Query 019779
Match_columns 336
No_of_seqs 141 out of 241
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 06:58:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019779.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019779hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vf6c_ a.194.1.1 (C:) Maguk p 33.7 9.6 0.0007 25.5 1.9 18 294-311 29-46 (51)
2 d1yu8x1 a.14.1.1 (X:42-76) Vil 14.4 14 0.001 23.0 -0.4 12 208-219 3-14 (35)
3 d1unda_ a.14.1.1 (A:) Advillin 14.4 14 0.001 23.1 -0.4 12 208-219 4-15 (36)
4 d1xrda1 f.3.1.1 (A:1-52) Light 12.3 49 0.0036 22.2 1.9 15 84-98 13-27 (52)
5 d1q1ha_ a.4.5.41 (A:) Transcri 10.4 24 0.0017 26.2 -0.3 9 233-241 72-80 (88)
6 d1iyca_ g.31.1.2 (A:) Antifung 9.3 45 0.0032 20.3 0.7 8 70-77 16-23 (36)
7 d1hvwa_ g.3.6.2 (A:) Atracotox 8.9 67 0.0049 18.3 1.3 11 21-36 1-11 (26)
8 d2axtl1 f.23.31.1 (L:1-37) Pho 8.1 1.1E+02 0.008 18.9 2.2 13 90-102 22-34 (37)
9 d1h5oa_ g.9.1.2 (A:) Crotamine 8.0 76 0.0055 20.0 1.4 16 18-33 15-30 (42)
10 d1nuba2 g.3.11.3 (A:53-77) Dom 7.7 55 0.004 18.8 0.6 9 70-78 6-14 (26)
No 1
>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.71 E-value=9.6 Score=25.48 Aligned_cols=18 Identities=33% Similarity=0.307 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHhhhhHHH
Q 019779 294 QLVLHLIHFALFQGWGPI 311 (336)
Q Consensus 294 ~llL~LIHfiLFQNAFel 311 (336)
.++|.|.|=.=|||||.+
T Consensus 29 ~l~lqLvqn~DFQnAfkI 46 (51)
T d1vf6c_ 29 SLLLQLVQNRDFQNAFKI 46 (51)
T ss_dssp HHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHH
Confidence 689999999999999976
No 2
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=14.40 E-value=14 Score=22.99 Aligned_cols=12 Identities=42% Similarity=0.883 Sum_probs=10.5
Q ss_pred hhcccccceeCh
Q 019779 208 EDDFKIVVGVSP 219 (336)
Q Consensus 208 EdDFk~VVGIS~ 219 (336)
++||+.|.|+|-
T Consensus 3 d~dF~~vfgmsr 14 (35)
T d1yu8x1 3 DEDFKAVFGMTR 14 (35)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCCCH
Confidence 689999999985
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.39 E-value=14 Score=23.12 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=10.6
Q ss_pred hhcccccceeCh
Q 019779 208 EDDFKIVVGVSP 219 (336)
Q Consensus 208 EdDFk~VVGIS~ 219 (336)
++||..|.|+|-
T Consensus 4 d~dF~~vFgmsr 15 (36)
T d1unda_ 4 EQDFVSVFGITR 15 (36)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCcCH
Confidence 689999999985
No 4
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=12.34 E-value=49 Score=22.20 Aligned_cols=15 Identities=40% Similarity=0.625 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHHHHH
Q 019779 84 ALHQLHILIFFLAVF 98 (336)
Q Consensus 84 ~lhQLHiFIFvLAv~ 98 (336)
.+--++.|+|+||++
T Consensus 13 ~lva~~~fL~~LAl~ 27 (52)
T d1xrda1 13 ALVGLATFLFVLALL 27 (52)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344578999999964
No 5
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=10.41 E-value=24 Score=26.15 Aligned_cols=9 Identities=33% Similarity=1.376 Sum_probs=5.6
Q ss_pred cCCcchhhh
Q 019779 233 VNGWHALFW 241 (336)
Q Consensus 233 v~Gw~~yfW 241 (336)
-.||++|+|
T Consensus 72 ~~gw~~Y~W 80 (88)
T d1q1ha_ 72 DSGWFIYYW 80 (88)
T ss_dssp -CCCCEEEE
T ss_pred CCCcEEEEE
Confidence 347777777
No 6
>d1iyca_ g.31.1.2 (A:) Antifungal peptide scarabaecin {Beetle (Oryctes rhinoceros) [TaxId: 72550]}
Probab=9.26 E-value=45 Score=20.35 Aligned_cols=8 Identities=38% Similarity=0.891 Sum_probs=6.5
Q ss_pred cccCCCcc
Q 019779 70 TECEKGSE 77 (336)
Q Consensus 70 ~~C~~Gkv 77 (336)
..|+||||
T Consensus 16 sncpkgkv 23 (36)
T d1iyca_ 16 SNCPKGKV 23 (36)
T ss_dssp SCCCSSCE
T ss_pred cCCCCcce
Confidence 46999987
No 7
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=8.90 E-value=67 Score=18.27 Aligned_cols=11 Identities=55% Similarity=1.247 Sum_probs=8.0
Q ss_pred cccccCcCCcccCCCC
Q 019779 21 CIPSKVADTMLPCKAD 36 (336)
Q Consensus 21 CIp~~~~~~~lPC~~~ 36 (336)
|||++- ||...
T Consensus 1 cipsgq-----pcpyn 11 (26)
T d1hvwa_ 1 CIPSGQ-----PCPYN 11 (26)
T ss_dssp CBCTTS-----BCSST
T ss_pred CCCCCC-----cCCCC
Confidence 888874 88654
No 8
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=8.06 E-value=1.1e+02 Score=18.88 Aligned_cols=13 Identities=38% Similarity=0.710 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHH
Q 019779 90 ILIFFLAVFHVLY 102 (336)
Q Consensus 90 iFIFvLAv~HV~y 102 (336)
.+||||||.--.|
T Consensus 22 Llifvl~vLFssY 34 (37)
T d2axtl1 22 LLILVLALLFSSY 34 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5899999876555
No 9
>d1h5oa_ g.9.1.2 (A:) Crotamine {South american rattlesnake (Crotalus durissus terrificus) [TaxId: 8732]}
Probab=8.01 E-value=76 Score=19.97 Aligned_cols=16 Identities=31% Similarity=0.731 Sum_probs=9.9
Q ss_pred ccccccccCcCCcccC
Q 019779 18 SKICIPSKVADTMLPC 33 (336)
Q Consensus 18 skICIp~~~~~~~lPC 33 (336)
.+||+|+|.---=..|
T Consensus 15 ~~iclppssd~gkmdc 30 (42)
T d1h5oa_ 15 EKICLPPSSDFGKMDC 30 (42)
T ss_dssp TSCCSSSSCBCCSSSS
T ss_pred ceeECCCccccccccC
Confidence 5799998754322344
No 10
>d1nuba2 g.3.11.3 (A:53-77) Domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.71 E-value=55 Score=18.80 Aligned_cols=9 Identities=22% Similarity=0.560 Sum_probs=6.7
Q ss_pred cccCCCccc
Q 019779 70 TECEKGSEP 78 (336)
Q Consensus 70 ~~C~~Gkvp 78 (336)
.+|++|||-
T Consensus 6 hhck~gkvc 14 (26)
T d1nuba2 6 HHCKHGKVC 14 (26)
T ss_dssp CCCCTTEEE
T ss_pred cccccCcEe
Confidence 468888874
Done!