEeCCCCc---HHHHHHHHHHHHcCCeEEEEeC
Q 019775 96 IGILSSDDILVMFSKSGNT---EELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 96 ~~~~~~~dlvi~iS~sG~~---~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
+..+.++|++++-+.++-. .++...++.++++|+.+++++.
T Consensus 49 l~~~~~gd~lvv~~ldRL~R~~~~~~~~~~~l~~~gv~l~~~~~ 92 (193)
T 3uj3_X 49 LKRLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTD 92 (193)
T ss_dssp HHTCCTTCCEEESCSTTTTCCHHHHHHHHHHHHTTTCCCEETTT
T ss_pred HHHccCCCEEEEEECccccCChHHHHHHHHHHHHcCcEEEEcCC
Confidence 3456677999988876554 5667777889999999998765
No 476
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=31.88 E-value=62 Score=23.23 Aligned_cols=83 Identities=12% Similarity=0.004 Sum_probs=49.2
Q ss_pred CeEEEEeccchHHHHHHHHHHHHhcCC--eeeecCCccccccccCCC---------CCCcEEEEE-eCCCCcHHHHHHHH
Q 019775 55 GTIFFTGVGKSGFVANKISQTLISLGI--KSGFLNPLDALHGDIGIL---------SSDDILVMF-SKSGNTEELLKVVP 122 (336)
Q Consensus 55 ~~I~i~G~G~s~~~a~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~---------~~~dlvi~i-S~sG~~~~~~~~~~ 122 (336)
.+|.++. ........+...|...|. .+....+.......+... .+-|++|+= ..++ .+-.++++
T Consensus 7 ~~iLivd--d~~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~--~~g~~~~~ 82 (149)
T 1k66_A 7 QPLLVVE--DSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPG--TDGREVLQ 82 (149)
T ss_dssp SCEEEEC--CCHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSS--SCHHHHHH
T ss_pred ccEEEEE--CCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCC--CCHHHHHH
Confidence 3676665 445566777788888887 677666655544333321 234555442 2333 23356666
Q ss_pred HHHH----cCCeEEEEeCCCCCc
Q 019775 123 CAKA----KGAYLVSVTSVEGNA 141 (336)
Q Consensus 123 ~ak~----~g~~vi~IT~~~~s~ 141 (336)
..++ .++++|++|+.....
T Consensus 83 ~l~~~~~~~~~~ii~~t~~~~~~ 105 (149)
T 1k66_A 83 EIKQDEVLKKIPVVIMTTSSNPK 105 (149)
T ss_dssp HHTTSTTGGGSCEEEEESCCCHH
T ss_pred HHHhCcccCCCeEEEEeCCCCHH
Confidence 6665 458999999876543
No 477
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=31.84 E-value=1.8e+02 Score=25.96 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=25.9
Q ss_pred cCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc
Q 019775 52 KCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL 89 (336)
Q Consensus 52 ~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~ 89 (336)
.. +++.++|.|.+ +.+++..|.+.|..+.++...
T Consensus 148 ~~-~~vvIiG~G~~---g~e~A~~l~~~g~~Vtlv~~~ 181 (447)
T 1nhp_A 148 EV-NNVVVIGSGYI---GIEAAEAFAKAGKKVTVIDIL 181 (447)
T ss_dssp TC-CEEEEECCSHH---HHHHHHHHHHTTCEEEEEESS
T ss_pred CC-CeEEEECCCHH---HHHHHHHHHHCCCeEEEEecC
Confidence 45 59999999864 556677788889999887643
No 478
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=31.84 E-value=81 Score=26.95 Aligned_cols=86 Identities=15% Similarity=0.168 Sum_probs=51.5
Q ss_pred hcCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC
Q 019775 36 QHLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN 113 (336)
Q Consensus 36 ~~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~ 113 (336)
..+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-... . ..+-.+|+=..+-.
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~--~-------------~grvpViaGvg~~~ 92 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSV--V-------------DKRVPVIAGTGSNN 92 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH--H-------------TTSSCEEEECCCSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH--h-------------CCCceEEeCCCCCC
Confidence 3588899999999987664 46777765 444433333233333221110 0 01122333333446
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTS 136 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~ 136 (336)
+.+.++.++.|++.|+.-+++..
T Consensus 93 t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 93 THASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999998666654
No 479
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=31.83 E-value=68 Score=27.03 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=18.8
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLN 87 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~ 87 (336)
+|.|+|.|. ++..++..|.+.|.++..+.
