Query 019776
Match_columns 336
No_of_seqs 202 out of 423
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 04:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019776.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019776hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2576 Glucosyltransferase - 100.0 1E-115 3E-120 854.0 24.4 311 5-317 1-322 (500)
2 PF03155 Alg6_Alg8: ALG6, ALG8 100.0 4E-102 9E-107 782.7 22.9 261 16-278 2-283 (469)
3 KOG2575 Glucosyltransferase - 100.0 1.3E-85 2.8E-90 644.2 22.1 263 13-276 36-316 (510)
4 TIGR03459 crt_membr carotene b 99.0 4.9E-09 1.1E-13 107.0 15.8 167 21-204 88-269 (470)
5 PF09594 DUF2029: Protein of u 98.4 5E-06 1.1E-10 75.0 12.0 154 63-251 3-162 (241)
6 COG5542 Predicted integral mem 98.4 1.8E-06 3.9E-11 87.0 9.8 182 28-237 62-248 (420)
7 PF13231 PMT_2: Dolichyl-phosp 98.2 7.9E-05 1.7E-09 62.7 13.9 124 62-204 1-132 (159)
8 COG5650 Predicted integral mem 98.1 5.6E-06 1.2E-10 85.6 7.3 187 31-237 103-293 (536)
9 COG1807 ArnT 4-amino-4-deoxy-L 97.8 0.00093 2E-08 68.7 17.8 169 9-201 8-192 (535)
10 PF05208 ALG3: ALG3 protein; 97.7 0.00014 3E-09 72.8 9.3 102 154-264 130-231 (368)
11 PF02366 PMT: Dolichyl-phospha 97.0 0.0097 2.1E-07 55.0 11.6 101 98-199 80-195 (245)
12 PLN02841 GPI mannosyltransfera 96.9 0.021 4.5E-07 58.8 13.9 121 60-202 63-185 (440)
13 PF06728 PIG-U: GPI transamida 96.6 0.067 1.4E-06 53.7 15.2 127 61-203 56-195 (382)
14 KOG2762 Mannosyltransferase [C 96.6 0.0052 1.1E-07 61.7 6.9 102 154-264 158-259 (429)
15 PRK13279 arnT 4-amino-4-deoxy- 96.4 0.067 1.5E-06 56.5 14.2 156 54-237 55-225 (552)
16 KOG3893 Mannosyltransferase [C 96.1 0.02 4.4E-07 56.9 8.0 133 102-236 97-238 (405)
17 PF10131 PTPS_related: 6-pyruv 96.1 0.18 4E-06 53.9 15.4 153 63-236 4-169 (616)
18 PRK13375 pimE mannosyltransfer 95.7 2.1 4.5E-05 44.0 20.4 187 10-233 20-221 (409)
19 PF05007 Mannosyl_trans: Manno 95.6 0.04 8.6E-07 53.1 7.3 80 154-233 8-91 (259)
20 PF04188 Mannosyl_trans2: Mann 94.1 0.97 2.1E-05 46.4 13.3 117 119-237 131-250 (443)
21 PF09852 DUF2079: Predicted me 94.0 0.66 1.4E-05 47.3 11.9 88 117-204 76-165 (449)
22 TIGR03663 conserved hypothetic 92.6 9.1 0.0002 39.4 17.5 95 101-197 71-173 (439)
23 TIGR03766 conserved hypothetic 92.2 6.9 0.00015 40.5 16.2 97 102-206 141-255 (483)
24 PF14897 EpsG: EpsG family 92.0 3.1 6.8E-05 39.0 12.4 141 30-201 22-162 (330)
25 PF09913 DUF2142: Predicted me 88.1 8.7 0.00019 37.9 12.4 120 63-199 95-223 (389)
26 COG1928 PMT1 Dolichyl-phosphat 83.1 11 0.00025 41.2 11.1 147 49-203 59-225 (699)
27 PF03901 Glyco_transf_22: Alg9 81.5 54 0.0012 32.8 14.7 102 100-202 81-195 (418)
28 COG1287 Uncharacterized membra 79.1 41 0.0009 37.1 13.9 110 58-186 80-207 (773)
29 COG3463 Predicted membrane pro 71.3 1.2E+02 0.0026 31.9 13.9 148 118-267 105-267 (458)
30 PF02516 STT3: Oligosaccharyl 67.5 49 0.0011 33.4 10.3 91 61-166 68-165 (483)
31 PF14264 Glucos_trans_II: Gluc 64.9 1.2E+02 0.0026 29.0 12.0 97 109-207 55-161 (319)
32 PHA01514 O-antigen conversion 64.5 2E+02 0.0043 30.6 20.9 159 1-196 1-172 (485)
33 KOG3359 Dolichyl-phosphate-man 54.7 3.4E+02 0.0075 30.3 14.4 135 62-204 82-238 (723)
34 PF11028 DUF2723: Protein of u 43.0 2.6E+02 0.0057 25.5 9.8 59 146-204 95-169 (178)
35 KOG2647 Predicted Dolichyl-pho 40.7 1.1E+02 0.0024 32.0 7.6 131 127-266 154-286 (444)
36 COG5305 Predicted membrane pro 39.4 5.3E+02 0.011 27.9 14.7 169 98-277 114-302 (552)
37 PF09586 YfhO: Bacterial membr 32.5 7E+02 0.015 27.3 16.1 184 29-237 27-236 (843)
38 KOG2515 Mannosyltransferase [C 32.4 6.7E+02 0.014 27.0 15.6 170 14-203 12-200 (568)
39 PF10067 DUF2306: Predicted me 27.4 33 0.00071 28.2 1.2 16 29-44 64-79 (103)
40 TIGR03063 srtB_target sortase 21.1 87 0.0019 20.8 2.0 17 188-204 9-27 (29)
41 PRK10649 hypothetical protein; 20.7 9.5E+02 0.021 25.8 10.9 37 170-206 106-142 (577)
No 1
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=100.00 E-value=1.3e-115 Score=853.95 Aligned_cols=311 Identities=55% Similarity=0.995 Sum_probs=292.1
Q ss_pred cchhHHHHH-HHHHHHHHHHHcccccCcchHHhhHHHHHhccCCcccccccCCCcccCCCCchhHHHHHHhhhhcc--cc
Q 019776 5 SSTRQLLWF-FAIAVCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAH--YI 81 (336)
Q Consensus 5 ~~~~~~~w~-~~~~~~lk~ll~p~y~stDfEvhRnWmaiT~~LPls~WY~~~ts~WtLDYPPlfAy~e~llg~ia~--~~ 81 (336)
+++++++|. .++.+++|++|+|+|||||||||||||||||++|++|||+|+|||||||||||||||||.+|++|+ .+
T Consensus 1 ~g~~~ll~~~~~~~t~lK~LLIP~Y~STDFEVHRNWLAIT~slPlseWY~eaTSeWTLDYPPFFAYFE~~LS~vA~ff~f 80 (500)
T KOG2576|consen 1 MGKRQLLWAFAIITTFLKCLLIPAYRSTDFEVHRNWLAITHSLPLSEWYYEATSEWTLDYPPFFAYFEWFLSQVAKFFGF 80 (500)
T ss_pred CchhHhHHHHHHHHHHHHheeeccccccchhhhhhHHHHhccCchHHHHHhcccceecCCCcHHHHHHHHHHHHHHHhcC
Confidence 367899995 566789999999999999999999999999999999999999999999999999999999999999 68
Q ss_pred CCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHH---HHhccc--hhhHHHHHHHHHHccceeeeeccchhhhhH
Q 019776 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYR---LTKNAD--VKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (336)
Q Consensus 82 dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~---~~~~~~--~~~~~~~~~~~llnPgLiiiDhiHFQYNg~ 156 (336)
||+|+++ .|.||+|.++++|||.|||++|+++++++.+ ..++.+ .+++.+.+.++++|||++||||||||||||
T Consensus 81 D~~ml~~-~~l~y~s~~tl~FQR~SVIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgf 159 (500)
T KOG2576|consen 81 DPRMLDV-KNLNYFSRRTLYFQRFSVIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGF 159 (500)
T ss_pred Cchheec-cccCCCCcceEEEEeehhHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccH
Confidence 9999999 8899999999999999999999999998742 334444 345677788899999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccc--c-chhhHHHHHHHHHHHHHHHHHh
Q 019776 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGL--V-RGFSRLSVLGAVVVAVFAAAYG 233 (336)
Q Consensus 157 llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~--~-~~~~rli~Lg~~Vi~tfal~f~ 233 (336)
++|++++||.++.++|+++||+.|++++|||||++|+||+||+|+||.||..+. . .++.|.+|+|++|+++|++++|
T Consensus 160 LfgilLlSI~~l~~kr~l~~A~~fsvll~FKHIflY~ApaY~vylLr~Yc~~~nn~~~~~~~~vikL~~vv~~~F~~s~g 239 (500)
T KOG2576|consen 160 LFGILLLSIVFLKTKRYLLSAFLFSVLLNFKHIFLYVAPAYFVYLLRNYCLTSNNVFLANFLNVIKLGIVVLIPFAASFG 239 (500)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhheeeechhHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999998742 1 2688999999999999999999
Q ss_pred hhhhhhhhhhhhhhhccCCCccchhhhcchhHHHHHHHHHHHHHHhhhcCcccccCCccccccccccccCcccCCCCChh
Q 019776 234 PFLYHGQIQQVFNRMFPFGRGLCHAYWAPNFWVFYIILDKVFSFFLKKFGFSIQIPAASFTGGLVGDSSPFAVLPKVIAC 313 (336)
Q Consensus 234 PFl~~~~l~qvl~RLFPf~RGL~haywA~NfWaly~~~dk~l~~~~~~~~~~~~~~~~~~t~glv~~~~~~~vlp~i~p~ 313 (336)
||+..+|+||+++|||||+||||||||||||||+||++||++..+++|+|...+.+++++|+|||||.+ |+|||+|||.
