Query 019786
Match_columns 336
No_of_seqs 141 out of 1614
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 04:32:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019786.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019786hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 3.4E-38 7.4E-43 299.1 25.6 284 1-323 9-295 (302)
2 PTZ00343 triose or hexose phos 100.0 5.3E-36 1.1E-40 290.3 29.9 283 1-323 56-350 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.2E-36 7E-41 284.7 10.9 281 1-326 24-312 (316)
4 KOG1443 Predicted integral mem 99.9 3.7E-26 8.1E-31 210.5 19.6 281 1-322 23-316 (349)
5 PLN00411 nodulin MtN21 family 99.9 6.1E-25 1.3E-29 213.3 28.6 274 5-324 24-331 (358)
6 KOG1444 Nucleotide-sugar trans 99.9 5.6E-25 1.2E-29 204.9 20.7 282 2-327 20-306 (314)
7 TIGR00950 2A78 Carboxylate/Ami 99.9 1.8E-23 3.8E-28 193.2 29.0 251 9-316 4-259 (260)
8 PRK11689 aromatic amino acid e 99.9 2.4E-23 5.2E-28 197.1 29.3 257 6-321 16-287 (295)
9 PRK11272 putative DMT superfam 99.9 5.1E-23 1.1E-27 194.6 30.2 263 5-321 19-285 (292)
10 PF08449 UAA: UAA transporter 99.9 9.6E-23 2.1E-27 193.8 28.3 272 8-325 14-301 (303)
11 PRK10532 threonine and homoser 99.9 2.3E-22 5.1E-27 190.2 26.6 254 7-322 25-282 (293)
12 PRK11453 O-acetylserine/cystei 99.9 9.1E-22 2E-26 186.6 29.6 266 5-323 15-289 (299)
13 KOG1442 GDP-fucose transporter 99.9 3.9E-24 8.4E-29 194.4 12.3 285 2-330 36-336 (347)
14 PRK15430 putative chlorampheni 99.9 1E-21 2.2E-26 186.1 27.4 259 9-323 23-287 (296)
15 PF06027 DUF914: Eukaryotic pr 99.9 3.7E-22 8E-27 191.1 24.3 273 6-325 25-309 (334)
16 TIGR03340 phn_DUF6 phosphonate 99.9 1E-19 2.3E-24 171.0 22.5 259 8-318 15-280 (281)
17 COG0697 RhaT Permeases of the 99.8 3.3E-17 7.2E-22 152.1 29.7 259 11-322 24-288 (292)
18 COG5006 rhtA Threonine/homoser 99.8 4.7E-18 1E-22 153.5 21.0 249 12-321 30-282 (292)
19 TIGR00688 rarD rarD protein. T 99.8 5.4E-17 1.2E-21 150.3 24.7 235 6-296 14-255 (256)
20 COG5070 VRG4 Nucleotide-sugar 99.8 5.5E-18 1.2E-22 150.5 15.9 275 2-325 14-300 (309)
21 TIGR00776 RhaT RhaT L-rhamnose 99.7 4.5E-15 9.7E-20 140.5 24.3 251 9-321 16-288 (290)
22 PF03151 TPT: Triose-phosphate 99.7 8.5E-16 1.8E-20 130.9 16.1 145 177-321 1-153 (153)
23 KOG1581 UDP-galactose transpor 99.7 4.7E-15 1E-19 137.4 21.8 258 20-325 48-317 (327)
24 KOG1580 UDP-galactose transpor 99.7 8.7E-16 1.9E-20 137.5 13.3 255 19-320 49-312 (337)
25 PF04142 Nuc_sug_transp: Nucle 99.7 1.2E-14 2.7E-19 134.2 20.5 213 53-312 13-244 (244)
26 KOG4510 Permease of the drug/m 99.6 1.2E-16 2.7E-21 145.3 3.9 266 5-324 49-328 (346)
27 COG2962 RarD Predicted permeas 99.6 1.3E-12 2.7E-17 121.1 26.6 262 9-325 22-287 (293)
28 KOG2765 Predicted membrane pro 99.6 2.3E-14 4.9E-19 136.1 14.0 222 57-324 159-393 (416)
29 KOG2234 Predicted UDP-galactos 99.5 1.6E-12 3.5E-17 123.3 23.2 225 55-326 90-327 (345)
30 KOG1583 UDP-N-acetylglucosamin 99.5 4.6E-13 1E-17 122.6 11.1 267 13-327 22-320 (330)
31 KOG1582 UDP-galactose transpor 99.4 1.5E-12 3.3E-17 119.0 14.0 255 20-323 71-334 (367)
32 KOG3912 Predicted integral mem 99.4 4.3E-11 9.3E-16 110.1 17.9 224 58-321 87-334 (372)
33 KOG2766 Predicted membrane pro 99.2 1.7E-11 3.7E-16 111.4 3.4 266 6-326 30-304 (336)
34 PF00892 EamA: EamA-like trans 99.1 3.6E-10 7.7E-15 91.8 8.6 120 6-166 3-124 (126)
35 PF00892 EamA: EamA-like trans 99.0 2E-09 4.4E-14 87.3 10.8 124 186-320 1-125 (126)
36 TIGR00803 nst UDP-galactose tr 99.0 1.3E-09 2.9E-14 98.9 10.5 179 130-319 12-222 (222)
37 COG2510 Predicted membrane pro 99.0 1.7E-09 3.8E-14 88.7 9.6 134 178-320 5-138 (140)
38 PF06800 Sugar_transport: Suga 98.9 2.1E-07 4.4E-12 86.8 20.6 212 53-318 41-268 (269)
39 KOG4314 Predicted carbohydrate 98.8 1.5E-08 3.3E-13 89.2 7.6 220 56-323 52-278 (290)
40 COG2510 Predicted membrane pro 98.8 6.5E-08 1.4E-12 79.6 10.7 123 6-168 15-139 (140)
41 PF13536 EmrE: Multidrug resis 98.8 1.1E-08 2.3E-13 83.4 6.2 105 28-172 2-110 (113)
42 PRK15430 putative chlorampheni 98.8 4.5E-07 9.7E-12 86.0 18.1 141 172-320 4-144 (296)
43 TIGR00688 rarD rarD protein. T 98.7 7.7E-07 1.7E-11 82.3 17.1 139 176-319 2-140 (256)
44 TIGR03340 phn_DUF6 phosphonate 98.6 1.4E-06 3E-11 81.9 15.7 132 178-320 3-134 (281)
45 PLN00411 nodulin MtN21 family 98.4 8.7E-06 1.9E-10 79.5 16.7 135 177-320 14-155 (358)
46 TIGR00950 2A78 Carboxylate/Ami 98.3 8.2E-06 1.8E-10 75.1 13.3 118 6-163 140-259 (260)
47 PF05653 Mg_trans_NIPA: Magnes 98.2 8.8E-06 1.9E-10 77.6 9.2 64 65-167 58-121 (300)
48 PRK11689 aromatic amino acid e 98.1 0.00011 2.4E-09 69.6 15.9 130 176-321 4-137 (295)
49 PTZ00343 triose or hexose phos 98.1 0.00018 3.9E-09 70.0 17.4 139 174-321 47-186 (350)
50 PRK11272 putative DMT superfam 98.1 0.00022 4.8E-09 67.4 16.9 128 179-320 11-140 (292)
51 PRK11453 O-acetylserine/cystei 98.0 0.00017 3.7E-09 68.4 15.3 123 179-320 7-131 (299)
52 PRK02971 4-amino-4-deoxy-L-ara 98.0 0.00015 3.3E-09 60.6 13.1 119 176-322 2-123 (129)
53 PRK15051 4-amino-4-deoxy-L-ara 98.0 8.4E-05 1.8E-09 60.5 10.3 65 65-168 45-109 (111)
54 TIGR00817 tpt Tpt phosphate/ph 97.9 0.00021 4.6E-09 67.7 13.8 121 189-320 15-136 (302)
55 COG2962 RarD Predicted permeas 97.8 0.001 2.2E-08 62.3 15.4 138 173-319 4-142 (293)
56 PRK10532 threonine and homoser 97.8 0.00031 6.7E-09 66.5 12.2 118 8-167 162-280 (293)
57 PF13536 EmrE: Multidrug resis 97.7 0.0011 2.3E-08 53.8 12.1 71 253-324 38-109 (113)
58 PRK13499 rhamnose-proton sympo 97.7 0.0098 2.1E-07 57.7 20.5 227 52-322 68-342 (345)
59 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.00094 2E-08 63.3 12.5 132 177-323 2-138 (290)
60 COG0697 RhaT Permeases of the 97.4 0.01 2.2E-07 54.6 16.4 140 174-324 5-146 (292)
61 PRK15051 4-amino-4-deoxy-L-ara 97.3 0.0031 6.6E-08 51.3 10.5 54 267-320 55-108 (111)
62 PF08449 UAA: UAA transporter 97.3 0.0043 9.3E-08 59.0 12.7 125 188-325 12-140 (303)
63 COG4975 GlcU Putative glucose 97.2 0.00012 2.6E-09 66.9 1.3 217 52-322 54-286 (288)
64 PF03151 TPT: Triose-phosphate 97.1 0.0085 1.8E-07 50.5 11.7 122 6-166 12-151 (153)
65 PRK02971 4-amino-4-deoxy-L-ara 97.1 0.0015 3.2E-08 54.7 6.3 73 59-170 50-124 (129)
66 KOG2922 Uncharacterized conser 97.1 0.0024 5.2E-08 60.6 8.3 218 63-323 70-308 (335)
67 PF04142 Nuc_sug_transp: Nucle 96.9 0.0032 7E-08 58.3 7.9 77 249-325 17-93 (244)
68 PF06027 DUF914: Eukaryotic pr 96.9 0.016 3.6E-07 56.0 12.8 69 255-323 85-153 (334)
69 PRK10452 multidrug efflux syst 96.8 0.0063 1.4E-07 50.2 7.6 56 268-323 49-105 (120)
70 PF04657 DUF606: Protein of un 96.6 0.079 1.7E-06 44.7 13.5 129 178-317 3-137 (138)
71 PRK10452 multidrug efflux syst 96.6 0.011 2.4E-07 48.8 8.0 72 60-169 33-104 (120)
72 PRK10650 multidrug efflux syst 96.5 0.11 2.5E-06 42.1 13.2 53 268-320 54-107 (109)
73 PRK09541 emrE multidrug efflux 96.5 0.012 2.6E-07 47.8 7.3 72 60-169 33-104 (110)
74 PRK11431 multidrug efflux syst 96.4 0.02 4.3E-07 46.2 7.9 71 59-167 31-101 (105)
75 PRK09541 emrE multidrug efflux 96.4 0.024 5.2E-07 46.1 8.4 55 268-322 49-104 (110)
76 COG2076 EmrE Membrane transpor 96.3 0.037 8E-07 44.6 8.8 54 269-322 50-104 (106)
77 PRK10650 multidrug efflux syst 96.2 0.034 7.5E-07 45.1 8.4 69 60-166 38-106 (109)
78 COG2076 EmrE Membrane transpor 96.0 0.02 4.3E-07 46.1 6.2 72 59-168 32-103 (106)
79 PRK11431 multidrug efflux syst 96.0 0.082 1.8E-06 42.6 9.5 54 268-321 48-102 (105)
80 PRK13499 rhamnose-proton sympo 95.8 0.28 6.2E-06 47.7 14.1 140 174-321 5-153 (345)
81 PF05653 Mg_trans_NIPA: Magnes 95.2 0.13 2.8E-06 49.2 9.4 117 173-319 4-120 (300)
82 PF00893 Multi_Drug_Res: Small 94.8 0.12 2.6E-06 40.5 6.8 59 62-158 34-92 (93)
83 PF04657 DUF606: Protein of un 94.8 0.31 6.7E-06 41.2 9.6 118 9-165 16-138 (138)
84 COG5006 rhtA Threonine/homoser 94.4 0.26 5.6E-06 45.7 8.7 69 57-164 209-278 (292)
85 KOG2234 Predicted UDP-galactos 94.1 3.1 6.7E-05 40.4 15.8 117 202-320 45-163 (345)
86 PF06800 Sugar_transport: Suga 94.1 0.36 7.9E-06 45.3 9.4 71 55-164 193-267 (269)
87 COG3238 Uncharacterized protei 94.0 2.4 5.3E-05 36.3 13.5 136 175-320 4-145 (150)
88 PF07857 DUF1632: CEO family ( 93.9 0.088 1.9E-06 49.0 4.9 131 177-325 1-138 (254)
89 PF00893 Multi_Drug_Res: Small 93.5 0.33 7.2E-06 38.0 6.8 45 268-312 48-93 (93)
90 TIGR00803 nst UDP-galactose tr 92.2 0.82 1.8E-05 41.2 8.5 65 62-165 157-221 (222)
91 PF10639 UPF0546: Uncharacteri 91.5 0.58 1.3E-05 38.2 6.0 71 57-166 42-112 (113)
92 KOG2765 Predicted membrane pro 90.8 0.22 4.8E-06 48.5 3.4 76 250-325 160-235 (416)
93 KOG4314 Predicted carbohydrate 90.5 0.22 4.7E-06 44.6 2.7 67 262-328 66-132 (290)
94 KOG4510 Permease of the drug/m 89.4 0.15 3.2E-06 47.7 0.8 133 175-321 37-169 (346)
95 PF06379 RhaT: L-rhamnose-prot 88.4 21 0.00046 34.7 14.7 139 175-325 6-157 (344)
96 KOG1444 Nucleotide-sugar trans 82.8 32 0.00069 33.1 12.8 132 178-320 14-148 (314)
97 COG3238 Uncharacterized protei 82.3 13 0.00029 31.8 9.1 121 9-167 20-145 (150)
98 PF10639 UPF0546: Uncharacteri 81.9 2.6 5.7E-05 34.4 4.5 52 267-318 59-111 (113)
99 KOG1441 Glucose-6-phosphate/ph 78.8 20 0.00043 34.6 10.2 124 189-322 30-178 (316)
100 COG4975 GlcU Putative glucose 77.8 1.5 3.3E-05 40.6 2.1 98 27-165 181-282 (288)
101 KOG1580 UDP-galactose transpor 75.2 7.6 0.00017 35.9 5.8 73 55-166 239-311 (337)
102 KOG2922 Uncharacterized conser 69.4 3.1 6.6E-05 40.0 2.0 118 172-319 17-134 (335)
103 COG5070 VRG4 Nucleotide-sugar 60.6 1.3E+02 0.0027 27.9 10.5 62 265-326 84-145 (309)
104 KOG1581 UDP-galactose transpor 60.5 1.1E+02 0.0025 29.4 10.6 126 187-325 25-159 (327)
105 KOG3912 Predicted integral mem 53.6 37 0.0008 32.4 6.0 52 269-320 106-157 (372)
106 PF03812 KdgT: 2-keto-3-deoxyg 50.1 2.4E+02 0.0053 27.2 11.1 136 74-231 114-280 (314)
107 PF04342 DUF486: Protein of un 42.1 37 0.00079 27.4 3.6 28 290-317 77-104 (108)
108 COG4147 DhlC Predicted symport 40.7 1.6E+02 0.0036 30.1 8.7 71 254-324 427-509 (529)
109 PRK02237 hypothetical protein; 39.8 72 0.0016 25.8 4.9 45 277-321 61-105 (109)
110 PF05977 MFS_3: Transmembrane 38.1 4.7E+02 0.01 26.9 13.4 26 271-296 342-367 (524)
111 PF07444 Ycf66_N: Ycf66 protei 37.0 39 0.00085 26.1 2.9 31 300-330 4-34 (84)
112 PF06379 RhaT: L-rhamnose-prot 36.9 4.1E+02 0.0089 26.0 19.5 235 53-321 69-340 (344)
113 TIGR00793 kdgT 2-keto-3-deoxyg 36.5 4E+02 0.0087 25.7 12.1 134 76-231 116-280 (314)
114 PF02694 UPF0060: Uncharacteri 36.2 75 0.0016 25.6 4.5 45 278-322 60-104 (107)
115 PRK02237 hypothetical protein; 35.9 41 0.0009 27.2 3.0 40 130-169 67-106 (109)
116 PF02694 UPF0060: Uncharacteri 35.1 42 0.0009 27.1 2.9 40 130-169 65-104 (107)
117 COG1742 Uncharacterized conser 30.9 79 0.0017 25.4 3.8 41 130-170 66-106 (109)
118 COG4657 RnfA Predicted NADH:ub 24.4 1.7E+02 0.0036 25.6 5.0 64 136-199 85-155 (193)
119 COG2807 CynX Cyanate permease 24.3 7.2E+02 0.016 24.8 9.9 61 130-194 53-119 (395)
120 PRK10655 potE putrescine trans 24.1 6.9E+02 0.015 24.5 10.8 23 304-326 409-431 (438)
121 PRK10263 DNA translocase FtsK; 21.4 8.6E+02 0.019 28.4 10.9 28 120-147 74-101 (1355)
122 cd01324 cbb3_Oxidase_CcoQ Cyto 20.0 1.2E+02 0.0027 20.6 2.7 20 309-328 19-38 (48)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=3.4e-38 Score=299.14 Aligned_cols=284 Identities=62% Similarity=1.008 Sum_probs=241.0
Q ss_pred CeeehHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019786 1 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA 80 (336)
Q Consensus 1 ~w~~~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ 80 (336)
+||++|+..+++||+.++++++|..++++|+.++.+.+.+.+..+.+++.+.++++++++++.|++++.++.+.|.++++
T Consensus 9 ~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~ 88 (302)
T TIGR00817 9 LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSK 88 (302)
T ss_pred HHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 49999999999999999999999999999999998877666544455566778999999999999999999999999999
Q ss_pred cchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHh
Q 019786 81 VAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVV 160 (336)
Q Consensus 81 ~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~ 160 (336)
++++++++++ ++.|+++++++++++|||++++++.++++++
T Consensus 89 ~s~s~~~li~---------------------------------------~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~ 129 (302)
T TIGR00817 89 VAVSFTHTIK---------------------------------------AMEPFFSVVLSAFFLGQEFPSTLWLSLLPIV 129 (302)
T ss_pred ccHHHHHHHH---------------------------------------hcchHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999999
Q ss_pred hhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhc--CCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchh
Q 019786 161 IGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSD 238 (336)
Q Consensus 161 ~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (336)
+|+.+...++.+++..|++++++|++++++++++.||..+ +.|+.+++.|+...+.+.+.|.....|++....+++.+
T Consensus 130 ~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 209 (302)
T TIGR00817 130 GGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ 209 (302)
T ss_pred HHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 9999887777778888999999999999999999999988 89999999999999999999998777754332211111
Q ss_pred hhhhhchHHHHHHHHHHHH-HHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHH
Q 019786 239 AISKVGMVKFISDLFWVGM-FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVA 317 (336)
Q Consensus 239 ~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~ 317 (336)
..........+...+..+. .....|...+..+++++|.+.++.+.+||+.++++|++++||++|..+++|.+++++|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~ 289 (302)
T TIGR00817 210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF 289 (302)
T ss_pred hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence 0000111122322333333 344566677789999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh
Q 019786 318 AYSYIK 323 (336)
Q Consensus 318 ~~~~~~ 323 (336)
+|+..|
T Consensus 290 l~~~~k 295 (302)
T TIGR00817 290 LYSRVK 295 (302)
T ss_pred HHHHHh
Confidence 998643
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=5.3e-36 Score=290.30 Aligned_cols=283 Identities=37% Similarity=0.642 Sum_probs=242.8
Q ss_pred CeeehHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019786 1 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI--DSKLLKLLIPVAVCHALGHVTSNVSF 78 (336)
Q Consensus 1 ~w~~~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~sl 78 (336)
+||.+|+..++.||++++++|+|+.++.+|++++.+++.+.+..+.+++++. .+++++.+++.|+++...+...+.|+
T Consensus 56 ~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl 135 (350)
T PTZ00343 56 TWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISM 135 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4999999999999999999999999999999999887766665554443434 34588999999999988888889999
Q ss_pred cccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHH
Q 019786 79 AAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAP 158 (336)
Q Consensus 79 ~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~ 158 (336)
++++++++++++ +++|+++++++++++|||++++++.++++
T Consensus 136 ~~~svs~~~iik---------------------------------------a~~Pvft~lls~~~l~ek~s~~~~l~l~l 176 (350)
T PTZ00343 136 GLGAVSFTHVVK---------------------------------------AAEPVFTALLSILFLKQFLNLYAYLSLIP 176 (350)
T ss_pred hhccHHHHHHHH---------------------------------------HhhHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999
Q ss_pred HhhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhcC-------CChhhHHHHHHHHHHHHHHHHHHHhhCchh
Q 019786 159 VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVEGPQL 231 (336)
Q Consensus 159 ~~~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~-------~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~ 231 (336)
+++|+.+.+.+|.++++.|++++++|+++++.|+++.||.+++ .++.++..+....+.++++|.....|++..
T Consensus 177 ~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~ 256 (350)
T PTZ00343 177 IVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKW 256 (350)
T ss_pred HHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999998888889999999999999999999999998864 457778888899999999999887775432
Q ss_pred hhccchh---hhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHH
Q 019786 232 IKHGLSD---AISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIG 308 (336)
Q Consensus 232 ~~~~~~~---~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G 308 (336)
.. .+.. ..........+..++..++.+++.|.+.+..+++++|.++++.+.+||++++++|++++||++|..+++|
T Consensus 257 ~~-~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG 335 (350)
T PTZ00343 257 VP-VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLG 335 (350)
T ss_pred HH-HHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHH
Confidence 11 1100 0111111233445667788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 019786 309 TVIAIAGVAAYSYIK 323 (336)
Q Consensus 309 ~~li~~gv~~~~~~~ 323 (336)
.++++.|+.+|++.|
T Consensus 336 ~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 336 MAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHhhcC
Confidence 999999999998753
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-36 Score=284.71 Aligned_cols=281 Identities=39% Similarity=0.560 Sum_probs=250.5
Q ss_pred CeeehHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHHHHHHhhhhhhhh
Q 019786 1 MWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID-SKLLKLLIPVAVCHALGHVTSNVS 77 (336)
Q Consensus 1 ~w~~~s~~~~i~nK~~~~--~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s 77 (336)
.||.+|++.++.||++++ +||+|++++..|.+.+.+.....+..+.+++.+.+ +..++.+++.|++++++++++|.|
T Consensus 24 ~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~S 103 (316)
T KOG1441|consen 24 IWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVS 103 (316)
T ss_pred HHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchh
Confidence 499999999999999999 79999999999999999988888877777766654 458999999999999999999999
Q ss_pred ccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHH
Q 019786 78 FAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLA 157 (336)
Q Consensus 78 l~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~ 157 (336)
+++++++++|++| +++|+++.++++++.+|+.++..+++++
T Consensus 104 l~~v~VsF~q~iK---------------------------------------a~~P~~tvl~~~~~~~~~~s~~~~lsL~ 144 (316)
T KOG1441|consen 104 LSYVPVSFYQTIK---------------------------------------ALMPPFTVLLSVLLLGKTYSSMTYLSLL 144 (316)
T ss_pred hhccchhHHHHHH---------------------------------------hhcchhHHHHHHHHhCCCCcceEEEEEE
Confidence 9999999999999 9999999999999999999999999999
Q ss_pred HHhhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhc----CCChhhHHHHHHHHHHHHHH-HHHHHhhCchhh
Q 019786 158 PVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVEGPQLI 232 (336)
Q Consensus 158 ~~~~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~----~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~ 232 (336)
..+.||.+.+.+|.++|+.|++.++.+.+..+.++++.|+.++ +.|+.+++.|+.+++.+.++ |.....|++..
