Query 019778
Match_columns 336
No_of_seqs 123 out of 1143
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019778.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019778hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.2E-75 2.8E-79 537.9 29.3 299 12-324 2-309 (312)
2 1odm_A Isopenicillin N synthas 100.0 3.3E-71 1.1E-75 517.5 28.9 301 11-327 3-327 (331)
3 1gp6_A Leucoanthocyanidin diox 100.0 1.3E-70 4.5E-75 517.7 29.2 292 15-329 45-350 (356)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 9.5E-71 3.2E-75 511.1 19.3 282 15-325 2-294 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 3E-69 1E-73 499.9 14.3 280 15-326 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 7.7E-66 2.6E-70 470.1 25.3 265 15-324 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 93.0 0.14 4.9E-06 44.6 5.9 78 185-287 100-195 (243)
8 2rg4_A Uncharacterized protein 91.6 3.3 0.00011 35.1 12.7 42 236-289 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 91.4 1.3 4.5E-05 38.5 10.1 81 186-286 119-212 (247)
10 3i3q_A Alpha-ketoglutarate-dep 89.2 3 0.0001 35.3 10.3 82 185-286 106-202 (211)
11 3s57_A Alpha-ketoglutarate-dep 87.7 3.1 0.00011 35.0 9.3 84 186-285 102-201 (204)
12 3itq_A Prolyl 4-hydroxylase, a 85.2 3.4 0.00012 35.1 8.2 102 158-287 95-212 (216)
13 2iuw_A Alkylated repair protei 83.8 3.6 0.00012 35.5 7.9 87 185-287 127-230 (238)
14 2jig_A Prolyl-4 hydroxylase; h 81.4 4.2 0.00014 34.5 7.4 46 239-288 171-218 (224)
15 3tht_A Alkylated DNA repair pr 81.2 7 0.00024 35.7 9.2 104 185-302 199-327 (345)
16 2opi_A L-fuculose-1-phosphate 66.8 3 0.0001 35.2 2.6 36 16-51 125-160 (212)
17 1e4c_P L-fuculose 1-phosphate 61.0 4.5 0.00015 34.2 2.6 36 16-51 122-157 (215)
18 1pvt_A Sugar-phosphate aldolas 60.4 5.3 0.00018 34.3 3.0 37 15-51 160-196 (238)
19 2fk5_A Fuculose-1-phosphate al 59.7 8.6 0.00029 32.0 4.1 49 16-64 117-174 (200)
20 2v9l_A Rhamnulose-1-phosphate 54.1 5.9 0.0002 34.8 2.3 36 16-51 179-214 (274)
21 1otj_A Alpha-ketoglutarate-dep 52.9 11 0.00037 33.0 3.8 50 15-67 16-65 (283)
22 2irp_A Putative aldolase class 52.6 7.4 0.00025 32.5 2.6 36 15-51 138-176 (208)
23 4ay7_A Methylcobalamin\: coenz 47.9 32 0.0011 31.0 6.3 43 26-68 302-348 (348)
24 1oih_A Putative alkylsulfatase 47.7 15 0.00051 32.4 3.9 52 15-69 26-78 (301)
25 3ocr_A Class II aldolase/adduc 43.1 13 0.00043 32.7 2.6 37 15-51 155-192 (273)
26 3o2g_A Gamma-butyrobetaine dio 41.0 15 0.00051 34.0 2.9 51 16-69 122-173 (388)
27 2dbn_A Hypothetical protein YB 40.8 10 0.00035 35.8 1.7 56 13-69 97-152 (461)
28 3r1j_A Alpha-ketoglutarate-dep 39.0 26 0.00089 31.1 4.1 52 15-69 20-72 (301)
29 3pvj_A Alpha-ketoglutarate-dep 37.8 22 0.00076 31.0 3.4 51 15-68 14-64 (277)
30 1v7z_A Creatininase, creatinin 37.8 17 0.00059 31.5 2.6 52 13-64 80-136 (260)
31 3m4r_A Uncharacterized protein 35.3 18 0.00062 30.6 2.3 34 17-51 156-190 (222)
32 3no4_A Creatininase, creatinin 33.3 49 0.0017 28.8 4.8 51 14-64 90-144 (267)
33 1m5a_B Insulin B chain; alpha 28.7 59 0.002 18.2 2.8 20 27-46 8-27 (30)
34 2da7_A Zinc finger homeobox pr 26.7 22 0.00077 24.3 1.1 38 137-174 13-50 (71)
35 2z7b_A MLR6791 protein; class 25.3 32 0.0011 30.0 2.2 36 16-51 157-201 (270)
36 2x4k_A 4-oxalocrotonate tautom 25.1 59 0.002 20.4 3.1 25 150-174 18-42 (63)
37 3m0z_A Putative aldolase; MCSG 25.0 75 0.0026 27.0 4.2 40 24-64 169-209 (249)
38 3qy9_A DHPR, dihydrodipicolina 24.9 1E+02 0.0035 26.3 5.3 41 28-68 88-128 (243)
39 4f3y_A DHPR, dihydrodipicolina 23.5 84 0.0029 27.3 4.6 16 154-169 171-186 (272)
40 3ijp_A DHPR, dihydrodipicolina 22.8 88 0.003 27.5 4.6 16 154-169 186-201 (288)
41 3abf_A 4-oxalocrotonate tautom 22.7 85 0.0029 19.9 3.5 24 151-174 17-40 (64)
42 3eat_X Pyoverdine biosynthesis 22.4 44 0.0015 29.3 2.6 52 15-69 29-82 (293)
43 3kt7_A PKHD-type hydroxylase T 21.8 4.3E+02 0.015 25.9 9.4 105 157-286 105-227 (633)
44 1nx8_A CARC, carbapenem syntha 21.6 23 0.00077 30.6 0.4 45 16-67 18-62 (273)
45 2opa_A Probable tautomerase YW 20.5 84 0.0029 19.7 3.1 24 150-173 15-38 (61)
46 1otf_A 4-oxalocrotonate tautom 20.4 84 0.0029 19.7 3.0 23 150-172 15-37 (62)
47 3ghf_A Septum site-determining 20.0 46 0.0016 25.1 1.8 24 31-54 63-86 (120)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.2e-75 Score=537.87 Aligned_cols=299 Identities=29% Similarity=0.518 Sum_probs=263.7
Q ss_pred CCCCcccEEeCCC--ccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC-CCCccccc
Q 019778 12 EAQTVLNCIDLSS--PDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGYTP 88 (336)
Q Consensus 12 ~~~~~iPvIDl~~--~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~lp~e~K~~~~~~-~~~~GY~~ 88 (336)
|...+||||||+. .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+||.+
T Consensus 2 m~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~ 81 (312)
T 3oox_A 2 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIP 81 (312)
T ss_dssp --CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEEC
T ss_pred CCCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccc
Confidence 4567899999973 25778999999999999999999999999999999999999999999999998774 67899999
Q ss_pred cCceeccCCCCCCCCceeeeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019778 89 VLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDL 168 (336)
Q Consensus 89 ~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~p~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl 168 (336)
.+.+..... ...|++|.|.++.+.+.++|. .....+|.||+. +|+||+++++|+++|.+++..||++|+++||+
T Consensus 82 ~g~e~~~~~--~~~D~kE~~~~~~~~~~~~~~--~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 155 (312)
T 3oox_A 82 FGVETAKGA--DHYDLKEFWHMGRDLPPGHRF--RAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKL 155 (312)
T ss_dssp CCCCCSTTS--CSCCCCEEEEECCCCCTTCGG--GGTSCCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccceecCCC--CCCCceeeeEeecCCCcCCcc--hhccCCCCCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 888765432 467999999997654433321 123567999987 79999999999999999999999999999999
Q ss_pred CccccCCccccccccceeeecccCCCCCCCCCCCCccccCCCcCceeeEeeCCCCceeEEeCCCCCCCceEEccccCCeE
Q 019778 169 DADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAF 248 (336)
Q Consensus 169 ~~~~~~~~~~~~~~~s~lrl~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqV~~~~~~~~~~W~~v~~~~~~~ 248 (336)
++++|. +.+..+.+.||++||||++.. +.+ +|+++|||+|+||||+||+++||||+.++ |+|++|+|.||++
T Consensus 156 ~~~~f~--~~~~~~~~~lr~~~Ypp~~~~-~~~-~g~~~HtD~g~lTlL~qd~v~GLqV~~~~----g~W~~V~p~pg~~ 227 (312)
T 3oox_A 156 ERDFFK--PTVQDGNSVLRLLHYPPIPKD-ATG-VRAGAHGDINTITLLLGAEEGGLEVLDRD----GQWLPINPPPGCL 227 (312)
T ss_dssp CTTTTH--HHHTTCCCEEEEEEECCCSSC-CC---CEEEECCCSSEEEEECCTTSCEEEECTT----SCEEECCCCSSCE
T ss_pred CHHHHH--HHhcCCcceeeeEecCCCCCC-cCC-cCccceecCceEEEEeEcCcCceEEECCC----CcEEECCCCCCeE
Confidence 999998 777778899999999999864 233 99999999999999999999999999876 7799999999999
Q ss_pred EEECCchhHHhhCCccccccceecCC-----CCCceeeEEeecCCCCceeecCCCCCCCCCCCCCC-CcCHHHHHHHHHH
Q 019778 249 IVNLGDMLERWSNCIFKSTLHRVLGT-----GRERYSIAFFVEPSHDCLVECLPTCKSDKNPPKFP-PIKCETYLSQRYK 322 (336)
Q Consensus 249 iVn~Gd~l~~~T~G~~ka~~HRV~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~~~-~~t~~e~~~~~~~ 322 (336)
|||+||+||+||||+|||++|||+++ +.+||||+||++|+.|++|.|+++++++++|++|+ ++|++||+.+|++
T Consensus 228 vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~ 307 (312)
T 3oox_A 228 VINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLR 307 (312)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHH
T ss_pred EEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHH
Confidence 99999999999999999999999974 45899999999999999999999999998999999 9999999999998
Q ss_pred hh
Q 019778 323 DT 324 (336)
Q Consensus 323 ~~ 324 (336)
+.
