Query 019784
Match_columns 336
No_of_seqs 341 out of 923
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 07:03:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gj7_B Nuclear pore complex pr 99.4 6E-14 2.1E-18 114.2 2.1 62 261-322 7-98 (98)
2 3gj8_B Nuclear pore complex pr 99.3 2E-13 6.9E-18 109.6 2.1 63 260-322 5-91 (92)
3 3gj3_B Nuclear pore complex pr 98.6 1.6E-08 5.5E-13 66.6 2.2 29 260-288 4-32 (33)
4 1w7p_D VPS36P, YLR417W; ESCRT- 98.4 2.4E-08 8.3E-13 102.7 0.0 63 260-322 114-206 (566)
5 3a9j_C Mitogen-activated prote 98.4 9.7E-08 3.3E-12 62.9 2.7 27 262-288 7-33 (34)
6 3gj3_B Nuclear pore complex pr 98.4 7.8E-08 2.7E-12 63.4 2.1 30 293-322 4-33 (33)
7 2d9g_A YY1-associated factor 2 98.4 1.8E-07 6.2E-12 67.8 3.9 30 261-290 9-38 (53)
8 1nj3_A NPL4; NZF domain, rubre 98.3 2.9E-07 9.8E-12 59.4 2.5 26 262-287 5-30 (31)
9 2d9g_A YY1-associated factor 2 98.2 9.7E-07 3.3E-11 64.0 4.5 32 293-324 8-39 (53)
10 3gj5_B Nuclear pore complex pr 98.2 4.2E-07 1.4E-11 60.2 2.1 30 260-289 4-33 (34)
11 3gj5_B Nuclear pore complex pr 98.2 5.1E-07 1.7E-11 59.8 2.0 30 293-322 4-33 (34)
12 1nj3_A NPL4; NZF domain, rubre 98.2 6.4E-07 2.2E-11 57.8 2.4 27 294-320 4-30 (31)
13 3a9j_C Mitogen-activated prote 98.2 5.8E-07 2E-11 59.2 2.2 28 294-321 6-33 (34)
14 2crc_A Ubiquitin conjugating e 98.2 1.1E-06 3.9E-11 63.4 3.8 29 262-290 9-37 (52)
15 2ebq_A Nuclear pore complex pr 98.1 2.5E-06 8.4E-11 60.4 3.7 31 260-290 8-38 (47)
16 2ebr_A Nuclear pore complex pr 98.0 4.4E-06 1.5E-10 59.1 4.1 31 294-324 9-39 (47)
17 2crc_A Ubiquitin conjugating e 97.9 7.8E-06 2.7E-10 59.0 4.4 30 295-324 9-38 (52)
18 2ebq_A Nuclear pore complex pr 97.9 4.7E-06 1.6E-10 59.0 3.1 35 292-326 7-41 (47)
19 2ebr_A Nuclear pore complex pr 97.9 6.9E-06 2.4E-10 58.1 3.5 33 259-291 7-39 (47)
20 2ebv_A Nuclear pore complex pr 97.9 2.2E-05 7.5E-10 57.7 6.0 30 259-288 27-56 (57)
21 3b08_B Ranbp-type and C3HC4-ty 97.9 5.9E-06 2E-10 62.1 2.8 29 262-290 7-35 (64)
22 3b08_B Ranbp-type and C3HC4-ty 97.8 1.6E-05 5.4E-10 59.7 3.9 31 294-324 6-36 (64)
23 2ebv_A Nuclear pore complex pr 97.6 3.3E-05 1.1E-09 56.7 3.3 31 292-322 27-57 (57)
24 3gj7_B Nuclear pore complex pr 97.5 3.7E-05 1.3E-09 62.3 2.2 29 260-288 69-97 (98)
25 3gj8_B Nuclear pore complex pr 97.2 0.00015 5E-09 57.8 2.2 30 260-289 62-91 (92)
26 2k1p_A Zinc finger RAN-binding 97.1 0.00035 1.2E-08 45.7 3.2 28 261-288 4-31 (33)
27 2lk0_A RNA-binding protein 5; 97.1 0.00021 7.2E-09 46.4 2.0 27 262-288 4-30 (32)
28 2k1p_A Zinc finger RAN-binding 96.9 0.0006 2E-08 44.5 3.2 30 293-322 3-32 (33)
29 2lk0_A RNA-binding protein 5; 96.9 0.0003 1E-08 45.7 1.6 30 293-322 2-31 (32)
30 1n0z_A ZNF265; zinc finger, RN 96.5 0.003 1E-07 44.1 4.3 32 258-289 9-42 (45)
31 1n0z_A ZNF265; zinc finger, RN 96.1 0.0046 1.6E-07 43.1 3.4 32 292-323 10-43 (45)
32 1w7p_D VPS36P, YLR417W; ESCRT- 94.0 0.0097 3.3E-07 61.3 0.0 28 262-289 179-206 (566)
33 2j9u_B VPS36, vacuolar protein 92.1 0.043 1.5E-06 42.2 1.1 29 260-288 14-51 (76)
34 3cqb_A Probable protease HTPX 91.7 0.14 4.6E-06 41.2 3.7 73 22-104 27-99 (107)
35 2cr8_A MDM4 protein; ZF-ranbp 86.8 0.52 1.8E-05 33.7 3.2 30 258-287 6-35 (53)
36 2j9u_B VPS36, vacuolar protein 85.6 0.26 9E-06 37.9 1.2 27 295-321 16-51 (76)
37 3dte_A IRRE protein; radiotole 83.1 4 0.00014 38.7 8.5 59 34-105 54-113 (301)
38 1e8j_A Rubredoxin; iron-sulfur 81.7 0.84 2.9E-05 32.5 2.5 11 263-273 3-13 (52)
39 3c37_A Peptidase, M48 family; 81.5 0.84 2.9E-05 41.7 3.1 77 21-107 40-119 (253)
40 6rxn_A Rubredoxin; electron tr 79.5 0.75 2.6E-05 32.0 1.6 11 310-320 30-40 (46)
41 4axq_A Archaemetzincin; metall 76.6 3.2 0.00011 36.0 5.0 21 85-105 111-131 (163)
42 4rxn_A Rubredoxin; electron tr 75.7 1.2 4E-05 32.0 1.7 10 294-303 34-43 (54)
43 2ddf_A ADAM 17; hydrolase; HET 74.6 1.4 5E-05 39.8 2.5 25 83-107 177-201 (257)
44 2c6a_A Ubiquitin-protein ligas 74.3 1.6 5.4E-05 30.5 2.0 26 262-287 12-37 (46)
45 2cr8_A MDM4 protein; ZF-ranbp 71.5 3.7 0.00013 29.3 3.4 33 293-325 8-40 (53)
46 4aw6_A CAAX prenyl protease 1 70.9 1.9 6.6E-05 43.4 2.6 22 83-104 324-345 (482)
47 1yuz_A Nigerythrin; rubrythrin 70.7 1.4 4.8E-05 39.3 1.3 13 262-274 170-182 (202)
48 2i47_A ADAM 17; TACE-inhibitor 70.4 2.1 7E-05 39.6 2.5 25 83-107 183-207 (288)
49 3b8z_A Protein adamts-5; alpha 70.4 1.7 5.7E-05 38.5 1.8 21 87-107 140-160 (217)
50 1yk4_A Rubredoxin, RD; electro 70.3 1.7 5.7E-05 30.9 1.4 10 263-272 2-11 (52)
51 1bud_A Protein (acutolysin A); 69.4 1.9 6.6E-05 37.5 2.0 21 87-107 132-152 (197)
52 1dx8_A Rubredoxin; electron tr 68.8 1.9 6.4E-05 32.5 1.5 12 262-273 6-17 (70)
53 3pwf_A Rubrerythrin; non heme 68.8 1.7 5.7E-05 37.8 1.4 26 261-286 136-162 (170)
54 2rjq_A Adamts-5; metalloprotea 68.4 1.9 6.4E-05 41.5 1.8 20 88-107 143-162 (378)
55 2v4b_A Adamts-1; zymogen, prot 68.3 1.9 6.5E-05 40.1 1.8 19 88-106 143-161 (300)
56 1atl_A Atrolysin C; metalloend 68.2 2.1 7.2E-05 37.5 2.0 20 88-107 136-155 (202)
57 2w15_A Zinc metalloproteinase 68.1 2.1 7.3E-05 37.4 2.0 21 87-107 135-155 (202)
58 1qua_A Acutolysin-C, hemorrhag 68.0 2.2 7.4E-05 37.2 2.0 20 88-107 135-154 (197)
59 2ysm_A Myeloid/lymphoid or mix 67.9 4.2 0.00015 32.3 3.6 10 261-270 46-55 (111)
60 1kuf_A Atrolysin E, metallopro 67.4 2.2 7.7E-05 37.4 2.0 21 87-107 137-157 (203)
61 1yp1_A FII; FII hydrolase; 1.9 67.2 2.3 7.8E-05 37.3 2.0 20 88-107 135-154 (202)
62 2c6a_A Ubiquitin-protein ligas 66.9 4.6 0.00016 28.1 3.0 33 294-326 11-43 (46)
63 4dd8_A Disintegrin and metallo 66.5 2.9 0.0001 36.8 2.6 23 85-107 130-152 (208)
64 2rjp_A Adamts-4; metalloprotea 66.5 2.2 7.4E-05 40.0 1.8 21 87-107 142-162 (316)
65 2kn9_A Rubredoxin; metalloprot 66.5 1.7 5.9E-05 33.7 0.9 42 261-304 25-68 (81)
66 3shb_A E3 ubiquitin-protein li 65.4 5.3 0.00018 30.4 3.5 11 259-269 17-27 (77)
67 2e6s_A E3 ubiquitin-protein li 65.3 14 0.00049 27.9 5.9 8 296-303 68-75 (77)
68 2v3b_B Rubredoxin 2, rubredoxi 64.4 2.1 7E-05 30.8 0.9 10 263-272 3-12 (55)
69 2e3x_A Coagulation factor X-ac 61.8 3.8 0.00013 40.3 2.6 22 86-107 137-158 (427)
70 1r55_A ADAM 33; metalloproteas 61.8 3.1 0.00011 36.8 1.8 21 87-107 135-155 (214)
71 3v43_A Histone acetyltransfera 60.9 6.8 0.00023 31.3 3.5 10 261-270 53-62 (112)
72 2ero_A VAP-1, vascular apoptos 60.8 3.7 0.00012 40.4 2.3 23 85-107 143-165 (427)
73 3asl_A E3 ubiquitin-protein li 60.2 7.3 0.00025 28.8 3.3 45 260-304 10-68 (70)
74 2dw0_A Catrocollastatin; apopt 59.8 3.9 0.00013 40.2 2.3 22 86-107 135-156 (419)
75 1lko_A Rubrerythrin all-iron(I 58.9 2.9 0.0001 36.7 1.1 11 263-273 155-165 (191)
76 2kwj_A Zinc finger protein DPF 58.8 3.8 0.00013 33.0 1.7 10 261-270 50-59 (114)
77 3j21_g 50S ribosomal protein L 57.7 4 0.00014 29.0 1.4 24 296-319 14-37 (51)
78 2kn9_A Rubredoxin; metalloprot 57.4 9.3 0.00032 29.6 3.6 29 295-323 26-73 (81)
79 1dx8_A Rubredoxin; electron tr 56.3 11 0.00036 28.3 3.7 30 295-324 6-54 (70)
80 3o36_A Transcription intermedi 56.2 21 0.00073 30.6 6.2 53 262-316 3-63 (184)
81 3k7n_A K-like; SVMP, hydrolase 56.1 4.5 0.00015 39.6 2.0 22 86-107 137-158 (397)
82 3k7l_A Atragin; SVMP, metallop 56.0 4.5 0.00015 39.9 2.0 22 86-107 142-163 (422)
83 1s24_A Rubredoxin 2; electron 55.4 4.5 0.00015 31.8 1.5 43 260-304 32-76 (87)
84 3ebh_A PFA-M1, M1 family amino 54.9 5.3 0.00018 43.2 2.4 20 85-104 292-311 (889)
85 1g12_A Peptidyl-Lys metalloend 54.8 3.9 0.00013 35.2 1.1 69 28-100 54-123 (167)
86 1fp0_A KAP-1 corepressor; PHD 54.5 17 0.00058 28.4 4.7 48 258-307 20-74 (88)
87 2gtq_A Aminopeptidase N; alani 53.0 5.9 0.0002 42.5 2.4 20 85-104 284-303 (867)
88 1eb6_A Neutral protease II; me 52.9 4.6 0.00016 35.1 1.3 15 87-101 121-135 (177)
89 2ejq_A Hypothetical protein TT 52.1 11 0.00036 31.5 3.4 80 21-100 4-101 (130)
90 1mm2_A MI2-beta; PHD, zinc fin 50.9 24 0.00084 25.1 4.8 43 260-304 6-55 (61)
91 1z5h_A Tricorn protease intera 50.5 6.8 0.00023 41.4 2.4 22 83-104 254-275 (780)
92 3u9w_A Leukotriene A-4 hydrola 50.2 3.6 0.00012 42.1 0.2 19 86-104 285-303 (608)
93 3b34_A Aminopeptidase N; prote 50.0 7 0.00024 42.2 2.4 20 85-104 309-328 (891)
94 4fke_A Aminopeptidase N; zinc 49.4 7.3 0.00025 41.8 2.4 23 82-104 310-332 (909)
95 2yql_A PHD finger protein 21A; 48.9 11 0.00037 26.4 2.6 42 260-303 6-54 (56)
96 2l5u_A Chromodomain-helicase-D 48.8 19 0.00065 25.7 3.9 45 259-305 7-58 (61)
97 1bqb_A Protein (aureolysin); h 48.7 6.2 0.00021 37.4 1.6 27 78-104 128-154 (301)
98 2xdt_A Endoplasmic reticulum a 48.6 7.6 0.00026 41.7 2.4 20 84-103 298-317 (897)
99 1xwh_A Autoimmune regulator; P 48.4 12 0.00039 27.2 2.7 46 260-307 5-57 (66)
100 4ger_A Gentlyase metalloprotea 48.3 6.5 0.00022 37.4 1.6 77 20-105 63-146 (304)
101 3ask_A E3 ubiquitin-protein li 48.2 11 0.00039 34.3 3.2 8 296-303 216-223 (226)
102 3pwf_A Rubrerythrin; non heme 48.2 6.9 0.00023 33.9 1.7 27 296-322 138-165 (170)
103 1s24_A Rubredoxin 2; electron 47.1 13 0.00043 29.2 2.9 28 295-322 34-80 (87)
104 2ayj_A 50S ribosomal protein L 46.3 9 0.00031 27.7 1.7 27 260-286 16-42 (56)
105 3j21_g 50S ribosomal protein L 46.3 8.3 0.00028 27.3 1.5 25 262-286 13-37 (51)
106 2lri_C Autoimmune regulator; Z 45.3 37 0.0013 24.8 5.1 40 263-304 12-58 (66)
107 3g5c_A ADAM 22; alpha/beta fol 45.1 7.3 0.00025 39.5 1.5 21 87-107 133-153 (510)
108 2g45_A Ubiquitin carboxyl-term 44.5 14 0.00048 30.7 2.9 46 263-318 6-54 (129)
109 3e11_A Predicted zincin-like m 44.3 9.1 0.00031 31.2 1.7 81 21-101 8-103 (114)
110 3khi_A Putative metal-dependen 44.2 12 0.00042 34.9 2.8 90 30-124 70-191 (267)
111 3dnz_A Thermolysin; hydrolase, 43.7 8.3 0.00028 36.9 1.6 76 20-104 70-152 (316)
112 2lbz_A Thuricin17, thurincin H 43.7 9.5 0.00033 23.7 1.3 17 263-287 1-17 (31)
113 1lko_A Rubrerythrin all-iron(I 42.9 7.7 0.00026 34.0 1.2 10 277-286 155-164 (191)
114 1wil_A KIAA1045 protein; ring 42.8 16 0.00054 28.7 2.7 46 263-308 15-79 (89)
115 2k16_A Transcription initiatio 42.7 16 0.00053 26.9 2.7 47 259-305 14-68 (75)
116 3se6_A Endoplasmic reticulum a 41.4 12 0.0004 40.7 2.5 20 84-103 360-379 (967)
117 3u5n_A E3 ubiquitin-protein li 40.4 23 0.00079 31.0 3.9 55 262-318 6-68 (207)
118 4hc9_A Trans-acting T-cell-spe 40.2 11 0.00037 30.8 1.6 25 294-318 57-88 (115)
119 1dl6_A Transcription factor II 40.1 16 0.00056 26.0 2.4 31 276-306 10-40 (58)
120 2yt5_A Metal-response element- 40.1 12 0.0004 26.8 1.6 48 261-308 4-64 (66)
121 1yuz_A Nigerythrin; rubrythrin 38.6 11 0.00039 33.3 1.6 10 277-286 171-180 (202)
122 2x7m_A Archaemetzincin; metall 35.9 16 0.00056 32.3 2.2 20 85-104 136-155 (195)
123 1vq8_Z 50S ribosomal protein L 34.6 6.6 0.00023 30.4 -0.6 34 278-312 28-61 (83)
124 3lmc_A Peptidase, zinc-depende 34.5 18 0.00061 32.7 2.2 21 85-105 140-160 (210)
125 2xq0_A LTA-4 hydrolase, leukot 33.8 14 0.00048 37.9 1.6 16 88-103 295-310 (632)
126 3jyw_9 60S ribosomal protein L 33.7 36 0.0012 25.7 3.4 32 278-310 27-58 (72)
127 3cia_A Cold-active aminopeptid 33.6 14 0.00049 37.6 1.6 17 87-103 293-309 (605)
128 2puy_A PHD finger protein 21A; 33.1 23 0.00077 25.0 2.1 43 262-306 4-53 (60)
129 2l43_A N-teminal domain from h 32.6 23 0.00078 27.3 2.3 48 260-308 22-78 (88)
130 2vqx_A Metalloproteinase; ther 31.6 14 0.00046 35.7 1.0 24 81-104 149-172 (341)
131 4fgm_A Aminopeptidase N family 31.3 51 0.0018 33.7 5.3 21 84-104 263-283 (597)
132 1f62_A Transcription factor WS 30.6 36 0.0012 22.9 2.8 38 266-303 3-48 (51)
133 2e6r_A Jumonji/ARID domain-con 29.2 40 0.0014 26.0 3.2 46 260-305 13-66 (92)
134 2ayj_A 50S ribosomal protein L 29.0 24 0.00081 25.5 1.6 26 294-319 17-42 (56)
135 2apo_B Ribosome biogenesis pro 27.8 37 0.0013 24.7 2.5 32 297-330 7-39 (60)
136 2ku3_A Bromodomain-containing 27.0 35 0.0012 25.2 2.4 45 260-305 13-66 (71)
137 2x3c_A Toxic extracellular end 26.6 18 0.00062 34.7 0.8 16 86-101 285-300 (343)
138 2ect_A Ring finger protein 126 26.1 1.3E+02 0.0045 21.2 5.4 54 259-324 11-66 (78)
139 2yrc_A Protein transport prote 23.4 20 0.00068 25.9 0.3 17 261-277 31-47 (59)
140 2xzl_A ATP-dependent helicase 23.1 23 0.00078 37.6 0.9 23 262-284 10-32 (802)
141 1pft_A TFIIB, PFTFIIBN; N-term 22.9 29 0.001 23.5 1.1 10 295-304 23-32 (50)
142 2wjy_A Regulator of nonsense t 22.3 23 0.00077 37.6 0.7 23 262-284 5-27 (800)
143 1cge_A Fibroblast collagenase; 21.7 37 0.0013 28.6 1.8 20 87-106 110-129 (168)
144 2jsd_A Matrix metalloproteinas 21.6 32 0.0011 28.5 1.3 20 87-106 107-126 (160)
145 1u4g_A Elastase, pseudolysin; 21.0 31 0.001 32.7 1.2 24 80-104 127-150 (301)
146 2aus_D NOP10, ribosome biogene 20.8 76 0.0026 23.1 3.0 32 297-330 6-38 (60)
147 3nqx_A MCP-02, secreted metall 20.4 30 0.001 32.8 1.1 73 21-104 75-151 (306)
148 3ihp_A Ubiquitin carboxyl-term 20.1 64 0.0022 34.4 3.6 47 262-318 186-235 (854)
No 1
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=99.39 E-value=6e-14 Score=114.15 Aligned_cols=62 Identities=27% Similarity=0.673 Sum_probs=26.2
Q ss_pred CCCccCCcccccccccCccccccCCCCcCCC------------------------------CCCCCcccCCcccccCCcC
Q 019784 261 GQMWQCNMCTLLNQPLALTCEACGTQRNKSV------------------------------GNLKGWSCKFCTLDNSSLS 310 (336)
Q Consensus 261 ~~~W~C~~CT~~N~~~a~~C~aC~~~rp~~~------------------------------~~~~~W~C~~CT~~N~~~~ 310 (336)
...|.|+.|+++|...+.+|.+|+++|+... .+.+.|.|++|++.|+..+
T Consensus 7 ~~~W~C~~C~~~N~~~~~kC~aC~~pr~~~~~~~~~~~~~~~s~~~~~~~~~~~gfgd~fk~~~g~W~C~~C~~~N~~~~ 86 (98)
T 3gj7_B 7 GSSWQCDTCLLQNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKPAIGTWDCDTCLVQNKPEA 86 (98)
T ss_dssp ----------------------------------------------------------------CCEECTTTCCEECTTC
T ss_pred CCcccCCccccCChhhcccccccCCCCCCCcccccccCccCcccccccccccccchhhccCCCCCcccCCcCcCCChhhc
Confidence 3579999999999999999999999987421 2468899999999999999
Q ss_pred ccccccCCCCCC
Q 019784 311 ERCLACGEWRYS 322 (336)
Q Consensus 311 ~~C~~Cg~~R~~ 322 (336)
.+|.+|+++|+.