T Consensus 145 piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~- 223 (316)
T KOG1441|consen 145 PIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF- 223 (316)
T ss_pred EeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-
Confidence 9999999999999999999999999999999999999999984 48999999999999999999 88777777654
Q ss_pred hccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHH
Q 019786 233 KHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 312 (336)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li 312 (336)
. ++... .... ..+..+.. .++++++|.+.|..++++||+|+++.+.+|++.++..|+++|+|+.|+.|..|+++.
T Consensus 224 ~-~~~~~--~~~~-~~~~~~~~-sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~ia 298 (316)
T KOG1441|consen 224 V-GFLTA--PWFV-TFLILLLN-SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIA 298 (316)
T ss_pred e-eeecc--ccch-hhHHHHHH-HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHH
Confidence 1 11110 1111 12333333 389999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHH
Q 019786 313 IAGVAAYSYIKAQM 326 (336)
Q Consensus 313 ~~gv~~~~~~~~~~ 326 (336)
++|+.+|++.|.+.
T Consensus 299 i~Gv~~Y~~~k~~~ 312 (316)
T KOG1441|consen 299 ILGVFLYSRAKLKE 312 (316)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999876553
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.94 E-value=3.7e-26 Score=210.49 Aligned_cols=281 Identities=20% Similarity=0.284 Sum_probs=239.8
Q ss_pred CeeehHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCC---CCCCCCCH-HHHHHHHHHHHHHHHhhhhhh
Q 019786 1 MWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGL---PKRAPIDS-KLLKLLIPVAVCHALGHVTSN 75 (336)
Q Consensus 1 ~w~~~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~-~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 75 (336)
+||++|+++..++|+.-.+|++|.+++..|+++-.++.....+ .+. ++|.+.++ +..|+..|.|++.++++.++|
T Consensus 23 ~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN 102 (349)
T KOG1443|consen 23 LYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSN 102 (349)
T ss_pred HHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhccccccc
Confidence 5999999999999999888999999999999999887665433 111 22334444 578899999999999999999
Q ss_pred hhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHH
Q 019786 76 VSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLS 155 (336)
Q Consensus 76 ~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~s 155 (336)
+|++|++++.+++.| ++.++|+.+++..+.-||+++...+.
T Consensus 103 ~sl~yVtlSlYTM~K---------------------------------------SSsi~FIllFs~if~lEk~~w~L~l~ 143 (349)
T KOG1443|consen 103 WSLEYVTLSLYTMTK---------------------------------------SSSILFILLFSLIFKLEKFRWALVLI 143 (349)
T ss_pred ceeeeeeeeeeeecc---------------------------------------ccHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999 77777777777777778999999999
Q ss_pred HHHHhhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CChhhHHHHHHHHHHHHHHHHHHHhhCch
Q 019786 156 LAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVEGPQ 230 (336)
Q Consensus 156 l~~~~~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~-----~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 230 (336)
+.++.+|+.+....+.+++..|+.+.+.|..+.+++..+.+..+++ -+|....++..+.+.+.++|..+..|++.
T Consensus 144 v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~ 223 (349)
T KOG1443|consen 144 VLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLH 223 (349)
T ss_pred HHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccc
Confidence 9999999999999999999999999999999999999998888765 45899999999999999999999999986
Q ss_pred hhhccchhhhhhh---chHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhH
Q 019786 231 LIKHGLSDAISKV---GMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGI 307 (336)
Q Consensus 231 ~~~~~~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~ 307 (336)
... ++..+... ........+...|..+++...+.+..+.+++.++.|+.+..|.+.+.++|..+.+|.+|..+|.
T Consensus 224 ~~~--~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~ 301 (349)
T KOG1443|consen 224 LIT--SSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWL 301 (349)
T ss_pred cch--hhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHH
Confidence 542 11122222 2234456666778889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 019786 308 GTVIAIAGVAAYSYI 322 (336)
Q Consensus 308 G~~li~~gv~~~~~~ 322 (336)
|..+..+|+..|...
T Consensus 302 Gl~i~~agi~~~~~~ 316 (349)
T KOG1443|consen 302 GLAICLAGILLHRNE 316 (349)
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999999443
No 5
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.94 E-value=6.1e-25 Score=213.30 Aligned_cols=274 Identities=13% Similarity=0.102 Sum_probs=208.6
Q ss_pred hHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CC-CCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccc
Q 019786 5 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVA 82 (336)
Q Consensus 5 ~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~ 82 (336)
++.+..++.|..++.--.|..+.++|+.++.+.+.+.... ++ +++++.+++++..+...|++..+...+.+.++++++
T Consensus 24 ~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~ts 103 (358)
T PLN00411 24 SVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSN 103 (358)
T ss_pred HHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4667889999999874458889999999998776654432 22 222334567778888888877556668999999999
Q ss_pred hhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHH------hcCcCChhhHHHH
Q 019786 83 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFI------LGQQLPLTLWLSL 156 (336)
Q Consensus 83 vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~------l~~~~~~~~~~sl 156 (336)
.+.+.++. ++.|+++++++.++ +|||++++++.++
T Consensus 104 a~~asll~---------------------------------------~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~ 144 (358)
T PLN00411 104 PTLASAIS---------------------------------------NITPALTFILAIIFRMEKVSFKERSSVAKVMGT 144 (358)
T ss_pred HHHHHHHH---------------------------------------HhhHHHHHHHHHHHHhchhhhcccccHHHHHHH
Confidence 99999999 99999999999999 6999999999999
Q ss_pred HHHhhhheeeecc-cc-----------------------ccc-HHHHHHHHHHHHHHHHHHHHHhhhhcCCChh-hHHHH
Q 019786 157 APVVIGVSMASLT-EL-----------------------SFN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYAY 210 (336)
Q Consensus 157 ~~~~~Gv~l~~~~-~~-----------------------~~~-~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~-~l~~~ 210 (336)
+++++|+.++... +. +.+ ..|.++++.|+++||+|++++||..++.++. ....+
T Consensus 145 ~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~ 224 (358)
T PLN00411 145 ILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFL 224 (358)
T ss_pred HHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHH
Confidence 9999999976431 10 112 4599999999999999999999998887664 56667
Q ss_pred HHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHH
Q 019786 211 ISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVI 290 (336)
Q Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~ 290 (336)
+...+.+.+.++....|+.+... |.. .... ..+ .++..++...+.....++++++.+|...++..+++|+++.
T Consensus 225 ~~~~~~~~~~~~~l~~~~~~~~~--~~~---~~~~-~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~ 297 (358)
T PLN00411 225 YTVCVSIVTSMIGLVVEKNNPSV--WII---HFDI-TLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAV 297 (358)
T ss_pred HHHHHHHHHHHHHHHHccCCccc--cee---ccch-HHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHH
Confidence 77777777766666655422111 110 0111 111 2333444433444455678999999999999999999999
Q ss_pred HHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhH
Q 019786 291 GFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 324 (336)
Q Consensus 291 i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~ 324 (336)
++|++++||++++.+++|++++++|+.+.+..++
T Consensus 298 llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~ 331 (358)
T PLN00411 298 VMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA 331 (358)
T ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999875443
No 6
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=5.6e-25 Score=204.87 Aligned_cols=282 Identities=18% Similarity=0.241 Sum_probs=245.4
Q ss_pred eeehHHHHHHHHHHHHhhCCchHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019786 2 WYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA 79 (336)
Q Consensus 2 w~~~s~~~~i~nK~~~~~f~~p~~l~~--~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~ 79 (336)
|..+|+..++.||++++++++|..+.. .|.+.+.+........|.-+.++++++..|.++|+++.+.+...++..+++
T Consensus 20 Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk 99 (314)
T KOG1444|consen 20 YCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLK 99 (314)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcccccc
Confidence 467899999999999999888887766 999999998888888888888889999999999999999999999999999
Q ss_pred ccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHH
Q 019786 80 AVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPV 159 (336)
Q Consensus 80 ~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~ 159 (336)
|++++.+++.| +..|+++++.+..++|.|+++..+.++..+
T Consensus 100 ~lnVpm~tv~k---------------------------------------n~tii~~ai~E~lf~~~~~~~~v~~Sv~~m 140 (314)
T KOG1444|consen 100 YLNVPMFTVFK---------------------------------------NLTIILTAIGEVLFFGKRPSNKVWASVFAM 140 (314)
T ss_pred ccCchHHHHHh---------------------------------------hchHHHHHHhHHhhcCcCchhhHHHHHHHH
Confidence 99999999999 999999999999999999999999999999
Q ss_pred hhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhc--CCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccch
Q 019786 160 VIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLS 237 (336)
Q Consensus 160 ~~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 237 (336)
.+|......+|.+++..|..+++...++.+.+.++.||..+ +.+.+.+.+|....+.+.+.....+.++.+- .+
T Consensus 141 ~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~----l~ 216 (314)
T KOG1444|consen 141 IIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDA----LS 216 (314)
T ss_pred HHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHH----HH
Confidence 99999999999999999999999999999999999998774 4667889999999999888877777665431 11
Q ss_pred hhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHH-HhCCCCchhhhHHHHHHHHHH
Q 019786 238 DAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIL-AFGNKISTQTGIGTVIAIAGV 316 (336)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~-~fge~~s~~~~~G~~li~~gv 316 (336)
...+......++..+.++|+.++..+++.+++.+..|+++.++++ ++..+...++.+ .+|++.++.+.+|..+-++|.
T Consensus 217 ~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg 295 (314)
T KOG1444|consen 217 LNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG 295 (314)
T ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence 222223334567888999999999999999999999999999999 665555555555 555679999999999999999
Q ss_pred HHhhhhhHHHH
Q 019786 317 AAYSYIKAQME 327 (336)
Q Consensus 317 ~~~~~~~~~~~ 327 (336)
.+|++.+.+++
T Consensus 296 v~Y~~~~~~~k 306 (314)
T KOG1444|consen 296 VLYSYATFRKK 306 (314)
T ss_pred hHHhhhhhhhc
Confidence 99999876543
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.93 E-value=1.8e-23 Score=193.18 Aligned_cols=251 Identities=17% Similarity=0.172 Sum_probs=199.2
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HHHHHHHHhhhhhhhhccccchhhhh
Q 019786 9 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLI-PVAVCHALGHVTSNVSFAAVAVSFTH 87 (336)
Q Consensus 9 ~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~sl~~~~vs~~~ 87 (336)
..+..|..+++..+|..+.++|+..+.+++.+....+ + +++++++.. ..+++..+...+.+.|+++++++.++
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----P-PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----c-CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 4567899988766799999999999988776654432 1 334444444 44555788889999999999999999
Q ss_pred hhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeee
Q 019786 88 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 167 (336)
Q Consensus 88 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~ 167 (336)
++. ++.|+++++++.+++|||++++++.++.++++|+.++.
T Consensus 78 ii~---------------------------------------~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~ 118 (260)
T TIGR00950 78 LLL---------------------------------------YLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL 118 (260)
T ss_pred HHH---------------------------------------hhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence 998 99999999999999999999999999999999999875
Q ss_pred ccc-ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChh--hHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhc
Q 019786 168 LTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDST--NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 244 (336)
Q Consensus 168 ~~~-~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (336)
.++ .+.+..|..++++++++++.+.++.||..++.++. ....+....+.+++.|.....+.+... +
T Consensus 119 ~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~--- 187 (260)
T TIGR00950 119 SDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQA--------L--- 187 (260)
T ss_pred cCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------c---
Confidence 443 45568899999999999999999999998877754 444466788888888876654432110 1
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHH
Q 019786 245 MVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGV 316 (336)
Q Consensus 245 ~~~~~~~l~~~g~~~~~-~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv 316 (336)
...+..+...+.++.. .....+.++++.++.+.+...+++|+++.+++++++||+++..+++|.++++.|+
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 188 -SLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 1223334455555433 3334567899999999999999999999999999999999999999999999886
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.93 E-value=2.4e-23 Score=197.14 Aligned_cols=257 Identities=12% Similarity=0.051 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccc----c
Q 019786 6 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA----V 81 (336)
Q Consensus 6 s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~----~ 81 (336)
........|...+++| |..+.++|+.++.+++.+.. ++++. ++++++..+..++.....+.+.+.++++ .
T Consensus 16 Wg~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~ 89 (295)
T PRK11689 16 WSTMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPRL---RQFPKRYLLAGGLLFVSYEICLALSLGYANTRR 89 (295)
T ss_pred HHHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--ccccc---ccccHHHHHHHhHHHHHHHHHHHHHHHHhhccc
Confidence 4455688999998887 99999999999987766542 22221 2223334444455555666666666654 3
Q ss_pred chhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhh
Q 019786 82 AVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVI 161 (336)
Q Consensus 82 ~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~ 161 (336)
+.....++. ++.|+++++++++++|||++++++.+++++++
T Consensus 90 ~a~~a~~l~---------------------------------------~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~ 130 (295)
T PRK11689 90 QAIEVGMVN---------------------------------------YLWPSLTILFAVLFNGQKANWLLIPGLLLALA 130 (295)
T ss_pred cchHHHHHH---------------------------------------HHhHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 444444555 89999999999999999999999999999999
Q ss_pred hheeeecccc-----------cccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCch
Q 019786 162 GVSMASLTEL-----------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQ 230 (336)
Q Consensus 162 Gv~l~~~~~~-----------~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 230 (336)
|+.++..++. +.+..|.++++.|+++||.++++.||..++.++..... ..+.+.+.+.....+.+.
T Consensus 131 Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~ 207 (295)
T PRK11689 131 GVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPA 207 (295)
T ss_pred hHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCcc
Confidence 9998865432 12356999999999999999999999987888765432 223334434333322111
Q ss_pred hhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHH
Q 019786 231 LIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTV 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~ 310 (336)
..+ + . ..+..+...++.........++++|+.+|.+.+...+++|+++++++++++||+++..+++|++
T Consensus 208 ---~~~----~---~-~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~ 276 (295)
T PRK11689 208 ---MVF----S---L-PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVA 276 (295)
T ss_pred ---ccC----C---H-HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 011 1 1 1223333444444444555678899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh
Q 019786 311 IAIAGVAAYSY 321 (336)
Q Consensus 311 li~~gv~~~~~ 321 (336)
+++.|+.+...
T Consensus 277 lI~~gv~~~~~ 287 (295)
T PRK11689 277 MVTAGSLLCWL 287 (295)
T ss_pred HHHHhHHHHhh
Confidence 99999987654
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.93 E-value=5.1e-23 Score=194.58 Aligned_cols=263 Identities=14% Similarity=0.110 Sum_probs=201.8
Q ss_pred hHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHhhhhhhhhc-cccc
Q 019786 5 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSF-AAVA 82 (336)
Q Consensus 5 ~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sl-~~~~ 82 (336)
......+..|...++.+ |..++++|+.++.+++.+....++++ ..+++++++....|.+. .....+.+.+. ++++
T Consensus 19 iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 95 (292)
T PRK11272 19 IWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVP 95 (292)
T ss_pred HHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 34556778898888777 99999999999987766554433222 22466777777777664 45666777887 8999
Q ss_pred hhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhh
Q 019786 83 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 162 (336)
Q Consensus 83 vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~G 162 (336)
++.++++. ++.|+++++++.+ +|||++++++.+++++++|
T Consensus 96 a~~a~~l~---------------------------------------~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~G 135 (292)
T PRK11272 96 SGIAAVVV---------------------------------------ATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAG 135 (292)
T ss_pred HHHHHHHH---------------------------------------HHHHHHHHHHHHH-hcccCchhHHHHHHHHHHh
Confidence 88888888 9999999999986 6999999999999999999
Q ss_pred heeeecc-cccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhh
Q 019786 163 VSMASLT-ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS 241 (336)
Q Consensus 163 v~l~~~~-~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
+.++..+ +.+.+..|.+++++++++||.+.+..||..++ ++...+.+....+...+.+.....+.+.... +
T Consensus 136 v~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 207 (292)
T PRK11272 136 IVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTAL-------P 207 (292)
T ss_pred HHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCccccc-------C
Confidence 9987644 34556789999999999999999999987543 4556677888888888877765543321100 0
Q ss_pred hhchHHHHHHHHHHHHHHHHHH-HHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 242 KVGMVKFISDLFWVGMFYHLYN-QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 242 ~~~~~~~~~~l~~~g~~~~~~~-~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
+ ...+..+.+.++.+.... ...+.++++.++.+.++..+++|+.+.+++++++||+++..+++|+++++.|+.+.+
T Consensus 208 ~---~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 208 T---LSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred C---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 0 122334445555443333 345678899999999999999999999999999999999999999999999998875
Q ss_pred h
Q 019786 321 Y 321 (336)
Q Consensus 321 ~ 321 (336)
.
T Consensus 285 ~ 285 (292)
T PRK11272 285 L 285 (292)
T ss_pred H
Confidence 4
No 10
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.92 E-value=9.6e-23 Score=193.80 Aligned_cols=272 Identities=19% Similarity=0.297 Sum_probs=220.2
Q ss_pred HHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchh
Q 019786 8 IFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 84 (336)
Q Consensus 8 ~~~i~nK~~~~~--f-~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs 84 (336)
...++++.+.++ . ++|.++++.|+....+...+...... +.+.++..++.+.+.++++.++..++|.|++|++.+
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p 91 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYP 91 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChH
Confidence 344555666543 2 36999999999999887766554333 223345678889999999999999999999999999
Q ss_pred hhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhhe
Q 019786 85 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 164 (336)
Q Consensus 85 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~ 164 (336)
..++.| +..|+++++++.+++|||++++++.++++..+|+.
T Consensus 92 ~~~~~k---------------------------------------s~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~ 132 (303)
T PF08449_consen 92 TQIVFK---------------------------------------SSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVA 132 (303)
T ss_pred HHHHHh---------------------------------------hhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHh
Confidence 999999 99999999999999999999999999999999999
Q ss_pred eeeccccc----c------cHHHHHHHHHHHHHHHHHHHHHhhhhcC--CChhhHHHHHHHHHHHHHHHHHHHhhCchhh
Q 019786 165 MASLTELS----F------NWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLI 232 (336)
Q Consensus 165 l~~~~~~~----~------~~~G~l~~l~s~~~~a~~~v~~k~~~~~--~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 232 (336)
+...+|.+ . +..|+++.+++.++.+...+++||..++ .++.+.++|.+..+.+...+.....+..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~-- 210 (303)
T PF08449_consen 133 IFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGE-- 210 (303)
T ss_pred eeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 98654421 1 1349999999999999999999999864 67889999999999998888777732101
Q ss_pred hccchhhhh-hhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHH
Q 019786 233 KHGLSDAIS-KVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVI 311 (336)
Q Consensus 233 ~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~l 311 (336)
+.+..+ ....+..+..+...++.+...+...+...++.+|++.++...++.+.++++++++||+++++.+|+|.++
T Consensus 211 ---~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~l 287 (303)
T PF08449_consen 211 ---FRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVL 287 (303)
T ss_pred ---hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHH
Confidence 111111 1122335566677777777777777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHH
Q 019786 312 AIAGVAAYSYIKAQ 325 (336)
Q Consensus 312 i~~gv~~~~~~~~~ 325 (336)
+++|..+|.+.|++
T Consensus 288 v~~g~~~~~~~~~k 301 (303)
T PF08449_consen 288 VFAGIFLYSYAKKK 301 (303)
T ss_pred hHHHHHHHHHhhcc
Confidence 99999999987654
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.91 E-value=2.3e-22 Score=190.23 Aligned_cols=254 Identities=13% Similarity=0.078 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhh
Q 019786 7 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 86 (336)
Q Consensus 7 ~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~ 86 (336)
.....+.|+.++++| |..+.++|+.++.+++.+.... ++.+.++++++..+..|++.+....+.+.++++++.+.+
T Consensus 25 ~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a 100 (293)
T PRK10532 25 QSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKP---WRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIA 100 (293)
T ss_pred HhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhH---HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 344557999998887 8889999999998777655422 112345677788888888888888889999999999999
Q ss_pred hhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheee
Q 019786 87 HTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 166 (336)
Q Consensus 87 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~ 166 (336)
+++. .+.|+++++++ +||+++. ..+.++++|+.++
T Consensus 101 ~~l~---------------------------------------~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li 135 (293)
T PRK10532 101 VALE---------------------------------------FTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFL 135 (293)
T ss_pred HHHH---------------------------------------HHHHHHHHHHh----cCChHHH--HHHHHHHHHHhee
Confidence 9988 89999999887 3666544 4456778998876
Q ss_pred ecc---cccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhh
Q 019786 167 SLT---ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKV 243 (336)
Q Consensus 167 ~~~---~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 243 (336)
... ..+.+..|.+++++++++||.+.+..||..++.++... .+....+.+.+.|.....+.+ . .+ +
T Consensus 136 ~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~-~---~~----~-- 204 (293)
T PRK10532 136 LPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE-A---LW----H-- 204 (293)
T ss_pred eecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc-c---cC----C--
Confidence 532 22346789999999999999999999999888887766 455666777777766543321 1 00 0
Q ss_pred chHHHHHHHHHHHHHHHHHHH-HHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 244 GMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 244 ~~~~~~~~l~~~g~~~~~~~~-~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
...+..+++.|+++....+ ..+..+++.+|.+.++..+++|+++.++|++++||+++..+++|.++++.|++.+...
T Consensus 205 --~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 205 --WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 1122233455665544444 3467899999999999999999999999999999999999999999999999998754
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.91 E-value=9.1e-22 Score=186.63 Aligned_cols=266 Identities=15% Similarity=0.233 Sum_probs=188.5
Q ss_pred hHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-Hhhhhhhhhccc-cc
Q 019786 5 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAA-VA 82 (336)
Q Consensus 5 ~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~-~~ 82 (336)
+......+.|..+++++ |..+.++|+.++.+.+.+... +++ . + ++..+..+++.. +...+.+.++++ .+
T Consensus 15 ~Wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~-~--~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 85 (299)
T PRK11453 15 VWGLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK-V--P---LNLLLGYGLTISFGQFAFLFCAINFGMP 85 (299)
T ss_pred HHhhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC-C--c---hHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34556678899888887 999999999987655443321 111 1 2 223444454432 334455667776 56
Q ss_pred hhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhh
Q 019786 83 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 162 (336)
Q Consensus 83 vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~G 162 (336)
.+.+.++. ++.|+++.+++++++|||++++++++++++++|
T Consensus 86 a~~a~~l~---------------------------------------~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~G 126 (299)
T PRK11453 86 AGLASLVL---------------------------------------QAQAFFTIVLGAFTFGERLQGKQLAGIALAIFG 126 (299)
T ss_pred HHHHHHHH---------------------------------------HhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHh
Confidence 77777777 999999999999999999999999999999999
Q ss_pred heeeeccc---ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChh---hHHHHHHHHHHHHHHHHHHHhhCchhhhccc
Q 019786 163 VSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDST---NIYAYISIIALFVCIPPAIIVEGPQLIKHGL 236 (336)
Q Consensus 163 v~l~~~~~---~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~---~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (336)
+.++..++ .+.+..|+++++.++++|+.+.++.||..++.++. ....+....+.+...+.....|++......+
T Consensus 127 v~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (299)
T PRK11453 127 VLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL 206 (299)
T ss_pred HHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh
Confidence 99876432 23356799999999999999999999986654433 3334444444443333333444432111000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHHHHHHHH-HHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHH
Q 019786 237 SDAISKVGMVKFISDLFWVGMFYHLYNQL-ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAG 315 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~g 315 (336)
.... ...+..+++.++++....+. .+..+++.+|.+.+....++|+++.++|++++||+++..+++|.+++++|
T Consensus 207 ----~~~~-~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~g 281 (299)
T PRK11453 207 ----VTID-MTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAG 281 (299)
T ss_pred ----ccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHH
Confidence 1111 13355566666665555554 45788999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhh
Q 019786 316 VAAYSYIK 323 (336)
Q Consensus 316 v~~~~~~~ 323 (336)
+.+..+.+
T Consensus 282 v~l~~~~~ 289 (299)
T PRK11453 282 LYINVFGL 289 (299)
T ss_pred HHHHhcch
Confidence 98876544
No 13
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=3.9e-24 Score=194.43 Aligned_cols=285 Identities=19% Similarity=0.309 Sum_probs=243.5
Q ss_pred eeehHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHHHHHHh--CCC-----CCCCCCHHHHHHHHHHHHHHHHh
Q 019786 2 WYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVSWAV--GLP-----KRAPIDSKLLKLLIPVAVCHALG 70 (336)
Q Consensus 2 w~~~s~~~~i~nK~~~~~----f~~p~~l~~~r~~~~~l~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 70 (336)
+..+|++..+.||++++. .+.|.++++.|.++...++...-.. +.| +..+++.+..+.++|.++.+.++
T Consensus 36 ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~m 115 (347)
T KOG1442|consen 36 YWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILM 115 (347)
T ss_pred eeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeee
Confidence 567899999999999974 6789999999999998877654321 111 12236677889999999999999
Q ss_pred hhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCCh
Q 019786 71 HVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPL 150 (336)
Q Consensus 71 ~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~ 150 (336)
+...|.+++|++++++++-+ ++..+|+.+++++++|||-+.