T Consensus 240 Pf~~~~qlpqvlSRLFPfsRGLtHAYWAPNFWALYnf~Dk~l~~vl~kl~~~~~~~~as~tsGLVq~~~-hsVLp~itp~ 318 (500)
T KOG2576|consen 240 PFIYVQQLPQVLSRLFPFSRGLTHAYWAPNFWALYNFADKVLAVVLLKLKYGINFPTASYTSGLVQDSS-HSVLPQITPL 318 (500)
T ss_pred cHHHHHHhHHHHHHhCCcccccchhhccchHHHHHHHHHHHHHHHHHHccccccCCccccCCccccCcc-eeeccCCCch
Confidence 999999999999999999999999999999999999999999999999999989999999999999999 9999999999
Q ss_pred HHHH
Q 019776 314 NRLK 317 (336)
Q Consensus 314 ~t~~ 317 (336)
+||+
T Consensus 319 ~TF~ 322 (500)
T KOG2576|consen 319 ATFA 322 (500)
T ss_pred HHHH
Confidence 9998
No 2
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=100.00 E-value=4e-102 Score=782.67 Aligned_cols=261 Identities=50% Similarity=0.952 Sum_probs=244.4
Q ss_pred HHHHHHHH--HcccccC------cchHHhhHHHHHhccCCcccccccCCCc---ccCCCCchhHHHHHHhhhhccc-cCC
Q 019776 16 IAVCVKLL--LIPAYHS------TDFEVHRHWLALTHSLPLSNWYADETSP---WTLDYPPFFACFERFLSIFAHY-IDP 83 (336)
Q Consensus 16 ~~~~lk~l--l~p~y~s------tDfEvhRnWmaiT~~LPls~WY~~~ts~---WtLDYPPlfAy~e~llg~ia~~-~dp 83 (336)
+++++|++ |.|.|+| |||||||||||||+|||++|||+|+||+ ||||||||||||||++||+|++ +||
T Consensus 2 ~~~~~r~~v~l~p~s~~~~ppm~gDfEaqRhWmeiT~~LP~~~WY~~~t~~l~yW~LDYPPl~Ay~~~~lg~~a~~~~~p 81 (469)
T PF03155_consen 2 IATLLRLLVSLGPYSGSGTPPMYGDFEAQRHWMEITHNLPISEWYFNDTSNLQYWGLDYPPLFAYFSWLLGKIAHFFIDP 81 (469)
T ss_pred ceeHHHHHHHcCCcccCCCCCCCCcHHHHHHHHHHHccCCHHHHHhcCCCccCcCcCCCCchHHHHHHHHHhhccccCCc
Confidence 57899999 9999999 9999999999999999999999999766 9999999999999999999999 899
Q ss_pred ceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHH-HHHHHhcc------chhhHHHHHHHHHHccceeeeeccchhhhhH
Q 019776 84 QIVDLHNGLNYRANSAIYFLRISVILSDLWLLYG-VYRLTKNA------DVKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (336)
Q Consensus 84 ~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a-~~~~~~~~------~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~ 156 (336)
+|+++.+||||||+++|+|||.|||++|++++++ ++.+++.. +++++.+..+++++|||+|+||||||||||+
T Consensus 82 ~~~~l~~s~g~~s~~~~~f~R~tVi~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~PgLilIDH~HFQYN~~ 161 (469)
T PF03155_consen 82 EWVALVSSRGYESPSHKLFMRLTVIVSDLLLYIPAVLFFCKSSGRSRNQSSKQRFIALLLILLNPGLILIDHGHFQYNGF 161 (469)
T ss_pred hhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHCchHHhhhhhhhhHHHH
Confidence 9999889999999999999999999999999885 77777644 3445677788899999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhc-ccc-chhhHHHHHHHHHHHHHHHHHhh
Q 019776 157 LLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWK-GLV-RGFSRLSVLGAVVVAVFAAAYGP 234 (336)
Q Consensus 157 llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~-~~~-~~~~rli~Lg~~Vi~tfal~f~P 234 (336)
|+|++++|++++.+||+++||++|+++||+|||+||+||+||+||||+ |.+ +.. .+++|++++|++|++||+++|+|
T Consensus 162 ~lGl~l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap~~f~yLL~~-c~~~~~~~~~~~~~~~lg~~Vi~~f~~~~~P 240 (469)
T PF03155_consen 162 LLGLLLLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAPAFFVYLLGS-CFQRKSFRFSIKRLIKLGIVVIATFALSFGP 240 (469)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 554 322 37899999999999999999999
Q ss_pred hhhhhhhhhhhhhhccCCCccchhhhcchhHHHHHHHHHHHHHH
Q 019776 235 FLYHGQIQQVFNRMFPFGRGLCHAYWAPNFWVFYIILDKVFSFF 278 (336)
Q Consensus 235 Fl~~~~l~qvl~RLFPf~RGL~haywA~NfWaly~~~dk~l~~~ 278 (336)
|+..+|++|+++|||||+||||||||| ||||+||++||++..+
T Consensus 241 F~~~~~l~Qvl~RlFPF~RGL~hdy~A-NfW~~~~~~~K~~~~~ 283 (469)
T PF03155_consen 241 FLYSGQLQQVLSRLFPFKRGLFHDYWA-NFWCLYNFVDKVLNLF 283 (469)
T ss_pred HHHhhhHHHHHHHhCccccchHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998 9999999999998775
No 3
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-85 Score=644.17 Aligned_cols=263 Identities=32% Similarity=0.604 Sum_probs=237.0
Q ss_pred HHHHHHHHHHHHc-ccc-------cCcchHHhhHHHHHhccCCccccccc----CCCcccCCCCchhHHHHHHhhhhccc
Q 019776 13 FFAIAVCVKLLLI-PAY-------HSTDFEVHRHWLALTHSLPLSNWYAD----ETSPWTLDYPPFFACFERFLSIFAHY 80 (336)
Q Consensus 13 ~~~~~~~lk~ll~-p~y-------~stDfEvhRnWmaiT~~LPls~WY~~----~ts~WtLDYPPlfAy~e~llg~ia~~ 80 (336)
+..++.++|...- .+| +.|||||||||||||.|||++|||.| |.+||||||||+||||+|++|.++++
T Consensus 36 i~~~~l~~r~~Isl~pYSG~~~PPmyGDyEAQRHWmEIT~nLPv~qWY~n~t~NDLqYWGLDYPPLTAYhSyl~G~i~~f 115 (510)
T KOG2575|consen 36 ILLVLLCVRSAISLNPYSGAGSPPMYGDYEAQRHWMEITVNLPVSQWYFNGTHNDLQYWGLDYPPLTAYHSYLLGIIGNF 115 (510)
T ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHHhhcCcHHHHhhcCCCCccceecCCCCcHHHHHHHHHHHHHhh
Confidence 4556788888765 233 56999999999999999999999999 55999999999999999999999999
Q ss_pred cCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHH-HHHHHHhcc----chhhHHHHHHHHHHccceeeeeccchhhhh
Q 019776 81 IDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLY-GVYRLTKNA----DVKRRYLIWVLIVWSPALVMVDHLHFQYNG 155 (336)
Q Consensus 81 ~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~-a~~~~~~~~----~~~~~~~~~~~~llnPgLiiiDhiHFQYNg 155 (336)
+||+|+++++||||||..+|+|||.|||++|++++. |+..++++. ++..+.+.++.++++|++++|||||||||+
T Consensus 116 ~NP~wvaL~tSRGfES~~hKlfMR~TViisd~liy~Pa~ify~~~~~r~~~~~~~~a~~~~iLl~P~L~LID~GHFQYNs 195 (510)
T KOG2575|consen 116 INPEWVALHTSRGFESIAHKLFMRSTVIISDLLIYLPALIFYFKWLHRTRSKKSKIAYAALILLYPSLLLIDHGHFQYNS 195 (510)
T ss_pred cChhHhhhhccCCcccHHHHHHHHHHHHHHhHHHHhhHHHHHHHHhhhccCcccHHHHHHHHHhCCceEEEecCcceech
Confidence 999999999999999999999999999999999965 777776655 333455567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhh
Q 019776 156 FLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPF 235 (336)
Q Consensus 156 ~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~PF 235 (336)
+|+|+.++||+.+.++++++|+++|++|||+|||+||+||++|+|||++|..++...++.|++++|++|++||+++|.||
T Consensus 196 isLGl~~~ai~~ll~~~~~~as~~F~LAlnyKQMeLY~A~pfF~fLLg~c~k~k~~~~f~ri~~ia~~Vv~TF~iiw~P~ 275 (510)
T KOG2575|consen 196 ISLGLTLYAIAALLKNFYVLASVLFVLALNYKQMELYHALPFFAFLLGSCLKPKLFNSFARIIKIALAVVGTFVIIWLPF 275 (510)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999975554443478999999999999999999999
Q ss_pred hhhh-hhhhhhhhhccCCCccchhhhcchhHHHHHHHHHHHH
Q 019776 236 LYHG-QIQQVFNRMFPFGRGLCHAYWAPNFWVFYIILDKVFS 276 (336)
Q Consensus 236 l~~~-~l~qvl~RLFPf~RGL~haywA~NfWaly~~~dk~l~ 276 (336)
+..+ +..|++||+|||.||++|||+ +||||..|+.-|...
T Consensus 276 ~~~~~~~~qvl~RlFPf~RGlfEDKV-ANfWCt~n~~~K~k~ 316 (510)
T KOG2575|consen 276 LLSGDTALQVLHRLFPFARGLFEDKV-ANFWCTFNVFLKIKE 316 (510)
T ss_pred HhccchHHHHHHHhCchhcchhhhhh-hhhhhhhhhhhhhhh
Confidence 9865 899999999999999999995 699999999988743
No 4
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=99.04 E-value=4.9e-09 Score=106.98 Aligned_cols=167 Identities=17% Similarity=0.224 Sum_probs=125.9
Q ss_pred HHHHcccccCcchH---HhhHHHHHhcc---C-Cc--ccccccCC-Ccc---cCCCCchhHHHHHHhhhhccccCCceEE
Q 019776 21 KLLLIPAYHSTDFE---VHRHWLALTHS---L-PL--SNWYADET-SPW---TLDYPPFFACFERFLSIFAHYIDPQIVD 87 (336)
Q Consensus 21 k~ll~p~y~stDfE---vhRnWmaiT~~---L-Pl--s~WY~~~t-s~W---tLDYPPlfAy~e~llg~ia~~~dp~~l~ 87 (336)
=+++.|.-.|.|+- +|-.=+.-..+ . |- .+...++- ..| +..|||++.+.+-..+.+ ..+.+.
T Consensus 88 Pll~a~PlfSrDvYsYlaqG~l~~~G~dPY~~gP~~~~~~~~~~v~~~W~~t~aPYGPl~l~i~~~v~~l----~g~~i~ 163 (470)
T TIGR03459 88 PLLFAVPMMSRDVYSYLMQGALLRDGFDPYTVGAAANPGPLLDEVSPDWRNTTTPYGPLHLLVGQAITTV----TGDNVT 163 (470)
T ss_pred HHHhcCCcccHHHHHHHHHHHHHHcCCCccccCCccCCchHhhhcCchhccCCCCCChHHHHHHHHHHHH----hCCCcH
Confidence 45566777888876 66444421111 0 11 12222222 232 468999999998888877 222222
Q ss_pred eccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHccceee--eeccchhhhhHHHHHHHHHH
Q 019776 88 LHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPALVM--VDHLHFQYNGFLLGWLLLSI 165 (336)
Q Consensus 88 l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~~~~~~~~~~~llnPgLii--iDhiHFQYNg~llGllllSi 165 (336)
..++.+|+..+++|+++.+++.++.|+.+.+.+.+ .-+..+||-+|+ +.++|+ |++|.|+++.++
T Consensus 164 ----------~~v~~~Rl~~l~g~~l~~w~~~rLar~~g~~~~~A-lWL~~~NPLviihlvgg~Hn--ealM~gl~l~gl 230 (470)
T TIGR03459 164 ----------AGTLAFKLLSLPGLAVMVWAVPKLATHLGGNPTVA-LWLGVLNPLVVIHLIGGMHN--EMLMVGLVSAGI 230 (470)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHcCchhhhhhhcchhH--HHHHHHHHHHHH
Confidence 26789999999999999999999999886655442 334678999998 899999 999999999999
Q ss_pred HHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 019776 166 SFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (336)
Q Consensus 166 ~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~ 204 (336)
++..++|.+.|+++.+++.+.|...+...|.++.+..++
T Consensus 231 ~~~~r~~~~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~ 269 (470)
T TIGR03459 231 LLALKRRPVAGIALIAVAVALKATAGIALPFVVWIWVAH 269 (470)
T ss_pred HHHHhcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887666665
No 5
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=98.37 E-value=5e-06 Score=75.03 Aligned_cols=154 Identities=24% Similarity=0.357 Sum_probs=92.7
Q ss_pred CCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccchh----hHHHHHHHHH
Q 019776 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVK----RRYLIWVLIV 138 (336)
Q Consensus 63 YPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~~----~~~~~~~~~l 138 (336)
|||++++.....+.+ +++. ....... ++.+.+...++...+..+++ .........+
T Consensus 3 YpP~~~~l~~p~~~l----~~~~-------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (241)
T PF09594_consen 3 YPPLFALLFAPLALL----PFPV-------------AFLLWAL---LSLAALALAVRLLLRRLGRRKPPGRALLLALLLL 62 (241)
T ss_pred CcHHHHHHHHHHHHc----CHHH-------------HHHHHHH---HHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHH
Confidence 999999999999865 2210 1112222 23333333344444443221 1222222334
Q ss_pred HccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHH
Q 019776 139 WSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLS 218 (336)
Q Consensus 139 lnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli 218 (336)
.++.+ ..+..-.|.|.+...+++.++.+.+++|+.++|++++++...|+.++.+.|.+.. + +++|+..
T Consensus 63 ~~~p~-~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll~---~--------r~~r~~~ 130 (241)
T PF09594_consen 63 AFPPV-LSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALLI---R--------RRWRAAL 130 (241)
T ss_pred HHHHH-HHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHh---c--------chHHHHH
Confidence 44444 4466667889999999999999999999999999999999999999988883322 2 2566666
Q ss_pred HHHHHHHHHHHHHHhhhhhh--hhhhhhhhhhccC
Q 019776 219 VLGAVVVAVFAAAYGPFLYH--GQIQQVFNRMFPF 251 (336)
Q Consensus 219 ~Lg~~Vi~tfal~f~PFl~~--~~l~qvl~RLFPf 251 (336)
....+..+.+++ |+... +......+-++..
