Query 019785
Match_columns 336
No_of_seqs 217 out of 735
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 07:03:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019785.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019785hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1uuj_A Platelet-activating fac 92.6 0.14 4.9E-06 38.9 4.5 37 139-175 6-42 (88)
2 2nxp_A Transcription initiatio 88.4 0.83 2.8E-05 38.3 6.1 68 198-265 33-100 (156)
3 1deq_A Fibrinogen (alpha chain 83.9 13 0.00045 35.4 12.2 26 176-201 176-201 (390)
4 2j49_A Transcription initiatio 83.1 0.72 2.4E-05 38.5 3.0 65 198-263 16-80 (148)
5 2j4b_A TAF5, transcription ini 83.1 1.7 5.9E-05 35.6 5.3 66 197-263 13-78 (138)
6 2xtc_A F-box-like/WD repeat-co 81.0 1.7 5.8E-05 33.1 4.1 33 142-174 4-36 (90)
7 2jo8_A Serine/threonine-protei 71.0 5.5 0.00019 27.0 4.0 34 44-77 3-37 (51)
8 2xz2_A CSTF-50, isoform B; RNA 57.4 18 0.0006 25.8 4.7 34 141-174 14-47 (66)
9 2lni_A Stress-induced-phosphop 56.1 54 0.0018 23.6 9.4 92 148-247 20-112 (133)
10 3q15_A PSP28, response regulat 55.4 43 0.0015 30.3 8.6 28 218-245 100-127 (378)
11 3u4t_A TPR repeat-containing p 54.8 50 0.0017 27.6 8.5 93 149-248 42-137 (272)
12 3swy_A Cyclic nucleotide-gated 52.3 47 0.0016 21.8 6.2 39 93-131 5-43 (46)
13 2kck_A TPR repeat; tetratricop 48.3 65 0.0022 22.2 8.4 94 149-248 11-106 (112)
14 3mkr_A Coatomer subunit epsilo 45.9 1.5E+02 0.0052 25.8 11.0 88 146-246 67-157 (291)
15 2d68_A FOP, FGFR1OP; alpha hel 45.3 41 0.0014 24.9 5.3 38 143-180 18-56 (82)
16 3gwk_C SAG1039, putative uncha 45.1 87 0.003 22.8 11.1 36 47-82 5-43 (98)
17 3swf_A CGMP-gated cation chann 45.0 54 0.0018 23.8 5.7 41 91-131 5-45 (74)
18 1xou_B Z5138 gene product; coi 42.3 96 0.0033 22.5 7.4 69 53-131 11-82 (95)
19 3rkv_A Putative peptidylprolyl 41.1 1.2E+02 0.0041 23.3 10.1 53 190-247 73-125 (162)
20 3twe_A Alpha4H; unknown functi 39.4 46 0.0016 18.7 3.6 21 90-110 5-25 (27)
21 1vyh_C Platelet-activating fac 38.1 6.7 0.00023 36.6 0.0 32 142-173 7-38 (410)
22 1t98_A KICB protein, chromosom 37.6 2.2E+02 0.0077 25.4 11.1 108 46-153 158-278 (287)
23 2dna_A Unnamed protein product 37.5 12 0.00043 26.7 1.3 25 184-208 34-60 (67)
24 1elr_A TPR2A-domain of HOP; HO 36.6 1.1E+02 0.0038 21.6 11.2 97 148-247 8-107 (131)
25 2xcb_A PCRH, regulatory protei 36.1 1.4E+02 0.0047 22.5 9.2 92 149-247 23-114 (142)
26 1a17_A Serine/threonine protei 34.4 1.4E+02 0.0049 22.2 9.5 92 148-245 51-143 (166)
27 3ro2_A PINS homolog, G-protein 34.3 2E+02 0.007 23.9 10.5 99 149-248 10-112 (338)
28 2vgx_A Chaperone SYCD; alterna 33.7 1.6E+02 0.0055 22.6 9.2 91 149-247 26-117 (148)
29 2ho1_A Type 4 fimbrial biogene 33.4 1.9E+02 0.0066 23.4 10.9 96 145-247 106-203 (252)
30 3lay_A Zinc resistance-associa 33.0 2.1E+02 0.0072 24.0 8.6 56 52-111 76-131 (175)
31 3ghg_A Fibrinogen alpha chain; 33.0 2.3E+02 0.0078 28.2 9.8 17 97-113 114-130 (562)
32 3uq3_A Heat shock protein STI1 32.1 2E+02 0.0068 23.1 10.4 98 146-247 7-107 (258)
33 1zl8_A LIN-7; heterodimer, alp 32.0 1.1E+02 0.0036 20.6 5.1 24 65-88 4-27 (53)
34 3ghg_A Fibrinogen alpha chain; 31.9 3.9E+02 0.013 26.5 12.7 28 171-198 168-195 (562)
35 4gcn_A Protein STI-1; structur 31.8 1.6E+02 0.0054 21.9 10.2 97 148-247 12-111 (127)
36 2y4t_A DNAJ homolog subfamily 30.9 2.9E+02 0.0099 24.7 10.3 97 148-246 215-322 (450)
37 4a1s_A PINS, partner of inscut 30.6 2.8E+02 0.0097 24.4 10.0 99 149-248 53-155 (411)
38 2knz_A Ubiquilin-4; cytoplasm, 30.4 20 0.00069 24.0 1.4 21 186-206 28-50 (53)
39 3sf4_A G-protein-signaling mod 30.3 2.7E+02 0.0094 24.2 10.7 100 148-248 13-116 (406)
40 2bwb_A Ubiquitin-like protein 29.4 21 0.00072 23.3 1.3 19 186-204 24-44 (46)
41 2dah_A Ubiquilin-3; UBA domain 29.4 23 0.00078 24.0 1.6 21 186-206 26-48 (54)
42 1wr1_B Ubiquitin-like protein 28.6 24 0.00082 24.3 1.6 21 186-206 34-56 (58)
43 3u3w_A Transcriptional activat 28.0 2.8E+02 0.0096 23.6 9.2 98 151-249 82-185 (293)
44 2vq2_A PILW, putative fimbrial 27.9 2.2E+02 0.0074 22.3 10.4 94 147-247 79-175 (225)
45 2xpi_A Anaphase-promoting comp 27.9 3.8E+02 0.013 25.1 11.1 22 148-169 411-432 (597)
46 3sz7_A HSC70 cochaperone (SGT) 27.4 2.1E+02 0.0071 21.9 10.7 94 146-247 13-107 (164)
47 3ulq_A Response regulator aspa 27.3 1.3E+02 0.0043 27.0 6.9 60 191-250 114-174 (383)
48 1wgn_A UBAP1, ubiquitin associ 27.1 60 0.0021 22.8 3.4 22 185-206 34-57 (63)
49 2jy5_A Ubiquilin-1; UBA, alter 27.0 23 0.00079 23.7 1.2 21 186-206 29-51 (52)
50 3ulq_A Response regulator aspa 26.4 3.4E+02 0.012 24.0 19.3 101 145-247 104-212 (383)
51 1whc_A RSGI RUH-027, UBA/UBX 3 26.3 61 0.0021 22.5 3.4 25 185-209 24-51 (64)
52 2de0_X Alpha-(1,6)-fucosyltran 25.9 4.6E+02 0.016 25.8 11.0 79 48-132 46-138 (526)
53 4i17_A Hypothetical protein; T 25.7 2.6E+02 0.0089 22.5 11.0 93 150-248 48-146 (228)
54 2dba_A Smooth muscle cell asso 25.6 1.9E+02 0.0066 20.9 10.5 95 146-247 30-127 (148)
55 3hym_B Cell division cycle pro 25.2 3E+02 0.01 23.0 11.9 96 149-247 164-264 (330)
56 3fse_A Two-domain protein cont 25.1 4.2E+02 0.014 24.7 10.6 41 92-132 226-268 (365)
57 4gkw_A Spindle assembly abnorm 25.0 2.7E+02 0.0093 22.4 7.4 66 46-111 63-130 (167)
58 4gco_A Protein STI-1; structur 24.7 2.2E+02 0.0074 21.2 9.4 92 148-247 17-109 (126)
59 1yke_B RNA polymerase II holoe 24.3 2.9E+02 0.01 22.5 10.3 75 58-132 54-131 (151)
60 3q49_B STIP1 homology and U bo 24.0 2.1E+02 0.007 20.7 9.4 93 147-247 12-105 (137)
61 1vej_A Riken cDNA 4931431F19; 24.0 30 0.001 25.1 1.4 22 185-206 45-68 (74)
62 3vtx_A MAMA; tetratricopeptide 23.8 2.5E+02 0.0085 21.6 10.5 95 146-247 75-169 (184)
63 2zqm_A Prefoldin beta subunit 23.8 1.6E+02 0.0056 22.2 5.9 41 41-81 57-97 (117)
64 2v5f_A Prolyl 4-hydroxylase su 23.5 2.1E+02 0.0072 20.6 7.1 57 190-246 15-73 (104)
65 3ieg_A DNAJ homolog subfamily 23.2 3.4E+02 0.012 22.9 10.2 57 146-205 156-213 (359)
66 2vyi_A SGTA protein; chaperone 22.9 2E+02 0.0067 20.0 10.7 95 145-247 13-108 (131)
67 1a17_A Serine/threonine protei 22.8 2.3E+02 0.008 20.9 10.8 96 144-247 13-109 (166)
68 2cos_A Serine/threonine protei 22.7 61 0.0021 22.0 2.7 21 186-206 25-48 (54)
69 2qx5_A Nucleoporin NIC96; mRNA 22.7 46 0.0016 34.1 3.0 25 147-171 155-179 (661)
70 1wyy_A E2 glycoprotein; membra 22.7 3.1E+02 0.011 22.3 10.3 88 48-153 9-100 (149)
71 4abn_A Tetratricopeptide repea 22.5 4.8E+02 0.016 24.4 11.5 94 145-247 103-207 (474)
72 2ekk_A UBA domain from E3 ubiq 22.3 80 0.0027 20.2 3.2 21 186-206 25-46 (47)
73 2cp9_A EF-TS, EF-TSMT, elongat 22.0 82 0.0028 22.1 3.4 22 186-207 26-49 (64)
74 2g3q_A Protein YBL047C; endocy 22.0 84 0.0029 19.6 3.2 21 186-206 20-42 (43)
75 1b33_N Phycobilisome 7.8 KD li 21.9 30 0.001 24.7 1.0 24 42-65 21-46 (67)
76 3zbh_A ESXA; unknown function, 21.8 2.2E+02 0.0076 20.2 9.8 36 47-82 6-44 (99)
77 2q7f_A YRRB protein; TPR, prot 21.2 3.1E+02 0.011 21.7 9.2 92 147-246 128-220 (243)
78 3uq3_A Heat shock protein STI1 21.1 3.2E+02 0.011 21.8 12.1 96 145-248 140-236 (258)
79 3mv2_B Coatomer subunit epsilo 21.0 1.6E+02 0.0056 26.9 6.2 90 146-245 73-162 (310)
80 2dak_A Ubiquitin carboxyl-term 20.8 85 0.0029 21.6 3.3 24 186-209 25-50 (63)
81 4ioe_A Secreted protein ESXB; 20.7 2.3E+02 0.0079 20.0 11.2 36 47-82 6-44 (93)
82 4f3v_A ESX-1 secretion system 20.6 4.6E+02 0.016 23.4 10.6 103 137-246 95-198 (282)
83 3upv_A Heat shock protein STI1 20.4 2.4E+02 0.0083 20.2 9.8 92 148-247 8-100 (126)
84 3as5_A MAMA; tetratricopeptide 20.3 2.7E+02 0.0093 20.7 12.0 17 230-246 121-137 (186)
85 1ykh_B RNA polymerase II holoe 20.2 3.3E+02 0.011 21.6 10.4 74 57-130 53-129 (132)
No 1
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=92.57 E-value=0.14 Score=38.94 Aligned_cols=37 Identities=14% Similarity=0.285 Sum_probs=32.4
Q ss_pred hhhcHHHHHHHHHHHHHHhChHHHHHHHHHHhCCCCc
Q 019785 139 AEWNNTRVKRILVDYMLRMSYYETAEKLAESSNIQDL 175 (336)
Q Consensus 139 ~~w~~~~l~rlI~dyLlR~G~~~tA~~L~~es~i~~~ 175 (336)
....++.|++.|++||..+||.+++.+|.++.+++..