T Consensus 87 ~~C~aC~tpkPg 98 (98)
T 3gj7_B 87 VKCVACETPKPG 98 (98)
T ss_dssp SBCTTTCCBCC-
T ss_pred ceecccCCCCCC
Confidence 999999999973
No 2
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=99.34 E-value=2e-13 Score=109.62 Aligned_cols=63 Identities=24% Similarity=0.653 Sum_probs=26.4
Q ss_pred CCCCccCCcccccccccCccccccCCCCcCCC------------------------CCCCCcccCCcccccCCcCccccc
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRNKSV------------------------GNLKGWSCKFCTLDNSSLSERCLA 315 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp~~~------------------------~~~~~W~C~~CT~~N~~~~~~C~~ 315 (336)
+.++|.|+.|+++|++.+..|.+|+++||... .+.+.|.|+.|+++|+....+|.+
T Consensus 5 ~~g~W~C~~C~~~N~~~~~~C~~C~~pkp~~~~~~~~~~~~~~~~~~~~~g~~~f~~~~g~W~C~~C~~~N~a~~~~C~~ 84 (92)
T 3gj8_B 5 SVGSWECPVCCVSNKAEDSRCVSCTSEKPGLVSASSSNSVPVSLPSGGCLGLDKFKKPEGSWDCEVCLVQNKADSTKCIA 84 (92)
T ss_dssp -----------------------------------------------------------CCEECTTTCCEECSSCSBCTT
T ss_pred CCcCCCCCcCCCEeccccceecccCCCCCCCCCccccccCcccccccccccccccCCCCCcccCCcCCcCChhhcccccc
Confidence 34689999999999999999999999998532 156899999999999999999999
Q ss_pred cCCCCCC
Q 019784 316 CGEWRYS 322 (336)
Q Consensus 316 Cg~~R~~ 322 (336)
|+++|+.
T Consensus 85 C~~pkp~ 91 (92)
T 3gj8_B 85 CESAKPG 91 (92)
T ss_dssp TCCBCC-
T ss_pred cCCCCCC
Confidence 9999985
No 3
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=98.59 E-value=1.6e-08 Score=66.62 Aligned_cols=29 Identities=34% Similarity=0.865 Sum_probs=23.0
Q ss_pred CCCCccCCcccccccccCccccccCCCCc
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRN 288 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp 288 (336)
..++|.|+.|||+|++.+.+|++|+++||
T Consensus 4 ~~g~W~C~~C~~~N~~~~~kC~aC~tpkP 32 (33)
T 3gj3_B 4 GSGTWDCDTCLVQNKPEAVKCVACETPKP 32 (33)
T ss_dssp --CCEECTTTCCEECTTCSBCTTTCCBCC
T ss_pred CCCceeCCcccCCCccccCEEcccCCCCC
Confidence 34678888888888888888888888876
No 4
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=98.44 E-value=2.4e-08 Score=102.67 Aligned_cols=63 Identities=25% Similarity=0.560 Sum_probs=0.0
Q ss_pred CCCCccCCccccccccc---------CccccccCCCCcCCC---------------------CCCCCcccCCcccccCCc
Q 019784 260 VGQMWQCNMCTLLNQPL---------ALTCEACGTQRNKSV---------------------GNLKGWSCKFCTLDNSSL 309 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~---------a~~C~aC~~~rp~~~---------------------~~~~~W~C~~CT~~N~~~ 309 (336)
....|.|+.|+|.|+.. ...|.+||.+.+... .....-.|++|||.|+++
T Consensus 114 ~~~tWvC~ICsfsN~~~~~f~~~~~~~p~C~~CGi~p~~~~~k~~i~~~~~~~~~~~~~~~~~~~~~~~CP~CTF~NHPs 193 (566)
T 1w7p_D 114 VVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKSSINCSNAIDPNANPQNQFGVNSENICPACTFANHPQ 193 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccceeccccccCCCCCCCCCcccCCCCcccccCCCCchhhhhhhhhccccCCCcccCccccccccCCCCCcccccCChh
Confidence 34689999999999963 357999998865322 111346799999999999
Q ss_pred CccccccCCCCCC
Q 019784 310 SERCLACGEWRYS 322 (336)
Q Consensus 310 ~~~C~~Cg~~R~~ 322 (336)
...|+|||++..+
T Consensus 194 l~~CEiCg~~L~~ 206 (566)
T 1w7p_D 194 IGNCEICGHRLPN 206 (566)
T ss_dssp -------------
T ss_pred hhcccccCCcCCC
Confidence 9999999999876
No 5
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=98.42 E-value=9.7e-08 Score=62.93 Aligned_cols=27 Identities=41% Similarity=1.091 Sum_probs=21.1
Q ss_pred CCccCCcccccccccCccccccCCCCc
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQRN 288 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~rp 288 (336)
..|.|+.|||+|++....|++|+++|+
T Consensus 7 ~~W~C~~CT~~N~~~~~~Ce~C~~~r~ 33 (34)
T 3a9j_C 7 AQWNCTACTFLNHPALIRCEQCEMPRH 33 (34)
T ss_dssp CCEECTTTCCEECTTCSBCTTTCCBSC
T ss_pred CcCCCCCCccccCCCCCeeCCCCCcCc
Confidence 468888888888888888888887765
No 6
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=98.42 E-value=7.8e-08 Score=63.36 Aligned_cols=30 Identities=23% Similarity=0.647 Sum_probs=26.2
Q ss_pred CCCCcccCCcccccCCcCccccccCCCCCC
Q 019784 293 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 322 (336)
Q Consensus 293 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~ 322 (336)
..+.|.|++||+.|.+...+|.+|+++|+.
T Consensus 4 ~~g~W~C~~C~~~N~~~~~kC~aC~tpkPg 33 (33)
T 3gj3_B 4 GSGTWDCDTCLVQNKPEAVKCVACETPKPG 33 (33)
T ss_dssp --CCEECTTTCCEECTTCSBCTTTCCBCC-
T ss_pred CCCceeCCcccCCCccccCEEcccCCCCCC
Confidence 457899999999999999999999999973
No 7
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=1.8e-07 Score=67.83 Aligned_cols=30 Identities=30% Similarity=0.824 Sum_probs=22.0
Q ss_pred CCCccCCcccccccccCccccccCCCCcCC
Q 019784 261 GQMWQCNMCTLLNQPLALTCEACGTQRNKS 290 (336)
Q Consensus 261 ~~~W~C~~CT~~N~~~a~~C~aC~~~rp~~ 290 (336)
...|.|+.|||+|.+.+..|++|+++|+.+
T Consensus 9 ~~~W~C~~CT~~N~~~~~~C~~C~~pr~~s 38 (53)
T 2d9g_A 9 EGYWDCSVCTFRNSAEAFKCMMCDVRKGTS 38 (53)
T ss_dssp CCCEECSSSCCEECSSCSSCSSSCCCCCCC
T ss_pred CCCcCCCCCccCCCCCCCccCCCCCcCCcc
Confidence 346777777777777777777777777654
No 8
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=98.29 E-value=2.9e-07 Score=59.42 Aligned_cols=26 Identities=46% Similarity=1.062 Sum_probs=19.2
Q ss_pred CCccCCcccccccccCccccccCCCC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQR 287 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~r 287 (336)
..|.|+.|||+|++....|++|+.+|
T Consensus 5 ~~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 5 AMWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp CCEECSSSCCEECSSCSSCSSSCCCC
T ss_pred ccccCCcccccCCCCCCccCCcCCCC
Confidence 46777777777777777777777665
No 9
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=9.7e-07 Score=64.00 Aligned_cols=32 Identities=25% Similarity=0.649 Sum_probs=28.6
Q ss_pred CCCCcccCCcccccCCcCccccccCCCCCCCC
Q 019784 293 NLKGWSCKFCTLDNSSLSERCLACGEWRYSNG 324 (336)
Q Consensus 293 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~ 324 (336)
..+.|.|+.|||+|+.....|+||+++|+.+.
T Consensus 8 ~~~~W~C~~CT~~N~~~~~~C~~C~~pr~~s~ 39 (53)
T 2d9g_A 8 DEGYWDCSVCTFRNSAEAFKCMMCDVRKGTST 39 (53)
T ss_dssp CCCCEECSSSCCEECSSCSSCSSSCCCCCCCC
T ss_pred CCCCcCCCCCccCCCCCCCccCCCCCcCCccc
Confidence 35689999999999999999999999998543
No 10
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=98.22 E-value=4.2e-07 Score=60.20 Aligned_cols=30 Identities=23% Similarity=0.663 Sum_probs=20.8
Q ss_pred CCCCccCCcccccccccCccccccCCCCcC
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRNK 289 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp~ 289 (336)
..+.|.|+.|++.|..++.+|.+|++++|.
T Consensus 4 ~~G~W~C~~C~v~N~~~~~kC~aCet~Kpg 33 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKADSTKCIACESAKPG 33 (34)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTCCBC--
T ss_pred CCCceECCeeEeECccccCEEcccCCcCCC
Confidence 346788888888888888888888877764
No 11
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=98.19 E-value=5.1e-07 Score=59.81 Aligned_cols=30 Identities=27% Similarity=0.753 Sum_probs=25.5
Q ss_pred CCCCcccCCcccccCCcCccccccCCCCCC
Q 019784 293 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 322 (336)
Q Consensus 293 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~ 322 (336)
+.+.|.|+.|++.|..+..+|.+|+++|+.
T Consensus 4 ~~G~W~C~~C~v~N~~~~~kC~aCet~Kpg 33 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKADSTKCIACESAKPG 33 (34)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTCCBC--
T ss_pred CCCceECCeeEeECccccCEEcccCCcCCC
Confidence 467999999999999999999999999975
No 12
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=98.19 E-value=6.4e-07 Score=57.79 Aligned_cols=27 Identities=30% Similarity=0.658 Sum_probs=25.3
Q ss_pred CCCcccCCcccccCCcCccccccCCCC
Q 019784 294 LKGWSCKFCTLDNSSLSERCLACGEWR 320 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~~C~~Cg~~R 320 (336)
...|.|+.|||.|++....|+||+.+|
T Consensus 4 ~~~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 4 SAMWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp SCCEECSSSCCEECSSCSSCSSSCCCC
T ss_pred CccccCCcccccCCCCCCccCCcCCCC
Confidence 357999999999999999999999988
No 13
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=98.19 E-value=5.8e-07 Score=59.16 Aligned_cols=28 Identities=32% Similarity=0.572 Sum_probs=25.9
Q ss_pred CCCcccCCcccccCCcCccccccCCCCC
Q 019784 294 LKGWSCKFCTLDNSSLSERCLACGEWRY 321 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~~C~~Cg~~R~ 321 (336)
...|.|+.|||.|.+....|+||+++|+
T Consensus 6 ~~~W~C~~CT~~N~~~~~~Ce~C~~~r~ 33 (34)
T 3a9j_C 6 GAQWNCTACTFLNHPALIRCEQCEMPRH 33 (34)
T ss_dssp CCCEECTTTCCEECTTCSBCTTTCCBSC
T ss_pred CCcCCCCCCccccCCCCCeeCCCCCcCc
Confidence 3589999999999999999999999985
No 14
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=98.18 E-value=1.1e-06 Score=63.42 Aligned_cols=29 Identities=38% Similarity=0.862 Sum_probs=21.2
Q ss_pred CCccCCcccccccccCccccccCCCCcCC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQRNKS 290 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~rp~~ 290 (336)
..|.|+.|||+|++....|++|+.+|+..
T Consensus 9 ~~W~Cp~CTf~N~p~~~~CemC~~prp~~ 37 (52)
T 2crc_A 9 VGWQCPGCTFINKPTRPGCEMCCRARPEA 37 (52)
T ss_dssp SSBCCTTTCCCBCTTCSSCSSSCCCCCTT
T ss_pred CCccCCCcccccCCCCCeeCCCCCcCCcc
Confidence 36777777777777777777777777643
No 15
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=2.5e-06 Score=60.44 Aligned_cols=31 Identities=35% Similarity=0.844 Sum_probs=21.6
Q ss_pred CCCCccCCcccccccccCccccccCCCCcCC
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRNKS 290 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp~~ 290 (336)
..+.|.|..|++.|...+.+|.+|++++|..
T Consensus 8 ~~g~W~C~~C~v~N~a~~~kC~aCetpKpgs 38 (47)
T 2ebq_A 8 VIGTWDCDTCLVQNKPEAIKCVACETPKPGT 38 (47)
T ss_dssp CSSSEECSSSCCEECSSCSBCSSSCCBCSCS
T ss_pred CCCceECCeeeccCccCCceecCcCCCCCCC
Confidence 3456777777777777777777777777654
No 16
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.01 E-value=4.4e-06 Score=59.15 Aligned_cols=31 Identities=29% Similarity=0.744 Sum_probs=17.7
Q ss_pred CCCcccCCcccccCCcCccccccCCCCCCCC
Q 019784 294 LKGWSCKFCTLDNSSLSERCLACGEWRYSNG 324 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~ 324 (336)
.+.|.|..|++.|.....+|.+|+++|+.+.
T Consensus 9 ~gsW~C~~C~v~N~a~~~kC~aC~~pkpg~~ 39 (47)
T 2ebr_A 9 EGSWDCELCLVQNKADSTKCLACESAKPGTK 39 (47)
T ss_dssp CSSCCCSSSCCCCCSSCSBCSSSCCBCCCCC
T ss_pred CCeeECCeeecCCcCCcceecCcCCCCCCCc
Confidence 3455555555555555555555555555544
No 17
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=97.95 E-value=7.8e-06 Score=59.03 Aligned_cols=30 Identities=30% Similarity=0.560 Sum_probs=27.6
Q ss_pred CCcccCCcccccCCcCccccccCCCCCCCC
Q 019784 295 KGWSCKFCTLDNSSLSERCLACGEWRYSNG 324 (336)
Q Consensus 295 ~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~ 324 (336)
..|.|+.|||.|......|+||+.+|+...