T Consensus 131 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 162 (241)
T PF09594_consen 131 WAAATAAVLFAL---PFLLFGPDSWQDFLSVLFQN 162 (241)
T ss_pred HHHHHHHHHHHH---HHHHcCchHHHHHHHHHHHH
Confidence 554433333333 55432 3344444433333
No 6
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=98.36 E-value=1.8e-06 Score=86.95 Aligned_cols=182 Identities=18% Similarity=0.271 Sum_probs=134.7
Q ss_pred ccCcchHHh-hHHHHHhccCC-cccccccCCCcccCCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHH
Q 019776 28 YHSTDFEVH-RHWLALTHSLP-LSNWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRI 105 (336)
Q Consensus 28 y~stDfEvh-RnWmaiT~~LP-ls~WY~~~ts~WtLDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~ 105 (336)
-+|-|+-.+ -||-++-..-- ..+-+.++ -.||+|++-|..-+.++++.-.. -.+--.+
T Consensus 62 ~~s~~~~~fl~~w~af~~~~~~f~~~~k~~----~~~~~p~~~y~i~ii~~L~~~~~----------------~~l~~~l 121 (420)
T COG5542 62 NRSVIYAPFLVHWYAFIALNGGFVRVLKSH----FADYFPLYLYWIRIINKLLSSLY----------------FILAIKL 121 (420)
T ss_pred CcchhhhHHHHHHHHHHHhhhhhhhhhhcc----ccccCchHHHHHHHHHHHHhhhH----------------HHHHHHH
Confidence 355555554 56655533211 11222222 27999999999999999965522 2234567
Q ss_pred HHHHHHHHHHHHHHHHHhcc-c--hhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 019776 106 SVILSDLWLLYGVYRLTKNA-D--VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAV 182 (336)
Q Consensus 106 tVIvsDlll~~a~~~~~~~~-~--~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~Fal 182 (336)
..+++|.+..+.+|+..|.. + +..++ +..++.++|..+...-++.|=+|+-.-+.+++++++.+++...|+++|++
T Consensus 122 ~s~~~~~~~ay~lY~~tk~~y~~~~~a~f-a~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faL 200 (420)
T COG5542 122 FSNIADFVAAYFLYKITKLRYGLGSMARF-ATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFAL 200 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhhh-eEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHH
Confidence 88899999999999998754 2 33333 34566788999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 019776 183 LLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (336)
Q Consensus 183 aL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~PFl~ 237 (336)
+..+|...+..+|.+.+.+.+. ++.+........+-.+......|...
T Consensus 201 a~l~Rsngi~~~p~fl~~~ik~-------~~ik~i~~~l~~~~l~~~~ll~~~~~ 248 (420)
T COG5542 201 ATLFRSNGIFLSPLFLIPLIKN-------RKIKIIWYLLPSGSLTYLSLLMPAWI 248 (420)
T ss_pred HHHhccchhHHHHHHHHHHHhh-------hhHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999776 23555555555555556666666643
No 7
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=98.15 E-value=7.9e-05 Score=62.68 Aligned_cols=124 Identities=21% Similarity=0.365 Sum_probs=96.4
Q ss_pred CCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHc
Q 019776 62 DYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWS 140 (336)
Q Consensus 62 DYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~-~~~~~~~~~~~~lln 140 (336)
|=||++.|......++- + + +..-.|+..++.-.+....+++..|+. +++.+....+++.+.
T Consensus 1 ~~pPl~~~~~~~~~~l~---G--------------~-~~~~~~~~~~l~~~~~~~~~y~i~r~~~~~~~a~~~~l~~~~~ 62 (159)
T PF13231_consen 1 DHPPLYFLLLALFFKLF---G--------------D-SVWALRLFNILFSLLTLLLIYLIARRLFGRRAALIAALLLALS 62 (159)
T ss_pred CCChHHHHHHHHHHHHh---C--------------c-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHh
Confidence 56999999998888771 1 1 345679999999999988999988877 445556667777889
Q ss_pred cceeeeeccchhhhhHHHHHHHHHHHHHH----cCC---chHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 019776 141 PALVMVDHLHFQYNGFLLGWLLLSISFLQ----EGK---DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (336)
Q Consensus 141 PgLiiiDhiHFQYNg~llGllllSi~~l~----~~r---~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~ 204 (336)
|..+.-.. ..+-|..+..+.+++++... +++ .++++++++++...|+..+.+.|+.+++++.+
T Consensus 63 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~~l~~~ 132 (159)
T PF13231_consen 63 PMFIFYSA-SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLLYLLLS 132 (159)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776443 67778888888888887654 232 45799999999999999999999999887765
No 8
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=98.11 E-value=5.6e-06 Score=85.57 Aligned_cols=187 Identities=17% Similarity=0.209 Sum_probs=118.5
Q ss_pred cchHHhhHHHHHhccCCcccccccCCC---cccCCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHH
Q 019776 31 TDFEVHRHWLALTHSLPLSNWYADETS---PWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISV 107 (336)
Q Consensus 31 tDfEvhRnWmaiT~~LPls~WY~~~ts---~WtLDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tV 107 (336)
.|||.--+|+++-.+ .+|+..++| .. .-||++.-=..+. |.+....=|+-.++ -... +.. ..-+=.+|
T Consensus 103 ~~~p~~asw~~vh~~---~P~~r~~ms~af~y-~~yPv~~~~y~~~-~~v~~~~Y~~L~~l-l~lP-~~~--ef~~~f~V 173 (536)
T COG5650 103 LTFPYYASWLEVHGF---DPYVRYNMSKAFRY-MHYPVLGTPYQTG-GYVIYFSYPGLSAL-LFLP-VLF--EFNPFFKV 173 (536)
T ss_pred ccchhhhhheeecCC---Cccchhhhhhhhee-EeeccccCccccc-ceEEEEEecchhhh-ccCc-ccc--ccchhhhH
Confidence 399999999987544 566666654 22 5899987211111 11212222221111 1111 111 11233444
Q ss_pred HHHHHHHHH-HHHHHHhccchhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhh
Q 019776 108 ILSDLWLLY-GVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCF 186 (336)
Q Consensus 108 IvsDlll~~-a~~~~~~~~~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~f 186 (336)
.+.-+.++. .+..+.|+--..++.+..++...+|-+...|-.-| +.+-.+++..+..+ ++|..+||++++++..+
T Consensus 174 ~AF~~A~~~l~~i~~~r~gl~~~~~~~valv~as~~v~f~v~~~~--DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~ 249 (536)
T COG5650 174 LAFLLALIWLLVIYFIRKGLAGSRVLDVALVAASPLVGFAVFTVF--DTIWAFFLAAALVC--RGRPKLAGVLIGLSSAF 249 (536)
T ss_pred HHHHHHHHHHHHHHHHHhcccccceeeeeeeeccceEEEEEecch--hHHHHHHHHHHHHh--cCCchHHHHHHHHHHHh
Confidence 444444432 33334433222334445566778993334555544 88888888777777 99999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 019776 187 KHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (336)
Q Consensus 187 Khm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~PFl~ 237 (336)
||.+++++|++..++-+.| +.+...+...+.++|++++.+||+.
T Consensus 250 K~~P~Ivl~pll~~~~key-------g~~~a~~f~~~aa~t~lLvN~PfiI 293 (536)
T COG5650 250 KQIPLIVLPPLLYLIYKEY-------GLRPAIKFIATAAITWLLVNLPFII 293 (536)
T ss_pred hcCchhhHHHHHHHHHHhc-------CcchHHHHHHHHHHHHHHHcCceEE
Confidence 9999999999988886652 5677888889999999999999995
No 9
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.85 E-value=0.00093 Score=68.70 Aligned_cols=169 Identities=19% Similarity=0.235 Sum_probs=116.1
Q ss_pred HHHH-HHHHHHHHHHHHcccccCcc------hHHhhHHHHHhccCCcccccccCCCcccCCCCchhHHHHHHhhhhcccc
Q 019776 9 QLLW-FFAIAVCVKLLLIPAYHSTD------FEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHYI 81 (336)
Q Consensus 9 ~~~w-~~~~~~~lk~ll~p~y~stD------fEvhRnWmaiT~~LPls~WY~~~ts~WtLDYPPlfAy~e~llg~ia~~~ 81 (336)
...| ++..++.+.+..+..+...| .|++|+.+|...+ +..++. +..| .|.||+..|...+.-++-.
T Consensus 8 ~~~~llll~~~~~~l~~l~~~~~~~~de~~~~~~~~~m~~s~~w--~~~~~~-g~~~--~~kPPl~~Wl~a~~~~lfG-- 80 (535)
T COG1807 8 LLLWLLLLIALALLLPGLGSRPLWDPDEARYAEIAREMLESGDW--FTPQLL-GLPY--FEKPPLVYWLQALSYLLFG-- 80 (535)
T ss_pred HHHHHHHHHHHHHHhCccccCCCCCCCchhHHHHHHHHHHcCCC--cceeeC-Cccc--cCCCcHHHHHHHHHHHHcC--
Confidence 3444 45556666666555555455 9999999986544 444444 4444 4999999998886555521
Q ss_pred CCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHccceeeeeccchhhhhHHHHH
Q 019776 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV-KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGW 160 (336)
Q Consensus 82 dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~-~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGl 160 (336)
.+-.-.|+...++=.+..+.+|.+.|...+ +...++++.+++.|.++...+.+- =|..+..+
T Consensus 81 ----------------~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~~~a~~aali~~~~p~~~~~~~~~~-~D~~l~~f 143 (535)
T COG1807 81 ----------------VNEWSARLPSALAGALTALLVYWLAKRLFGRLAALLAALILLLTPLFFLIGRLAL-LDAALAFF 143 (535)
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhHHHh-hhHHHHHH
Confidence 123468999998888778888988887743 345566778888999988665543 46677777
Q ss_pred HHHHHHHHH---cC--C---chHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q 019776 161 LLLSISFLQ---EG--K---DLMGGFLFAVLLCFKHLFAVAAPVYFVYL 201 (336)
Q Consensus 161 lllSi~~l~---~~--r---~ll~a~~FalaL~fKhm~LY~APa~FvyL 201 (336)
+.+|++++. ++ + .+..++..+++.+.|-...++.|+.+..+
T Consensus 144 ~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~~~~~~~ 192 (535)
T COG1807 144 LTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLPLILLLL 192 (535)
T ss_pred HHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 777777654 21 1 25678999999999999999999534433
No 10
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=97.74 E-value=0.00014 Score=72.84 Aligned_cols=102 Identities=25% Similarity=0.369 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHh
Q 019776 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (336)
Q Consensus 154 Ng~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~ 233 (336)
+|+...++..|+.++.++|..+|+++||++++.|-=.|.++|++.+.++.. .+..+.+....+..++-.+.-.
T Consensus 130 D~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~~-------~g~~~~~~~l~v~~~vQvllg~ 202 (368)
T PF05208_consen 130 DCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQS-------LGLLKTLWYLAVCALVQVLLGL 202 (368)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHhh
Confidence 466677777899999999999999999999999999999999998888765 3577788888888888889999
Q ss_pred hhhhhhhhhhhhhhhccCCCccchhhhcchh
Q 019776 234 PFLYHGQIQQVFNRMFPFGRGLCHAYWAPNF 264 (336)
Q Consensus 234 PFl~~~~l~qvl~RLFPf~RGL~haywA~Nf 264 (336)
||+. ..-...++|=|-|+|-..+. |-.|+
T Consensus 203 PFL~-~~p~~Yl~~AFdf~R~Fl~k-WTVNw 231 (368)
T PF05208_consen 203 PFLL-TNPWSYLSRAFDFSRQFLYK-WTVNW 231 (368)
T ss_pred HHHH-hCHHHHHHHhcccCceEEEE-EEEee
Confidence 9996 34457999999999998875 56675
No 11
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=96.99 E-value=0.0097 Score=55.03 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=72.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccc--hhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcC----
Q 019776 98 SAIYFLRISVILSDLWLLYGVYRLTKNAD--VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEG---- 171 (336)
Q Consensus 98 ~~v~FmR~tVIvsDlll~~a~~~~~~~~~--~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~---- 171 (336)
....-+|....++-.+....++...++.. +....+.+++++++|.++...+ .--=|+.+..+.++|++++.+.
T Consensus 80 ~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr-~~~~D~~l~~f~~la~~~~~~~~~~~ 158 (245)
T PF02366_consen 80 VNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSR-YALLDSILLFFILLAIYCLLRWYRYQ 158 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 35567899999999988888888877763 3344556777888998876433 2223677777777777765543
Q ss_pred --------CchHHHHHHHHHhhhhhhhHHHH-HHHHH
Q 019776 172 --------KDLMGGFLFAVLLCFKHLFAVAA-PVYFV 199 (336)
Q Consensus 172 --------r~ll~a~~FalaL~fKhm~LY~A-Pa~Fv 199 (336)
..+++++..++++..|....+.. |+.+.
