BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019790
(335 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 283 bits (725), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 152/325 (46%), Positives = 200/325 (61%), Gaps = 12/325 (3%)
Query: 10 GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTI 69
G P+V + + P + EVL++ EA +NR D QR+GSYPPPK ASP GLE SG I
Sbjct: 38 GGPDVXVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEI 97
Query: 70 LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129
+ VG VS + VGD+VC L GG YAE +PAGQ+LP P G AAA PE TVW+
Sbjct: 98 VGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWA 157
Query: 130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 189
+F + L+ GES L +HGG+SGIGT AIQ+ + G V+ TAGS K
Sbjct: 158 NLFQXAGLTEGESVL----------IHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA 207
Query: 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 249
C+ LGA INY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL DG L II
Sbjct: 208 CERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDXIGAAYFERNIASLAKDGCLSIIAF 266
Query: 250 QGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 308
GGA E +N++ + KRLTV + R R+ E K I ++ VWP + G V PVI+K
Sbjct: 267 LGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326
Query: 309 YLPLCEAAEAHQLMESSQHIGKIML 333
+ A+AH+L+E H+GK+ L
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVXL 351
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 198/338 (58%), Gaps = 15/338 (4%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 23 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 83 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
PE W T F HL + + + Y +H G SG+GT AIQ+ + G V
Sbjct: 143 IPEA----WLTAFQLLHL------VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 192
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
TAGS++KL + + LGA NYK EDF + T G GV++ILDC+G SY+++N+ L
Sbjct: 193 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 252
Query: 240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
+DGR + G GG + S L KR ++ + LRSR + K ++V+ + + P +
Sbjct: 253 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 312
Query: 299 V---GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
++ PV+ + P+ E EAH+ ME++++IGKI+L
Sbjct: 313 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 350
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 198/338 (58%), Gaps = 15/338 (4%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M A+ +PG PE L ++EV P + EVL+KV A+ALNRAD +QR+G Y PP GAS
Sbjct: 7 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 66
Query: 61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
GLE SG + +G WK+GD ALL GGG A+ V VP G ++P+P G++L AAA
Sbjct: 67 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 126
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
PE W T F HL + + + Y +H G SG+GT AIQ+ + G V
Sbjct: 127 IPEA----WLTAFQLLHL------VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 176
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
TAGS++KL + + LGA NYK EDF + T G GV++ILDC+G SY+++N+ L
Sbjct: 177 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 236
Query: 240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
+DGR + G GG + S L KR ++ + LRSR + K ++V+ + + P +
Sbjct: 237 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 296
Query: 299 V---GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
++ PV+ + P+ E EAH+ ME++++IGKI+L
Sbjct: 297 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 334
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 173/360 (48%), Gaps = 47/360 (13%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ G PEVL++ ++ P+ EV ++++A ALN D RKG P
Sbjct: 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG---GGG 93
G + SG + +VG V + GD+V +LG G
Sbjct: 61 LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153
YAE V +P + P P +S ++AAA P T W V + PG+ LV
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLV-------- 172
Query: 154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213
SG+ AIQ+ K G RV TAGSE+KL K LGAD +NY D+ V+
Sbjct: 173 --MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL 230
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
TGGKG D ++D GA YF+ + + GR+ I G G + L +F ++L++ +
Sbjct: 231 TGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGST 290
Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
+ S+S I+ VE+ GK+KPV+ + LPL AAE H+L+E + GK++L
Sbjct: 291 MASKSRLFP--ILRFVEE--------GKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVL 340
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 173/338 (51%), Gaps = 21/338 (6%)
Query: 1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
M+A+ + + G PEVL+L+ ++ P KD +VLIKV A +N +T R G+Y K P
Sbjct: 30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 88
Query: 60 Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
Y PG + +G I +VG N S +K GD+V + GGYAE V +P + K
Sbjct: 89 YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 148
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
AA T + + ++ + GES LV HG S G+G A Q+ + G+++
Sbjct: 149 AAIGIPYFTAYRALIHSACVKAGESVLV----------HGASGGVGLAACQIARAYGLKI 198
Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
TAG+EE + GA N++ +++ ++K+ G KG+D+I++ + ++L
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 258
Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
L+ GR+ ++G++G E+N AK ++ L S + E + + +
Sbjct: 259 LSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSSTKEE----FQQYAAALQAGM 312
Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
+G +KPVI PL + AEAH+ ++ S GK++L+
Sbjct: 313 EIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL 350
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 158/337 (46%), Gaps = 19/337 (5%)
Query: 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
I + G PEVLQ E ++E+ ++ +A +N DT R G YPPP S G
Sbjct: 5 IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGL-GT 63
Query: 64 ECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
E +G + VG V K GD+V A G Y+ + A + +P+ +S + AAA
Sbjct: 64 EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182
TV+ + T + P E FL H + G+G A Q K G ++ T G
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLF----------HAAAGGVGLIACQWAKALGAKLIGTVG 173
Query: 183 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 242
+ +K GA INY+ ED V R+KE TGGK V V+ D +G ++R+L L G
Sbjct: 174 TAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 233
Query: 243 RLFIIGTQGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 301
+ G GA T +N+ L K L V L+ T + L +E ++ IA G
Sbjct: 234 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEASNELFSLIASGV 291
Query: 302 VKPVI---YKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
+K + KY PL +A AH+++ES G +L+P
Sbjct: 292 IKVDVAEQQKY-PLKDAQRAHEILESRATQGSSLLIP 327
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 153/345 (44%), Gaps = 29/345 (8%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYPPPKGASPYP 61
A VI + G P+ +EV+ +V ++ A +N DT R G +P G P
Sbjct: 4 AAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIV 63
Query: 62 -GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA-- 117
G E + + VG V+ + VG++VC L G Y+++ PA +++ VP + L D
Sbjct: 64 VGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHL 123
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
A T + T + PG+ L+ H + G+G + + G V
Sbjct: 124 AGLMLKGMTAQYLLHQTHKVKPGDYVLI----------HAAAGGMGHIMVPWARHLGATV 173
Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
T +EEK + LG INY T+DF V+E TGGKGVDV+ D +G Q++L
Sbjct: 174 IGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDC 233
Query: 238 LNIDGRLFIIGTQGGAKTELNIT-------SLFAKRLTVQAAGLRSRSTENKALIVSEVE 290
L G G G + + SLF R + + +RS + E
Sbjct: 234 LRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHY-MSNRSE------IDEGS 286
Query: 291 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
K ++ A+ G + + K PL EAA AH+ M Q IG I+L+P
Sbjct: 287 KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 163/340 (47%), Gaps = 27/340 (7%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
K I+I + G +V++ ++ P I ++E+LIK + T +N ++ RKG YP K PY
Sbjct: 10 KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYV 66
Query: 62 -GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVSLKDAAA 119
G E SGT+++ GK V+ ++VGDQV A + +A+ + + G V+ +P G S ++
Sbjct: 67 LGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 120 FPEVACTVWSTVFMTS---HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
+ V + + T+ H+ G+ L+ + G+G Q+ K +G
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLL----------FAAAGGVGLILNQLLKMKGAH 175
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
A ++EKL + K+ GA+ IN ED + +V + T GKGVD D +G F+ +L
Sbjct: 176 TIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLA 235
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV---QAAGLRSRSTENKALIVSEVEKNV 293
+L G G G +IT L K +T+ Q G + E K
Sbjct: 236 ALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYY-----SDEF 290
Query: 294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
+ + K+ IYK PL + A +ES + +GK++L
Sbjct: 291 FGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVL 330
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 154/335 (45%), Gaps = 13/335 (3%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
K I + G PEVL+ + E V+++ +A LN DT R G YP P S
Sbjct: 3 KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGL- 61
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
G E +G + +VG V+R+KVGD+V G G Y+E +P ++ + VS + AAA
Sbjct: 62 GAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAAL 121
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
TV + T + PGE L H + G+G+ A Q K G ++ T
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILF----------HAAAGGVGSLACQWAKALGAKLIGT 171
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
S EK A K LGA I+Y ED RV E T GK V+ D +G + +L S+
Sbjct: 172 VSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAP 231
Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
G + G G + +N+ + A++ +V S N A + + ++ +A G
Sbjct: 232 RGLVVSFGNASGPVSGVNL-GILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASG 290
Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
K+K + L +AA+A + + + G +L+P
Sbjct: 291 KLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 154/352 (43%), Gaps = 34/352 (9%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+V+ G L+L P+ +D E+ I+V+A LN D + R+G+ P
Sbjct: 4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG ECSG + ++G +V +++GD+V A + +AE V P V +P +S +AAAF
Sbjct: 64 PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQM-GKCQGVRVFV 179
P T + +F ++L G S L VH G+G Q+ V VF
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVL----------VHSAGGGVGQAVAQLCSTVPNVTVFG 173
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
TA + + A+ KD + + + D+V VK +GVD++LDC+ + L L
Sbjct: 174 TASTFKHEAI-KD--SVTHLFDRNADYVQEVK-RISAEGVDIVLDCLCGDNTGKGLSLLK 229
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKA--------------- 283
G + G+ E FAK V+ ENK
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGR 289
Query: 284 --LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
LI VEK + K+KPV+ L E EA Q + +IGK++L
Sbjct: 290 AGLIRGVVEKLI-GLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 154/333 (46%), Gaps = 35/333 (10%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E G + G + AL+ GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59 PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
P T + + PGE LV + + T A+Q+ + G+RV
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALG----------TAAVQVARAMGLRVLAA 156
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLN 239
A EKLA+ LGA+ Y A V E G+D++L+ G + +LG L
Sbjct: 157 ASRPEKLALPLALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLA 209
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
GRL IG G + L + L V L E +V E + P +
Sbjct: 210 HGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG- 266
Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 332
+++PV+ P EA A + + H GK++
Sbjct: 267 RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVV 299
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 50/337 (14%)
Query: 7 TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECS 66
T+ +P L+L E P+ + +++++ A +LN D L + P + S
Sbjct: 33 TETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXS 92
Query: 67 GTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAEKVAVPA 102
G + +VGK+V+R++ GD+V + LGG G +E V +P
Sbjct: 93 GVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPE 152
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI 162
G + P + +A+ P T W + HL G+ +V G+ G+
Sbjct: 153 GWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-----------GTGGV 201
Query: 163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 222
F +Q+ K G V VT+ S EKL LGAD IN ED+V RV TG +G D I
Sbjct: 202 ALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261
Query: 223 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL-RSRSTEN 281
L+ G + ++L ++ DGR+ +IG G + + L K VQ + R+ E+
Sbjct: 262 LEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALED 321
Query: 282 KALIVSEVEKNVWPAIAVGKVKPVI---YKYLPLCEA 315
+V V++ +KPVI YK+ + EA
Sbjct: 322 ---LVGAVDRL--------GLKPVIDXRYKFTEVPEA 347
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 151/333 (45%), Gaps = 42/333 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG+E G + G + AL+ GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59 PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