T Consensus 5 ~i~iiG~G~---~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 5 KIAIAGAGA---MGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp EEEEECCSH---HHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEECcCH---HHHHHHHHHHhCCCcEEEEE
Confidence 688888774 34445555666677776654
No 480
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=31.76 E-value=68 Score=21.94 Aligned_cols=81 Identities=9% Similarity=0.050 Sum_probs=43.7
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEE-EeCCCCc-HHHHHHHHHHHHcCCeEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVM-FSKSGNT-EELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~-iS~sG~~-~~~~~~~~~ak~~g~~vi~ 133 (336)
+|.++.- .......+...|...|..+....+........... +-|++|+ +..++.+ .+.++.++. ..++++|.
T Consensus 3 ~ilivdd--~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~--~~~~~ii~ 77 (120)
T 2a9o_A 3 KILIVDD--EKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAE-QPDIIILDLMLPEIDGLEVAKTIRK--TSSVPILM 77 (120)
T ss_dssp EEEEECS--CHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH-CCSEEEECSSCSSSCHHHHHHHHHH--HCCCCEEE
T ss_pred eEEEEcC--CHHHHHHHHHHHHhcCcEEEEecCHHHHHHHHHhC-CCCEEEEeccCCCCCHHHHHHHHHh--CCCCCEEE
Confidence 5555543 34455666667777788877666544433222222 3355443 2333322 334444443 36789999
Q ss_pred EeCCCCCc
Q 019775 134 VTSVEGNA 141 (336)
Q Consensus 134 IT~~~~s~ 141 (336)
+|+.....
T Consensus 78 ~s~~~~~~ 85 (120)
T 2a9o_A 78 LSAKDSEF 85 (120)
T ss_dssp EESCCSHH
T ss_pred EecCCchH
Confidence 99876543
No 481
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=31.68 E-value=28 Score=24.96 Aligned_cols=81 Identities=15% Similarity=-0.002 Sum_probs=46.6
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCC-----cHHHHHHHHHHHH--cC
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGN-----TEELLKVVPCAKA--KG 128 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~-----~~~~~~~~~~ak~--~g 128 (336)
+|.++. ........+...|...|..+....+.......+... +-|++|+ ...-. ..+-.++++.+++ .+
T Consensus 5 ~ilivd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-~~dlvi~-d~~~~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 5 TIIIVD--DNKGVLTAVQLLLKNHFSKVITLSSPVSLSTVLREE-NPEVVLL-DMNFTSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp EEEEEC--SCHHHHHHHHHHHTTTSSEEEEECCHHHHHHHHHHS-CEEEEEE-ETTTTC-----CCHHHHHHHHHHHCTT
T ss_pred eEEEEe--CCHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHHcC-CCCEEEE-eCCcCCCCCCCccHHHHHHHHHhhCcC
Confidence 666665 344566677777888898888776655543333222 2354444 33211 2233455555555 46
Q ss_pred CeEEEEeCCCCC
Q 019775 129 AYLVSVTSVEGN 140 (336)
Q Consensus 129 ~~vi~IT~~~~s 140 (336)
+++|++|+....
T Consensus 81 ~~ii~ls~~~~~ 92 (140)
T 2qr3_A 81 LPVVLFTAYADI 92 (140)
T ss_dssp CCEEEEEEGGGH
T ss_pred CCEEEEECCCCH
Confidence 899999987553
No 482
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=31.57 E-value=50 Score=31.83 Aligned_cols=67 Identities=22% Similarity=0.252 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCcccccc--ccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHG--DIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..+...+ ..|..+|+..+.+.+...... .-.-...-|..-+=+.-|...+..++++.|+++|++||+
T Consensus 111 ~gl~~~L-dyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~ 179 (655)
T 3ucq_A 111 KGVEERL-DYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVL 179 (655)
T ss_dssp HHHHTTH-HHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhh-HHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3455554 588899999999887554321 111233445555667889999999999999999999884
No 483
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=31.54 E-value=1.1e+02 Score=25.84 Aligned_cols=78 Identities=9% Similarity=0.112 Sum_probs=52.1
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeee-ecCCccccccccCCCCCCcEEEE-EeCC-C-CcHHHHHHHHHHHHcCCeE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSG-FLNPLDALHGDIGILSSDDILVM-FSKS-G-NTEELLKVVPCAKAKGAYL 131 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~~~dlvi~-iS~s-G-~~~~~~~~~~~ak~~g~~v 131 (336)
+|.++ .-+......+...|...|..+. ...++......+.... -|++|. +.-+ | ..-++.+.++... +++|
T Consensus 162 rILvV--dD~~~~~~~l~~~L~~~g~~v~~~a~~g~eAl~~~~~~~-~dlvl~D~~MPd~mdG~e~~~~ir~~~--~~pi 236 (286)
T 3n0r_A 162 EVLII--EDEPVIAADIEALVRELGHDVTDIAATRGEALEAVTRRT-PGLVLADIQLADGSSGIDAVKDILGRM--DVPV 236 (286)
T ss_dssp EEEEE--CCSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHCC-CSEEEEESCCTTSCCTTTTTHHHHHHT--TCCE
T ss_pred cEEEE--cCCHHHHHHHHHHhhccCceEEEEeCCHHHHHHHHHhCC-CCEEEEcCCCCCCCCHHHHHHHHHhcC--CCCE
Confidence 55554 5677888888899999999998 7777665444443333 455443 3445 4 3355666666555 8999
Q ss_pred EEEeCCC
Q 019775 132 VSVTSVE 138 (336)
Q Consensus 132 i~IT~~~ 138 (336)
|.+|+..