T Consensus 159 ~~~~~~~~~~~l~gi~lGla~~~K~~~~~~~~~~~~~ 195 (245)
T PF02366_consen 159 PFRRKWWLWLLLAGIALGLAILTKGPGLLLVLPAGLL 195 (245)
T ss_pred ccccccHHHHHHHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 24678999999999999988765 43333
No 12
>PLN02841 GPI mannosyltransferase
Probab=96.88 E-value=0.021 Score=58.76 Aligned_cols=121 Identities=15% Similarity=0.166 Sum_probs=91.0
Q ss_pred cCCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccc--hhhHHHHHHHH
Q 019776 60 TLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNAD--VKRRYLIWVLI 137 (336)
Q Consensus 60 tLDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~--~~~~~~~~~~~ 137 (336)
|--|||+-||.. -|+.. + +..|-+.-=+++|++..+.+++..+..+ .+.....++++
T Consensus 63 TYrytPLLa~Ll----------lPn~~-~----------~~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~w 121 (440)
T PLN02841 63 TYRYSPLLALLL----------VPNSL-L----------HRSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVW 121 (440)
T ss_pred CCCcChHHHHHH----------cchhh-h----------hhhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHH
Confidence 467999999977 12210 0 1235666677999999888887775432 22234456778
Q ss_pred HHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 019776 138 VWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLL 202 (336)
Q Consensus 138 llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL 202 (336)
++||-.+.+.-. .-=+++.-.+.+++++++.+||...||++++++..+|-=++.++|++..++-
T Consensus 122 L~NPlti~istr-GSse~i~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~l~ 185 (440)
T PLN02841 122 LFNPFTFTIGTR-GNCEPIVCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILVLD 185 (440)
T ss_pred HhCcHHHHHhcc-cchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHhc
Confidence 999999986432 2236777778889999999999999999999999999999999999988883
No 13
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.63 E-value=0.067 Score=53.74 Aligned_cols=127 Identities=17% Similarity=0.328 Sum_probs=95.8
Q ss_pred CCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccch-------------
Q 019776 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADV------------- 127 (336)
Q Consensus 61 LDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~------------- 127 (336)
..+||+..+....+.+ ...++........+--+++|++..+.+++..+..++
T Consensus 56 ~h~~PLlL~l~~~l~~---------------~~~~~~~~~~~~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~ 120 (382)
T PF06728_consen 56 FHQPPLLLALFSFLLK---------------SSPNSPNSPILISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKS 120 (382)
T ss_pred ccCcCHHHHHHHHHHh---------------cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcc
Confidence 6799999887766643 011222344456677779999998888877644311
Q ss_pred hhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 019776 128 KRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLR 203 (336)
Q Consensus 128 ~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~ 203 (336)
......++.+++||-.|+ -.+--.=..+---+++.|++.+.+|+...+++..+++--...=++++.|+....+.+
T Consensus 121 ~~~~lv~~~YLfNP~tIl-scva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~~ 195 (382)
T PF06728_consen 121 SSPWLVAAFYLFNPLTIL-SCVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATYLSLYPILLLPPLLLLLYS 195 (382)
T ss_pred cchHHHHHHHHHCHHHHH-HHHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 234567889999999998 444444577778888999999999999999999999999999999999998877766
No 14
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=96.60 E-value=0.0052 Score=61.66 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHh
Q 019776 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (336)
Q Consensus 154 Ng~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~ 233 (336)
+++-.-++-.++....++|.++|+++||+|+..|-=.|-+||++++.+|..-- -.+.+..+++. +++-.+.-+
T Consensus 158 D~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~~~------~~~tl~~L~v~-~~vQilvg~ 230 (429)
T KOG2762|consen 158 DPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQNLG------PIGTLLHLAVC-ILVQILVGL 230 (429)
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHhcc------HHHHHHHHHHH-HHHHHHHcC
Confidence 35566677788888899999999999999999999999999999999987621 23344444433 344455667
Q ss_pred hhhhhhhhhhhhhhhccCCCccchhhhcchh
Q 019776 234 PFLYHGQIQQVFNRMFPFGRGLCHAYWAPNF 264 (336)
Q Consensus 234 PFl~~~~l~qvl~RLFPf~RGL~haywA~Nf 264 (336)
||+. ..-.|.+++=|-++|--.| +|-.|+
T Consensus 231 PFLl-~~p~~Yl~~aFDlGR~F~~-kWtVNw 259 (429)
T KOG2762|consen 231 PFLL-YFPSSYLTQAFDLGRVFMY-KWTVNW 259 (429)
T ss_pred chHh-hChHHHHhhhcccccceeE-Eeeeee
Confidence 9985 4456688888999996544 577674
No 15
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=96.42 E-value=0.067 Score=56.50 Aligned_cols=156 Identities=15% Similarity=0.166 Sum_probs=93.0
Q ss_pred cCCCcccCCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhcc--chhhHH
Q 019776 54 DETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA--DVKRRY 131 (336)
Q Consensus 54 ~~ts~WtLDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~--~~~~~~ 131 (336)
++..|+ |-||+.-|.-.+.-++ +.. +-.-.|+...++=++....++.+.++. +++...
T Consensus 55 ~g~~y~--eKPPL~yWl~Als~~L---FG~---------------~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~Al 114 (552)
T PRK13279 55 LGLRYF--EKPIAGYWINSIGQWL---FGD---------------NNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTAL 114 (552)
T ss_pred CCCcCC--CCCcHHHHHHHHHHHH---cCC---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 343444 9999999877765544 111 224589999998888888888888776 233445
Q ss_pred HHHHHHHHccceeeeeccchhhhhHHHHHHHHHH---HHHHc----C-C---chHHHHHHHHHhhhhhhhHHHHHHH--H
Q 019776 132 LIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSI---SFLQE----G-K---DLMGGFLFAVLLCFKHLFAVAAPVY--F 198 (336)
Q Consensus 132 ~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi---~~l~~----~-r---~ll~a~~FalaL~fKhm~LY~APa~--F 198 (336)
.++++++.+|++....|.+ .-+..+..+..+|+ +...+ + + .++.|+..++++..|-......|.. +
T Consensus 115 lAaLIlls~~~v~~~g~~a-~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~LTKG~ial~lP~l~il 193 (552)
T PRK13279 115 LAALIYLSLFLVYGIGTYA-VLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFMTKGFLALAVPVISVL 193 (552)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 5566667788777654443 12344444444443 33322 1 1 3456777888999998666666633 3
Q ss_pred HHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 019776 199 VYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (336)
Q Consensus 199 vyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~PFl~ 237 (336)
.+++.+ ++++++...+...++++++..+|+..
T Consensus 194 ~~ll~~-------rr~~~ll~~~~l~llvalli~lPW~l 225 (552)
T PRK13279 194 PWVIWQ-------KRWKELLIYGPLAVLSAVLVSLPWAL 225 (552)
T ss_pred HHHHHh-------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344332 24555555554455556666677764
No 16
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.02 Score=56.94 Aligned_cols=133 Identities=14% Similarity=0.189 Sum_probs=97.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHH--hccchhhHHHHHHHHHHccceeeee-ccchhhhhHHHHHHHHHHHHHHcCCchHHHH
Q 019776 102 FLRISVILSDLWLLYGVYRLT--KNADVKRRYLIWVLIVWSPALVMVD-HLHFQYNGFLLGWLLLSISFLQEGKDLMGGF 178 (336)
Q Consensus 102 FmR~tVIvsDlll~~a~~~~~--~~~~~~~~~~~~~~~llnPgLiiiD-hiHFQYNg~llGllllSi~~l~~~r~ll~a~ 178 (336)
+-+.--..+|++...-.+++. |+.+++++.+....-++||-..+|. .|-- ++++-.+.++-++++.+++...||+
T Consensus 97 ~GK~Lf~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNa--esi~~~lvi~~lyllqK~~v~~A~l 174 (405)
T KOG3893|consen 97 WGKLLFAIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNA--ESIVAFLVILTLYLLQKSEVFLAGL 174 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCch--HHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 455666789999988777775 4556667777777788999998874 3444 8999999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHH------HHHHHHHHHHHHHHHhhhh
Q 019776 179 LFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRL------SVLGAVVVAVFAAAYGPFL 236 (336)
Q Consensus 179 ~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rl------i~Lg~~Vi~tfal~f~PFl 236 (336)
+..+++.+|--++.+.|+++.++...--.+.....+..+ +++.++.+.+|+++-.-|.
T Consensus 175 ~~GlaIh~KIYPliY~l~i~l~ls~~~~~s~~~~~l~sLL~~~k~l~~~~~tLtsf~~~~~~fY 238 (405)
T KOG3893|consen 175 AHGLAIHLKIYPLIYSLAIYLSLSTRKTQSTPLDKLCSLLSINKQLCLILGTLTSFAACTWTFY 238 (405)
T ss_pred HhhheeeeEechHHhhhhhheEEecCCCCCcHHHHHHHHhccccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999998885432111000012222 4445667777777733343
No 17
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=96.06 E-value=0.18 Score=53.85 Aligned_cols=153 Identities=22% Similarity=0.227 Sum_probs=87.7
Q ss_pred CCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccchh-hHHHHHHHHHHcc
Q 019776 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVK-RRYLIWVLIVWSP 141 (336)
Q Consensus 63 YPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~~-~~~~~~~~~llnP 141 (336)
||||+.|.-.+++.+.. |+ ..-..+.++++=++...+.|.+.|+..++ .+.+.++++++.|
T Consensus 4 YpPL~yyl~a~l~~l~g--~~----------------~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~~~~A~l~aiLyl~~p 65 (616)
T PF10131_consen 4 YPPLPYYLGALLSLLFG--NP----------------IVAYKLFIFLAFFLGGLGMYFLGRRLGRRKAAILAAILYLFSP 65 (616)
T ss_pred CCcHHHHHHHHHHHHhC--CH----------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHhH
Confidence 99999999999998841 11 12335566666555566778888777553 3455677888899
Q ss_pred ceeeeeccchhhhhH----HHHHHHHHHHHHHcCC---c-hHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhcccc
Q 019776 142 ALVMVDHLHFQYNGF----LLGWLLLSISFLQEGK---D-LMGGFLFAVLLCFKH--LFAVAAPVYFVYLLRHYCWKGLV 211 (336)
Q Consensus 142 gLiiiDhiHFQYNg~----llGllllSi~~l~~~r---~-ll~a~~FalaL~fKh--m~LY~APa~FvyLL~~~~~~~~~ 211 (336)
..+...+.+..+=.. ++=+++++...+.++| . +..|+.+++.+ +=| ..+....+.+++++-..-.++
T Consensus 66 y~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~~~~lAl~~all~-lsHll~~ll~~l~~~~~lLi~~~~~~-- 142 (616)
T PF10131_consen 66 YHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRYWILLALSMALLA-LSHLLSTLLTGLALIVFLLIYLIQRK-- 142 (616)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 988766666644333 2222334444444333 2 44566565443 336 667777777777763322211
Q ss_pred chhhHHHHHHHHHHHHH--HHHHhhhh
Q 019776 212 RGFSRLSVLGAVVVAVF--AAAYGPFL 236 (336)
Q Consensus 212 ~~~~rli~Lg~~Vi~tf--al~f~PFl 236 (336)
+....+.++..++++.. +.-+.|++
T Consensus 143 ~~~~~l~~~~a~~lgl~lsafwL~P~l 169 (616)
T PF10131_consen 143 RFKRNLIKLVAIVLGLLLSAFWLLPAL 169 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233434433333333 44566987
No 18
>PRK13375 pimE mannosyltransferase; Provisional
Probab=95.67 E-value=2.1 Score=43.96 Aligned_cols=187 Identities=21% Similarity=0.262 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHH---ccccc-CcchHHhhHHHHH-hccCCccccccc-CC--CcccCCCCchhHHHHHHhhhhcccc
Q 019776 10 LLWFFAIAVCVKLLL---IPAYH-STDFEVHRHWLAL-THSLPLSNWYAD-ET--SPWTLDYPPFFACFERFLSIFAHYI 81 (336)
Q Consensus 10 ~~w~~~~~~~lk~ll---~p~y~-stDfEvhRnWmai-T~~LPls~WY~~-~t--s~WtLDYPPlfAy~e~llg~ia~~~ 81 (336)
..|+++++.+.+..- .|..+ .-|+||-|.=-+. .+.-++-+.=+. .+ ..-.--||||+|-...=++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~vDl~VYr~g~~~~~~g~~LYd~~~~~~~~~~~LpFtYPPfaallf~PLalL---- 95 (409)
T PRK13375 20 APLLLVLSVAARLAWTYLAPNGANFVDLHVYVGGAAALDHPGTLYDYVYADQTPDFPLPFTYPPFAALVFYPLHLL---- 95 (409)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCCccHHHHHHhHHHHccCCcccCccccccCCCCCCCCCCCcHHHHHHHHHHhc----
Confidence 445777777777653 23333 3699997652211 123355554222 11 112247999999998888865
Q ss_pred CCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHH-hccchh---hHHHH--HHHHHHccceeeeecc-chhhh
Q 019776 82 DPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLT-KNADVK---RRYLI--WVLIVWSPALVMVDHL-HFQYN 154 (336)
Q Consensus 82 dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~-~~~~~~---~~~~~--~~~~llnPgLiiiDhi-HFQYN 154 (336)
+.. ..+....+.-+..++++.+.+ +..+.. .+... ....+..+.+- ++. +.|-|
T Consensus 96 p~~-----------------~a~~l~~~~~~~al~~~v~~~~r~l~~~~~~~~~a~~~~~~~l~~ePv~--~tl~~GQIN 156 (409)
T PRK13375 96 PFG-----------------VVAFLWQLATIAALYGVVRISQRLLGGGAGGHRVAMLWTAVGIWLEPVR--STFDYGQIN 156 (409)
T ss_pred cHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHhHHHH--HHHHhCcHH
Confidence 211 122222233333333333322 222111 12211 11222233332 333 45779
Q ss_pred hHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHh
Q 019776 155 GFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYG 233 (336)
Q Consensus 155 g~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~ 233 (336)
.++..+.++. +.++|...+|++..++-+.|..+..+. .|+|.+ |+++-+..-+.+.+++.++.+.