T Consensus 6 t~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~ 42 (88)
T 1uuj_A 6 SQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMN 42 (88)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCC
Confidence 3455689999999999999999999999999988743
No 2
>2nxp_A Transcription initiation factor TFIID subunit 5; transcription factor, TAF5; 2.17A {Homo sapiens} SCOP: d.379.1.1
Probab=88.40 E-value=0.83 Score=38.29 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=54.1
Q ss_pred HHHHHHHhhchhhhhcCCchhHhhhHHHHHHHHhcCChHHHHHHHHHhccchhhhcHHHHHHHHHHhc
Q 019785 198 PALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLA 265 (336)
Q Consensus 198 ~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~eiq~~m~lLa 265 (336)
.-..|+..+-..-+..-+.+-|=+.+.=|++||..|...+|-.|.+++-+-+...|.++|+++.++.-
T Consensus 33 ~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~~~~~i~~L~~i~~ 100 (156)
T 2nxp_A 33 GLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTK 100 (156)
T ss_dssp HHHHHHHTSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGSCGGGHHHHHHHHTCCS
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhHHhHHHHHHHHHHHhcCCC
Confidence 34567777643333333678999999999999999999999999999888888788899999887543
No 3
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=83.86 E-value=13 Score=35.36 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=14.9
Q ss_pred ccHHHHHHHHHHHHHHHcCChHHHHH
Q 019785 176 VDIEVFQEAKKVIDALQNKEVAPALA 201 (336)
Q Consensus 176 ~d~e~f~~~~~I~~~L~~gdi~~AL~ 201 (336)
+|++.|...++=...+..-|+-+.++
T Consensus 176 vD~e~ye~qqKQL~qv~a~~llP~~~ 201 (390)
T 1deq_A 176 VDLEDYKNQQKQLEQVIAINLLPSRD 201 (390)
T ss_pred ccHHHHHHHHHHHHhhhhhccccccc
Confidence 56666666655555555555555544
No 4
>2j49_A Transcription initiation factor TFIID subunit 5; nuclear protein, transcription regulation, TA TFIID, WD repeat; 2.3A {Saccharomyces cerevisiae} SCOP: d.379.1.1
Probab=83.14 E-value=0.72 Score=38.46 Aligned_cols=65 Identities=15% Similarity=0.265 Sum_probs=49.0
Q ss_pred HHHHHHHhhchhhhhcCCchhHhhhHHHHHHHHhcCChHHHHHHHHHhccchhhhcHHHHHHHHHH
Q 019785 198 PALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMAT 263 (336)
Q Consensus 198 ~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~eiq~~m~l 263 (336)
.-..|++.+-..-+..=+.|-|=+.+.=|++||..| ..+|-.|..++-+-+...|.++|+++.++
T Consensus 16 ~Lr~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g-~~~A~~F~~~f~~~~~~~~~~~i~~L~~i 80 (148)
T 2j49_A 16 MLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKN-PVYARRFFDRFSPDFKDFHGSEINRLFSV 80 (148)
T ss_dssp HHHHHHHTSCTTTHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHGGGGHHHHHHHHHTTTTC
T ss_pred HHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHhHHhHHHHHHHHHHHhcC
Confidence 345687776322222225688999999999999999 99999999988888877777888877663
No 5
>2j4b_A TAF5, transcription initiation factor TFIID subunit 72/ kDa; WD repeat; 2.5A {Encephalitozoon cuniculi} SCOP: d.379.1.1
Probab=83.07 E-value=1.7 Score=35.60 Aligned_cols=66 Identities=14% Similarity=0.257 Sum_probs=48.6
Q ss_pred HHHHHHHHhhchhhhhcCCchhHhhhHHHHHHHHhcCChHHHHHHHHHhccchhhhcHHHHHHHHHH
Q 019785 197 APALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMAT 263 (336)
Q Consensus 197 ~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~~~~~~eiq~~m~l 263 (336)
..-..|++.+-..-+..=+.+-|=+.+.=|++||..|...+|-.|..++-+-+... .++|+++.++
T Consensus 13 ~~L~~wv~~sld~yk~EL~~lLyPlFvh~yL~Lv~~g~~~~A~~F~~~f~~~~~~~-~~~i~~L~~i 78 (138)
T 2j4b_A 13 VSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDHYNK-SEEIKQFESI 78 (138)
T ss_dssp HHHHHHHHHSCHHHHHHHGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC--C-HHHHHHHTTC
T ss_pred HHHHHHHHhCcHhhHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHhHHHhhH-HHHHHHHhcC
Confidence 34456887763333333367899999999999999999999999999887777665 6777777654
No 6
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=80.97 E-value=1.7 Score=33.10 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHHHHHhChHHHHHHHHHHhCCCC
Q 019785 142 NNTRVKRILVDYMLRMSYYETAEKLAESSNIQD 174 (336)
Q Consensus 142 ~~~~l~rlI~dyLlR~G~~~tA~~L~~es~i~~ 174 (336)
...++|.+|--||...||..+|-.|.+|++|..
T Consensus 4 tsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~ 36 (90)
T 2xtc_A 4 TSDEVNFLVYRYLQESGFSHSAFTFGIESHISQ 36 (90)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGG
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCc
Confidence 467899999999999999999999999998863
No 7
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=70.99 E-value=5.5 Score=26.96 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=28.4
Q ss_pred cccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019785 44 EHQFLR-VPFEHYKKTIRTNHRAVEKEITSVISNV 77 (336)
Q Consensus 44 e~~~~~-vP~E~l~k~fr~~qk~ieke~~~v~~~~ 77 (336)
|..|++ .+||.|.++....+..+|+|+..+-..-
T Consensus 3 df~fLk~ls~eEL~~rl~~Ld~~Me~Ei~elr~RY 37 (51)
T 2jo8_A 3 DYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKY 37 (51)
T ss_dssp CCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHhCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 455666 8999999999999999999998876543
No 8
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=57.36 E-value=18 Score=25.78 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=30.7
Q ss_pred hcHHHHHHHHHHHHHHhChHHHHHHHHHHhCCCC
Q 019785 141 WNNTRVKRILVDYMLRMSYYETAEKLAESSNIQD 174 (336)
Q Consensus 141 w~~~~l~rlI~dyLlR~G~~~tA~~L~~es~i~~ 174 (336)
-.|+.|-|+|+.-|.-.||...|..|...-+.+.
T Consensus 14 K~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~~ 47 (66)
T 2xz2_A 14 KNREILYRLMISQLMYDGLEKFAMELSMLVKADQ 47 (66)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCCC
Confidence 3578999999999999999999999999988764
No 9
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=56.15 E-value=54 Score=23.63 Aligned_cols=92 Identities=13% Similarity=0.052 Sum_probs=55.5
Q ss_pred HHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHH
Q 019785 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~f 226 (336)
..++..+.+.|.++.|..+.++. .+. ..+.+.+..+..+ ....|+.+.|+.++.+--.. . ... ...+...-
T Consensus 20 ~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~--~~~~~~~~~A~~~~~~a~~~-~--~~~--~~~~~~la 91 (133)
T 2lni_A 20 KNKGNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNRAAC--YTKLLEFQLALKDCEECIQL-E--PTF--IKGYTRKA 91 (133)
T ss_dssp HHHHHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHHHHH--HTTTTCHHHHHHHHHHHHHH-C--TTC--HHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHH--HHHhccHHHHHHHHHHHHHh-C--CCc--hHHHHHHH
Confidence 44677778888888876655543 443 2234444433333 35689999999998765321 1 111 22233333
Q ss_pred HHHHhcCChHHHHHHHHHhcc
Q 019785 227 IELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 227 IELir~~~~~eAi~yar~~l~ 247 (336)
.-+.+.|+..+|+.+.++-+.
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHH
Confidence 445677899999999886554
No 10
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=55.45 E-value=43 Score=30.29 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=12.4
Q ss_pred hHhhhHHHHHHHHhcCChHHHHHHHHHh
Q 019785 218 EFQLRLQEFIELVRGENNLRAITYARKY 245 (336)
Q Consensus 218 eF~Lr~q~fIELir~~~~~eAi~yar~~ 245 (336)
.+..+...-+-....|+..+|+.+.++-
T Consensus 100 ~~~~~~~~g~~~~~~g~~~~A~~~~~~a 127 (378)
T 3q15_A 100 KYYSLFFRGMYEFDQKEYVEAIGYYREA 127 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 3333333334444445555555554443
No 11
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=54.80 E-value=50 Score=27.55 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=45.6
Q ss_pred HHHHHHHHhChHHHHHHHHHHh-CCCCccc--HHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHH
Q 019785 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVD--IEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es-~i~~~~d--~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~ 225 (336)
.++..+.+.|.++.|....+.. ......+ ...+..+..+ ....|+.+.|+.++..--.. ...+ ...+..-
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~--~~~~~~~~~A~~~~~~a~~~-~~~~----~~~~~~l 114 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKI--LMKKGQDSLAIQQYQAAVDR-DTTR----LDMYGQI 114 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH-STTC----THHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHH--HHHcccHHHHHHHHHHHHhc-Cccc----HHHHHHH
Confidence 3455666677666665444432 2211111 1222222222 23567777777777655321 1111 1233333
Q ss_pred HHHHHhcCChHHHHHHHHHhccc
Q 019785 226 FIELVRGENNLRAITYARKYLAP 248 (336)
Q Consensus 226 fIELir~~~~~eAi~yar~~l~~ 248 (336)
-.-+...|+..+|+.+.++-+.-
T Consensus 115 ~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 115 GSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHccCHHHHHHHHHHHhhc
Confidence 44445567777777777766543
No 12
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=52.35 E-value=47 Score=21.84 Aligned_cols=39 Identities=23% Similarity=0.278 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHhhh
Q 019785 93 NHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLE 131 (336)
Q Consensus 93 ~~ld~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~ 131 (336)
.+++.|-..|+.++-|+.....+-.....+++.||..|.
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555666666666666666677788888888764
No 13
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=48.29 E-value=65 Score=22.23 Aligned_cols=94 Identities=7% Similarity=-0.037 Sum_probs=55.0
Q ss_pred HHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHHH
Q 019785 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFI 227 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fI 227 (336)
.++..+.+.|.++.|....+.. .+. ..+.+.+..+..+ ....|+.+.|+.++.+--.. .........+...-.