P T + + PGE LV + + T A+Q+ + G+RV
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALG----------TAAVQVARAMGLRVLAA 156
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLN 239
A EKLA+ LGA+ Y A V E G+D++L+ G + +LG L
Sbjct: 157 ASRPEKLALPLALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLA 209
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
GRL I I L R + G + +V E + P +
Sbjct: 210 HGGRLVYIAP---------IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG- 259
Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 332
+++PV+ P EA A + + H GK++
Sbjct: 260 RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVV 292
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 149/336 (44%), Gaps = 16/336 (4%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKAI PE L +VE P + V++ V+A + D L KG Y K P+
Sbjct: 22 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL-KMEPPF 80
Query: 61 -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
PG+E +G + S + S K GD+V A GGYAE+VAV +LP P + +A A
Sbjct: 81 VPGIETAGVVRSAPEG-SGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVA 139
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
T++ L GE+ LV + T AIQ+ K G +V
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIG----------TAAIQIAKGMGAKVIA 189
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
K +GAD+ + + E + V+E TGG GVD+++D +G F + +L
Sbjct: 190 VVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLA 248
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
+GRL ++G G + + L + ++ A + E + + +A
Sbjct: 249 SEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAW-GEFLRTHADYLYETQAGLEKLVAE 307
Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
G ++P + +PL E +A Q + GK++LVP
Sbjct: 308 G-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 39/341 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPPPKGASPY 60
KAI Q G P+VL+L + P+ + ++ LIKV A +LN D R GS + K +
Sbjct: 8 KAIQFDQFGPPKVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVCALLGGGG----YAEKVAVPAGQVLPVPSGVS 113
P G + SG ++ +G +V+ +GD+V + G YAE V ++ +S
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLS 127
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
AA+ P T + + + G+ L +H G+ G+G AIQ+ K +
Sbjct: 128 FLQAASLPTAGLTALQAL-NQAEVKQGDVVL----------IHAGAGGVGHLAIQLAKQK 176
Query: 174 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 233
G V TA S+ A K LGA+ CINY EDF+ + VD ++D +G +
Sbjct: 177 GTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTP-----VDAVIDLVGGDVGIQ 230
Query: 234 NLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292
++ L G + + T G E+ AK+ +A GL K + E+
Sbjct: 231 SIDCLKETGCIVSVPTITAGRVIEV------AKQKHRRAFGLL------KQFNIEELHY- 277
Query: 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
+ ++ K++ I + L EA AH+L+E+ GK++
Sbjct: 278 LGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVF 318
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 130/307 (42%), Gaps = 19/307 (6%)
Query: 31 LIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90
L V T+LN D + G P + +C + G++ S G +V ++
Sbjct: 1563 LCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDAS----GRRVMGMVP 1618
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
G A V + VPS +L++AA+ P V T + ++ + + PGES L+
Sbjct: 1619 AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI----- 1673
Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDF 206
H GS G+G AI + +G RVF T GS EK A + L N + F
Sbjct: 1674 -----HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSF 1728
Query: 207 VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 266
V T GKGVD++L+ + Q ++ L GR IG + ++F K
Sbjct: 1729 EQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKN 1788
Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 326
+T L S E A EV + + I G V+P+ P + A + M +
Sbjct: 1789 VTFHGILLDSLFEEGGA-TWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGK 1847
Query: 327 HIGKIML 333
HIGK+++
Sbjct: 1848 HIGKVVI 1854
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 150/332 (45%), Gaps = 35/332 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + G P L+L ++ +P+ ++ EV+++VEA LN AD L R G+Y
Sbjct: 2 KAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAY---------- 49
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
L G V G + AL+ GG AE+VAVP G +LP+P G+S ++AAAFP
Sbjct: 50 -LTRLHPPFIPGXEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFP 108
Query: 122 EVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA 181
T + + PGE LV + + T A+Q+ + G+RV A
Sbjct: 109 VSFLTAY-LALKRAQARPGEKVLVQAAAGALG----------TAAVQVARAXGLRVLAAA 157
Query: 182 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNI 240
EKLA+ LGA+ Y A V E G+D++L+ G + +LG L
Sbjct: 158 SRPEKLALPLALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAH 210
Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
GRL IG G + L + L V L E +V E + P +
Sbjct: 211 GGRLVYIGAAEGEVAPIPPLRLXRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG-R 267
Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 332
+++PV+ P EA A + + H GK++
Sbjct: 268 ELRPVVGPVFPFAEAEAAFRALLDRGHTGKVV 299
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP- 61
A V+ + P VL+ ++ PQ +VL+++EA+ N D R G P P P
Sbjct: 10 AAVVEEANGPFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP--HAQQPLPA 65
Query: 62 --GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
G + +GT+++VG V ++VGD V L GG G +A+ AV A + P+ ++
Sbjct: 66 ILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTX 125
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG 174
+ A+ P V T W + + + G++ L+ V AIQ+ +G
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHV----------AIQIALARG 175
Query: 175 VRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 227
RVF TA + L +DLGA + + + ED+ A E T G+G D++ D +G
Sbjct: 176 ARVFATARGSD-LEYVRDLGATPIDASREPEDYAA---EHTAGQGFDLVYDTLG 225
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 1 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ P E + L ++ P D ++L++ +N +D G Y P
Sbjct: 24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83
Query: 58 SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G E G ++++G + S R+ VG Q A + G +AE VPA PVPS +
Sbjct: 84 PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 140
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
T + ++ LS G+ LV + G G FA+Q+ K
Sbjct: 141 YLTLLVSGTTAYISLKELGGLSEGKKVLVT----------AAAGGTGQFAMQLSKKAKCH 190
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
V T S+EK A K LG D INYKTE +K+E +GVDV+ + +G + F +
Sbjct: 191 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD 249
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
+L GRL +IG G +T ++ + A L
Sbjct: 250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL 280
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 1 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ P E + L ++ P D ++L++ +N +D G Y P
Sbjct: 3 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 62
Query: 58 SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G E G ++++G + S R+ VG Q A + G +AE VPA PVPS +
Sbjct: 63 PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 119
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
T + ++ LS G+ LV + G G FA+Q+ K
Sbjct: 120 YLTLLVSGTTAYISLKELGGLSEGKKVLVT----------AAAGGTGQFAMQLSKKAKCH 169
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
V T S+EK A K LG D INYKTE +K+E +GVDV+ + +G + F +
Sbjct: 170 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD 228
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
+L GRL +IG G +T ++ + A L
Sbjct: 229 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL 259
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 1 MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
M+ +V+T+ P E + L ++ P D ++L++ +N +D G Y P
Sbjct: 32 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 91
Query: 58 SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
G E G ++++G + S R+ VG Q A + G +AE VPA PVPS +
Sbjct: 92 PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 148
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
T + ++ LS G+ LV + G G FA+Q+ K
Sbjct: 149 YLTLLVSGTTAYISLKELGGLSEGKKVLVT----------AAAGGTGQFAMQLSKKAKCH 198
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
V T S+EK A K LG D INYKTE +K+E +GVDV+ + +G + F +
Sbjct: 199 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD 257
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
+L GRL +IG G +T ++ + A L
Sbjct: 258 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL 288
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 116/276 (42%), Gaps = 43/276 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ Q P L+++EVE P I EVL++++A + D G +P
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
PG E G + VG V+ KVGD+V C L G G
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
GYAE A V+ +P +S ++AA T + + +T PGE +
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY------ 171
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
G G+G A+Q K G+ V +EKL + K+LGAD+ +N ED +KE
Sbjct: 172 -----GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE 226
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
+ GG V+ + FQ S+ G ++G
Sbjct: 227 KVGGVHAAVV-TAVSKPAFQSAYNSIRRGGACVLVG 261
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 43/276 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ Q P L+++EVE P I EVL++++A + D G +P
Sbjct: 1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
PG E G + VG V+ KVGD+V C L G G
Sbjct: 59 PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
GYAE A V+ +P +S ++AA T + + +T PGE +
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY------ 171
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
G G G A+Q K G+ V +EKL + K+LGAD+ +N ED +KE
Sbjct: 172 -----GIGGFGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE 226
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
+ GG V+ + FQ S+ G ++G
Sbjct: 227 KVGGVHAAVV-TAVSKPAFQSAYNSIRRGGACVLVG 261
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 7 TQPGSPEVLQLQEVEDPQ----IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
T+PGS + L L V++P + D EV I + A +N D L G YP G + G
Sbjct: 216 TRPGSLDGLAL--VDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASL-G 269
Query: 63 LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
E +G ++ G V+ GD+V ++ + V +P+G S AA+ P
Sbjct: 270 SEGAGVVVETGPGVTGLAPGDRVMGMIPKA-FGPLAVADHRMVTRIPAGWSFARAASVPI 328
Query: 123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182
V T + + + L PGES LV H + G+G AIQ+ + G V+ TA
Sbjct: 329 VFLTAYYALVDLAGLRPGESLLV----------HSAAGGVGMAAIQLARHLGAEVYATAS 378
Query: 183 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 242
++ AV +L + + +T DF + TGG+GVDV+L+ + + +L L G
Sbjct: 379 EDKWQAV--ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGG 436
Query: 243 RLFIIG 248
R +G
Sbjct: 437 RFLELG 442
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 11/254 (4%)
Query: 2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
K I + G+P +VLQ++ +KD+EV +++ +N +D + G+Y
Sbjct: 6 KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
PG E G + +VG VSR +G +V L G G + E V A V+P+P + AA
Sbjct: 66 PGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM 125
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
T W T T +L + LV+ C S IG Q+ + R+
Sbjct: 126 YINPLTAWVTCTETLNLQRNDVLLVNAC----------GSAIGHLFAQLSQILNFRLIAV 175
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
+ + LGA I+ T V E T G G D +D +G SL
Sbjct: 176 TRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRP 235
Query: 241 DGRLFIIGTQGGAK 254
+G IG G +
Sbjct: 236 NGHFLTIGLLSGIQ 249
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 158/376 (42%), Gaps = 70/376 (18%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L+L+++ P+ K +VLIK+EA + +D R+G + +
Sbjct: 1 MRAMRLVEIGKP--LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
G G YAE V VP + L +S +AA T + V S L P ++ +V
Sbjct: 119 GINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS-LDPSKTLVVI 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
G G+GT AIQ+ K G + EE L K GAD IN ++D
Sbjct: 178 ----------GAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
V+ ++ T GKG D ++D + +L+I +++ QG + + LF
Sbjct: 228 PVSEIRRITQGKGADAVID------LNNSEKTLSI--YPYVLAKQG----KYVMVGLFGA 275
Query: 266 RLTVQAAGLRSRSTENKALIVSEVEKN------VWPAIAVGKVKPVIYKYLPLCEAAEAH 319
L A + T N+ + + N + GKVKP++ K + L EA EA
Sbjct: 276 DLKYHAPLI----TLNEVQFIGSLVGNQSDFLGIMSLAEAGKVKPMVTKTMKLEEANEAI 331
Query: 320 QLMESSQHIGKIMLVP 335
+E+ + +G+ +LVP
Sbjct: 332 DNLENFKAVGRQVLVP 347
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGT 164
V+P+P ++ +AA F T W ++ LSPGE L+ H + G+G
Sbjct: 4 VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLI----------HSATGGVGM 53
Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 224
A+ + K G R++ TAGS+ K + LG + + ++ DF + E T G GVDV+L+
Sbjct: 54 AAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLN 113
Query: 225 CMGASYFQRNLGSLNIDGRLFIIGTQ 250
+ QR + L GR +G +
Sbjct: 114 SLAGEAIQRGVQILAPGGRFIELGKK 139
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 152/384 (39%), Gaps = 85/384 (22%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----------------RKGSYPPPKGAS 58
L+L EV P++ DEVL+ V A+++N R+G + +
Sbjct: 50 LRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT-RHDQ 108