T Consensus 157 ~lL~~Lv~~d---ll~~r~~~aGvliGLAaaIKlTPavf~----l~lL~~-------RrWra~~~A~~t~~~~~~lg~~ 221 (409)
T PRK13375 157 VFLMLAVLYA---VYSSRWWLSGLLVGLAAGVKLTPAITG----LYFLGA-------RRWAAAAFSAVVFLATVGVSYL 221 (409)
T ss_pred HHHHHHHHHH---HhcCCccHHHHHHHHHHHhhhhhHHHH----HHHHHh-------CHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888765 347788889999999999999988743 334332 2566665555555544444433
No 19
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=95.58 E-value=0.04 Score=53.15 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=60.0
Q ss_pred hhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccc--cchh--hHHHHHHHHHHHHHH
Q 019776 154 NGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGL--VRGF--SRLSVLGAVVVAVFA 229 (336)
Q Consensus 154 Ng~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~--~~~~--~rli~Lg~~Vi~tfa 229 (336)
|+++--+.+++++++.++|...||+++++++++|-=++.++|++..|+.++...+.. ..++ ++-+++|.+.+++|+
T Consensus 8 Esl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~f~~~s~~tf~ 87 (259)
T PF05007_consen 8 ESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYLSNRKNGSFRSRLKRLLNPNRLKFGLISAITFA 87 (259)
T ss_pred HHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHHhccccchHHHHHHHhcCHhHhhhHHHHHHHHH
Confidence 677888899999999999999999999999999999999999999999665322100 0011 134556766666665
Q ss_pred HHHh
Q 019776 230 AAYG 233 (336)
Q Consensus 230 l~f~ 233 (336)
+.-+
T Consensus 88 ~l~~ 91 (259)
T PF05007_consen 88 ALTL 91 (259)
T ss_pred HHHH
Confidence 5443
No 20
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=94.12 E-value=0.97 Score=46.41 Aligned_cols=117 Identities=21% Similarity=0.241 Sum_probs=80.5
Q ss_pred HHHHhcc--chhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHH
Q 019776 119 YRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPV 196 (336)
Q Consensus 119 ~~~~~~~--~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa 196 (336)
+++.+.. +++.+...++++++||+=+.---.-= |+....+.+++++.+.+++...++++|+++-...--.+..+..
T Consensus 131 ~~l~~~~~~~~~~a~~a~ll~~~~PasiF~sa~Ys--Eslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~ 208 (443)
T PF04188_consen 131 YRLTRRVFKSRKLALLAALLFIFSPASIFLSAPYS--ESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGF 208 (443)
T ss_pred HHHHHHhccccHHHHHHHHHHHHccHHHHhhcCcc--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4444433 23334455677889999665443444 7888888899999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhccc-cchhhHHHHHHHHHHHHHHHHHhhhhh
Q 019776 197 YFVYLLRHYCWKGL-VRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (336)
Q Consensus 197 ~FvyLL~~~~~~~~-~~~~~rli~Lg~~Vi~tfal~f~PFl~ 237 (336)
+...+++.+...-. .+..++.++.-...+...+++.+||+.
T Consensus 209 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~i~~pf~~ 250 (443)
T PF04188_consen 209 FAYELLGIYYLDLRQLRRQRRLVRALISAILSGLLIFLPFVL 250 (443)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 88888887664211 012223333333344445567889885
No 21
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=94.04 E-value=0.66 Score=47.31 Aligned_cols=88 Identities=22% Similarity=0.239 Sum_probs=65.6
Q ss_pred HHHHHHhcc--chhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHH
Q 019776 117 GVYRLTKNA--DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAA 194 (336)
Q Consensus 117 a~~~~~~~~--~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~A 194 (336)
.+++++++. +++.....++.+++||++.=..-.-|.=+++..-+++++++++.++|.....++..++++.|--.-...
T Consensus 76 pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ll~llvKEd~~l~v 155 (449)
T PF09852_consen 76 PLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWALLLLLVKEDLGLTV 155 (449)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHhhHHHHH
Confidence 456666655 344556678889999999875333444499998999999999999999999999999999996555555
Q ss_pred HHHHHHHHHH
Q 019776 195 PVYFVYLLRH 204 (336)
Q Consensus 195 Pa~FvyLL~~ 204 (336)
-.+..+++-+
T Consensus 156 ~~~gl~~~~~ 165 (449)
T PF09852_consen 156 AGIGLYLLLR 165 (449)
T ss_pred HHHHHHHHHh
Confidence 5566666544
No 22
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=92.62 E-value=9.1 Score=39.42 Aligned_cols=95 Identities=17% Similarity=0.140 Sum_probs=58.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH-hccchhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHc----CC---
Q 019776 101 YFLRISVILSDLWLLYGVYRLT-KNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQE----GK--- 172 (336)
Q Consensus 101 ~FmR~tVIvsDlll~~a~~~~~-~~~~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~----~r--- 172 (336)
.-.|+...++=+++ ..++... +..+++...+.++++.++|..+..++.- .-|..+..+.+++++++.+ ++
T Consensus 71 ~a~RL~~aL~g~~v-~l~~~~~r~~~~~~~al~AAllla~sp~~~~~sr~~-~~D~~l~~f~~lal~~l~r~~~~~~~~~ 148 (439)
T TIGR03663 71 ATARLLPAVFGVLL-PLTAWLYRKRLGDNEVLWAAVLLAFSPVMVYYSRFM-RNDIFVAFFTLLAVGAAFRYLDTGKRRY 148 (439)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 46899665544553 3333333 3345555555667778899997654432 2345666666666665432 22
Q ss_pred chHHHHHHHHHhhhhhhhHHHHHHH
Q 019776 173 DLMGGFLFAVLLCFKHLFAVAAPVY 197 (336)
Q Consensus 173 ~ll~a~~FalaL~fKhm~LY~APa~ 197 (336)
.+.+++.+++++..|...+.+.+.+
T Consensus 149 ~~lag~~~gLa~ltKg~~~l~~~~~ 173 (439)
T TIGR03663 149 LFLAASALALAFTSKENAYLIILIF 173 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999866655443
No 23
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=92.20 E-value=6.9 Score=40.55 Aligned_cols=97 Identities=22% Similarity=0.319 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHcccee------eeeccchhhhhHHHHHHHHHHHHH---HcC
Q 019776 102 FLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWSPALV------MVDHLHFQYNGFLLGWLLLSISFL---QEG 171 (336)
Q Consensus 102 FmR~tVIvsDlll~~a~~~~~~~~-~~~~~~~~~~~~llnPgLi------iiDhiHFQYNg~llGllllSi~~l---~~~ 171 (336)
++=+.++.+|+..+ .++..+|+. +++....+..+.++.|++. ..|+. .+.++.+++.+. .++
T Consensus 141 ~~llNil~~~~si~-liy~i~k~lf~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~-------~l~~~~l~l~~~~~~~~~ 212 (483)
T TIGR03766 141 FDVVNIVLVDLSAL-ILYKAVKKVFNKKKAFVALYLFVLLLALSPYILIPYTDTW-------VLPFVSLFLFLYTVISKK 212 (483)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHHHHHHhc
Confidence 45566667776553 334444443 3444444555667777753 24544 233333443322 221
Q ss_pred C--------chHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHh
Q 019776 172 K--------DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYC 206 (336)
Q Consensus 172 r--------~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~ 206 (336)
+ .+.+|++.+++-.+|...+.+.+|.+++++-...
T Consensus 213 ~~~~~~~~~~Il~gillal~~~iKp~~iI~liA~~i~~~l~~~ 255 (483)
T TIGR03766 213 TDLRKKIALSILLGVLLAIAYFIKPSAIIFVIAIFIVLFLQLL 255 (483)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 1 2578999999999999999999999999877544
No 24
>PF14897 EpsG: EpsG family
Probab=91.99 E-value=3.1 Score=39.01 Aligned_cols=141 Identities=16% Similarity=0.225 Sum_probs=81.4
Q ss_pred CcchHHhhHHHHHhccCCcccccccCCCcccCCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHH
Q 019776 30 STDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVIL 109 (336)
Q Consensus 30 stDfEvhRnWmaiT~~LPls~WY~~~ts~WtLDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIv 109 (336)
.+|+|...+..+--.+.... .++ .++-|.+.+..++.+.+.. |++ ..+ .+
T Consensus 22 g~D~~~Y~~~y~~~~~~~~~---~~~-----~~~E~~~~~l~~~~~~~~~--~~~-----------------~~~---~i 71 (330)
T PF14897_consen 22 GTDYYNYYEIYDEISNNSFN---FSE-----YGFEPGFYLLNYLFSYFGF--NYQ-----------------FFF---FI 71 (330)
T ss_pred CccHHHHHHHHHHHhccccc---ccc-----ccCCHHHHHHHHHHHHHCC--CHH-----------------HHH---HH
Confidence 46999998887654443322 222 4677899888888887621 111 111 12
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhh
Q 019776 110 SDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHL 189 (336)
Q Consensus 110 sDlll~~a~~~~~~~~~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm 189 (336)
.-++.........++..++.......++.+.+... .......=+++..++.++|+..+.++|...+-++..++..+-.-
T Consensus 72 ~~~i~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~S 150 (330)
T PF14897_consen 72 ISFISLFLFFFFIKKYSKNYPIFLSLFLFFSFFFF-FYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYS 150 (330)
T ss_pred HHHHHHHHHHHhHHHcccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 22233333344444443332222222222233322 23344445788888899999999988888877777778888777
Q ss_pred hHHHHHHHHHHH
Q 019776 190 FAVAAPVYFVYL 201 (336)
Q Consensus 190 ~LY~APa~FvyL 201 (336)
.+...|.++..-
T Consensus 151 aii~l~~~~l~~ 162 (330)
T PF14897_consen 151 AIIFLPLYFLSR 162 (330)
T ss_pred HHHHHHHHHHHH
Confidence 777777754443
No 25
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=88.05 E-value=8.7 Score=37.90 Aligned_cols=120 Identities=18% Similarity=0.292 Sum_probs=75.4
Q ss_pred CCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHccc
Q 019776 63 YPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVWSPA 142 (336)
Q Consensus 63 YPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~~~~~~~~~~~llnPg 142 (336)
|||+.=-.+-+-=.+|+.++.+. ......+|+...+.-.++.+.+.+..++. + .+.+.+.+.|-
T Consensus 95 y~p~~Ylp~alGi~ig~ll~l~~-----------~~~~~l~Rl~nll~~~~l~~~Ai~~~p~~----k-~l~~~i~l~Pm 158 (389)
T PF09913_consen 95 YPPLYYLPQALGIWIGRLLGLSV-----------LVMYYLGRLFNLLLYALLVYLAIKLAPRG----K-WLLALIALLPM 158 (389)
T ss_pred CCcHhhHHHHHHHHHHHHhCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHHcchh----H-HHHHHHHHHHH
Confidence 89876444444335566666542 23567899999888888877665555321 2 33566677786
Q ss_pred eeeeeccchhhhhHHHHHHHHHHHHHHc----CC-----chHHHHHHHHHhhhhhhhHHHHHHHHH
Q 019776 143 LVMVDHLHFQYNGFLLGWLLLSISFLQE----GK-----DLMGGFLFAVLLCFKHLFAVAAPVYFV 199 (336)
Q Consensus 143 LiiiDhiHFQYNg~llGllllSi~~l~~----~r-----~ll~a~~FalaL~fKhm~LY~APa~Fv 199 (336)
.+-. -.-+.|+++..++..+.++.+.+ ++ .+..++...++..-|..++-.++..+.