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~a~~~---~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKA--LYNLERYEEAVDCYNYVINV---IEDEYNKDVWAAKAD 84 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHT---SCCTTCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHH--HHHccCHHHHHHHHHHHHHh---CcccchHHHHHHHHH
Confidence 4566677888887776554432 222 1233443333332 34679999999998765321 112112334444445
Q ss_pred HHHhc-CChHHHHHHHHHhccc
Q 019785 228 ELVRG-ENNLRAITYARKYLAP 248 (336)
Q Consensus 228 ELir~-~~~~eAi~yar~~l~~ 248 (336)
-+.+. |+..+|+.+.++-+..
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHhCCHHHHHHHHHHHhhc
Confidence 56678 9999999999876543
No 14
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=45.91 E-value=1.5e+02 Score=25.85 Aligned_cols=88 Identities=11% Similarity=0.065 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHh---CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhh
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESS---NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es---~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr 222 (336)
.-+.+++++.+.|-.+.|....++. ++. +-+.+....+.. -....|+.+.|++++.. ....+ .+
T Consensus 67 a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~-P~~~~~~~~la~--~~~~~g~~~~Al~~l~~--------~~~~~--~~ 133 (291)
T 3mkr_A 67 AVRMFAEYLASHSRRDAIVAELDREMSRSVD-VTNTTFLLMAAS--IYFYDQNPDAALRTLHQ--------GDSLE--CM 133 (291)
T ss_dssp HHHHHHHHHHCSTTHHHHHHHHHHHHHSCCC-CSCHHHHHHHHH--HHHHTTCHHHHHHHHTT--------CCSHH--HH
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHhcccC-CCCHHHHHHHHH--HHHHCCCHHHHHHHHhC--------CCCHH--HH
Confidence 3455677777777666665444331 211 112222222211 22356777777777766 12222 22
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhc
Q 019785 223 LQEFIELVRGENNLRAITYARKYL 246 (336)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l 246 (336)
.....-+++.|+..+|+.+.++-+
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~ 157 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQ 157 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHH
Confidence 222333555677777777666543
No 15
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=45.33 E-value=41 Score=24.93 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHhCCCC-cccHHH
Q 019785 143 NTRVKRILVDYMLRMSYYETAEKLAESSNIQD-LVDIEV 180 (336)
Q Consensus 143 ~~~l~rlI~dyLlR~G~~~tA~~L~~es~i~~-~~d~e~ 180 (336)
...++.+|.|||--.||.=|...|..|+|+.. ..|.+.
T Consensus 18 GrLi~~LVrEyLef~~l~~TlsVf~pEs~l~~~~~~R~~ 56 (82)
T 2d68_A 18 GRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGREN 56 (82)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC---CCHHH
T ss_pred cHHHHHHHHHHHHHcCCcchHHhhhhccCCCCCCCCHHH
Confidence 36789999999999999999999999999963 445553
No 16
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=45.11 E-value=87 Score=22.79 Aligned_cols=36 Identities=8% Similarity=0.195 Sum_probs=30.0
Q ss_pred cccccHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhh
Q 019785 47 FLRVPFEHYKKT---IRTNHRAVEKEITSVISNVADVSD 82 (336)
Q Consensus 47 ~~~vP~E~l~k~---fr~~qk~ieke~~~v~~~~~~l~~ 82 (336)
.++|.||.|+.. |+.....|+..+..+...+..+..
T Consensus 5 ~i~V~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~ 43 (98)
T 3gwk_C 5 QIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDE 43 (98)
T ss_dssp HBCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 478999998864 788888889999999998888865
No 17
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=44.96 E-value=54 Score=23.80 Aligned_cols=41 Identities=20% Similarity=0.191 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHhhh
Q 019785 91 AVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLE 131 (336)
Q Consensus 91 ~~~~ld~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~ 131 (336)
...+++.|-..|+.|+-|+.....+-.....+++.||..|.
T Consensus 5 lEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE 45 (74)
T 3swf_A 5 LEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVE 45 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555555666666776666666677778888888776
No 18
>1xou_B Z5138 gene product; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.2
Probab=42.33 E-value=96 Score=22.53 Aligned_cols=69 Identities=20% Similarity=0.282 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHh
Q 019785 53 EHYKKTIRTNHRAVE---KEITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNH 129 (336)
Q Consensus 53 E~l~k~fr~~qk~ie---ke~~~v~~~~~~l~~~~~~~~~~~~~~ld~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~ 129 (336)
|+|-|..|+--..|. -|++-|...++.++.....++ ++.+.|+.+|+--. ..+|.++++..-++|+.
T Consensus 11 elldkkirseie~ikkiiaefdvvke~v~~l~ekakt~p-qaae~ln~liegyt---------~geerklydsalskiek 80 (95)
T 1xou_B 11 ELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEKAKTDP-QAAEKLNKLIEGYT---------YGEERKLYDSALSKIEK 80 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH---------HSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHhhc---------chhHHHHHHHHHHHHHH
Confidence 456666665443333 366666666665543211222 35566666665422 23455556665555555
Q ss_pred hh
Q 019785 130 LE 131 (336)
Q Consensus 130 L~ 131 (336)
|-
T Consensus 81 li 82 (95)
T 1xou_B 81 LI 82 (95)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 19
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=41.11 E-value=1.2e+02 Score=23.28 Aligned_cols=53 Identities=9% Similarity=-0.090 Sum_probs=35.5
Q ss_pred HHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHHHHHHhcCChHHHHHHHHHhcc
Q 019785 190 ALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 190 ~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (336)
.+..|+.+.|+.+|..--. +.. . ....+...-.-+...|+..+|+.+.++-+.
T Consensus 73 ~~~~~~~~~A~~~~~~al~-~~p--~--~~~a~~~~g~~~~~~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 73 YLNIGDLHEAEETSSEVLK-REE--T--NEKALFRRAKARIAAWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHTCHHHHHHHHHHHHH-HST--T--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHh-cCC--c--chHHHHHHHHHHHHHhcHHHHHHHHHHHHh
Confidence 4567999999999976521 111 1 223444445556678999999999987654
No 20
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=39.44 E-value=46 Score=18.73 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 019785 90 DAVNHLTSLVSRLQGLKRKLE 110 (336)
Q Consensus 90 ~~~~~ld~li~kl~~lkrkl~ 110 (336)
+.-+.|+.+.++++.+++|+.
T Consensus 5 elykeledlqerlrklrkklr 25 (27)
T 3twe_A 5 ELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 345667888889998888874
No 21
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=38.07 E-value=6.7 Score=36.59 Aligned_cols=32 Identities=16% Similarity=0.378 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHHHhChHHHHHHHHHHhCCC
Q 019785 142 NNTRVKRILVDYMLRMSYYETAEKLAESSNIQ 173 (336)
Q Consensus 142 ~~~~l~rlI~dyLlR~G~~~tA~~L~~es~i~ 173 (336)
.++.++|+|++||..+||.+++..|.+|.+++
T Consensus 7 q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~ 38 (410)
T 1vyh_C 7 QRDELNRAIADYLRSNGYEEAYSVFKKEAELD 38 (410)
T ss_dssp --------------------------------
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHhCCC
Confidence 46789999999999999999999999998875
No 22
>1t98_A KICB protein, chromosome partition protein MUKF; winged helix, helix-turn helix, domain swapped, condensin; 2.90A {Escherichia coli} SCOP: a.4.5.65 a.47.6.1
Probab=37.57 E-value=2.2e+02 Score=25.39 Aligned_cols=108 Identities=10% Similarity=0.170 Sum_probs=63.3
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCChHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 019785 46 QFLRVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSE-NFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCR 124 (336)
Q Consensus 46 ~~~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~-~~~~~~~~~~ld~li~kl~~lkrkl~~~~~~e~~~~~~~~ 124 (336)
+-+|.....+--..--.|+.++-.-..|...|+++-... ...-......|++.-..|+.|+..++..-.+-...+.+++
T Consensus 158 apLkySVaeifd~IDl~QR~mDeQQ~~Vk~~IA~LL~qDW~~AI~~CE~LL~eTs~tLRELqDtL~aagd~lqa~Ll~IQ 237 (287)
T 1t98_A 158 APLKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQ 237 (287)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeeHHHHHhhhhHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHhHHHHHHHHHHHH
Confidence 446777788888888999999999999999999885420 0111234456666666677776666544332222222221
Q ss_pred HHH------Hhhhc--c----CcchhhhhcHHHHHHHHHHH
Q 019785 125 ARL------NHLES--A----DAENLAEWNNTRVKRILVDY 153 (336)
Q Consensus 125 ~Rl------~~L~~--~----~~~~~~~w~~~~l~rlI~dy 153 (336)
.-. ++... + ..+....|-+..++-+|+.+
T Consensus 238 ~~~~~~~~l~~vd~l~~~Lq~klDRI~sWGqq~idlWigYd 278 (287)
T 1t98_A 238 DATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYD 278 (287)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00000 0 02334678888888888654
No 23
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=37.47 E-value=12 Score=26.68 Aligned_cols=25 Identities=12% Similarity=0.128 Sum_probs=19.5
Q ss_pred HHHHHHHHH--cCChHHHHHHHHhhch
Q 019785 184 AKKVIDALQ--NKEVAPALAWCSDNKS 208 (336)
Q Consensus 184 ~~~I~~~L~--~gdi~~AL~W~~~n~~ 208 (336)
....+++|+ .||++.|++|+-.+.+
T Consensus 34 ~~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 34 YNANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 335677775 7999999999988754
No 24
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=36.59 E-value=1.1e+02 Score=21.57 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=57.5
Q ss_pred HHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCc--hhHhhhHH
Q 019785 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSK--FEFQLRLQ 224 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~--LeF~Lr~q 224 (336)
..++..+...|.++.|..+.+.. .+. ..+...+..+..+ ....|+.+.|+.++.+--..-...... ....++..
T Consensus 8 ~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~--~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (131)
T 1elr_A 8 KELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAV--YFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYAR 84 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHH--HHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 45677778888888887655443 222 2233433333332 346799999999988764332221111 11334444
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 019785 225 EFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (336)
.-.-+.+.|+..+|+.+.++-+.
T Consensus 85 la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 85 IGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHH
Confidence 44456678999999999887654
No 25
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=36.13 E-value=1.4e+02 Score=22.49 Aligned_cols=92 Identities=13% Similarity=-0.026 Sum_probs=55.4
Q ss_pred HHHHHHHHhChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHHHH
Q 019785 149 ILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIE 228 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fIE 228 (336)
.++..+++.|.++.|..+.+..--.++.+.+.+..+..+ ....|+.+.|+.++..--. +...+... +...-.-
T Consensus 23 ~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al~-~~p~~~~~----~~~lg~~ 95 (142)
T 2xcb_A 23 ALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGAC--RQSLGLYEQALQSYSYGAL-MDINEPRF----PFHAAEC 95 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCTTCTHH----HHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHH--HHHHhhHHHHHHHHHHHHh-cCCCCcHH----HHHHHHH
Confidence 356778888988888766554311123344544444443 2468999999999876522 22222222 2233344
Q ss_pred HHhcCChHHHHHHHHHhcc
Q 019785 229 LVRGENNLRAITYARKYLA 247 (336)
Q Consensus 229 Lir~~~~~eAi~yar~~l~ 247 (336)
+...|+..+|+.+.++-+.
