Query 019782
Match_columns 336
No_of_seqs 152 out of 224
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 07:01:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019782.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019782hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m0sa2 d.58.40.1 (A:127-198) 10.1 48 0.0035 23.3 1.3 11 177-187 2-12 (72)
2 d1v8fa_ c.26.1.4 (A:) Pantothe 7.3 46 0.0034 28.6 0.2 9 190-198 49-57 (276)
3 d1o8ba2 d.58.40.1 (A:127-198) 6.6 83 0.006 22.0 1.3 10 178-187 2-11 (72)
4 d1xjua_ d.2.1.3 (A:) Endolysin 5.5 1.6E+02 0.011 22.0 2.4 25 192-216 130-154 (158)
5 d1ihoa_ c.26.1.4 (A:) Pantothe 5.5 66 0.0048 27.7 0.2 10 190-199 54-63 (282)
6 d1v0ea2 b.108.1.3 (A:761-910) 4.9 84 0.0061 25.4 0.4 33 159-192 6-39 (150)
7 d1e0na_ b.72.1.1 (A:) Hypothet 4.5 1.2E+02 0.009 18.2 0.9 12 186-197 8-19 (27)
8 d2a84a1 c.26.1.4 (A:3-288) Pan 4.2 72 0.0053 27.4 -0.6 10 190-199 63-72 (286)
9 d1ztwa1 e.8.1.2 (A:24-278) MML 4.1 2.4E+02 0.017 22.7 2.8 37 189-225 34-72 (255)
10 d1cx4a1 b.82.3.2 (A:130-265) R 3.9 3.6E+02 0.026 18.5 3.3 22 189-210 112-133 (136)
No 1
>d1m0sa2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase (RpiA), lid domain {Haemophilus influenzae [TaxId: 727]}
Probab=10.06 E-value=48 Score=23.27 Aligned_cols=11 Identities=36% Similarity=0.791 Sum_probs=8.1
Q ss_pred CccCCCcCCCC
Q 019782 177 ARVPLPLELAE 187 (336)
Q Consensus 177 ~r~plP~~~~e 187 (336)
.++|||+|...
T Consensus 2 ~kFPlPVEV~p 12 (72)
T d1m0sa2 2 STFPLPVEVIP 12 (72)
T ss_dssp SSSCEEEEECG
T ss_pred CCCCEeEEEcH
Confidence 46888887765
No 2
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Probab=7.25 E-value=46 Score=28.59 Aligned_cols=9 Identities=33% Similarity=0.807 Sum_probs=7.4
Q ss_pred ceeechHhh
Q 019782 190 PIYVNAKQY 198 (336)
Q Consensus 190 PvyVNaKQy 198 (336)
.|||||.||
T Consensus 49 SIFVNP~QF 57 (276)
T d1v8fa_ 49 SVFVNPLQF 57 (276)
T ss_dssp EECCCGGGC
T ss_pred EEEecCccC
Confidence 489999993
No 3
>d1o8ba2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase (RpiA), lid domain {Escherichia coli [TaxId: 562]}
Probab=6.61 E-value=83 Score=21.95 Aligned_cols=10 Identities=40% Similarity=0.929 Sum_probs=7.3
Q ss_pred ccCCCcCCCC
Q 019782 178 RVPLPLELAE 187 (336)
Q Consensus 178 r~plP~~~~e 187 (336)
.+|||+|...
T Consensus 2 ~FPlPvEV~p 11 (72)
T d1o8ba2 2 KFPLPVEVIP 11 (72)
T ss_dssp SSCEEEEECG
T ss_pred CCCcCEEEeh
Confidence 5788887754
No 4
>d1xjua_ d.2.1.3 (A:) Endolysin Lyz {Bacteriophage P1 [TaxId: 10678]}
Probab=5.51 E-value=1.6e+02 Score=21.96 Aligned_cols=25 Identities=20% Similarity=0.161 Sum_probs=18.9
Q ss_pred eechHhhHHHHHHHHHHHHHHHhcc
Q 019782 192 YVNAKQYRAILRRRQYRAKLEAQNK 216 (336)
Q Consensus 192 yVNaKQy~rIlrRR~~Rakle~~~k 216 (336)
|.+-|-..++.+||++.++|=.++.
T Consensus 130 ~~~g~~~~GL~~RR~~E~~L~l~g~ 154 (158)
T d1xjua_ 130 NSNGVPLRGLKIRREKERQLCLTGL 154 (158)
T ss_dssp EETTEECHHHHHHHHHHHHHHHTTT
T ss_pred hcCCEEChhHHHHHHHHHHHHHccc
Confidence 3344557899999999998876664
No 5
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=5.50 E-value=66 Score=27.69 Aligned_cols=10 Identities=40% Similarity=0.770 Sum_probs=7.9
Q ss_pred ceeechHhhH
Q 019782 190 PIYVNAKQYR 199 (336)
Q Consensus 190 PvyVNaKQy~ 199 (336)
.|||||.||.