T Consensus 308 ~~ 309 (312)
T 3oox_A 308 EI 309 (312)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 2
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.3e-71 Score=517.45 Aligned_cols=301 Identities=22% Similarity=0.382 Sum_probs=260.9
Q ss_pred CCCCCcccEEeCCC------ccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHH-hCCCHHHHhhhccCCCC
Q 019778 11 AEAQTVLNCIDLSS------PDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRF-FKMPLNEKMKVLRNEKH 83 (336)
Q Consensus 11 ~~~~~~iPvIDl~~------~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~f-F~lp~e~K~~~~~~~~~ 83 (336)
++...+||||||+. ..+.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 3 s~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~---- 75 (331)
T 1odm_A 3 SVSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI---- 75 (331)
T ss_dssp CCCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC----
T ss_pred cccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh----
Confidence 34557899999963 245678999999999999999999999 999999999999 9999999999975
Q ss_pred ccccccCceeccCC----CCCCCCceeeeeeeccCCCCCCC--CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019778 84 RGYTPVLDELLDPD----TQVRGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKA 157 (336)
Q Consensus 84 ~GY~~~~~e~~~~~----~~~~~d~~E~f~~~~~~~~~~p~--~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ 157 (336)
+||.+.+.+.+..+ .....||+|.|+++.+.+.++|. ......++|.||+.+.+|+|++++++|+++|.+++..
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 89998887654321 01367999999998654333332 1223457899998634699999999999999999999
Q ss_pred HHHHHHHhCCCCccccCCccccccccceee--ecccC------C---CCCCCCCCCCccccCCCcCceeeEeeCCCCcee
Q 019778 158 VARIIALALDLDADFFDKPEMLGQAIATLR--LLHYE------G---QISDPSKGMYGAGAHSDYGLITLLATDEVAGLQ 226 (336)
Q Consensus 158 ll~~l~~~Lgl~~~~~~~~~~~~~~~s~lr--l~~Yp------~---~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLq 226 (336)
||++|+++||+++++|. +.+..+.+.|| ++||| | ++. .+.+.+|+++|||+|+||||+||+++|||
T Consensus 156 ll~~la~~Lgl~~~~f~--~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~-~~~~~~g~~~HtD~g~lTlL~qd~v~GLQ 232 (331)
T 1odm_A 156 LLKGYALALGKEENFFA--RHFKPDDTLASVVLIRYPYLDPYPEAAIKTA-ADGTKLSFEWHEDVSLITVLYQSNVQNLQ 232 (331)
T ss_dssp HHHHHHHHTTSCTTTTG--GGCCTTTCCCEEEEEEECCCSSCCGGGCEEC-TTSCEEEEEEECCSSSEEEEEECSSCCEE
T ss_pred HHHHHHHHhCCCHHHHH--HHhcCcHHHHHHHHhhCCCcccccccccCCC-ccccccccccccCCCeEEEEeeCCCCCEE
Confidence 99999999999999999 77777889999 99999 7 543 12238999999999999999999999999
Q ss_pred EEeCCCCCCCceEEccccCCeEEEECCchhHHhhCCccccccceecCCCCCceeeEEeecCCCCceeecCCCCCCCCCCC
Q 019778 227 ICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGTGRERYSIAFFVEPSHDCLVECLPTCKSDKNPP 306 (336)
Q Consensus 227 V~~~~~~~~~~W~~v~~~~~~~iVn~Gd~l~~~T~G~~ka~~HRV~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~ 306 (336)
|++++ | |++|+|.||++|||+||+||+||||+|||+.|||++++.+||||+||++|+.|++|.|++++++++. +
T Consensus 233 V~~~~----g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~ 306 (331)
T 1odm_A 233 VETAA----G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVNLGYDSVIDPFDPREPNGK-S 306 (331)
T ss_dssp EEETT----E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-C
T ss_pred EEcCC----C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEcCCCCCEEeCCCccccccc-c
Confidence 99876 7 9999999999999999999999999999999999988889999999999999999999999988777 8
Q ss_pred CCCCcCHHHHHHHHHHhhhhc
Q 019778 307 KFPPIKCETYLSQRYKDTHAD 327 (336)
Q Consensus 307 ~~~~~t~~e~~~~~~~~~~~~ 327 (336)
+|+++|++||+..+++..+..