Query: 59 PYP--GLECSGTILSVGKNVSRWKVGDQVC----------------ALLGG--------- 91
PY G +CSG ++ G V RWK GD V +LG
Sbjct: 109 PYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFET 168
Query: 92 --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVDF 147
GG AE V A Q+LP P+ ++ ++AA P A T + + + + G+ L+
Sbjct: 169 NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLI-- 226
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK----T 203
G S G+G++AIQ K G S +K A + LG D+ IN T
Sbjct: 227 --------WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 204 EDF-------------VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 250
+D +A++ E G+ D++ + G F G I+ +
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTF----------GLSVIVARR 328
Query: 251 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 310
GG +S + + ++ + E ++ G V P +
Sbjct: 329 GGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVY 388
Query: 311 PLCEAAEAHQLMESSQHIGKIMLV 334
PL EAAEA +++++S+ +GK+ ++
Sbjct: 389 PLAEAAEACRVVQTSRQVGKVAVL 412
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 153/355 (43%), Gaps = 44/355 (12%)
Query: 1 MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
+KAI QP + + ++ P+ K E+L+K+++ ++N DT QR A
Sbjct: 3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK---A 59
Query: 58 SPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSL 114
G + G + SVG V+ + GD V + G AE + V P +S
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISA 119
Query: 115 KDAAAFPEVACTVWSTVF------MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQ 168
+ A + P T + T+F + + G++ L+ G+ G+G+ A Q
Sbjct: 120 EQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLI----------INGAGGVGSIATQ 169
Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228
+ K G+RV TA E + K +GAD+ +N+K E + + K + G + VD +
Sbjct: 170 IAKAYGLRVITTASRNETIEWTKKMGADIVLNHK-ESLLNQFKTQ-GIELVDYVFCTFNT 227
Query: 229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR----------S 278
+ ++ L + R I T + + ++ +L K L+ + +R
Sbjct: 228 DMYYDDMIQL-VKPRGH-IATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKH 285
Query: 279 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
E I ++VE+N++ ++ L +AHQ++ES+ IGK+++
Sbjct: 286 HEYLEDITNKVEQNIYQPTTTKVIEG-----LTTENIYQAHQILESNTMIGKLVI 335
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 51/348 (14%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
L+ +++ P+ K +E+LI V+ + + D G +P P G E +G ++ +G+
Sbjct: 18 LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGE 77
Query: 75 NVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVL 106
NV WK+GD + C L L G G + + A Q
Sbjct: 78 NVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAA 137
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFA 166
+P G L A TV+ +++L G + + G + G+G+ A
Sbjct: 138 HIPQGTDLAQVAPILCAGITVYKA-LKSANLMAGH----------WVAISGAAGGLGSLA 186
Query: 167 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDC 225
+Q K G RV G E K + + +G +V I++ K +D V V + T G VI
Sbjct: 187 VQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246
Query: 226 MGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI 285
+ + + + + +G ++G GAK ++ + K +++ + + +R+ +AL
Sbjct: 247 VSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREAL- 305
Query: 286 VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
A G VK I K + L E ++ ME Q +G+ ++
Sbjct: 306 ---------DFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVV 343
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 148/372 (39%), Gaps = 64/372 (17%)
Query: 3 AIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS---------- 50
A VI + G EVL+ Q + P I +EV++KV A ++N D R G
Sbjct: 24 AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 51 --YPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPA 102
+ KG +P G + SG ++ G +V +K GD+V A + G +E V V
Sbjct: 84 PLHVKIKGEE-FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI 162
+V P ++ AA+ P VA T WS + L+ C+ + G S G+
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN------CTGKRVLILGASGGV 196
Query: 163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 222
GTFAIQ+ K V S++ + + LGAD I+YK+ ++K K D I
Sbjct: 197 GTFAIQVMKAWDAHV-TAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSL---KPFDFI 252
Query: 223 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 282
LD +G GS F+ G L L L + G+ +
Sbjct: 253 LDNVG--------GSTETWAPDFLKKWSGATYVTLVTPFL----LNMDRLGIADGMLQTG 300
Query: 283 ALIVSEVEKNVWPAIA---------------------VGKVKPVIYKYLPLCEAAEAHQL 321
+ S+ K+ W + GK++PVI + P + EA
Sbjct: 301 VTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLK 360
Query: 322 MESSQHIGKIML 333
+E GK ++
Sbjct: 361 VERGHARGKTVI 372
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 50/315 (15%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGAS 58
MKA V+ G+P L+++EV+ P +VL+K+EA+ + D +G +P PP
Sbjct: 7 MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPL--- 61
Query: 59 PY-PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG-------------- 90
P+ PG E G + +VG V+R K GD+V C L G
Sbjct: 62 PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 91 -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
GGYAE V V +P V + A TV+ + T+ PG+ + +
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTN-ARPGQ-----WVA 175
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
IS G G+G A+Q + G+ V + KL + + LGA + +N + ED V
Sbjct: 176 IS------GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEA 229
Query: 210 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 269
++ + GG V++ + S F + +G G + ++G G I + K L +
Sbjct: 230 IQRDIGGAH-GVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHI 287
Query: 270 QAAGLRSRSTENKAL 284
+ + +R+ +AL
Sbjct: 288 AGSIVGTRADLQEAL 302
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 44/312 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G+P L + EV PQ +V +K+EA+ + D G +P
Sbjct: 3 MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG---------------GG 92
PG E G + +VG VSR K GD+V C L G G
Sbjct: 61 PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
GY E V V +P V + A TV+ + +T PG+ ++
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTD-TRPGQWVVIS------ 173
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
G G+G A+Q + G+RV + KL + + LGA+V +N + D A +++
Sbjct: 174 -----GIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQK 228
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA 272
E GG V++ + F + +G + G + + G G I + K +T++ +
Sbjct: 229 EIGGAH-GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG-DFGTPIFDVVLKGITIRGS 286
Query: 273 GLRSRSTENKAL 284
+ +RS ++L
Sbjct: 287 IVGTRSDLQESL 298
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 146/383 (38%), Gaps = 89/383 (23%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKGSYPP--PKGASP 59
+ L EV P++ E L+ V A+++N L+R G P + P
Sbjct: 76 IHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLP 135
Query: 60 YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
Y G + +G +L G V+ W+ GD+V A
Sbjct: 136 YHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETN 195
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVDFC 148
GG AE V Q++P P ++ ++AAA V T + + + + G++ L+
Sbjct: 196 FGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLI--- 252
Query: 149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-----YK- 202
G S G+G++A Q G S +K +C+ +GA+ I+ YK
Sbjct: 253 -------WGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKF 305
Query: 203 -----TED------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251
T+D F R++E TGG+ +D++ + G F ++ G + +
Sbjct: 306 WKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTS 365
Query: 252 GAKTELNITSLFA--KRLT-VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 308
G E + L+ KR+ A R N+ IA GK+ P + K
Sbjct: 366 GYMHEYDNRYLWMSLKRIIGSHFANYREAYEANR-------------LIAKGKIHPTLSK 412
Query: 309 YLPLCEAAEAHQLMESSQHIGKI 331
L E +A + + H GK+
Sbjct: 413 TYSLEETGQAAYDVHRNLHQGKV 435
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 153/374 (40%), Gaps = 66/374 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
G G YAE V VP + + ++ +AA T + V S L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
T A+Q+ K G + EE + K GAD IN +D
Sbjct: 178 GAGGGLG----------TMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGGAKTELNITS 261
+A ++ T KGVD ++D +Y ++ L +L G+ ++G G +L+ +
Sbjct: 228 PLAEIRRITESKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA---DLHYHA 281
Query: 262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
+Q G + + I+ E GKVKP+I K + L EA EA
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDN 333
Query: 322 MESSQHIGKIMLVP 335
+E+ + IG+ +L+P
Sbjct: 334 LENFKAIGRQVLIP 347
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 153/374 (40%), Gaps = 66/374 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
G G YAE V VP + + ++ +AA T + V S L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
T A+Q+ K G + EE + K GAD IN +D
Sbjct: 178 GAGGGLG----------TMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGGAKTELNITS 261
+A ++ T KGVD ++D +Y ++ L +L G+ ++G G +L+ +
Sbjct: 228 PLAEIRRITESKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA---DLHYHA 281
Query: 262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
+Q G + + I+ E GKVKP+I K + L EA EA
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDN 333
Query: 322 MESSQHIGKIMLVP 335
+E+ + IG+ +L+P
Sbjct: 334 LENFKAIGRQVLIP 347
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 44/313 (14%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA V+ G P L + EV PQ ++ + ++A+ + D +G +P
Sbjct: 26 MKAAVVRAFGKP--LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFI 83
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
PG E G + +VG V K GD+V C LGG G
Sbjct: 84 PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNG 143
Query: 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
G+AE V V +P + + A TV+ + +T PG D+ IS
Sbjct: 144 GFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTD-TKPG-----DWVVIS- 196
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK 211
G G+G A+Q + G+ V + KL + + LGA V +N KT D A ++
Sbjct: 197 -----GIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTVADPAAYIR 251
Query: 212 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 271
+ET G V++ + F++ LG + G + + G G L+I ++ +TV+
Sbjct: 252 KETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGLPPG-DFPLSIFNMVLNGVTVRG 310
Query: 272 AGLRSRSTENKAL 284
+ + +R ++L
Sbjct: 311 SIVGTRLDLQESL 323
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 151/374 (40%), Gaps = 66/374 (17%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
M+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61 P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
G E +G I VG V + GD V C + L
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90 G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
G G YAE V VP + + ++ +AA T + V S L P ++ LV
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
T A+Q+ K G + EE + K GAD IN +D
Sbjct: 178 GAGGGLG----------TMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS 261
+A ++ T KGVD ++D + S + + L G+ ++G G +L+ +
Sbjct: 228 PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK---QGKYVMVGLFGA---DLHYHA 281
Query: 262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
+Q G + + I+ E GKVKP+I K + L EA EA
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDN 333
Query: 322 MESSQHIGKIMLVP 335
+E+ + IG+ +L+P
Sbjct: 334 LENFKAIGRQVLIP 347
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 147/385 (38%), Gaps = 93/385 (24%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKG--SYPPPKGASP 59
+ L +V P++ E L+ V A+++N L+R G S + P
Sbjct: 58 IHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLP 117
Query: 60 YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
Y G + +G +L G V+ W+ GD+V A
Sbjct: 118 YHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETN 177
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVDFC 148
GG AE V + Q++P P +S ++AAA V T + + + + G++ L
Sbjct: 178 FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL---- 233
Query: 149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-------- 200
+ G S G+G++A Q G S +K +C+ +GA+ I+
Sbjct: 234 ------IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRF 287
Query: 201 YKTED---------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251
+K E+ F R++E TGG+ +D++ + G F G + +G
Sbjct: 288 WKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETF----------GASVFVTRKG 337
Query: 252 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE--KNVWPA---IAVGKVKPVI 306
G T TS + + R K +I S + W A IA G++ P +
Sbjct: 338 GTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTL 392
Query: 307 YKYLPLCEAAEAHQLMESSQHIGKI 331
K L + +A + + H GK+
Sbjct: 393 SKVYSLEDTGQAAYDVHRNLHQGKV 417
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 30/249 (12%)
Query: 23 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
P + D+V ++VEA A+N +DT R G + P + G + +GT+++VG +V+ +VG
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTKMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83 DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT--VWSTVF 132
D+V C G + V G+V +P G+S + AAA P T + +
Sbjct: 88 DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 192
SP Y V+GGS+ T +QM + G + + S + K
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 249
GA+ +Y+ + ++ T + LDC+ N++ F IG
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 250 QGGAKTELN 258
GG LN
Sbjct: 255 AGGHYVSLN 263