T Consensus 159 ~~~~-~aS~s~D~~~~~~~~l~~a~~l~~~~~~~~~~~~~~~l~v~~~ll~~~K~~y~~l~~l~l~ 223 (389)
T PF09913_consen 159 TLFQ-AASVSYDGLIIALAFLFIALLLRLYRKKKITRRDLILLGVLAVLLALSKPPYIPLLLLLLL 223 (389)
T ss_pred HHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5542 35678999999998888876654 11 245666777778889444444444333
No 26
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=83.08 E-value=11 Score=41.18 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=92.7
Q ss_pred ccccccCCCcccCCCCchhHHHHHHhhhhccccCCceEEeccC--CCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 019776 49 SNWYADETSPWTLDYPPFFACFERFLSIFAHYIDPQIVDLHNG--LNYRANSAIYFLRISVILSDLWLLYGVYRLTKNAD 126 (336)
Q Consensus 49 s~WY~~~ts~WtLDYPPlfAy~e~llg~ia~~~dp~~l~l~~~--~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~~ 126 (336)
..=|.+++.|--+ +||+-++.--+-|.++.+ ||.+-.- .. ..|.....-..||...-+.-.+....++..+|.++
T Consensus 59 aS~Yl~~~~~fDv-HPPL~kml~al~~~L~g~-~g~f~f~-~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~ 135 (699)
T COG1928 59 ASYYLNGTPFFDV-HPPLGKMLIALVGGLEGY-DPPFDFQ-LIGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIG 135 (699)
T ss_pred hHHhhcCCccccc-CCcHHHHHHHhhhhhhcc-CCCcccc-cCCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 3345555555545 799999988887777663 4433221 22 23333345678999888777777777777788776
Q ss_pred hhhHHHHHHHHHHccceeeeeccchh------hhhHHHHHHHHHHHHHHc---CC---------chHHHHHHHHHhhhhh
Q 019776 127 VKRRYLIWVLIVWSPALVMVDHLHFQ------YNGFLLGWLLLSISFLQE---GK---------DLMGGFLFAVLLCFKH 188 (336)
Q Consensus 127 ~~~~~~~~~~~llnPgLiiiDhiHFQ------YNg~llGllllSi~~l~~---~r---------~ll~a~~FalaL~fKh 188 (336)
.+....+.+ -.++++||.|.- -|++++-+.+.+++++.+ .+ -++.|+..++++..|-
T Consensus 136 ~s~l~~~l~-----~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGcaiS~Kw 210 (699)
T COG1928 136 YSRLVAALA-----GLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGCAISVKW 210 (699)
T ss_pred chHHHHHHH-----HHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeeeEEEeee
Confidence 554332211 123346777753 377888888888887642 11 2457888899999999
Q ss_pred hhHHHHHHHHHHHHH
Q 019776 189 LFAVAAPVYFVYLLR 203 (336)
Q Consensus 189 m~LY~APa~FvyLL~ 203 (336)
..+...-....+-..
T Consensus 211 vGlft~~~vgl~~v~ 225 (699)
T COG1928 211 VGLFTTGVVGLLAVY 225 (699)
T ss_pred hhHHHHHHHHHHHHH
Confidence 987766555444433
No 27
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=81.50 E-value=54 Score=32.81 Aligned_cols=102 Identities=22% Similarity=0.189 Sum_probs=54.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhc-cchhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHc--------
Q 019776 100 IYFLRISVILSDLWLLYGVYRLTKN-ADVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQE-------- 170 (336)
Q Consensus 100 v~FmR~tVIvsDlll~~a~~~~~~~-~~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~-------- 170 (336)
....|+.--+.=.+.-+..++..++ .+++.+....++.+.++..... ..+.==|++-..++++|++...+
T Consensus 81 ~~~~Rl~~~~~s~~~d~~~~~~~~~~~~~~~a~~~l~l~~~s~~~~~~-~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~ 159 (418)
T PF03901_consen 81 FYAPRLVLALLSALSDYYLYRLVKRLFGSSVALWALLLSLFSWFMFYY-SSRTLSNSFETILVLLALYLWLRSLSRSNSS 159 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhhHHHhhhHHHHh-hcccCccHHHHHHHHHHHHHHHHhhccCCCc
Confidence 4456665433333333344443332 2444344445556667765542 23333499999999999998875
Q ss_pred ---CCc-hHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 019776 171 ---GKD-LMGGFLFAVLLCFKHLFAVAAPVYFVYLL 202 (336)
Q Consensus 171 ---~r~-ll~a~~FalaL~fKhm~LY~APa~FvyLL 202 (336)
++. ...+++-+.++.+....+-+.-+...+.+
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~l 195 (418)
T PF03901_consen 160 SSSKRYLLAIGLLAGLAVFFRPTSALFWLPLGLYLL 195 (418)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 34445555556666555444444444444
No 28
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=79.07 E-value=41 Score=37.11 Aligned_cols=110 Identities=23% Similarity=0.302 Sum_probs=66.1
Q ss_pred ccc--CCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHH----HHHHHHHHhcc-chhhH
Q 019776 58 PWT--LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWL----LYGVYRLTKNA-DVKRR 130 (336)
Q Consensus 58 ~Wt--LDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll----~~a~~~~~~~~-~~~~~ 130 (336)
.|| .||||++-|.--+.+.+-+.+.|.. .+..++..+.++ ++++|...|+. +++..
T Consensus 80 P~G~~i~~~pl~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~PailG~L~vI~vYl~~r~i~~~~~g 142 (773)
T COG1287 80 PPGSPIDFPPLFLYLTAALGLILGSIFPVS-----------------LETAALLFPAILGVLTVIPVYLLGRRILGDKTG 142 (773)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHccCchH-----------------HHHHHHHhhHHHhhHHHHHHHHHHHHHhcchhh
Confidence 577 9999999999888888766666621 233344444443 44667777776 45556
Q ss_pred HHHHHHHHHccceee------eeccchhhhhHHHHHHHHHHHHHHc-----CCchHHHHHHHHHhhh
Q 019776 131 YLIWVLIVWSPALVM------VDHLHFQYNGFLLGWLLLSISFLQE-----GKDLMGGFLFAVLLCF 186 (336)
Q Consensus 131 ~~~~~~~llnPgLii------iDhiHFQYNg~llGllllSi~~l~~-----~r~ll~a~~FalaL~f 186 (336)
..+++++.+.|+.+- -||-=+ |-+..-+.++.+....+ +|...-+++.++++..
T Consensus 143 ~~aa~ll~~~p~~~~rt~~G~~d~~~~--~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l 207 (773)
T COG1287 143 LLAALLLALAPGYLSRTVAGFYDTDMF--ELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGL 207 (773)
T ss_pred HHHHHHHHHhhHHHHHhhcCccCCCch--HHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHH
Confidence 667788888999332 366554 55554444444443332 3555555554444443
No 29
>COG3463 Predicted membrane protein [Function unknown]
Probab=71.26 E-value=1.2e+02 Score=31.87 Aligned_cols=148 Identities=16% Similarity=0.167 Sum_probs=88.8
Q ss_pred HHHHHhcc--chhhHHHHHHHHHHccceeeeec--cchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHH
Q 019776 118 VYRLTKNA--DVKRRYLIWVLIVWSPALVMVDH--LHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVA 193 (336)
Q Consensus 118 ~~~~~~~~--~~~~~~~~~~~~llnPgLiiiDh--iHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~ 193 (336)
++.+++.. +++.+.+.+.++++||.+.=+-- -|. ..+.--++++|.+++++|++.+..+.-.+.+..|-+....
T Consensus 105 ~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~--m~~avp~~~~a~~f~~r~k~~l~li~lvlIl~tk~~a~li 182 (458)
T COG3463 105 IYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHP--MAFAVPLFLLAYYFLKRKKWKLFLIFLVLILLTKEDAFLI 182 (458)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcch--HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcccHHH
Confidence 34455543 35566777899999998764422 455 7777788999999999999999999999999999985544
Q ss_pred HHHHHHHHHHHHhhc----cccc---h-hhHHHHHHHHHHHHHHHHHhhhhh-hhhh--hhhhhhhccCCCccchhhhcc
Q 019776 194 APVYFVYLLRHYCWK----GLVR---G-FSRLSVLGAVVVAVFAAAYGPFLY-HGQI--QQVFNRMFPFGRGLCHAYWAP 262 (336)
Q Consensus 194 APa~FvyLL~~~~~~----~~~~---~-~~rli~Lg~~Vi~tfal~f~PFl~-~~~l--~qvl~RLFPf~RGL~haywA~ 262 (336)
+--+-+.+.-+--.. +..+ + ..-+..++++.+....-...|.+. .+-+ +-+++-.|+=.-+++.-.-..
T Consensus 183 iIsl~i~~~~~~~~~~~~~~~ir~~~k~ii~f~~~~~~~~~~~ikviI~~i~~~~yly~~~~~~~~it~~~l~y~~~f~~ 262 (458)
T COG3463 183 IISLLIWLRLRNEGNPNTVKIIRKNAKLIIPFFALSMAYIILSIKVIIPLIGLVGYLYPSLYLKSSITRRKLLYITLFLA 262 (458)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhHHHhcccceecchHhhhhhhcccchhHHHHHHH
Confidence 444444433221110 0000 0 011334444554444555566654 2211 123333444455778888788
Q ss_pred hhHHH
Q 019776 263 NFWVF 267 (336)
Q Consensus 263 NfWal 267 (336)
|||-+
T Consensus 263 ~f~fL 267 (458)
T COG3463 263 PFAFL 267 (458)
T ss_pred HHHHH
Confidence 88543
No 30
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=67.47 E-value=49 Score=33.41 Aligned_cols=91 Identities=22% Similarity=0.315 Sum_probs=45.1
Q ss_pred CCCCchhHHHHHHhhhhccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHH
Q 019776 61 LDYPPFFACFERFLSIFAHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVW 139 (336)
Q Consensus 61 LDYPPlfAy~e~llg~ia~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~-~~~~~~~~~~~~ll 139 (336)
.||||++.+.......+.....+ ..+ .. ...=++.+++=+.. .+++.+.|+. +++...+.++++.+
T Consensus 68 i~~~pl~~~l~~~~~~~~~~~~~--~~l---------~~-v~~~~ppvl~~L~v-i~~y~~~~~~~~~~~Gl~aA~l~a~ 134 (483)
T PF02516_consen 68 IDWPPLFPYLTAAFYAILGGFGP--VSL---------YE-VAFWLPPVLGALTV-IPVYLLGRRLGGRKAGLLAAFLLAI 134 (483)
T ss_dssp --TT-HHHHHHHHHHHS-SS-HH---------------H-HHHHHHHHHGGGGH-HHHHHHHHHTT-HHHHHHHHHHHTT
T ss_pred cCcccHHHHHHHHHHHHHHHhcc--hhH---------HH-HHHHHHHHHHHHHH-HHHHHHHHHhCCCchHHHHHHHHHH
Confidence 68999999985555544333222 111 11 12233444443333 3455556666 34445666788888
Q ss_pred ccceee------eeccchhhhhHHHHHHHHHHH
Q 019776 140 SPALVM------VDHLHFQYNGFLLGWLLLSIS 166 (336)
Q Consensus 140 nPgLii------iDhiHFQYNg~llGllllSi~ 166 (336)
.||.+. .||-=+ |-++..+.++...