T Consensus 307 ~y~~~t~~e~l~~~~~~~~~~ 327 (331)
T 1odm_A 307 DREPLSYGDYLQNGLVSLINK 327 (331)
T ss_dssp SSCCCBHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHh
Confidence 999999999999999988753
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.3e-70 Score=517.68 Aligned_cols=292 Identities=25% Similarity=0.414 Sum_probs=257.8
Q ss_pred CcccEEeCCCc------cHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC---CCCcc
Q 019778 15 TVLNCIDLSSP------DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN---EKHRG 85 (336)
Q Consensus 15 ~~iPvIDl~~~------~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~lp~e~K~~~~~~---~~~~G 85 (336)
.+||||||+.. .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ...+|
T Consensus 45 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~G 124 (356)
T 1gp6_A 45 PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124 (356)
T ss_dssp CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSE
T ss_pred CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccc
Confidence 36999999731 2567899999999999999999999999999999999999999999999999765 25789
Q ss_pred ccccCceeccCCCCCCCCceeeeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019778 86 YTPVLDELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALA 165 (336)
Q Consensus 86 Y~~~~~e~~~~~~~~~~d~~E~f~~~~~~~~~~p~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~ 165 (336)
|.....+.. ....||+|.|+++.. +.+ ...+|.||+. +|+|++++++|+++|.+|+..||++|+++
T Consensus 125 y~~~~~~~~----~~~~d~kE~~~~~~~-p~~-------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~ 190 (356)
T 1gp6_A 125 YGSKLANNA----SGQLEWEDYFFHLAY-PEE-------KRDLSIWPKT--PSDYIEATSEYAKCLRLLATKVFKALSVG 190 (356)
T ss_dssp EECCCCCST----TCCCCSCEEEEEEEE-SGG-------GCCGGGSCCS--STTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCcccCC----CCCCChhheeeeecC-Ccc-------ccccccCCCc--chhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987654321 246799999999854 211 1467899986 79999999999999999999999999999
Q ss_pred CCCCccccCCccccc---cccceeeecccCCCCCCCCCCCCccccCCCcCceeeEeeCCCCceeEEeCCCCCCCceEEcc
Q 019778 166 LDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVA 242 (336)
Q Consensus 166 Lgl~~~~~~~~~~~~---~~~s~lrl~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqV~~~~~~~~~~W~~v~ 242 (336)
||+++++|. +.+. .+.+.||++||||++. ++..+|+++|||+|+||||+||+++||||+.. |+|++|+
T Consensus 191 Lgl~~~~f~--~~~~~~~~~~~~lrl~~YPp~~~--~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~-----g~Wi~V~ 261 (356)
T 1gp6_A 191 LGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQ--PELALGVEAHTDVSALTFILHNMVPGLQLFYE-----GKWVTAK 261 (356)
T ss_dssp TTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSS--TTTCCSEEEECCCSSEEEEEECSCCCEEEEET-----TEEEECC
T ss_pred cCCCHHHHH--HHhcccCCccceeeeeecCCCCC--cccccCcCCccCCCeEEEEEEcCCCCeEEecC-----CcEEECc
Confidence 999999998 6665 4778999999999876 45689999999999999999999999999952 6799999
Q ss_pred ccCCeEEEECCchhHHhhCCccccccceecC-CCCCceeeEEeecCCCCc-eeecCCCCCCCCCCCCCCCcCHHHHHHHH
Q 019778 243 PMKGAFIVNLGDMLERWSNCIFKSTLHRVLG-TGRERYSIAFFVEPSHDC-LVECLPTCKSDKNPPKFPPIKCETYLSQR 320 (336)
Q Consensus 243 ~~~~~~iVn~Gd~l~~~T~G~~ka~~HRV~~-~~~~R~Si~~F~~P~~d~-~i~p~~~~~~~~~~~~~~~~t~~e~~~~~ 320 (336)
|.||++|||+||+||+||||+|||++|||+. ++.+||||+||++|+.|+ +|.|+++++++++|++|+++|++||+..+
T Consensus 262 p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~ 341 (356)
T 1gp6_A 262 CVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHK 341 (356)
T ss_dssp CCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHH
T ss_pred CCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHH
Confidence 9999999999999999999999999999996 677999999999999999 99999999988899999999999999999
Q ss_pred HHhhhhccc
Q 019778 321 YKDTHADLN 329 (336)
Q Consensus 321 ~~~~~~~~~ 329 (336)
+...+....
T Consensus 342 ~~~~~d~~~ 350 (356)
T 1gp6_A 342 LFGKEQEEL 350 (356)
T ss_dssp HHHHHHHHC
T ss_pred HHhccCcch
Confidence 998874433
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=9.5e-71 Score=511.09 Aligned_cols=282 Identities=27% Similarity=0.433 Sum_probs=245.9
Q ss_pred CcccEEeCCC---ccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccCCCCccccccCc
Q 019778 15 TVLNCIDLSS---PDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRNEKHRGYTPVLD 91 (336)
Q Consensus 15 ~~iPvIDl~~---~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~lp~e~K~~~~~~~~~~GY~~~~~ 91 (336)
.+||||||+. .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.+.+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~Gy~~~~~ 79 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA--SKALEGVQA 79 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CCCCCcccc
Confidence 4699999974 34778999999999999999999999999999999999999999999999998644 348887654
Q ss_pred eeccCCCCCCCCceeeeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 019778 92 ELLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDAD 171 (336)
Q Consensus 92 e~~~~~~~~~~d~~E~f~~~~~~~~~~p~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~ 171 (336)
+. ...||+|.|++... |. ...|.||+. +|+||+++++|+++|.+++..||++|+++||++++
T Consensus 80 e~------~~~d~ke~~~~~~~-p~---------~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 141 (319)
T 1w9y_A 80 EV------TDMDWESTFFLKHL-PI---------SNISEVPDL--DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKG 141 (319)
T ss_dssp CG------GGCCCCEEEEEEEE-SC---------CGGGGCTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred cC------CCCChhhheeeecC-Cc---------ccccccccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 42 35799999999743 21 246889986 68999999999999999999999999999999999
Q ss_pred ccCCccccc---cccceeeecccCCCCCCCCCCCCccccCCCcCceeeEeeC-CCCceeEEeCCCCCCCceEEccccCCe
Q 019778 172 FFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGA 247 (336)
Q Consensus 172 ~~~~~~~~~---~~~s~lrl~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd-~~~GLqV~~~~~~~~~~W~~v~~~~~~ 247 (336)
+|. +... .+.+.||++|||||+. ++..+|+++|||+|+||||+|| +++||||+.. |+|++|+|.||+
T Consensus 142 ~f~--~~~~~~~~~~~~lrl~~YPp~~~--~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~-----g~Wi~V~p~pga 212 (319)
T 1w9y_A 142 YLK--NAFYGSKGPNFGTKVSNYPPCPK--PDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD-----GQWIDVPPMRHS 212 (319)
T ss_dssp HHH--HHHHTTTCCEEEEEEEECCCCSC--GGGGSSCCCBCCSSSEEEEEESSSCCCEEEEET-----TEEEECCCCTTC
T ss_pred HHH--HHhcCcCCccceeEEEecCCCcc--cccccccccccCCCceEEEEecCCCCeeeEeeC-----CeEEEcccCCCc
Confidence 988 6554 3567899999999875 4567899999999999999995 7999999753 679999999999
Q ss_pred EEEECCchhHHhhCCccccccceecC-CCCCceeeEEeecCCCCceeecCCCCCCCC---CCCCCCCcCHHHHHHHHHHh
Q 019778 248 FIVNLGDMLERWSNCIFKSTLHRVLG-TGRERYSIAFFVEPSHDCLVECLPTCKSDK---NPPKFPPIKCETYLSQRYKD 323 (336)
Q Consensus 248 ~iVn~Gd~l~~~T~G~~ka~~HRV~~-~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~---~~~~~~~~t~~e~~~~~~~~ 323 (336)
+|||+||+||+||||+|||+.|||+. ++.+||||+||++|+.|++|.|++++++++ +|++|+++|++||+..++..
T Consensus 213 lvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~ 292 (319)
T 1w9y_A 213 IVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGL 292 (319)
T ss_dssp EEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTT
T ss_pred EEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhh
Confidence 99999999999999999999999997 567999999999999999999999999877 59999999999999988776
Q ss_pred hh
Q 019778 324 TH 325 (336)
Q Consensus 324 ~~ 325 (336)
.+
T Consensus 293 ~~ 294 (319)
T 1w9y_A 293 KF 294 (319)
T ss_dssp TC
T ss_pred hc
Confidence 65
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3e-69 Score=499.87 Aligned_cols=280 Identities=19% Similarity=0.272 Sum_probs=232.0
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCCC-HHHHhhhccC--CCCccccccCc
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMP-LNEKMKVLRN--EKHRGYTPVLD 91 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~lp-~e~K~~~~~~--~~~~GY~~~~~ 91 (336)
.+||||||+........++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++... ...+||.+.+.