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 30/249 (12%)
Query: 23 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
P + D+V ++VEA A+N +DT R G + P + G + +GT+++VG +V+ +VG
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTSMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83 DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT--VWSTVF 132
D+V C G + V G+V +P G+S + AAA P T + +
Sbjct: 88 DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 192
SP Y V+GGS+ T +QM + G + + S + K
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 249
GA+ +Y+ + ++ T + LDC+ N++ F IG
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 250 QGGAKTELN 258
GG LN
Sbjct: 255 AGGHYVSLN 263
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 1 MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA V+ +P+ L E E IK +E L+ +E + D G Y G
Sbjct: 1 MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGT-- 56
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
G E G + +G +VS +VGD+V C + GY
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95 ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
AE+ V A + VP G+ +A++ T + + S + PG+ + V F
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGD-WQVIF---- 170
Query: 152 YSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
G+ G+G AIQ K G +V +++KL + K +GADV IN + V +
Sbjct: 171 ------GAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEI 224
Query: 211 KEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247
K+ TGG GV + C A F++ + SL G++ +
Sbjct: 225 KKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAV 262
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 5 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 64
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 65 TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
PA + P+G+++ A T + + L+PG+ + + +G
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 175
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
G+S +G +A Q+GK + +E +A K+LGA I +++F +
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTI 235
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
KE ++GG+ + L+C+G LN +G + G
Sbjct: 236 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 27 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 86
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 87 TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
PA + P+G+++ A T + + L+PG+ + + +G
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 197
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
G+S +G +A Q+GK + +E +A K+LGA I +++F +
Sbjct: 198 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTI 257
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
KE ++GG+ + L+C+G LN +G + G
Sbjct: 258 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 297
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 44/281 (15%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 5 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 64
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 65 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
PA + P+G+++ A T + + L+PG+ + + +G
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 175
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
G+S +G +A Q+GK + +E +A K+LGA I + +F +
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI 235
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
KE ++GG+ + L+C+G LN +G + G
Sbjct: 236 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 44/281 (15%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G YP P K
Sbjct: 27 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 86
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 87 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
PA + P+G+++ A T + + L+PG+ + + +G
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 197
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
G+S +G +A Q+GK + +E +A K+LGA I + +F +
Sbjct: 198 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI 257
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
KE ++GG+ + L+C+G LN +G + G
Sbjct: 258 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 297
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 1 MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MKA V+ +P+ L E E IK +E L+ +E + D G + G
Sbjct: 1 MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGT-- 56
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
G E G + +G +VS +VGD+V C + GY
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95 ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
AE+ V A + VP G+ +A++ T + + S + PG+ + V F
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGD-WQVIF---- 170
Query: 152 YSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
G+ G+G AIQ K G +V +++KL + K +GADV IN + V +
Sbjct: 171 ------GAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEI 224
Query: 211 KEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247
K+ TGG GV + C A F++ + SL G++ +
Sbjct: 225 KKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAV 262
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
++A+V G P +V++L+ +E ++ +V +K+ A +N +D +G+Y
Sbjct: 27 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
G E +++VG NV+ K GD V G G AV + + L VPS + L+ AA
Sbjct: 87 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
CT + + L PG+S + + +SG+G IQ+ G+R
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQN----------ASNSGVGQAVIQIAAALGLRTI 196
Query: 179 VTAGSE---EKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYF 231
+KL+ K LGA+ I TE+ + R + + K + + L+C+G
Sbjct: 197 NVVRDRPDIQKLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSS 253
Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
L L G + G +++ L K L ++
Sbjct: 254 TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLR 292
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 154/370 (41%), Gaps = 70/370 (18%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPPKG 56
AI T+PG +L EV+ P+ EVLIKV AT++ D + PP+
Sbjct: 6 AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ- 62
Query: 57 ASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG-- 90
G E +G ++ +G V +VGD VC + G
Sbjct: 63 ---IXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 119
Query: 91 -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
G +AE VPA + P + + A E TV + +S G+S L+
Sbjct: 120 TDGVFAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLIT--- 173
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208
G+ +G I + K G V V+ S+ + + K +GAD IN ED V
Sbjct: 174 --------GAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVK 225
Query: 209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKR 266
V + T G GVDV L+ GA ++ L ++ GR+ ++G G T + N +F K
Sbjct: 226 EVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KA 284
Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLME 323
LT+ G+ R VS + ++ GK+ P+I +KY + EA +L
Sbjct: 285 LTIY--GITGRHLWETWYTVSRLLQS-------GKLNLDPIITHKYKGFDKYEEAFELXR 335
Query: 324 SSQHIGKIML 333
+ + GK++
Sbjct: 336 AGK-TGKVVF 344
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 154/370 (41%), Gaps = 70/370 (18%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPPKG 56
AI T+PG +L EV+ P+ EVLIKV AT++ D + PP+
Sbjct: 7 AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ- 63
Query: 57 ASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG-- 90
G E +G ++ +G V +VGD VC + G
Sbjct: 64 ---IXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 120
Query: 91 -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
G +AE VPA + P + + A E TV + +S G+S L+
Sbjct: 121 TDGVFAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLIT--- 174
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208
G+ +G I + K G V V+ S+ + + K +GAD IN ED V
Sbjct: 175 --------GAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVK 226
Query: 209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKR 266
V + T G GVDV L+ GA ++ L ++ GR+ ++G G T + N +F K
Sbjct: 227 EVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KA 285
Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLME 323
LT+ G+ R VS + ++ GK+ P+I +KY + EA +L
Sbjct: 286 LTIY--GITGRHLWETWYTVSRLLQS-------GKLNLDPIITHKYKGFDKYEEAFELXR 336
Query: 324 SSQHIGKIML 333
+ + GK++
Sbjct: 337 AGK-TGKVVF 345
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
++A+V G P +V++L+ +E ++ +V +K+ A +N +D +G+Y
Sbjct: 14 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 73
Query: 60 YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
G E +++VG NV+ K GD V G G AV + + L VPS + L+ AA
Sbjct: 74 VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 133
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
CT + + L PG+S + + +SG+G IQ+ G+R
Sbjct: 134 TLGVNPCTAYRMLMDFEQLQPGDSVIQN----------ASNSGVGQAVIQIAAALGLRTI 183
Query: 179 VTAGSE---EKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYF 231
+KL+ K LGA+ I TE+ + R + + K + + L+C+G
Sbjct: 184 NVVRDRPDIQKLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSS 240
Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
L L G + G +++ L K L ++
Sbjct: 241 TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLR 279
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 44/281 (15%)
Query: 2 KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
+A++ TQ G P +VL Q E++D + +EV++K + +N +D Q +G P P K
Sbjct: 5 QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKT 64
Query: 57 A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
+ P C ++ VG NVS + GD V LG K+
Sbjct: 65 TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99 AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
PA + P+G+++ A T + + L+PG+ + + +G
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 175
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
G+S +G +A Q+GK + +E +A K+LGA I + +F +
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI 235
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
KE ++GG+ + L+C+G LN +G + G
Sbjct: 236 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 145/373 (38%), Gaps = 66/373 (17%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+A+ + + G P L LQE+ P+ K +VLIKVEA + +D R+G + +
Sbjct: 2 RAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLG 59
Query: 62 -------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG 90
G E +G I VG V + GD V C + LG
Sbjct: 60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
G YAE V VP + ++ +AA T + V S L P ++ LV
Sbjct: 120 INFDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVG 178
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
T A+Q+ K G + EE + K GAD IN +D
Sbjct: 179 AGGGLG----------TXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDP 228
Query: 207 VARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 262
+A ++ T KGVD ++D + S + + L G+ +G G +L+ +
Sbjct: 229 LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK---QGKYVXVGLFG---ADLHYHAP 282
Query: 263 FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 322
+Q G + + I E GKVKP I K L EA EA +
Sbjct: 283 LITLSEIQFVGSLVGNQSDFLGIXRLAE--------AGKVKPXITKTXKLEEANEAIDNL 334
Query: 323 ESSQHIGKIMLVP 335
E+ + IG+ +L+P
Sbjct: 335 ENFKAIGRQVLIP 347
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 150/374 (40%), Gaps = 70/374 (18%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
M+AI+ T+P +L EV+ P+ EVLIKV AT++ D + PP
Sbjct: 5 MQAIMKTKPAYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG 90
+ G E +G ++ VG V +VGD VC + G
Sbjct: 63 Q----IMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFG 118
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
G +A VPA P + + AA E TV G S L+
Sbjct: 119 VDMDGVFAHYAIVPAKNAWKNPKDMP-PEYAALQEPLGNAVDTVLAGP--IAGRSTLIT- 174
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
G+ +G I + K G V V+ SE + + K +GAD +N ED
Sbjct: 175 ----------GAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDP 224
Query: 207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFA 264
V V + T G GV+V L+ GA ++ L ++ GR+ ++G T + N +F
Sbjct: 225 VKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIF- 283
Query: 265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQL 321
K L V G+ R VS + I GK+ P+I +KY + EA +L
Sbjct: 284 KALEVH--GITGRHLWETWYTVSSL-------IQSGKLNLDPIITHKYKGFDKFEEAFEL 334
Query: 322 MESSQHIGKIMLVP 335
M + + GK++ P
Sbjct: 335 MRAGK-TGKVVFFP 347
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 19 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-PYPGLECSGTILSVGKNVS 77
E+ P ++L++V+A ++N D R+ + PP G G + +G + +VG +V+
Sbjct: 44 ELPKPAPAGHDILVEVKAVSVNPVDYKVRRST--PPDGTDWKVIGYDAAGIVSAVGPDVT 101
Query: 78 RWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
++ GD+V +++ G AE V V P + +AAA P + T W F
Sbjct: 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDR 161
Query: 135 SHLS---PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVC 190
++ PG + + GG+ G+G+ A+Q+ + + + V TA E
Sbjct: 162 LDVNKPVPGAAPAILIV--------GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV 213
Query: 191 KDLGADVCINY 201
K LGA I++
Sbjct: 214 KSLGAHHVIDH 224
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
+A+++ Q + +Q +E+ Q+ +V + V ++LN D L G + P
Sbjct: 2 QALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPXIP 61
Query: 62 GLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV 112
G++ +GT+ G+ V + W VG+ GG AE+ V ++ +P+G+
Sbjct: 62 GIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHW-----GGLAERARVKGDWLVALPAGL 116