T Consensus 237 I~lT~~~ 243 (286)
T 3n0r_A 237 IFITAFP 243 (286)
T ss_dssp EEEESCG
T ss_pred EEEeCCH
Confidence 9999974
No 484
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=31.42 E-value=51 Score=24.31 Aligned_cols=51 Identities=22% Similarity=0.130 Sum_probs=0.0
Q ss_pred EEEEEeCCCCcHHHHHH-HHHHHHcCCeE--EEEeCCCCCcccc-ccCEEEEcCC
Q 019775 104 ILVMFSKSGNTEELLKV-VPCAKAKGAYL--VSVTSVEGNALAA-VCDMNVHLPV 154 (336)
Q Consensus 104 lvi~iS~sG~~~~~~~~-~~~ak~~g~~v--i~IT~~~~s~l~~-~ad~~i~~~~ 154 (336)
+++..|.+|+|+.+.+. ++.+++.|..+ +-+.......+.+ +--+.|.+|+
T Consensus 4 ~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~l~~~~d~ii~~~p~ 58 (147)
T 1f4p_A 4 LIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCST 58 (147)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGCCSTTTTTTCSEEEEEECE
T ss_pred EEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhCCHHHhcCcCCEEEEEeCC
No 485
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=31.42 E-value=53 Score=23.74 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=23.9
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEeCCCCC
Q 019775 113 NTEELLKVVPCAKAKGAYLVSVTSVEGN 140 (336)
Q Consensus 113 ~~~~~~~~~~~ak~~g~~vi~IT~~~~s 140 (336)
-.+...++++.++++|.+++..|++...
T Consensus 25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 25 PRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 3577899999999999999999988643
No 486
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=31.40 E-value=1.3e+02 Score=23.28 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=43.3
Q ss_pred eEEEEeccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEEE
Q 019775 56 TIFFTGVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVSV 134 (336)
Q Consensus 56 ~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~I 134 (336)
-..+.|.-+-..+++.....|..+|.+.. +=+.|.-+....+.+.++.++++|+++|..