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~ 82 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLES 82 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC--
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccc
Confidence 46999999621000112389999999999999999999999999999999999999 9999999765 56799999887
Q ss_pred eec----cCCCCCCCCceeeeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 019778 92 ELL----DPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALD 167 (336)
Q Consensus 92 e~~----~~~~~~~~d~~E~f~~~~~~~~~~p~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lg 167 (336)
|.+ .. ....||+|.|+++.. +|.|| +|+|++++++|+++|.+++..||++|+++||
T Consensus 83 e~~~~~~~~--~~~~d~~E~~~~~~~--------------~n~wP----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 142 (311)
T 1dcs_A 83 ESTAQITNT--GSYSDYSMCYSMGTA--------------DNLFP----SGDFERIWTQYFDRQYTASRAVAREVLRATG 142 (311)
T ss_dssp -----------------CEEEEECSS--------------SCCCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccCC--CCCCCcceeeeccCC--------------CCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 754 22 246799999999732 58899 4899999999999999999999999999999
Q ss_pred C----CccccCCccccccccceeeecccCCCCCCCCCC--CCccccCCCcCceeeEeeC-CCCc---eeEEeCCCCCCCc
Q 019778 168 L----DADFFDKPEMLGQAIATLRLLHYEGQISDPSKG--MYGAGAHSDYGLITLLATD-EVAG---LQICKDRDAKPQL 237 (336)
Q Consensus 168 l----~~~~~~~~~~~~~~~s~lrl~~Yp~~~~~~~~~--~~~~~~HtD~g~lTiL~qd-~~~G---LqV~~~~~~~~~~ 237 (336)
+ ++++|. +. .+.||++||||++.....+ .+|+++|||+|+||||+|| .++| |||++ + |+
T Consensus 143 l~~~~~~~~f~--~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~----g~ 211 (311)
T 1dcs_A 143 TEPDGGVEAFL--DC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-G----GA 211 (311)
T ss_dssp CCCTTCHHHHH--SC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-T----TE
T ss_pred CCCcCcHhHHh--hc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-C----CE
Confidence 9 777777 44 6789999999997642223 7899999999999999999 8999 99999 3 67
Q ss_pred eEEccccCCeEEEECCchhHHhhCCccccccceecC-C-----CCCceeeEEeecCCCCceeecCCCCCCCCCCCCC--C
Q 019778 238 WEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG-T-----GRERYSIAFFVEPSHDCLVECLPTCKSDKNPPKF--P 309 (336)
Q Consensus 238 W~~v~~~~~~~iVn~Gd~l~~~T~G~~ka~~HRV~~-~-----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~~--~ 309 (336)
|++|+|.||++|||+||+||+||||+|||++|||+. + +.+||||+||++|+.|++|. ++++++++.|++| +
T Consensus 212 W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~ 290 (311)
T 1dcs_A 212 FTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGE 290 (311)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSS
T ss_pred EEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCC
Confidence 999999999999999999999999999999999997 4 56999999999999999999 9998888889999 9
Q ss_pred CcCHHHHHHHHHHhhhh
Q 019778 310 PIKCETYLSQRYKDTHA 326 (336)
Q Consensus 310 ~~t~~e~~~~~~~~~~~ 326 (336)
++|++||+..++++.|.
T Consensus 291 ~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 291 TATFQDWIGGNYVNIRR 307 (311)
T ss_dssp EEEHHHHHCSSCCCEEC
T ss_pred CccHHHHHHHHHHHHhc
Confidence 99999999988877664
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.7e-66 Score=470.09 Aligned_cols=265 Identities=29% Similarity=0.439 Sum_probs=222.8
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC-CCCccccccC-ce
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKMPLNEKMKVLRN-EKHRGYTPVL-DE 92 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~lp~e~K~~~~~~-~~~~GY~~~~-~e 92 (336)
++||||||+..+ ++++|.+||++||||||+||||+.++++++++.+++||+| |+|+++... ...+||.+.+ .+
T Consensus 2 ~~IPvIDls~~~---~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e 76 (280)
T 3on7_A 2 MKLETIDYRAAD---SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISE 76 (280)
T ss_dssp --CCEEETTSTT---HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC---
T ss_pred CCCCEEECCChh---HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcccc
Confidence 479999998643 5789999999999999999999999999999999999998 789998665 5689999876 45
Q ss_pred eccCCCCCCCCceeeeeeeccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc--
Q 019778 93 LLDPDTQVRGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDCLPGWRETMERFQREALEVAKAVARIIALALDLDA-- 170 (336)
Q Consensus 93 ~~~~~~~~~~d~~E~f~~~~~~~~~~p~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~-- 170 (336)
.... ....|++|.|.+. .||.. +|+||+++++|+++|.+++.+||++|+++||++.
T Consensus 77 ~~~~--~~~~D~kE~~~~~------------------p~~~~--p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 134 (280)
T 3on7_A 77 TAKG--HTVKDIKEYYHVY------------------PWGRI--PDSLRANILAYYEKANTLASELLEWIETYSPDEIKA 134 (280)
T ss_dssp -------CCCCSCEEEEEC------------------TTSCC--CGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHT
T ss_pred ccCC--CCcccHHHHHhcC------------------CCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 4332 2357999998874 26654 5799999999999999999999999999999863
Q ss_pred cccCCc-cccccc-cceeeecccCCCCCCCCCCCCccccCCCcCceeeEeeCCCCceeEEeCCCCCCCceEEccccCCeE
Q 019778 171 DFFDKP-EMLGQA-IATLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAF 248 (336)
Q Consensus 171 ~~~~~~-~~~~~~-~s~lrl~~Yp~~~~~~~~~~~~~~~HtD~g~lTiL~qd~~~GLqV~~~~~~~~~~W~~v~~~~~~~ 248 (336)
.++... +...++ .+.||++||||++.....+.+|+++|||+|+||||+||+++||||++++ |+|++|+|.||++
T Consensus 135 ~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~----g~W~~V~p~pg~~ 210 (280)
T 3on7_A 135 KFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKD----GSWLDVPSDFGNI 210 (280)
T ss_dssp TCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTT----SCEEECCCCTTCE
T ss_pred hhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCC----CCEEECcCCCCEE
Confidence 332200 333344 4899999999998654446899999999999999999999999999875 6799999999999
Q ss_pred EEECCchhHHhhCCccccccceecCC-----CCCceeeEEeecCCCCceeecCCCCCCCCCCCCCCCcCHHHHHHHHHHh
Q 019778 249 IVNLGDMLERWSNCIFKSTLHRVLGT-----GRERYSIAFFVEPSHDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYKD 323 (336)
Q Consensus 249 iVn~Gd~l~~~T~G~~ka~~HRV~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~~~~~t~~e~~~~~~~~ 323 (336)
|||+||+||+||||+|||++|||+++ ..+||||+||++|+.|++|+| ++|++||+++|+.+
T Consensus 211 vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 211 IINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp EEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHH
T ss_pred EEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHH
Confidence 99999999999999999999999974 359999999999999999984 58999999999987
Q ss_pred h
Q 019778 324 T 324 (336)
Q Consensus 324 ~ 324 (336)
.
T Consensus 277 ~ 277 (280)
T 3on7_A 277 L 277 (280)
T ss_dssp T
T ss_pred h
Confidence 5
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=93.02 E-value=0.14 Score=44.60 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=51.3
Q ss_pred eeeecccCCCCCCCCCCCCccccCCCcC-----------ceeeEee--C----CCCceeEEeCCCCCCCceEEccccCCe
Q 019778 185 TLRLLHYEGQISDPSKGMYGAGAHSDYG-----------LITLLAT--D----EVAGLQICKDRDAKPQLWEDVAPMKGA 247 (336)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~g-----------~lTiL~q--d----~~~GLqV~~~~~~~~~~W~~v~~~~~~ 247 (336)
-+++++|.+-. -..+|.|.. .+|+++. + .-|.|.+.+..+ =..|.|..|.