Query: 113 SLKDA-----AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAI 167
S ++A A F C + + P + +V V G S G+G+ A+
Sbjct: 117 SSRNAXIIGTAGFTAXLCV---XALEDAGIRPQDGEVV---------VTGASGGVGSTAV 164
Query: 168 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227
+ G +V +G E K LGA+ ++ + E +R E+ G +D +G
Sbjct: 165 ALLHKLGYQVAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGA---IDTVG 220
Query: 228 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
+ L N G + G GG + + + +Q
Sbjct: 221 DKVLAKVLAQXNYGGCVAACGLAGGFALPTTVXPFILRNVRLQ 263
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
L++ C + + V+ + +G+ Q+ K +G +V GS+EK+A + LG DV N
Sbjct: 132 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFN 191
Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
YKT + + ++ G D D +G + +G + GR+ I G
Sbjct: 192 YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 239
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKN-VSRWKVGDQVC- 86
+VLIKV ++N +D KG Y P+ G E GTI++ G ++ VG +V
Sbjct: 51 QVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAF 110
Query: 87 --ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGE 141
L G +AE A +P+ V +D AA P A + V GE
Sbjct: 111 ATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQE-----GE 165
Query: 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 201
V G+S + I + K +G R VT +E++A+ KD+GA +N
Sbjct: 166 KAFV---------XTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNE 216
Query: 202 KTEDFVARVKEETGGKGVDVILDCM 226
K DF A ++E + + LD +
Sbjct: 217 KAPDFEATLREVXKAEQPRIFLDAV 241
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
L++ C + + V+ + +G+ Q+ K +G +V GS+EK+A + LG DV N
Sbjct: 153 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFN 212
Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
YKT + + ++ G D D +G + +G + GR+ I G
Sbjct: 213 YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 20 VEDP--QIKDDEVLIKVEATALNRA--DTLQRKGSYPPPKGASPYPGLECSGTILSVGKN 75
VE P + + ++L+K E +L+ A + SY PP G G +L V K+
Sbjct: 29 VETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVL-VSKH 87
Query: 76 VSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSL-KDAAAFPEVACTVWSTVFMT 134
++ GD V LG Y + P G PS L + +A T + +
Sbjct: 88 PG-FQAGDYVNGALGVQDYF--IGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDV 144
Query: 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDL 193
GE+ ++ G + +G+ A Q+ + +G RV AG EK + ++L
Sbjct: 145 GQPKNGETVVI----------SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL 194
Query: 194 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 249
G D I+YK ED A +K E KG+DV D +G L + R+ + G
Sbjct: 195 GFDGAIDYKNEDLAAGLKREC-PKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGA 249
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
L++ C + + V + +G+ Q+ K +G +V AGS+EK+A K +G D N
Sbjct: 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFN 196
Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
YKT + + ++ G D D +G + L + G++ I G
Sbjct: 197 YKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG 244
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 128/329 (38%), Gaps = 67/329 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MKA+ T+ GS V+ ++ P E+L+KV A L +D P + A
Sbjct: 1 MKAVQYTEIGSEPVVV--DIPTPTPGPGEILLKVTAAGLCHSDIFVMD--MPAAQYAYGL 56
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
P G E GT+ +G+ V+ + VGD V CA
Sbjct: 57 PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 88 --LLGGGGYAE-------KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
L G AE + VP G + PV + L DA P A + + L
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPV-AAAPLTDAGLTPYHAIS-----RVLPLLG 170
Query: 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADV 197
PG + +V G G+G IQ+ + RV +++LA+ +++GAD
Sbjct: 171 PGSTAVVI-----------GVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADA 219
Query: 198 CINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTE 256
+ A ++E TGG+G + D +GA S + +DG + ++G GA +
Sbjct: 220 AVKSGAGAADA-IRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAK 278
Query: 257 LNITSL-FAKRLTVQAAGLRSRSTENKAL 284
+ + F + G RS E AL
Sbjct: 279 VGFFMIPFGASVVTPYWGTRSELMEVVAL 307
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 148/377 (39%), Gaps = 78/377 (20%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
M+A+ P E L L + P+ E+L++VEA ++ D +G PP
Sbjct: 1 MRALAKLAP--EEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58
Query: 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQV------------------------CALLG 90
G E SG + +VG V R +VGD V +LG
Sbjct: 59 L----VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILG 114
Query: 91 ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
GG+AE V VPA P + + AA V TV+ S +S G+S L+
Sbjct: 115 VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-HTVYAGSGVS-GKSVLIT- 171
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
G+ IG A + + G + V+ + +LA + AD +N ED
Sbjct: 172 ----------GAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDL 220
Query: 207 VARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
+ V+ T G GV+V+L+ G + + L +L G I+G ++
Sbjct: 221 LEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-PIRFDLAGELVM 278
Query: 266 RLTVQAAGLRSRS-----TENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEA 318
R + A G+ R + AL+ S G+V P++ LPL EA
Sbjct: 279 R-GITAFGIAGRRLWQTWMQGTALVYS------------GRVDLSPLLTHRLPLSRYREA 325
Query: 319 HQLMESSQHIGKIMLVP 335
L+ S Q + K++L P
Sbjct: 326 FGLLASGQAV-KVILDP 341
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 115/284 (40%), Gaps = 35/284 (12%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
++A+++ Q + +Q +++ ++ + +V + V ++LN D L G +
Sbjct: 22 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 81
Query: 61 PGLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111
PG++ +GT+ G+ V + W VG+ GG AE+ V ++ +P G
Sbjct: 82 PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHW-----GGLAEQARVKGDWLVAMPQG 136
Query: 112 VSLKDA-----AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFA 166
+ + A A F + C + + + P + +V V G S G+G+ A
Sbjct: 137 LDARKAMIIGTAGFTAMLCVM---ALEDAGVRPQDGEIV---------VTGASGGVGSTA 184
Query: 167 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 226
+ + G +V +G E K LGA + + E +R E+ G +D +
Sbjct: 185 VALLHKLGYQVVAVSGRESTHEYLKSLGASRVLP-RDEFAESRPLEKQVWAGA---IDTV 240
Query: 227 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
G + L +N G + G GG + + + +Q
Sbjct: 241 GDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQ 284
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
+LQ ++ Q + DEVL+KV AT + D + R YP P A G E SG I ++G
Sbjct: 19 FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPA--VLGHEGSGIIEAIGP 76
Query: 75 NVSRWKVGDQV 85
NV+ +VGD V
Sbjct: 77 NVTELQVGDHV 87
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 158 GSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 216
G+ +G A+ K G + + E +L + K LGA IN KT+D VA +KE T G
Sbjct: 198 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257
Query: 217 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLF 263
GV+ L+ G+ ++ + +L I G++ ++G Q G + ++ L
Sbjct: 258 -GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLL 305
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 8 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G E +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 64 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
P G S + F E +V L+P + + C IS
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
+ + GS G+G I K G R+ +++K A K+ GA CIN
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 241
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
+DF ++E E GVD +C+G R
Sbjct: 242 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 9 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G E +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 65 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
P G S + F E +V L+P + + C IS
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
+ + GS G+G I K G R+ +++K A K+ GA CIN
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 242
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
+DF ++E E GVD +C+G R
Sbjct: 243 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 9 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G E +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 65 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
P G S + F E +V L+P + + C IS
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
+ + GS G+G I K G R+ +++K A K+ GA CIN
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 242
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
+DF ++E E GVD +C+G R
Sbjct: 243 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GAS 58
+A V+ + + +Q + + + +VL++V +++N D L S P K
Sbjct: 4 FQAFVVNKTETEFTAGVQTISXDDLPEGDVLVRVHYSSVNYKDGL---ASIPDGKIVKTX 60
Query: 59 PY-PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSG 111
P+ PG++ +G ++S R++ GD+V A + GGY+E + ++P+P G
Sbjct: 61 PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 112 VSLKDAAAFPEVACTVWSTVF-MTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQM 169
++LK+A A T ++ + H L+P ++ V G + G+G+ A+
Sbjct: 119 LTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGPVL---------VTGATGGVGSLAVSX 169
Query: 170 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
+G V + G + + LGA + ED A + +D +G
Sbjct: 170 LAKRGYTVEASTGKAAEHDYLRVLGAKEVL--AREDVXAERIRPLDKQRWAAAVDPVGGR 227
Query: 230 YFQRNLGSLNIDGRLFIIGTQGGAK 254
L G + + G GGA+
Sbjct: 228 TLATVLSRXRYGGAVAVSGLTGGAE 252
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Query: 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEE 213
V S +G Q+ K G V +AGS+EK+ + K G D NYK E + +
Sbjct: 161 VSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKR 220
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLFAKRLT 268
G+D+ + +G L ++N+ GR+ + G E N++++ KR
Sbjct: 221 CFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNR 280
Query: 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 328
+Q G +K S+ + V P I GK+ V L +A EA + +++
Sbjct: 281 IQ--GFVVSDFYDK---YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNV 335
Query: 329 GKIMLV 334
GK ++V
Sbjct: 336 GKQVVV 341
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 108/275 (39%), Gaps = 50/275 (18%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V + G P L ++E+E K EV IK+ ATA+ D G+ P+G P
Sbjct: 8 KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
G +G + SVG+ V++ K GD V L +K+ V G+ L +
Sbjct: 64 LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
P G S + F E +V L+P + + C IS
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
+ + GS G+G I K G R+ +++K A K+ GA CIN
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 241
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
+DF ++E E GVD +C+G R
Sbjct: 242 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 58/263 (22%)
Query: 12 PEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGS------YPPPKGASPYPGLE 64
PEV +++EV +P+I K E++IKV+A + +D + YP G G E
Sbjct: 40 PEV-RVEEVPEPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHE 98
Query: 65 CSGTILSVG------KNVSRWKVGDQVCA---LLGG------------------------ 91
SG ++ G + R+++G+ VCA L G
Sbjct: 99 FSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVD 158
Query: 92 GGYAEKVAVPAG------QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-LSPGESFL 144
G +AE V V A ++ V G L A + E ++ V + + PG++ +
Sbjct: 159 GAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVV 218
Query: 145 VDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 204
+ + GG G+ AI + +V ++ SE + + K+LGAD I+ E
Sbjct: 219 I---------LGGGPIGLAAVAI-LKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKE 268
Query: 205 DFVARVKEETGGKGVDVILDCMG 227
+FV V + T G G + L+ G
Sbjct: 269 NFVEAVLDYTNGLGAKLFLEATG 291
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 17 LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76
L V+ P + D++L++ +A +N D K + P PG++ +G I+ VG V
Sbjct: 19 LNSVDIPALAADDILVQNQAIGINPVDWKFIKAN-PINWSNGHVPGVDGAGVIVKVGAKV 77
Query: 77 SRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
+G +V +L G +AE + +V +P +S + AAA P T W
Sbjct: 78 DSKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAW 132
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 45/244 (18%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRAD-----------TLQRKGSYPPPKGASPYP-- 61
L L ++ P DEVLI++EA+ LN +D T + G+ P + P
Sbjct: 20 LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADXSTAKASGTAERPIVTARVPEG 79
Query: 62 ---------------GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL 106
G E +G ++ G + + + + A +GG Y++ +PA Q L
Sbjct: 80 AXRSXAGRLDASXPVGNEGAGVVVEAGSSPAAQALXGKTVAAIGGAXYSQYRCIPADQCL 139
Query: 107 PVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIG 163
+P G + D A+ P A T + H S LV + +S +G
Sbjct: 140 VLPEGATPADGASSFVNPLTALGXVETXRLEGH-----SALVHTAA---------ASNLG 185
Query: 164 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 223
Q+ G+++ +E+ + K GA N + F + E G +
Sbjct: 186 QXLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFXQDLTEALVSTGATIAF 245
Query: 224 DCMG 227
D G
Sbjct: 246 DATG 249
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 142/364 (39%), Gaps = 60/364 (16%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
MK+I+I +P L + E E P EV +KV+ + +D+ +G P K Y
Sbjct: 21 MKSILIEKPNQ---LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 73