T Consensus 54 SIFVNP~QF~ 63 (282)
T d1ihoa_ 54 SIFVNPMQFD 63 (282)
T ss_dssp EECCCGGGCS
T ss_pred EEEecCccCc
Confidence 4899998853
No 6
>d1v0ea2 b.108.1.3 (A:761-910) Endo-alpha-sialidase {Bacteriophage K1F [TaxId: 344021]}
Probab=4.86 E-value=84 Score=25.37 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=23.1
Q ss_pred CCCchhhccCCcccCCCCCc-cCCCcCCCCCCcee
Q 019782 159 LPPQAMQIHHPQMMGMAPAR-VPLPLELAEDEPIY 192 (336)
Q Consensus 159 Yg~q~~~~~~pq~~g~~~~r-~plP~~~~eeePvy 192 (336)
||..+- ..-|.+||....| ||.|++..+|--||
T Consensus 6 YGAtPn-r~iP~fm~tdGvR~vpaPl~ft~D~~v~ 39 (150)
T d1v0ea2 6 YGAVPN-RAVPVFFDTNGVRTVPAPMEFTGDLGLG 39 (150)
T ss_dssp ECSCCC-SSSCCEECTTSCEEECSCEEECSCEEES
T ss_pred ccCCCC-cccceEecCCCceecccceEecCCceEE
Confidence 444432 4669999988876 89999887764443
No 7
>d1e0na_ b.72.1.1 (A:) Hypothetical protein Yjq8 (Set2p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.50 E-value=1.2e+02 Score=18.19 Aligned_cols=12 Identities=42% Similarity=0.794 Sum_probs=9.2
Q ss_pred CCCCceeechHh
Q 019782 186 AEDEPIYVNAKQ 197 (336)
Q Consensus 186 ~eeePvyVNaKQ 197 (336)
....|+|-||.+
T Consensus 8 engrpmyynaq~ 19 (27)
T d1e0na_ 8 ENGRPLYYNAEQ 19 (27)
T ss_dssp SSSSEEEEETTT
T ss_pred cCCceeeeehhh
Confidence 356899999864
No 8
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.16 E-value=72 Score=27.44 Aligned_cols=10 Identities=40% Similarity=0.747 Sum_probs=8.0
Q ss_pred ceeechHhhH
Q 019782 190 PIYVNAKQYR 199 (336)
Q Consensus 190 PvyVNaKQy~ 199 (336)
.|||||.||.
T Consensus 63 SIFVNP~QF~ 72 (286)
T d2a84a1 63 SIFVNPMQFG 72 (286)
T ss_dssp EECCCCCCTT
T ss_pred EEeecccccC
Confidence 4799999954
No 9
>d1ztwa1 e.8.1.2 (A:24-278) MMLV reverse transcriptase {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=4.12 E-value=2.4e+02 Score=22.71 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=21.4
Q ss_pred CceeechHhhHHHHHH--HHHHHHHHHhcccccCCCCcc
Q 019782 189 EPIYVNAKQYRAILRR--RQYRAKLEAQNKLVKGRKPYL 225 (336)
Q Consensus 189 ePvyVNaKQy~rIlrR--R~~Rakle~~~kl~k~rk~Yl 225 (336)
+|+++.+-.+..-.+. |+.-+++.++|.+.....+|.
T Consensus 34 ~P~~~~~~~~~~~~~~~l~~~i~~ll~~G~I~p~~s~~~ 72 (255)
T d1ztwa1 34 TPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWN 72 (255)
T ss_dssp CCCBCCCCCCCHHHHHHHHHHHHHHHHHTSEEEECCSCB
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHhhhceeeecCCCcc
Confidence 6766654333333332 455567778888877666653
No 10
>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.88 E-value=3.6e+02 Score=18.52 Aligned_cols=22 Identities=9% Similarity=0.215 Sum_probs=17.8
Q ss_pred CceeechHhhHHHHHHHHHHHH
Q 019782 189 EPIYVNAKQYRAILRRRQYRAK 210 (336)
Q Consensus 189 ePvyVNaKQy~rIlrRR~~Rak 210 (336)
.-+.++.+.|.+||++...+.+
T Consensus 112 ~~~~i~~~~f~~ll~~~~~~~r 133 (136)
T d1cx4a1 112 ALWGLDRVTFRRIIVKNNAKKR 133 (136)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHH
T ss_pred EEEEEeHHHHHHHHHhCHHHHH
Confidence 4567899999999998876654
Done!