T Consensus 116 I~fnnlcL~yVgVaFYyvgR---------------------------------------sLttvFtVlLtyvllkqkTs~ 156 (347)
T KOG1442|consen 116 ISFNNLCLKYVGVAFYYVGR---------------------------------------SLTTVFTVLLTYVLLKQKTSF 156 (347)
T ss_pred hhccceehhhcceEEEEecc---------------------------------------chhhhHHHHhHHhhccccccc
Confidence 99999999999999999999 999999999999999999999
Q ss_pred hhHHHHHHHhhhheeeeccc---ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--hhhHHHHHHHHHHHHHHHHHHH
Q 019786 151 TLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAMTDMD--STNIYAYISIIALFVCIPPAII 225 (336)
Q Consensus 151 ~~~~sl~~~~~Gv~l~~~~~---~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~--~~~l~~~~~~~~~~~l~~~~~~ 225 (336)
.-..++.+++.|..+-...| ...++.|.++++.|.++-|+..++.||...+.+ -+.+.+|++..+.+..+|...+
T Consensus 157 ~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~l 236 (347)
T KOG1442|consen 157 FALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLIL 236 (347)
T ss_pred ccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988877 556899999999999999999999998877654 5789999999999999988766
Q ss_pred hhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Q 019786 226 VEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQT 305 (336)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~ 305 (336)
.+.-+-.- .++......+|..+..+|++++.+++...+.++-+||+|+++.+..|.....+++..+++|..+..-
T Consensus 237 nge~~~v~-----~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw 311 (347)
T KOG1442|consen 237 NGEFQAVV-----GFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW 311 (347)
T ss_pred cchHHHHc-----CcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe
Confidence 54322111 1123334578899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHH
Q 019786 306 GIGTVIAIAGVAAYSYIKAQMEEEK 330 (336)
Q Consensus 306 ~~G~~li~~gv~~~~~~~~~~~~~~ 330 (336)
|-|-.+++.|...|++.|..+.+++
T Consensus 312 wtsn~~vLvgs~~YT~vk~~em~~~ 336 (347)
T KOG1442|consen 312 WTSNIVVLVGSLAYTLVKEHEMRKA 336 (347)
T ss_pred eeeeEEEEehhHHHHHHHHHHHHhh
Confidence 9999999999999998876544433
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.90 E-value=1e-21 Score=186.10 Aligned_cols=259 Identities=13% Similarity=0.086 Sum_probs=182.7
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCC-CC--C-CCCHHHHHHHHHHHHHHHHhhhhhhhhccccchh
Q 019786 9 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP-KR--A-PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 84 (336)
Q Consensus 9 ~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs 84 (336)
...+.|.. ++.+ |..+.++|+.++.+.+.+....+++ +. + ..+++++......+++.+....+.+.++++++++
T Consensus 23 ~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 100 (296)
T PRK15430 23 APAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHML 100 (296)
T ss_pred HHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 34556765 4566 9999999999998755544322211 11 0 1133444444555666778899999999999999
Q ss_pred hhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhhe
Q 019786 85 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 164 (336)
Q Consensus 85 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~ 164 (336)
.++++. .+.|+++++++++++|||++++++.+++++++|+.
T Consensus 101 ~a~~l~---------------------------------------~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~ 141 (296)
T PRK15430 101 EASLGY---------------------------------------FINPLVNIVLGMIFLGERFRRMQWLAVILAICGVL 141 (296)
T ss_pred HHHHHH---------------------------------------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999999999
Q ss_pred eeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhcCC--ChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhh
Q 019786 165 MASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISK 242 (336)
Q Consensus 165 l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~--~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 242 (336)
++..++.+.. ..+++++++||.|.++.||..++. +......+..+.+.+...+.. +.+ ... + ..
T Consensus 142 li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~--~----~~ 207 (296)
T PRK15430 142 VQLWTFGSLP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSS-TSH--M----GQ 207 (296)
T ss_pred HHHHHcCCcc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCC-ccc--c----cC
Confidence 8764333222 467889999999999998875432 223334444444444332221 111 000 0 00
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 243 VGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 243 ~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
. ....+..+...|+.+...+...+.++++.+|.+.+...+++|+++.++|++++||+++..+++|++++++|+.+....
T Consensus 208 ~-~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 208 N-PMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred C-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 011122333344444444556678899999999999999999999999999999999999999999999888877654
Q ss_pred h
Q 019786 323 K 323 (336)
Q Consensus 323 ~ 323 (336)
.
T Consensus 287 ~ 287 (296)
T PRK15430 287 A 287 (296)
T ss_pred H
Confidence 3
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.90 E-value=3.7e-22 Score=191.08 Aligned_cols=273 Identities=12% Similarity=0.129 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHh-hCCchHHHHHHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccc
Q 019786 6 NVIFNILNKRIYN-YFPYPYFVSVIHLLVGVVYCLVSWAV--GLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVA 82 (336)
Q Consensus 6 s~~~~i~nK~~~~-~f~~p~~l~~~r~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~ 82 (336)
..+....+..+-+ +.+.|.+-++.....-.+.-...... +.++..+..++++++++..+++...++.+.+.|++|++
T Consensus 25 ~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTs 104 (334)
T PF06027_consen 25 ITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTS 104 (334)
T ss_pred HHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3344445555544 36678877776665544332222222 22222223345667777789999999999999999999
Q ss_pred hhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhh
Q 019786 83 VSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 162 (336)
Q Consensus 83 vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~G 162 (336)
++..+++. .+..+++++++++++|+|+++.++++++++++|
T Consensus 105 vtS~~lL~---------------------------------------~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~G 145 (334)
T PF06027_consen 105 VTSVQLLD---------------------------------------CTSIPFVMILSFIFLKRRYSWFHILGVLICIAG 145 (334)
T ss_pred HhHHHhhh---------------------------------------hhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Confidence 99999999 888889999999999999999999999999999
Q ss_pred heeeeccc---------ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhh
Q 019786 163 VSMASLTE---------LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIK 233 (336)
Q Consensus 163 v~l~~~~~---------~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 233 (336)
+.++...| .+....|+++++.|+++||.++++.|+..++.|..+.+.+....+.++..+...+.|..++.+
T Consensus 146 v~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~ 225 (334)
T PF06027_consen 146 VVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIES 225 (334)
T ss_pred hhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc
Confidence 99876544 124589999999999999999999999999999999999999999999998888888776654
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHH
Q 019786 234 HGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAI 313 (336)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~ 313 (336)
.+|.. ......+..++..+..+...-..++..+|+..++...+..+.++++++++||+++++..++|.++++
T Consensus 226 ~~w~~--------~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIi 297 (334)
T PF06027_consen 226 IHWTS--------QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALII 297 (334)
T ss_pred cCCCh--------hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHH
Confidence 43321 1222223223333333334445689999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHH
Q 019786 314 AGVAAYSYIKAQ 325 (336)
Q Consensus 314 ~gv~~~~~~~~~ 325 (336)
.|.++|+..+.+
T Consensus 298 iG~vvy~~~~~~ 309 (334)
T PF06027_consen 298 IGFVVYNLAESP 309 (334)
T ss_pred HHhheEEccCCc
Confidence 999999875543
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.85 E-value=1e-19 Score=171.02 Aligned_cols=259 Identities=14% Similarity=0.127 Sum_probs=177.8
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhh
Q 019786 8 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 85 (336)
Q Consensus 8 ~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~ 85 (336)
...+.+|...++ ..+ ....+...+.+.+.+....+ .+..++.+++++...+..++.......+.+.++++.+++.
T Consensus 15 ~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 91 (281)
T TIGR03340 15 GWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGL 91 (281)
T ss_pred HHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhh
Confidence 345556655544 223 24556655555554443322 2222233455566666777777888999999999999999
Q ss_pred hhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhhee
Q 019786 86 THTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 165 (336)
Q Consensus 86 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l 165 (336)
...+. .+.|+++++++++++|||++++++.++.+++.|+.+
T Consensus 92 ~~~l~---------------------------------------~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~l 132 (281)
T TIGR03340 92 VYPLA---------------------------------------RSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLV 132 (281)
T ss_pred hhhHH---------------------------------------hhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 99999 899999999999999999999999999999999998
Q ss_pred eeccc-ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHH-HHHHHH---hhCchhhhccchhhh
Q 019786 166 ASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVC-IPPAII---VEGPQLIKHGLSDAI 240 (336)
Q Consensus 166 ~~~~~-~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~---~~~~~~~~~~~~~~~ 240 (336)
+..++ .+.+..|..++++++++|+.|.+..||..++.++..........+.+.. .|.... .++.....
T Consensus 133 l~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 205 (281)
T TIGR03340 133 LGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFP------- 205 (281)
T ss_pred HhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhh-------
Confidence 76433 2345678889999999999999999887655554321111111222221 222221 11110000
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHH
Q 019786 241 SKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 318 (336)
Q Consensus 241 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~ 318 (336)
.. ...+..+...++.....+...+.++++.++...+...+++|+++.++|++++||+++..+++|.++++.|+.+
T Consensus 206 ~~---~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 206 YA---RQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hH---HHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 00 1122223333333444444566789999999999999999999999999999999999999999999999875
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.82 E-value=3.3e-17 Score=152.07 Aligned_cols=259 Identities=19% Similarity=0.212 Sum_probs=187.0
Q ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhc
Q 019786 11 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 90 (336)
Q Consensus 11 i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~ 90 (336)
...|...++...+......|...+..........+..++.+..++.++..+..++.......+.+.++++++++.++.+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 103 (292)
T COG0697 24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII 103 (292)
T ss_pred HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 33444444433356666779888877633333322111222222234566666777788899999999999999999999
Q ss_pred cccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHH-HHhcCcCChhhHHHHHHHhhhheeeecc
Q 019786 91 GEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLT 169 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~-l~l~~~~~~~~~~sl~~~~~Gv~l~~~~ 169 (336)
++.|+++.+++. +++|||++++++.++...+.|+.++...
T Consensus 104 ---------------------------------------~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~ 144 (292)
T COG0697 104 ---------------------------------------GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG 144 (292)
T ss_pred ---------------------------------------HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecC
Confidence 999999999997 7779999999999999999999999876
Q ss_pred cccc---cHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHH-HHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhch
Q 019786 170 ELSF---NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYA-YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGM 245 (336)
Q Consensus 170 ~~~~---~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (336)
+... +..|..+++.++++++.+.+..|+.. +.++..... +..........+. ..+... ... .
T Consensus 145 ~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~----------~ 210 (292)
T COG0697 145 GGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLF--FLSGFG-API----------L 210 (292)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccC----------C
Confidence 6543 36899999999999999999999887 666666665 4433222222222 112111 000 0
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 246 VKFISDLFWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 246 ~~~~~~l~~~g~~~~-~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
...+......|+... ......+...++.++...+....++|+.+.+++++++||+++..+++|+++++.|+...+..
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 122333444455444 34445567889999999999999999999999999999999999999999999999988765
No 18
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.81 E-value=4.7e-18 Score=153.47 Aligned_cols=249 Identities=15% Similarity=0.151 Sum_probs=203.7
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhcc
Q 019786 12 LNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKG 91 (336)
Q Consensus 12 ~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~ 91 (336)
+.|.++.... |.-++.+|..++.+++.+.+ +|.+.+.++++++.+...|++.+..+.+++.|++.++.+....+.
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~---RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE- 104 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALF---RPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE- 104 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHh---hHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh-
Confidence 3455544444 88999999999998877777 355567788999999999999999999999999999999999999
Q ss_pred ccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc-
Q 019786 92 EIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE- 170 (336)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~- 170 (336)
++.|+.++.++ .|| .+...-+.+.+.|..+.....
T Consensus 105 --------------------------------------F~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~ 140 (292)
T COG5006 105 --------------------------------------FTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQ 140 (292)
T ss_pred --------------------------------------hccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccC
Confidence 99999887765 333 445455556777877664433
Q ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHH
Q 019786 171 --LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKF 248 (336)
Q Consensus 171 --~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (336)
.+.|..|..+++.++.||+.|.+..||.-+..+...-....+..++++.+|+...+.++.+.. +..
T Consensus 141 ~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~------------p~l 208 (292)
T COG5006 141 SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFS------------PSL 208 (292)
T ss_pred CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcC------------hHH
Confidence 456899999999999999999999999987888889999999999999999988777665532 233
Q ss_pred HHHHHHHHHHHHHHHHH-HHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 249 ISDLFWVGMFYHLYNQL-ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 249 ~~~l~~~g~~~~~~~~~-~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
+......++++....|+ .+.+++|.++-+++++..+||.++.+.|++++||.+|..||.|++.+++++.-.+.
T Consensus 209 l~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 209 LPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 44445556665555553 57789999999999999999999999999999999999999999999999886554
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.79 E-value=5.4e-17 Score=150.32 Aligned_cols=235 Identities=11% Similarity=0.017 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCC----C-CCCCHH-HHHHHHHHHHHHHHhhhhhhhhc
Q 019786 6 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPK----R-APIDSK-LLKLLIPVAVCHALGHVTSNVSF 78 (336)
Q Consensus 6 s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~-~~~~~~----~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~sl 78 (336)
......+.|. .++.+ |..+.++|++++.+.+.+.. ..++++ + ++.+++ ++......+++.+....+.+.++
T Consensus 14 wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~ 91 (256)
T TIGR00688 14 FGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAV 91 (256)
T ss_pred HHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667887 45566 99999999999987655433 322211 0 111222 34456777877888999999999
Q ss_pred cccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHH
Q 019786 79 AAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAP 158 (336)
Q Consensus 79 ~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~ 158 (336)
++++++.++++. ++.|+++++++++++|||+++++++++++
T Consensus 92 ~~~~~~~a~~l~---------------------------------------~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~ 132 (256)
T TIGR00688 92 NNGSSLEVSLGY---------------------------------------LINPLVMVALGRVFLKERISRFQFIAVII 132 (256)
T ss_pred HcchHHHHHHHH---------------------------------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999
Q ss_pred HhhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchh
Q 019786 159 VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSD 238 (336)
Q Consensus 159 ~~~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (336)
+++|+.++..++.+.+ ..++.++++|+.|.+..||..++ ++.+..... ....+...+.....+.+.... .
T Consensus 133 ~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-- 202 (256)
T TIGR00688 133 ATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT-DLAGFCLET-LSLMPVAIYYLLQTDFATVQQ--T-- 202 (256)
T ss_pred HHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC-CcchHHHHH-HHHHHHHHHHHHHhccCcccc--c--
Confidence 9999997754332222 35788999999999999887543 333322211 111111211111112111000 0
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHH
Q 019786 239 AISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA 296 (336)
Q Consensus 239 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~ 296 (336)
+ ....|..++..|+.+...+.....++++.+|.+.++..+++|+++.+++.+.
T Consensus 203 --~---~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 203 --N---PFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred --C---chhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0112333444455544555566788999999999999999999999999764
No 20
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.78 E-value=5.5e-18 Score=150.48 Aligned_cols=275 Identities=16% Similarity=0.199 Sum_probs=229.5
Q ss_pred eeehHHHHHHHHHHHHhh--CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019786 2 WYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA 79 (336)
Q Consensus 2 w~~~s~~~~i~nK~~~~~--f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~ 79 (336)
|+..|+..++-||+++++ |+.-+.+.+.|.+++.+-+....+.|..+. +..+.|.++|++++....+....-+++
T Consensus 14 Yc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKsLq 90 (309)
T COG5070 14 YCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKSLQ 90 (309)
T ss_pred HHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhccccee
Confidence 467789999999999975 776778889998888776555554433321 244577889999999999999999999
Q ss_pred ccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHH
Q 019786 80 AVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPV 159 (336)
Q Consensus 80 ~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~ 159 (336)
|.+++.+++-| ++..+.++..+.+++|.|.+.....+.+++
T Consensus 91 yL~vpiYTiFK---------------------------------------NltII~iAygEvl~Fgg~vtsl~l~SFilM 131 (309)
T COG5070 91 YLAVPIYTIFK---------------------------------------NLTIILIAYGEVLFFGGRVTSLELLSFILM 131 (309)
T ss_pred eeeeeHHHHhc---------------------------------------cceeehhHhhHHHHhcCccchhhHHHHHHH
Confidence 99999999999 999999999999999999999999999999
Q ss_pred hhhheeeeccccc--------ccHHHHHHHHHHHHHHHHHHHHHhhhhc--CCChhhHHHHHHHHHHHHHHHHHHHhhCc
Q 019786 160 VIGVSMASLTELS--------FNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGP 229 (336)
Q Consensus 160 ~~Gv~l~~~~~~~--------~~~~G~l~~l~s~~~~a~~~v~~k~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 229 (336)
++.-....++|.+ .| .|.++.....+..+.+-+..||..+ +....+.++|....+.++++......|++
T Consensus 132 vlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edw 210 (309)
T COG5070 132 VLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDW 210 (309)
T ss_pred HHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccC
Confidence 9999998888752 33 5888999999999999888876653 45678899999999999999999988865
Q ss_pred hhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHH
Q 019786 230 QLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGT 309 (336)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~ 309 (336)
+.. ....+.+ ...+..++.+|+.++...++.-++++-++..+.|+.+.+......+.|.++|||+.+...+..+
T Consensus 211 s~~--n~annl~----~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~si 284 (309)
T COG5070 211 SPG--NLANNLS----VDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSI 284 (309)
T ss_pred Ccc--hhhcCCC----hHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHH
Confidence 332 1111111 2335677899999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHH
Q 019786 310 VIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 310 ~li~~gv~~~~~~~~~ 325 (336)
.+-+.+-.+|.+.+.+
T Consensus 285 llGflsg~iYavaks~ 300 (309)
T COG5070 285 LLGFLSGAIYAVAKSK 300 (309)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987654
No 21
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.71 E-value=4.5e-15 Score=140.52 Aligned_cols=251 Identities=19% Similarity=0.208 Sum_probs=180.6
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhh
Q 019786 9 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 87 (336)
Q Consensus 9 ~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~ 87 (336)
.....|... +.+.++.+ |..++.++.... ...+.++ +..++.+..-+..|++.+.++.+...+.++++++.+.
T Consensus 16 ~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~ 89 (290)
T TIGR00776 16 FVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTM 89 (290)
T ss_pred hHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHh
Confidence 344455544 44433332 677776654432 2223222 2235566667777888889999999999999999998
Q ss_pred hhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcc-hhhHHHHHHHHHHhcCcCChhh----HHHHHHHhhh
Q 019786 88 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIG 162 (336)
Q Consensus 88 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pi~~~~~~~l~l~~~~~~~~----~~sl~~~~~G 162 (336)
.+. . +.|+++.+.+.+++|||.++++ +.++++.++|
T Consensus 90 ~i~---------------------------------------~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G 130 (290)
T TIGR00776 90 PIS---------------------------------------TGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIG 130 (290)
T ss_pred HHH---------------------------------------HHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh
Confidence 877 4 7788999999999999999999 9999999999
Q ss_pred heeeeccccc-------cc-HHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHH---HHHHHHHHHHHHHHHHHhhCchh
Q 019786 163 VSMASLTELS-------FN-WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIY---AYISIIALFVCIPPAIIVEGPQL 231 (336)
Q Consensus 163 v~l~~~~~~~-------~~-~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~---~~~~~~~~~~l~~~~~~~~~~~~ 231 (336)
+.+....+.+ .+ ..|.+++++|+++|+.|.+..|+. +.||.+.. .+....++.+..+.. ....|
T Consensus 131 ~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~-- 205 (290)
T TIGR00776 131 VYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP-- 205 (290)
T ss_pred HheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH-hcccc--
Confidence 9988653221 33 789999999999999999999976 47888774 443444444333322 10111
Q ss_pred hhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhh-ccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhh----
Q 019786 232 IKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTG---- 306 (336)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~-~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~---- 306 (336)
+ .. ...+. .+..|++....+...+...+ +.++.+.+++...+|+.+.+++++++||+.+..|+
T Consensus 206 ----~----~~---~~~~~-~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~ 273 (290)
T TIGR00776 206 ----L----KK---YAILL-NILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAIS 273 (290)
T ss_pred ----h----HH---HHHHH-HHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhH
Confidence 0 00 11222 22366664444445557778 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 019786 307 IGTVIAIAGVAAYSY 321 (336)
Q Consensus 307 ~G~~li~~gv~~~~~ 321 (336)
+|.++++.|+.+...
T Consensus 274 iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 274 VGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987654
No 22
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.69 E-value=8.5e-16 Score=130.92 Aligned_cols=145 Identities=32% Similarity=0.465 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcC-------CChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhc-hHHH
Q 019786 177 GFISAMISNISFTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKF 248 (336)
Q Consensus 177 G~l~~l~s~~~~a~~~v~~k~~~~~-------~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 248 (336)
|+++++.|+++.++++++.|+.+++ .++.++..|..+.+.+.++|.+...|+++..+........+.. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999987754 5799999999999999999999999988754322111110111 3356
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 249 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
+..++..|+.++++|...+..++++||+++++.+.+|++..+++|+++|||++|..+++|+++.+.|..+|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999985
No 23
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.69 E-value=4.7e-15 Score=137.35 Aligned_cols=258 Identities=14% Similarity=0.119 Sum_probs=211.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhcccccccccc
Q 019786 20 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQ 99 (336)
Q Consensus 20 f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~ 99 (336)
|..|.++.+.|-+++.+....+... +++ ....++.++.+-..++...++..+...|++|++-+..+..|
T Consensus 48 F~~~~fL~~~q~l~~~~~s~~~l~~-~k~-~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaK--------- 116 (327)
T KOG1581|consen 48 FEHSLFLVFCQRLVALLVSYAMLKW-WKK-ELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAK--------- 116 (327)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhc-ccc-cCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHH---------
Confidence 7779999999998887766444332 222 23355678889999999999999999999999999999999
Q ss_pred CchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc---------
Q 019786 100 GENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--------- 170 (336)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~--------- 170 (336)
++.-+-+++++.++.|+|.+..+.+..+++..|+.+....+
T Consensus 117 ------------------------------scKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g 166 (327)
T KOG1581|consen 117 ------------------------------SCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSG 166 (327)
T ss_pred ------------------------------HhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccC
Confidence 88888899999999999999999999999999999875432
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhhhhc--CCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhh-hhchHH
Q 019786 171 LSFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS-KVGMVK 247 (336)
Q Consensus 171 ~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 247 (336)
.++++.|+.+....-..-++.+..++++.+ ++++.+++++.+....+......+..+. +.+.++ ...++.