T Consensus 96 ~~~~g~~~~A~~~~~~al~ 114 (142)
T 2xcb_A 96 HLQLGDLDGAESGFYSARA 114 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 5677999999999886543
No 26
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=34.39 E-value=1.4e+02 Score=22.22 Aligned_cols=92 Identities=15% Similarity=0.036 Sum_probs=50.1
Q ss_pred HHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHH
Q 019785 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~f 226 (336)
..++..+.+.|.++.|....+.. .+. ..+...+..+..+ ....|+.+.|+.++.+--.. ....-.........
T Consensus 51 ~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~a~~~---~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 51 GNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAAS--NMALGKFRAALRDYETVVKV---KPHDKDAKMKYQEC 124 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH---STTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHH--HHHhccHHHHHHHHHHHHHh---CCCCHHHHHHHHHH
Confidence 45566677778777776544432 222 2233433333332 34578999999888765321 11222333333344
Q ss_pred HHHHhcCChHHHHHHHHHh
Q 019785 227 IELVRGENNLRAITYARKY 245 (336)
Q Consensus 227 IELir~~~~~eAi~yar~~ 245 (336)
..+++.|+..+|+.+..+.
T Consensus 125 ~~~~~~~~~~~A~~~~~~~ 143 (166)
T 1a17_A 125 NKIVKQKAFERAIAGDEHK 143 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccch
Confidence 4455667788888777643
No 27
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=34.29 E-value=2e+02 Score=23.95 Aligned_cols=99 Identities=11% Similarity=-0.022 Sum_probs=58.4
Q ss_pred HHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHH--HHHHHHHHHHcCChHHHHHHHHhhchhhhhcCC-chhHhhhHH
Q 019785 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQ--EAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS-KFEFQLRLQ 224 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~--~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s-~LeF~Lr~q 224 (336)
+.+..+++.|.++.|..+.++. .+. ..+..... -.....-....|+.+.|++++.+--....+.+. .....++..
T Consensus 10 ~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 88 (338)
T 3ro2_A 10 LEGERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGN 88 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 4577888899888887655543 222 22322111 111222334689999999998876544333322 233444444
Q ss_pred HHHHHHhcCChHHHHHHHHHhccc
Q 019785 225 EFIELVRGENNLRAITYARKYLAP 248 (336)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~~ 248 (336)
--.-+...|+..+|+.+.++-+.-
T Consensus 89 l~~~~~~~g~~~~A~~~~~~al~~ 112 (338)
T 3ro2_A 89 LGNTLKVLGNFDEAIVCCQRHLDI 112 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHH
Confidence 445566778999999988875543
No 28
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=33.74 E-value=1.6e+02 Score=22.61 Aligned_cols=91 Identities=12% Similarity=0.007 Sum_probs=56.3
Q ss_pred HHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHHH
Q 019785 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFI 227 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~fI 227 (336)
.++..+++.|.++.|....+.. .+. +.+.+.+..+..+ ....|+.+.|++++..-- .+...+.... ...-.
T Consensus 26 ~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al-~l~p~~~~~~----~~lg~ 97 (148)
T 2vgx_A 26 SLAFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGLGAC--RQAMGQYDLAIHSYSYGA-VMDIXEPRFP----FHAAE 97 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHH-HHSTTCTHHH----HHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHHHHH--HHHHhhHHHHHHHHHHHH-hcCCCCchHH----HHHHH
Confidence 3577788899888886555543 222 3344544444333 246799999999987652 2222222222 23344
Q ss_pred HHHhcCChHHHHHHHHHhcc
Q 019785 228 ELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 228 ELir~~~~~eAi~yar~~l~ 247 (336)
-+...|+..+|+.+.++-+.
T Consensus 98 ~~~~~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 98 CLLQXGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 46678999999999987654
No 29
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=33.39 E-value=1.9e+02 Score=23.43 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHhCC--CCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhh
Q 019785 145 RVKRILVDYMLRMSYYETAEKLAESSNI--QDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (336)
Q Consensus 145 ~l~rlI~dyLlR~G~~~tA~~L~~es~i--~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr 222 (336)
.+-..++..+.+.|.++.|..+.++.-- ....+...+..+. .-.+..|+.+.|++++.+--.. ...... .+
T Consensus 106 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la--~~~~~~g~~~~A~~~~~~~~~~---~~~~~~--~~ 178 (252)
T 2ho1_A 106 RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLG--LVSLQMKKPAQAKEYFEKSLRL---NRNQPS--VA 178 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHH---CSCCHH--HH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHH--HHHHHcCCHHHHHHHHHHHHhc---CcccHH--HH
Confidence 3445567777888888888766655422 1222233333332 2335678999999888765321 111222 22
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhcc
Q 019785 223 LQEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l~ 247 (336)
..--.-+.+.|+..+|+.+.++-+.
T Consensus 179 ~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 179 LEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 2222234567888888888887554
No 30
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=33.04 E-value=2.1e+02 Score=24.01 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHhh
Q 019785 52 FEHYKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEE 111 (336)
Q Consensus 52 ~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~ld~li~kl~~lkrkl~~ 111 (336)
+..|++.||...+.+-.++...-..+.++-...+++. ++++.+++.+..++.++..
T Consensus 76 l~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~De----akI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 76 AQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDT----AKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH----HHHHHHHHHHHHHHHHHHH
Confidence 4456667777666666666666666665544333443 3456666777777777654
No 31
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=32.97 E-value=2.3e+02 Score=28.16 Aligned_cols=17 Identities=47% Similarity=0.517 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHhhhc
Q 019785 97 SLVSRLQGLKRKLEEGS 113 (336)
Q Consensus 97 ~li~kl~~lkrkl~~~~ 113 (336)
.|=.+++.||++++..+
T Consensus 114 ELRRrIqyLKekVdnQl 130 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKV 130 (562)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44455666666665544
No 32
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=32.07 E-value=2e+02 Score=23.15 Aligned_cols=98 Identities=10% Similarity=0.077 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCc--hhHhhh
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSK--FEFQLR 222 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~--LeF~Lr 222 (336)
.-..++..+++.|.++.|..+.++. .+. .+.+.+..+. .-....|+.+.|+.++..--..-.+.... .....+
T Consensus 7 ~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 82 (258)
T 3uq3_A 7 KEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRA--AAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSF 82 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHH--HHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHH--HHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHH
Confidence 3355778888888888886555432 222 2233333333 23456799999999987754333222111 113444
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhcc
Q 019785 223 LQEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l~ 247 (336)
...-.-+.+.|+..+|+.+.++-+.
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHh
Confidence 4444555677899999998887665
No 33
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=32.02 E-value=1.1e+02 Score=20.61 Aligned_cols=24 Identities=8% Similarity=0.362 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCh
Q 019785 65 AVEKEITSVISNVADVSDSENFSK 88 (336)
Q Consensus 65 ~ieke~~~v~~~~~~l~~~~~~~~ 88 (336)
.++|++..++.-+..+.+++++..
T Consensus 4 ~L~RDv~RaiELle~lq~sgevp~ 27 (53)
T 1zl8_A 4 NLERDVQRILELMEHVQKTGEVNN 27 (53)
T ss_dssp HHHHHHHHHHHHHHHHGGGSSSTH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCc
Confidence 478899999999999988776554
No 34
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=31.88 E-value=3.9e+02 Score=26.49 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=20.0
Q ss_pred CCCCcccHHHHHHHHHHHHHHHcCChHH
Q 019785 171 NIQDLVDIEVFQEAKKVIDALQNKEVAP 198 (336)
Q Consensus 171 ~i~~~~d~e~f~~~~~I~~~L~~gdi~~ 198 (336)
.++..+|++.|...++-.+.+..-|+.+
T Consensus 168 ~~~~~vd~~sY~~~QKQLeQv~a~dL~p 195 (562)
T 3ghg_A 168 ALAREVDLKDYEDQQKQLEQVIAKDLLP 195 (562)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred hheeecchHHHHHHHHHHHHHhhcccCC
Confidence 4456688888888887777776666644
No 35
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=31.80 E-value=1.6e+02 Score=21.92 Aligned_cols=97 Identities=10% Similarity=0.191 Sum_probs=56.5
Q ss_pred HHHHHHHHHhChHHHHHHHHHH-hCCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchh--HhhhHH
Q 019785 148 RILVDYMLRMSYYETAEKLAES-SNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFE--FQLRLQ 224 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~e-s~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~Le--F~Lr~q 224 (336)
+-++.-+++.|.++.|...-++ ..+. +.+...+..+..+ -+..|+.+.|++++..--..-.+...... -..+..
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~--~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~ 88 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIELD-PSNITFYNNKAAV--YFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSR 88 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHH--HHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHH
Confidence 4578888999988888644433 3333 2345555554443 34679999999998765221111111111 112222
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 019785 225 EFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (336)
.-.-+...|+..+|+.+.++-+.
T Consensus 89 lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 89 AGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh
Confidence 22234567899999999988765
No 36
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=30.91 E-value=2.9e+02 Score=24.69 Aligned_cols=97 Identities=8% Similarity=0.072 Sum_probs=51.7
Q ss_pred HHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHH----------HHHHHHHHcCChHHHHHHHHhhchhhhhcCCc
Q 019785 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEA----------KKVIDALQNKEVAPALAWCSDNKSRLKKSKSK 216 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~----------~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~ 216 (336)
..++..+.+.|.++.|..+.++. .+.+ .+...+..+ ....-....|+++.|+.++.+--. +...+..
T Consensus 215 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~-~~p~~~~ 292 (450)
T 2y4t_A 215 YKISTLYYQLGDHELSLSEVRECLKLDQ-DHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMK-TEPSIAE 292 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HCCSSHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-cCCcchH
Confidence 44566677778777776554433 2221 112222111 112333467888888888876532 1111222
Q ss_pred hhHhhhHHHHHHHHhcCChHHHHHHHHHhc
Q 019785 217 FEFQLRLQEFIELVRGENNLRAITYARKYL 246 (336)
Q Consensus 217 LeF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (336)
....++...-.-+.+.|+..+|+.+.++-+
T Consensus 293 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 322 (450)
T 2y4t_A 293 YTVRSKERICHCFSKDEKPVEAIRVCSEVL 322 (450)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 223344444445666788888888887654
No 37
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=30.57 E-value=2.8e+02 Score=24.45 Aligned_cols=99 Identities=7% Similarity=-0.092 Sum_probs=55.9
Q ss_pred HHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHH-H-HHHHHHHHcCChHHHHHHHHhhchhhhhcCC-chhHhhhHH
Q 019785 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQE-A-KKVIDALQNKEVAPALAWCSDNKSRLKKSKS-KFEFQLRLQ 224 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~-~-~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s-~LeF~Lr~q 224 (336)
.++..+++.|.++.|..+.++. .+. ..+.+.... . ..-.-....|+.+.|++++.+--....+.+. ......+..