T Consensus 9 ~~W~Cp~CTf~N~p~~~~CemC~~prp~~~ 38 (52)
T 2crc_A 9 VGWQCPGCTFINKPTRPGCEMCCRARPEAY 38 (52)
T ss_dssp SSBCCTTTCCCBCTTCSSCSSSCCCCCTTS
T ss_pred CCccCCCcccccCCCCCeeCCCCCcCCccc
Confidence 489999999999999999999999998653
No 18
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.94 E-value=4.7e-06 Score=59.00 Aligned_cols=35 Identities=23% Similarity=0.595 Sum_probs=31.4
Q ss_pred CCCCCcccCCcccccCCcCccccccCCCCCCCCCC
Q 019784 292 GNLKGWSCKFCTLDNSSLSERCLACGEWRYSNGPP 326 (336)
Q Consensus 292 ~~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~Pp 326 (336)
.+.+.|.|..|++.|.....+|.+|+++|+.+.+.
T Consensus 7 ~~~g~W~C~~C~v~N~a~~~kC~aCetpKpgs~~~ 41 (47)
T 2ebq_A 7 GVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVK 41 (47)
T ss_dssp CCSSSEECSSSCCEECSSCSBCSSSCCBCSCSSCG
T ss_pred CCCCceECCeeeccCccCCceecCcCCCCCCCccC
Confidence 35678999999999999999999999999987753
No 19
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=6.9e-06 Score=58.14 Aligned_cols=33 Identities=21% Similarity=0.616 Sum_probs=29.4
Q ss_pred CCCCCccCCcccccccccCccccccCCCCcCCC
Q 019784 259 DVGQMWQCNMCTLLNQPLALTCEACGTQRNKSV 291 (336)
Q Consensus 259 ~~~~~W~C~~CT~~N~~~a~~C~aC~~~rp~~~ 291 (336)
...+.|.|+.|++.|...+.+|.+|++++|...
T Consensus 7 ~~~gsW~C~~C~v~N~a~~~kC~aC~~pkpg~~ 39 (47)
T 2ebr_A 7 GPEGSWDCELCLVQNKADSTKCLACESAKPGTK 39 (47)
T ss_dssp SCCSSCCCSSSCCCCCSSCSBCSSSCCBCCCCC
T ss_pred CCCCeeECCeeecCCcCCcceecCcCCCCCCCc
Confidence 345789999999999999999999999999764
No 20
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=2.2e-05 Score=57.68 Aligned_cols=30 Identities=20% Similarity=0.602 Sum_probs=26.7
Q ss_pred CCCCCccCCcccccccccCccccccCCCCc
Q 019784 259 DVGQMWQCNMCTLLNQPLALTCEACGTQRN 288 (336)
Q Consensus 259 ~~~~~W~C~~CT~~N~~~a~~C~aC~~~rp 288 (336)
...+.|.|+.|.+.|.....+|.+|++++|
T Consensus 27 ~~~GsWeC~~C~V~N~a~~~kC~ACetpKP 56 (57)
T 2ebv_A 27 RPIGSWECSVCCVSNNAEDNKCVSCMSEKP 56 (57)
T ss_dssp CCSSSCCCSSSCCCCCSSCSBCSSSCCBCC
T ss_pred CCCCeeeCCeeEccCccCCceeeEcCCcCC
Confidence 445789999999999999999999999987
No 21
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=97.87 E-value=5.9e-06 Score=62.07 Aligned_cols=29 Identities=38% Similarity=0.866 Sum_probs=20.5
Q ss_pred CCccCCcccccccccCccccccCCCCcCC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQRNKS 290 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~rp~~ 290 (336)
..|.|+.|||+|++....|++|+++++..
T Consensus 7 ~~W~CP~CTf~N~p~~p~CEmC~~prp~~ 35 (64)
T 3b08_B 7 VGWQCPGCTFINKPTRPGCEMCCRARPET 35 (64)
T ss_dssp CSEECTTTCCEECTTCSBCTTTCCBCCSS
T ss_pred CCCcCCCccccCCCCCCccCcCCCCCCcc
Confidence 35777777777777777777777776643
No 22
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=97.79 E-value=1.6e-05 Score=59.75 Aligned_cols=31 Identities=29% Similarity=0.525 Sum_probs=27.9
Q ss_pred CCCcccCCcccccCCcCccccccCCCCCCCC
Q 019784 294 LKGWSCKFCTLDNSSLSERCLACGEWRYSNG 324 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~ 324 (336)
...|.|+.|||.|+.....|+||+++|++..
T Consensus 6 ~~~W~CP~CTf~N~p~~p~CEmC~~prp~~~ 36 (64)
T 3b08_B 6 PVGWQCPGCTFINKPTRPGCEMCCRARPETY 36 (64)
T ss_dssp CCSEECTTTCCEECTTCSBCTTTCCBCCSSC
T ss_pred CCCCcCCCccccCCCCCCccCcCCCCCCccc
Confidence 3479999999999999999999999998653
No 23
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=3.3e-05 Score=56.71 Aligned_cols=31 Identities=19% Similarity=0.699 Sum_probs=28.2
Q ss_pred CCCCCcccCCcccccCCcCccccccCCCCCC
Q 019784 292 GNLKGWSCKFCTLDNSSLSERCLACGEWRYS 322 (336)
Q Consensus 292 ~~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~ 322 (336)
.+.+.|.|..|.+.|.....+|.+|+++|+.
T Consensus 27 ~~~GsWeC~~C~V~N~a~~~kC~ACetpKPG 57 (57)
T 2ebv_A 27 RPIGSWECSVCCVSNNAEDNKCVSCMSEKPG 57 (57)
T ss_dssp CCSSSCCCSSSCCCCCSSCSBCSSSCCBCCC
T ss_pred CCCCeeeCCeeEccCccCCceeeEcCCcCCC
Confidence 3567999999999999999999999999973
No 24
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=97.48 E-value=3.7e-05 Score=62.28 Aligned_cols=29 Identities=34% Similarity=0.848 Sum_probs=26.2
Q ss_pred CCCCccCCcccccccccCccccccCCCCc
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRN 288 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp 288 (336)
..+.|.|+.|++.|...+.+|.+|+++||
T Consensus 69 ~~g~W~C~~C~~~N~~~~~~C~aC~tpkP 97 (98)
T 3gj7_B 69 AIGTWDCDTCLVQNKPEAVKCVACETPKP 97 (98)
T ss_dssp --CCEECTTTCCEECTTCSBCTTTCCBCC
T ss_pred CCCcccCCcCcCCChhhcceecccCCCCC
Confidence 45789999999999999999999999987
No 25
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=97.16 E-value=0.00015 Score=57.81 Aligned_cols=30 Identities=23% Similarity=0.666 Sum_probs=26.3
Q ss_pred CCCCccCCcccccccccCccccccCCCCcC
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRNK 289 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp~ 289 (336)
..+.|.|+.|+++|+..+..|.+|+++||.
T Consensus 62 ~~g~W~C~~C~~~N~a~~~~C~~C~~pkp~ 91 (92)
T 3gj8_B 62 PEGSWDCEVCLVQNKADSTKCIACESAKPG 91 (92)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTCCBCC-
T ss_pred CCCcccCCcCCcCChhhcccccccCCCCCC
Confidence 458999999999999999999999999985
No 26
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=97.09 E-value=0.00035 Score=45.65 Aligned_cols=28 Identities=29% Similarity=0.741 Sum_probs=19.6
Q ss_pred CCCccCCcccccccccCccccccCCCCc
Q 019784 261 GQMWQCNMCTLLNQPLALTCEACGTQRN 288 (336)
Q Consensus 261 ~~~W~C~~CT~~N~~~a~~C~aC~~~rp 288 (336)
.+.|.|+.|..+|......|..|+++|+
T Consensus 4 ~gDW~C~~C~~~Nfa~R~~C~~C~~pk~ 31 (33)
T 2k1p_A 4 ANDWQCKTCSNVNWARRSECNMCNTPKY 31 (33)
T ss_dssp SSSCBCSSSCCBCCTTCSBCSSSCCBTT
T ss_pred CCCcccCCCCCccccccccccccCCcCC
Confidence 4567777777777777777777777665
No 27
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=97.08 E-value=0.00021 Score=46.41 Aligned_cols=27 Identities=37% Similarity=0.804 Sum_probs=18.3
Q ss_pred CCccCCcccccccccCccccccCCCCc
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQRN 288 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~rp 288 (336)
+.|.|+.|.++|......|..|+++|+
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~pr~ 30 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGADKF 30 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCCBTT
T ss_pred CCCCcCcCcCCcChhcceecCCCCcCC
Confidence 457776677777776666777766665
No 28
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=96.93 E-value=0.0006 Score=44.54 Aligned_cols=30 Identities=27% Similarity=0.673 Sum_probs=27.7
Q ss_pred CCCCcccCCcccccCCcCccccccCCCCCC
Q 019784 293 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 322 (336)
Q Consensus 293 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~ 322 (336)
+.+.|.|+.|.+.|+..-..|-.|++||+.
T Consensus 3 ~~gDW~C~~C~~~Nfa~R~~C~~C~~pk~~ 32 (33)
T 2k1p_A 3 SANDWQCKTCSNVNWARRSECNMCNTPKYA 32 (33)
T ss_dssp SSSSCBCSSSCCBCCTTCSBCSSSCCBTTC
T ss_pred CCCCcccCCCCCccccccccccccCCcCCC
Confidence 467899999999999999999999999964
No 29
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=96.92 E-value=0.0003 Score=45.71 Aligned_cols=30 Identities=27% Similarity=0.832 Sum_probs=27.5
Q ss_pred CCCCcccCCcccccCCcCccccccCCCCCC
Q 019784 293 NLKGWSCKFCTLDNSSLSERCLACGEWRYS 322 (336)
Q Consensus 293 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~ 322 (336)
+.+.|.|+.|.+.|...-..|-.|+++|+.
T Consensus 2 k~gDW~C~~C~~~Nfa~r~~C~~C~~pr~~ 31 (32)
T 2lk0_A 2 KFEDWLCNKCCLNNFRKRLKCFRCGADKFD 31 (32)
T ss_dssp CCSEEECTTTCCEEETTCCBCTTTCCBTTC
T ss_pred CCCCCCcCcCcCCcChhcceecCCCCcCCC
Confidence 467899999999999999999999999963
No 30
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=96.49 E-value=0.003 Score=44.07 Aligned_cols=32 Identities=22% Similarity=0.587 Sum_probs=24.3
Q ss_pred CCCCCCccCC--cccccccccCccccccCCCCcC
Q 019784 258 VDVGQMWQCN--MCTLLNQPLALTCEACGTQRNK 289 (336)
Q Consensus 258 ~~~~~~W~C~--~CT~~N~~~a~~C~aC~~~rp~ 289 (336)
....+.|.|+ .|..+|......|..|+++|+.
T Consensus 9 ~~~~GDW~C~~~~C~~~Nfa~R~~C~~C~~pr~~ 42 (45)
T 1n0z_A 9 RVSDGDWICPDKKCGNVNFARRTSCDRCGREKTT 42 (45)
T ss_dssp SSCSSSCBCSSTTTCCBCCSSCSBCSSSCCBCCC
T ss_pred CCCCCCcCCCCCCCCCEEccccccccccCCcCCC
Confidence 3455678888 7888888888888888888765
No 31
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=96.07 E-value=0.0046 Score=43.07 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=29.0
Q ss_pred CCCCCcccC--CcccccCCcCccccccCCCCCCC
Q 019784 292 GNLKGWSCK--FCTLDNSSLSERCLACGEWRYSN 323 (336)
Q Consensus 292 ~~~~~W~C~--~CT~~N~~~~~~C~~Cg~~R~~s 323 (336)
.+.++|.|+ .|.+.|+..-..|-.|+++|+..
T Consensus 10 ~~~GDW~C~~~~C~~~Nfa~R~~C~~C~~pr~~~ 43 (45)
T 1n0z_A 10 VSDGDWICPDKKCGNVNFARRTSCDRCGREKTTG 43 (45)
T ss_dssp SCSSSCBCSSTTTCCBCCSSCSBCSSSCCBCCCC
T ss_pred CCCCCcCCCCCCCCCEEccccccccccCCcCCCC
Confidence 467899999 89999999999999999999753
No 32
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=93.99 E-value=0.0097 Score=61.35 Aligned_cols=28 Identities=32% Similarity=0.655 Sum_probs=0.0
Q ss_pred CCccCCcccccccccCccccccCCCCcC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQRNK 289 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~rp~ 289 (336)
..=.||.|||+|.++-..|++|+++-+.
T Consensus 179 ~~~~CP~CTF~NHPsl~~CEiCg~~L~~ 206 (566)
T 1w7p_D 179 SENICPACTFANHPQIGNCEICGHRLPN 206 (566)
T ss_dssp ----------------------------
T ss_pred cCCCCCcccccCChhhhcccccCCcCCC
Confidence 3567999999999999999999988654
No 33
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=92.10 E-value=0.043 Score=42.22 Aligned_cols=29 Identities=28% Similarity=0.749 Sum_probs=20.3
Q ss_pred CCCCccCCcccccccccCc---------cccccCCCCc
Q 019784 260 VGQMWQCNMCTLLNQPLAL---------TCEACGTQRN 288 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~---------~C~aC~~~rp 288 (336)
....|.|+.|.|.|+.... .|.+||...+
T Consensus 14 ~~~tWVCpICsfsN~v~s~fdp~~~~lPpC~aCGIkP~ 51 (76)
T 2j9u_B 14 VVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPAD 51 (76)
T ss_dssp -CEEEECTTTCCEEEESSCCCTTCSSCCBCTTTCCBCC
T ss_pred cccceECccccccCcCccccCCCCCCCCcccccCccCC
Confidence 3457999999999987654 3666665543
No 34
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.66 E-value=0.14 Score=41.16 Aligned_cols=73 Identities=15% Similarity=0.032 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCceeeeecccCCCCCCceeeecCCCcEEEEEecCCCCCCCCCCHHHHHHHHHhhhhhcCc
Q 019784 22 DARQILEKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTMLHELCHNEY 101 (336)
Q Consensus 22 ~A~~~L~rlA~~v~pIM~~~~w~V~~L~Ef~P~~~~llG~N~N~G~~I~LRLR~~~~~~~f~p~~~i~~vllHELaH~~~ 101 (336)
+-.+++++++.... -..++|-.+..-.| |.-.+|...+ +..|.|-.-.- ..+.-+++..||.|||+|+.+
T Consensus 27 ~L~~~~~~l~~~~~----~~~~~v~v~~~~~~-NAf~~g~~~~-~~~i~v~~gLl----~~l~~~El~aVlaHElgH~~~ 96 (107)
T 3cqb_A 27 WLLETVGRQAQQAG----IGMPTVAIYDSADI-NAFATGAKRD-DSLVAVSTGLL----HNMTRDEAEAVLAHEVSHIAN 96 (107)
T ss_dssp HHHHHHHHHHHHHT----CCCCEEEEECCSSE-EEEEECCC---CCEEEEEHHHH----HHSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC----CCCCeEEEEECCCc-CEEEEecCCC-CCEEEEcHHHH----hhCCHHHHHHHHHHHHHHHHC
Confidence 34445555554332 11245554433111 4444554432 33565554221 235889999999999999998
Q ss_pred CCC
Q 019784 102 GPH 104 (336)
Q Consensus 102 ~~H 104 (336)
+++
T Consensus 97 ~h~ 99 (107)
T 3cqb_A 97 GDM 99 (107)
T ss_dssp TCE
T ss_pred CCH
Confidence 764
No 35
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=86.83 E-value=0.52 Score=33.65 Aligned_cols=30 Identities=30% Similarity=0.643 Sum_probs=22.3
Q ss_pred CCCCCCccCCcccccccccCccccccCCCC
Q 019784 258 VDVGQMWQCNMCTLLNQPLALTCEACGTQR 287 (336)
Q Consensus 258 ~~~~~~W~C~~CT~~N~~~a~~C~aC~~~r 287 (336)
.-..+.|.|..|--.|++....|..|-.-|
T Consensus 6 ~~~eD~WkC~~C~k~N~Pl~ryC~rCwaLR 35 (53)
T 2cr8_A 6 SGSEDEWQCTECKKFNSPSKRYCFRCWALR 35 (53)
T ss_dssp SCCSCCEECSSSCCEECSSCCBCTTTCCBC
T ss_pred CCCcceeecccccccCCCccchhHHHHHhh
Confidence 334567888888888888888888887665
No 36
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=85.55 E-value=0.26 Score=37.88 Aligned_cols=27 Identities=30% Similarity=0.797 Sum_probs=21.1
Q ss_pred CCcccCCcccccCCcCc---------cccccCCCCC
Q 019784 295 KGWSCKFCTLDNSSLSE---------RCLACGEWRY 321 (336)
Q Consensus 295 ~~W~C~~CT~~N~~~~~---------~C~~Cg~~R~ 321 (336)
..|.|+.|.|.|...+. .|.+||-..+
T Consensus 16 ~tWVCpICsfsN~v~s~fdp~~~~lPpC~aCGIkP~ 51 (76)
T 2j9u_B 16 STWVCPICMVSNETQGEFTKDTLPTPICINCGVPAD 51 (76)
T ss_dssp EEEECTTTCCEEEESSCCCTTCSSCCBCTTTCCBCC
T ss_pred cceECccccccCcCccccCCCCCCCCcccccCccCC
Confidence 47999999999986655 4888886544
No 37
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=83.12 E-value=4 Score=38.69 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=43.1
Q ss_pred HHHHHhhcCc-eeeeecccCCCCCCceeeecCCCcEEEEEecCCCCCCCCCCHHHHHHHHHhhhhhcCcCCCc
Q 019784 34 VQPIMRKHKW-KVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTMLHELCHNEYGPHN 105 (336)
Q Consensus 34 v~pIM~~~~w-~V~~L~Ef~P~~~~llG~N~N~G~~I~LRLR~~~~~~~f~p~~~i~~vllHELaH~~~~~H~ 105 (336)
+.-|+.+.|. .|-. .+| + ...|+..+....|.|+-+. +.....-||+|||+|++...+.