T Consensus 167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-------~~~av~F~~~hp~ 239 (327)
T KOG1581|consen 167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-------LLPAVSFIKEHPD 239 (327)
T ss_pred CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-------CchHHHHHHcChh
Confidence 124689999999999999999999998886 4789999999999999888766332221 111111 122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHH
Q 019786 248 FISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 248 ~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~ 325 (336)
.+.+++..+..+...+...+..+++.+|++......++..+.+.++.+.||++++..|+.|..+++.|+.+-.+.+.+
T Consensus 240 ~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 240 VAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 667777778888778888888999999999999999999999999999999999999999999999999887766655
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.67 E-value=8.7e-16 Score=137.53 Aligned_cols=255 Identities=16% Similarity=0.169 Sum_probs=204.0
Q ss_pred hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccc
Q 019786 19 YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYAD 98 (336)
Q Consensus 19 ~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~ 98 (336)
+|.+...+.+.|...-.++.-+... .+++.+.++..-+.+...++-+.+.++..|.++++++-+....-|
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgK-------- 118 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGK-------- 118 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcc--------
Confidence 4778888999998888777654443 344455666667788899999999999999999999999999999
Q ss_pred cCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc-------c
Q 019786 99 QGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-------L 171 (336)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~-------~ 171 (336)
+..|+-+++++.++.+++.+|++...+.+++.|+++....+ .
T Consensus 119 -------------------------------ScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~ 167 (337)
T KOG1580|consen 119 -------------------------------SCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAED 167 (337)
T ss_pred -------------------------------cCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcc
Confidence 99999999999999999999999999999999999876543 1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhhcC--CChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHH
Q 019786 172 SFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFI 249 (336)
Q Consensus 172 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~--~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (336)
+....|-++.++|...-......+.|.... -+...++.+++..+.+.+-.-.++ .++-+ + +. .-....+..+
T Consensus 168 ~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lf-TGElw-e--F~--yF~~RhP~~~ 241 (337)
T KOG1580|consen 168 KTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLF-TGELW-E--FF--YFVQRHPYVF 241 (337)
T ss_pred cccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhhee-hhhHH-H--HH--HHHHhccHHH
Confidence 223678899999988888888888776543 456789999999998877654333 33211 0 11 1122233456
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 250 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 250 ~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
..+...++.+.+.+...|+.+...+|++-|+....+..+++++++++|+++++..||+|.++++.|...-.
T Consensus 242 ~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 242 WDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 66777777777777778899999999999999999999999999999999999999999999999987643
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.66 E-value=1.2e-14 Score=134.21 Aligned_cols=213 Identities=16% Similarity=0.183 Sum_probs=169.2
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchh
Q 019786 53 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALE 132 (336)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (336)
++++..++..+++++..++.+.+.++++++.+.+++++ ++.
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~---------------------------------------q~k 53 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLS---------------------------------------QSK 53 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH---------------------------------------hhH
Confidence 34567778889999999999999999999999999999 999
Q ss_pred hHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeecccc-----------------cccHHHHHHHHHHHHHHHHHHHHH
Q 019786 133 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------------SFNWTGFISAMISNISFTYRSIYS 195 (336)
Q Consensus 133 Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~~-----------------~~~~~G~l~~l~s~~~~a~~~v~~ 195 (336)
.+++++++++++|||++++||.++.+.+.|+.+...++. +....|.++.++++++.++..++.
T Consensus 54 Il~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~ 133 (244)
T PF04142_consen 54 ILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYF 133 (244)
T ss_pred HHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998843221 123689999999999999999999
Q ss_pred hhhhcCC--ChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 019786 196 KKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERV 273 (336)
Q Consensus 196 k~~~~~~--~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~ 273 (336)
+|.+|+- +.+..+...+..+.++.++.....|+....+.++.+.++. ..|..++..++.+..... .+|+.
T Consensus 134 E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~----~~~~~i~~~a~gGllva~----v~Kya 205 (244)
T PF04142_consen 134 EKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSW----WVWIVIFLQAIGGLLVAF----VLKYA 205 (244)
T ss_pred HHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcch----HHHHHHHHHHHhhHHHHH----HHHHH
Confidence 9999764 4555666667777777766655556655555554433221 234444444444444332 46999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHH
Q 019786 274 APLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 312 (336)
Q Consensus 274 s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li 312 (336)
+.+.-+....+..+++.+.++.+||.++|....+|..++
T Consensus 206 dnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 206 DNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 999999999999999999999999999999999998753
No 26
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.63 E-value=1.2e-16 Score=145.33 Aligned_cols=266 Identities=16% Similarity=0.097 Sum_probs=198.7
Q ss_pred hHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchh
Q 019786 5 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 84 (336)
Q Consensus 5 ~s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs 84 (336)
.|....+..|-+. + .|....-.|+.+-.+...++....+.. .--++...+.+++.|+....+..+.++|+.|++.+
T Consensus 49 f~~~~vv~t~~~e--~-~p~e~a~~r~l~~mlit~pcliy~~~~-v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~msla 124 (346)
T KOG4510|consen 49 FNSCMVVSTKVLE--N-DPMELASFRLLVRMLITYPCLIYYMQP-VIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLA 124 (346)
T ss_pred HhhHHHhhhhhhc--c-ChhHhhhhhhhhehhhhheEEEEEeee-eecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchh
Confidence 3444444444432 2 378888888666666555544322111 10112234456778888888888999999999999
Q ss_pred hhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhhe
Q 019786 85 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 164 (336)
Q Consensus 85 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~ 164 (336)
.++++. ++.|.++.++++.++|||.|+.+.++..+.+.||+
T Consensus 125 DA~vIt---------------------------------------FssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVV 165 (346)
T KOG4510|consen 125 DAVVIT---------------------------------------FSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVV 165 (346)
T ss_pred heEEEE---------------------------------------ecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEE
Confidence 999999 99999999999999999999999999999999999
Q ss_pred eeeccc--------------ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCch
Q 019786 165 MASLTE--------------LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQ 230 (336)
Q Consensus 165 l~~~~~--------------~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 230 (336)
++...+ .+.+..|...++.+++.-|--.++.|+.-++.|..-...|...++.+..+.........+
T Consensus 166 LIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~ 245 (346)
T KOG4510|consen 166 LIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQ 245 (346)
T ss_pred EEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcccee
Confidence 985421 123467888888888888888888888888888777777777777666554433333222
Q ss_pred hhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHH
Q 019786 231 LIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTV 310 (336)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~ 310 (336)
+ +|.+. -+..++..|++++..+....+.+|+-.+...+++.+..-+++.++.+++|||-||+.+|.|++
T Consensus 246 l-P~cgk----------dr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~ 314 (346)
T KOG4510|consen 246 L-PHCGK----------DRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAV 314 (346)
T ss_pred c-Ccccc----------ceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhcee
Confidence 2 11111 123345668889988888888889888888999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhH
Q 019786 311 IAIAGVAAYSYIKA 324 (336)
Q Consensus 311 li~~gv~~~~~~~~ 324 (336)
+++.+.++....|.
T Consensus 315 ~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 315 MVVSSTVWVALKKW 328 (346)
T ss_pred eeehhHHHHHHHHH
Confidence 99999988776654
No 27
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.60 E-value=1.3e-12 Score=121.07 Aligned_cols=262 Identities=13% Similarity=0.128 Sum_probs=180.8
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCCCCC-C--CCCHHHHHHHHHHHHHHHHhhhhhhhhccccchh
Q 019786 9 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKR-A--PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 84 (336)
Q Consensus 9 ~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~-~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs 84 (336)
..++.|.+ ++.| +..+...|..-+..++..... .|..+. . ..+++.+......++..+.+...+.+|...-.+-
T Consensus 22 lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~l 99 (293)
T COG2962 22 LPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVL 99 (293)
T ss_pred HHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchh
Confidence 34445544 2344 789999999988876654332 221111 1 1123345555555665565556666655554444
Q ss_pred hhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhhe
Q 019786 85 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 164 (336)
Q Consensus 85 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~ 164 (336)
.++.-. ..+|+++.+++.+++|||+++.|+++++++.+||.
T Consensus 100 eaSLGY---------------------------------------~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~ 140 (293)
T COG2962 100 EASLGY---------------------------------------FINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVL 140 (293)
T ss_pred HHHhHH---------------------------------------HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 444444 77899999999999999999999999999999999
Q ss_pred eeecccccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhc
Q 019786 165 MASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 244 (336)
Q Consensus 165 l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (336)
.-.....++++... .=+++|+.|...-|+. ++|+.+-.+.-...-.+..+......+.++.. ...+
T Consensus 141 ~~~~~~g~lpwval----~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~--------~~~~ 206 (293)
T COG2962 141 IQTWLLGSLPWVAL----ALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQF--------LQQN 206 (293)
T ss_pred HHHHHcCCCcHHHH----HHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchh--------hhcC
Confidence 98888888888655 4456799999986654 67777666665555555555554444433210 0111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhH
Q 019786 245 MVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 324 (336)
Q Consensus 245 ~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~ 324 (336)
....+..++..|.....--.....+-++.+-.+.+++.+.+|.....++++++||+++..+....+.+-.|..+|.....
T Consensus 207 ~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 207 ANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred CchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12334556666665543333334567899999999999999999999999999999999999999999999999987655
Q ss_pred H
Q 019786 325 Q 325 (336)
Q Consensus 325 ~ 325 (336)
+
T Consensus 287 ~ 287 (293)
T COG2962 287 Y 287 (293)
T ss_pred H
Confidence 4
No 28
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.58 E-value=2.3e-14 Score=136.09 Aligned_cols=222 Identities=18% Similarity=0.249 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHH
Q 019786 57 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFN 136 (336)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~ 136 (336)
.+.-+..+.+....+.+.|.|+++++++-.+++. ++.-+|+
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilS---------------------------------------StSs~Ft 199 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILS---------------------------------------STSSFFT 199 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh---------------------------------------hcchHHH
Confidence 3444555555678899999999999999999999 9999999
Q ss_pred HHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc--------ccccHHHHHHHHHHHHHHHHHHHHHhhhhcC----CCh
Q 019786 137 AAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--------LSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDS 204 (336)
Q Consensus 137 ~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~--------~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~----~~~ 204 (336)
.+++.++.+||+|+.+.+++.+.+.|++++..+| .+....|.+++++|++.||.|.++.||...+ +|.
T Consensus 200 L~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi 279 (416)
T KOG2765|consen 200 LFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDI 279 (416)
T ss_pred HHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccH
Confidence 9999999999999999999999999999998763 2345899999999999999999999988754 456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHH-HHHHHHHHHHHhHhhccChhHHHHHHH
Q 019786 205 TNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG-MFYHLYNQLATNTLERVAPLTHAVGNV 283 (336)
Q Consensus 205 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~l~~~s~~~~si~~~ 283 (336)
.....+...+..+.+.|...+.+....-+.+... ..++ ..++..+ +..++..++..++.-.++|++..+...
T Consensus 280 ~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~------~~q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmS 352 (416)
T KOG2765|consen 280 QLFFGFVGLFNLLLLWPPLIILDFFGEERFELPS------STQF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMS 352 (416)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCC------Ccee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeee
Confidence 6677788888888888888877643221211111 1111 2223333 445677777788889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhH
Q 019786 284 LKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 324 (336)
Q Consensus 284 l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~ 324 (336)
+..+++.+...++=|.++|+.+++|.+.++.|.+..++..+
T Consensus 353 ltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 353 LTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred EeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 99999999999999999999999999999999999887654
No 29
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.6e-12 Score=123.34 Aligned_cols=225 Identities=13% Similarity=0.159 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhH
Q 019786 55 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPF 134 (336)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi 134 (336)
++......+++++++++.+.+.++.+.+.+.+++.. .+..+
T Consensus 90 ~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~---------------------------------------qlKI~ 130 (345)
T KOG2234|consen 90 RETLKVSVPALIYALQNNLQYVALSNLDAATYQVTY---------------------------------------QLKIL 130 (345)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhh---------------------------------------hHHHH
Confidence 345667788889999999999999999999999999 99999
Q ss_pred HHHHHHHHHhcCcCChhhHHHHHHHhhhheeeecc---c--------ccccHHHHHHHHHHHHHHHHHHHHHhhhhcC--
Q 019786 135 FNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---E--------LSFNWTGFISAMISNISFTYRSIYSKKAMTD-- 201 (336)
Q Consensus 135 ~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~---~--------~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~-- 201 (336)
.++++..++++||++++||.++++.++|+.+...+ + .+..+.|....+.+..+.++..++.+|.+++
T Consensus 131 tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~ 210 (345)
T KOG2234|consen 131 TTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN 210 (345)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999988621 1 2235899999999999999999999999964
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHH
Q 019786 202 MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVG 281 (336)
Q Consensus 202 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~ 281 (336)
.+.+.-+...+..+.++.+......|+......++.. ... ...|..++..+..+.+.... .++.+...-...
T Consensus 211 ~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~---G~s-~~vw~vVl~~a~gGLlvs~v----~KyADnIlK~f~ 282 (345)
T KOG2234|consen 211 VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFY---GYS-SIVWLVVLLNAVGGLLVSLV----MKYADNILKGFS 282 (345)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhccccccccCCccc---ccc-HHHHHHHHHHhccchhHHHH----HHHhHHHHHHHH
Confidence 5556666666777777777766666665553222222 111 23455555555555555443 588888888888
Q ss_pred HHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHHH
Q 019786 282 NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 326 (336)
Q Consensus 282 ~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~~ 326 (336)
..+..+++.+.++.+||.+||....+|..+++.++.+|+..+.+.
T Consensus 283 ~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 283 TSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 889999999999999999999999999999999999999666554
No 30
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.45 E-value=4.6e-13 Score=122.63 Aligned_cols=267 Identities=13% Similarity=0.151 Sum_probs=196.0
Q ss_pred HHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhcc-ccchhhhhhhc
Q 019786 13 NKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA-AVAVSFTHTIK 90 (336)
Q Consensus 13 nK~~~~~f~-~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~~~vs~~~~i~ 90 (336)
-+.+.++.| ....+++.|+++-..--++..-.-...+.++ ..|.+...-..+...++++|.+++ .++++...+.+
T Consensus 22 lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~ki---plk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfR 98 (330)
T KOG1583|consen 22 LELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKI---PLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFR 98 (330)
T ss_pred HHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCC---chhhhheehheeeeeeeeccceeeecccceEEEEEe
Confidence 344444555 4568999998887664444331111111223 355566666667778899999998 57888888888
Q ss_pred cccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeec--
Q 019786 91 GEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-- 168 (336)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~-- 168 (336)
+-.++.+++++++++|+|.+.+|+.|+.+..+|+.+...
T Consensus 99 ---------------------------------------sgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s 139 (330)
T KOG1583|consen 99 ---------------------------------------SGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFS 139 (330)
T ss_pred ---------------------------------------cCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeec
Confidence 889999999999999999999999999999999998742
Q ss_pred -cccc--------------c--cHHHHHHHHHHHHHHHHHHHHHhhhhcCC--ChhhHHHHHHHHHHHHHHHHHHHhhCc
Q 019786 169 -TELS--------------F--NWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGP 229 (336)
Q Consensus 169 -~~~~--------------~--~~~G~l~~l~s~~~~a~~~v~~k~~~~~~--~~~~l~~~~~~~~~~~l~~~~~~~~~~ 229 (336)
.|.. + -..|+.+..++.+..|...+++++..+|. ++-+.++|....+.+..+.. ..
T Consensus 140 ~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~----~~- 214 (330)
T KOG1583|consen 140 SKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM----GD- 214 (330)
T ss_pred CcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh----cc-
Confidence 1110 1 15788888899999999999998888764 67789999988766544332 22
Q ss_pred hhhhccchhhhhh---------hchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCC
Q 019786 230 QLIKHGLSDAISK---------VGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNK 300 (336)
Q Consensus 230 ~~~~~~~~~~~~~---------~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~ 300 (336)
++.+ .|...... ...+..|..++..++..+.+.-..+..-.+++++|.++.-.++..+.++++.+.|+++
T Consensus 215 div~-~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Np 293 (330)
T KOG1583|consen 215 DIVS-HWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENP 293 (330)
T ss_pred hHHH-HHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCC
Confidence 2211 12111111 1123456677788888777766677788999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHhhhhhHHHH
Q 019786 301 ISTQTGIGTVIAIAGVAAYSYIKAQME 327 (336)
Q Consensus 301 ~s~~~~~G~~li~~gv~~~~~~~~~~~ 327 (336)
+|+..|+|.++++.|..+|....++.+
T Consensus 294 ft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 294 FTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 999999999999999999986555443
No 31
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.5e-12 Score=118.97 Aligned_cols=255 Identities=16% Similarity=0.163 Sum_probs=203.6
Q ss_pred CC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccc
Q 019786 20 FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYAD 98 (336)
Q Consensus 20 f~-~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~ 98 (336)
|+ +.|.++..|+++=..+.++-...-..+++ ...||.+..++.+..+.+.+.|.|+.|.+-+.-.+-|
T Consensus 71 fkp~GWylTlvQf~~Ysg~glie~~~~~~k~r---~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFK-------- 139 (367)
T KOG1582|consen 71 FKPFGWYLTLVQFLVYSGFGLIELQLIQTKRR---VIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFK-------- 139 (367)
T ss_pred CcccchHHHHHHHHHHHhhhheEEEeecccce---ecchhHhhhhHhhhhhccccCcCccccccCcHHHHHH--------
Confidence 65 88999999987754433322111112222 2458889999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc----cccc
Q 019786 99 QGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFN 174 (336)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~----~~~~ 174 (336)
.+.-+-+++.+.++-|+|.++..+.+..++.+|.++....| +++|
T Consensus 140 -------------------------------ccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~ 188 (367)
T KOG1582|consen 140 -------------------------------CCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFN 188 (367)
T ss_pred -------------------------------hhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcc
Confidence 88888889999999999999999999999999999876544 6789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcC--CChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhh--hhchHHHHH
Q 019786 175 WTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS--KVGMVKFIS 250 (336)
Q Consensus 175 ~~G~l~~l~s~~~~a~~~v~~k~~~~~--~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 250 (336)
..|....-.+-++-|+-.-.++|.++. -++.++.+|...++.+.++.+....++ ....+. ..++.....
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge-------~f~a~~fcaehp~~tyG 261 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE-------LFSAWTFCAEHPVRTYG 261 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc-------chhhhHHHHhCcHhHHH
Confidence 999999999999999998889988864 456788899999999888777655432 111111 123344566
Q ss_pred HHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhh
Q 019786 251 DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 323 (336)
Q Consensus 251 ~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~ 323 (336)
..++.++.+++........++..++.+.......+...++++++++|.+++|.+..-|..+++.|+.+..+.|
T Consensus 262 y~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 262 YAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 6677777777777777778899999999999999999999999999999999999999999999999866554
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.37 E-value=4.3e-11 Score=110.06 Aligned_cols=224 Identities=17% Similarity=0.229 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHH
Q 019786 58 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNA 137 (336)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~ 137 (336)
+..++.++|-..+..+.+.++.+++.+.+|+++ +...+|+.
T Consensus 87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlR---------------------------------------GaviIFvg 127 (372)
T KOG3912|consen 87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLR---------------------------------------GAVIIFVG 127 (372)
T ss_pred ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhh---------------------------------------cchhhhhH
Confidence 456679999999999999999999999999999 88899999
Q ss_pred HHHHHHhcCcCChhhHHHHHHHhhhheeeeccc----------ccccHHHHHHHHHHHHHHHHHHHHHhhhhcC--CChh
Q 019786 138 AASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----------LSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDST 205 (336)
Q Consensus 138 ~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~----------~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~--~~~~ 205 (336)
+++--+++++++.++|+++.....|++++...| .+.-..|.++.+.+-+.-|...++.+|..++ ++|.
T Consensus 128 lfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl 207 (372)
T KOG3912|consen 128 LFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPL 207 (372)
T ss_pred HHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHH
Confidence 999999999999999999999999999885443 2234789999999999999999999988864 7899
Q ss_pred hHHHHHHHHHHHHHHHHHHH----hhCc--hhhhc----cchhhhhhhchHHHHHHHHHHHH--HHHHHHHHHHhHhhcc
Q 019786 206 NIYAYISIIALFVCIPPAII----VEGP--QLIKH----GLSDAISKVGMVKFISDLFWVGM--FYHLYNQLATNTLERV 273 (336)
Q Consensus 206 ~l~~~~~~~~~~~l~~~~~~----~~~~--~~~~~----~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~l~~~ 273 (336)
+...|...++.+++..++.. ..+. ....+ +|.+.+...+-...+. +...|. --..+|.......+..
T Consensus 208 ~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~-val~~~~vSiAffNfaGlsitk~~ 286 (372)
T KOG3912|consen 208 QAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLA-VALIGFTVSIAFFNFAGLSITKEL 286 (372)
T ss_pred HHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhH-HHHhhhhhheeeeeehhhHHHHHh
Confidence 99999888885544333322 2221 11111 2333333222111111 111121 1224455555667888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 274 APLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 274 s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
|+.+-.++..++....-+++.....|..+..|+.|.++.+.|+++|+-
T Consensus 287 SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 287 SATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred hHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999973
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.16 E-value=1.7e-11 Score=111.40 Aligned_cols=266 Identities=9% Similarity=0.056 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchh
Q 019786 6 NVIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 84 (336)
Q Consensus 6 s~~~~i~nK~~~~~-f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs 84 (336)
..+..+.+.++-.+ .+-|..-+++....-.+.-.+....|+ +.-+..|+.+++.++.-.=++.+-..|++|++..
T Consensus 30 ~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmt 105 (336)
T KOG2766|consen 30 ITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMT 105 (336)
T ss_pred HHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchH
Confidence 33444555555544 556776666655443332222222222 2223457778888887766777778899999988
Q ss_pred hhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhhe
Q 019786 85 FTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 164 (336)
Q Consensus 85 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~ 164 (336)
..+.+. .-...-+.+++++++|.|..+.++.++++++.|+.