T Consensus 14 V~IimGS~SD~~v~~~a~~~L~~~Gi~~d--------------------v~V~SaHR~p~~l~~~~~~a~~~g~~ViIa 72 (170)
T 1xmp_A 14 VGVIMGSTSDWETMKYACDILDELNIPYE--------------------KKVVSAHRTPDYMFEYAETARERGLKVIIA 72 (170)
T ss_dssp EEEEESSGGGHHHHHHHHHHHHHTTCCEE--------------------EEECCTTTSHHHHHHHHHHTTTTTCCEEEE
T ss_pred EEEEECcHHHHHHHHHHHHHHHHcCCCEE--------------------EEEEeccCCHHHHHHHHHHHHhCCCcEEEE
Confidence 44555655666999999999999998721 234566777788888888888888885433
No 487
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=31.40 E-value=72 Score=22.10 Aligned_cols=38 Identities=24% Similarity=0.319 Sum_probs=25.2
Q ss_pred HHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCe-eeecCC
Q 019775 48 QTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIK-SGFLNP 88 (336)
Q Consensus 48 ~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~-~~~~~~ 88 (336)
..+.+. +.|+++..+... +..++..|...|+. +..+.+
T Consensus 47 ~~l~~~-~~ivvyc~~g~r--s~~a~~~L~~~G~~~v~~l~G 85 (106)
T 3hix_A 47 SSLEKS-RDIYVYGAGDEQ--TSQAVNLLRSAGFEHVSELKG 85 (106)
T ss_dssp HHSCTT-SCEEEECSSHHH--HHHHHHHHHHTTCSCEEECTT
T ss_pred hcCCCC-CeEEEEECCCCh--HHHHHHHHHHcCCcCEEEecC
Confidence 344555 578888654333 66677888889984 776654
No 488
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=31.39 E-value=69 Score=30.71 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=48.7
Q ss_pred eccchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 61 GVGKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 61 G~G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
+.|.=..+.+.+ ..|..+|++++.+.+.......-+ ....|..=+=+.-|...+..++++.|+++|++||+
T Consensus 234 ~gGdl~Gi~~kL-dYLk~LGvt~I~L~Pif~s~~~~G-Yd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIl 304 (645)
T 4aef_A 234 WGGDLIGIKEKI-DHLVNLGINAIYLTPIFSSLTYHG-YDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVIL 304 (645)
T ss_dssp CCCCHHHHHHTH-HHHHHHTCCEEEECCCEEESSTTC-SSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCHHHHHHhh-HHHHHcCCCEEEECCCCCCCCCCC-cCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEE
Confidence 335555666666 678999999999887644322111 22233333445668889999999999999999884
No 489
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=31.12 E-value=42 Score=26.06 Aligned_cols=27 Identities=7% Similarity=-0.018 Sum_probs=23.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEeCCCC
Q 019775 113 NTEELLKVVPCAKAKGAYLVSVTSVEG 139 (336)
Q Consensus 113 ~~~~~~~~~~~ak~~g~~vi~IT~~~~ 139 (336)
-.+.+.++++.++++|.++.++|++..
T Consensus 35 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~ 61 (189)
T 3ib6_A 35 LRKNAKETLEKVKQLGFKQAILSNTAT 61 (189)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCSS
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 347789999999999999999998865
No 490
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=31.07 E-value=87 Score=26.84 Aligned_cols=86 Identities=13% Similarity=0.173 Sum_probs=52.9
Q ss_pred cCChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCc
Q 019775 37 HLSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNT 114 (336)
Q Consensus 37 ~~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~ 114 (336)
.+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-... ...+--+|+=..+..+
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~---------------~~grvpviaGvg~~~t 96 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEA---------------VGDRARVIAGAGTYDT 96 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH---------------HTTTSEEEEECCCSCH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHH---------------hCCCCeEEEeCCCCCH
Confidence 688899999999987664 46777766 444443333233333221100 0112233333445568
Q ss_pred HHHHHHHHHHHHcCCeEEEEeCC
Q 019775 115 EELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 115 ~~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
.+.++.++.|++.|+.-+++...
T Consensus 97 ~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 97 AHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEECCC
Confidence 99999999999999987766653
No 491
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=30.98 E-value=2.2e+02 Score=25.04 Aligned_cols=44 Identities=11% Similarity=0.143 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCeeeecCCc
Q 019775 42 HTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIKSGFLNPL 89 (336)
Q Consensus 42 ~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~~~~~~~~ 89 (336)
+...+-..+... +++.++|.|.+ +.+++..+.+.|..+..+...