T Consensus 54 ~~~Iae~lGI~~V~~-~~L-~---~~~G~~~~~~~~I~LN~~~--------~~~rqrFTLAHELGHllLh~~~ 113 (301)
T 3dte_A 54 THSLMHGLDGITLTF-MPM-G---QRDGAYDPEHHVILINSQV--------RPERQRFTLAHEISHALLLGDD 113 (301)
T ss_dssp HHHHHHTCSSCEEEE-ECC-T---TCCEEEETTTTEEEEETTS--------CHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHCCCcEEEE-EcC-C---CCCEEEECCCcEEEEcCCC--------ChhhHHHHHHHHHHHHHhcccc
Confidence 7788888888 6653 333 3 2467766667788888664 5678889999999999876554
No 38
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=81.71 E-value=0.84 Score=32.46 Aligned_cols=11 Identities=18% Similarity=0.754 Sum_probs=7.0
Q ss_pred CccCCcccccc
Q 019784 263 MWQCNMCTLLN 273 (336)
Q Consensus 263 ~W~C~~CT~~N 273 (336)
.|.|..|.++=
T Consensus 3 ~y~C~~CGyvY 13 (52)
T 1e8j_A 3 IYVCTVCGYEY 13 (52)
T ss_dssp CEECSSSCCCC
T ss_pred cEEeCCCCeEE
Confidence 46677776663
No 39
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=81.50 E-value=0.84 Score=41.68 Aligned_cols=77 Identities=13% Similarity=0.182 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHh--hcCceeeeecccCCCCCCceeeecCCCcEEEEEecCCCCCCCCC-CHHHHHHHHHhhhh
Q 019784 21 DDARQILEKVAKQVQPIMR--KHKWKVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFF-PYEQILDTMLHELC 97 (336)
Q Consensus 21 ~~A~~~L~rlA~~v~pIM~--~~~w~V~~L~Ef~P~~~~llG~N~N~G~~I~LRLR~~~~~~~f~-p~~~i~~vllHELa 97 (336)
.+..++|++|+..+..-+. ...|+|-.+.-=.| |.-.+| |..|.|.--.- ..+ .-+.|..||.|||+
T Consensus 40 ~~l~~~l~~l~~~l~~~~~~~~~~~~v~v~~~~~~-NAfa~~-----gg~I~v~~gLl----~~l~~~~ELaaVLaHElg 109 (253)
T 3c37_A 40 PEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSV-NAFAIP-----GGRVYVHTGLL----KAADNETELAGVLAHEIN 109 (253)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCSCCEEEEECCCSC-CEEEET-----TTEEEEEHHHH----HHCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCCCC-CeeEcC-----CCeEEeeHHHH----hhCCCHHHHHHHHHHHHH
Confidence 3456677777776544333 33577766632111 222222 44676654432 234 67899999999999
Q ss_pred hcCcCCCchh
Q 019784 98 HNEYGPHNAD 107 (336)
Q Consensus 98 H~~~~~H~~~ 107 (336)
|+.++++-..
T Consensus 110 H~~~~H~~~~ 119 (253)
T 3c37_A 110 HAVARHGTRQ 119 (253)
T ss_dssp HHHTTHHHHH
T ss_pred HHHCcCHHHH
Confidence 9998866443
No 40
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=79.55 E-value=0.75 Score=32.02 Aligned_cols=11 Identities=27% Similarity=0.573 Sum_probs=5.3
Q ss_pred CccccccCCCC
Q 019784 310 SERCLACGEWR 320 (336)
Q Consensus 310 ~~~C~~Cg~~R 320 (336)
.|.|..||.++
T Consensus 30 dw~CP~Cg~~k 40 (46)
T 6rxn_A 30 DWCCPVCGVSK 40 (46)
T ss_dssp TCBCTTTCCBG
T ss_pred CCcCcCCCCcH
Confidence 34455555444
No 41
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=76.59 E-value=3.2 Score=35.96 Aligned_cols=21 Identities=24% Similarity=0.260 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhhhhcCcCCCc
Q 019784 85 YEQILDTMLHELCHNEYGPHN 105 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H~ 105 (336)
...+..+++|||.|+.-..|-
T Consensus 111 ~~r~~k~~~HElGH~lGL~HC 131 (163)
T 4axq_A 111 RERVVKEAVHEIGHVLGLKHC 131 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCCC
Confidence 668899999999999999994
No 42
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=75.66 E-value=1.2 Score=32.04 Aligned_cols=10 Identities=30% Similarity=1.159 Sum_probs=5.2
Q ss_pred CCCcccCCcc
Q 019784 294 LKGWSCKFCT 303 (336)
Q Consensus 294 ~~~W~C~~CT 303 (336)
+..|.|+.|.
T Consensus 34 P~dw~CP~Cg 43 (54)
T 4rxn_A 34 PDDWVCPLCG 43 (54)
T ss_dssp CTTCBCTTTC
T ss_pred CCCCcCcCCC
Confidence 3455555554
No 43
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=74.62 E-value=1.4 Score=39.83 Aligned_cols=25 Identities=28% Similarity=0.211 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHhhhhhcCcCCCchh
Q 019784 83 FPYEQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 83 ~p~~~i~~vllHELaH~~~~~H~~~ 107 (336)
.+......||.|||.|+.-++||..
T Consensus 177 ~~~~~~a~~~AHElGHnlG~~HD~~ 201 (257)
T 2ddf_A 177 ILTKEADLVTTHELGHNFGAEHDPD 201 (257)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCT
T ss_pred cccceeeeeeeeehhhhcCcccCCC
Confidence 3445578999999999999999864
No 44
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=74.31 E-value=1.6 Score=30.46 Aligned_cols=26 Identities=35% Similarity=0.962 Sum_probs=21.3
Q ss_pred CCccCCcccccccccCccccccCCCC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQR 287 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~r 287 (336)
+.|.|..|--.|++....|.-|-+-|
T Consensus 12 D~WkC~~C~~~N~Pl~r~C~rCw~LR 37 (46)
T 2c6a_A 12 DYWKCTSCNEMNPPLPSHCNRCWALR 37 (46)
T ss_dssp GCEECTTTCCEECSSCSSCTTTCCCC
T ss_pred ceEecccccccCCCccchhhHHHhhc
Confidence 67888888888888888888887665
No 45
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=71.51 E-value=3.7 Score=29.26 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=28.7
Q ss_pred CCCCcccCCcccccCCcCccccccCCCCCCCCC
Q 019784 293 NLKGWSCKFCTLDNSSLSERCLACGEWRYSNGP 325 (336)
Q Consensus 293 ~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~P 325 (336)
....|.|..|--+|.+-...|.-|-+.|..=-|
T Consensus 8 ~eD~WkC~~C~k~N~Pl~ryC~rCwaLRk~Wlp 40 (53)
T 2cr8_A 8 SEDEWQCTECKKFNSPSKRYCFRCWALRKDWYS 40 (53)
T ss_dssp CSCCEECSSSCCEECSSCCBCTTTCCBCCCCCC
T ss_pred CcceeecccccccCCCccchhHHHHHhhcccCC
Confidence 356899999999999999999999998876444
No 46
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=70.86 E-value=1.9 Score=43.42 Aligned_cols=22 Identities=32% Similarity=0.427 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHhhhhhcCcCCC
Q 019784 83 FPYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 83 ~p~~~i~~vllHELaH~~~~~H 104 (336)
+.-+.|..|+.|||.|..+++-
T Consensus 324 l~~~El~aVlaHElgH~~~~~~ 345 (482)
T 4aw6_A 324 CKNEEVLAVLGHELGHWKLGHT 345 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHHcccH
Confidence 7889999999999999998754
No 47
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=70.66 E-value=1.4 Score=39.33 Aligned_cols=13 Identities=15% Similarity=0.761 Sum_probs=10.1
Q ss_pred CCccCCccccccc
Q 019784 262 QMWQCNMCTLLNQ 274 (336)
Q Consensus 262 ~~W~C~~CT~~N~ 274 (336)
..|.|..|.++=.
T Consensus 170 ~~~~C~~CG~i~~ 182 (202)
T 1yuz_A 170 KFHLCPICGYIHK 182 (202)
T ss_dssp CEEECSSSCCEEE
T ss_pred cEEEECCCCCEEc
Confidence 4699999988843
No 48
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=70.39 E-value=2.1 Score=39.60 Aligned_cols=25 Identities=28% Similarity=0.211 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHhhhhhcCcCCCchh
Q 019784 83 FPYEQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 83 ~p~~~i~~vllHELaH~~~~~H~~~ 107 (336)
+++.....||.|||.|+.-++||..
T Consensus 183 ~~~~~~a~~~AHElGHnlGm~HD~~ 207 (288)
T 2i47_A 183 ILTKEADLVTTHELGHNFGAEHDPD 207 (288)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred cchhhHHHHHHHHHHhhcCCccCCC
Confidence 3445578999999999999999854
No 49
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=70.37 E-value=1.7 Score=38.46 Aligned_cols=21 Identities=24% Similarity=0.139 Sum_probs=18.4
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||.|||.|+.-++||..
T Consensus 140 ~~a~~~AHElGHnlG~~HD~~ 160 (217)
T 3b8z_A 140 HAAFTVAHEIGHLLGLSHDDS 160 (217)
T ss_dssp SHHHHHHHHHHHHTTCCCTTS
T ss_pred chhhhhHhhhhhhcCCcCCCC
Confidence 356899999999999999964
No 50
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=70.27 E-value=1.7 Score=30.88 Aligned_cols=10 Identities=20% Similarity=0.869 Sum_probs=6.2
Q ss_pred CccCCccccc
Q 019784 263 MWQCNMCTLL 272 (336)
Q Consensus 263 ~W~C~~CT~~ 272 (336)
.|.|..|.++
T Consensus 2 ~~~C~~CGyv 11 (52)
T 1yk4_A 2 KLSCKICGYI 11 (52)
T ss_dssp EEEESSSSCE
T ss_pred cEEeCCCCeE
Confidence 4666666665
No 51
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=69.43 E-value=1.9 Score=37.52 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=18.7
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||.|||.|+.-++||..
T Consensus 132 ~~a~~~AHElGH~lG~~HD~~ 152 (197)
T 1bud_A 132 LVAITLAHEMAHNLGVSHDEG 152 (197)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhhhcCCccCCC
Confidence 368899999999999999865
No 52
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=68.84 E-value=1.9 Score=32.49 Aligned_cols=12 Identities=17% Similarity=0.747 Sum_probs=7.7
Q ss_pred CCccCCcccccc
Q 019784 262 QMWQCNMCTLLN 273 (336)
Q Consensus 262 ~~W~C~~CT~~N 273 (336)
..|.|..|.++=
T Consensus 6 ~~y~C~vCGyiY 17 (70)
T 1dx8_A 6 GKYECEACGYIY 17 (70)
T ss_dssp SCEEETTTCCEE
T ss_pred ceEEeCCCCEEE
Confidence 457777776663
No 53
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=68.84 E-value=1.7 Score=37.85 Aligned_cols=26 Identities=23% Similarity=0.621 Sum_probs=15.7
Q ss_pred CCCccCCcccccccccC-ccccccCCC
Q 019784 261 GQMWQCNMCTLLNQPLA-LTCEACGTQ 286 (336)
Q Consensus 261 ~~~W~C~~CT~~N~~~a-~~C~aC~~~ 286 (336)
...|.|+.|.++=.... ..|.+|+.+
T Consensus 136 ~~~~~C~~CG~i~~~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVDEAPEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEESCCCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCCCCCCCCCCCCCC
Confidence 46788888888743221 256666544
No 54
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=68.43 E-value=1.9 Score=41.49 Aligned_cols=20 Identities=25% Similarity=0.125 Sum_probs=18.1
Q ss_pred HHHHHHhhhhhcCcCCCchh
Q 019784 88 ILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 88 i~~vllHELaH~~~~~H~~~ 107 (336)
+..||+|||.|+.-++||..
T Consensus 143 ~a~~~AHElGHnlGm~HD~~ 162 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGLSHDDS 162 (378)
T ss_dssp HHHHHHHHHHHHTTCCCTTS
T ss_pred hhhhhhhhhhhhcCccCCCC
Confidence 67899999999999999964
No 55
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=68.28 E-value=1.9 Score=40.06 Aligned_cols=19 Identities=37% Similarity=0.287 Sum_probs=17.6
Q ss_pred HHHHHHhhhhhcCcCCCch
Q 019784 88 ILDTMLHELCHNEYGPHNA 106 (336)
Q Consensus 88 i~~vllHELaH~~~~~H~~ 106 (336)
+..||.|||.|+.-++||.
T Consensus 143 ~a~t~AHElGHnlG~~HD~ 161 (300)
T 2v4b_A 143 AAFTTAHELGHVFNMPHDD 161 (300)
T ss_dssp HHHHHHHHHHHHTTCCCTT
T ss_pred ceehhhhhhhhhcCCcCCC
Confidence 6789999999999999985
No 56
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=68.24 E-value=2.1 Score=37.48 Aligned_cols=20 Identities=40% Similarity=0.345 Sum_probs=18.2
Q ss_pred HHHHHHhhhhhcCcCCCchh
Q 019784 88 ILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 88 i~~vllHELaH~~~~~H~~~ 107 (336)
+..||.|||.|+.-++||..
T Consensus 136 ~a~~~AHElGHnlG~~HD~~ 155 (202)
T 1atl_A 136 MGVTMAHELGHNLGMEHDGK 155 (202)
T ss_dssp HHHHHHHHHHHHTTCCCCCT
T ss_pred eEEEehhhhccccCceeCCC
Confidence 67899999999999999865
No 57
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=68.12 E-value=2.1 Score=37.39 Aligned_cols=21 Identities=38% Similarity=0.316 Sum_probs=18.7
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||.|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGH~lG~~HD~~ 155 (202)
T 2w15_A 135 WVAVTMAHELGHNLGIHHDTG 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhhhcCCccCCC
Confidence 467899999999999999865
No 58
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=67.95 E-value=2.2 Score=37.20 Aligned_cols=20 Identities=40% Similarity=0.378 Sum_probs=18.5
Q ss_pred HHHHHHhhhhhcCcCCCchh
Q 019784 88 ILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 88 i~~vllHELaH~~~~~H~~~ 107 (336)
+..||.|||.|+.-++||..
T Consensus 135 ~a~~~AHElGH~lG~~HD~~ 154 (197)
T 1qua_A 135 MAVTMAHELGHNLGMNHDGA 154 (197)
T ss_dssp HHHHHHHHHHHHTTCCCCCG
T ss_pred HHHHHHHHHHHhcCCCCCCC
Confidence 67899999999999999976
No 59
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=67.88 E-value=4.2 Score=32.29 Aligned_cols=10 Identities=40% Similarity=1.079 Sum_probs=8.0
Q ss_pred CCCccCCccc
Q 019784 261 GQMWQCNMCT 270 (336)
Q Consensus 261 ~~~W~C~~CT 270 (336)
...|.|+.|.
T Consensus 46 ~~~W~C~~C~ 55 (111)
T 2ysm_A 46 RAGWQCPECK 55 (111)
T ss_dssp STTCCCTTTC
T ss_pred ccCccCCcCC
Confidence 3689999885
No 60
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=67.44 E-value=2.2 Score=37.40 Aligned_cols=21 Identities=38% Similarity=0.358 Sum_probs=18.9
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||.|||.|+.-++||..
T Consensus 137 ~~a~~~AHElGH~lG~~HD~~ 157 (203)
T 1kuf_A 137 MVAVTMTHELGHNLGMEHDDK 157 (203)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred hhHHHHHHHhhhhcCCCCCCC
Confidence 477899999999999999876
No 61
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=67.21 E-value=2.3 Score=37.26 Aligned_cols=20 Identities=35% Similarity=0.307 Sum_probs=18.3
Q ss_pred HHHHHHhhhhhcCcCCCchh
Q 019784 88 ILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 88 i~~vllHELaH~~~~~H~~~ 107 (336)
+..||.|||.|+.-++||..
T Consensus 135 ~a~~~AHElGH~lG~~HD~~ 154 (202)
T 1yp1_A 135 MAVVMAHELGHNLGMLHDDG 154 (202)
T ss_dssp HHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHHhcCCCCCCC
Confidence 67899999999999999865
No 62
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=66.87 E-value=4.6 Score=28.14 Aligned_cols=33 Identities=27% Similarity=0.517 Sum_probs=28.8
Q ss_pred CCCcccCCcccccCCcCccccccCCCCCCCCCC
Q 019784 294 LKGWSCKFCTLDNSSLSERCLACGEWRYSNGPP 326 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~Pp 326 (336)
...|.|..|--+|.+....|.-|-+.|..=-|+
T Consensus 11 ~D~WkC~~C~~~N~Pl~r~C~rCw~LRk~Wlp~ 43 (46)
T 2c6a_A 11 ADYWKCTSCNEMNPPLPSHCNRCWALRENWLPE 43 (46)
T ss_dssp GGCEECTTTCCEECSSCSSCTTTCCCCSSCSCC
T ss_pred cceEecccccccCCCccchhhHHHhhccccCCc
Confidence 368999999999999999999999998765554
No 63
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=66.52 E-value=2.9 Score=36.76 Aligned_cols=23 Identities=30% Similarity=0.261 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhcCcCCCchh
Q 019784 85 YEQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H~~~ 107 (336)
+..+-.||.|||.|+.-++||..