T Consensus 106 Si~lLD---------------------------------------cwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvv 146 (336)
T KOG2766|consen 106 SIMLLD---------------------------------------CWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVV 146 (336)
T ss_pred HHHHHH---------------------------------------HhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceE
Confidence 777777 44444589999999999999999999999999999
Q ss_pred eeeccc--------ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccc
Q 019786 165 MASLTE--------LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGL 236 (336)
Q Consensus 165 l~~~~~--------~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (336)
++...| .+....|..+.+.++-+||..++..+.+.++.|-.+++.....+++++..+= .+.|......-.|
T Consensus 147 mvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w 225 (336)
T KOG2766|consen 147 MVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHW 225 (336)
T ss_pred EEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEee
Confidence 986554 3456899999999999999999999999999999999999988888877654 4445433322112
Q ss_pred hhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHH
Q 019786 237 SDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGV 316 (336)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv 316 (336)
. .-....+...+..++..-..-..+|..++...++.-......++++ ..||-+.++.-.+..+.+..|.
T Consensus 226 ~---------~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~Gl 294 (336)
T KOG2766|consen 226 D---------SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGL 294 (336)
T ss_pred h---------HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhh
Confidence 1 1111111122223333334445678889988899888999999888 7788889999999999999999
Q ss_pred HHhhhhhHHH
Q 019786 317 AAYSYIKAQM 326 (336)
Q Consensus 317 ~~~~~~~~~~ 326 (336)
++|..+++.+
T Consensus 295 iiYs~re~~~ 304 (336)
T KOG2766|consen 295 IIYSTREKDE 304 (336)
T ss_pred EEeeccccCc
Confidence 9997654443
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.10 E-value=3.6e-10 Score=91.80 Aligned_cols=120 Identities=16% Similarity=0.301 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHH-HHHhhhhhhhhccccch
Q 019786 6 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAV 83 (336)
Q Consensus 6 s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~~~v 83 (336)
......++|...++.| |....++|+..+.+ +.+.. ..+.++..+.+++++......+.+ ..++..+.+.++++.++
T Consensus 3 ~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 80 (126)
T PF00892_consen 3 WAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISA 80 (126)
T ss_pred eeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcch
Confidence 3456788999998877 89999999999986 44332 222222345566677777777777 58899999999999999
Q ss_pred hhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhh
Q 019786 84 SFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 163 (336)
Q Consensus 84 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv 163 (336)
+..+.+. .++|+++.+++++++||+++++++.++.+++.|+
T Consensus 81 ~~~~~~~---------------------------------------~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~ 121 (126)
T PF00892_consen 81 SIVSILQ---------------------------------------YLSPVFAAILGWLFLGERPSWRQIIGIILIIIGV 121 (126)
T ss_pred hHHHHHH---------------------------------------HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999998
Q ss_pred eee
Q 019786 164 SMA 166 (336)
Q Consensus 164 ~l~ 166 (336)
.++
T Consensus 122 ~l~ 124 (126)
T PF00892_consen 122 VLI 124 (126)
T ss_pred HHH
Confidence 764
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.04 E-value=2e-09 Score=87.31 Aligned_cols=124 Identities=22% Similarity=0.259 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHH-HHHHHH
Q 019786 186 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF-YHLYNQ 264 (336)
Q Consensus 186 ~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~ 264 (336)
++|+.+.++.|+..++.|+.....+....+.+ +++.....+..+..+ .+. ..+......+.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKN------LSP----RQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccC------CCh----hhhhhhhHhhccceehHHH
Confidence 36888999999999999999999999999998 766666655432111 011 112233444444 344555
Q ss_pred HHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 265 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 265 ~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
..+.++++.++...+....++|+++.++++++++|+++..+++|+++++.|+.+..
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999998754
No 36
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.04 E-value=1.3e-09 Score=98.90 Aligned_cols=179 Identities=15% Similarity=0.098 Sum_probs=112.4
Q ss_pred chhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheee--------------------ecccc-------cccHHHHHHHH
Q 019786 130 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA--------------------SLTEL-------SFNWTGFISAM 182 (336)
Q Consensus 130 ~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~--------------------~~~~~-------~~~~~G~l~~l 182 (336)
+..|+++++.++...+||.+..++++.++...|+... ..++. ...+.|....+
T Consensus 12 s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~~g~~~~l 91 (222)
T TIGR00803 12 QNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVVGLSAVL 91 (222)
T ss_pred hcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHHHHHHHHH
Confidence 6777777777777777777777777777777776642 21111 23467777888
Q ss_pred HHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHH-----HHHhhCchhhhccchhhhhhhchHHHHHHHHHHHH
Q 019786 183 ISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPP-----AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 257 (336)
Q Consensus 183 ~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 257 (336)
.+..+.++..++.++..++.+.. .|..........+. ....++......++.... ....+...+..+
T Consensus 92 ~a~~~~~~~~~y~e~~~k~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a- 163 (222)
T TIGR00803 92 SALLSSGFAGVYFEKILKDGDTM---FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY----PTAVWIVGLLNV- 163 (222)
T ss_pred HHHHHHhhhHHHHHHcccCCCCc---hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC----chHHHHHHHHHH-
Confidence 88888889999998876554322 22222222111111 111111111111111100 112222222222
Q ss_pred HHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHh
Q 019786 258 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 319 (336)
Q Consensus 258 ~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~ 319 (336)
..+.+....+++.++.+.++...++++++.++++++|||++|..++.|..+++.|+.+|
T Consensus 164 ---~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 164 ---GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred ---hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 22233456789999999999999999999999999999999999999999999998765
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.03 E-value=1.7e-09 Score=88.73 Aligned_cols=134 Identities=21% Similarity=0.169 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHH
Q 019786 178 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 257 (336)
Q Consensus 178 ~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 257 (336)
.+++++|++.+++..++.|--.+++||..-+.........++..........+... + .+ .+.|..++.+|+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~-~----~~----~k~~lflilSGl 75 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGG-E----IG----PKSWLFLILSGL 75 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceeccc-c----cC----cceehhhhHHHH
Confidence 47899999999999999998889999999999999888888887766655433210 0 11 245677889998
Q ss_pred HHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 258 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 258 ~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.+-...++.|++++.-.+.......-+.++++.+++++++||++|..+++|++++.+|..+.+
T Consensus 76 a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 76 AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 888888888999999998888889999999999999999999999999999999999987654
No 38
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.93 E-value=2.1e-07 Score=86.80 Aligned_cols=212 Identities=17% Similarity=0.174 Sum_probs=156.9
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchh
Q 019786 53 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALE 132 (336)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (336)
+.+.+..-+..|++.+++....+.|++++++|.+.-+. | ...
T Consensus 41 ~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiS-----------------------t---------------g~Q 82 (269)
T PF06800_consen 41 SGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPIS-----------------------T---------------GLQ 82 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccc-----------------------h---------------hHH
Confidence 34778888999999999999999999999999998888 1 777
Q ss_pred hHHHHHHHHHHhcCcCChhhHH----HHHHHhhhheeeeccccc--------ccHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 019786 133 PFFNAAASQFILGQQLPLTLWL----SLAPVVIGVSMASLTELS--------FNWTGFISAMISNISFTYRSIYSKKAMT 200 (336)
Q Consensus 133 Pi~~~~~~~l~l~~~~~~~~~~----sl~~~~~Gv~l~~~~~~~--------~~~~G~l~~l~s~~~~a~~~v~~k~~~~ 200 (336)
-+.+.+.+.++++|-.+..+++ ++++.++|+.+.+..|.+ ....|....+++.+.|..|.+..|- .
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~ 160 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--F 160 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--c
Confidence 7889999999999987776654 888999999988765432 2367999999999999999999765 4
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHH
Q 019786 201 DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAV 280 (336)
Q Consensus 201 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si 280 (336)
+.|++....=++....+..+.+....+.+ . + ++..+. -+..|+.--..|...+.+.++.+..+.=.
T Consensus 161 ~~~~~~~~lPqaiGm~i~a~i~~~~~~~~-~-~-------~k~~~~-----nil~G~~w~ignl~~~is~~~~G~a~af~ 226 (269)
T PF06800_consen 161 HVSGWSAFLPQAIGMLIGAFIFNLFSKKP-F-F-------EKKSWK-----NILTGLIWGIGNLFYLISAQKNGVATAFT 226 (269)
T ss_pred CCChhHhHHHHHHHHHHHHHHHhhccccc-c-c-------ccchHH-----hhHHHHHHHHHHHHHHHhHHhccchhhhh
Confidence 67888777766555555444444333111 1 1 111111 13344444455555566677888888777
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchhh----hHHHHHHHHHHHH
Q 019786 281 GNVLKRVFVIGFSILAFGNKISTQT----GIGTVIAIAGVAA 318 (336)
Q Consensus 281 ~~~l~~v~~~i~~~~~fge~~s~~~----~~G~~li~~gv~~ 318 (336)
+.-+..+.+.+.|.++++|+=+.++ .+|.++++.|..+
T Consensus 227 lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 227 LSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 8888899999999999999977654 4688888887654
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.79 E-value=1.5e-08 Score=89.17 Aligned_cols=220 Identities=14% Similarity=0.100 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHH
Q 019786 56 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFF 135 (336)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~ 135 (336)
.+++..|.+++..+.+..+..+++.++.+.++.+. ...--|
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~---------------------------------------~CNaAF 92 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIF---------------------------------------ACNAAF 92 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHH---------------------------------------HhhHHH
Confidence 45667788888888899999999999999999999 899999
Q ss_pred HHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc--ccccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHH
Q 019786 136 NAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISI 213 (336)
Q Consensus 136 ~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~--~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~ 213 (336)
+.+++++.+|+|+...++++.++.+.|+++++..| ...++.|+.+++.|+...|+|.+..|+...+.+--+...+.+.
T Consensus 93 VfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~ 172 (290)
T KOG4314|consen 93 VFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSC 172 (290)
T ss_pred HHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHH
Confidence 99999999999999999999999999999998544 4568999999999999999999999998876554444444444
Q ss_pred HHHHHH----HHHHH-HhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHH
Q 019786 214 IALFVC----IPPAI-IVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVF 288 (336)
Q Consensus 214 ~~~~~l----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~ 288 (336)
.+..=+ .|... ...+-. .|++ +.... |..+...+.+....|......+....|...|+......+.
T Consensus 173 LGF~NL~~~~~~~lIL~~T~VE----~~qs-FA~~P----WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~ 243 (290)
T KOG4314|consen 173 LGFFNLCFISFPALILAFTGVE----HLQS-FAAAP----WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPG 243 (290)
T ss_pred HHHHHHHHHhhhHHHHHHhchH----HHHH-HhhCC----chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcc
Confidence 433222 22211 111100 0110 11111 3344444444445555554556788899999988888888
Q ss_pred HHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhh
Q 019786 289 VIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 323 (336)
Q Consensus 289 ~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~ 323 (336)
-.....++-+-..+.....|..++..|..+.-...
T Consensus 244 NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 244 NAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 88888887766788888999999999988766543
No 40
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.79 E-value=6.5e-08 Score=79.57 Aligned_cols=123 Identities=20% Similarity=0.263 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCC-CCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccch
Q 019786 6 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV 83 (336)
Q Consensus 6 s~~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~v 83 (336)
.....++.|..+++.+ |.+-+..|-.+...++... ...|+.+ ....++|.|..+..-|+..+.+..+++.+++.-.+
T Consensus 15 a~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~a 93 (140)
T COG2510 15 AGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKA 93 (140)
T ss_pred HHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCc
Confidence 3456788999998887 8999999999987776543 3334332 22357788889999999999999999999999999
Q ss_pred hhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhh
Q 019786 84 SFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 163 (336)
Q Consensus 84 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv 163 (336)
|-...+. .+.|.++.+++++++|||++..+|+++.+.++|+
T Consensus 94 s~VvPld---------------------------------------k~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Ga 134 (140)
T COG2510 94 SRVVPLD---------------------------------------KTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGA 134 (140)
T ss_pred ceEEEcc---------------------------------------cccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCe
Confidence 9999999 9999999999999999999999999999999999
Q ss_pred eeeec
Q 019786 164 SMASL 168 (336)
Q Consensus 164 ~l~~~ 168 (336)
.+.+.
T Consensus 135 ilvs~ 139 (140)
T COG2510 135 ILVSL 139 (140)
T ss_pred eeEec
Confidence 98764
No 41
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.79 E-value=1.1e-08 Score=83.40 Aligned_cols=105 Identities=19% Similarity=0.330 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCC--CCCCHHHHHHHHHHHHHHH-HhhhhhhhhccccchhhhhhhccccccccccCchh
Q 019786 28 VIHLLVGVVYCLVSWAV-GLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENH 103 (336)
Q Consensus 28 ~~r~~~~~l~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~ 103 (336)
.+|+..+.+.+...... ++.++ +..+++.+...+..+.+.. .+..+...|+++.+ +....+.
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~------------- 67 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIF------------- 67 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHH-------------
Confidence 46888887765543332 22111 1122344556666666664 88999999999999 5777887
Q ss_pred HHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccccc
Q 019786 104 FILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS 172 (336)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~~~ 172 (336)
++.|+++++++.+++|||++++++.++.++++|+.++..+|.+
T Consensus 68 --------------------------~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 68 --------------------------SLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred --------------------------HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999999999999999999877654
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.78 E-value=4.5e-07 Score=86.00 Aligned_cols=141 Identities=15% Similarity=0.118 Sum_probs=105.7
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHH
Q 019786 172 SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISD 251 (336)
Q Consensus 172 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (336)
+....|.++.++++++|+...++.|.. .+++|.++..+....+.+++.+........+..+.. .. .. +.+..
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~----~~--~~-~~~~~ 75 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL----IQ--TP-QKIFM 75 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH----Hc--CH-HHHHH
Confidence 345689999999999999999999765 679999999999999988887765443221111000 00 11 11112
Q ss_pred HHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 252 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 252 l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
....+......+...+.++++.++...++..++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 223233333445566788999999999999999999999999999999999999999999999998653
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.72 E-value=7.7e-07 Score=82.34 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHH
Q 019786 176 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 255 (336)
Q Consensus 176 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (336)
.|.++.++++++|+...+..|. ..++||.++.++....+.+++.+........+..+..+ ........+..+...
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERL----KRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH----hCcccchHHHHHHHH
Confidence 4889999999999999999987 46799999999999999888777654433211100000 000011122334455
Q ss_pred HHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHh
Q 019786 256 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 319 (336)
Q Consensus 256 g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~ 319 (336)
|+.........+.+++++++.+.++...+.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 5555555566678899999999999999999999999999999999999999999999998764
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.61 E-value=1.4e-06 Score=81.90 Aligned_cols=132 Identities=11% Similarity=0.051 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHH
Q 019786 178 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 257 (336)
Q Consensus 178 ~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 257 (336)
+++.+++++++|.+++..||..++.++. ..+....+.+.+.|......... .+.. ... ..+......+.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~----~~~~--~~~---~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQV----GWSR--LPA---TFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccC----CCCC--cch---hhHHHHHHHHH
Confidence 4678999999999999999887775543 35555666667777655421110 1110 001 11223344455
Q ss_pred HHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 258 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 258 ~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.........+.+.++.++...+...+..|+++.+++++++||+++..+++|.++++.|+.+..
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 555555666778899999999999999999999999999999999999999999999998754
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.45 E-value=8.7e-06 Score=79.51 Aligned_cols=135 Identities=14% Similarity=0.207 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhc-CCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHH
Q 019786 177 GFISAMISNISFTYRSIYSKKAMT-DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 255 (336)
Q Consensus 177 G~l~~l~s~~~~a~~~v~~k~~~~-~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (336)
-.+..+..-++|+.++++.|...+ .++|....++....++++++|+....+.+...+ .. ..+.+..+...
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~--------~~-~~~~~~~l~l~ 84 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP--------PL-SVSILSKIGLL 84 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC--------cc-hHHHHHHHHHH
Confidence 345667788899999999998875 489999999999999999999887655321100 00 01223344455
Q ss_pred HHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHH------hCCCCchhhhHHHHHHHHHHHHhh
Q 019786 256 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA------FGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 256 g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~------fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
|+++..++...+..+++++|...++...+.|+++.++++++ ++|+++..+++|.++.++|+.+..
T Consensus 85 g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 85 GFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 66554555567788999999999999999999999999999 699999999999999999998654
No 46
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.35 E-value=8.2e-06 Score=75.13 Aligned_cols=118 Identities=20% Similarity=0.118 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHhhhhhhhhccccch
Q 019786 6 NVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAV 83 (336)
Q Consensus 6 s~~~~i~nK~~~~~f~-~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~~~v 83 (336)
........|...++.+ .+.....+|+.++.+++.+......+.. ..+.+.+...+..+++ ..++..+++.++++.++
T Consensus 140 ~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 218 (260)
T TIGR00950 140 FALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDP 218 (260)
T ss_pred HHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3445667788776654 3445555788888777665544322222 2355556556655655 46788999999999999
Q ss_pred hhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhh
Q 019786 84 SFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 163 (336)
Q Consensus 84 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv 163 (336)
+..+.+. .++|+++++++++++||+++..++.+..+++.|+
T Consensus 219 ~~~s~~~---------------------------------------~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 219 SAASILA---------------------------------------LAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred hHHHHHH---------------------------------------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999 9999999999999999999999999999999986
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.16 E-value=8.8e-06 Score=77.60 Aligned_cols=64 Identities=23% Similarity=0.378 Sum_probs=58.0
Q ss_pred HHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHh
Q 019786 65 VCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFIL 144 (336)
Q Consensus 65 ~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l 144 (336)
+....+..+...|+.+.+.+..+.+. +..-+++++++..++
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg---------------------------------------~~~lv~~~~~a~~~l 98 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLG---------------------------------------ALSLVFNAVLARFFL 98 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHH---------------------------------------hhhhhhHHHHhHHHh
Confidence 34567788999999999999999998 888999999999999
Q ss_pred cCcCChhhHHHHHHHhhhheeee
Q 019786 145 GQQLPLTLWLSLAPVVIGVSMAS 167 (336)
Q Consensus 145 ~~~~~~~~~~sl~~~~~Gv~l~~ 167 (336)
|||++++.+.+..+++.|..++.
T Consensus 99 ~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 99 GEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred cccchHhHHhhHHHHHhhheeeE
Confidence 99999999999999999998763
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.12 E-value=0.00011 Score=69.63 Aligned_cols=130 Identities=18% Similarity=0.164 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHH
Q 019786 176 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 255 (336)
Q Consensus 176 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (336)
.+.++++.++++|+...+..|...++++|.....+....+.+++++.. ..+...++ . ... ....
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~~---------~-~~~---~~~~ 67 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQF---------P-KRY---LLAG 67 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---cccccccc---------c-HHH---HHHH
Confidence 456788999999999999999999999999999999999988887652 12211110 0 011 1111
Q ss_pred HHHHHHHHHHHHhHh----hccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 256 GMFYHLYNQLATNTL----ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 256 g~~~~~~~~~~~~~l----~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
+.....+....+... +..++...++...+.|+++.++++++++|+++..+++|+++.++|+.+...
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence 221212222222233 456778889999999999999999999999999999999999999987543
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.11 E-value=0.00018 Score=70.05 Aligned_cols=139 Identities=13% Similarity=0.064 Sum_probs=98.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-hhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHH
Q 019786 174 NWTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 252 (336)
Q Consensus 174 ~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (336)
++.-..+.+.-=.+...+++++|...++.+ |+.+..++...+.+.+.+.... ......+ + +. ....+..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~--~----~~--~~~~~~~l 117 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPR--I----KS--LKLFLKNF 117 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCC--C----CC--HHHHHHHH
Confidence 333344444444445666888999999999 9999999999998776554321 1110000 0 00 01123344
Q ss_pred HHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 253 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 253 ~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
+..|+++...+...+.+++++++...++...++|+++.++++++++|+++..++.|.+++++|+.+...
T Consensus 118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 455555554445556788999999999999999999999999999999999999999999999987653
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.07 E-value=0.00022 Score=67.39 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHH
Q 019786 179 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF 258 (336)
Q Consensus 179 l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 258 (336)
+..+.-.+.|+...+..|...+++||.....+....+++++++........ . + +. +.+......|.+
T Consensus 11 ~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~-~-------~~----~~~~~~~~~g~~ 77 (292)
T PRK11272 11 GALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHP-L-P-------TL----RQWLNAALIGLL 77 (292)
T ss_pred HHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C-C-------cH----HHHHHHHHHHHH
Confidence 456677889999999999888899999999999999999888875442211 1 0 00 111222334443
Q ss_pred HH-HHHHHHHhHh-hccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 259 YH-LYNQLATNTL-ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 259 ~~-~~~~~~~~~l-~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.. ..+...+... ++.++...++...+.|+++.+++.+ ++|+++..+++|.++.++|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~ 140 (292)
T PRK11272 78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN 140 (292)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence 32 2223334455 8888888999999999999999985 799999999999999999998764
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.03 E-value=0.00017 Score=68.36 Aligned_cols=123 Identities=15% Similarity=0.187 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHH
Q 019786 179 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF 258 (336)
Q Consensus 179 l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 258 (336)
+..++++++|+...+..|...+++||..+.++....+++.+++.. ..++. .+ . .+...|+.
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~---~~~~~---~~----------~---~~~~~g~~ 67 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFV---ARPKV---PL----------N---LLLGYGLT 67 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHh---cCCCC---ch----------H---HHHHHHHH
Confidence 567889999999999999888899999999999988776665542 11110 00 1 11222332
Q ss_pred HHHHH-HHHHhHhhc-cChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 259 YHLYN-QLATNTLER-VAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 259 ~~~~~-~~~~~~l~~-~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
....+ ...+...++ .++...++...+.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 22222 223445565 467788888999999999999999999999999999999999988654
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.03 E-value=0.00015 Score=60.59 Aligned_cols=119 Identities=13% Similarity=0.037 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHH
Q 019786 176 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 255 (336)
Q Consensus 176 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (336)
.|.++.+.+.++.+..+++.|+-+++.++.+..... . ........| ...++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~------~~~~~~~~p--------------------~~~i~l 53 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--I------AALLAFGLA--------------------LRAVLL 53 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--H------HHHHHHhcc--------------------HHHHHH
Confidence 377889999999999999999888776543322110 0 000000000 001233
Q ss_pred HHHHHHHHH-HHHhHhhccChhHHHHHHHHHHHHHHHHHHH--HhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 256 GMFYHLYNQ-LATNTLERVAPLTHAVGNVLKRVFVIGFSIL--AFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 256 g~~~~~~~~-~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~--~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
|+..+...+ ....++++.+...........++...+.++. +|||++|..+++|++++++|+.+.+..
T Consensus 54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 443333333 3356789998888877777777777777774 899999999999999999999997743
No 53
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.97 E-value=8.4e-05 Score=60.53 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=59.8
Q ss_pred HHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHh
Q 019786 65 VCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFIL 144 (336)
Q Consensus 65 ~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l 144 (336)
++++....+...+++.++++.+..+- ++.|+++++.+++++
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~---------------------------------------~l~~v~~~~~~~l~f 85 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPML---------------------------------------SLNFVWVTLAAVKLW 85 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHH---------------------------------------HHHHHHHHHHHHHHh
Confidence 55678899999999999999999998 899999999999999
Q ss_pred cCcCChhhHHHHHHHhhhheeeec
Q 019786 145 GQQLPLTLWLSLAPVVIGVSMASL 168 (336)
Q Consensus 145 ~~~~~~~~~~sl~~~~~Gv~l~~~ 168 (336)
|||++.+++++++++++|+.++..