T Consensus 100 ~~~~~rY~~G~--------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-----~~~V~P~~G~ 166 (243)
T 3dkq_A 100 PPLFNRYQGGE--------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-----QQSIKLSAGS 166 (243)
T ss_dssp EEEEEEECTTC--------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-----EEEECCCTTC
T ss_pred cceEEEECCCC--------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-----cEEEecCCCE
Confidence 47788887521 145666642 4566653 2 124466665432 3679999999
Q ss_pred EEEECCchhHHhhCCccccccceecC-CCCCceeeEEeecC
Q 019778 248 FIVNLGDMLERWSNCIFKSTLHRVLG-TGRERYSIAFFVEP 287 (336)
Q Consensus 248 ~iVn~Gd~l~~~T~G~~ka~~HRV~~-~~~~R~Si~~F~~P 287 (336)
+|+.-. .++|+|.. ....|++++.+++-
T Consensus 167 ~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 167 LVLYPS------------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp EEEEET------------TSEEEECCEEEECEEEEEEEEEE
T ss_pred EEEECC------------CCeEcCccccccCEEEEEEehhh
Confidence 998742 36899987 45699999988773
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.57 E-value=3.3 Score=35.10 Aligned_cols=42 Identities=21% Similarity=0.218 Sum_probs=33.1
Q ss_pred CceEEccccCCeEEEECCchhHHhhCCccccccceecC--CCCCceeeEEeecCCC
Q 019778 236 QLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG--TGRERYSIAFFVEPSH 289 (336)
Q Consensus 236 ~~W~~v~~~~~~~iVn~Gd~l~~~T~G~~ka~~HRV~~--~~~~R~Si~~F~~P~~ 289 (336)
..+..|.|.+|.+||.-.. -.|+|.. ...+|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3477899999999998763 3799997 4469999999998865
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.45 E-value=1.3 Score=38.52 Aligned_cols=81 Identities=20% Similarity=0.223 Sum_probs=55.0
Q ss_pred eeecccCCCCCCCCCCCCccccCCCc-----CceeeEee--CC------CCceeEEeCCCCCCCceEEccccCCeEEEEC
Q 019778 186 LRLLHYEGQISDPSKGMYGAGAHSDY-----GLITLLAT--DE------VAGLQICKDRDAKPQLWEDVAPMKGAFIVNL 252 (336)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~~~~~HtD~-----g~lTiL~q--d~------~~GLqV~~~~~~~~~~W~~v~~~~~~~iVn~ 252 (336)
+.+.+|++.- -....|.|. -.+|+++. ++ -|.|.++...+ .....|.|..|.+|+.-
T Consensus 119 ~~~~~Y~~~G-------~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~---~~~~~v~P~~grlv~F~ 188 (247)
T 2hbt_A 119 AMVACYPGNG-------TGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK---AQFADIEPKFDRLLFFW 188 (247)
T ss_dssp EEEEEECSSS-------CCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC---SSCEEECCBTTEEEEEE
T ss_pred EEEEEecCCC-------CcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC---CceEEEEcCCCEEEEEe
Confidence 5677887511 224567765 36788874 21 23467776542 35789999999999987
Q ss_pred CchhHHhhCCccccccceecCCCCCceeeEEeec
Q 019778 253 GDMLERWSNCIFKSTLHRVLGTGRERYSIAFFVE 286 (336)
Q Consensus 253 Gd~l~~~T~G~~ka~~HRV~~~~~~R~Si~~F~~ 286 (336)
.+. -.+|+|......|+||+.++.
T Consensus 189 s~~----------~~~H~V~p~~~~R~sit~W~~ 212 (247)
T 2hbt_A 189 SDR----------RNPHEVQPAYATRYAITVWYF 212 (247)
T ss_dssp CST----------TCCEEECCBSSCEEEEEEEEE
T ss_pred cCC----------CceeeeccCCCEEEEEEEEEc
Confidence 531 168999876779999998665
No 10
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=89.24 E-value=3 Score=35.28 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=50.3
Q ss_pred eeeecccCCCCCCCCCCCCccccCCCc-----C--ceeeEeeCCCCceeEEeCCCCCCCceEEccccCCeEEEECCchhH
Q 019778 185 TLRLLHYEGQISDPSKGMYGAGAHSDY-----G--LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLE 257 (336)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~-----g--~lTiL~qd~~~GLqV~~~~~~~~~~W~~v~~~~~~~iVn~Gd~l~ 257 (336)
.+-+|+|.+ +. +++.|.|. + +++|-+-.. .=+.+..... .+..+.+...+|+++|+-|++-
T Consensus 106 ~~LvN~Y~~-------G~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~--~~~~~~i~L~~GsllvM~G~~r- 173 (211)
T 3i3q_A 106 ACLINRYAP-------GA-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKR--NDPLKRLLLEHGDVVVWGGESR- 173 (211)
T ss_dssp EEEEEEECT-------TC-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSST--TSCCEEEEECTTCEEEECGGGT-
T ss_pred EEEEEEEcC-------CC-CcccccCCCccccCCCEEEEECCCC-eEEEEecccC--CCceEEEECCCCCEEEECchHH-
Confidence 366788885 23 78999993 1 222223211 1233333211 2458899999999999988773
Q ss_pred HhhCCccccccceecCC--------CCCceeeEEeec
Q 019778 258 RWSNCIFKSTLHRVLGT--------GRERYSIAFFVE 286 (336)
Q Consensus 258 ~~T~G~~ka~~HRV~~~--------~~~R~Si~~F~~ 286 (336)
.| .|.|... +..|+|+.|-..
T Consensus 174 ~~--------~H~I~~~~~~~~p~~~~~RIsLTFR~~ 202 (211)
T 3i3q_A 174 LF--------YHGIQPLKAGFHPLTIDCRYNLTFRQA 202 (211)
T ss_dssp TC--------CEEECCCCCCCBTTTBTCEEEEEEECC
T ss_pred ce--------EeccCcccCCcCCCCCCCEEEEEeeec
Confidence 23 5777641 236999998643
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=87.73 E-value=3.1 Score=34.97 Aligned_cols=84 Identities=10% Similarity=0.094 Sum_probs=52.2
Q ss_pred eeecccCCCCCCCCCCCCccccCCCcC--------ceeeEeeCCCCceeEEeCCCC-----CCCceEEccccCCeEEEEC
Q 019778 186 LRLLHYEGQISDPSKGMYGAGAHSDYG--------LITLLATDEVAGLQICKDRDA-----KPQLWEDVAPMKGAFIVNL 252 (336)
Q Consensus 186 lrl~~Yp~~~~~~~~~~~~~~~HtD~g--------~lTiL~qd~~~GLqV~~~~~~-----~~~~W~~v~~~~~~~iVn~ 252 (336)
+-+|+|.+- .-+++.|.|-- +++|-+.. ..=+.+...... ..+..+.+...+|+++|+-
T Consensus 102 ~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 102 VLINRYKDG-------SDHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEESST-------TCCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eEEEEECCC-------CCcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 557889852 23688999862 11222221 112444432110 0134788999999999999
Q ss_pred CchhHHhhCCccccccceecC---CCCCceeeEEee
Q 019778 253 GDMLERWSNCIFKSTLHRVLG---TGRERYSIAFFV 285 (336)
Q Consensus 253 Gd~l~~~T~G~~ka~~HRV~~---~~~~R~Si~~F~ 285 (336)
|++=..| .|.|-. ....|+|+.|-.