T Consensus 135 ~p~~l~RT~~G~~D~~~~--~~~f~~l~~~~~~ 165 (483)
T PF02516_consen 135 SPGYLSRTMAGFYDHHML--ELFFPLLIIYFFL 165 (483)
T ss_dssp SHHHHHTSSTT--SGGGG--TTHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCcccchH--HHHHHHHHHHHHH
Confidence 999544 577666 5555444444444
No 31
>PF14264 Glucos_trans_II: Glucosyl transferase GtrII
Probab=64.86 E-value=1.2e+02 Score=28.99 Aligned_cols=97 Identities=23% Similarity=0.311 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHhccchhh---HHHHHHHHHHccceeeeeccchhhhhH--HHHHHHHHHHH--HHcCC--chHHHHH
Q 019776 109 LSDLWLLYGVYRLTKNADVKR---RYLIWVLIVWSPALVMVDHLHFQYNGF--LLGWLLLSISF--LQEGK--DLMGGFL 179 (336)
Q Consensus 109 vsDlll~~a~~~~~~~~~~~~---~~~~~~~~llnPgLiiiDhiHFQYNg~--llGllllSi~~--l~~~r--~ll~a~~ 179 (336)
++=+++..+...+++..+.++ ..+....++.||-.+ ++.-|+|++. ++|+++..+.. ..+++ .+.|+++
T Consensus 55 Ls~~~la~s~~~~~~~~~~~~~~~~~l~~~~~~~~P~~~--~~lsy~~~s~~~~ls~~l~~la~~~~~k~~~~~~~~~~l 132 (319)
T PF14264_consen 55 LSILFLALSAVLLVRLFDIKSSFISVLFSLLFISSPFFL--ENLSYRFDSLPMALSLLLAVLAFYFLKKSKIGFLISILL 132 (319)
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhHHHH--HHHHHHHccHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 343444444455555543333 234566777899876 7777777754 55555444444 33333 2457888
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHH-HHHhh
Q 019776 180 FAVLLCFKHLFAVAAPVYFVYLL-RHYCW 207 (336)
Q Consensus 180 FalaL~fKhm~LY~APa~FvyLL-~~~~~ 207 (336)
-+++++.=|-+.-..+...+..+ ..+..
T Consensus 133 l~~sl~~YQa~~~v~i~l~~~~~l~~~~~ 161 (319)
T PF14264_consen 133 LVLSLGIYQASINVFISLVLIILLLDLLK 161 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889988888777766664443 44443
No 32
>PHA01514 O-antigen conversion protein C
Probab=64.51 E-value=2e+02 Score=30.56 Aligned_cols=159 Identities=13% Similarity=0.193 Sum_probs=84.1
Q ss_pred CCCcc-chhHHHHHHHH--HHHHHHHHcccccCcchHHhhHHHHHhccCCcccccccCCCcccCCCCchhHHHHHHhhhh
Q 019776 1 MESSS-STRQLLWFFAI--AVCVKLLLIPAYHSTDFEVHRHWLALTHSLPLSNWYADETSPWTLDYPPFFACFERFLSIF 77 (336)
Q Consensus 1 ~~~~~-~~~~~~w~~~~--~~~lk~ll~p~y~stDfEvhRnWmaiT~~LPls~WY~~~ts~WtLDYPPlfAy~e~llg~i 77 (336)
|+..+ ||+...+++++ ...+=+++...|+=.|.+. ++|.. ..| +-|==|+..+..++++-=
T Consensus 1 ~~~~~~d~~~~~~~l~~~liyi~PLlla~~~YiDD~~R-----si~G~---~gW--------~~~GRPlad~l~~~L~~g 64 (485)
T PHA01514 1 MKFNSNDRIFISIFLGLAIIYTFPLLTHQSFFVDDLGR-----SLYGG---LGW--------SGNGRPLSDFIFYIINFG 64 (485)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHcCCCcccccHhH-----HhcCc---CCh--------hhcCchHHHHHHHHHcCC
Confidence 44444 45554444333 3444566667777788775 33332 333 333447777777777521
Q ss_pred ccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHHHHHHHHHHhcc-chh--hHHHHHHHHHHccceeeeeccchhhh
Q 019776 78 AHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWLLYGVYRLTKNA-DVK--RRYLIWVLIVWSPALVMVDHLHFQYN 154 (336)
Q Consensus 78 a~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll~~a~~~~~~~~-~~~--~~~~~~~~~llnPgLiiiDhiHFQYN 154 (336)
.+..| + -=++.|++=+++..+...+.+.. +++ ...++.+.++.||=++ -|..++|+
T Consensus 65 ~~~~D-----i--------------~PLpliLs~~~ls~a~~~l~~~~f~~~~~~~~L~~~~l~~NPffL--qNLSYrfD 123 (485)
T PHA01514 65 TPIID-----A--------------SPLPLMLGIVILALALSCIREKLFGDDYITASLCFMMILANPFFI--ENLSYRYD 123 (485)
T ss_pred CCccc-----c--------------ccHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhCHHHH--hhhhhccC
Confidence 11122 1 11334454444444433332222 222 2233455667799766 89999999
Q ss_pred hHHHHHHHHHHH----HHHcCC---chHHHHHHHHHhhhhhhhHHHHHH
Q 019776 155 GFLLGWLLLSIS----FLQEGK---DLMGGFLFAVLLCFKHLFAVAAPV 196 (336)
Q Consensus 155 g~llGllllSi~----~l~~~r---~ll~a~~FalaL~fKhm~LY~APa 196 (336)
|...++.+.... +..+++ .+.++++=.+++|.=|-.+-.-..
T Consensus 124 sl~Malsv~lsi~~~~l~~~~~~~~~~~~~il~~~~l~lYQ~s~nIfi~ 172 (485)
T PHA01514 124 SLTMCMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAI 172 (485)
T ss_pred cHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 977776543332 223333 335555556678877777665544
No 33
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=54.72 E-value=3.4e+02 Score=30.27 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=85.2
Q ss_pred CCCchhHHHHHHhhhhccccCCceEEeccCC-CcCC-CcchhhhHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHH
Q 019776 62 DYPPFFACFERFLSIFAHYIDPQIVDLHNGL-NYRA-NSAIYFLRISVILSDLWLLYGVYRLTKNADVKRRYLIWVLIVW 139 (336)
Q Consensus 62 DYPPlfAy~e~llg~ia~~~dp~~l~l~~~~-~y~s-~~~v~FmR~tVIvsDlll~~a~~~~~~~~~~~~~~~~~~~~ll 139 (336)
+.|||-.=.--+.|.++.+ |+++. . ++- ++.+ .--...||.---..--+..+.++...|.++.+...++ +
T Consensus 82 vHPPlgKmL~al~g~L~Gy-dG~f~-f-~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~y~t~~~~~~s~~aa~-----l 153 (723)
T KOG3359|consen 82 VHPPLGKMLIALVGYLAGY-DGSFD-F-QSIGEYYPNGVPYVGMRLFSALLGSLTVPLAYLTLKELGFSRLAAA-----L 153 (723)
T ss_pred cCchHHHHHHHHHHHHhCC-CCCcc-c-cCCCccCCCCCchHhHHHHHHHHHhHHHHHHHHHHHHhcccHHHHH-----H
Confidence 5799877766666666554 22221 1 222 2333 3455678887666666666667766666654432221 1
Q ss_pred ccceeeeeccchh------hhhHHHHHHHHHHHHHHc-----CC---------chHHHHHHHHHhhhhhhhHHHHHHHHH
Q 019776 140 SPALVMVDHLHFQ------YNGFLLGWLLLSISFLQE-----GK---------DLMGGFLFAVLLCFKHLFAVAAPVYFV 199 (336)
Q Consensus 140 nPgLiiiDhiHFQ------YNg~llGllllSi~~l~~-----~r---------~ll~a~~FalaL~fKhm~LY~APa~Fv 199 (336)
.-.++++||.|=- -+++++-+...+++++.+ ++ -++.|+.-++++..|-+++..--..+.
T Consensus 154 ~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLgcaiSvK~vGlft~~~Vgl 233 (723)
T KOG3359|consen 154 AALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLGCAISVKYVGLFTIALVGL 233 (723)
T ss_pred HHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhhheeehhhhhHHHHHHHHH
Confidence 2223446777642 278888888888887653 22 245788899999999999998877777
Q ss_pred HHHHH
Q 019776 200 YLLRH 204 (336)
Q Consensus 200 yLL~~ 204 (336)
+..++
T Consensus 234 ~~v~~ 238 (723)
T KOG3359|consen 234 YTVRE 238 (723)
T ss_pred HHHHH
Confidence 76665
No 34
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=43.02 E-value=2.6e+02 Score=25.50 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=46.1
Q ss_pred eeccchh--------hhhHHHHHHHHHHHHHHcC-------Cc-hHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 019776 146 VDHLHFQ--------YNGFLLGWLLLSISFLQEG-------KD-LMGGFLFAVLLCFKHLFAVAAPVYFVYLLRH 204 (336)
Q Consensus 146 iDhiHFQ--------YNg~llGllllSi~~l~~~-------r~-ll~a~~FalaL~fKhm~LY~APa~FvyLL~~ 204 (336)
.|..+|| -|.++.+++++.+....++ |+ +++|++..++++.-++.++..|+....+..+
T Consensus 95 S~sfW~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~~~~~~ 169 (178)
T PF11028_consen 95 SDSFWFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPAIALLYFFK 169 (178)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677776 5778888888888876654 33 5688999999999999999999988765443
No 35
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=40.68 E-value=1.1e+02 Score=32.05 Aligned_cols=131 Identities=16% Similarity=0.220 Sum_probs=84.9
Q ss_pred hhhHHHHHHHHHHccceeeeeccchhhhhHHHHHHHHHHHHHHcCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHh
Q 019776 127 VKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGWLLLSISFLQEGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYC 206 (336)
Q Consensus 127 ~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGllllSi~~l~~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~ 206 (336)
.+.+.-+++++.+||+=|.-..+== |++..-+.+.+++.+.+++..-|+.+|+++=+..-+.+.-++-+-.-..+...
T Consensus 154 ~k~s~~a~liFcfnPAsIF~ts~YS--EsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~F 231 (444)
T KOG2647|consen 154 PKISFYAALLFCFNPASIFLTAGYS--ESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGFF 231 (444)
T ss_pred hhHHhhhhheeEecchHhhhhHHhh--HHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhcceee
Confidence 3445555777889999887665555 88888889999999999998899999999988888888777644322222211
Q ss_pred hcc--ccchhhHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCCccchhhhcchhHH
Q 019776 207 WKG--LVRGFSRLSVLGAVVVAVFAAAYGPFLYHGQIQQVFNRMFPFGRGLCHAYWAPNFWV 266 (336)
Q Consensus 207 ~~~--~~~~~~rli~Lg~~Vi~tfal~f~PFl~~~~l~qvl~RLFPf~RGL~haywA~NfWa 266 (336)
..+ ..++-+++.+.-+.-....+...+||.. .+-..-++|=-.|+= |-+.=||
T Consensus 232 ~~~L~~~~r~~~~~~~i~~~~l~~l~~~~p~~~---~qyy~y~~fC~~~~~----~e~spwC 286 (444)
T KOG2647|consen 232 IFSLTMLNRLRQLFKQIVSLFLSILTFLLPLAA---FQYYGYKLFCPPRTA----WEKSPWC 286 (444)
T ss_pred eeehHhhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHhHHHHhCCCCCc----cccCccc
Confidence 101 1113345555555555667778889964 344455666444443 4445566
No 36
>COG5305 Predicted membrane protein [Function unknown]
Probab=39.41 E-value=5.3e+02 Score=27.92 Aligned_cols=169 Identities=19% Similarity=0.125 Sum_probs=93.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHccceeeeeccchhhhhHHHHH----HHHHHHHHH---
Q 019776 98 SAIYFLRISVILSDLWLLYGVYRLTKNA-DVKRRYLIWVLIVWSPALVMVDHLHFQYNGFLLGW----LLLSISFLQ--- 169 (336)
Q Consensus 98 ~~v~FmR~tVIvsDlll~~a~~~~~~~~-~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~llGl----lllSi~~l~--- 169 (336)
++.+.+|...-+.-.+.+..++.++|.+ +++....++.+...+|= |+|.-.|.=+..+ .++|..++.