Query: 61 P---GLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG--- 90
P G E G I +VG+ V +VG++V A+LG
Sbjct: 74 PRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHA 133
Query: 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
GG++E VPA +P V+ D A T+ + V T H P E+ V +
Sbjct: 134 DGGFSEYAVVPAKNAWKIPEAVA--DQYAVMIEPFTIAANV--TGHGQPTENDTV----L 185
Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
Y G G+ + G V V +E+L K+ GAD IN ++ +
Sbjct: 186 VYG---AGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAIN-NSQTPLGES 241
Query: 211 KEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
E G K +I S + + + R+ ++G +E+ + K L++
Sbjct: 242 FAEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFS-SEPSEVIQQGITGKELSI- 299
Query: 271 AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ-HIG 329
SR NK +V + W + + K + +I A+A L E Q H
Sbjct: 300 ---FSSRLNANKFPVVID-----WLSKGLIKPEKLITHTFDFQHVADAISLFELDQKHCC 351
Query: 330 KIML 333
K++L
Sbjct: 352 KVLL 355
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
+ ++ + + D VLIKV + +N D L K + G++ +GT++S
Sbjct: 19 VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--S 76
Query: 75 NVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
N R+ GD+V A LG GG +E +VP ++P+P +SLK+A + T
Sbjct: 77 NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTAA 136
Query: 129 STVFMTSH--LSP 139
+V LSP
Sbjct: 137 LSVHRLEQNGLSP 149
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK---EE 213
G+ +G F + + + G V V AGS +L + +++GAD+ +N + R K +
Sbjct: 203 GAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI 262
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA- 272
T G+G D IL+ G S L G + + G A + + + L ++ A
Sbjct: 263 THGRGADFILEATGDSRALLEGSELLRRGGFYSVA--GVAVPQDPVPFKVYEWLVLKNAT 320
Query: 273 --GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK 330
G+ T + VS +N + +I LPL EA +A +LMES + + K
Sbjct: 321 FKGIWVSDTSHFVKTVSITSRN------YQLLSKLITHRLPLKEANKALELMESREAL-K 373
Query: 331 IMLVP 335
++L P
Sbjct: 374 VILYP 378
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 110/294 (37%), Gaps = 59/294 (20%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPYP-GLECSGTILSV 72
L+L++ P+ K+DEVL+++ + +D G P G E SGT++ V
Sbjct: 16 LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 73 GKNVSRWKVGDQV----------CALLGGGGY------------------AEKVAVPAGQ 104
GKNV K GD+V C G Y A A
Sbjct: 76 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF 135
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGT 164
+P VSL++ A ++ V + L G + LV G+ IG
Sbjct: 136 CHKLPDNVSLEEGALLEPLSVGVHACRRAGVQL--GTTVLVI-----------GAGPIGL 182
Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-----NYKTEDFVARVKEETGGKGV 219
++ K G V TA S +L V K+ GADV + + + R++ G
Sbjct: 183 VSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP- 241
Query: 220 DVILDCMGAS-------YFQRNLGSLNIDG---RLFIIGTQGGAKTELNITSLF 263
+V +DC G R G+L + G ++ + E++I S+F
Sbjct: 242 NVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 149/356 (41%), Gaps = 58/356 (16%)
Query: 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILS 71
E L +++V P+ + +EVLI++ + R D KG P G E +GTI+
Sbjct: 14 EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 72 VGKNVSRWKVGDQVCALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
VG+ +++ K GD V G K + Q+ +P + + + V
Sbjct: 74 VGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI--IPGQTTNGGFSEYMLVKS 130
Query: 126 TVWSTVFMTSHLSPGESF-LVDFCSISYSDVH----------------GGSSGIGTFAIQ 168
+ W + + LSP E+ L D + S + G G+ + IQ
Sbjct: 131 SRW--LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQ 188
Query: 169 MGKC--QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 226
+ K + + + + S++ +LGAD K D + + + T G G + +D +
Sbjct: 189 ILKALMKNITIVGISRSKKHRDFALELGADYVSEMK--DAESLINKLTDGLGASIAIDLV 246
Query: 227 GASYFQRNLGS-LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI 285
G NLG L +G + ++G +G KR++++A + NK L+
Sbjct: 247 GTEETTYNLGKLLAQEGAIILVGMEG-------------KRVSLEAF---DTAVWNKKLL 290
Query: 286 ------VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
++++E +V GK+KP I K +PL + +A ++ + G+ ++ P
Sbjct: 291 GSNYGSLNDLE-DVVRLSESGKIKPYIIK-VPLDDINKAFTNLDEGRVDGRQVITP 344
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKE 212
V G + G+ A Q+G G RV G++EK L + +LG D +NYKT + +++E
Sbjct: 162 VSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLRE 221
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
G GVDV D +G + +N + + + G
Sbjct: 222 ACPG-GVDVYFDNVGGDISNAVISQMNENSHIILCG 256
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEE 213
V S +G Q K G V +AGS+EK+ + K G D NYK E ++ +
Sbjct: 159 VSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKR 218
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLFAKRLT 268
G+D+ + +G L ++ + GR+ + G E N+ L KR+
Sbjct: 219 YFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIR 278
Query: 269 VQ 270
++
Sbjct: 279 ME 280
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKE 212
V G + G+ A Q+G G RV G++EK L + +LG D +NYKT + +++E
Sbjct: 172 VSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLRE 231
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
G GVDV D +G + N + + + G
Sbjct: 232 ACPG-GVDVYFDNVGGDISNTVISQXNENSHIILCG 266
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKE 212
V G + G+ A Q+G G RV G+ EK + + +LG D INYK +D VA
Sbjct: 166 VSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYK-KDNVAEQLR 224
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
E+ GVDV D +G + + +N + + + G
Sbjct: 225 ESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCG 260
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKE 212
V G + G+ A Q+G G RV G+ EK + + +LG D INYK +D VA
Sbjct: 161 VSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYK-KDNVAEQLR 219
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
E+ GVDV D +G + + +N + + + G
Sbjct: 220 ESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCG 255
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA + + GSP L ++E+E K EV I+V AT + D + PK + +P
Sbjct: 10 KAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCHTDI-----NATDPKKKALFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
G EC+G + SVG V+ +K GD+V
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKV 89
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 96/232 (41%), Gaps = 53/232 (22%)
Query: 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
MK++V G ++++ E P+IK DEV +K+ ++ L +D L R GA
Sbjct: 1 MKSVVNDTDG---IVRVAESVIPEIKHQDEVRVKIASSGLCGSD-LPRIFK----NGAHY 52
Query: 60 YP---GLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLGG- 91
YP G E SG I +VG V GD V CA +G
Sbjct: 53 YPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR 112
Query: 92 --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
GG+AE + V V +P+ + ++D A + TV F HL+ G C
Sbjct: 113 RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPI--TVGLHAF---HLAQG-------CE 160
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCIN 200
+ + + G+ IG AIQ G + V S EKLA+ K GA N
Sbjct: 161 -NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFN 211
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V +P P V++ +V PQ EV IK+ TAL D G P+G P
Sbjct: 10 KAAVAYEPNKPLVIEDVQVAPPQA--GEVRIKILYTALCHTDAYTWSGK--DPEGLFPCI 65
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV 85
G E +G + SVG+ V+ + GD V
Sbjct: 66 LGHEAAGIVESVGEGVTEVQAGDHV 90
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P+ K EV IK+ AT + R D KG+ S +P
Sbjct: 10 KAAVLWEQKQPFSIEEIEVAPPKTK--EVRIKILATGICRTDDHVIKGTM-----VSKFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ K GD+V L
Sbjct: 63 VIVGHEATGIVESIGEGVTTVKPGDKVIPLF 93
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P+ K EV IK+ AT + R D KG+ S +P
Sbjct: 10 KAAVLWEQKQPFSIEEIEVAPPKTK--EVRIKILATGICRTDDHVIKGTM-----VSKFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ K GD+V L
Sbjct: 63 VIVGHEATGIVESIGEGVTTVKPGDKVIPLF 93
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
And Inhibitor
Length = 376
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA + + GSP L ++E+E K EV I+V AT + D + PK + +P
Sbjct: 10 KAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDI-----NATDPKKKALFP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
G EC+G + SVG V+ +K GD+V
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKV 89
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
KA V +P P V++ +V PQ EV +KV TAL D G P+G P
Sbjct: 28 KAAVAWEPNKPLVIEDVQVAPPQA--GEVRVKVLYTALCHTDAYTWSGK--DPEGLFPCV 83
Query: 61 PGLECSGTILSVGKNVSRWKVGDQV 85
G E +G + SVG+ V+ + GD V
Sbjct: 84 LGHEAAGIVESVGEGVTEVQPGDHV 108
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol
Dehydrogenase- Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol
Dehydrogenase- Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase
Complexed With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase
Complexed With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues
Bound To Alcohol Dehydrogenase: Specificity And
Substrate Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh
And R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated
Liver Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+
And 2,2,2- Trifluoroethanol
Length = 374
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad
Double Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double
Mutant Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl
Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl
Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,3-Difluorobenzyl
Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG
MUTANT Complexed With Nad+ And 2,3-Difluorobenzyl
Alcohol
Length = 374
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 29/187 (15%)
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
G E G I+ VG V R KVGD+V + E+ + + P+ SG L F
Sbjct: 58 GHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEE---ESQRGYPMHSGGMLG-GWKFS 113
Query: 122 EVACTVWSTVFMTSHLSPGESFL---------VDFCSISYSDVHG--------------- 157
V+S VF + + L V + + HG
Sbjct: 114 NFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI 173
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 216
G +G ++ G R+F + + + GA INYK D V ++ + T G
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG 233
Query: 217 KGVDVIL 223
KGVD ++
Sbjct: 234 KGVDKVV 240
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 29/187 (15%)
Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
G E G I+ VG V R KVGD+V + E+ + + P+ SG L F
Sbjct: 58 GHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEE---ESQRGYPMHSGGMLG-GWKFS 113
Query: 122 EVACTVWSTVFMTSHLSPGESFL---------VDFCSISYSDVHG--------------- 157
V+S VF + + L V + + HG
Sbjct: 114 NFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI 173
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 216
G +G ++ G R+F + + + GA INYK D V ++ + T G
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDG 233
Query: 217 KGVDVIL 223
KGVD ++
Sbjct: 234 KGVDKVV 240
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 107/292 (36%), Gaps = 57/292 (19%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSV 72
+ ++ V P+ D++L+KVEA + D G +P PP G E G ++
Sbjct: 35 ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTL----GHEFCGIVVEA 90
Query: 73 GKNVSRWKVGDQV---------------------CALLGG------GGYAEKVAVPAGQV 105
G V G ++ C L GG+AE V VP Q
Sbjct: 91 GSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQA 150
Query: 106 LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI---SYSDVHGGSSGI 162
+P + A +AC + VD I S + GG I
Sbjct: 151 FEIPLTLDPVHGAFCEPLACCLHG---------------VDLSGIKAGSTVAILGGGV-I 194
Query: 163 GTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKGV 219
G +Q+ + G V ++ K + +++GA ++ D V + G GV
Sbjct: 195 GLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGV 254
Query: 220 DVILDCMG-ASYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTV 269
DV+++C G A +++ G + I+G G K E+ + + L V
Sbjct: 255 DVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRV 306
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPL 92
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp
Of Horse Liver Alcohol Dehydrogenase In Complex With
Nad And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp
Of Horse Liver Alcohol Dehydrogenase In Complex With
Nad And Inhibitor Trifluoroethanol
Length = 374
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPL 92
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala)
Of Horse Liver Alcohol Dehydrogenase In Complex With
The Isosteric Nad Analog Cpad
Length = 374
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ AT + R+D G+ +P P
Sbjct: 10 KAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPL 92
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
GG+A+ V V+ +P G++++ AA TV+S + SH + L
Sbjct: 133 GGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL---SHFGLKQPGLRGGILGL 189
Query: 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVA-- 208
H G +++ K G V V + S +K +DLGAD D+V
Sbjct: 190 GGVGHMG--------VKIAKAMGHHVTVISSSNKKREEALQDLGAD--------DYVIGS 233
Query: 209 -RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 248
+ K +D ++D + + + L L +DG+L ++G
Sbjct: 234 DQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMG 275
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 145/367 (39%), Gaps = 65/367 (17%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT----LQRKGSYPPPKGAS 58
++V+ PG L+L+ P+ +EVL+++ + + +D R G++ K
Sbjct: 10 SLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPM- 65