T Consensus 86 ~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 86 HEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999987643
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.93 E-value=0.00021 Score=67.68 Aligned_cols=121 Identities=18% Similarity=0.185 Sum_probs=85.6
Q ss_pred HHHHHHHhhhhcC-CChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHH
Q 019786 189 TYRSIYSKKAMTD-MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLAT 267 (336)
Q Consensus 189 a~~~v~~k~~~~~-~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 267 (336)
...++++|...++ ..|..+..+....+.+.+.+... .+.....+ .+. +.+..+...|++........+
T Consensus 15 ~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~----~~~~~~~~~g~~~~~~~~~~~ 83 (302)
T TIGR00817 15 VYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLK------ISS----ALLKLLLPVAIVHTIGHVTSN 83 (302)
T ss_pred HHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCC------CCH----HHHHHHHHHHHHHHHHHHHHH
Confidence 4455778888887 55788888888777666554411 11110000 011 112233444555444555667
Q ss_pred hHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 268 NTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 268 ~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.+++++++...++...+.|+++.+++.++++|+++..++.|.+++++|+.+..
T Consensus 84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 88999999999999999999999999999999999999999999999997643
No 55
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.79 E-value=0.001 Score=62.34 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=104.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHH
Q 019786 173 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 252 (336)
Q Consensus 173 ~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (336)
.+..|+++++.+-+.|.+--.+.| ..++.++.++..+....+.++++.........+..+ +....++.+...
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~k-ll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~-------~~~~~p~~~~~~ 75 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFK-LLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELK-------QLLKQPKTLLML 75 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHhCcHHHHHH
Confidence 456799999999999999999885 458899999999999999988877666554332222 111122333333
Q ss_pred HHHHHHHHHHHHHH-HhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHh
Q 019786 253 FWVGMFYHLYNQLA-TNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 319 (336)
Q Consensus 253 ~~~g~~~~~~~~~~-~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~ 319 (336)
...++.- ..|-.. .++..+-.....|..=++.|.+.+++|.++++|+++..|++...+..+|+..-
T Consensus 76 ~l~a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 76 ALTALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHHHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3333332 334433 46788888999999999999999999999999999999999999999999753
No 56
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.78 E-value=0.00031 Score=66.46 Aligned_cols=118 Identities=20% Similarity=0.269 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH-HHHhhhhhhhhccccchhhh
Q 019786 8 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFT 86 (336)
Q Consensus 8 ~~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~~~vs~~ 86 (336)
...++.|...++.+ |...+. ...++.+.+.+......+ ....+...+...+..+++ ..++..+++.++++.+.+.+
T Consensus 162 ~~~v~~r~~~~~~~-~~~~~~-~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~a 238 (293)
T PRK10532 162 IYILSGQRAGAEHG-PATVAI-GSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTF 238 (293)
T ss_pred HHHHHHHHHhccCC-chHHHH-HHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Confidence 34555666655544 555544 445555444443332222 122244444444455555 45778899999999999999
Q ss_pred hhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheee
Q 019786 87 HTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 166 (336)
Q Consensus 87 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~ 166 (336)
+... .++|++..++++++++|+++..++++.++++.|+...
T Consensus 239 s~~~---------------------------------------~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 239 GTLM---------------------------------------SMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred HHHH---------------------------------------HhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 9998 9999999999999999999999999999999998876
Q ss_pred e
Q 019786 167 S 167 (336)
Q Consensus 167 ~ 167 (336)
.
T Consensus 280 ~ 280 (293)
T PRK10532 280 T 280 (293)
T ss_pred H
Confidence 4
No 57
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.67 E-value=0.0011 Score=53.83 Aligned_cols=71 Identities=17% Similarity=0.186 Sum_probs=56.1
Q ss_pred HHHHHHHH-HHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhH
Q 019786 253 FWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 324 (336)
Q Consensus 253 ~~~g~~~~-~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~ 324 (336)
+..|.... ..+...+.+.++.++ ..+....+.|+++.+++.++++|+++..++.|.+++++|+.+..+.+.
T Consensus 38 ~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 38 ILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 33344443 333444567788885 677888899999999999999999999999999999999998776543
No 58
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.65 E-value=0.0098 Score=57.73 Aligned_cols=227 Identities=12% Similarity=0.043 Sum_probs=135.1
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcch
Q 019786 52 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSAL 131 (336)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (336)
.+.+.+...+..|++.+.++.....+++++++|.+..+. + .+
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs---------------------~-----------------Gl 109 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIA---------------------I-----------------GI 109 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHH---------------------H-----------------HH
Confidence 356677888889999999999999999999998877776 2 66
Q ss_pred hhHHHHHHHHHHhcCcC---C----hhhHHHHHHHhhhheeeec----ccc---------cccHHHHHHHHHHHHHHHHH
Q 019786 132 EPFFNAAASQFILGQQL---P----LTLWLSLAPVVIGVSMASL----TEL---------SFNWTGFISAMISNISFTYR 191 (336)
Q Consensus 132 ~Pi~~~~~~~l~l~~~~---~----~~~~~sl~~~~~Gv~l~~~----~~~---------~~~~~G~l~~l~s~~~~a~~ 191 (336)
.-+...++..++++|-. + ..-.+++++.++|+.+.+. .|. .....|++.+++|.+.++.|
T Consensus 110 ~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f 189 (345)
T PRK13499 110 TLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACF 189 (345)
T ss_pred HHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHH
Confidence 66677788888888643 2 2245688899999998765 332 12378999999999999999
Q ss_pred H-------HHHhhhh-cCCChhhHHHHHHH---HHHHHHH-HHHHHh--hCchhhhccchhhhhhhc----hHHHHHHHH
Q 019786 192 S-------IYSKKAM-TDMDSTNIYAYISI---IALFVCI-PPAIIV--EGPQLIKHGLSDAISKVG----MVKFISDLF 253 (336)
Q Consensus 192 ~-------v~~k~~~-~~~~~~~l~~~~~~---~~~~~l~-~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~l~ 253 (336)
+ ...+... .+.++.....-+.. .+.+..- ++.... .... ++...+... ..+-...-+
T Consensus 190 ~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~-----~~~~~~~~~~~~~~~~n~l~~~ 264 (345)
T PRK13499 190 SFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKD-----LSLKADFSLAKPLLITNVLLSA 264 (345)
T ss_pred HHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----cccchhccccchhHHHHHHHHH
Confidence 9 4333211 23444332222222 2222222 111111 1111 100001100 011122223
Q ss_pred HHHHHHHHHHHHHHhHhhccChh----HHHHHHHHHHHHHHHHHHHHhCCCCc------hhhhHHHHHHHHHHHHhhhh
Q 019786 254 WVGMFYHLYNQLATNTLERVAPL----THAVGNVLKRVFVIGFSILAFGNKIS------TQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 254 ~~g~~~~~~~~~~~~~l~~~s~~----~~si~~~l~~v~~~i~~~~~fge~~s------~~~~~G~~li~~gv~~~~~~ 322 (336)
..|+.-...+......-++.+.. ...+...+.-+++.+.|. +++|.=+ ...++|+++++.|..+..+.
T Consensus 265 l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 265 LAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 44444444444444444444322 222444666688888888 4998755 55678999999998876543
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.60 E-value=0.00094 Score=63.30 Aligned_cols=132 Identities=13% Similarity=0.078 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHH
Q 019786 177 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 256 (336)
Q Consensus 177 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 256 (336)
|.+++++++++|+...+..|+.. +.++.+.. ....+.++..........+.. .....+..-+..|
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~------------~~~~~~~~g~l~G 66 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEF------------WALSIFLVGLLSG 66 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc------------cccHHHHHHHHHH
Confidence 57899999999999999999876 66666555 244444444333333222211 0013344455666
Q ss_pred HHHHHHHHHHHhHhhccChhHHHHHHH-HHHHHHHHHHHHHhCCCCchhh----hHHHHHHHHHHHHhhhhh
Q 019786 257 MFYHLYNQLATNTLERVAPLTHAVGNV-LKRVFVIGFSILAFGNKISTQT----GIGTVIAIAGVAAYSYIK 323 (336)
Q Consensus 257 ~~~~~~~~~~~~~l~~~s~~~~si~~~-l~~v~~~i~~~~~fge~~s~~~----~~G~~li~~gv~~~~~~~ 323 (336)
+.-...|...+.+.++.+....-.... +.++...+++.++|+|+.+..+ ++|.++++.|+.+....+
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 666566677788889988877755555 7888999999999999999999 999999999998876543
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.39 E-value=0.01 Score=54.61 Aligned_cols=140 Identities=17% Similarity=0.116 Sum_probs=94.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhcC-CChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHH
Q 019786 174 NWTGFISAMISNISFTYRSIYSKKAMTD-MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 252 (336)
Q Consensus 174 ~~~G~l~~l~s~~~~a~~~v~~k~~~~~-~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (336)
...+....++.++.++......|+..++ .++..........+.+...+... .+..+... ... ..+...
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~~---~~~~~~ 73 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLL-LEPRGLRP-------ALR---PWLLLL 73 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhcccccc-------ccc---chHHHH
Confidence 3567778888889999999999888776 45555555566656555332221 11100000 000 011122
Q ss_pred HHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHH-HHhCCCCchhhhHHHHHHHHHHHHhhhhhH
Q 019786 253 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI-LAFGNKISTQTGIGTVIAIAGVAAYSYIKA 324 (336)
Q Consensus 253 ~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~-~~fge~~s~~~~~G~~li~~gv~~~~~~~~ 324 (336)
+..+..........+.+++++++..........|+++.+++. ++++|+++..++.|..+.+.|+.+....+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 232333334444556678999999999999999999999997 667999999999999999999998765443
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.32 E-value=0.0031 Score=51.33 Aligned_cols=54 Identities=17% Similarity=0.105 Sum_probs=48.1
Q ss_pred HhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 267 TNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 267 ~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
..++++.+.........+.++.+.+.|+++|||++|..+++|++++++|+....
T Consensus 55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 456788888888777779999999999999999999999999999999998754
No 62
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.28 E-value=0.0043 Score=58.99 Aligned_cols=125 Identities=15% Similarity=0.156 Sum_probs=88.2
Q ss_pred HHHHHHHHhhhhcCC----ChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHH
Q 019786 188 FTYRSIYSKKAMTDM----DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN 263 (336)
Q Consensus 188 ~a~~~v~~k~~~~~~----~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 263 (336)
+..+.+.++++.++. .|..+++.+.....+...+.......++..+ . . +......++......
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~---------~-~---~~~~~~~~~~~~~~~ 78 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRK---------I-P---LKKYAILSFLFFLAS 78 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCc---------C-h---HHHHHHHHHHHHHHH
Confidence 344566677777542 2567777777777776666544333111111 1 1 111233345555555
Q ss_pred HHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHH
Q 019786 264 QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 264 ~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~ 325 (336)
.....++++.+..+..+....+++.+.+++.++++++.+..++.+.+++.+|+.+....+.+
T Consensus 79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~ 140 (303)
T PF08449_consen 79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS 140 (303)
T ss_pred HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence 66677889999999999999999999999999999999999999999999999998876543
No 63
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.00012 Score=66.89 Aligned_cols=217 Identities=14% Similarity=0.123 Sum_probs=151.4
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcch
Q 019786 52 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSAL 131 (336)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (336)
.+.+.+..-+..|++.+.+....+-|++++++|.+..+.. .+
T Consensus 54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiSt--------------------------------------G~ 95 (288)
T COG4975 54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPIST--------------------------------------GM 95 (288)
T ss_pred cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccc--------------------------------------hh
Confidence 3556677777888888899999999999999999988881 66
Q ss_pred hhHHHHHHHHHHhcCcCChhhH----HHHHHHhhhheeeeccccc--------ccHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019786 132 EPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMASLTELS--------FNWTGFISAMISNISFTYRSIYSKKAM 199 (336)
Q Consensus 132 ~Pi~~~~~~~l~l~~~~~~~~~----~sl~~~~~Gv~l~~~~~~~--------~~~~G~l~~l~s~~~~a~~~v~~k~~~ 199 (336)
.-+-+.+.+.+.++|-.+..+. .++++.++|+.+-+..|.+ +--.|....+.|.+.|..|.+..+..
T Consensus 96 QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f- 174 (288)
T COG4975 96 QLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF- 174 (288)
T ss_pred hHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc-
Confidence 6777888889999998777765 4888899999999876631 12578888889999999999988755
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHH
Q 019786 200 TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 279 (336)
Q Consensus 200 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~s 279 (336)
+.|.++...-++.-+.+..+.+....+.+...|+.+ .-...|+.--..|...+.+-++.+-.+.=
T Consensus 175 -~v~g~saiLPqAiGMv~~ali~~~~~~~~~~~K~t~--------------~nii~G~~Wa~GNl~ml~a~~~~GvAt~F 239 (288)
T COG4975 175 -DVDGLSAILPQAIGMVIGALILGFFKMEKRFNKYTW--------------LNIIPGLIWAIGNLFMLLAAQKVGVATSF 239 (288)
T ss_pred -cccchhhhhHHHHHHHHHHHHHhhcccccchHHHHH--------------HHHhhHHHHHhhHHHHHHhhhhhceeeee
Confidence 477777666666555555544444333333322211 12334444444555555555666554443
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhh----HHHHHHHHHHHHhhhh
Q 019786 280 VGNVLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYSYI 322 (336)
Q Consensus 280 i~~~l~~v~~~i~~~~~fge~~s~~~~----~G~~li~~gv~~~~~~ 322 (336)
-+.-+.-+.+.+-|.++++|+=|..++ +|+++++.|..+....
T Consensus 240 SlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~ 286 (288)
T COG4975 240 SLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIA 286 (288)
T ss_pred eHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhee
Confidence 344466788888999999999887775 5888888877665443
No 64
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.13 E-value=0.0085 Score=50.50 Aligned_cols=122 Identities=13% Similarity=0.143 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHH-HhCCCCCC---------CC--CHHHHHHHHHHHHHH
Q 019786 6 NVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRA---------PI--DSKLLKLLIPVAVCH 67 (336)
Q Consensus 6 s~~~~i~nK~~~~~------f~~p~~l~~~r~~~~~l~~~~~~-~~~~~~~~---------~~--~~~~~~~~~~~~~~~ 67 (336)
+..-.++.|..+++ -..|..+.......+.+.+.+.. ..+.++.. +. +.+.+..++..+++.
T Consensus 12 ~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T PF03151_consen 12 SALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLA 91 (153)
T ss_pred HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHH
Confidence 34445666777654 22577777777777776665543 33322211 00 234566666777777
Q ss_pred HHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCc
Q 019786 68 ALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQ 147 (336)
Q Consensus 68 ~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~ 147 (336)
...+...+..+++++.-.+++.. ....+.+.+++.++++|+
T Consensus 92 ~~~n~~~f~~i~~tS~lt~~v~~---------------------------------------~~K~~~~i~~s~~~f~~~ 132 (153)
T PF03151_consen 92 FLYNLSSFLLIKLTSPLTYSVLG---------------------------------------NVKRILVILLSVIFFGEP 132 (153)
T ss_pred HHHHHHHHHHhhhcChhHHHHHH---------------------------------------HHHHHHHHHHHhhhcCCc
Confidence 78889999999999999999998 888999999999999999
Q ss_pred CChhhHHHHHHHhhhheee
Q 019786 148 LPLTLWLSLAPVVIGVSMA 166 (336)
Q Consensus 148 ~~~~~~~sl~~~~~Gv~l~ 166 (336)
++..++.++.+.+.|+.+-
T Consensus 133 ~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 133 ITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred CCHHHHHHHHHHHHHHhee
Confidence 9999999999999998764
No 65
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.07 E-value=0.0015 Score=54.65 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHH
Q 019786 59 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAA 138 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~ 138 (336)
.+...-+++.++..+++.+++..+++.+.... +..+.++++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~---------------------------------------sl~~~~v~~ 90 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLL---------------------------------------SLSYALVYL 90 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH---------------------------------------HHHHHHHHH
Confidence 45555666788999999999999999998887 777888888
Q ss_pred HHHH--HhcCcCChhhHHHHHHHhhhheeeeccc
Q 019786 139 ASQF--ILGQQLPLTLWLSLAPVVIGVSMASLTE 170 (336)
Q Consensus 139 ~~~l--~l~~~~~~~~~~sl~~~~~Gv~l~~~~~ 170 (336)
.++. ++||++|..++++++++++|+.++..++
T Consensus 91 ~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 91 AAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 8885 8999999999999999999999886543
No 66
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.06 E-value=0.0024 Score=60.62 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=120.0
Q ss_pred HHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHH
Q 019786 63 VAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF 142 (336)
Q Consensus 63 ~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l 142 (336)
.-+....+...++.|+.+.+.+..+.+. ++..+..++++..
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLG---------------------------------------Alsvi~saila~~ 110 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLG---------------------------------------ALSVIISAILASF 110 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccch---------------------------------------hHHHHHHHHHHHH
Confidence 3344567888999999999999999999 8999999999999
Q ss_pred HhcCcCChhhHHHHHHHhhhheeeecccccc----c---------HHHH-HHHHHHHHHHHHHHHHHhhhhcCCChhhHH
Q 019786 143 ILGQQLPLTLWLSLAPVVIGVSMASLTELSF----N---------WTGF-ISAMISNISFTYRSIYSKKAMTDMDSTNIY 208 (336)
Q Consensus 143 ~l~~~~~~~~~~sl~~~~~Gv~l~~~~~~~~----~---------~~G~-l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~ 208 (336)
++|||++..-.+++.++++|..++....++. + -.++ ++..+-.+...+-....|. +....+++
T Consensus 111 ~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p---~~g~tnil 187 (335)
T KOG2922|consen 111 FLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILIFFYAP---RYGQTNIL 187 (335)
T ss_pred HHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHheeecc---ccccccee
Confidence 9999999999999999999999876433211 0 1122 1222222222222222322 22233344
Q ss_pred HHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHH-HHHHHHHHH
Q 019786 209 AYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTH-AVGNVLKRV 287 (336)
Q Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~-si~~~l~~v 287 (336)
.|....+.+-.+-...+-.-....+..++.. .+...+..|..+..........-....++++..++... .+.-.+-+-
T Consensus 188 vyi~i~s~iGS~tV~svKalg~aiklt~~g~-~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTt 266 (335)
T KOG2922|consen 188 VYIGICSLIGSLTVMSVKALGIAIKLTFSGN-NQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTT 266 (335)
T ss_pred ehhhHhhhhcceeeeeHHHHHHHHHHHhcCC-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHH
Confidence 4443333332111100000000001001100 11111223333332222222222223466777666554 445556677
Q ss_pred HHHHHHHHHhCCC--Cchhhh----HHHHHHHHHHHHhhhhh
Q 019786 288 FVIGFSILAFGNK--ISTQTG----IGTVIAIAGVAAYSYIK 323 (336)
Q Consensus 288 ~~~i~~~~~fge~--~s~~~~----~G~~li~~gv~~~~~~~ 323 (336)
+++..|.++|.|- .+..++ .|...++.|+.+.+..|
T Consensus 267 l~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 267 LVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeec
Confidence 8888899999864 444444 57788888888765443
No 67
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.93 E-value=0.0032 Score=58.30 Aligned_cols=77 Identities=23% Similarity=0.287 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHH
Q 019786 249 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 249 ~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~ 325 (336)
.......++++...|...+.++++.+|.+..++...|.+.+.++++++++++++..||.+..+..+|+.+....+..
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 34556778888899999999999999999999999999999999999999999999999999999999987765443
No 68
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.91 E-value=0.016 Score=56.04 Aligned_cols=69 Identities=17% Similarity=0.135 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhh
Q 019786 255 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 323 (336)
Q Consensus 255 ~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~ 323 (336)
.+++-...|+....+.++++.....+++....+++.++++++++++.++.+++|+.+.++|+.+....+
T Consensus 85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 366667788888889999999999999999999999999999999999999999999999998766544
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.77 E-value=0.0063 Score=50.23 Aligned_cols=56 Identities=20% Similarity=0.215 Sum_probs=46.4
Q ss_pred hHhhccChh-HHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhh
Q 019786 268 NTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 323 (336)
Q Consensus 268 ~~l~~~s~~-~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~ 323 (336)
.++++.+.. .+++..-+..+.+.+.++++|||++|+.+++|+.++++|+...+..+
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 445666653 44666678899999999999999999999999999999999887644
No 70
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.62 E-value=0.079 Score=44.75 Aligned_cols=129 Identities=13% Similarity=0.168 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCC-hhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHH
Q 019786 178 FISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 256 (336)
Q Consensus 178 ~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 256 (336)
.++++.+...-+....++.|+.++.+ |+.-....+..+.+.+.......++++..+ ..+.++ | ....|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~------~~~~p~---w--~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS------LSSVPW---W--AYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch------hccCCh---H--HhccH
Confidence 46788999999999999999988876 999999999999998888777766542211 111221 2 12245
Q ss_pred HHHHHHHHHHHhHhhccChhHHHHHHHHHH-HHHHHHHHH-HhC---CCCchhhhHHHHHHHHHHH
Q 019786 257 MFYHLYNQLATNTLERVAPLTHAVGNVLKR-VFVIGFSIL-AFG---NKISTQTGIGTVIAIAGVA 317 (336)
Q Consensus 257 ~~~~~~~~~~~~~l~~~s~~~~si~~~l~~-v~~~i~~~~-~fg---e~~s~~~~~G~~li~~gv~ 317 (336)
+++..+-.......++.++.........-. +.+.+++.+ +|| ++++..+.+|.+++++|+.
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 555555555556679999887766555444 455566665 343 5689999999999999986
No 71
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.62 E-value=0.011 Score=48.75 Aligned_cols=72 Identities=15% Similarity=0.218 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHH
Q 019786 60 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAA 139 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~ 139 (336)
.+...++++.+..+...++++++++.+..+- .+..-+.+++.
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw--------------------------------------~GiG~v~~~~i 74 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALW--------------------------------------EGIGILFITLF 74 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHH--------------------------------------HHHHHHHHHHH
Confidence 4556677788889999999999998887774 05667788999
Q ss_pred HHHHhcCcCChhhHHHHHHHhhhheeeecc
Q 019786 140 SQFILGQQLPLTLWLSLAPVVIGVSMASLT 169 (336)
Q Consensus 140 ~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~ 169 (336)
+.+++||+++..+++++.+.++|+..+...
T Consensus 75 g~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 75 SVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999987543
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.53 E-value=0.11 Score=42.07 Aligned_cols=53 Identities=15% Similarity=0.267 Sum_probs=45.6
Q ss_pred hHhhccCh-hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 268 NTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 268 ~~l~~~s~-~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.++|+.+. +.+++-.-+..+.+.+.++++|||++|+.+++|+++++.|+...+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 35677765 445888889999999999999999999999999999999998754
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.49 E-value=0.012 Score=47.83 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHH
Q 019786 60 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAA 139 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~ 139 (336)
.+..-++++++..+...+++.++++.+..+-. +..-+.+++.
T Consensus 33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~--------------------------------------GlG~v~~~l~ 74 (110)
T PRK09541 33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWS--------------------------------------GVGIVLISLL 74 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH--------------------------------------HHHHHHHHHH
Confidence 34455666777888889999999998888750 5667778999
Q ss_pred HHHHhcCcCChhhHHHHHHHhhhheeeecc
Q 019786 140 SQFILGQQLPLTLWLSLAPVVIGVSMASLT 169 (336)
Q Consensus 140 ~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~ 169 (336)
+++++||++++.++.++.+.++|+..+...