T Consensus 131 d~~~l~~~~~~~-~~vvViGgG~~---g~e~A~~l~~~g~~Vtvv~~~ 174 (404)
T 3fg2_P 131 ESEVLRQRMPDK-KHVVVIGAGFI---GLEFAATARAKGLEVDVVELA 174 (404)
T ss_dssp HHHHHHHHGGGC-SEEEEECCSHH---HHHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHhhcC-CeEEEECCCHH---HHHHHHHHHhCCCEEEEEeCC
Confidence 334444444566 59999999864 456677778889988877644
No 492
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=30.89 E-value=71 Score=22.12 Aligned_cols=47 Identities=9% Similarity=-0.043 Sum_probs=27.9
Q ss_pred ChhHHHHHHHHHHcCCCeEEEEeccchHHHHHHHHHHHHhcCCe-eeecCC
Q 019775 39 SLPHTLTFTQTLLKCRGTIFFTGVGKSGFVANKISQTLISLGIK-SGFLNP 88 (336)
Q Consensus 39 ~~~~i~~~~~~i~~a~~~I~i~G~G~s~~~a~~~~~~l~~~g~~-~~~~~~ 88 (336)
+...+......+.+. +.|+++..+.. -+..++..|...|+. +..+.+
T Consensus 44 p~~~l~~~~~~l~~~-~~ivvyc~~g~--rs~~a~~~L~~~G~~~v~~l~G 91 (108)
T 1gmx_A 44 TNDTLGAFMRDNDFD-TPVMVMCYHGN--SSKGAAQYLLQQGYDVVYSIDG 91 (108)
T ss_dssp CHHHHHHHHHHSCTT-SCEEEECSSSS--HHHHHHHHHHHHTCSSEEEETT
T ss_pred CHHHHHHHHHhcCCC-CCEEEEcCCCc--hHHHHHHHHHHcCCceEEEecC
Confidence 334455555555555 47888865433 245556677778874 766654
No 493
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=30.75 E-value=89 Score=26.52 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=50.5
Q ss_pred CChhHHHHHHHHHHcCC-CeEEEEec-cchHHHHHHHHHHHHhcCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcH
Q 019775 38 LSLPHTLTFTQTLLKCR-GTIFFTGV-GKSGFVANKISQTLISLGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTE 115 (336)
Q Consensus 38 ~~~~~i~~~~~~i~~a~-~~I~i~G~-G~s~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~ 115 (336)
+|.+.+++.++.+.+++ +-|++.|+ |.+..+...=..++.+.-... . ..+--+|+=..+-.+.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~--~-------------~gr~pvi~Gvg~~~t~ 83 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDK--V-------------NKRIPVIAGTGSNNTA 83 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHH--H-------------TTSSCEEEECCCSSHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH--h-------------CCCCcEEEeCCcccHH
Confidence 78889999999887664 46777665 444433333233333221110 0 0111233333344679
Q ss_pred HHHHHHHHHHHcCCeEEEEeCC
Q 019775 116 ELLKVVPCAKAKGAYLVSVTSV 137 (336)
Q Consensus 116 ~~~~~~~~ak~~g~~vi~IT~~ 137 (336)
+.++.++.|++.|+.-+++...
T Consensus 84 ~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 84 ASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEcCC
Confidence 9999999999999997766543
No 494
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=30.64 E-value=1.5e+02 Score=25.50 Aligned_cols=29 Identities=14% Similarity=0.183 Sum_probs=21.4
Q ss_pred EEEEEeCCCCcHHHHHHHHHHHHcCCeEE
Q 019775 104 ILVMFSKSGNTEELLKVVPCAKAKGAYLV 132 (336)
Q Consensus 104 lvi~iS~sG~~~~~~~~~~~ak~~g~~vi 132 (336)
+++.-...|...++.++.+.|+++|+.+|
T Consensus 126 ~v~~~~~~G~~~~~~~i~~la~~~~~~li 154 (367)
T 3nyt_A 126 AIIPVSLYGQCADFDAINAIASKYGIPVI 154 (367)
T ss_dssp EECCBCGGGCCCCHHHHHHHHHHTTCCBE
T ss_pred EEEeeCCccChhhHHHHHHHHHHcCCEEE
Confidence 34433446777788899999999998765
No 495
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=30.58 E-value=1.1e+02 Score=29.17 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=50.9
Q ss_pred cchHHHHHHHHHHHHh-cCCeeeecCCccccccccCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcC--C--eEEE
Q 019775 63 GKSGFVANKISQTLIS-LGIKSGFLNPLDALHGDIGILSSDDILVMFSKSGNTEELLKVVPCAKAKG--A--YLVS 133 (336)
Q Consensus 63 G~s~~~a~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g--~--~vi~ 133 (336)
|.=..+++.+ ..|.. +|+..+.+.+........ -.+..|..=+=+.-|...+..++++.|+++| + +||+
T Consensus 188 G~~~gi~~~L-dyLk~~LGvt~I~L~Pi~~~~~~~-GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIl 261 (637)
T 1ji1_A 188 GDLAGIDQKL-GYIKKTLGANILYLNPIFKAPTNH-KYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLIL 261 (637)
T ss_dssp CCHHHHHHTH-HHHHTTTCCCEEEESCCEECSSSS-CCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEE
T ss_pred cCHHHHHHhH-HHHHhccCCCEEEECCCccCCCCC-CcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEE
Confidence 5555777777 78999 999999988765543321 2334455444466688899999999999999 9 9874
No 496
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=30.57 E-value=47 Score=24.84 Aligned_cols=29 Identities=10% Similarity=-0.014 Sum_probs=23.8
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCCCCcc
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVEGNAL 142 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~~s~l 142 (336)
.+...++++.++++|.+++.+|++....+
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~ 66 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPL 66 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHH
Confidence 35678899999999999999998865544
No 497
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=30.43 E-value=1.2e+02 Score=28.71 Aligned_cols=27 Identities=26% Similarity=0.413 Sum_probs=23.0
Q ss_pred CeEEEEeccchH-HHHHHHHHHHHhcCC
Q 019775 55 GTIFFTGVGKSG-FVANKISQTLISLGI 81 (336)
Q Consensus 55 ~~I~i~G~G~s~-~~a~~~~~~l~~~g~ 81 (336)
.||.++|.|++. .+|+.+...|.+.|.