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGG----------GGYAEKVAVPAGQVLPV 108
G E SGT+ VG +V K GD+V G G Y ++ P
Sbjct: 66 -VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 109 PSGVS--LKDAAAF----PEVACTVWSTVFMTSHLSPGESFLVDFC-----SISYSDVHG 157
+ K AAF P+ + F L S + C ++ + +
Sbjct: 125 DGNLCRFYKHNAAFCYKLPD------NVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVC 178
Query: 158 GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFVARVKEET 214
G+ IG + + K G +V VT S +L+ K++GAD+ + E +AR E
Sbjct: 179 GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ 238
Query: 215 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
G +V ++C GA + Q + + G L ++G L ++ TV
Sbjct: 239 LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVG-------------LGSEMTTVPLLH 285
Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVG-------KVKPVIYKYLPLCEAAEAHQLMESSQ 326
R + K + N WP +A+ VKP++ PL +A EA + +
Sbjct: 286 AAIREVDIKGVFRY---CNTWP-VAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGL 341
Query: 327 HIGKIML 333
+ KIML
Sbjct: 342 GL-KIML 347
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 224
I++ G V SE K K LGAD +N + D +A K D IL+
Sbjct: 209 MGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA-----AHLKSFDFILN 263
Query: 225 CMGASYFQRNLGS-LNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 269
+ A + + + L DG + ++G + +L KR +
Sbjct: 264 TVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAI 309
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase
Gamma-2- Gamma-2 Isoform Complexed With
N-1-Methylheptylformamide Determined To 1.45 Angstrom
Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase
Gamma-2- Gamma-2 Isoform Complexed With
N-1-Methylheptylformamide Determined To 1.45 Angstrom
Resolution
Length = 374
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + R+D G+ +P P
Sbjct: 10 KAAVLWELKKP--FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLF 93
>pdb|2DUL|A Chain A, Crystal Structure Of Trna G26 Methyltransferase Trm1 In
Apo Form From Pyrococcus Horikoshii
pdb|2EJT|A Chain A, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S-Adenosyl- L-Methionine
pdb|2EJU|A Chain A, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S-Adenosyl- L-Homocystein
pdb|2YTZ|A Chain A, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S- Adenosyl-l-homocystein In The Orthorhombic
Crystal-lattice
pdb|2YTZ|B Chain B, Complex Structure Of Trm1 From Pyrococcus Horikoshii With
S- Adenosyl-l-homocystein In The Orthorhombic
Crystal-lattice
Length = 378
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGASY 230
C V + G + A DLG DV + YK F A VK + G + D L+ +G Y
Sbjct: 192 CHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDETLEKLGYIY 251
Query: 231 FQRNLGSLNID 241
F G ++
Sbjct: 252 FDDKTGKFELE 262
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + R+D G+ +P P
Sbjct: 10 KAAVLWEQKKP--FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-----VAPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + R+D G+ +P P
Sbjct: 10 KAAVLWEQKKP--FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-----VAPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + S+G+ V+ + GD+V L
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 176 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 223
R+F + + + GA INYK D V ++ + T GKGVD ++
Sbjct: 193 RIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVV 240
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 135/350 (38%), Gaps = 50/350 (14%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT----LQRKGSYPPPKGAS 58
++V+ PG L+L+ P+ +EVL++ + + +D R G++ K
Sbjct: 10 SLVVHGPGD---LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPX- 65
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGG----------GGYAEKVAVPAGQVLPV 108
G E SGT+ VG +V K GD+V G G Y ++ P
Sbjct: 66 -VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPD 124
Query: 109 PSGVS--LKDAAAF----PEVACTVWSTVFMTSHLSPGESFLVDFC-----SISYSDVHG 157
+ K AAF P+ + F L S + C ++ + +
Sbjct: 125 DGNLCRFYKHNAAFCYKLPD------NVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVC 178
Query: 158 GSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFVARVKEET 214
G+ IG + + K G +V VT S +L+ K++GAD+ + E +AR E
Sbjct: 179 GAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ 238
Query: 215 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
G +V ++C GA + Q + + G L ++G T + L A V G
Sbjct: 239 LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTT---VPLLHAAIREVDIKG 295
Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME 323
+ I K+V VKP++ PL +A EA + +
Sbjct: 296 VFRYCNTWPVAISXLASKSV-------NVKPLVTHRFPLEKALEAFETFK 338
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 147 FCSISYSDVHGGSS-------GIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVC 198
F +D+ GSS +G I K +G + GS + K GA
Sbjct: 156 FHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDI 215
Query: 199 INYKTEDFVARVKEETGGKGVDVILDCMGAS 229
+NYK V +V + T GKGVD ++ G S
Sbjct: 216 LNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 147 FCSISYSDVHGGSS-------GIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVC 198
F +D+ GSS +G I K +G + GS + K GA
Sbjct: 156 FHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDI 215
Query: 199 INYKTEDFVARVKEETGGKGVDVILDCMGAS 229
+NYK V +V + T GKGVD ++ G S
Sbjct: 216 LNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|B Chain B, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|C Chain C, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|D Chain D, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|E Chain E, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|F Chain F, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|G Chain G, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|H Chain H, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
Length = 265
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 168 QMGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVD 220
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D
Sbjct: 3 HMGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSD 61
Query: 221 VILDC 225
++L C
Sbjct: 62 IVLQC 66
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 14/109 (12%)
Query: 129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSS-------GIGTFAIQMGKCQGVRVFVTA 181
+ V +T ++ G F +D+ GSS +G I K +G +
Sbjct: 144 NAVMITDMMTTG------FHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGV 197
Query: 182 GSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
GS + K GA +NYK V +V + T GKGVD ++ G S
Sbjct: 198 GSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 14/109 (12%)
Query: 129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSS-------GIGTFAIQMGKCQGVRVFVTA 181
+ V +T ++ G F +D+ GSS +G I K +G +
Sbjct: 144 NAVMITDMMTTG------FHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGV 197
Query: 182 GSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
GS + K GA +NYK V +V + T GKGVD ++ G S
Sbjct: 198 GSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 66/183 (36%), Gaps = 40/183 (21%)
Query: 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 214
V GGS GIG Q G RVF+ A E C D + + A + E
Sbjct: 34 VTGGSRGIGQMIAQGLLEAGARVFICARDAE---ACADTATRLSAYGDCQAIPADLSSEA 90
Query: 215 GGKGVDVILDCMGASYFQRNLGSLNIDGRLFII----GTQGGAKTE------------LN 258
GA + LG L+ RL I+ GT GA E LN
Sbjct: 91 ------------GARRLAQALGELS--ARLDILVNNAGTSWGAALESYPVSGWEKVMQLN 136
Query: 259 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA 318
+TS+F+ + RS S EN A ++ N+ + + Y Y P A
Sbjct: 137 VTSVFSCIQQLLPLLRRSASAENPARVI-----NIGSVAGISAMGEQAYAYGP--SKAAL 189
Query: 319 HQL 321
HQL
Sbjct: 190 HQL 192
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + R D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICRTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLF 93
>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
pdb|3PJE|B Chain B, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
Length = 270
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 221
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 222 ILDC 225
+L C
Sbjct: 60 VLQC 63
>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
pdb|3PJD|B Chain B, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
Length = 270
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 221
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 222 ILDC 225
+L C
Sbjct: 60 VLQC 63
>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
pdb|3PJF|B Chain B, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
Length = 270
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 221
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 222 ILDC 225
+L C
Sbjct: 60 VLQC 63
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + R D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICRTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLF 93
>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|B Chain B, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|C Chain C, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|D Chain D, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
Length = 285
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 169 MGKCQGVRVFVTAGSEEK---LAVCKDL---GADVCINYKTEDFVARVKEETGGKGVDVI 222
MG +G R +T + E+ + K GA + Y T RV+E G G D++
Sbjct: 16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV 75
Query: 223 LDCMGA---------SYFQRNLGSLNI 240
+ C + + + N GSL+I
Sbjct: 76 VKCDVSLDEDIKNLKKFLEENWGSLDI 102
>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1C14|B Chain B, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1I2Z|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I2Z|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I30|A Chain A, E. Coli Enoyl Reductase +nad+sb385826
pdb|1I30|B Chain B, E. Coli Enoyl Reductase +nad+sb385826
pdb|1LX6|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LX6|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LXC|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1LXC|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1MFP|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|1MFP|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|2FHS|A Chain A, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
pdb|2FHS|B Chain B, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
Length = 262
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDV 221
MG G R+ VT G KL++ + GA++ Y+ + RV+E G D+
Sbjct: 1 MGFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 59
Query: 222 ILDC 225
+L C
Sbjct: 60 VLQC 63
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 50/268 (18%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V +P P L+ V P K EV IK+ A+ + +D+ K P S +P
Sbjct: 11 KAAVAWEPHKPLSLETITVAPP--KAHEVRIKILASGICGSDSSVLKEIIP-----SKFP 63
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEK--VAVPAGQ 104
G E G + S+G V+ K GD+V L + EK + G
Sbjct: 64 VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--------SPGESFLVDF-------CS 149
+ + S + + + + + ++ + + + +P ES L+ +
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAA 183
Query: 150 ISYSDVHGGSS-------GIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADVCINY 201
++ + V GS+ G+G AI K G + G+ ++K +LGA C+N
Sbjct: 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNP 243
Query: 202 KTED--FVARVKEETGGKGVDVILDCMG 227
K D + E+T G GVD ++C G
Sbjct: 244 KDYDKPIYEVICEKTNG-GVDYAVECAG 270
>pdb|2JGV|A Chain A, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2JGV|B Chain B, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2JGV|C Chain C, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2JGV|D Chain D, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase In Complex With Adp
pdb|2Q5R|A Chain A, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
pdb|2Q5R|B Chain B, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
pdb|2Q5R|C Chain C, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
pdb|2Q5R|D Chain D, Structure Of Apo Staphylococcus Aureus
D-Tagatose-6-Phosphate Kinase
Length = 330
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 203 TEDFVARVKEETGGKGVDVILDCMGAS 229
+D+ A++ E KGV VILDC GA+
Sbjct: 162 NQDYYAQIIERCQNKGVPVILDCSGAT 188
>pdb|2JG1|A Chain A, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
pdb|2JG1|B Chain B, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
pdb|2JG1|C Chain C, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
pdb|2JG1|D Chain D, Structure Of Staphylococcus Aureus D-Tagatose-6-Phosphate
Kinase With Cofactor And Substrate
Length = 330
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 203 TEDFVARVKEETGGKGVDVILDCMGAS 229
+D+ A++ E KGV VILDC GA+
Sbjct: 162 NQDYYAQIIERCQNKGVPVILDCSGAT 188
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol
Dehydrogenase (Adh4) In Complex With Nad And Zn
Length = 381
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA + + G P L ++EVE K EV I++ AT+L D + +P
Sbjct: 12 KAAIAWEAGKP--LCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFE----GLAFP 65
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
G E +G + S+G V+ K GD+V L
Sbjct: 66 VIVGHEAAGIVESIGPGVTNVKPGDKVIPL 95
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE---E 213
G G+G A+ K G R+ + EK K LGA C+N + D ++E E
Sbjct: 206 GLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPR--DLHKPIQEVIIE 263
Query: 214 TGGKGVDVILDCMGAS 229
GVD LDC G S
Sbjct: 264 LTKGGVDFALDCAGGS 279