T Consensus 174 g~~q~~w--------~H~Ip~~~~~~~~RislTFR~ 201 (204)
T 3s57_A 174 HPTNTHW--------YHSLPVRKKVLAPRVNLTFRK 201 (204)
T ss_dssp TTHHHHE--------EEEECCCTTCCSCEEEEEEEC
T ss_pred chhhhee--------EeeccccCCCCCCEEEEEeee
Confidence 9887778 477654 246999999853
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.23 E-value=3.4 Score=35.13 Aligned_cols=102 Identities=25% Similarity=0.231 Sum_probs=58.3
Q ss_pred HHHHHHHhCCCCccccCCccccccccceeeecccCCCCCCCCCCCCccccCCCcC-----------ceeeEee--C-CCC
Q 019778 158 VARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG-----------LITLLAT--D-EVA 223 (336)
Q Consensus 158 ll~~l~~~Lgl~~~~~~~~~~~~~~~s~lrl~~Yp~~~~~~~~~~~~~~~HtD~g-----------~lTiL~q--d-~~~ 223 (336)
|.+.|+..+|++....+ .+++++|.+-.. ..+|.|.. .+|+|+. | ..|
T Consensus 95 i~~Ri~~~~gl~~~~~E----------~lqv~~Y~~G~~--------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~G 156 (216)
T 3itq_A 95 IEKRISSIMNVPASHGE----------GLHILNYEVDQQ--------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEG 156 (216)
T ss_dssp HHHHHHHHHTSCGGGBC----------CCEEEEECBTCC--------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEE
T ss_pred HHHHHHHhcCceecccc----------ceeEEEeCCCCc--------cccccCCCcCCCcccCCceEEEEEEecccCCcC
Confidence 33444445677643322 367777775211 35666643 4777764 2 223
Q ss_pred ceeEEeCCCCCCCceEEccccCCeEEEECCchhHHhhCCc-cccccceecC-CCCCceeeEEeecC
Q 019778 224 GLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCI-FKSTLHRVLG-TGRERYSIAFFVEP 287 (336)
Q Consensus 224 GLqV~~~~~~~~~~W~~v~~~~~~~iVn~Gd~l~~~T~G~-~ka~~HRV~~-~~~~R~Si~~F~~P 287 (336)
|=-+.... =+.|.|..|.+|+.-.- ..+|. -..++|+|.. ....|+++..+++-
T Consensus 157 GeT~Fp~~------~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 157 GETFFPKL------NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp CCEEETTT------TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred ceeEecCC------CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 43333322 27889999998886531 11222 2468999986 44589998887763
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=83.79 E-value=3.6 Score=35.49 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=53.9
Q ss_pred eeeecccCCCCCCCCCCCCccccCCCcC--------ceeeEeeCCCCceeEEeCCCC------CCCceEEccccCCeEEE
Q 019778 185 TLRLLHYEGQISDPSKGMYGAGAHSDYG--------LITLLATDEVAGLQICKDRDA------KPQLWEDVAPMKGAFIV 250 (336)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~g--------~lTiL~qd~~~GLqV~~~~~~------~~~~W~~v~~~~~~~iV 250 (336)
.+.+|+|++- .-++++|.|-- +.+|-+-.. .=+.+...... .....+.+...+|+++|
T Consensus 127 ~~LvN~Y~~G-------~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 127 SLLCNLYRNE-------KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp EEEEEEECST-------TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred EEEEEEECCC-------CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 4567899852 23688999852 222222211 12333332210 01358999999999999
Q ss_pred ECCchhHHhhCCccccccceecC---CCCCceeeEEeecC
Q 019778 251 NLGDMLERWSNCIFKSTLHRVLG---TGRERYSIAFFVEP 287 (336)
Q Consensus 251 n~Gd~l~~~T~G~~ka~~HRV~~---~~~~R~Si~~F~~P 287 (336)
+-|++=..|. |.|.. ....|+|+.|-...
T Consensus 199 M~G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~v~ 230 (238)
T 2iuw_A 199 MEGATQADWQ--------HRVPKEYHSREPRVNLTFRTVY 230 (238)
T ss_dssp EEETHHHHEE--------EEECCCSSCCCCEEEEEEECCC
T ss_pred EChhhhCccE--------ecCCCcCCCCCCEEEEEeeecc
Confidence 9999877774 55543 36799999997643
No 14
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=81.37 E-value=4.2 Score=34.50 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=32.8
Q ss_pred EEccccCCeEEEECCchhHHhhCCcc-ccccceecC-CCCCceeeEEeecCC
Q 019778 239 EDVAPMKGAFIVNLGDMLERWSNCIF-KSTLHRVLG-TGRERYSIAFFVEPS 288 (336)
Q Consensus 239 ~~v~~~~~~~iVn~Gd~l~~~T~G~~-ka~~HRV~~-~~~~R~Si~~F~~P~ 288 (336)
+.|.|..|.+|+.-- ...+|.. ..++|+|.. ....|+++..+++-.
T Consensus 171 ~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 171 LAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp EEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred eEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 789999999888643 1123432 578999986 445899998887643
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=81.25 E-value=7 Score=35.68 Aligned_cols=104 Identities=18% Similarity=0.219 Sum_probs=63.5
Q ss_pred eeeecccCCCCCCCCCCCCccccCCCcC------ceeeEeeCCCCceeEEeCCCCCCCceEEccccCCeEEEECCchhHH
Q 019778 185 TLRLLHYEGQISDPSKGMYGAGAHSDYG------LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLER 258 (336)
Q Consensus 185 ~lrl~~Yp~~~~~~~~~~~~~~~HtD~g------~lTiL~qd~~~GLqV~~~~~~~~~~W~~v~~~~~~~iVn~Gd~l~~ 258 (336)
.+.+|.|.+ +. ++++|.|.. ++||=+-. ..=+.+.... +.++.+...+|+++|+-|++=..
T Consensus 199 ~~lvN~Y~~-------G~-~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~----~~~~~l~L~~gsLlvM~G~~r~~ 265 (345)
T 3tht_A 199 QMTINQYEP-------GQ-GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPD----GIAVPVMLPRRSLLVMTGESRYL 265 (345)
T ss_dssp EEEEEEECT-------TC-CEEEECCCTTTBCSCEEEEEESS-CEEEEEECTT----SCEEEEEECTTEEEEECTHHHHT
T ss_pred EEEEEEecC-------CC-CEeeccCCchhcCCeEEEEECCC-ceeEEEccCC----CceEEEEcCCCcEEEEChHHhhc
Confidence 466788985 12 789999974 22222211 1123343332 56899999999999999999988
Q ss_pred hhCCccccccceec-------------------CCCCCceeeEEeecCCCCceeecCCCCCCC
Q 019778 259 WSNCIFKSTLHRVL-------------------GTGRERYSIAFFVEPSHDCLVECLPTCKSD 302 (336)
Q Consensus 259 ~T~G~~ka~~HRV~-------------------~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~ 302 (336)
|..|.-+-...-+- .+...|+|+.|=.-+...+.- ..+.+++.
T Consensus 266 w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd~ 327 (345)
T 3tht_A 266 WTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCDS 327 (345)
T ss_dssp SEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCTT
T ss_pred eEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCcccC
Confidence 87665443222210 023479999999877654322 24455543
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=66.80 E-value=3 Score=35.18 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=30.9
Q ss_pred cccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCC
Q 019778 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (336)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi 51 (336)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999975555678899999999888999999996
No 17
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=61.00 E-value=4.5 Score=34.16 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=30.6
Q ss_pred cccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCC
Q 019778 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (336)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi 51 (336)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999965555678889999999888999999996
No 18
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=60.35 E-value=5.3 Score=34.30 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=31.3
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCC
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi 51 (336)
..||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3699999975556678889999999989999999996
No 19
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=59.73 E-value=8.6 Score=32.04 Aligned_cols=49 Identities=10% Similarity=0.100 Sum_probs=36.6
Q ss_pred cccEE-eCCCccHHHHHHHHHHHhhcccEEEEEccCCC--H------HHHHHHHHHHH
Q 019778 16 VLNCI-DLSSPDIQQSVSLLKQACLDCGFFYVVNHGIS--Q------EFMEEVFSQSK 64 (336)
Q Consensus 16 ~iPvI-Dl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~--~------~~~~~~~~~a~ 64 (336)
.||++ ++......++++.+.+++.+.-.+.|.|||+= - +.+++++..+.