T Consensus 130 ~~~~a~~~AHElGH~lG~~HD~~ 152 (208)
T 4dd8_A 130 PVGVACTMAHEMGHNLGMDHDEN 152 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGG
T ss_pred hhHHHHHHHHHHHHHcCCcCCCC
Confidence 34456899999999999999853
No 64
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=66.51 E-value=2.2 Score=40.04 Aligned_cols=21 Identities=29% Similarity=0.107 Sum_probs=18.7
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||.|||.|+.-++||..
T Consensus 142 ~~a~t~AHElGHnlGm~HD~~ 162 (316)
T 2rjp_A 142 QSAFTAAHQLGHVFNMLHDNS 162 (316)
T ss_dssp THHHHHHHHHHHHTTCCCTTS
T ss_pred hHHHHHHHHHHhhcCccCCCC
Confidence 467899999999999999965
No 65
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=66.51 E-value=1.7 Score=33.72 Aligned_cols=42 Identities=17% Similarity=0.309 Sum_probs=22.4
Q ss_pred CCCccCCccccccccc--CccccccCCCCcCCCCCCCCcccCCccc
Q 019784 261 GQMWQCNMCTLLNQPL--ALTCEACGTQRNKSVGNLKGWSCKFCTL 304 (336)
Q Consensus 261 ~~~W~C~~CT~~N~~~--a~~C~aC~~~rp~~~~~~~~W~C~~CT~ 304 (336)
-..|.|..|.|+=.+. .....+.....-. .-+..|.|+.|..
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fe--dlPddW~CPvCga 68 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWD--DIPDDWSCPDCGA 68 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTT--TSCTTCCCTTTCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChh--HCCCCCcCCCCCC
Confidence 4579999999884432 1222222211100 2345688887764
No 66
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=65.43 E-value=5.3 Score=30.35 Aligned_cols=11 Identities=18% Similarity=0.477 Sum_probs=8.3
Q ss_pred CCCCCccCCcc
Q 019784 259 DVGQMWQCNMC 269 (336)
Q Consensus 259 ~~~~~W~C~~C 269 (336)
..+..|.|..|
T Consensus 17 ~~~~~W~C~~C 27 (77)
T 3shb_A 17 KDDVNRLCRVC 27 (77)
T ss_dssp TTCTTSCCTTT
T ss_pred CCCCCCCCCCC
Confidence 34467999988
No 67
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.26 E-value=14 Score=27.86 Aligned_cols=8 Identities=38% Similarity=1.165 Sum_probs=6.5
Q ss_pred CcccCCcc
Q 019784 296 GWSCKFCT 303 (336)
Q Consensus 296 ~W~C~~CT 303 (336)
.|.|+.|.
T Consensus 68 ~W~C~~C~ 75 (77)
T 2e6s_A 68 YWYCPSCK 75 (77)
T ss_dssp CCCCTTTC
T ss_pred CcCCcCcc
Confidence 78888885
No 68
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=64.39 E-value=2.1 Score=30.76 Aligned_cols=10 Identities=40% Similarity=1.384 Sum_probs=6.3
Q ss_pred CccCCccccc
Q 019784 263 MWQCNMCTLL 272 (336)
Q Consensus 263 ~W~C~~CT~~ 272 (336)
.|.|..|.++
T Consensus 3 ~y~C~~CGyv 12 (55)
T 2v3b_B 3 KWQCVVCGFI 12 (55)
T ss_dssp EEEETTTCCE
T ss_pred cEEeCCCCeE
Confidence 4666666665
No 69
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=61.83 E-value=3.8 Score=40.33 Aligned_cols=22 Identities=32% Similarity=0.224 Sum_probs=19.2
Q ss_pred HHHHHHHHhhhhhcCcCCCchh
Q 019784 86 EQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 86 ~~i~~vllHELaH~~~~~H~~~ 107 (336)
..+..||.|||.|+.-++||..
T Consensus 137 ~~~a~t~AHElGHnlGm~HD~~ 158 (427)
T 2e3x_A 137 FKTAVIMAHELSHNLGMYHDGK 158 (427)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCT
T ss_pred ceeeeehHHHHHHhhCCccCCC
Confidence 4567899999999999999865
No 70
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=61.78 E-value=3.1 Score=36.77 Aligned_cols=21 Identities=33% Similarity=0.351 Sum_probs=18.7
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||.|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGHnlG~~HD~~ 155 (214)
T 1r55_A 135 GAAATMAHEIGHSLGLSHDPD 155 (214)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHHHhcCCcCCCC
Confidence 457999999999999999864
No 71
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=60.87 E-value=6.8 Score=31.35 Aligned_cols=10 Identities=40% Similarity=1.079 Sum_probs=8.0
Q ss_pred CCCccCCccc
Q 019784 261 GQMWQCNMCT 270 (336)
Q Consensus 261 ~~~W~C~~CT 270 (336)
...|.|+.|.
T Consensus 53 ~~~W~C~~C~ 62 (112)
T 3v43_A 53 ALRWQCIECK 62 (112)
T ss_dssp TSCCCCTTTC
T ss_pred ccccccccCC
Confidence 4579999985
No 72
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=60.78 E-value=3.7 Score=40.44 Aligned_cols=23 Identities=30% Similarity=0.293 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhhhhcCcCCCchh
Q 019784 85 YEQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H~~~ 107 (336)
...+..||.|||.|+.-++||..
T Consensus 143 ~~~~a~t~AHElGHnlG~~HD~~ 165 (427)
T 2ero_A 143 HHLVAIAMAHEMGHNLGMDHDKD 165 (427)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCT
T ss_pred hhHHHHHHHHHHHHhcCCccCCC
Confidence 34667899999999999999865
No 73
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=60.17 E-value=7.3 Score=28.85 Aligned_cols=45 Identities=20% Similarity=0.412 Sum_probs=25.1
Q ss_pred CCCCccCCccc-----c-cccccCccccccCCCC------cC-CCCCCC-CcccCCccc
Q 019784 260 VGQMWQCNMCT-----L-LNQPLALTCEACGTQR------NK-SVGNLK-GWSCKFCTL 304 (336)
Q Consensus 260 ~~~~W~C~~CT-----~-~N~~~a~~C~aC~~~r------p~-~~~~~~-~W~C~~CT~ 304 (336)
....|.|..|. . .+....+.|+.|...- |. .....+ .|.|+.|..
T Consensus 10 ~~~~w~C~~C~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 10 DDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp TCTTSCCTTTSBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCCCeECCCCCCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 34579999772 1 1344455677765331 11 112245 899998863
No 74
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=59.81 E-value=3.9 Score=40.18 Aligned_cols=22 Identities=27% Similarity=0.223 Sum_probs=19.4
Q ss_pred HHHHHHHHhhhhhcCcCCCchh
Q 019784 86 EQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 86 ~~i~~vllHELaH~~~~~H~~~ 107 (336)
..+..||.|||.|+.-++||..
T Consensus 135 ~~~a~t~AHElGHnlG~~HD~~ 156 (419)
T 2dw0_A 135 LVVAVIMAHEMGHNLGINHDSG 156 (419)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCT
T ss_pred hhhhhhHHHHHHHHcCCccCCC
Confidence 4567899999999999999865
No 75
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=58.90 E-value=2.9 Score=36.71 Aligned_cols=11 Identities=27% Similarity=1.129 Sum_probs=8.7
Q ss_pred CccCCcccccc
Q 019784 263 MWQCNMCTLLN 273 (336)
Q Consensus 263 ~W~C~~CT~~N 273 (336)
.|.|..|.++=
T Consensus 155 ~~~C~~CG~~~ 165 (191)
T 1lko_A 155 KWRCRNCGYVH 165 (191)
T ss_dssp EEEETTTCCEE
T ss_pred eEEECCCCCEe
Confidence 68888888873
No 76
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=58.83 E-value=3.8 Score=33.02 Aligned_cols=10 Identities=40% Similarity=1.032 Sum_probs=7.5
Q ss_pred CCCccCCccc
Q 019784 261 GQMWQCNMCT 270 (336)
Q Consensus 261 ~~~W~C~~CT 270 (336)
...|.|+.|.
T Consensus 50 ~~~W~C~~C~ 59 (114)
T 2kwj_A 50 TYKWQCIECK 59 (114)
T ss_dssp HTTCCCGGGC
T ss_pred CCccCccccC
Confidence 3579988884
No 77
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=57.74 E-value=4 Score=28.95 Aligned_cols=24 Identities=25% Similarity=0.552 Sum_probs=17.5
Q ss_pred CcccCCcccccCCcCccccccCCC
Q 019784 296 GWSCKFCTLDNSSLSERCLACGEW 319 (336)
Q Consensus 296 ~W~C~~CT~~N~~~~~~C~~Cg~~ 319 (336)
...|+.|...|....|.|.-||..
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSSSC
T ss_pred CccCCCCCCcCCCCceecCCCCCc
Confidence 466777777777777777777765
No 78
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=57.41 E-value=9.3 Score=29.55 Aligned_cols=29 Identities=21% Similarity=0.429 Sum_probs=21.6
Q ss_pred CCcccCCcccccC-------------------CcCccccccCCCCCCC
Q 019784 295 KGWSCKFCTLDNS-------------------SLSERCLACGEWRYSN 323 (336)
Q Consensus 295 ~~W~C~~CT~~N~-------------------~~~~~C~~Cg~~R~~s 323 (336)
..|.|..|.|+=. +..|.|..|+.+|...
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K~~F 73 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDF 73 (81)
T ss_dssp CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCCGGGE
T ss_pred ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCCHHHc
Confidence 4688888887543 4578999999987643
No 79
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=56.28 E-value=11 Score=28.29 Aligned_cols=30 Identities=23% Similarity=0.305 Sum_probs=20.8
Q ss_pred CCcccCCcccccC-------------------CcCccccccCCCCCCCC
Q 019784 295 KGWSCKFCTLDNS-------------------SLSERCLACGEWRYSNG 324 (336)
Q Consensus 295 ~~W~C~~CT~~N~-------------------~~~~~C~~Cg~~R~~s~ 324 (336)
..|.|..|.|.=. +..|+|..|+.+|....
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga~K~~F~ 54 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPKNQFK 54 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCCBGGGEE
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCCCHHHce
Confidence 3678888876543 45678888888876544
No 80
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=56.25 E-value=21 Score=30.58 Aligned_cols=53 Identities=23% Similarity=0.329 Sum_probs=34.0
Q ss_pred CCccCCcccccccccCccccccCCCC------c-CCCCCCCCcccCCcccccCCc-Ccccccc
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQR------N-KSVGNLKGWSCKFCTLDNSSL-SERCLAC 316 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT~~N~~~-~~~C~~C 316 (336)
..+.|..|.- ....+.|+.|...- | ......+.|.|+.|.-.+.+. ...|..+
T Consensus 3 ~~~~C~~C~~--~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~~~~e~dc~~~ 63 (184)
T 3o36_A 3 NEDWCAVCQN--GGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPEVEYDCDAP 63 (184)
T ss_dssp SCSSCTTTCC--CSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSCSSCCGGGCC
T ss_pred CCCccccCCC--CCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccccccccccccc
Confidence 3477999983 34567899986431 1 111345689999999877654 3456544
No 81
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=56.06 E-value=4.5 Score=39.56 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhhhcCcCCCchh
Q 019784 86 EQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 86 ~~i~~vllHELaH~~~~~H~~~ 107 (336)
..+..||+|||.|+.-++||..
T Consensus 137 ~~~a~t~AHElGHnlGm~HD~~ 158 (397)
T 3k7n_A 137 SLVASTITHELGHNLGIHHDKA 158 (397)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCT
T ss_pred chhhhhHHHHHHHHcCCccCCC
Confidence 3567899999999999999864
No 82
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=55.97 E-value=4.5 Score=39.91 Aligned_cols=22 Identities=32% Similarity=0.302 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhhhcCcCCCchh
Q 019784 86 EQILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 86 ~~i~~vllHELaH~~~~~H~~~ 107 (336)
..+..||.|||.|+.-++||..
T Consensus 142 ~~~a~t~AHElGHnlGm~HD~~ 163 (422)
T 3k7l_A 142 RMVAITMAHEMGHNLGMNHDRG 163 (422)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCS
T ss_pred hhhhHHHHHHHHHHcCCccCCC
Confidence 3567899999999999999854
No 83
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=55.43 E-value=4.5 Score=31.78 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=22.7
Q ss_pred CCCCccCCccccccccc--CccccccCCCCcCCCCCCCCcccCCccc
Q 019784 260 VGQMWQCNMCTLLNQPL--ALTCEACGTQRNKSVGNLKGWSCKFCTL 304 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~--a~~C~aC~~~rp~~~~~~~~W~C~~CT~ 304 (336)
.-..|.|..|.|+=... .....+.....-. .-+..|.|+.|..
T Consensus 32 ~m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fe--dlPddW~CPvCga 76 (87)
T 1s24_A 32 AYLKWICITCGHIYDEALGDEAEGFTPGTRFE--DIPDDWCCPDCGA 76 (87)
T ss_dssp CCCEEEETTTTEEEETTSCCTTTTCCSCCCGG--GCCTTCCCSSSCC
T ss_pred CCceEECCCCCeEecCCcCCcccCcCCCCChh--HCCCCCCCCCCCC
Confidence 34679999999874332 1222222111000 2345788888764
No 84
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=54.94 E-value=5.3 Score=43.20 Aligned_cols=20 Identities=35% Similarity=0.529 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhhcCcCCC
Q 019784 85 YEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H 104 (336)
+..|..|+.|||||.++||-
T Consensus 292 ~~~i~~vIAHElAHQWFGNl 311 (889)
T 3ebh_A 292 YARILTVVGHEYFHQYTGNR 311 (889)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHHhcCe
Confidence 56788999999999999973
No 85
>1g12_A Peptidyl-Lys metalloendopeptidase; zinc cordinate,metalloprotease, hydrolase; HET: MAN; 1.60A {Grifola frondosa} SCOP: d.92.1.12 PDB: 1ge5_A* 1ge6_A* 1ge7_A*
Probab=54.80 E-value=3.9 Score=35.20 Aligned_cols=69 Identities=10% Similarity=-0.081 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhcCceeeeecccCCCCCCceeeecCCCc-EEEEEecCCCCCCCCCCHHHHHHHHHhhhhhcC
Q 019784 28 EKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINIGGGA-EVKLRLRRPNREWDFFPYEQILDTMLHELCHNE 100 (336)
Q Consensus 28 ~rlA~~v~pIM~~~~w~V~~L~Ef~P~~~~llG~N~N~G~-~I~LRLR~~~~~~~f~p~~~i~~vllHELaH~~ 100 (336)
.+|+..+.-|-.+.+-.+..-+. +.....++.-.-... +|.|--..=..+. .-...-..||||||+|+.
T Consensus 54 ~~V~~~f~~i~~~~~~~~~~~C~--C~~~~~~Ay~~p~~~~~i~~Cp~f~~~p~--~~~~s~a~tllHE~tH~~ 123 (167)
T 1g12_A 54 STVLQHYTDMNSNDFSSYSFDCT--CTAAGTFAYVYPNRFGTVYLCGAFWKAPT--TGTDSQAGTLVHESSHFT 123 (167)
T ss_dssp HHHHHHHHHHHTSCGGGCEEECC--CCCSSCCEECCTTSTTEEEECGGGGGSCS--SSTTCHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhccCCceeEeec--cCCCCcEEEEeCCCCCeEEECCchhcCCC--CCCCCchhhHHHhhhccc
Confidence 44555555555554433333333 222255665332111 4544322100000 112345899999999996
No 86
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=54.47 E-value=17 Score=28.36 Aligned_cols=48 Identities=17% Similarity=0.319 Sum_probs=31.9
Q ss_pred CCCCCCccCCcccccccccCccccccCCCC------cC-CCCCCCCcccCCcccccC
Q 019784 258 VDVGQMWQCNMCTLLNQPLALTCEACGTQR------NK-SVGNLKGWSCKFCTLDNS 307 (336)
Q Consensus 258 ~~~~~~W~C~~CT~~N~~~a~~C~aC~~~r------p~-~~~~~~~W~C~~CT~~N~ 307 (336)
......+.|..|.--. ..+.|+.|...- |. .....+.|.|+.|.....
T Consensus 20 ~~d~n~~~C~vC~~~g--~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~ 74 (88)
T 1fp0_A 20 TLDDSATICRVCQKPG--DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 74 (88)
T ss_dssp SSSSSSSCCSSSCSSS--CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred ccCCCCCcCcCcCCCC--CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCCc
Confidence 3445678999998654 567899986442 11 113457899999987654
No 87
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=52.97 E-value=5.9 Score=42.51 Aligned_cols=20 Identities=35% Similarity=0.423 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhhcCcCCC
Q 019784 85 YEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H 104 (336)
+..|..|+.|||+|.++||-
T Consensus 284 ~~~i~~vIaHElAHqWfGnl 303 (867)
T 2gtq_A 284 FEGIESVVGHEYFHNWTGNR 303 (867)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHhcCcE
Confidence 56788999999999999973
No 88
>1eb6_A Neutral protease II; metalloproteinase, zinc, hydrolase; 1.0A {Aspergillus oryzae} SCOP: d.92.1.12
Probab=52.88 E-value=4.6 Score=35.08 Aligned_cols=15 Identities=33% Similarity=0.357 Sum_probs=13.1
Q ss_pred HHHHHHHhhhhhcCc
Q 019784 87 QILDTMLHELCHNEY 101 (336)
Q Consensus 87 ~i~~vllHELaH~~~ 101 (336)
....||||||+|+..