T Consensus 321 ~riv~~GAGaAgigia~ll~~~m~~~Gl 348 (605)
T 1o0s_A 321 EKYLFFGAGAASTGIAEMIVHQMQNEGI 348 (605)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHHHTTTC
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHcCC
Confidence 589999999987 788888888887774
No 498
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=30.42 E-value=68 Score=28.52 Aligned_cols=79 Identities=10% Similarity=0.028 Sum_probs=46.5
Q ss_pred EEEEec--cchHHHHHHHHHHHHhcCCeeeecCCccc-cccccCCCCCCcEEEEEeC---CCCcHHHHHHHHHHHH----
Q 019775 57 IFFTGV--GKSGFVANKISQTLISLGIKSGFLNPLDA-LHGDIGILSSDDILVMFSK---SGNTEELLKVVPCAKA---- 126 (336)
Q Consensus 57 I~i~G~--G~s~~~a~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~dlvi~iS~---sG~~~~~~~~~~~ak~---- 126 (336)
+.++|+ |.+..+|+.++..+...|..+..++-.+. .......+.+-|.+|+.|- .+.++.+...++.+..
T Consensus 260 ~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~l~~~D~iiigsP~y~~~~~~~~k~fld~l~~~~~~ 339 (414)
T 2q9u_A 260 TVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSSDITKVALHTYDSGAVAFASPTLNNTMMPSVAAALNYVRGLTLI 339 (414)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGCCHHHHHHHHHTCSEEEEECCCBTTBCCHHHHHHHHHHHHHTTT
T ss_pred EEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcCCHHHHHHHHHhCCEEEEEcCccCcCchHHHHHHHHHHHhhccc
Confidence 445554 67889999999999988877655532111 1111113445566666643 3445677777877664
Q ss_pred cCCeEEEEe
Q 019775 127 KGAYLVSVT 135 (336)
Q Consensus 127 ~g~~vi~IT 135 (336)
+|-++.+++
T Consensus 340 ~~K~~~~~~ 348 (414)
T 2q9u_A 340 KGKPAFAFG 348 (414)
T ss_dssp TTSBEEEEE
T ss_pred CCCEEEEEE
Confidence 344555554
No 499
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=30.38 E-value=1e+02 Score=30.24 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhcCCeeeecCCccccccc-cCCCCCCcEEEEEeCCCCcHHHHHHHHHHHHcCCeEEE
Q 019775 66 GFVANKISQTLISLGIKSGFLNPLDALHGD-IGILSSDDILVMFSKSGNTEELLKVVPCAKAKGAYLVS 133 (336)
Q Consensus 66 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~~~dlvi~iS~sG~~~~~~~~~~~ak~~g~~vi~ 133 (336)
..++...-..|..+|+..+.+.+....... .--....|..-+=+.-|...+..++++.|+++|++||+
T Consensus 201 ~~l~~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~Vil 269 (755)
T 3aml_A 201 REFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLM 269 (755)
T ss_dssp HHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 355555567889999999988765443211 11234455555556678889999999999999999884
No 500
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=30.37 E-value=34 Score=26.11 Aligned_cols=25 Identities=12% Similarity=0.007 Sum_probs=22.2
Q ss_pred cHHHHHHHHHHHHcCCeEEEEeCCC
Q 019775 114 TEELLKVVPCAKAKGAYLVSVTSVE 138 (336)
Q Consensus 114 ~~~~~~~~~~ak~~g~~vi~IT~~~ 138 (336)
.+.+.++++.++++|.++..+|+..
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCC
Confidence 4678899999999999999999875
Done!