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~ 174 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMT 174 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHH
Confidence 79999 88655566788899999998889999999952 2 45555554443
No 20
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=54.08 E-value=5.9 Score=34.83 Aligned_cols=36 Identities=11% Similarity=0.066 Sum_probs=31.1
Q ss_pred cccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCC
Q 019778 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGI 51 (336)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi 51 (336)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999965555678899999999999999999996
No 21
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=52.95 E-value=11 Score=32.98 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=35.8
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHh
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFF 67 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF 67 (336)
+.|+-|||+..-..+..++|.+++.++|++.+.+..++.+.. .+.++.|-
T Consensus 16 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTTS
T ss_pred EEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHhC
Confidence 457777886533345688999999999999999998875543 34455443
No 22
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=52.59 E-value=7.4 Score=32.55 Aligned_cols=36 Identities=11% Similarity=0.114 Sum_probs=29.5
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhccc---EEEEEccCC
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCG---FFYVVNHGI 51 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~G---fF~l~~hGi 51 (336)
..||+++.. ....++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 479999985 556678888999998775 789999996
No 23
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=47.90 E-value=32 Score=31.00 Aligned_cols=43 Identities=14% Similarity=0.131 Sum_probs=34.8
Q ss_pred cHHHHHHHHHHHhhcccEEEEEccCCC----HHHHHHHHHHHHHHhC
Q 019778 26 DIQQSVSLLKQACLDCGFFYVVNHGIS----QEFMEEVFSQSKRFFK 68 (336)
Q Consensus 26 ~~~~~~~~l~~A~~~~GfF~l~~hGi~----~~~~~~~~~~a~~fF~ 68 (336)
..+++.+++.+.++.-||..=.+|||+ .+.++.+.+++++|++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 455677777888888888777799975 6899999999999985
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=47.69 E-value=15 Score=32.41 Aligned_cols=52 Identities=10% Similarity=0.067 Sum_probs=36.8
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccC-CCHHHHHHHHHHHHHHhCC
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHG-ISQEFMEEVFSQSKRFFKM 69 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hG-i~~~~~~~~~~~a~~fF~l 69 (336)
+.|+-|||+..-..+..++|.+++.++|++.+.+.. ++. ++..+.++.|-.+
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 346667776533345688999999999999999988 884 4455556655443
No 25
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=43.09 E-value=13 Score=32.74 Aligned_cols=37 Identities=14% Similarity=0.027 Sum_probs=30.5
Q ss_pred CcccEEeCCCcc-HHHHHHHHHHHhhcccEEEEEccCC
Q 019778 15 TVLNCIDLSSPD-IQQSVSLLKQACLDCGFFYVVNHGI 51 (336)
Q Consensus 15 ~~iPvIDl~~~~-~~~~~~~l~~A~~~~GfF~l~~hGi 51 (336)
..||++|+.... ..++++.|.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 369999996433 5567888999999999999999995
No 26
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=41.02 E-value=15 Score=33.96 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=38.7
Q ss_pred cccEEeCCCc-cHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCC
Q 019778 16 VLNCIDLSSP-DIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (336)
Q Consensus 16 ~iPvIDl~~~-~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~l 69 (336)
++|-||++.. .+++.+.++.+|+.++|+..+.+..++.+ +..+.+++|-.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 7899999632 23567788999999999999999988754 444567777655
No 27
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=40.78 E-value=10 Score=35.82 Aligned_cols=56 Identities=7% Similarity=0.035 Sum_probs=40.4
Q ss_pred CCCcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhCC
Q 019778 13 AQTVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFKM 69 (336)
Q Consensus 13 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~l 69 (336)
...-||.||++.-....+.++..+.+++.|+++|.|. ||.+......+...+|...
T Consensus 97 G~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp TCCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 3457999999632222233556677889999988854 8888888888888888754
No 28
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=39.01 E-value=26 Score=31.09 Aligned_cols=52 Identities=8% Similarity=0.116 Sum_probs=38.5
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEcc-CCCHHHHHHHHHHHHHHhCC
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQSKRFFKM 69 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~h-Gi~~~~~~~~~~~a~~fF~l 69 (336)
++|+=|||+..-..+..++|.+|+.++|.+.+.+. .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 45666788643345678899999999999999999 78765 445567776554
No 29
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=37.83 E-value=22 Score=31.03 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=37.0
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhC
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFK 68 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~ 68 (336)
++|.=|||+..-..+..++|.+|+.++|.+.+.+..++.+. ..+.++.|=.
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGGSC
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 45666888653345678889999999999999999987543 3445665544
No 30
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=37.78 E-value=17 Score=31.50 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=37.8
Q ss_pred CCCccc-EEeCCCccHHHHHHHHHHHhhccc---EEEEEccCCCHHHHHHHHH-HHH
Q 019778 13 AQTVLN-CIDLSSPDIQQSVSLLKQACLDCG---FFYVVNHGISQEFMEEVFS-QSK 64 (336)
Q Consensus 13 ~~~~iP-vIDl~~~~~~~~~~~l~~A~~~~G---fF~l~~hGi~~~~~~~~~~-~a~ 64 (336)
.....| +|+|+...-..++.+|.+.+.++| ++.|.+||=....++.+.+ ..+
T Consensus 80 ~h~~fPGTisl~~~tl~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~~~l~ 136 (260)
T 1v7z_A 80 GGNHFPGTTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGIDLALR 136 (260)
T ss_dssp SCTTSSSCBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHHHHHH
T ss_pred cccCCCceEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHHHHHH
Confidence 334445 677766556678889999999999 7888899977666776665 443
No 31
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=35.28 E-value=18 Score=30.59 Aligned_cols=34 Identities=9% Similarity=0.123 Sum_probs=27.8
Q ss_pred ccEEeCCCccHHHHHHHHHHHhhcc-cEEEEEccCC
Q 019778 17 LNCIDLSSPDIQQSVSLLKQACLDC-GFFYVVNHGI 51 (336)
Q Consensus 17 iPvIDl~~~~~~~~~~~l~~A~~~~-GfF~l~~hGi 51 (336)
||++++..... ++++.|.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999865544 7889999999864 6788999995
No 32
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=33.27 E-value=49 Score=28.85 Aligned_cols=51 Identities=22% Similarity=0.372 Sum_probs=36.2
Q ss_pred CCccc-EEeCCCccHHHHHHHHHHHhhcccE---EEEEccCCCHHHHHHHHHHHH
Q 019778 14 QTVLN-CIDLSSPDIQQSVSLLKQACLDCGF---FYVVNHGISQEFMEEVFSQSK 64 (336)
Q Consensus 14 ~~~iP-vIDl~~~~~~~~~~~l~~A~~~~Gf---F~l~~hGi~~~~~~~~~~~a~ 64 (336)
....| +|.++...-...+.+|.+.+.++|| +.|.+||=....++.+....+
T Consensus 90 h~~fpGTisl~~~t~~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~a~~el~ 144 (267)
T 3no4_A 90 HTAFPGTISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFSETY 144 (267)
T ss_dssp GTTSTTCBCCCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHHHHHHHH
T ss_pred ccCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHHHHHHHH
Confidence 34445 5666655556788889999999995 777899977666776665543
No 33
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=28.69 E-value=59 Score=18.19 Aligned_cols=20 Identities=35% Similarity=0.561 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhhcccEEEE
Q 019778 27 IQQSVSLLKQACLDCGFFYV 46 (336)
Q Consensus 27 ~~~~~~~l~~A~~~~GfF~l 46 (336)
...+++.|.-.|.+-|||+-
T Consensus 8 Gs~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp THHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHHhccCccccC
Confidence 45688889999999999973
No 34
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.69 E-value=22 Score=24.29 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=33.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccC
Q 019778 137 LPGWRETMERFQREALEVAKAVARIIALALDLDADFFD 174 (336)
Q Consensus 137 ~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (336)
+.+.+..++.||..-.+-..+-+..||..+||+.+.+.