T Consensus 121 ~~a~tllHE~tH~~~ 135 (177)
T 1eb6_A 121 DQATTTLHEFTHAPG 135 (177)
T ss_dssp CHHHHHHHHHHTCTT
T ss_pred cHHHHHHHHHHhhhh
Confidence 578999999999974
No 89
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=52.07 E-value=11 Score=31.54 Aligned_cols=80 Identities=21% Similarity=0.210 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceeeeecccCCC----CCCceeeecC------------CCcEEEEEecCCCCC--CCC
Q 019784 21 DDARQILEKVAKQVQPIMRKHKWKVRILSEFCPA----NPSLLGINIG------------GGAEVKLRLRRPNRE--WDF 82 (336)
Q Consensus 21 ~~A~~~L~rlA~~v~pIM~~~~w~V~~L~Ef~P~----~~~llG~N~N------------~G~~I~LRLR~~~~~--~~f 82 (336)
++...+.......+-+-++++==.|..+.|=+|. +..+||+-.. .+..|.|=-|.--+. ...
T Consensus 4 e~Fe~lv~~a~~~LP~~~~~~l~~V~i~Ved~p~~~~~~~~lLGly~g~~vpl~~r~~~~~P~~I~lYR~pi~~~~~~~e 83 (130)
T 2ejq_A 4 EAFVELVERLWEEVPEDFKRGLQGVHVFPEAKPEPGLEGVWRLGEYLDPGPPSAFGGFEDLGRHIALYYGSFLEVAGEGF 83 (130)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCCEEEEESSCCBCSSSTTCBCCEEEECCCSCBTTBCCGGGCCEEEEEHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHhhHHHHHHcCCcEEEEecCCCcccCCcceeeeccCCCcCccccccCCCCCEEEEehHHHHHHhCChh
Confidence 3444455555555555555433378877776643 2788999775 245666643321100 112
Q ss_pred CCHHHHHHHHHhhhhhcC
Q 019784 83 FPYEQILDTMLHELCHNE 100 (336)
Q Consensus 83 ~p~~~i~~vllHELaH~~ 100 (336)
---+.|..|++||++|..
T Consensus 84 eL~~~V~~tvvHEiaHhf 101 (130)
T 2ejq_A 84 DWEAEVWETMLHELRHHL 101 (130)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHH
Confidence 335679999999999965
No 90
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=50.92 E-value=24 Score=25.09 Aligned_cols=43 Identities=23% Similarity=0.412 Sum_probs=28.3
Q ss_pred CCCCccCCcccccccccCccccccCCCCc-------CCCCCCCCcccCCccc
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQRN-------KSVGNLKGWSCKFCTL 304 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~rp-------~~~~~~~~W~C~~CT~ 304 (336)
....+.|..|.-- ...+.|+.|...-- ......+.|.|+.|..
T Consensus 6 d~~~~~C~vC~~~--g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 55 (61)
T 1mm2_A 6 DHHMEFCRVCKDG--GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 55 (61)
T ss_dssp CSSCSSCTTTCCC--SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTT
T ss_pred cCCCCcCCCCCCC--CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcC
Confidence 3456889999753 35678999975521 1113357899999864
No 91
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=50.48 E-value=6.8 Score=41.35 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHhhhhhcCcCCC
Q 019784 83 FPYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 83 ~p~~~i~~vllHELaH~~~~~H 104 (336)
..+..+..|++|||||..+||-
T Consensus 254 ~~~~~~~~viaHElaHqWfGnl 275 (780)
T 1z5h_A 254 TVKRNSANVIAHEIAHQWFGDL 275 (780)
T ss_dssp HHHHHHHHHHHHHHHHTTBTTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCc
Confidence 3456788999999999999963
No 92
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=50.22 E-value=3.6 Score=42.07 Aligned_cols=19 Identities=21% Similarity=0.398 Sum_probs=16.2
Q ss_pred HHHHHHHHhhhhhcCcCCC
Q 019784 86 EQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 86 ~~i~~vllHELaH~~~~~H 104 (336)
..+..|++|||||..+||-
T Consensus 285 ~~~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 285 KSLSNVIAHEISHSWTGNL 303 (608)
T ss_dssp STTTHHHHHHHHTTTBTTT
T ss_pred chhHHHHHHHhhhhhhcCc
Confidence 4567899999999999975
No 93
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=49.99 E-value=7 Score=42.16 Aligned_cols=20 Identities=35% Similarity=0.395 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhhcCcCCC
Q 019784 85 YEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H 104 (336)
+..|..|+.|||+|.++||-
T Consensus 309 ~~~i~~vIAHElAHqWFGNl 328 (891)
T 3b34_A 309 YLDIERVIGHEYFHNWTGNR 328 (891)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 56788999999999999964
No 94
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=49.37 E-value=7.3 Score=41.84 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=19.3
Q ss_pred CCCHHHHHHHHHhhhhhcCcCCC
Q 019784 82 FFPYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 82 f~p~~~i~~vllHELaH~~~~~H 104 (336)
......|..|++|||||..+||-
T Consensus 310 ~~~~~~~~~viaHElAHqWFGnl 332 (909)
T 4fke_A 310 ISNKERVVTVIAHELAHQWFGNL 332 (909)
T ss_dssp HHHHHHHHHHHHHHHHTTTBTTT
T ss_pred hHHHHHHHHHHHHHHHhhhhcCe
Confidence 34556788999999999999975
No 95
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.86 E-value=11 Score=26.38 Aligned_cols=42 Identities=21% Similarity=0.468 Sum_probs=27.6
Q ss_pred CCCCccCCcccccccccCccccccCCCC------c-CCCCCCCCcccCCcc
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQR------N-KSVGNLKGWSCKFCT 303 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT 303 (336)
....+.|..|.-.+ ..+.|..|...- | ......+.|.|+.|.
T Consensus 6 ~~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKSG--QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCSS--CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCCCCCccCCCCC--eEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 44578899998754 556799887442 1 111334689998885
No 96
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=48.78 E-value=19 Score=25.68 Aligned_cols=45 Identities=18% Similarity=0.492 Sum_probs=29.9
Q ss_pred CCCCCccCCcccccccccCccccccCCCC------cC-CCCCCCCcccCCcccc
Q 019784 259 DVGQMWQCNMCTLLNQPLALTCEACGTQR------NK-SVGNLKGWSCKFCTLD 305 (336)
Q Consensus 259 ~~~~~W~C~~CT~~N~~~a~~C~aC~~~r------p~-~~~~~~~W~C~~CT~~ 305 (336)
.....+.|..|.-- ...+.|..|...- |. .....+.|.|+.|...
T Consensus 7 ~~~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC--CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 34567899999863 3566799987541 11 1134578999999764
No 97
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=48.74 E-value=6.2 Score=37.44 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=21.3
Q ss_pred CCCCCCCHHHHHHHHHhhhhhcCcCCC
Q 019784 78 REWDFFPYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 78 ~~~~f~p~~~i~~vllHELaH~~~~~H 104 (336)
+-..|.||..-++|+.|||+|=+.-..
T Consensus 128 dg~~f~~~~~~lDVv~HE~tHGVt~~~ 154 (301)
T 1bqb_A 128 DGRTFTNLSGANDVVAHEITHGVTQQT 154 (301)
T ss_dssp CSSSBSCGGGCHHHHHHHHHHHHHHHT
T ss_pred CCcccCCcccccceeeeecccceeccc
Confidence 334689999889999999999775543
No 98
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=48.63 E-value=7.6 Score=41.66 Aligned_cols=20 Identities=35% Similarity=0.408 Sum_probs=17.4
Q ss_pred CHHHHHHHHHhhhhhcCcCC
Q 019784 84 PYEQILDTMLHELCHNEYGP 103 (336)
Q Consensus 84 p~~~i~~vllHELaH~~~~~ 103 (336)
....|..|++|||||..+||
T Consensus 298 ~~~~~~~viaHElAHqWFGn 317 (897)
T 2xdt_A 298 SKLGITMTVAHELAHQWFGN 317 (897)
T ss_dssp HHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 34678899999999999997
No 99
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=48.38 E-value=12 Score=27.22 Aligned_cols=46 Identities=15% Similarity=0.304 Sum_probs=29.4
Q ss_pred CCCCccCCcccccccccCccccccCCCC------c-CCCCCCCCcccCCcccccC
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQR------N-KSVGNLKGWSCKFCTLDNS 307 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT~~N~ 307 (336)
....|.|..|.-- ...+.|+.|...- | ......+.|.|+.|...+.
T Consensus 5 ~~~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 5 QKNEDECAVCRDG--GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CSCCCSBSSSSCC--SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCCCccCCCC--CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 3467999999854 3567799886431 1 1113346899988875443
No 100
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=48.25 E-value=6.5 Score=37.42 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCc-----eeeeecccCCC--CCCceeeecCCCcEEEEEecCCCCCCCCCCHHHHHHHH
Q 019784 20 EDDARQILEKVAKQVQPIMRKHKW-----KVRILSEFCPA--NPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTM 92 (336)
Q Consensus 20 ~~~A~~~L~rlA~~v~pIM~~~~w-----~V~~L~Ef~P~--~~~llG~N~N~G~~I~LRLR~~~~~~~f~p~~~i~~vl 92 (336)
..+|...+.++-+..+-++....+ ++..-.=+ .. +.-+| .|+.+.+ = +.+-..|.||..-++|+
T Consensus 63 avdA~~~~~~t~d~y~~~~grnsid~~G~~l~~~VHy-g~~y~NAfW-----~g~~m~f--G-DGdg~~f~~~~~slDVv 133 (304)
T 4ger_A 63 GVDAHTYAAKTYDYYKAKFGRNSIDGRGLQLRSTVHY-GSRYNNAFW-----NGSQMTY--G-DGDGSTFIAFSGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTTTSSCCCEEEEEEE-SSSCCCEEE-----CSSCEEE--E-CCCSSSBCCGGGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCeEEEEEeC-CCCccCcee-----cCCEEEE--e-CCCCccccccccccchh
Confidence 445666777777777766666554 22221111 11 11111 2433222 1 22334789998889999
Q ss_pred HhhhhhcCcCCCc
Q 019784 93 LHELCHNEYGPHN 105 (336)
Q Consensus 93 lHELaH~~~~~H~ 105 (336)
.|||+|=+.-.+.
T Consensus 134 aHEltHGVt~~ta 146 (304)
T 4ger_A 134 GHELTHGVTEYTS 146 (304)
T ss_dssp HHHHHHHHHHTTT
T ss_pred hhccccccccccC
Confidence 9999998876653
No 101
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=48.21 E-value=11 Score=34.32 Aligned_cols=8 Identities=38% Similarity=1.240 Sum_probs=6.2
Q ss_pred CcccCCcc
Q 019784 296 GWSCKFCT 303 (336)
Q Consensus 296 ~W~C~~CT 303 (336)
.|.|+.|.
T Consensus 216 ~W~Cp~C~ 223 (226)
T 3ask_A 216 EWYCPECR 223 (226)
T ss_dssp CCCCGGGC
T ss_pred CCCCcCCc
Confidence 68888885
No 102
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=48.16 E-value=6.9 Score=33.90 Aligned_cols=27 Identities=22% Similarity=0.524 Sum_probs=20.2
Q ss_pred CcccCCcccccCCc-CccccccCCCCCC
Q 019784 296 GWSCKFCTLDNSSL-SERCLACGEWRYS 322 (336)
Q Consensus 296 ~W~C~~CT~~N~~~-~~~C~~Cg~~R~~ 322 (336)
.|.|+.|+|.-... -..|.+||.++..
T Consensus 138 ~~~C~~CG~i~~~~~p~~CP~Cg~~~~~ 165 (170)
T 3pwf_A 138 VYICPICGYTAVDEAPEYCPVCGAPKEK 165 (170)
T ss_dssp EEECTTTCCEEESCCCSBCTTTCCBGGG
T ss_pred eeEeCCCCCeeCCCCCCCCCCCCCCHHH
Confidence 69999999864433 3599999988753
No 103
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=47.12 E-value=13 Score=29.17 Aligned_cols=28 Identities=21% Similarity=0.386 Sum_probs=20.3
Q ss_pred CCcccCCccccc-------------------CCcCccccccCCCCCC
Q 019784 295 KGWSCKFCTLDN-------------------SSLSERCLACGEWRYS 322 (336)
Q Consensus 295 ~~W~C~~CT~~N-------------------~~~~~~C~~Cg~~R~~ 322 (336)
..|.|..|.|.= -+..|.|..|+.++..
T Consensus 34 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~K~~ 80 (87)
T 1s24_A 34 LKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKED 80 (87)
T ss_dssp CEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCCGGG
T ss_pred ceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCCCHHH
Confidence 468888887543 3457899999988753
No 104
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=46.33 E-value=9 Score=27.71 Aligned_cols=27 Identities=30% Similarity=0.454 Sum_probs=23.9
Q ss_pred CCCCccCCcccccccccCccccccCCC
Q 019784 260 VGQMWQCNMCTLLNQPLALTCEACGTQ 286 (336)
Q Consensus 260 ~~~~W~C~~CT~~N~~~a~~C~aC~~~ 286 (336)
....+.|-.|.-.|++.+..|.-|+..
T Consensus 16 ~~~k~ICrkC~ARnp~~A~~CRKCg~~ 42 (56)
T 2ayj_A 16 VFLKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp SCCCEEETTTCCEECTTCSSCTTTCCC
T ss_pred HhchhhhccccCcCCcccccccCCCCC
Confidence 346799999999999999999999865
No 105
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=46.28 E-value=8.3 Score=27.31 Aligned_cols=25 Identities=28% Similarity=0.550 Sum_probs=18.5
Q ss_pred CCccCCcccccccccCccccccCCC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQ 286 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~ 286 (336)
....|+.|...|+..+..|.-|+..
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 4577888888877777777777754
No 106
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=45.33 E-value=37 Score=24.76 Aligned_cols=40 Identities=20% Similarity=0.484 Sum_probs=25.7
Q ss_pred CccCCcccccccccCccccccCCCC------cC-CCCCCCCcccCCccc
Q 019784 263 MWQCNMCTLLNQPLALTCEACGTQR------NK-SVGNLKGWSCKFCTL 304 (336)
Q Consensus 263 ~W~C~~CT~~N~~~a~~C~aC~~~r------p~-~~~~~~~W~C~~CT~ 304 (336)
.-.|.+|. +....+.|..|...- |. .....+.|.|+.|+.
T Consensus 12 ~~~C~vC~--~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~ 58 (66)
T 2lri_C 12 GARCGVCG--DGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSG 58 (66)
T ss_dssp TCCCTTTS--CCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTT
T ss_pred CCCcCCCC--CCCeEEECCCCCCceecccCCCccCcCCCCCEECccccC
Confidence 35699996 344567899997442 11 113456899999964
No 107
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=45.11 E-value=7.3 Score=39.49 Aligned_cols=21 Identities=19% Similarity=0.067 Sum_probs=18.6
Q ss_pred HHHHHHHhhhhhcCcCCCchh
Q 019784 87 QILDTMLHELCHNEYGPHNAD 107 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~~ 107 (336)
.+..||+|||.|+.-++||..
T Consensus 133 ~~A~t~AHELGHnLGm~HD~~ 153 (510)
T 3g5c_A 133 LMAVTLAQSLAHNIGIISDKR 153 (510)
T ss_dssp HHHHHHHHHHHHHHTCCCCHH
T ss_pred hhhHHHHHHHHHHcCCccCCC
Confidence 467899999999999999864
No 108
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=44.47 E-value=14 Score=30.74 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=26.5
Q ss_pred Ccc---CCcccccccccCccccccCCCCcCCCCCCCCcccCCcccccCCcCccccccCC
Q 019784 263 MWQ---CNMCTLLNQPLALTCEACGTQRNKSVGNLKGWSCKFCTLDNSSLSERCLACGE 318 (336)
Q Consensus 263 ~W~---C~~CT~~N~~~a~~C~aC~~~rp~~~~~~~~W~C~~CT~~N~~~~~~C~~Cg~ 318 (336)
.|. |+.|.+.+..... .++.. ..+..|.|..|... ...|.|..||.
T Consensus 6 ~W~~e~~~~C~h~~~l~q~-------~~~~~-~~~~~~~C~~C~~~--~~LwlCL~CG~ 54 (129)
T 2g45_A 6 AWDGEVRQVSKHAFSLKQL-------DNPAR-IPPCGWKCSKCDMR--ENLWLNLTDGS 54 (129)
T ss_dssp -----CCEECTTTTTCCCC-------SSCCC-CCCCBCCCSSSSCC--SSEEEETTTCC
T ss_pred hhcCCCCCCCCCcCccccc-------ccccc-cCCCCCcCccccCc--CceEEeccCCc
Confidence 466 7778777643321 11111 22347889999765 36888988887
No 109
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=44.29 E-value=9.1 Score=31.16 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceeeeecccCCCCCCceeeec----------CCC---cEEEEEecCCCCC--CCCCCH
Q 019784 21 DDARQILEKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINI----------GGG---AEVKLRLRRPNRE--WDFFPY 85 (336)
Q Consensus 21 ~~A~~~L~rlA~~v~pIM~~~~w~V~~L~Ef~P~~~~llG~N~----------N~G---~~I~LRLR~~~~~--~~f~p~ 85 (336)
++...+.......+-+.+++.==.|..+.|=+|.++.+||+-. ..| .+|.|=-|.--+. ...-=.