T Consensus 53 ~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 131 (411)
T 4a1s_A 53 LEGERLCNAGDCRAGVAFFQAAIQAG-TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGN 131 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHhc-ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 4677788888888776555442 222 122222111 1 1112223579999999998776544433322 233344444
Q ss_pred HHHHHHhcCChHHHHHHHHHhccc
Q 019785 225 EFIELVRGENNLRAITYARKYLAP 248 (336)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~~ 248 (336)
--.-+...|+..+|+.+.++-+.-
T Consensus 132 l~~~~~~~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH
Confidence 444556678888888888765543
No 38
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=30.41 E-value=20 Score=24.02 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=16.5
Q ss_pred HHHHHHH--cCChHHHHHHHHhh
Q 019785 186 KVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n 206 (336)
+++.+|+ +||++.|++|+-.+
T Consensus 28 ~~~~AL~~t~gnve~Ave~L~~~ 50 (53)
T 2knz_A 28 ANLQALIATGGDINAAIERLLGS 50 (53)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHc
Confidence 4666664 68999999999765
No 39
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=30.31 E-value=2.7e+02 Score=24.20 Aligned_cols=100 Identities=11% Similarity=-0.021 Sum_probs=60.0
Q ss_pred HHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHH--HHHHHHHHcCChHHHHHHHHhhchhhhhcCC-chhHhhhH
Q 019785 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEA--KKVIDALQNKEVAPALAWCSDNKSRLKKSKS-KFEFQLRL 223 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~--~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s-~LeF~Lr~ 223 (336)
...++.+++.|.++.|..+.++. .+. ..+.+..... ..-.-....|+.+.|+.++.+--....+.+. ......+.
T Consensus 13 ~~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 91 (406)
T 3sf4_A 13 ALEGERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASG 91 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 45788889999998887665543 222 2233222111 1122334689999999998876444333322 23344444
Q ss_pred HHHHHHHhcCChHHHHHHHHHhccc
Q 019785 224 QEFIELVRGENNLRAITYARKYLAP 248 (336)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~~ 248 (336)
..-.-+...|+..+|+.+.++-+.-
T Consensus 92 ~la~~~~~~g~~~~A~~~~~~al~~ 116 (406)
T 3sf4_A 92 NLGNTLKVLGNFDEAIVCCQRHLDI 116 (406)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4445566779999999988865543
No 40
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=29.43 E-value=21 Score=23.29 Aligned_cols=19 Identities=26% Similarity=0.204 Sum_probs=15.0
Q ss_pred HHHHHHH--cCChHHHHHHHH
Q 019785 186 KVIDALQ--NKEVAPALAWCS 204 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~ 204 (336)
.++.+|+ +||++.|++|+-
T Consensus 24 ~~~~AL~~~~gnv~~Ave~L~ 44 (46)
T 2bwb_A 24 RNVAALRRSGGSVQGALDSLL 44 (46)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHH
Confidence 4666764 799999999974
No 41
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=29.40 E-value=23 Score=23.98 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=16.8
Q ss_pred HHHHHHH--cCChHHHHHHHHhh
Q 019785 186 KVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n 206 (336)
..+.+|+ +||++.|++|+-.+
T Consensus 26 ~n~~AL~~~~Gdv~~Ave~L~~~ 48 (54)
T 2dah_A 26 ANLQALIATGGDVDAAVEKLRQS 48 (54)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHhC
Confidence 4566664 79999999999776
No 42
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=28.60 E-value=24 Score=24.32 Aligned_cols=21 Identities=24% Similarity=0.226 Sum_probs=16.4
Q ss_pred HHHHHHH--cCChHHHHHHHHhh
Q 019785 186 KVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n 206 (336)
.++.+|+ +||++.|++|+-.+
T Consensus 34 ~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 34 RNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCHHHHHHHHHhC
Confidence 5667774 79999999998654
No 43
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=28.03 E-value=2.8e+02 Score=23.63 Aligned_cols=98 Identities=8% Similarity=0.028 Sum_probs=50.8
Q ss_pred HHHHHHhChHHHHHHHHHHh-CCCCc-ccHHHHHHHHH-HHHHH-HcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHH
Q 019785 151 VDYMLRMSYYETAEKLAESS-NIQDL-VDIEVFQEAKK-VIDAL-QNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (336)
Q Consensus 151 ~dyLlR~G~~~tA~~L~~es-~i~~~-~d~e~f~~~~~-I~~~L-~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~f 226 (336)
++.+++.|.++.|..+.++. ..... .+...+..... +-... ..|+.+.|+....+--.... ...+....+.....
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~-~~~~~~~~~~~~~~ 160 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL-TGIDVYQNLYIENA 160 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCC-CCSCTTHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhc-ccccHHHHHHHHHH
Confidence 56677777777776665553 22211 12222222222 22222 34678888887766543222 22333333443444
Q ss_pred HH--HHhcCChHHHHHHHHHhccch
Q 019785 227 IE--LVRGENNLRAITYARKYLAPW 249 (336)
Q Consensus 227 IE--Lir~~~~~eAi~yar~~l~~~ 249 (336)
+= ....|+..+|+.|.++-+.-+
T Consensus 161 lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 161 IANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 43 234678888888888777644
No 44
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=27.89 E-value=2.2e+02 Score=22.28 Aligned_cols=94 Identities=7% Similarity=-0.139 Sum_probs=49.1
Q ss_pred HHHHHHHHHHh-ChHHHHHHHHHHh-CC-CCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhH
Q 019785 147 KRILVDYMLRM-SYYETAEKLAESS-NI-QDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRL 223 (336)
Q Consensus 147 ~rlI~dyLlR~-G~~~tA~~L~~es-~i-~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~ 223 (336)
-..++..+... |.++.|..+.+.. .. ....+...+..+ ..-....|+.+.|++++.+--.. ..... ..+.
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~A~~~~~~~~~~---~~~~~--~~~~ 151 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNK--GICSAKQGQFGLAEAYLKRSLAA---QPQFP--PAFK 151 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHH--HHHHHHTTCHHHHHHHHHHHHHH---STTCH--HHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHH--HHHHHHcCCHHHHHHHHHHHHHh---CCCCc--hHHH
Confidence 34566667777 7777776555443 21 112223333222 22334678888888887655221 11112 2222
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 019785 224 QEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (336)
.--.-+.+.|+..+|+.+.++.+.
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~ 175 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQS 175 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Confidence 223334556788888888776554
No 45
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=27.85 E-value=3.8e+02 Score=25.08 Aligned_cols=22 Identities=5% Similarity=-0.213 Sum_probs=12.9
Q ss_pred HHHHHHHHHhChHHHHHHHHHH
Q 019785 148 RILVDYMLRMSYYETAEKLAES 169 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~e 169 (336)
..++.-+.+.|.++.|..+.++
T Consensus 411 ~~l~~~~~~~g~~~~A~~~~~~ 432 (597)
T 2xpi_A 411 IGFAHSFAIEGEHDQAISAYTT 432 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 3455666667776666554443
No 46
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=27.38 E-value=2.1e+02 Score=21.87 Aligned_cols=94 Identities=9% Similarity=-0.108 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHH
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQ 224 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q 224 (336)
.-..++..+++.|.++.|....+.. .+. ..+...+..+..+ .+..|+.+.|+.++..--. + +.. ....+..
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~--~~~~g~~~~A~~~~~~al~-~---~p~-~~~~~~~ 84 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAA--YSASGQHEKAAEDAELATV-V---DPK-YSKAWSR 84 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-H---CTT-CHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHH--HHHccCHHHHHHHHHHHHH-h---CCC-CHHHHHH
Confidence 3355677788888888876555442 332 2234444444333 3568999999999876522 1 111 1233344
Q ss_pred HHHHHHhcCChHHHHHHHHHhcc
Q 019785 225 EFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 225 ~fIELir~~~~~eAi~yar~~l~ 247 (336)
.-.-+.+.|+..+|+.+.++-+.
T Consensus 85 lg~~~~~~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 85 LGLARFDMADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHH
Confidence 44455677999999999987654
No 47
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=27.29 E-value=1.3e+02 Score=26.97 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=42.1
Q ss_pred HHcCChHHHHHHHHhhchhhhhcCCch-hHhhhHHHHHHHHhcCChHHHHHHHHHhccchh
Q 019785 191 LQNKEVAPALAWCSDNKSRLKKSKSKF-EFQLRLQEFIELVRGENNLRAITYARKYLAPWG 250 (336)
Q Consensus 191 L~~gdi~~AL~W~~~n~~~L~k~~s~L-eF~Lr~q~fIELir~~~~~eAi~yar~~l~~~~ 250 (336)
...|+.+.|+.++.+--....+.+... .-..+..--.-....|+..+|+.|.++-+.-+.
T Consensus 114 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~ 174 (383)
T 3ulq_A 114 LDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYK 174 (383)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 467888888888888766666655443 445555555556667888899999888876543
No 48
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=27.10 E-value=60 Score=22.75 Aligned_cols=22 Identities=14% Similarity=0.305 Sum_probs=17.6
Q ss_pred HHHHHHHH--cCChHHHHHHHHhh
Q 019785 185 KKVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 185 ~~I~~~L~--~gdi~~AL~W~~~n 206 (336)
.+.+.+|+ +||++.|++|+-.|
T Consensus 34 ~qA~kALKat~~NvErAaDWLFSH 57 (63)
T 1wgn_A 34 ECVLRAMKKKGENIEQILDYLFAH 57 (63)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhC
Confidence 35667774 69999999999776
No 49
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=27.02 E-value=23 Score=23.67 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=15.8
Q ss_pred HHHHHHH--cCChHHHHHHHHhh
Q 019785 186 KVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n 206 (336)
.++.+|+ +||++.|++|+-.|
T Consensus 29 ~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 29 ANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCHHHHHHHHHhC
Confidence 4666664 68999999998543
No 50
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=26.41 E-value=3.4e+02 Score=24.00 Aligned_cols=101 Identities=14% Similarity=0.046 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHh-CC----CCcc-cHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCC--c
Q 019785 145 RVKRILVDYMLRMSYYETAEKLAESS-NI----QDLV-DIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS--K 216 (336)
Q Consensus 145 ~l~rlI~dyLlR~G~~~tA~~L~~es-~i----~~~~-d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s--~ 216 (336)
......+.++.+.|.++.|..+.+++ .+ .+.. ..+.+..+..+ ....|+.+.|+.++.+--....+.+. .
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~--~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 181 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSES--YYYMKQTYFSMDYARQAYEIYKEHEAYNI 181 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHHHHTCSTTHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHHHHhCccchH
Confidence 44456788888899888887665553 33 2111 11222222222 22478888988888776554444332 1
Q ss_pred hhHhhhHHHHHHHHhcCChHHHHHHHHHhcc
Q 019785 217 FEFQLRLQEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 217 LeF~Lr~q~fIELir~~~~~eAi~yar~~l~ 247 (336)
.....+..--.-+...|+..+|+.|.++-+.
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 1111222222233445777777777766553
No 51
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=26.30 E-value=61 Score=22.52 Aligned_cols=25 Identities=20% Similarity=0.469 Sum_probs=18.9
Q ss_pred HHHHHHHH---cCChHHHHHHHHhhchh
Q 019785 185 KKVIDALQ---NKEVAPALAWCSDNKSR 209 (336)
Q Consensus 185 ~~I~~~L~---~gdi~~AL~W~~~n~~~ 209 (336)
.+++.+|+ +++++.|++|+-+|...