T Consensus 75 g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 75 SWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999987543
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.38 E-value=0.02 Score=46.18 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHH
Q 019786 59 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAA 138 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~ 138 (336)
..+...++++.+..+...+++.++++.+..+=. ...-+.+.+
T Consensus 31 ~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~--------------------------------------GiG~v~~~l 72 (105)
T PRK11431 31 PSIITVTAMIVSMALLAWAMKSLPVGTAYAVWT--------------------------------------GIGAVGAAI 72 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHH--------------------------------------HHHHHHHHH
Confidence 344456667778888899999999988877661 566777899
Q ss_pred HHHHHhcCcCChhhHHHHHHHhhhheeee
Q 019786 139 ASQFILGQQLPLTLWLSLAPVVIGVSMAS 167 (336)
Q Consensus 139 ~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~ 167 (336)
.+.+++||++++.+++++.+.++|+..+.
T Consensus 73 ig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 73 TGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999998764
No 75
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.37 E-value=0.024 Score=46.05 Aligned_cols=55 Identities=22% Similarity=0.244 Sum_probs=46.5
Q ss_pred hHhhccChh-HHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 268 NTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 268 ~~l~~~s~~-~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
.++++.+.. .+++-.-+..+.+.+.|+++|||++|+.+++|+.++++|+...+..
T Consensus 49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 456777654 4477777889999999999999999999999999999999987654
No 76
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.27 E-value=0.037 Score=44.57 Aligned_cols=54 Identities=20% Similarity=0.231 Sum_probs=46.9
Q ss_pred HhhccCh-hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 269 TLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 269 ~l~~~s~-~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
++|+.+- +.+++-.-.-.+.+.+.|+++|||++|..+++|+.++++|+...+..
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4677765 44588889999999999999999999999999999999999987653
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.19 E-value=0.034 Score=45.09 Aligned_cols=69 Identities=16% Similarity=0.184 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHH
Q 019786 60 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAA 139 (336)
Q Consensus 60 ~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~ 139 (336)
.+...+++..+..+...+++.++++.+..+= ....-+.+++.
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW--------------------------------------~GiG~v~~~~i 79 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALW--------------------------------------GGFGIAATLAA 79 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHH--------------------------------------HHHHHHHHHHH
Confidence 4445566677788888999999998887765 15667778999
Q ss_pred HHHHhcCcCChhhHHHHHHHhhhheee
Q 019786 140 SQFILGQQLPLTLWLSLAPVVIGVSMA 166 (336)
Q Consensus 140 ~~l~l~~~~~~~~~~sl~~~~~Gv~l~ 166 (336)
+.+++||+++..++.++.+.+.|+...
T Consensus 80 g~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 80 GWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999864
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.03 E-value=0.02 Score=46.10 Aligned_cols=72 Identities=19% Similarity=0.197 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHH
Q 019786 59 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAA 138 (336)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~ 138 (336)
..+..-+++..+..+...+++.++++.+..+=. ......+++
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~--------------------------------------GiG~v~~~l 73 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWT--------------------------------------GIGIVGTAL 73 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHH--------------------------------------HHHHHHHHH
Confidence 344555566677888889999999988877651 666777999
Q ss_pred HHHHHhcCcCChhhHHHHHHHhhhheeeec
Q 019786 139 ASQFILGQQLPLTLWLSLAPVVIGVSMASL 168 (336)
Q Consensus 139 ~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~ 168 (336)
.+++++||+.+..+++++.+.++|+.....
T Consensus 74 ~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 74 VGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999987643
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.95 E-value=0.082 Score=42.60 Aligned_cols=54 Identities=15% Similarity=0.122 Sum_probs=46.4
Q ss_pred hHhhccCh-hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 268 NTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 268 ~~l~~~s~-~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
.++|+.+. +.+++-.-+..+.+.+.|+++|||++|+.+++|+.+++.|+...+.
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 34566665 4558888899999999999999999999999999999999988654
No 80
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.78 E-value=0.28 Score=47.70 Aligned_cols=140 Identities=16% Similarity=0.065 Sum_probs=84.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHH-HhhCchhhhccchhhhhhhchHHHHHHH
Q 019786 174 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISDL 252 (336)
Q Consensus 174 ~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (336)
-..|+++++++.+|++...+-.|| .++.| ++...-...+-.-++.|... ....+.. .+.+.+.. ...+...
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f-----~~~~~~~~-~~~~~~~ 76 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETMWSVGGIFSWLILPWLIAALLLPDF-----WAYYSSFS-GSTLLPV 76 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHhcC-HHHHHHH
Confidence 367999999999999999998888 34433 33331111111112222111 1111211 12222122 2344555
Q ss_pred HHHHHHHHHHHHHHHhHhhccChh-HHHHHHHHHHHHHHHHHHHHhCCCC---c----hhhhHHHHHHHHHHHHhhh
Q 019786 253 FWVGMFYHLYNQLATNTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKI---S----TQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 253 ~~~g~~~~~~~~~~~~~l~~~s~~-~~si~~~l~~v~~~i~~~~~fge~~---s----~~~~~G~~li~~gv~~~~~ 321 (336)
++.|++--..|...+.+.++.+-. +..+..-+.-+...+++.+++||=. + ....+|.+++++|+.+..+
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 666776656666666667777643 3356666778888999999998643 2 3456799999999998877
No 81
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.19 E-value=0.13 Score=49.19 Aligned_cols=117 Identities=17% Similarity=0.139 Sum_probs=78.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHH
Q 019786 173 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 252 (336)
Q Consensus 173 ~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (336)
....|..+++.|+++.+....++||...|.+....-.- .++.+. .....+|..+
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~---------------~~~~~~-----------l~~~~W~~G~ 57 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG---------------SGGRSY-----------LRRPLWWIGL 57 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc---------------chhhHH-----------HhhHHHHHHH
Confidence 35789999999999999999999987654332100000 000000 0001122222
Q ss_pred HHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHh
Q 019786 253 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 319 (336)
Q Consensus 253 ~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~ 319 (336)
.. ...+...+. .++...++...+.++.+.-++..+++..+.+|+++...+.|+++++.|..+.
T Consensus 58 ~~-~~~g~~~~~---~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 58 LL-MVLGEILNF---VALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HH-HhcchHHHH---HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 22 222333333 3457778888888899999999999999999999999999999999999754
No 82
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.82 E-value=0.12 Score=40.54 Aligned_cols=59 Identities=17% Similarity=0.245 Sum_probs=35.2
Q ss_pred HHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHH
Q 019786 62 PVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQ 141 (336)
Q Consensus 62 ~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~ 141 (336)
....+++.+..+...++++++++.+..+- . +...+.+.+.+.
T Consensus 34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw---------------------~-----------------g~g~v~~~~~~~ 75 (93)
T PF00893_consen 34 LAVVGYGLSFYFLSLALKKLPLSVAYAVW---------------------T-----------------GLGIVGVTLVGV 75 (93)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHH---------------------H-----------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHH---------------------H-----------------HHHHHHHHHHHH
Confidence 34446778888999999999998887665 0 677888999999
Q ss_pred HHhcCcCChhhHHHHHH
Q 019786 142 FILGQQLPLTLWLSLAP 158 (336)
Q Consensus 142 l~l~~~~~~~~~~sl~~ 158 (336)
+++||++|..++.++.+
T Consensus 76 ~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 76 FFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHH--------HHHHHH
T ss_pred HHhCCCCCHHHHhheee
Confidence 99999999999999875
No 83
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.76 E-value=0.31 Score=41.15 Aligned_cols=118 Identities=17% Similarity=0.177 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhh
Q 019786 9 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 87 (336)
Q Consensus 9 ~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~ 87 (336)
..-+|-.+-++...|+.-++.-+..+.+.+.+.... +.++..+.++.+++ ....|++......+...+...++++.++
T Consensus 16 q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~~ 94 (138)
T PF04657_consen 16 QAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALTT 94 (138)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 344555555555569999999999998876654443 32222222222333 3347888888888899999999998888
Q ss_pred hhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHH----HhcCcCChhhHHHHHHHhhhh
Q 019786 88 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGV 163 (336)
Q Consensus 88 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l----~l~~~~~~~~~~sl~~~~~Gv 163 (336)
... . .-+-+...+++.+ .-|++++++|.+++.++++|+
T Consensus 95 ~l~---------------------~-----------------~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv 136 (138)
T PF04657_consen 95 ILI---------------------V-----------------AGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGV 136 (138)
T ss_pred HHH---------------------H-----------------HHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 776 1 4445556677775 457899999999999999998
Q ss_pred ee
Q 019786 164 SM 165 (336)
Q Consensus 164 ~l 165 (336)
.+
T Consensus 137 ~L 138 (138)
T PF04657_consen 137 IL 138 (138)
T ss_pred hC
Confidence 63
No 84
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=94.39 E-value=0.26 Score=45.74 Aligned_cols=69 Identities=29% Similarity=0.415 Sum_probs=55.3
Q ss_pred HHHHHHHHHHH-HHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHH
Q 019786 57 LKLLIPVAVCH-ALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFF 135 (336)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~ 135 (336)
....+..+++. .+...+...+++..+-+.+.++. +++|.+
T Consensus 209 l~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll---------------------------------------SLePa~ 249 (292)
T COG5006 209 LPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL---------------------------------------SLEPAL 249 (292)
T ss_pred HHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH---------------------------------------HhhHHH
Confidence 33334444443 24556777888888888888888 999999
Q ss_pred HHHHHHHHhcCcCChhhHHHHHHHhhhhe
Q 019786 136 NAAASQFILGQQLPLTLWLSLAPVVIGVS 164 (336)
Q Consensus 136 ~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~ 164 (336)
.++.++++++|++|..||+++..++.+..
T Consensus 250 aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 250 AALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999988887766
No 85
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.11 E-value=3.1 Score=40.38 Aligned_cols=117 Identities=23% Similarity=0.211 Sum_probs=84.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHhhCc--hhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhHhhccChhHHH
Q 019786 202 MDSTNIYAYISIIALFVCIPPAIIVEGP--QLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHA 279 (336)
Q Consensus 202 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~s~~~~s 279 (336)
+.|....+..-..-.+++....+..++. +-...+....+.. .+.-..-+...++++..-|...|.++.+.+|.++.
T Consensus 45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~--~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyq 122 (345)
T KOG2234|consen 45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILA--APRETLKVSVPALIYALQNNLQYVALSNLDAATYQ 122 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHh--ChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhh
Confidence 4577777777777777776665555422 0000111111111 11112234456667777787788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 280 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 280 i~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
+...+|...+.++..++++++++..||...++..+|+....
T Consensus 123 Vt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 123 VTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999877
No 86
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=94.10 E-value=0.36 Score=45.32 Aligned_cols=71 Identities=20% Similarity=0.178 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhH
Q 019786 55 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPF 134 (336)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi 134 (336)
|.-.+-+..|++++.++.+...|.+.++++..-.+. .+.++
T Consensus 193 k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lS---------------------------------------Q~~vv 233 (269)
T PF06800_consen 193 KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLS---------------------------------------QLGVV 233 (269)
T ss_pred cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHH---------------------------------------hHHHH
Confidence 345566888999999999999999999999999998 88999
Q ss_pred HHHHHHHHHhcCcCChhhHH----HHHHHhhhhe
Q 019786 135 FNAAASQFILGQQLPLTLWL----SLAPVVIGVS 164 (336)
Q Consensus 135 ~~~~~~~l~l~~~~~~~~~~----sl~~~~~Gv~ 164 (336)
...+-+.+++||+=+++++. ++++.++|.+
T Consensus 234 IStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 234 ISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 99999999999998888664 5555555554
No 87
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.04 E-value=2.4 Score=36.31 Aligned_cols=136 Identities=9% Similarity=0.113 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCC-hhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHH
Q 019786 175 WTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 253 (336)
Q Consensus 175 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (336)
....+.++.+..+-+...-++.|+.+..+ |..-....+..+.+.+.......++.+... ...+..++.+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~~~~~pwW~~----- 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-----AVASAPWWAW----- 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----hccCCchHHH-----
Confidence 45667888999999999999888887766 666667777777777777666654432211 1112222222
Q ss_pred HHHHHHHHHHHHHHhHhhccChhHHHHHHH-HHHHHHHHHHHH-HhC---CCCchhhhHHHHHHHHHHHHhh
Q 019786 254 WVGMFYHLYNQLATNTLERVAPLTHAVGNV-LKRVFVIGFSIL-AFG---NKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 254 ~~g~~~~~~~~~~~~~l~~~s~~~~si~~~-l~~v~~~i~~~~-~fg---e~~s~~~~~G~~li~~gv~~~~ 320 (336)
+.|+++..+-........|.++.+....-. -.-+.+.+++.+ ++| .+++...++|++++++|+....
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 223443333333344557887776644433 344455555554 333 3589999999999999966544
No 88
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=93.91 E-value=0.088 Score=49.05 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHH
Q 019786 177 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 256 (336)
Q Consensus 177 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 256 (336)
|.+.+++|++++....+=.||. +.-|++-...+.+....+.........+.|.... . ..+.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p------------~-----amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGFPPFYP------------W-----AMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCccee------------H-----HHhhh
Confidence 5678889999998888888876 3457777777766666665555555544443211 1 22333
Q ss_pred HHHHHHHHHHHhHhhccChh-HHHHHHHHHHHHHHHHHHH-HhCCC-----CchhhhHHHHHHHHHHHHhhhhhHH
Q 019786 257 MFYHLYNQLATNTLERVAPL-THAVGNVLKRVFVIGFSIL-AFGNK-----ISTQTGIGTVIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 257 ~~~~~~~~~~~~~l~~~s~~-~~si~~~l~~v~~~i~~~~-~fge~-----~s~~~~~G~~li~~gv~~~~~~~~~ 325 (336)
++-...|....-++++.+-. -..+-+...-+.+-..|-+ +||++ -+..+++|.+++++|..++...|.+
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 33333444444444555432 2234444455555555544 66654 3678899999999999998765544
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=93.46 E-value=0.33 Score=37.96 Aligned_cols=45 Identities=22% Similarity=0.179 Sum_probs=25.1
Q ss_pred hHhhccChhHH-HHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHH
Q 019786 268 NTLERVAPLTH-AVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 312 (336)
Q Consensus 268 ~~l~~~s~~~~-si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li 312 (336)
.++|+.+.... .+..-+..+.+.+.|.++|||++|..+++|+.++
T Consensus 48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 46677765444 6677788999999999999999999999999875
No 90
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=92.17 E-value=0.82 Score=41.17 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHH
Q 019786 62 PVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQ 141 (336)
Q Consensus 62 ~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~ 141 (336)
...++.+.+..+....+++.+....+... .+.++++.+++.
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~---------------------------------------~~~~~~s~lls~ 197 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVT---------------------------------------ALSIILSTLASV 197 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHH---------------------------------------HHHHHHHHHHHH
Confidence 33444555556667777777766555555 899999999999
Q ss_pred HHhcCcCChhhHHHHHHHhhhhee
Q 019786 142 FILGQQLPLTLWLSLAPVVIGVSM 165 (336)
Q Consensus 142 l~l~~~~~~~~~~sl~~~~~Gv~l 165 (336)
++++++++..++.+..+++.|+.+
T Consensus 198 ~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 198 RLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHhcCCccHHHHHHHHHHHeeeEe
Confidence 999999999999999999998764
No 91
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=91.53 E-value=0.58 Score=38.20 Aligned_cols=71 Identities=21% Similarity=0.349 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHH
Q 019786 57 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFN 136 (336)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~ 136 (336)
+++.+|..+- ..+...++..++..++|.+..+.| ++.=+++
T Consensus 42 ~~y~ipf~lN-q~GSv~f~~~L~~~dlSlavPi~N--------------------------------------sl~fvfT 82 (113)
T PF10639_consen 42 PKYIIPFLLN-QSGSVLFFLLLGSADLSLAVPIAN--------------------------------------SLAFVFT 82 (113)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCceeeehHHh--------------------------------------HHHHHHH
Confidence 4555554444 445566778888889988888853 7777889
Q ss_pred HHHHHHHhcCcCChhhHHHHHHHhhhheee
Q 019786 137 AAASQFILGQQLPLTLWLSLAPVVIGVSMA 166 (336)
Q Consensus 137 ~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~ 166 (336)
++.++++.+|..++++++++.+++.|+.+.
T Consensus 83 ~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 83 ALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999988888888999999999999999864
No 92
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=90.85 E-value=0.22 Score=48.51 Aligned_cols=76 Identities=11% Similarity=0.117 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHH
Q 019786 250 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 250 ~~l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~ 325 (336)
...+..|.+-++.|+....++++++.....++......+++.+|.++-+|++|+...++..+.++|+++.+..+.+
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~ 235 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK 235 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc
Confidence 3445667788888999899999999999999999999999999999999999999999999999999988766543
No 93
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.45 E-value=0.22 Score=44.60 Aligned_cols=67 Identities=16% Similarity=0.292 Sum_probs=58.7
Q ss_pred HHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHHHHH
Q 019786 262 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 328 (336)
Q Consensus 262 ~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~~~~ 328 (336)
.|+....++++.+|...+-.......+..+++++++||++....++..++.+-|+.+..|.+++.+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 4556667889999999999999999999999999999999999999999999999888877765543
No 94
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=89.36 E-value=0.15 Score=47.71 Aligned_cols=133 Identities=18% Similarity=0.211 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHH
Q 019786 175 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFW 254 (336)
Q Consensus 175 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (336)
..|..+.-+| ..+....+..++.. +.||.++-......-.....|..++...+-+.+.+ .+-+ ++.
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g------~R~~------LiL 102 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEG------KRKW------LIL 102 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCC------cEEE------EEe
Confidence 4677777777 66666677776664 34555544443222222222222111111111110 0101 122
Q ss_pred HHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 255 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 255 ~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
=|..++..-...|.++++.+-..+++.....|++++++++.+++|+.|....+|..+.+.|+++...
T Consensus 103 Rg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 103 RGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred ehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 2333333333334455666666677777899999999999999999999999999999999987543
No 95
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=88.39 E-value=21 Score=34.69 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHH-hhCchhhhccchhhhhhhchHHHHHHHH
Q 019786 175 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAII-VEGPQLIKHGLSDAISKVGMVKFISDLF 253 (336)
Q Consensus 175 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (336)
..|+++..+++++.+.+.+=.||. |+.+ ++.......+-+.+.+|.... .+-|+.. +.+...+. ..+....
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~-----~i~~~~~~-~~l~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFF-----SIYSATPA-STLFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHH-----HHHHhCCh-hHHHHHH
Confidence 579999999999999988888775 4443 333333333334444455443 2444332 11221111 1222222
Q ss_pred HHHHH----HHHHHHHHHhHhhccC-hhHHHHHHHHHHHHHHHHHHHHhC-------CCCchhhhHHHHHHHHHHHHhhh
Q 019786 254 WVGMF----YHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSILAFG-------NKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 254 ~~g~~----~~~~~~~~~~~l~~~s-~~~~si~~~l~~v~~~i~~~~~fg-------e~~s~~~~~G~~li~~gv~~~~~ 321 (336)
..|++ +..+.. ++|+.+ ++..++.--+..++..++--++-| ++-....++|.++.++|+.+..+
T Consensus 78 l~G~lWGIGgltfGl----~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~ 153 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGL----AMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK 153 (344)
T ss_pred HHHHHHhcchhhHhH----HHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence 22322 222222 234443 233344444444555555444432 22234667899999999998876
Q ss_pred hhHH
Q 019786 322 IKAQ 325 (336)
Q Consensus 322 ~~~~ 325 (336)
....
T Consensus 154 AG~~ 157 (344)
T PF06379_consen 154 AGSM 157 (344)
T ss_pred HHHh
Confidence 5443
No 96
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=82.77 E-value=32 Score=33.08 Aligned_cols=132 Identities=17% Similarity=0.185 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCC-hhh--HHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHH
Q 019786 178 FISAMISNISFTYRSIYSKKAMTDMD-STN--IYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFW 254 (336)
Q Consensus 178 ~l~~l~s~~~~a~~~v~~k~~~~~~~-~~~--l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (336)
...++.-+++.....+.+|-...+.+ |.. +..+++..+.+.+...... +..+++-.+.-...- .+...+++
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~----~lv~~~~l~~~~~kk--~~P~~~lf 87 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL----GLVNFRPLDLRTAKK--WFPVSLLF 87 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh----ceeecCCcChHHHHH--HccHHHHH
Confidence 44445555555666677776666543 333 4447877777766554322 222221111000000 01122233
Q ss_pred HHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 255 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 255 ~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.+ ..+.....+++.+-....+.....++.+.+....+++.+++...+.......+|...+.
T Consensus 88 ~~-----~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 88 VG-----MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HH-----HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 33 33344567899999999999999999999999999999999999999999988887654
No 97
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.27 E-value=13 Score=31.81 Aligned_cols=121 Identities=18% Similarity=0.137 Sum_probs=73.6
Q ss_pred HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhh
Q 019786 9 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 87 (336)
Q Consensus 9 ~~i~nK~~~~~f~~p~~l~~~r~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~ 87 (336)
..-+|-.+-.....|..-++.-+.++...+.. ......++.....++.-++....|++.+.....+......++...++
T Consensus 20 Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~ 99 (150)
T COG3238 20 QAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTI 99 (150)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHH
Confidence 34455555555667899999999998765544 33322222121122322334455566555555666666777776666
Q ss_pred hhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHh----cCcCChhhHHHHHHHhhhh
Q 019786 88 TIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGV 163 (336)
Q Consensus 88 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l----~~~~~~~~~~sl~~~~~Gv 163 (336)
.+- + .-+-+..+++..+=. +++++..+++++++.++|+
T Consensus 100 ~l~---------------------i-----------------~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gi 141 (150)
T COG3238 100 ALV---------------------I-----------------AGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGI 141 (150)
T ss_pred HHH---------------------H-----------------HHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHH
Confidence 554 1 444555666665544 4789999999999999996
Q ss_pred eeee
Q 019786 164 SMAS 167 (336)
Q Consensus 164 ~l~~ 167 (336)
.++.
T Consensus 142 l~~~ 145 (150)
T COG3238 142 LLAR 145 (150)
T ss_pred HHhc
Confidence 5543
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=81.86 E-value=2.6 Score=34.39 Aligned_cols=52 Identities=27% Similarity=0.180 Sum_probs=39.1
Q ss_pred HhHhhccChhHH-HHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHH
Q 019786 267 TNTLERVAPLTH-AVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 318 (336)
Q Consensus 267 ~~~l~~~s~~~~-si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~ 318 (336)
+..+++.+-... =+.|.+.-+++.+.++++.+|..+...++|++++++|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 334555554333 3346777889999998888888899999999999999753
No 99
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=78.79 E-value=20 Score=34.58 Aligned_cols=124 Identities=15% Similarity=0.135 Sum_probs=77.6
Q ss_pred HHHHHHHhhhhcC--CC-hhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 019786 189 TYRSIYSKKAMTD--MD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQL 265 (336)
Q Consensus 189 a~~~v~~k~~~~~--~~-~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 265 (336)
...++++|+.+++ .+ |..++......+.+.+......-..+.. +. +. ...+..++-.|++.......