T Consensus 8 e~Fd~lv~~a~~~Lp~~~~~~l~~v~i~Ved~P~~p~llgly~gvpL~~r~~~~~g~~p~rI~lYR~Pi~~~~~~~~el~ 87 (114)
T 3e11_A 8 DRFDELVAEALDGIPEEFARAMRNVAVFVEDEPDDPELLGLYVGIPLTERTTAYGGVLPDRIIIYRNTICALCETESEVI 87 (114)
T ss_dssp HHHHHHHHHHHHTSCGGGTGGGTTEEEEEESSCSSTTCSEEEECCCGGGSBCTTSCBCCEEEEEEHHHHHHTCSSHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHcCCcEEEEeCCCcCcccccCccCcCCccccCCCCCCCCCEEEEehHHHHHHhCChhHHH
Confidence 3344444444444444444333346666665566889999532 122 4555433221110 000114
Q ss_pred HHHHHHHHhhhhhcCc
Q 019784 86 EQILDTMLHELCHNEY 101 (336)
Q Consensus 86 ~~i~~vllHELaH~~~ 101 (336)
+.|..|++||++|..-
T Consensus 88 ~~V~~vvvhEiahh~G 103 (114)
T 3e11_A 88 DEVRKTVVHEIAHHFG 103 (114)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5678999999999753
No 110
>3khi_A Putative metal-dependent hydrolase; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=44.21 E-value=12 Score=34.89 Aligned_cols=90 Identities=14% Similarity=0.141 Sum_probs=44.7
Q ss_pred HHHH-HHHHHhhcCceeeeecc--cCCCC------------------CCceeeecCCCcEEEEEecCCCCCCCCCCHHHH
Q 019784 30 VAKQ-VQPIMRKHKWKVRILSE--FCPAN------------------PSLLGINIGGGAEVKLRLRRPNREWDFFPYEQI 88 (336)
Q Consensus 30 lA~~-v~pIM~~~~w~V~~L~E--f~P~~------------------~~llG~N~N~G~~I~LRLR~~~~~~~f~p~~~i 88 (336)
||++ +.|||.--.+...-+.| .||.. .-++|--+.+| .|-|.+..... .|.. .=
T Consensus 70 IAaqAcLpvL~l~~~~y~~~~~IlvYP~~f~~~~~~~d~~Gvvh~~~~~~~GEaw~~G-pVILSW~dv~~--g~~~--dg 144 (267)
T 3khi_A 70 IAMLFCLPVLELGIEWLDGFHEVLIYPAPFIVDDEWEDDIGLVHNQRVVQSGQSWQQG-PVVLNWLDIQD--SFDA--SG 144 (267)
T ss_dssp HHHHHHGGGTTTCGGGGTTCSEEEEESSCC----------CHHHHHHHTC-----CCS-CEEEEHHHHHH--HTSS--SS
T ss_pred HHHHHHHHHcCCCchHhCCCcEEEEeCcccccCceeecCCceeecccccccccccCCC-eEEEEHHHHhh--hccc--CC
Confidence 5554 88999766555555555 45642 12344444445 56666532110 0000 11
Q ss_pred HHHHHhhhhhcCcCCCch-----------hHHHHHHHHHHHHHHHHH
Q 019784 89 LDTMLHELCHNEYGPHNA-----------DFYKLWDEIRKECDELMA 124 (336)
Q Consensus 89 ~~vllHELaH~~~~~H~~-----------~F~~ll~~l~~e~~~l~~ 124 (336)
..|++||+||-..+..+. .......-+..+|+.|..
T Consensus 145 ~NvvIHEFAHkLD~~~G~~adG~PpL~~~~~~~W~~~~~~a~~~l~~ 191 (267)
T 3khi_A 145 FNLVVHEVAHKLDTRNGDRASGVPLIPLREVAGWEHDLHAAMNNIQD 191 (267)
T ss_dssp CCHHHHHHHHHHHTTTSCCCCSCCSCCGGGHHHHHHHHHHHHHHHHH
T ss_pred CchHHhHHHHHHHHhcCCccCCCCCCcccchHHHHHHHHHHHHHHHH
Confidence 279999999977655444 233333344555665543
No 111
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=43.73 E-value=8.3 Score=36.89 Aligned_cols=76 Identities=16% Similarity=0.194 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCc-----eeeeecccCCC--CCCceeeecCCCcEEEEEecCCCCCCCCCCHHHHHHHH
Q 019784 20 EDDARQILEKVAKQVQPIMRKHKW-----KVRILSEFCPA--NPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTM 92 (336)
Q Consensus 20 ~~~A~~~L~rlA~~v~pIM~~~~w-----~V~~L~Ef~P~--~~~llG~N~N~G~~I~LRLR~~~~~~~f~p~~~i~~vl 92 (336)
..+|...+.++-+..+-++....+ ++..-. .|.. +.-+| .|+.+.+ -+.|-..|.||-.-++|+
T Consensus 70 avdA~~~~~~t~d~y~~~~gr~sid~~G~~l~~~V-Hyg~~y~NAfW-----~g~~m~f---GDGdg~~f~~~~~slDVv 140 (316)
T 3dnz_A 70 AVDAHYYAGVTYDYYKNVHNRLSYDGNNAAIRSSV-HYSQGYNNAFW-----NGSQMVY---GDGDGQTFIPLSGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTTTSSCCCEEEEE-SCTTTCCCEEE-----CSSCEEE---CCCCSSSBSCGGGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCceEEEEE-ecCCCccCceE-----cCCEEEE---eCCCCcccccccccccce
Confidence 356677777777777777766655 222211 1111 11122 2443222 122334789998889999
Q ss_pred HhhhhhcCcCCC
Q 019784 93 LHELCHNEYGPH 104 (336)
Q Consensus 93 lHELaH~~~~~H 104 (336)
.|||+|=+...+
T Consensus 141 ~HE~tHgvt~~~ 152 (316)
T 3dnz_A 141 AHELTHAVTDYT 152 (316)
T ss_dssp HHHHHHHHHHHT
T ss_pred eeeecccccccc
Confidence 999999776554
No 112
>2lbz_A Thuricin17, thurincin H; helical loops, crosslinked, antimicrobial protein; HET: DSG 2TL DSN; NMR {Bacillus thuringiensis}
Probab=43.66 E-value=9.5 Score=23.73 Aligned_cols=17 Identities=41% Similarity=1.146 Sum_probs=11.7
Q ss_pred CccCCcccccccccCccccccCCCC
Q 019784 263 MWQCNMCTLLNQPLALTCEACGTQR 287 (336)
Q Consensus 263 ~W~C~~CT~~N~~~a~~C~aC~~~r 287 (336)
.|+|-.| +.|.+|..+-
T Consensus 1 dwtcwsc--------lvcaacsvel 17 (31)
T 2lbz_A 1 DWTCWSC--------LVCAACSVEL 17 (31)
T ss_dssp CCCTTGG--------GGGGGCCSCS
T ss_pred CccHHHH--------HHHHHhHHHH
Confidence 3888877 4588887653
No 113
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=42.94 E-value=7.7 Score=34.00 Aligned_cols=10 Identities=30% Similarity=0.833 Sum_probs=6.8
Q ss_pred CccccccCCC
Q 019784 277 ALTCEACGTQ 286 (336)
Q Consensus 277 a~~C~aC~~~ 286 (336)
.-.|..||-.
T Consensus 155 ~~~C~~CG~~ 164 (191)
T 1lko_A 155 KWRCRNCGYV 164 (191)
T ss_dssp EEEETTTCCE
T ss_pred eEEECCCCCE
Confidence 3468888855
No 114
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=42.79 E-value=16 Score=28.72 Aligned_cols=46 Identities=22% Similarity=0.571 Sum_probs=30.9
Q ss_pred CccCCcccccccccCccccccCCCCcC----------C---------CCCCCCcccCCcccccCC
Q 019784 263 MWQCNMCTLLNQPLALTCEACGTQRNK----------S---------VGNLKGWSCKFCTLDNSS 308 (336)
Q Consensus 263 ~W~C~~CT~~N~~~a~~C~aC~~~rp~----------~---------~~~~~~W~C~~CT~~N~~ 308 (336)
.=.|.+|-..-...-..|..|+..--. . .....+|+|..|-..|.-
T Consensus 15 D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~lL 79 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLL 79 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCCSS
T ss_pred CcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhhhh
Confidence 446888876655566679999865210 0 034678999999777753
No 115
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=42.66 E-value=16 Score=26.89 Aligned_cols=47 Identities=19% Similarity=0.462 Sum_probs=30.4
Q ss_pred CCCCCccCCcccccccc-cCccccccCCCC------cCCC-CCCCCcccCCcccc
Q 019784 259 DVGQMWQCNMCTLLNQP-LALTCEACGTQR------NKSV-GNLKGWSCKFCTLD 305 (336)
Q Consensus 259 ~~~~~W~C~~CT~~N~~-~a~~C~aC~~~r------p~~~-~~~~~W~C~~CT~~ 305 (336)
.....|.|..|.-.... .-+.|+.|..-- +... ...+.|.|+.|...
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 34567999999876544 456799996331 1111 22468999999754
No 116
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=41.44 E-value=12 Score=40.75 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=17.4
Q ss_pred CHHHHHHHHHhhhhhcCcCC
Q 019784 84 PYEQILDTMLHELCHNEYGP 103 (336)
Q Consensus 84 p~~~i~~vllHELaH~~~~~ 103 (336)
....+..|++|||||..+||
T Consensus 360 ~k~~~~~vIaHElAHqWFGn 379 (967)
T 3se6_A 360 DKLWVTRVIAHELAHQWFGN 379 (967)
T ss_dssp HHHHHHHHHHHHHGGGTBTT
T ss_pred hhHhHHHHHHHHHHHHHhcC
Confidence 34568899999999999997
No 117
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=40.40 E-value=23 Score=31.04 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=32.1
Q ss_pred CCccCCcccccccccCccccccCCCC------c-CCCCCCCCcccCCcccccCCc-CccccccCC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQR------N-KSVGNLKGWSCKFCTLDNSSL-SERCLACGE 318 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT~~N~~~-~~~C~~Cg~ 318 (336)
..+.|..|.-- ...+.|..|...- | ......+.|.|+.|.-..... ...|..+..
T Consensus 6 ~~~~C~~C~~~--g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~~~~~~~c~~~~~ 68 (207)
T 3u5n_A 6 NEDWCAVCQNG--GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDNLQH 68 (207)
T ss_dssp SCSSBTTTCCC--EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSCSSCCSCC----
T ss_pred CCCCCCCCCCC--CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccccccccccccccc
Confidence 45779999733 3466799886431 1 111345789999998655443 345665553
No 118
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=40.16 E-value=11 Score=30.80 Aligned_cols=25 Identities=36% Similarity=0.663 Sum_probs=17.3
Q ss_pred CCCcccCCcccccCCcCc-------cccccCC
Q 019784 294 LKGWSCKFCTLDNSSLSE-------RCLACGE 318 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~-------~C~~Cg~ 318 (336)
...-.|..|.....+.|. .|-+||-
T Consensus 57 ~~~~~C~~C~t~~tp~WRr~~~g~~lCNaCgl 88 (115)
T 4hc9_A 57 RAGTSCANCQTTTTTLWRRNANGDPVCNACGL 88 (115)
T ss_dssp CTTCCCTTTCCSCCSSCEECTTSCEECHHHHH
T ss_pred cccccCCCcCCCCcceeEECCCCCCcchHHHH
Confidence 345678888877766654 7888874
No 119
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=40.09 E-value=16 Score=26.02 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=16.7
Q ss_pred cCccccccCCCCcCCCCCCCCcccCCccccc
Q 019784 276 LALTCEACGTQRNKSVGNLKGWSCKFCTLDN 306 (336)
Q Consensus 276 ~a~~C~aC~~~rp~~~~~~~~W~C~~CT~~N 306 (336)
....|..|+..........+.+.|..|.+.=
T Consensus 10 ~~~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 10 PRVTCPNHPDAILVEDYRAGDMICPECGLVV 40 (58)
T ss_dssp SCCSBTTBSSSCCEECSSSCCEECTTTCCEE
T ss_pred ccccCcCCCCCceeEeCCCCeEEeCCCCCEE
Confidence 3345666665332222345667777776543
No 120
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=40.07 E-value=12 Score=26.83 Aligned_cols=48 Identities=19% Similarity=0.544 Sum_probs=31.1
Q ss_pred CCCccCCccccc---ccccCccccccCCCC------cCCC----CCCCCcccCCcccccCC
Q 019784 261 GQMWQCNMCTLL---NQPLALTCEACGTQR------NKSV----GNLKGWSCKFCTLDNSS 308 (336)
Q Consensus 261 ~~~W~C~~CT~~---N~~~a~~C~aC~~~r------p~~~----~~~~~W~C~~CT~~N~~ 308 (336)
.....|.+|.-- +....+.|..|...- |... ...+.|.|+.|...+..
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~ 64 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTT 64 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcccc
Confidence 346889999865 335567799987542 1111 14578999999876543
No 121
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=38.56 E-value=11 Score=33.31 Aligned_cols=10 Identities=30% Similarity=0.634 Sum_probs=6.7
Q ss_pred CccccccCCC
Q 019784 277 ALTCEACGTQ 286 (336)
Q Consensus 277 a~~C~aC~~~ 286 (336)
.-.|..||-.
T Consensus 171 ~~~C~~CG~i 180 (202)
T 1yuz_A 171 FHLCPICGYI 180 (202)
T ss_dssp EEECSSSCCE
T ss_pred EEEECCCCCE
Confidence 3468888755
No 122
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=35.94 E-value=16 Score=32.29 Aligned_cols=20 Identities=30% Similarity=0.370 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhhhhcCcCCC
Q 019784 85 YEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H 104 (336)
...+..+|+|||.|+.-..|
T Consensus 136 ~~r~~~~~~HElGH~lGl~H 155 (195)
T 2x7m_A 136 LERVVKELTHELGHTFGLGH 155 (195)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhhcCCCC
Confidence 34577999999999999999
No 123
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=34.62 E-value=6.6 Score=30.41 Aligned_cols=34 Identities=24% Similarity=0.621 Sum_probs=21.1
Q ss_pred ccccccCCCCcCCCCCCCCcccCCcccccCCcCcc
Q 019784 278 LTCEACGTQRNKSVGNLKGWSCKFCTLDNSSLSER 312 (336)
Q Consensus 278 ~~C~aC~~~rp~~~~~~~~W~C~~CT~~N~~~~~~ 312 (336)
-.|..|+...-.. ...+.|.|+.|.......++.
T Consensus 28 y~Cp~CG~~~v~r-~atGiW~C~~Cg~~~aggay~ 61 (83)
T 1vq8_Z 28 HACPNCGEDRVDR-QGTGIWQCSYCDYKFTGGSYK 61 (83)
T ss_dssp EECSSSCCEEEEE-EETTEEEETTTCCEEECCSSS
T ss_pred CcCCCCCCcceec-cCCCeEECCCCCCEecCCEec
Confidence 3577777542211 224689999999876665443
No 124
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=34.47 E-value=18 Score=32.67 Aligned_cols=21 Identities=24% Similarity=0.140 Sum_probs=19.2
Q ss_pred HHHHHHHHHhhhhhcCcCCCc
Q 019784 85 YEQILDTMLHELCHNEYGPHN 105 (336)
Q Consensus 85 ~~~i~~vllHELaH~~~~~H~ 105 (336)
.+.|..+++|||.|+.-.+|-
T Consensus 140 ~~Rv~k~~~HElGH~lGL~HC 160 (210)
T 3lmc_A 140 IDRIVKEGAHEIGHLFGLGHC 160 (210)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCC
Confidence 678999999999999999994
No 125
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=33.77 E-value=14 Score=37.92 Aligned_cols=16 Identities=38% Similarity=0.553 Sum_probs=14.6
Q ss_pred HHHHHHhhhhhcCcCC
Q 019784 88 ILDTMLHELCHNEYGP 103 (336)
Q Consensus 88 i~~vllHELaH~~~~~ 103 (336)
+..|++|||||.++||
T Consensus 295 ~~~viaHElAHqWfGn 310 (632)
T 2xq0_A 295 NIDVIAHELAHSWSGN 310 (632)
T ss_dssp STHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5689999999999997
No 126
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=33.75 E-value=36 Score=25.69 Aligned_cols=32 Identities=25% Similarity=0.638 Sum_probs=20.7
Q ss_pred ccccccCCCCcCCCCCCCCcccCCcccccCCcC
Q 019784 278 LTCEACGTQRNKSVGNLKGWSCKFCTLDNSSLS 310 (336)
Q Consensus 278 ~~C~aC~~~rp~~~~~~~~W~C~~CT~~N~~~~ 310 (336)
..|..|+..+-+. ...+.|.|..|...-...+
T Consensus 27 y~C~fCgk~~vkR-~a~GIW~C~~C~~~~AGGA 58 (72)
T 3jyw_9 27 YDCSFCGKKTVKR-GAAGIWTCSCCKKTVAGGA 58 (72)
T ss_dssp BCCSSCCSSCBSB-CSSSCBCCSSSCCCCCCSS
T ss_pred ccCCCCCCceeEe-cCCCeEECCCCCCEEeCCc
Confidence 4578887654332 2357899999987655443
No 127
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=33.64 E-value=14 Score=37.59 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=15.0
Q ss_pred HHHHHHHhhhhhcCcCC
Q 019784 87 QILDTMLHELCHNEYGP 103 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~ 103 (336)
.+..|++|||||.+.||
T Consensus 293 ~~~~viaHElaHqWfGn 309 (605)
T 3cia_A 293 SLVNLIAHELAHSWSGN 309 (605)
T ss_dssp CSTHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 35689999999999997
No 128
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=33.06 E-value=23 Score=25.01 Aligned_cols=43 Identities=19% Similarity=0.373 Sum_probs=28.0
Q ss_pred CCccCCcccccccccCccccccCCCC------c-CCCCCCCCcccCCccccc
Q 019784 262 QMWQCNMCTLLNQPLALTCEACGTQR------N-KSVGNLKGWSCKFCTLDN 306 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT~~N 306 (336)
..+.|..|.-.+ ..+.|..|...- | ......+.|.|+.|....