T Consensus 24 ~~a~~AL~~t~~~nve~A~ewLl~~~~d 51 (64)
T 1whc_A 24 GRAEKALALTGNQGIEAAMDWLMEHEDD 51 (64)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHhCCCC
Confidence 35666664 58999999999888543
No 52
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=25.90 E-value=4.6e+02 Score=25.77 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=47.4
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhchH------------
Q 019785 48 LRVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRT------------ 115 (336)
Q Consensus 48 ~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~ld~li~kl~~lkrkl~~~~~~------------ 115 (336)
+.+-||.+||+.-+.-+.+ .-.|.+.+.++.+ ....++.+.|+.++..+..+++.|......
T Consensus 46 ~~~~~e~~~~~~~~~~~e~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~g~~~~r~ 119 (526)
T 2de0_X 46 LGKDHEILRRRIENGAKEL---WFFLQSELKKLKN---LEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWRE 119 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred CChHHHHHHHHHHHhHHHH---HHHHHHHHHHhhc---cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhHHHH
Confidence 3456888888755544444 3334444455543 235567778888888888888776433221
Q ss_pred -H-HHHHHHHHHHHHhhhc
Q 019785 116 -E-HLQAQKCRARLNHLES 132 (336)
Q Consensus 116 -e-~~~~~~~~~Rl~~L~~ 132 (336)
+ ..+-...++||..++.
T Consensus 120 ~~~~~lt~~vq~~i~~~Qn 138 (526)
T 2de0_X 120 KEAKDLTELVQRRITYLQN 138 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 1 1344566778887773
No 53
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=25.68 E-value=2.6e+02 Score=22.45 Aligned_cols=93 Identities=9% Similarity=-0.048 Sum_probs=57.4
Q ss_pred HHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhH-----hhhH
Q 019785 150 LVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEF-----QLRL 223 (336)
Q Consensus 150 I~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF-----~Lr~ 223 (336)
++..+.+.|-++.|....+.. .+. +.+.+.+..+..+. ...|+.+.|++++.+--. ....+-.+ ..+.
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~--~~~~~~~~A~~~~~~al~---~~p~~~~~~~~~~~~~~ 121 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKN-YNLANAYIGKSAAY--RDMKNNQEYIATLTEGIK---AVPGNATIEKLYAIYYL 121 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTT-CSHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHH---HSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhC-cchHHHHHHHHHHH--HHcccHHHHHHHHHHHHH---HCCCcHHHHHHHHHHHH
Confidence 677788889888886555443 333 22344444444433 467999999999876522 11122222 2333
Q ss_pred HHHHHHHhcCChHHHHHHHHHhccc
Q 019785 224 QEFIELVRGENNLRAITYARKYLAP 248 (336)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~~ 248 (336)
..-.-+...|+..+|+.+.++-+.-
T Consensus 122 ~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 122 KEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHhHHHHHhccHHHHHHHHHHHHhc
Confidence 3334456779999999999987653
No 54
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.56 E-value=1.9e+02 Score=20.91 Aligned_cols=95 Identities=8% Similarity=-0.006 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHh-CCCCccc--HHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhh
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVD--IEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d--~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr 222 (336)
.-..++..+.+.|.++.|..+.++. .+..... ...+..+. .-.+..|+++.|+.++..--.. . ... ...+
T Consensus 30 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~~~~~-~--~~~--~~~~ 102 (148)
T 2dba_A 30 QLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRA--ACHLKLEDYDKAETEASKAIEK-D--GGD--VKAL 102 (148)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH--HHHHHTTCHHHHHHHHHHHHHH-T--SCC--HHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHHHHHccHHHHHHHHHHHHhh-C--ccC--HHHH
Confidence 3356677888888888887655543 4432210 22222222 2245789999999999775322 1 112 2333
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhcc
Q 019785 223 LQEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l~ 247 (336)
...-.-+...|+..+|+.+.++-+.
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3344445667999999999886654
No 55
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=25.19 E-value=3e+02 Score=23.02 Aligned_cols=96 Identities=20% Similarity=0.058 Sum_probs=49.4
Q ss_pred HHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCC----chhHhhhH
Q 019785 149 ILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKS----KFEFQLRL 223 (336)
Q Consensus 149 lI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s----~LeF~Lr~ 223 (336)
.++..+.+.|.++.|..+.++. .+. ..+...+..+.. -....|+.+.|+.++.+--....+... .-...++.
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~--~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 240 (330)
T 3hym_B 164 YIGLEYGLTNNSKLAERFFSQALSIA-PEDPFVMHEVGV--VAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLN 240 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhC-CCChHHHHHHHH--HHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHH
Confidence 3566666777777666555443 332 222333322222 234578888888887665443322111 11112222
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 019785 224 QEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (336)
.--.-+.+.|+..+|+.+.++-+.
T Consensus 241 ~la~~~~~~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 241 NLGHVCRKLKKYAEALDYHRQALV 264 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHh
Confidence 333334566788888888776553
No 56
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=25.08 E-value=4.2e+02 Score=24.68 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=30.9
Q ss_pred HHHHHHHHHHH--HHHHHHHhhhchHHHHHHHHHHHHHHhhhc
Q 019785 92 VNHLTSLVSRL--QGLKRKLEEGSRTEHLQAQKCRARLNHLES 132 (336)
Q Consensus 92 ~~~ld~li~kl--~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~~ 132 (336)
.+.++..++++ ..+|.-+++...+..+.++++..||+.|..
T Consensus 226 ~~a~e~~a~~~~d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~ 268 (365)
T 3fse_A 226 LEALEKYTEKESDVEAKALFQEMITNKQRHIEYLETYLTRLGE 268 (365)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44455555555 456677778888888999999999999983
No 57
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=24.96 E-value=2.7e+02 Score=22.39 Aligned_cols=66 Identities=12% Similarity=0.179 Sum_probs=41.2
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCChHHHHHHHHHHHHHHHHHHHHHhh
Q 019785 46 QFLRVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSE--NFSKDDAVNHLTSLVSRLQGLKRKLEE 111 (336)
Q Consensus 46 ~~~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~--~~~~~~~~~~ld~li~kl~~lkrkl~~ 111 (336)
..+|.-.+.+.|+|-.+++.+-|.-..-....-++.+.. ..+-.+..+.++.+.+.+..|++.++.
T Consensus 63 ~~Lrae~~~~QRn~~K~~~~Lkrn~~qQnQQSlDiRKLrELEADLKEKDsMVe~LT~TiG~LrKELEd 130 (167)
T 4gkw_A 63 GKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRKLGELEADLKEKDSMVESLTETIGILRKELEN 130 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhhhHHHhHhhhhHHHHHHHHhHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 456677778888888888888776554444333333321 223344556667777777778887764
No 58
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=24.67 E-value=2.2e+02 Score=21.16 Aligned_cols=92 Identities=14% Similarity=0.060 Sum_probs=57.2
Q ss_pred HHHHHHHHHhChHHHHHHHHHH-hCCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHH
Q 019785 148 RILVDYMLRMSYYETAEKLAES-SNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~e-s~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~f 226 (336)
+-.+.-+++.|-++.|...-++ ..+. +.+.+.+..+..+. ...|+.+.|++++..-- .+.. .. ...+...-
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~--~~~~~~~~A~~~~~~al-~~~p--~~--~~a~~~lg 88 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACL--TKLMEFQRALDDCDTCI-RLDS--KF--IKGYIRKA 88 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH--HHTTCHHHHHHHHHHHH-HHCT--TC--HHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHH--HhhccHHHHHHHHHHHH-Hhhh--hh--hHHHHHHH
Confidence 3457888899988888654443 2333 23455554444433 46799999999987642 1211 11 23344445
Q ss_pred HHHHhcCChHHHHHHHHHhcc
Q 019785 227 IELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 227 IELir~~~~~eAi~yar~~l~ 247 (336)
.-+...|+..+|+.+.++-+.
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 89 ACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHH
Confidence 556678999999999987553
No 59
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=24.27 E-value=2.9e+02 Score=22.52 Aligned_cols=75 Identities=9% Similarity=0.173 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc---CCCChHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHhhhc
Q 019785 58 TIRTNHRAVEKEITSVISNVADVSDS---ENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHLES 132 (336)
Q Consensus 58 ~fr~~qk~ieke~~~v~~~~~~l~~~---~~~~~~~~~~~ld~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L~~ 132 (336)
.|...++.+-+++-.-.+.|..|-.+ .+.+.++..+.|..+-+.+....+++.+...+-+..++++..-+..+.+
T Consensus 54 ~f~~~~~ela~dli~kakqIe~LIdsLPg~~~seeeQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~l~~ia~ 131 (151)
T 1yke_B 54 EFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSLIEDFVD 131 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666644443333333333222 2457788999999999999999999999988888888888888876653
No 60
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=24.03 E-value=2.1e+02 Score=20.67 Aligned_cols=93 Identities=12% Similarity=0.005 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHH
Q 019785 147 KRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (336)
Q Consensus 147 ~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~ 225 (336)
-..++..++..|.++.|....+.. .+. ..+.+.+..+..+ .+..|+.+.|+.++..--. +. .. ....+...
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~--~~~~~~~~~A~~~~~~al~-~~--p~--~~~~~~~l 83 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALC--YLKMQQPEQALADCRRALE-LD--GQ--SVKAHFFL 83 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HC--TT--CHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHHHHH--HHHhcCHHHHHHHHHHHHH-hC--ch--hHHHHHHH
Confidence 355677778888888776554432 332 2234444333333 3468999999999876532 11 11 22333444
Q ss_pred HHHHHhcCChHHHHHHHHHhcc
Q 019785 226 FIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 226 fIELir~~~~~eAi~yar~~l~ 247 (336)
-.-+...|+..+|+.+.++-+.
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 4456677999999999886654
No 61
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=23.96 E-value=30 Score=25.13 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=17.2
Q ss_pred HHHHHHHH--cCChHHHHHHHHhh
Q 019785 185 KKVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 185 ~~I~~~L~--~gdi~~AL~W~~~n 206 (336)
..++.+|+ +||++.|++|+-.+
T Consensus 45 ~~~~~AL~~t~Gnve~Ave~L~~~ 68 (74)
T 1vej_A 45 DANLQALVATDGDIHAAIEMLLGA 68 (74)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhC
Confidence 35667774 69999999998765
No 62
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=23.84 E-value=2.5e+02 Score=21.58 Aligned_cols=95 Identities=12% Similarity=-0.043 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHH
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~ 225 (336)
....++..+...|.++.|.......--....+.+.+..+..+ ....|+.+.|++++.+-- ...... ...+..-
T Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~--~~~~g~~~~A~~~~~~~l---~~~p~~--~~~~~~l 147 (184)
T 3vtx_A 75 AYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLV--YDSMGEHDKAIEAYEKTI---SIKPGF--IRAYQSI 147 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHH---HHCTTC--HHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHH--HHHhCCchhHHHHHHHHH---Hhcchh--hhHHHHH
Confidence 345567777788877777655544321122334444444333 346799999999887542 111112 2233334
Q ss_pred HHHHHhcCChHHHHHHHHHhcc
Q 019785 226 FIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 226 fIELir~~~~~eAi~yar~~l~ 247 (336)
-.-+.+.|+..+|+.+.++-+.