T Consensus 30 v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~------~~---~~~~~~llpl~~~~~~~~v~ 99 (316)
T KOG1441|consen 30 VGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KI------SS---KLPLRTLLPLGLVFCISHVL 99 (316)
T ss_pred eeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-cc------cc---ccchHHHHHHHHHHHHHHHh
Confidence 3445567777774 32 5555555444444444433322222211 10 00 11233444556665556666
Q ss_pred HHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCch----------------------hhhHHHHHHHHHHHHhhhh
Q 019786 266 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKIST----------------------QTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 266 ~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~----------------------~~~~G~~li~~gv~~~~~~ 322 (336)
...++++.+....-+...++|+++.+++.++.+|+.+. .++.|.+..+++.+....+
T Consensus 100 ~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~ 178 (316)
T KOG1441|consen 100 GNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALR 178 (316)
T ss_pred cchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHH
Confidence 66778999999999999999999999999999999765 5677777777777655443
No 100
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=77.79 E-value=1.5 Score=40.62 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHH
Q 019786 27 SVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFIL 106 (336)
Q Consensus 27 ~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~ 106 (336)
..+.+.++.+...+..- ..+..+..+|....-+..|+..+.++.+...|-+..+++..-.++
T Consensus 181 aiLPqAiGMv~~ali~~--~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlS---------------- 242 (288)
T COG4975 181 AILPQAIGMVIGALILG--FFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLS---------------- 242 (288)
T ss_pred hhhHHHHHHHHHHHHHh--hcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHh----------------
Confidence 34455666555444332 222223334556667788899999999999999988887777776
Q ss_pred HHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHH----HHHHHhhhhee
Q 019786 107 SMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGVSM 165 (336)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~----sl~~~~~Gv~l 165 (336)
.+..+...+-+.+++|||=|++++. ++++.++|..+
T Consensus 243 -----------------------QlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 243 -----------------------QLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred -----------------------hheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 6777778888999999999999875 44444555443
No 101
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=75.20 E-value=7.6 Score=35.93 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhH
Q 019786 55 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPF 134 (336)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi 134 (336)
..+..+...+++.+++.++-+.-..+.+.-.-+++. .+--+
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivT---------------------------------------TTRKf 279 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVT---------------------------------------TTRKF 279 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEe---------------------------------------ehHHH
Confidence 446667777888888777777666666665555555 67789
Q ss_pred HHHHHHHHHhcCcCChhhHHHHHHHhhhheee
Q 019786 135 FNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 166 (336)
Q Consensus 135 ~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~ 166 (336)
|+.+.+.++++..++.+||++-.+.+.|...-
T Consensus 280 FTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 280 FTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999887753
No 102
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.45 E-value=3.1 Score=39.98 Aligned_cols=118 Identities=15% Similarity=0.088 Sum_probs=77.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHH
Q 019786 172 SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISD 251 (336)
Q Consensus 172 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (336)
+.+..|..++..|.+......++.||-..|... .+.+..+++..- .. .+.|..
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----------------------~~~ra~~gg~~y----l~-~~~Ww~ 69 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----------------------SGLRAGEGGYGY----LK-EPLWWA 69 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh----------------------hcccccCCCcch----hh-hHHHHH
Confidence 345778888888888887777777776554221 000111111110 00 122323
Q ss_pred HHHHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHh
Q 019786 252 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 319 (336)
Q Consensus 252 l~~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~ 319 (336)
-++.-..+-..|+.+| ...++.....++.+.-+...+++..+.+|+++....+|+++.++|....
T Consensus 70 G~ltm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 3333344555566555 6667777788888999999999999999999999999999999998653
No 103
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=60.59 E-value=1.3e+02 Score=27.92 Aligned_cols=62 Identities=11% Similarity=0.176 Sum_probs=49.4
Q ss_pred HHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHHH
Q 019786 265 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 326 (336)
Q Consensus 265 ~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~~ 326 (336)
..-+++++.+...+.+.-.+..+........+||.+.+........+.+.....-+..+.+.
T Consensus 84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~ 145 (309)
T COG5070 84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQA 145 (309)
T ss_pred hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhH
Confidence 34456777777777787777777888888899999999999999999988888777665543
No 104
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=60.54 E-value=1.1e+02 Score=29.36 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=82.9
Q ss_pred HHHHHHHHHhhhhcC-C--------ChhhHHHHHHHHHHHHHHHHHHHhhCchhhhccchhhhhhhchHHHHHHHHHHHH
Q 019786 187 SFTYRSIYSKKAMTD-M--------DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 257 (336)
Q Consensus 187 ~~a~~~v~~k~~~~~-~--------~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 257 (336)
.+-.+.++++|++++ + ++.-+...+...+.++... .+....... +...++... ...+.
T Consensus 25 t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~--~l~~~k~~~--------~~~apl~~y---~~is~ 91 (327)
T KOG1581|consen 25 TFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYA--MLKWWKKEL--------SGVAPLYKY---SLISF 91 (327)
T ss_pred HHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHH--HHhcccccC--------CCCCchhHH---hHHHH
Confidence 345567778887743 2 3555666666666655522 222211111 111111111 22333
Q ss_pred HHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhhhHH
Q 019786 258 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 325 (336)
Q Consensus 258 ~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~~~~ 325 (336)
.......+.+-+++++|=.+..+.-..|-+-+.+++.++.+.+.+....+-..++-.|+.++...++.
T Consensus 92 tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s 159 (327)
T KOG1581|consen 92 TNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNS 159 (327)
T ss_pred HhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCC
Confidence 34444455577889999999999999999999999999999999999999999999999888776543
No 105
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=53.61 E-value=37 Score=32.38 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=45.2
Q ss_pred HhhccChhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhh
Q 019786 269 TLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 320 (336)
Q Consensus 269 ~l~~~s~~~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~ 320 (336)
.+..+++....+..-...+++-+++..+++.+++..||+|+..+.+|+....
T Consensus 106 gL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 106 GLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 3456678888888888889999999999999999999999999999998654
No 106
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi. There are homologs of this protein found in both Gram-positive and Gram-negative bacteria. In E. chrysanthemi, a phytopathogenic bacterium, degraded pectin products from plant cell walls are transported by 2-keto-3-deoxygluconate permease into the bacterial cell to provide a carbon and energy source []. 2-keto-3-deoxygluconate permease can mediate the uptake of glucuronate with a low affinity [].; GO: 0015649 2-keto-3-deoxygluconate:hydrogen symporter activity, 0008643 carbohydrate transport, 0046411 2-keto-3-deoxygluconate transport, 0016021 integral to membrane
Probab=50.07 E-value=2.4e+02 Score=27.18 Aligned_cols=136 Identities=17% Similarity=0.185 Sum_probs=82.3
Q ss_pred hhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhH
Q 019786 74 SNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLW 153 (336)
Q Consensus 74 ~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~ 153 (336)
...++...+-+.|..+.+|.=+..|+|.-.+. . + ...|+++++.--.---..+++...
T Consensus 114 iiaa~~~~NggLY~aL~~~yGd~~D~gA~~i~------s------l----------~~GPf~tMl~LG~sG~a~ip~~~l 171 (314)
T PF03812_consen 114 IIAAMTNSNGGLYLALMGQYGDEEDVGAFSIL------S------L----------NDGPFFTMLALGASGLANIPWMSL 171 (314)
T ss_pred HHHHHhcCCHHHHHHHHHHhCCHHHhHHHHHH------H------h----------hhhHHHHHHHHhhccccCCCHHHH
Confidence 33455666777777777544444455422221 1 1 567998887544333357888876
Q ss_pred H-HHHHHhhhheeeecccc------------------------c------ccHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 019786 154 L-SLAPVVIGVSMASLTEL------------------------S------FNWTGFISAMISNISFTYRSIYSKKAMTDM 202 (336)
Q Consensus 154 ~-sl~~~~~Gv~l~~~~~~------------------------~------~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~ 202 (336)
+ .++..++|..+-..|+. + -...|+++++...+....-..+..|...+-
T Consensus 172 v~~llP~iiG~iLGNLD~~~r~fl~~~~~~lIPF~~f~lGa~inl~~i~~aGl~GIlLgv~~~~vtg~~~~~~dr~i~~~ 251 (314)
T PF03812_consen 172 VAALLPIIIGMILGNLDPDFRKFLAPGVPILIPFFGFALGAGINLSNIIKAGLSGILLGVIVVVVTGIPLYLADRLILKG 251 (314)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHhcCCCeeeehhhhhhcCCCCHHHHHHhCcchHHHHHHHHHHHhHHHHHHHHHHcCC
Confidence 5 77889999998755430 0 125677777777666666566666664444
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhhCchh
Q 019786 203 DSTNIYAYISIIALFVCIPPAIIVEGPQL 231 (336)
Q Consensus 203 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~ 231 (336)
+...-....+..+.-...|.+...-.|++
T Consensus 252 ~g~aG~A~sstAGnavatPaaiA~~dP~~ 280 (314)
T PF03812_consen 252 NGVAGAAISSTAGNAVATPAAIAAADPSF 280 (314)
T ss_pred CCceeehHHhhhhhhhhhhHHHHHhChhh
Confidence 55555555666666777787766655544
No 107
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=42.15 E-value=37 Score=27.38 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=0.0
Q ss_pred HHHHHHHhCCCCchhhhHHHHHHHHHHH
Q 019786 290 IGFSILAFGNKISTQTGIGTVIAIAGVA 317 (336)
Q Consensus 290 ~i~~~~~fge~~s~~~~~G~~li~~gv~ 317 (336)
..++.++++|+++++...|.++++.++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhh
No 108
>COG4147 DhlC Predicted symporter [General function prediction only]
Probab=40.70 E-value=1.6e+02 Score=30.15 Aligned_cols=71 Identities=11% Similarity=0.048 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHh------------CCCCchhhhHHHHHHHHHHHHhhh
Q 019786 254 WVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF------------GNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 254 ~~g~~~~~~~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~f------------ge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
.++.+..+.--..++=..+.++......+....+.-++.+-... +-+++..+..|+.+-+.+..+.+.
T Consensus 427 aSa~fPvivlglfWKr~n~~GAi~G~~~GL~~tlv~i~l~~~i~~~~~~~~~~~~~~~~~~~~g~~sipv~F~~~~ivSl 506 (529)
T COG4147 427 ASANFPVIVLGLFWKRLNTAGAIAGMLLGLIVTLVLIILSPTIWVVILGHPGFGWAGFPYEGPGLFSIPVGFLGAWIVSL 506 (529)
T ss_pred HHcccchhhHHHHHhhccHHhHHHHHHHHHHHHHHHHHhCccccccccCccccccccCCCCCcchhhhhHHHHHhHheec
Confidence 34444333333345555666777777777777777776665333 345788889999999999988876
Q ss_pred hhH
Q 019786 322 IKA 324 (336)
Q Consensus 322 ~~~ 324 (336)
..+
T Consensus 507 lt~ 509 (529)
T COG4147 507 LTK 509 (529)
T ss_pred cCC
Confidence 543
No 109
>PRK02237 hypothetical protein; Provisional
Probab=39.77 E-value=72 Score=25.83 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhh
Q 019786 277 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 277 ~~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
.++..+-.-.+.++++++.+-|++|+...++|.++.++|+.+..+
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 346667778888999999999999999999999999999976543
No 110
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=38.05 E-value=4.7e+02 Score=26.94 Aligned_cols=26 Identities=19% Similarity=-0.032 Sum_probs=14.2
Q ss_pred hccChhHHHHHHHHHHHHHHHHHHHH
Q 019786 271 ERVAPLTHAVGNVLKRVFVIGFSILA 296 (336)
Q Consensus 271 ~~~s~~~~si~~~l~~v~~~i~~~~~ 296 (336)
.|..+....+.....++-..+.|.+.
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444455555666666667654
No 111
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=36.97 E-value=39 Score=26.06 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=23.8
Q ss_pred CCchhhhHHHHHHHHHHHHhhhhhHHHHHHH
Q 019786 300 KISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 330 (336)
Q Consensus 300 ~~s~~~~~G~~li~~gv~~~~~~~~~~~~~~ 330 (336)
..++.+++|+.++++|..+|..++.+++-.|
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev~R 34 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPEVSR 34 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcchhh
Confidence 4688899999999999999986655544433
No 112
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=36.95 E-value=4.1e+02 Score=25.98 Aligned_cols=235 Identities=16% Similarity=0.177 Sum_probs=121.1
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchh
Q 019786 53 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALE 132 (336)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (336)
+.+........|++.+.+..++-.+.+|++++..+.+. +|.....= .+.
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~---------------lGl~~~~G----------------Tli 117 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIA---------------LGLCAVFG----------------TLI 117 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHH---------------HHHHHHHh----------------hch
Confidence 44566677788888898999999999999998877766 33333330 222
Q ss_pred -hHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeecc----c-------cccc-HHHHHHHHHHHHHHHHHHHHHhhhh
Q 019786 133 -PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT----E-------LSFN-WTGFISAMISNISFTYRSIYSKKAM 199 (336)
Q Consensus 133 -Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~----~-------~~~~-~~G~l~~l~s~~~~a~~~v~~k~~~ 199 (336)
|++.--.+. .+.++-....+++++++++|+.+.... | .++| -.|.+.+++|.+..|..+.-...-.
T Consensus 118 ppi~~g~~~~-l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~ 196 (344)
T PF06379_consen 118 PPIFQGTFDE-LLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGK 196 (344)
T ss_pred HHHHcCcccc-cccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCC
Confidence 222100010 122233445678999999999987421 1 1233 5899999999998888887654322
Q ss_pred c--------CCChh----hHHHHHHHHHHHHHHHHHHHhhC--chh-hhccchhhhhhhchHHHHHHHHHHHHHHHHH--
Q 019786 200 T--------DMDST----NIYAYISIIALFVCIPPAIIVEG--PQL-IKHGLSDAISKVGMVKFISDLFWVGMFYHLY-- 262 (336)
Q Consensus 200 ~--------~~~~~----~l~~~~~~~~~~~l~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-- 262 (336)
+ ..+|+ ........-+.+.-+...+.... ... .+.+... .+.....=+....+.|.+-+..
T Consensus 197 pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~--~~~~~~~N~~~~aLaG~lWy~qff 274 (344)
T PF06379_consen 197 PIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSV--AKPPLLKNYLFCALAGVLWYSQFF 274 (344)
T ss_pred cHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCcccccccc--ccchhHHHHHHHHHHHHHHHHHHH
Confidence 1 12332 12222333444444555444311 111 0000100 0000111112222333332211
Q ss_pred --HHHHHhHhhccChhHHHHHHHHHHHHHHHHHHHHh-----CCCCchhhhHHHHHHHHHHHHhhh
Q 019786 263 --NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF-----GNKISTQTGIGTVIAIAGVAAYSY 321 (336)
Q Consensus 263 --~~~~~~~l~~~s~~~~si~~~l~~v~~~i~~~~~f-----ge~~s~~~~~G~~li~~gv~~~~~ 321 (336)
.....+.-.+-+.....+...+.-+++-+.+...= +++.-..-+.|+++++.++.+..+
T Consensus 275 fYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 275 FYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLILKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 11111122233345556666677777777776542 122334446788888888876554
No 113
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter. This family includes the characterized 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi. There are homologs of this protein found in both gram-positive and gram-negative bacteria.
Probab=36.51 E-value=4e+02 Score=25.69 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=79.7
Q ss_pred hhccccchhhhhhhccccccccccCchhHHHHHHHHhhhhhhhhHHHHHhhhhcchhhHHHHHHHHHHhcCcCChhhHH-
Q 019786 76 VSFAAVAVSFTHTIKGEIWHYADQGENHFILSMSLLLYTSQLNLFFIYWFYFFSALEPFFNAAASQFILGQQLPLTLWL- 154 (336)
Q Consensus 76 ~sl~~~~vs~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~~~~~~l~l~~~~~~~~~~- 154 (336)
.+....+-+.|..+.++.=+..|+|.-.+. + + ...|+++++.-=.---..+++...+
T Consensus 116 aA~~nsNggLY~aL~~qyGd~~D~gA~~i~---s---------l----------~~GPf~TMi~LG~sGlA~ip~~~lv~ 173 (314)
T TIGR00793 116 AAMDMTNGGLYASIMQQYGTKEEAGAFVLM---S---------L----------ESGPLMTMVILGTAGIASFEPHVFVG 173 (314)
T ss_pred HHHhCCcHHHHHHHHHHcCCHhhhhhhhhh---h---------h----------ccCcHHHHHHHhhccCCCCCHHHHHH
Confidence 344555666666666554455555532222 0 0 4459988876433323356666554
Q ss_pred HHHHHhhhheeeeccc------------------------ccc------cHHHHHHHHHHHHHHHHHHHHHhhhhcCCCh
Q 019786 155 SLAPVVIGVSMASLTE------------------------LSF------NWTGFISAMISNISFTYRSIYSKKAMTDMDS 204 (336)
Q Consensus 155 sl~~~~~Gv~l~~~~~------------------------~~~------~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~ 204 (336)
+++..++|..+-..|+ .++ ...|+++.+...+....-..+..|+..+-++
T Consensus 174 ~ilPlliG~ilGNLD~~~r~fl~~~~~~lIpFf~FaLGaginl~~i~~aGl~GIlLGl~v~~vtG~~~~~~dr~~~g~~g 253 (314)
T TIGR00793 174 AVLPFLVGFALGNLDPELRDFFSKAVQTLIPFFAFALGNTIDLGVIIQTGLLGILLGVSVIILTGIPLILADKFIGGGDG 253 (314)
T ss_pred HHHHHHHHHHHhcCCHHHHHHhccCCCeeeehhhhhhcCCCCHHHHHHhCcchHHHHHHHHHHHhHHHHHHHHHhcCCCC
Confidence 7888999999865543 011 1457777777776666666676676655455
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhCchh
Q 019786 205 TNIYAYISIIALFVCIPPAIIVEGPQL 231 (336)
Q Consensus 205 ~~l~~~~~~~~~~~l~~~~~~~~~~~~ 231 (336)
..-..-.+..+.....|.+.....|++
T Consensus 254 ~aG~A~sstAGnAvatPaavA~adPs~ 280 (314)
T TIGR00793 254 TAGIAASSSAGAAVATPVLIAEMVPAF 280 (314)
T ss_pred chhhHHHHHHHHhhhhHHHHHHhChhh
Confidence 555555566666777777666555544
No 114
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.18 E-value=75 Score=25.65 Aligned_cols=45 Identities=22% Similarity=0.148 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhhHHHHHHHHHHHHhhhh
Q 019786 278 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 322 (336)
Q Consensus 278 ~si~~~l~~v~~~i~~~~~fge~~s~~~~~G~~li~~gv~~~~~~ 322 (336)
++..+-.-.+.++++++.+-|++|+...++|..+.+.|+.+..+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 466677888999999999999999999999999999999875543
No 115
>PRK02237 hypothetical protein; Provisional
Probab=35.89 E-value=41 Score=27.17 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=32.1
Q ss_pred chhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeecc
Q 019786 130 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 169 (336)
Q Consensus 130 ~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~ 169 (336)
........+-.+.+-|+||++..+++..++++|+.++...
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 4444555567888899999999999999999999877543
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=35.12 E-value=42 Score=27.09 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=32.9
Q ss_pred chhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeecc
Q 019786 130 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 169 (336)
Q Consensus 130 ~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~ 169 (336)
........+-.+.+-|+||++..+++..++++|+.++...
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 4445556667888899999999999999999999987654
No 117
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=30.85 E-value=79 Score=25.44 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=32.5
Q ss_pred chhhHHHHHHHHHHhcCcCChhhHHHHHHHhhhheeeeccc
Q 019786 130 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 170 (336)
Q Consensus 130 ~~~Pi~~~~~~~l~l~~~~~~~~~~sl~~~~~Gv~l~~~~~ 170 (336)
........+-.++.-|.||++..+.+..++++|+.++...+
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 44455555667778899999999999999999999876543
No 118
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=24.41 E-value=1.7e+02 Score=25.62 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCcCChhhHHHHHH-------HhhhheeeecccccccHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019786 136 NAAASQFILGQQLPLTLWLSLAP-------VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 199 (336)
Q Consensus 136 ~~~~~~l~l~~~~~~~~~~sl~~-------~~~Gv~l~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~ 199 (336)
+=..+.++.|..|+.-+.+++.+ .+.|+.+....+...-.-....++.+++++++..++.....
T Consensus 85 VQf~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~iR 155 (193)
T COG4657 85 VQFTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAIR 155 (193)
T ss_pred HHHHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence 33456677888888888888765 45566666554443334566777788888888777754443
No 119
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=24.32 E-value=7.2e+02 Score=24.80 Aligned_cols=61 Identities=11% Similarity=0.155 Sum_probs=31.2
Q ss_pred chhhHHHHHHHHHH---hcCcCChhhHH--HHHHHhhhheeeecccccccHHHH-HHHHHHHHHHHHHHHH
Q 019786 130 ALEPFFNAAASQFI---LGQQLPLTLWL--SLAPVVIGVSMASLTELSFNWTGF-ISAMISNISFTYRSIY 194 (336)
Q Consensus 130 ~~~Pi~~~~~~~l~---l~~~~~~~~~~--sl~~~~~Gv~l~~~~~~~~~~~G~-l~~l~s~~~~a~~~v~ 194 (336)
.+.|+...-.-..+ ++||++..+.+ ++.+..+|..+=+... ..+. .-.++...+-++.|++
T Consensus 53 TtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~----~~~L~~gt~l~G~gIav~nVL 119 (395)
T COG2807 53 TTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGG----LPLLFLGTLLAGAGIAVINVL 119 (395)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhccc----HHHHHHHHHHHHhhHHHHHHh
Confidence 66677555443333 45666666554 6666666666544332 2222 2233444555666655
No 120
>PRK10655 potE putrescine transporter; Provisional
Probab=24.14 E-value=6.9e+02 Score=24.51 Aligned_cols=23 Identities=17% Similarity=0.405 Sum_probs=16.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhHHH
Q 019786 304 QTGIGTVIAIAGVAAYSYIKAQM 326 (336)
Q Consensus 304 ~~~~G~~li~~gv~~~~~~~~~~ 326 (336)
....|..+.+.|...|...+++.
T Consensus 409 ~~~~~~~~~~~g~~~y~~~~~~~ 431 (438)
T PRK10655 409 AMLYGSIVTFLGWTLYGLISPRF 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34568888889999987654443
No 121
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.41 E-value=8.6e+02 Score=28.40 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=19.0
Q ss_pred HHHHHhhhhcchhhHHHHHHHHHHhcCc
Q 019786 120 FFIYWFYFFSALEPFFNAAASQFILGQQ 147 (336)
Q Consensus 120 ~~~~~~~~~~~~~Pi~~~~~~~l~l~~~ 147 (336)
++..+||+.-...|++.....+.+++++
T Consensus 74 ~L~~LFGl~AYLLP~LL~~~a~~l~R~r 101 (1355)
T PRK10263 74 TLFFIFGVMAYTIPVIIVGGCWFAWRHQ 101 (1355)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhcc
Confidence 3455778777888877766677766544
No 122
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=20.03 E-value=1.2e+02 Score=20.61 Aligned_cols=20 Identities=10% Similarity=0.308 Sum_probs=14.9
Q ss_pred HHHHHHHHHHhhhhhHHHHH
Q 019786 309 TVIAIAGVAAYSYIKAQMEE 328 (336)
Q Consensus 309 ~~li~~gv~~~~~~~~~~~~ 328 (336)
..+.++|+++|.+.+.++++
T Consensus 19 ~~~~Figiv~wa~~p~~k~~ 38 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKA 38 (48)
T ss_pred HHHHHHHHHHHHhCCCcchh
Confidence 46788999999987655443
Done!