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVr 50 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVK 50 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHH
Confidence 56789999999999998888899999999999987644
No 35
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=25.33 E-value=32 Score=30.01 Aligned_cols=36 Identities=6% Similarity=0.120 Sum_probs=28.5
Q ss_pred cccEEeCCC---------ccHHHHHHHHHHHhhcccEEEEEccCC
Q 019778 16 VLNCIDLSS---------PDIQQSVSLLKQACLDCGFFYVVNHGI 51 (336)
Q Consensus 16 ~iPvIDl~~---------~~~~~~~~~l~~A~~~~GfF~l~~hGi 51 (336)
.||++++.. ....++++.|.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 699999631 124578888999999888999999996
No 36
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=25.14 E-value=59 Score=20.40 Aligned_cols=25 Identities=4% Similarity=0.069 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCccccC
Q 019778 150 EALEVAKAVARIIALALDLDADFFD 174 (336)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (336)
.-.+++..|.+++++.||.|++.+.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEE
Confidence 4567888899999999999987544
No 37
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=24.96 E-value=75 Score=27.03 Aligned_cols=40 Identities=18% Similarity=0.308 Sum_probs=31.4
Q ss_pred CccHHHHHHHHHHHhhcccEEEEEcc-CCCHHHHHHHHHHHH
Q 019778 24 SPDIQQSVSLLKQACLDCGFFYVVNH-GISQEFMEEVFSQSK 64 (336)
Q Consensus 24 ~~~~~~~~~~l~~A~~~~GfF~l~~h-Gi~~~~~~~~~~~a~ 64 (336)
.....++.+.+.+||.+.|| ++.-- ||+.+.++.+++.+.
T Consensus 169 Gl~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l 209 (249)
T 3m0z_A 169 GLKHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIAL 209 (249)
T ss_dssp TTTTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHH
Confidence 34566788899999999999 66644 799888888777654
No 38
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=24.91 E-value=1e+02 Score=26.27 Aligned_cols=41 Identities=7% Similarity=0.232 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHhC
Q 019778 28 QQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFFK 68 (336)
Q Consensus 28 ~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF~ 68 (336)
.+..++|.++|++.+.|+--|-.+.-.++..+.+.+-.+|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 44567788888888888888887777777777777666663
No 39
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=23.49 E-value=84 Score=27.30 Aligned_cols=16 Identities=25% Similarity=0.131 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHhCCCC
Q 019778 154 VAKAVARIIALALDLD 169 (336)
Q Consensus 154 l~~~ll~~l~~~Lgl~ 169 (336)
.|..|.+.|++.++.+
T Consensus 171 TA~~la~~i~~~~~~~ 186 (272)
T 4f3y_A 171 TALMMGETIAAATGRS 186 (272)
T ss_dssp HHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhCcc
Confidence 4555667777777654
No 40
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=22.83 E-value=88 Score=27.50 Aligned_cols=16 Identities=13% Similarity=0.027 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHhCCCC
Q 019778 154 VAKAVARIIALALDLD 169 (336)
Q Consensus 154 l~~~ll~~l~~~Lgl~ 169 (336)
.|..|.+.|++.++.+
T Consensus 186 TA~~la~~i~~~~~~~ 201 (288)
T 3ijp_A 186 TALLLGQAAAEGRNIM 201 (288)
T ss_dssp HHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4555667777777654
No 41
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.72 E-value=85 Score=19.88 Aligned_cols=24 Identities=8% Similarity=0.061 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhCCCCccccC
Q 019778 151 ALEVAKAVARIIALALDLDADFFD 174 (336)
Q Consensus 151 ~~~l~~~ll~~l~~~Lgl~~~~~~ 174 (336)
-.++...|.+++++.||.+++++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEE
Confidence 457888899999999999987544
No 42
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=22.44 E-value=44 Score=29.30 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=35.7
Q ss_pred CcccEEeCCCccHHHHHHHHHHHhhcccEEEEEccC-C-CHHHHHHHHHHHHHHhCC
Q 019778 15 TVLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHG-I-SQEFMEEVFSQSKRFFKM 69 (336)
Q Consensus 15 ~~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hG-i-~~~~~~~~~~~a~~fF~l 69 (336)
+.|.=||++..-..+..++|.+++.++|++.+.+.. + +. ++..+.++.|-.+
T Consensus 29 aeI~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~---~~~~~~a~~fG~l 82 (293)
T 3eat_X 29 LLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADA---ESLTRYCHDFGEV 82 (293)
T ss_dssp EEEEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSH---HHHHHHHHHHSCB
T ss_pred eEEECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCH---HHHHHHHHHhCCC
Confidence 345556776433445678899999999999999886 5 43 3455567777554
No 43
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=21.79 E-value=4.3e+02 Score=25.92 Aligned_cols=105 Identities=12% Similarity=0.083 Sum_probs=58.5
Q ss_pred HHHHHHHHhCCCCccccCCccccccccceeeecccCCCCCCCCCCCCccccCCCc-C--ceeeEee----C------CCC
Q 019778 157 AVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDY-G--LITLLAT----D------EVA 223 (336)
Q Consensus 157 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~s~lrl~~Yp~~~~~~~~~~~~~~~HtD~-g--~lTiL~q----d------~~~ 223 (336)
.++.+|+...|++. +. .. ..-+.+.+|.+- -....|.|. + .||+++. + .-|
T Consensus 105 ~Fr~~Ls~iTGi~~--Ls--g~----~~D~~~a~Y~~G--------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GG 168 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK--LS--GS----KTDMSINTYTKG--------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGG 168 (633)
T ss_dssp HHHHHHHHHHTCCC--CC--SS----CCCEEEEEECTT--------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBC
T ss_pred HHHHHHHHHhCCcc--cC--CC----ceeEEEEEeCCC--------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCc
Confidence 34566777777632 11 00 001445566642 235678884 1 3555552 1 134
Q ss_pred ceeEEeCCCC--C-CCceEEccccCCeEEEECCchhHHhhCCccccccceecC--CCCCceeeEEeec
Q 019778 224 GLQICKDRDA--K-PQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG--TGRERYSIAFFVE 286 (336)
Q Consensus 224 GLqV~~~~~~--~-~~~W~~v~~~~~~~iVn~Gd~l~~~T~G~~ka~~HRV~~--~~~~R~Si~~F~~ 286 (336)
-|++++.... + ......|.|.-|++|+..-.- + .++|.|.. ++..|+||+-.++
T Consensus 169 eL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 169 GLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------G---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CEEECCEEETTEECSSCSEEECCCTTEEEEEECCT------T---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred eEEEecCCCcCCCCCCceEEEecCCCeEEEEEcCC------C---CCcCCCCccCCCCCEEEEEEEec
Confidence 4888774410 0 123678899999998875310 1 35787743 5889999986665
No 44
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=21.58 E-value=23 Score=30.63 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=31.1
Q ss_pred cccEEeCCCccHHHHHHHHHHHhhcccEEEEEccCCCHHHHHHHHHHHHHHh
Q 019778 16 VLNCIDLSSPDIQQSVSLLKQACLDCGFFYVVNHGISQEFMEEVFSQSKRFF 67 (336)
Q Consensus 16 ~iPvIDl~~~~~~~~~~~l~~A~~~~GfF~l~~hGi~~~~~~~~~~~a~~fF 67 (336)
.|+-|||+.. + .++|.+++.++|++.+.+..++.+ +..+.++.|-
T Consensus 18 ~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 18 YIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp EECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 3444566433 2 778999999999999999888754 3444455543
No 45
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=20.51 E-value=84 Score=19.66 Aligned_cols=24 Identities=4% Similarity=0.076 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccc
Q 019778 150 EALEVAKAVARIIALALDLDADFF 173 (336)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~~ 173 (336)
.-.+++..|.+++.+.||++++..
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeE
Confidence 446788889999999999998643
No 46
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=20.37 E-value=84 Score=19.71 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCccc
Q 019778 150 EALEVAKAVARIIALALDLDADF 172 (336)
Q Consensus 150 ~~~~l~~~ll~~l~~~Lgl~~~~ 172 (336)
.-.+++..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44678888999999999999864
No 47
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=20.01 E-value=46 Score=25.10 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=17.0
Q ss_pred HHHHHHHhhcccEEEEEccCCCHH
Q 019778 31 VSLLKQACLDCGFFYVVNHGISQE 54 (336)
Q Consensus 31 ~~~l~~A~~~~GfF~l~~hGi~~~ 54 (336)
...|.+.|+++|+..+--.|.+.+
T Consensus 63 l~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 63 WPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp HHHHHHHHHTTTCEEEEEESCCCH
T ss_pred HHHHHHHHHHcCCEEEEEeCCCcH
Confidence 456778888888887766665544
Done!