T Consensus 4 ~~~~C~vC~~~g--~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRKSG--QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCCCS--SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCCCC--cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 468899998653 566799887442 1 111335689999997543
No 129
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=32.63 E-value=23 Score=27.28 Aligned_cols=48 Identities=19% Similarity=0.442 Sum_probs=32.9
Q ss_pred CCCCccCCccccc---ccccCccccccCCCC------cCCCCCCCCcccCCcccccCC
Q 019784 260 VGQMWQCNMCTLL---NQPLALTCEACGTQR------NKSVGNLKGWSCKFCTLDNSS 308 (336)
Q Consensus 260 ~~~~W~C~~CT~~---N~~~a~~C~aC~~~r------p~~~~~~~~W~C~~CT~~N~~ 308 (336)
.+..+.|.+|.-. +....+.|+.|...- |.. ...+.|.|+.|...+..
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~-vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-IPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS-CCSSCCCCHHHHHHTTS
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc-cCCCceECccccCccch
Confidence 3456899999864 455667899997542 111 34578999999876544
No 130
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=31.63 E-value=14 Score=35.74 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=18.8
Q ss_pred CCCCHHHHHHHHHhhhhhcCcCCC
Q 019784 81 DFFPYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 81 ~f~p~~~i~~vllHELaH~~~~~H 104 (336)
.|.+|..-++|+.|||+|=|....
T Consensus 149 ~f~~~~~~lDVv~HEltHGVt~~~ 172 (341)
T 2vqx_A 149 IFNRFTIAIDVVGHALAHGVTESE 172 (341)
T ss_dssp SBCCTTSCHHHHHHHHHHHHHHHT
T ss_pred ccCCcccchhhhhhhcccceeccc
Confidence 567777778999999999775543
No 131
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=31.32 E-value=51 Score=33.70 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=17.8
Q ss_pred CHHHHHHHHHhhhhhcCcCCC
Q 019784 84 PYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 84 p~~~i~~vllHELaH~~~~~H 104 (336)
-+..++.++.||++|.+.++-
T Consensus 263 ~~~~~~~liaHE~~H~W~g~~ 283 (597)
T 4fgm_A 263 NYQTFLSLCCHEYFHSWNIKT 283 (597)
T ss_dssp HHHHHHHHHHHHHHHTTBTTT
T ss_pred hhhchhhhHhhhhheeecccc
Confidence 356789999999999999853
No 132
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=30.63 E-value=36 Score=22.95 Aligned_cols=38 Identities=18% Similarity=0.529 Sum_probs=22.7
Q ss_pred CCcccccc-cccCccccccCCCC------c-CCCCCCCCcccCCcc
Q 019784 266 CNMCTLLN-QPLALTCEACGTQR------N-KSVGNLKGWSCKFCT 303 (336)
Q Consensus 266 C~~CT~~N-~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT 303 (336)
|..|.... ....+.|+.|...- | ......+.|.|+.|.
T Consensus 3 C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~ 48 (51)
T 1f62_A 3 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQ 48 (51)
T ss_dssp CTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTS
T ss_pred CCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcc
Confidence 66776543 34456788886441 1 111334689999985
No 133
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.23 E-value=40 Score=26.02 Aligned_cols=46 Identities=20% Similarity=0.451 Sum_probs=29.5
Q ss_pred CCCCccCCcccccc-cccCccccccCCCC------c-CCCCCCCCcccCCcccc
Q 019784 260 VGQMWQCNMCTLLN-QPLALTCEACGTQR------N-KSVGNLKGWSCKFCTLD 305 (336)
Q Consensus 260 ~~~~W~C~~CT~~N-~~~a~~C~aC~~~r------p-~~~~~~~~W~C~~CT~~ 305 (336)
....+.|.+|.-.. ....+.|+.|...- | ......+.|.|+.|...
T Consensus 13 ~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 34567899998665 34466799886431 1 11134578999999754
No 134
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=29.00 E-value=24 Score=25.49 Aligned_cols=26 Identities=19% Similarity=0.383 Sum_probs=23.4
Q ss_pred CCCcccCCcccccCCcCccccccCCC
Q 019784 294 LKGWSCKFCTLDNSSLSERCLACGEW 319 (336)
Q Consensus 294 ~~~W~C~~CT~~N~~~~~~C~~Cg~~ 319 (336)
...+.|-.|...|++.+..|--||..
T Consensus 17 ~~k~ICrkC~ARnp~~A~~CRKCg~~ 42 (56)
T 2ayj_A 17 FLKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp CCCEEETTTCCEECTTCSSCTTTCCC
T ss_pred hchhhhccccCcCCcccccccCCCCC
Confidence 35799999999999999999999964
No 135
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=27.83 E-value=37 Score=24.75 Aligned_cols=32 Identities=31% Similarity=0.478 Sum_probs=21.0
Q ss_pred cccCCcccccCCcCccccccCCCCCCCC-CCCCCC
Q 019784 297 WSCKFCTLDNSSLSERCLACGEWRYSNG-PPISTP 330 (336)
Q Consensus 297 W~C~~CT~~N~~~~~~C~~Cg~~R~~s~-Pp~~~~ 330 (336)
-.|+.|...-- ...|..||.+-.+.- |.-+|+
T Consensus 7 r~C~~CgvYTL--k~~CP~CG~~T~~~hParfSp~ 39 (60)
T 2apo_B 7 KKCPKCGLYTL--KEICPKCGEKTVIPKPPKFSLE 39 (60)
T ss_dssp EECTTTCCEES--SSBCSSSCSBCBCCCCCCCCTT
T ss_pred eeCCCCCCEec--cccCcCCCCcCCCCCCCCCCCC
Confidence 45777764444 677999999876544 445554
No 136
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=26.97 E-value=35 Score=25.21 Aligned_cols=45 Identities=20% Similarity=0.462 Sum_probs=29.7
Q ss_pred CCCCccCCccccc---ccccCccccccCCCC------cCCCCCCCCcccCCcccc
Q 019784 260 VGQMWQCNMCTLL---NQPLALTCEACGTQR------NKSVGNLKGWSCKFCTLD 305 (336)
Q Consensus 260 ~~~~W~C~~CT~~---N~~~a~~C~aC~~~r------p~~~~~~~~W~C~~CT~~ 305 (336)
......|.+|.-. +....+.|+.|...- |.. ...+.|.|+.|...
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~-vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY-IPEGQWLCRHCLQS 66 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS-CCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc-CCCCCcCCccCcCc
Confidence 3456789999754 455667899997541 111 34578999999753
No 137
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=26.61 E-value=18 Score=34.69 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=13.2
Q ss_pred HHHHHHHHhhhhhcCc
Q 019784 86 EQILDTMLHELCHNEY 101 (336)
Q Consensus 86 ~~i~~vllHELaH~~~ 101 (336)
..-..||||||+|+..
T Consensus 285 ~s~a~tllHE~tH~~~ 300 (343)
T 2x3c_A 285 DSRAGTIVHQLSHFNV 300 (343)
T ss_dssp TCHHHHHHHHHHHSTT
T ss_pred CccchhHhhhhhcccc
Confidence 4577999999999863
No 138
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.08 E-value=1.3e+02 Score=21.19 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=30.8
Q ss_pred CCCCCccCCccccc--ccccCccccccCCCCcCCCCCCCCcccCCcccccCCcCccccccCCCCCCCC
Q 019784 259 DVGQMWQCNMCTLL--NQPLALTCEACGTQRNKSVGNLKGWSCKFCTLDNSSLSERCLACGEWRYSNG 324 (336)
Q Consensus 259 ~~~~~W~C~~CT~~--N~~~a~~C~aC~~~rp~~~~~~~~W~C~~CT~~N~~~~~~C~~Cg~~R~~s~ 324 (336)
.......|+.|.-. +... ..-..|+ ..-|..|...-......|.+|...-....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~-~~~~~C~-----------H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 11 HVGSGLECPVCKEDYALGES-VRQLPCN-----------HLFHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp TSSSSCCCTTTTSCCCTTSC-EEECTTS-----------CEEETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred cCCCCCCCeeCCccccCCCC-EEEeCCC-----------CeecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 34457889999533 2211 1111244 45677776544444578999988765543
No 139
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=23.40 E-value=20 Score=25.88 Aligned_cols=17 Identities=35% Similarity=0.827 Sum_probs=13.6
Q ss_pred CCCccCCcccccccccC
Q 019784 261 GQMWQCNMCTLLNQPLA 277 (336)
Q Consensus 261 ~~~W~C~~CT~~N~~~a 277 (336)
...|.|+.|...|....
T Consensus 31 ~~~W~C~~C~~~N~~P~ 47 (59)
T 2yrc_A 31 AKLWACNFCYQRNQFPP 47 (59)
T ss_dssp GTEEECSSSCCEEECCS
T ss_pred CCEEEcccCCCcCCCCH
Confidence 35799999999997643
No 140
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=23.08 E-value=23 Score=37.57 Aligned_cols=23 Identities=17% Similarity=0.573 Sum_probs=20.3
Q ss_pred CCccCCcccccccccCccccccC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACG 284 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~ 284 (336)
..|.|..|...|+....+|..|+
T Consensus 10 ~~~~c~yc~~~~~~~~~~c~~~~ 32 (802)
T 2xzl_A 10 SDNSCAYCGIDSAKCVIKCNSCK 32 (802)
T ss_dssp --CCCTTTCCCCTTTEEEETTTC
T ss_pred ChhhCcccCCCCCceEEEeCCCC
Confidence 56999999999999999999997
No 141
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=22.89 E-value=29 Score=23.47 Aligned_cols=10 Identities=20% Similarity=0.451 Sum_probs=4.8
Q ss_pred CCcccCCccc
Q 019784 295 KGWSCKFCTL 304 (336)
Q Consensus 295 ~~W~C~~CT~ 304 (336)
+.+.|..|.+
T Consensus 23 gelvC~~CG~ 32 (50)
T 1pft_A 23 GEIVCAKCGY 32 (50)
T ss_dssp TEEEESSSCC
T ss_pred CeEECcccCC
Confidence 3455555544
No 142
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=22.30 E-value=23 Score=37.65 Aligned_cols=23 Identities=13% Similarity=0.546 Sum_probs=21.3
Q ss_pred CCccCCcccccccccCccccccC
Q 019784 262 QMWQCNMCTLLNQPLALTCEACG 284 (336)
Q Consensus 262 ~~W~C~~CT~~N~~~a~~C~aC~ 284 (336)
..|.|..|...|+....+|..|+
T Consensus 5 ~~~~c~~c~~~~~~~~~~~~~~~ 27 (800)
T 2wjy_A 5 PIHACSYCGIHDPACVVYCNTSK 27 (800)
T ss_dssp CTTSCTTTCCCCGGGEEEETTTT
T ss_pred CchhccccCCCCCCeEEEcCCCC
Confidence 46999999999999999999996
No 143
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=21.70 E-value=37 Score=28.64 Aligned_cols=20 Identities=25% Similarity=0.245 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhhcCcCCCch
Q 019784 87 QILDTMLHELCHNEYGPHNA 106 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~ 106 (336)
.+..|++|||-|..--.|..
T Consensus 110 ~~~~v~~HEiGHaLGL~H~~ 129 (168)
T 1cge_A 110 NLHRVAAHELGHSLGLSHST 129 (168)
T ss_dssp BHHHHHHHHHHHHTTCCCCS
T ss_pred chhhhhhhHhHhhhcCCCCC
Confidence 36899999999999889975
No 144
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=21.63 E-value=32 Score=28.51 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=17.3
Q ss_pred HHHHHHHhhhhhcCcCCCch
Q 019784 87 QILDTMLHELCHNEYGPHNA 106 (336)
Q Consensus 87 ~i~~vllHELaH~~~~~H~~ 106 (336)
.+..|++|||-|..--.|..
T Consensus 107 ~~~~v~~HEiGHaLGL~H~~ 126 (160)
T 2jsd_A 107 NLFTVAAHEFGHALGLAHST 126 (160)
T ss_dssp EHHHHHHHHHHHHHTCCCCC
T ss_pred hhHHHHHHHhHhhhcCCCCC
Confidence 46899999999999888865
No 145
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=20.99 E-value=31 Score=32.65 Aligned_cols=24 Identities=29% Similarity=0.398 Sum_probs=18.5
Q ss_pred CCCCCHHHHHHHHHhhhhhcCcCCC
Q 019784 80 WDFFPYEQILDTMLHELCHNEYGPH 104 (336)
Q Consensus 80 ~~f~p~~~i~~vllHELaH~~~~~H 104 (336)
..|.|+. -++|+.|||+|=+....
T Consensus 127 ~~~~p~~-~lDVv~HE~tHGVt~~~ 150 (301)
T 1u4g_A 127 TMFYPLV-SLDVAAHEVSHGFTEQN 150 (301)
T ss_dssp SSBSCSC-CHHHHHHHHHHHHHHTT
T ss_pred ccccccc-ccceeeeccccceeccc
Confidence 3577874 68999999999776554
No 146
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=20.76 E-value=76 Score=23.08 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=19.7
Q ss_pred cccCCcccccCCcCccccccCCCCCC-CCCCCCCC
Q 019784 297 WSCKFCTLDNSSLSERCLACGEWRYS-NGPPISTP 330 (336)
Q Consensus 297 W~C~~CT~~N~~~~~~C~~Cg~~R~~-s~Pp~~~~ 330 (336)
-.|+.|...-- ...|..||.+-.+ +++..+|+
T Consensus 6 r~C~~Cg~YTL--k~~CP~CG~~t~~ahParfSP~ 38 (60)
T 2aus_D 6 RKCPKCGRYTL--KETCPVCGEKTKVAHPPRFSPE 38 (60)
T ss_dssp EECTTTCCEES--SSBCTTTCSBCEESSCCCCCSC
T ss_pred eECCCCCCEEc--cccCcCCCCccCCCCCCCCCCC
Confidence 35777764443 5678888887654 34455554
No 147
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=20.39 E-value=30 Score=32.84 Aligned_cols=73 Identities=15% Similarity=0.201 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCceeeeecccCCCCCCceeeecC----CCcEEEEEecCCCCCCCCCCHHHHHHHHHhhh
Q 019784 21 DDARQILEKVAKQVQPIMRKHKWKVRILSEFCPANPSLLGINIG----GGAEVKLRLRRPNREWDFFPYEQILDTMLHEL 96 (336)
Q Consensus 21 ~~A~~~L~rlA~~v~pIM~~~~w~V~~L~Ef~P~~~~llG~N~N----~G~~I~LRLR~~~~~~~f~p~~~i~~vllHEL 96 (336)
-+|.-....+-+..+-++.+..+...+..= --.|.|.+ .|+.+.+ -. . +..|.|+. -++|+.|||
T Consensus 75 ~DAhy~a~~t~d~y~~~~gr~~id~~l~~~------VHyg~~y~NAfWdg~~m~f--GD-G-~~~~~~~~-slDVv~HE~ 143 (306)
T 3nqx_A 75 NDAHFFGNVIFNMYNDWLGTAPLSFQLQMR------VHYSSNYENAFWDGSAMTF--GD-G-QNTFYPLV-SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSSCEEEE------EEESSSCCCEEECSSCEEE--EC-C-CSSBSCSC-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCceEEE------EecCCCccCccccCCEEEE--eC-C-Cccccccc-ccchhhhhh
Confidence 445555555555566666665553211100 00133322 2554333 22 2 23578875 689999999
Q ss_pred hhcCcCCC
Q 019784 97 CHNEYGPH 104 (336)
Q Consensus 97 aH~~~~~H 104 (336)
+|=+...+
T Consensus 144 tHGvt~~~ 151 (306)
T 3nqx_A 144 SHGFTEQN 151 (306)
T ss_dssp HHHHHHTT
T ss_pred ccccccCC
Confidence 99887654
No 148
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=20.05 E-value=64 Score=34.44 Aligned_cols=47 Identities=19% Similarity=0.278 Sum_probs=26.1
Q ss_pred CCcc---CCcccccccccCccccccCCCCcCCCCCCCCcccCCcccccCCcCccccccCC
Q 019784 262 QMWQ---CNMCTLLNQPLALTCEACGTQRNKSVGNLKGWSCKFCTLDNSSLSERCLACGE 318 (336)
Q Consensus 262 ~~W~---C~~CT~~N~~~a~~C~aC~~~rp~~~~~~~~W~C~~CT~~N~~~~~~C~~Cg~ 318 (336)
..|. |+.|...+..... +.+.. ..+..|.|..|.... .+|.|..||.
T Consensus 186 ~~w~~~~~~~c~h~~~~~~~-------~~~~~-~~~~~~~C~~c~~~~--~lw~CL~Cg~ 235 (854)
T 3ihp_A 186 QAWDGEVRQVSKHAFSLKQL-------DNPAR-IPPCGWKCSKCDMRE--NLWLNLTDGS 235 (854)
T ss_dssp ------CCCBCTTTTTCCCC-------SSCCC-CCSSCCCCSSSCCCS--SEEEETTTCC
T ss_pred HhhcCccCCCCcCccccccc-------ccccc-CCCCCCcCcCcCCcC--ceEEEecCCC
Confidence 5687 8888877643211 10111 123468999998654 7788888884
Done!