T Consensus 148 g~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 148 GLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHh
Confidence 4456678999999999987654
No 63
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=23.79 E-value=1.6e+02 Score=22.17 Aligned_cols=41 Identities=2% Similarity=0.102 Sum_probs=30.4
Q ss_pred hhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019785 41 LKLEHQFLRVPFEHYKKTIRTNHRAVEKEITSVISNVADVS 81 (336)
Q Consensus 41 l~le~~~~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~ 81 (336)
..+-..|++.|.+.+..........++.++..+...+..+.
T Consensus 57 ~~iG~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~ 97 (117)
T 2zqm_A 57 KTVGTLIVKTTKDKAVAELKEKIETLEVRLNALERQEKKLN 97 (117)
T ss_dssp EEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33557789999999988888888888777777666555543
No 64
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=23.53 E-value=2.1e+02 Score=20.59 Aligned_cols=57 Identities=11% Similarity=0.071 Sum_probs=34.1
Q ss_pred HHHcCChHHHHHHHHhhchhhhhcCC--chhHhhhHHHHHHHHhcCChHHHHHHHHHhc
Q 019785 190 ALQNKEVAPALAWCSDNKSRLKKSKS--KFEFQLRLQEFIELVRGENNLRAITYARKYL 246 (336)
Q Consensus 190 ~L~~gdi~~AL~W~~~n~~~L~k~~s--~LeF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (336)
....|+...|+.|...--........ .-.-.++.+--.-+.+.|+..+|+.+.++-+
T Consensus 15 ~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 15 AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 34678888888888776444432211 1112333333344567789999999888654
No 65
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=23.19 E-value=3.4e+02 Score=22.91 Aligned_cols=57 Identities=9% Similarity=0.118 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHh
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSD 205 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~ 205 (336)
+...++..+.+.|.++.|....++. .+. ..+.+.+..+..+. ...|+.+.|+.++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~--~~~~~~~~A~~~~~~ 213 (359)
T 3ieg_A 156 LRELRAECFIKEGEPRKAISDLKAASKLK-SDNTEAFYKISTLY--YQLGDHELSLSEVRE 213 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTC-SCCHHHHHHHHHHH--HHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH--HHcCCHHHHHHHHHH
Confidence 3445556666666666655444332 221 22233333222222 234555555555544
No 66
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=22.86 E-value=2e+02 Score=20.04 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhH
Q 019785 145 RVKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRL 223 (336)
Q Consensus 145 ~l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~ 223 (336)
..-..++..+.+.|.++.|..+.+.. .+. ..+...+..+..+ ....|+.+.|+.++..--.. . ... ...+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~--~~~~~~~~~A~~~~~~~~~~-~--~~~--~~~~~ 84 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAA--YSKLGNYAGAVQDCERAICI-D--PAY--SKAYG 84 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHHH-C--TTC--HHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHH--HHHhhchHHHHHHHHHHHhc-C--ccC--HHHHH
Confidence 34455677777888888876555443 222 2233333333333 35689999999998776332 1 111 22333
Q ss_pred HHHHHHHhcCChHHHHHHHHHhcc
Q 019785 224 QEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~ 247 (336)
..-.-+.+.|+..+|+.+.++-+.
T Consensus 85 ~~~~~~~~~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 85 RMGLALSSLNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHh
Confidence 333345667899999998886543
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=22.83 E-value=2.3e+02 Score=20.92 Aligned_cols=96 Identities=9% Similarity=-0.005 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhh
Q 019785 144 TRVKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (336)
Q Consensus 144 ~~l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr 222 (336)
...-..++..+++.|.++.|....+.. .+. ..+.+.+..+.. -....|+.+.|+.++.+--.. .... ...+
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~a~--~~~~~~~~~~A~~~~~~a~~~---~~~~--~~~~ 84 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSL--AYLRTECYGYALGDATRAIEL---DKKY--IKGY 84 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHH--HHHHTTCHHHHHHHHHHHHHH---CTTC--HHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHHHH--HHHHcCCHHHHHHHHHHHHHh---Cccc--HHHH
Confidence 344456777788888888886555442 222 223343333332 235689999999998765322 1111 2233
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhcc
Q 019785 223 LQEFIELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 223 ~q~fIELir~~~~~eAi~yar~~l~ 247 (336)
...-.-+.+.|+..+|+.+.++-+.
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3334445677999999999987654
No 68
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.73 E-value=61 Score=22.03 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=15.0
Q ss_pred HHHHHHH-cCC--hHHHHHHHHhh
Q 019785 186 KVIDALQ-NKE--VAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~-~gd--i~~AL~W~~~n 206 (336)
+.+.+|+ .|+ +++|++|+..-
T Consensus 25 rae~Alk~Tg~~Gle~AmewL~k~ 48 (54)
T 2cos_A 25 MAGRALKQTGSRSIEAALEYISKM 48 (54)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHh
Confidence 4566664 355 99999998754
No 69
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=22.70 E-value=46 Score=34.12 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHhC
Q 019785 147 KRILVDYMLRMSYYETAEKLAESSN 171 (336)
Q Consensus 147 ~rlI~dyLlR~G~~~tA~~L~~es~ 171 (336)
-|.++-|++|+|+.+.|..++++.+
T Consensus 155 ~Wa~IyY~LR~G~~~~A~e~~~~~~ 179 (661)
T 2qx5_A 155 IWALIFYLLRAGLIKEALQVLVENK 179 (661)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHTG
T ss_pred cHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 4789999999999999999998775
No 70
>1wyy_A E2 glycoprotein; membrane fusion, severe acute respiratory syndrome, viral PR; 2.20A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1wnc_A 2fxp_A
Probab=22.69 E-value=3.1e+02 Score=22.31 Aligned_cols=88 Identities=16% Similarity=0.252 Sum_probs=42.2
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHHHHH----HHHHHHHHhhhchHHHHHHHHH
Q 019785 48 LRVPFEHYKKTIRTNHRAVEKEITSVISNVADVSDSENFSKDDAVNHLTSLVSR----LQGLKRKLEEGSRTEHLQAQKC 123 (336)
Q Consensus 48 ~~vP~E~l~k~fr~~qk~ieke~~~v~~~~~~l~~~~~~~~~~~~~~ld~li~k----l~~lkrkl~~~~~~e~~~~~~~ 123 (336)
+-++-..|.++.+..-..+.+-+.++...|.... .++.++..++.+ |+.+-.++...-..=...++-+
T Consensus 9 l~~~~~vL~~NQk~iA~sFN~A~~~~~~g~~tts--------~AL~kiQ~VVN~q~~aL~~l~~qL~~nFgAISssi~dI 80 (149)
T 1wyy_A 9 IGVTQNVLYENQKQIANQFNKAISQIQESLTTTS--------TALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDI 80 (149)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3455566777766665555665555555554432 244455544443 3333333333333334556777
Q ss_pred HHHHHhhhccCcchhhhhcHHHHHHHHHHH
Q 019785 124 RARLNHLESADAENLAEWNNTRVKRILVDY 153 (336)
Q Consensus 124 ~~Rl~~L~~~~~~~~~~w~~~~l~rlI~dy 153 (336)
..|++.|.. ...+||+|.--
T Consensus 81 y~rLd~leA----------daQVDRLItGR 100 (149)
T 1wyy_A 81 LSRLDKVEA----------EVQIDRLITGG 100 (149)
T ss_dssp HHHHHHHHH----------HC---------
T ss_pred HHHHHHHHH----------HHHHHHHHhcc
Confidence 888887762 34567777544
No 71
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=22.46 E-value=4.8e+02 Score=24.37 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhChH-HHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhh
Q 019785 145 RVKRILVDYMLRMSYY-ETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLR 222 (336)
Q Consensus 145 ~l~rlI~dyLlR~G~~-~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr 222 (336)
..-..++..+.+.|.+ +.|....++. .+. .-+.+.+..+..+. ...|+++.|++++..-- +.+.. ...+
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~--~~~g~~~~A~~~~~~al----~~~p~--~~~~ 173 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVY--WKKGDVTSAHTCFSGAL----THCKN--KVSL 173 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHH--HHHTCHHHHHHHHHHHH----TTCCC--HHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHH--HHcCCHHHHHHHHHHHH----hhCCC--HHHH
Confidence 3445666777777777 7775544432 332 22344444444332 35688888888876542 22333 2333
Q ss_pred HHHHHHHHhc---------CChHHHHHHHHHhcc
Q 019785 223 LQEFIELVRG---------ENNLRAITYARKYLA 247 (336)
Q Consensus 223 ~q~fIELir~---------~~~~eAi~yar~~l~ 247 (336)
..--.-+... |+..+|+.+.++-+.
T Consensus 174 ~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 207 (474)
T 4abn_A 174 QNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ 207 (474)
T ss_dssp HHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH
Confidence 4434444455 777888888776543
No 72
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.30 E-value=80 Score=20.21 Aligned_cols=21 Identities=14% Similarity=0.246 Sum_probs=15.6
Q ss_pred HHHHHHH-cCChHHHHHHHHhh
Q 019785 186 KVIDALQ-NKEVAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~-~gdi~~AL~W~~~n 206 (336)
+.+.+|+ .||++.|++|+-.|
T Consensus 25 ~a~~AL~~~~n~e~A~~~L~~h 46 (47)
T 2ekk_A 25 HAMEALLNTSTMEQATEYLLTH 46 (47)
T ss_dssp HHHHHHHHSCSHHHHHHHHHTC
T ss_pred HHHHHHHHcCCHHHHHHHHHcC
Confidence 4556664 47999999998765
No 73
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=22.02 E-value=82 Score=22.12 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=17.2
Q ss_pred HHHHHHH--cCChHHHHHHHHhhc
Q 019785 186 KVIDALQ--NKEVAPALAWCSDNK 207 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n~ 207 (336)
...++|. +||++.|+.|+.+..
T Consensus 26 dcKkAL~e~~GDi~~Ai~~Lr~kg 49 (64)
T 2cp9_A 26 NCKKALETCGGDLKQAEIWLHKEA 49 (64)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHh
Confidence 3566774 799999999998764
No 74
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=21.99 E-value=84 Score=19.61 Aligned_cols=21 Identities=24% Similarity=0.333 Sum_probs=15.1
Q ss_pred HHHHHHH--cCChHHHHHHHHhh
Q 019785 186 KVIDALQ--NKEVAPALAWCSDN 206 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n 206 (336)
+.+.+|+ +||++.|++|+-.|
T Consensus 20 ~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 20 EAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTC
T ss_pred HHHHHHHHhCcCHHHHHHHHHcC
Confidence 3455553 68999999998654
No 75
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=21.87 E-value=30 Score=24.69 Aligned_cols=24 Identities=17% Similarity=0.516 Sum_probs=19.3
Q ss_pred hhccccc--cccHHHHHHHHHHHHHH
Q 019785 42 KLEHQFL--RVPFEHYKKTIRTNHRA 65 (336)
Q Consensus 42 ~le~~~~--~vP~E~l~k~fr~~qk~ 65 (336)
.+.-.+| .|||+.++..++.++|.