T Consensus 114 ~s~~~~Rsls~L~~~~ai~~~y~l~r~l~~~~~a~la~~~~AisP~-----~i~~~qe~R~y~L~~~~~lis~~~Ll~ai 188 (552)
T COG5305 114 NSLLASRSLSALLSALAIPLVYWLGRELFGSTTALLAAALMAISPF-----HIFYSQEARSYALAVATTLISATLLLRAI 188 (552)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHccChH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4677899955555555566777777765 44444455666667774 3444445444433 344444432
Q ss_pred ----cCC----chHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHhhhhh---h
Q 019776 170 ----EGK----DLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKGLVRGFSRLSVLGAVVVAVFAAAYGPFLY---H 238 (336)
Q Consensus 170 ----~~r----~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~~~~~~~rli~Lg~~Vi~tfal~f~PFl~---~ 238 (336)
.+| .+.-++.-.+++..=--+.|.+.+.++++.- |.+.+.++-.++.+....+.+.+++. +||+. .
T Consensus 189 ~~~~~r~~l~~wliy~~~~~lsllt~~f~~~~v~A~~~~v~l--~~~~~~~~~~~l~~~l~~~~~~~~a~-lpwl~v~~~ 265 (552)
T COG5305 189 RLPTSRKLLPGWLIYALLLILSLLTHYFFALTVIAHGVYVLL--WASLKNRQSLFLIWWLLATAAGLLAF-LPWLLVYFA 265 (552)
T ss_pred cCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 344 4444555555555555677888888888866 43322221111444444444444443 67764 2
Q ss_pred hhhhhhhhhhccCCCccchhhhcch-hHHHHHHHHHHHHH
Q 019776 239 GQIQQVFNRMFPFGRGLCHAYWAPN-FWVFYIILDKVFSF 277 (336)
Q Consensus 239 ~~l~qvl~RLFPf~RGL~haywA~N-fWaly~~~dk~l~~ 277 (336)
.+.+-.+.+++ -.||-.+++ .| .+.+++..-.....
T Consensus 266 ~~~r~~~~~~i-~~~~~~~~~--~~~i~p~~~~~l~~~~~ 302 (552)
T COG5305 266 NSFRVGIPDLI-TLDGIVGQL--INPIYPLIAAWLLAFSL 302 (552)
T ss_pred Hhhccccccce-eehhhhccc--ccchHHHHHHHHHHHHH
Confidence 33333356666 788888888 47 67666665544433
No 37
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=32.49 E-value=7e+02 Score=27.30 Aligned_cols=184 Identities=18% Similarity=0.214 Sum_probs=96.4
Q ss_pred cCcchHHh--------hHHHHHhccCCcccccccCCCcccCCCCchhHHHH-----HHhhhhccccCCceEEeccCCCcC
Q 019776 29 HSTDFEVH--------RHWLALTHSLPLSNWYADETSPWTLDYPPFFACFE-----RFLSIFAHYIDPQIVDLHNGLNYR 95 (336)
Q Consensus 29 ~stDfEvh--------RnWmaiT~~LPls~WY~~~ts~WtLDYPPlfAy~e-----~llg~ia~~~dp~~l~l~~~~~y~ 95 (336)
..+|...| ||++. ..+.|.-.|...- |-|..+.++|.. ++.. .+..+
T Consensus 27 ~~~D~~~Q~~~f~~~l~~~l~-~~~~~~~s~~~gl----G~~~~~~~~yY~~sPf~ll~~----lfp~~----------- 86 (843)
T PF09586_consen 27 LSGDGNSQYIPFYEYLRDWLL-GGGSPFYSWSNGL----GGDFFGTFSYYLGSPFNLLSL----LFPAS----------- 86 (843)
T ss_pred EeccCHHHHHHHHHHHHHHHh-cCCCCcccccccC----CcchHhHHHHHhcCHHHHHHH----Hcchh-----------
Confidence 35798887 88886 5666877775533 456666655521 2111 11111
Q ss_pred CCcchhhhHHHHHHHHHHH-HHHHHHHHhccch----hhHHHHHHHHHHccceee-eeccchhhhhH-HHHHHHHHHHHH
Q 019776 96 ANSAIYFLRISVILSDLWL-LYGVYRLTKNADV----KRRYLIWVLIVWSPALVM-VDHLHFQYNGF-LLGWLLLSISFL 168 (336)
Q Consensus 96 s~~~v~FmR~tVIvsDlll-~~a~~~~~~~~~~----~~~~~~~~~~llnPgLii-iDhiHFQYNg~-llGllllSi~~l 168 (336)
..-..-..+++.-+.+ ..+.+.++|+..+ ..+.+.++++.++=-++. .=|.+| -|++ ++=++++++-.+
T Consensus 87 ---~~~~~~~~~~~lk~~lag~~~~~~l~~~~~~~~~~~~~i~s~~Yafsg~~~~~~~~~~f-ld~~i~lPL~llgie~~ 162 (843)
T PF09586_consen 87 ---QMPYAILLLIILKIGLAGLFFYLYLRKFKKSRSDWAALIGSLLYAFSGYVIYYSFNIMF-LDAMILLPLLLLGIERL 162 (843)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHH
Confidence 1111222223333333 2344566666533 334455666666633333 123444 3444 556677777754
Q ss_pred H-cCCch--HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhcc---ccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 019776 169 Q-EGKDL--MGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYCWKG---LVRGFSRLSVLGAVVVAVFAAAYGPFLY 237 (336)
Q Consensus 169 ~-~~r~l--l~a~~FalaL~fKhm~LY~APa~FvyLL~~~~~~~---~~~~~~rli~Lg~~Vi~tfal~f~PFl~ 237 (336)
. ++|.. ..++..++..|+ -++.+.+...++|.+-+++..+ ..+.+.|++.-++..++..++.++|.+.
T Consensus 163 ~~~~k~~~~~~~~~l~~i~nf-Yf~ym~~if~~iY~~~r~~~~~~k~~~~~~~~~~~~~ilg~~lsa~~llP~~~ 236 (843)
T PF09586_consen 163 LKEKKWWLFIISLALALISNF-YFAYMICIFLVIYFLIRYFFKNWKNFFKKILRFIGSSILGVGLSAFLLLPTIL 236 (843)
T ss_pred HhcCCcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 44442 233444444444 2334455666667766665221 1124566666777777888889999984
No 38
>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.36 E-value=6.7e+02 Score=27.04 Aligned_cols=170 Identities=16% Similarity=0.256 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHccccc-------CcchHHhhHHHHHhccCCccc-ccccCCCcccCCCCchhHHHHHHh-------h-hh
Q 019776 14 FAIAVCVKLLLIPAYH-------STDFEVHRHWLALTHSLPLSN-WYADETSPWTLDYPPFFACFERFL-------S-IF 77 (336)
Q Consensus 14 ~~~~~~lk~ll~p~y~-------stDfEvhRnWmaiT~~LPls~-WY~~~ts~WtLDYPPlfAy~e~ll-------g-~i 77 (336)
...++++|+++.-.|. +.==|+..-|= |+.- -|=++-+-| .|-|=+|-=||+. | -.
T Consensus 12 ~s~~~~Fk~lls~Rl~sA~~~iI~DCDEvfNYWE------PLHyllyG~GfQTW--EYSP~yaiRSy~Yillh~~pg~~~ 83 (568)
T KOG2515|consen 12 VSFSTAFKLLLSLRLCSATFSIISDCDEVFNYWE------PLHYLLYGEGFQTW--EYSPEYAIRSYAYILLHYVPGYFV 83 (568)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhhhcchhhhhcch------hhhhHhhcccccce--eeCchhHHHHHHHHHHHHcchHHH
Confidence 3445666666543332 22236666553 3332 244566767 9999988766653 2 34
Q ss_pred ccccCCceEEeccCCCcCCCcchhhhHHHHHHHHHHH-HHHHHHHHhccchhhHHHHHHHHHHccceeeeeccchhhhhH
Q 019776 78 AHYIDPQIVDLHNGLNYRANSAIYFLRISVILSDLWL-LYGVYRLTKNADVKRRYLIWVLIVWSPALVMVDHLHFQYNGF 156 (336)
Q Consensus 78 a~~~dp~~l~l~~~~~y~s~~~v~FmR~tVIvsDlll-~~a~~~~~~~~~~~~~~~~~~~~llnPgLiiiDhiHFQYNg~ 156 (336)
|+.++++-+.+ -.+.|+..=..-.+. .+.....||+.+........++.++|+|-.. ...-|==-+|
T Consensus 84 a~~fg~~ki~v-----------Fy~vR~~Lg~fsai~E~~l~~ai~~kf~~~ia~~~i~f~~fssGmF~-aStafLPSSF 151 (568)
T KOG2515|consen 84 AKLFGLSKILV-----------FYFVRLCLGFFSAIMETYLYKAICRKFGLAIARIWIIFLLFSSGMFH-ASTAFLPSSF 151 (568)
T ss_pred HHhcCCCceEe-----------ehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccee-eechhcchHH
Confidence 55566664444 345687654333333 5556667787777666666777889999886 4566777788
Q ss_pred HHHHHHHHHHHHHcCCchH--HHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 019776 157 LLGWLLLSISFLQEGKDLM--GGFLFAVLLCFKHLFAVAAPVYFVYLLR 203 (336)
Q Consensus 157 llGllllSi~~l~~~r~ll--~a~~FalaL~fKhm~LY~APa~FvyLL~ 203 (336)
..-+..+|..+...+|+.. +.+.++..|+--.-.+--.|...--++.
T Consensus 152 ~M~~~~~al~a~l~~n~~~av~~~a~gailGWPFsa~l~lPi~~~lll~ 200 (568)
T KOG2515|consen 152 AMYLTVLALGAWLTENYTKAVAYVAIGAILGWPFSALLGLPILLELLLL 200 (568)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccHHHHHHhhHHHHHHHHH
Confidence 8888888888777777653 4555666677777777777844444433
No 39
>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function.
Probab=27.38 E-value=33 Score=28.20 Aligned_cols=16 Identities=19% Similarity=0.515 Sum_probs=13.1
Q ss_pred cCcchHHhhHHHHHhc
Q 019776 29 HSTDFEVHRHWLALTH 44 (336)
Q Consensus 29 ~stDfEvhRnWmaiT~ 44 (336)
+-+|++.||+||--+.
T Consensus 64 r~~~i~~Hr~wM~rsy 79 (103)
T PF10067_consen 64 RRGRIAAHRRWMIRSY 79 (103)
T ss_pred HhCCHHHHHHHHHHHH
Confidence 5699999999996543
No 40
>TIGR03063 srtB_target sortase B cell surface sorting signal. Two different classes of sorting signal, both analogous to the sortase A signal LPXTG, may be recognized by the sortase SrtB. These are given as NXZTN and NPKXZ. Proteins sorted by this class of sortase are less common than the sortase A and LPXTG system. This model describes a number of cell surface protein C-terminal regions from Gram-positive bacteria that appear to be sortase B (SrtB) sorting signals.
Probab=21.14 E-value=87 Score=20.80 Aligned_cols=17 Identities=18% Similarity=0.209 Sum_probs=10.7
Q ss_pred hhhHHHHHHHH--HHHHHH
Q 019776 188 HLFAVAAPVYF--VYLLRH 204 (336)
Q Consensus 188 hm~LY~APa~F--vyLL~~ 204 (336)
+|++|.+|... ++|+++
T Consensus 9 ~i~ly~~l~~~s~~~Li~k 27 (29)
T TIGR03063 9 QIGLYAVLFLGSGLFLIRK 27 (29)
T ss_pred hHHHHHHHHHHHHHHHhhc
Confidence 56777777665 555544
No 41
>PRK10649 hypothetical protein; Provisional
Probab=20.73 E-value=9.5e+02 Score=25.77 Aligned_cols=37 Identities=14% Similarity=0.028 Sum_probs=25.6
Q ss_pred cCCchHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHh
Q 019776 170 EGKDLMGGFLFAVLLCFKHLFAVAAPVYFVYLLRHYC 206 (336)
Q Consensus 170 ~~r~ll~a~~FalaL~fKhm~LY~APa~FvyLL~~~~ 206 (336)
+-+.--++=+++.-+..+...+-..|..+++++.+.+
T Consensus 106 eTn~~Ea~e~ls~~~~~~~~l~~~l~~l~~~~~~~r~ 142 (577)
T PRK10649 106 ETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRL 142 (577)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444456666777677888888888888877765533
Done!