>pdb|2QXT|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXT|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 4.5
pdb|2QXU|A Chain A, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|B Chain B, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|C Chain C, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|D Chain D, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|E Chain E, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|F Chain F, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|G Chain G, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
pdb|2QXU|H Chain H, Crystal Structure Analysis Of The Bacillus Subtilis Lipase
Crystallized At Ph 5.0
Length = 179
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 183 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 235
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 30 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 88
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 140/360 (38%), Gaps = 76/360 (21%)
Query: 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----RKGSYPPPKGAS 58
++V+ PG L+L+ P+ +EVL+K+ + + +D R G + K
Sbjct: 9 SLVVHGPGD---LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPM- 64
Query: 59 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKV---------------AVP-- 101
G E SGT++ VG V + GD+V G ++ A P
Sbjct: 65 -VLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPD 123
Query: 102 -----------AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
A +P V+ ++ A ++ + + + ++ G LV C
Sbjct: 124 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHAC--RRAGVTLGNKVLV--C-- 177
Query: 151 SYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTE--DFV 207
G+ IG + K G +V VT S +L+ K++GAD + E + +
Sbjct: 178 -------GAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEI 230
Query: 208 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 266
A+ E G +V ++C G + Q + + + G L ++G L ++
Sbjct: 231 AKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVG-------------LGSEM 277
Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWP-AIAV-----GKVKPVIYKYLPLCEAAEAHQ 320
+V +R + K + N WP AI++ VKP++ PL +A EA +
Sbjct: 278 TSVPLVHAATREVDIKGVFRY---CNTWPMAISMLASKSVNVKPLVTHRFPLEKALEAFE 334
>pdb|1I6W|A Chain A, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1I6W|B Chain B, The Crystal Structure Of Bacillus Subtilis Lipase: A
Minimal AlphaBETA HYDROLASE ENZYME
pdb|1ISP|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase At 1.3a
Resolution
pdb|1R4Z|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R4Z|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Rc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|A Chain A, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
pdb|1R50|B Chain B, Bacillus Subtilis Lipase A With Covalently Bound Sc-Ipg-
Phosphonate-Inhibitor
Length = 181
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 183 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 235
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|1T2N|A Chain A, Structure Of A Thermostable Triple Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 183 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 235
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|3D2A|A Chain A, Structure Of 1-17a4, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 183 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 235
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 106/270 (39%), Gaps = 53/270 (19%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++EVE K EV IK+ A + D G+ +P P
Sbjct: 10 KAAVLWELKKP--FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV----------CALLGG--GGYAEK--VAVPAGQ 104
G E +G + SVG+ V+ K GD+V C + Y K V+ P G
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT 122
Query: 105 VLPVPSGVSLKDA--------AAFPEVACTVWSTVFMTSHLSPGESFLVDFC-------- 148
+ S + + + F + + V SP E + C
Sbjct: 123 LQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 149 SISYSDVHGGSS-------GIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 200
+++ + V GS+ G+G AI K G R+ +++K A K+LGA CIN
Sbjct: 183 AVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 242
Query: 201 YKTEDF---VARVKEETGGKGVDVILDCMG 227
+D+ + V +E GVD + +G
Sbjct: 243 --PQDYKKPIQEVLKEMTDGGVDFSFEVIG 270
>pdb|1T4M|A Chain A, Structure Of A Thermostable Double Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 183 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGAS---YFQRNL 235
S +KL D NY FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|2FFH|A Chain A, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
pdb|2FFH|B Chain B, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
pdb|2FFH|C Chain C, The Signal Sequence Binding Protein Ffh From Thermus
Aquaticus
Length = 425
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 193 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 244
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 39 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 93
Query: 245 --------FIIGTQGGAKT 255
F++G QG KT
Sbjct: 94 VLKDRNLWFLVGLQGSGKT 112
>pdb|3QZU|A Chain A, Crystal Structure Of Bacillus Subtilis Lipase A 7-Fold
Mutant; The Outcome Of Directed Evolution Towards
Thermostability
pdb|3QZU|B Chain B, Crystal Structure Of Bacillus Subtilis Lipase A 7-Fold
Mutant; The Outcome Of Directed Evolution Towards
Thermostability
Length = 181
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 206 FVARVKEETGGKGVDVILDCMGAS---YFQRNL 235
FV +V +ETG K VD++ MG + Y+ +NL
Sbjct: 58 FVQKVLDETGAKKVDIVAHSMGGANTLYYIKNL 90
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Query: 29 EVLIKVEATALNRADTLQ-----RKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83
+VLI + + +D ++G YP PG E +G I VGK V ++K+GD
Sbjct: 31 DVLIDILYAGICHSDIHSAYSEWKEGIYPM------IPGHEIAGIIKEVGKGVKKFKIGD 84
Query: 84 QV 85
V
Sbjct: 85 VV 86
>pdb|2NG1|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
Length = 293
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 193 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 244
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 38 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 92
Query: 245 --------FIIGTQGGAKT 255
F++G QG KT
Sbjct: 93 VLKDRNLWFLVGLQGSGKT 111
>pdb|1RJ9|B Chain B, Structure Of The Heterodimer Of The Conserved Gtpase
Domains Signal Recognition Particle (Ffh) And Its
Receptor (Ftsy)
Length = 300
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 193 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 244
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 39 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 93
Query: 245 --------FIIGTQGGAKT 255
F++G QG KT
Sbjct: 94 VLKDRNLWFLVGLQGSGKT 112
>pdb|2C03|A Chain A, Gdp Complex Of Srp Gtpase Ffh Ng Domain
pdb|2C03|B Chain B, Gdp Complex Of Srp Gtpase Ffh Ng Domain
Length = 297
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 193 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 244
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 39 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 93
Query: 245 --------FIIGTQGGAKT 255
F++G QG KT
Sbjct: 94 VLKDRNLWFLVGLQGSGKT 112
>pdb|1FFH|A Chain A, N And Gtpase Domains Of The Signal Sequence Recognition
Protein Ffh From Thermus Aquaticus
Length = 294
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 193 LGADVCINYKTEDFVARVKEETGGKGV-------DVILDCMGASYFQRNLGSLNIDGRL- 244
+ ADV + T DFV RV+EE GK V +VIL A+ ++ +L + RL
Sbjct: 38 MDADVNLEV-TRDFVERVREEALGKQVLESLTPAEVIL----ATVYEALKEALGGEARLP 92
Query: 245 --------FIIGTQGGAKT 255
F++G QG KT
Sbjct: 93 VLKDRNLWFLVGLQGSGKT 111
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICHTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLF 93
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEE 213
G G+G A+ K G R+ +++K A K+LGA CIN +D+ + V +E
Sbjct: 199 GLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN--PQDYKKPIQEVLKE 256
Query: 214 TGGKGVDVILDCMG 227
GVD + +G
Sbjct: 257 MTDGGVDFSFEVIG 270
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSS-------GIGTFAIQMGKCQGVRVFVTA 181
+ V +T ++ G F +D+ GSS +G I K +G +
Sbjct: 144 NAVMITDMMTTG------FHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGV 197
Query: 182 GSEEK-LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
GS + K GA +NYK +V + T GKGVD ++ G S
Sbjct: 198 GSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGS 246
>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFG|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFH|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFH|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFI|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|C Chain C, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|D Chain D, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1QG6|A Chain A, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|B Chain B, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|C Chain C, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|D Chain D, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1D8A|A Chain A, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
pdb|1D8A|B Chain B, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
Length = 261
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 170 GKCQGVRVFVTAGSEEKLAVCKDL-------GADVCINYKTEDFVARVKEETGGKGVDVI 222
G G R+ VT G KL++ + GA++ Y+ + RV+E G D++
Sbjct: 1 GFLSGKRILVT-GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV 59
Query: 223 LDC 225
L C
Sbjct: 60 LQC 62
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213
+ G SSGIG+ ++ G +V ++ +EEKL K LG + NY E KEE
Sbjct: 19 ITGASSGIGSAIARLLHKLGSKVIISGSNEEKL---KSLGNALKDNYTIEVCNLANKEE 74
>pdb|3QMM|A Chain A, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3QMM|B Chain B, Structure Of 6b, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 171 KCQGVRVFVTA--GSEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILD 224
+G++ ++ + S +KL D NY FV +V +ETG K VD++
Sbjct: 18 NFEGIKSYLVSQGWSRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAH 76
Query: 225 CMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAA 272
MG + L+ I G N+ +L A RLT A
Sbjct: 77 SMGGA------------NTLYYIKYLDGGNKVANVVTLGGANRLTTDKA 113
>pdb|3D2C|A Chain A, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|B Chain B, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|C Chain C, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|D Chain D, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|E Chain E, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|F Chain F, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|G Chain G, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|H Chain H, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|I Chain I, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|J Chain J, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|K Chain K, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2C|L Chain L, Structure Of 4d3, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 171 KCQGVRVFVTA--GSEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILD 224
+G++ ++ + S +KL D NY FV +V +ETG K VD++
Sbjct: 18 NFEGIKSYLVSQGWSRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAH 76
Query: 225 CMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAA 272
MG + L+ I G N+ +L A RLT A
Sbjct: 77 SMGGA------------NTLYYIKYLDGGNKVANVVTLGGANRLTTDKA 113
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEE 213
G G+G A+ K G R+ +++K A K+LGA CIN +D+ + V +E
Sbjct: 199 GLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN--PQDYKKPIQEVLKE 256
Query: 214 TGGKGVDVILDCMG 227
GVD + +G
Sbjct: 257 MTDGGVDFSFEVIG 270
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
KA V+ + P ++ EV P K EV IK+ A + D G+ +P P
Sbjct: 10 KAAVLWEVKKPFSIEDVEVAPP--KAYEVRIKMVAVGICGTDDHVVSGNL-----VTPLP 62
Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCALL 89
G E +G + SVG+ V+ K GD+V L
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLF 93
>pdb|1EZW|A Chain A, Structure Of Coenzyme F420 Dependent
Tetrahydromethanopterin Reductase From Methanopyrus
Kandleri
Length = 349
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 288 EVEKNVWPAIAVGKVKPVIYKYL 310
E E V PA A+ +VK VIY+YL
Sbjct: 120 EAEDEVGPATAIREVKEVIYQYL 142
>pdb|3D2B|A Chain A, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
pdb|3D2B|B Chain B, Structure Of 2d9, A Thermostable Mutant Of Bacillus
Subtilis Lipase Obtained Through Directed Evolution
Length = 181
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 18/95 (18%)
Query: 183 SEEKLAVCKDLGADVCINYKT----EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
S +KL D NY FV +V +ETG K VD++ MG +
Sbjct: 32 SRDKLYAV-DFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGA--------- 81
Query: 239 NIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAA 272
L+ I G N+ +L A RLT A
Sbjct: 82 ---NTLYYIKYLDGGNKVANVVTLGGANRLTTGKA 113
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,135,122
Number of Sequences: 62578
Number of extensions: 433504
Number of successful extensions: 1379
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 224
length of query: 335
length of database: 14,973,337
effective HSP length: 99
effective length of query: 236
effective length of database: 8,778,115
effective search space: 2071635140
effective search space used: 2071635140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)