T Consensus 21 ~~~~~~~t~~VPy~rms~emQrI~r~ 46 (67)
T 1b33_N 21 ELQNTYFTKLVPYENWFREQQRIQKM 46 (67)
T ss_dssp CHHHHEEEEEEEHHHHHHHHHHHHHT
T ss_pred ccceEEEEEEecHHHHhHHHHHHHHc
Confidence 4557788 79999999999888763
No 76
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=21.84 E-value=2.2e+02 Score=20.24 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=26.8
Q ss_pred cccccHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhh
Q 019785 47 FLRVPFEHYKKT---IRTNHRAVEKEITSVISNVADVSD 82 (336)
Q Consensus 47 ~~~vP~E~l~k~---fr~~qk~ieke~~~v~~~~~~l~~ 82 (336)
.|+|.+|.|+.. |+.....|+..+..+...+..|..
T Consensus 6 ~i~v~~~~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~ 44 (99)
T 3zbh_A 6 VIRLTPEELRGVARQYNVESSNVTELIARLDQMSHTLQG 44 (99)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999988764 777788888888888888888754
No 77
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=21.18 E-value=3.1e+02 Score=21.74 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHH
Q 019785 147 KRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (336)
Q Consensus 147 ~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~ 225 (336)
-..++..+.+.|.++.|..+.++. .+. ..+.+.+..+.. -.+..|+.+.|+.++.+--.. ..... ..+..-
T Consensus 128 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~--~~~~~~~~~~A~~~~~~~~~~---~~~~~--~~~~~l 199 (243)
T 2q7f_A 128 FYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFGM--CLANEGMLDEALSQFAAVTEQ---DPGHA--DAFYNA 199 (243)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHH--HHHHHTCCHHHHHHHHHHHHH---CTTCH--HHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHHH--HHHHcCCHHHHHHHHHHHHHh---CcccH--HHHHHH
Confidence 344566666667666665444432 111 112222222222 223557777777766544211 11111 112222
Q ss_pred HHHHHhcCChHHHHHHHHHhc
Q 019785 226 FIELVRGENNLRAITYARKYL 246 (336)
Q Consensus 226 fIELir~~~~~eAi~yar~~l 246 (336)
..-+.+.|+..+|+.+.++-+
T Consensus 200 a~~~~~~~~~~~A~~~~~~~~ 220 (243)
T 2q7f_A 200 GVTYAYKENREKALEMLDKAI 220 (243)
T ss_dssp HHHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHH
Confidence 222344566777777666544
No 78
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=21.09 E-value=3.2e+02 Score=21.81 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhH
Q 019785 145 RVKRILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRL 223 (336)
Q Consensus 145 ~l~rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~ 223 (336)
.+-..++..+.+.|.++.|....++. .+. ..+...+..+..+ .+..|+.+.|+.++.+--. ..... ...+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~--~~~~~~~~~A~~~~~~al~---~~~~~--~~~~~ 211 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAA--LAKLMSFPEAIADCNKAIE---KDPNF--VRAYI 211 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH---HCTTC--HHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-cccHHHHHHHHHH--HHHhCCHHHHHHHHHHHHH---hCHHH--HHHHH
Confidence 34456788888999888887655543 222 2234444444333 3578999999999877622 11122 22333
Q ss_pred HHHHHHHhcCChHHHHHHHHHhccc
Q 019785 224 QEFIELVRGENNLRAITYARKYLAP 248 (336)
Q Consensus 224 q~fIELir~~~~~eAi~yar~~l~~ 248 (336)
..-.-+.+.|+..+|+.+.++-+.-
T Consensus 212 ~l~~~~~~~g~~~~A~~~~~~a~~~ 236 (258)
T 3uq3_A 212 RKATAQIAVKEYASALETLDAARTK 236 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 3344456679999999998876543
No 79
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=20.98 E-value=1.6e+02 Score=26.89 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHH
Q 019785 146 VKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQE 225 (336)
Q Consensus 146 l~rlI~dyLlR~G~~~tA~~L~~es~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~ 225 (336)
.-++.++|+. .+ ....|.+-.......+.. +..+..|.. ..|+++.|+.||.+. +....+.-..+++...
T Consensus 73 a~~~la~~~~-~~---a~~~l~~l~~~~~~~~~~-~~~la~i~~--~~g~~eeAL~~l~~~---i~~~~~~~~lea~~l~ 142 (310)
T 3mv2_B 73 VLDLYVQFLD-TK---NIEELENLLKDKQNSPYE-LYLLATAQA--ILGDLDKSLETCVEG---IDNDEAEGTTELLLLA 142 (310)
T ss_dssp HHHHHHHHHT-TT---CCHHHHHTTTTSCCCHHH-HHHHHHHHH--HHTCHHHHHHHHHHH---HTSSCSTTHHHHHHHH
T ss_pred HHHHHHHHhc-cc---HHHHHHHHHhcCCCCcHH-HHHHHHHHH--HcCCHHHHHHHHHHH---hccCCCcCcHHHHHHH
Confidence 4577888874 22 222333222211122222 223333333 369999999999886 2222113455666666
Q ss_pred HHHHHhcCChHHHHHHHHHh
Q 019785 226 FIELVRGENNLRAITYARKY 245 (336)
Q Consensus 226 fIELir~~~~~eAi~yar~~ 245 (336)
.--+++.|+...|.+..++.
T Consensus 143 vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 143 IEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHH
Confidence 66677889999999999753
No 80
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.79 E-value=85 Score=21.55 Aligned_cols=24 Identities=21% Similarity=0.452 Sum_probs=18.2
Q ss_pred HHHHHHH--cCChHHHHHHHHhhchh
Q 019785 186 KVIDALQ--NKEVAPALAWCSDNKSR 209 (336)
Q Consensus 186 ~I~~~L~--~gdi~~AL~W~~~n~~~ 209 (336)
+.+.+|+ ++|++.|++|+-.|.+.
T Consensus 25 ~a~~AL~~t~~nve~A~e~L~~~~~d 50 (63)
T 2dak_A 25 QALKALRATNNSLERAVDWIFSHIDD 50 (63)
T ss_dssp HHHHHHHHTTSCSHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 4556664 57899999999888654
No 81
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=20.68 E-value=2.3e+02 Score=20.00 Aligned_cols=36 Identities=6% Similarity=0.237 Sum_probs=29.2
Q ss_pred cccccHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhh
Q 019785 47 FLRVPFEHYKKT---IRTNHRAVEKEITSVISNVADVSD 82 (336)
Q Consensus 47 ~~~vP~E~l~k~---fr~~qk~ieke~~~v~~~~~~l~~ 82 (336)
.++|.+|.|+.. |+.....|+..+..+...+..|..
T Consensus 6 ~i~v~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~ 44 (93)
T 4ioe_A 6 EIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEG 44 (93)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578999998864 777788888888888888888754
No 82
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=20.58 E-value=4.6e+02 Score=23.42 Aligned_cols=103 Identities=8% Similarity=-0.093 Sum_probs=63.3
Q ss_pred hhhhhcHHHHHHHHHHHHHHhChHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCc
Q 019785 137 NLAEWNNTRVKRILVDYMLRMSYYETAEKLAESSNIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSK 216 (336)
Q Consensus 137 ~~~~w~~~~l~rlI~dyLlR~G~~~tA~~L~~es~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~ 216 (336)
.+..+++..+.-..+-.|...|-++-|..+....-....-+. .....-.-.++.|+++.|+..+.... +...+
T Consensus 95 ~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~---~~~~~a~l~~~~~r~~dA~~~l~~a~----~~~d~ 167 (282)
T 4f3v_A 95 TYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL---VAWMKAVVYGAAERWTDVIDQVKSAG----KWPDK 167 (282)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH---HHHHHHHHHHHTTCHHHHHHHHTTGG----GCSCH
T ss_pred ccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH---HHHHHHHHHHHcCCHHHHHHHHHHhh----ccCCc
Confidence 345678899998999999999999888777655433332222 22233335567788888888775331 11111
Q ss_pred h-hHhhhHHHHHHHHhcCChHHHHHHHHHhc
Q 019785 217 F-EFQLRLQEFIELVRGENNLRAITYARKYL 246 (336)
Q Consensus 217 L-eF~Lr~q~fIELir~~~~~eAi~yar~~l 246 (336)
+ .-..+..--.-+.+.|+..+|+.+.++-.
T Consensus 168 ~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 168 FLAGAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 1 12244444455666778888888777654
No 83
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=20.36 E-value=2.4e+02 Score=20.15 Aligned_cols=92 Identities=10% Similarity=0.005 Sum_probs=55.8
Q ss_pred HHHHHHHHHhChHHHHHHHHHHh-CCCCcccHHHHHHHHHHHHHHHcCChHHHHHHHHhhchhhhhcCCchhHhhhHHHH
Q 019785 148 RILVDYMLRMSYYETAEKLAESS-NIQDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEF 226 (336)
Q Consensus 148 rlI~dyLlR~G~~~tA~~L~~es-~i~~~~d~e~f~~~~~I~~~L~~gdi~~AL~W~~~n~~~L~k~~s~LeF~Lr~q~f 226 (336)
...+..+++.|.++.|....++. .+. +.+.+.+..+..+ .+..|+.+.|+.++..--. +.. .. ...+...-
T Consensus 8 ~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~--~~~~~~~~~A~~~~~~al~-~~p--~~--~~~~~~lg 79 (126)
T 3upv_A 8 RLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAA--LAKLMSFPEAIADCNKAIE-KDP--NF--VRAYIRKA 79 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH--HHHTTCHHHHHHHHHHHHH-HCT--TC--HHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHH--HHHhcCHHHHHHHHHHHHH-hCC--Cc--HHHHHHHH
Confidence 34567778888888776554432 332 2234444444333 3467999999999876521 111 11 23344445
Q ss_pred HHHHhcCChHHHHHHHHHhcc
Q 019785 227 IELVRGENNLRAITYARKYLA 247 (336)
Q Consensus 227 IELir~~~~~eAi~yar~~l~ 247 (336)
.-+...|+..+|+.+.++-+.
T Consensus 80 ~~~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 80 TAQIAVKEYASALETLDAART 100 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHH
Confidence 556677999999999987654
No 84
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=20.32 E-value=2.7e+02 Score=20.70 Aligned_cols=17 Identities=18% Similarity=-0.185 Sum_probs=9.3
Q ss_pred HhcCChHHHHHHHHHhc
Q 019785 230 VRGENNLRAITYARKYL 246 (336)
Q Consensus 230 ir~~~~~eAi~yar~~l 246 (336)
.+.|+..+|+.+.++-+
T Consensus 121 ~~~~~~~~A~~~~~~~~ 137 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIAL 137 (186)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHH
Confidence 34556666666655443
No 85
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=20.17 E-value=3.3e+02 Score=21.58 Aligned_cols=74 Identities=9% Similarity=0.192 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc---CCCChHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHhh
Q 019785 57 KTIRTNHRAVEKEITSVISNVADVSDS---ENFSKDDAVNHLTSLVSRLQGLKRKLEEGSRTEHLQAQKCRARLNHL 130 (336)
Q Consensus 57 k~fr~~qk~ieke~~~v~~~~~~l~~~---~~~~~~~~~~~ld~li~kl~~lkrkl~~~~~~e~~~~~~~~~Rl~~L 130 (336)
..|...++.+-+.+-.-...|..|-.+ .+.+.++..+.|..+-+.+....+++.+...+-+..++++..-+..+
T Consensus 53 ~~f~~~~~ela~dli~k~kqIe~LIdsLP~~~~see~Q~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~l~~i 129 (132)
T 1ykh_B 53 EEFSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDF 129 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366666666654443333333333222 14577888999999999999999999888888888888877766544
Done!