Query 019790
Match_columns 335
No_of_seqs 142 out of 1622
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 04:33:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019790.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019790hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 8E-56 1.7E-60 392.4 30.0 305 1-335 4-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 2.3E-54 4.9E-59 391.7 36.1 321 1-335 1-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 3.4E-50 7.3E-55 333.7 27.7 321 2-335 10-330 (336)
4 KOG0023 Alcohol dehydrogenase, 100.0 6.5E-47 1.4E-51 325.0 27.6 306 2-334 11-353 (360)
5 cd08281 liver_ADH_like1 Zinc-d 100.0 4.1E-46 8.8E-51 346.5 34.8 312 1-333 1-371 (371)
6 cd08291 ETR_like_1 2-enoyl thi 100.0 7E-46 1.5E-50 338.9 34.7 318 1-334 1-324 (324)
7 KOG0024 Sorbitol dehydrogenase 100.0 2E-46 4.4E-51 322.7 28.5 308 1-335 5-352 (354)
8 COG1062 AdhC Zn-dependent alco 100.0 9.4E-46 2E-50 321.4 28.4 309 1-334 3-365 (366)
9 cd08239 THR_DH_like L-threonin 100.0 5.4E-45 1.2E-49 335.1 34.4 306 1-335 1-339 (339)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 8.8E-45 1.9E-49 336.0 35.0 311 1-334 2-357 (358)
11 cd08292 ETR_like_2 2-enoyl thi 100.0 6.8E-44 1.5E-48 325.5 36.1 323 1-334 1-324 (324)
12 PLN02740 Alcohol dehydrogenase 100.0 9.3E-44 2E-48 331.6 35.2 311 1-334 11-380 (381)
13 KOG0025 Zn2+-binding dehydroge 100.0 8.3E-44 1.8E-48 300.8 28.0 313 2-324 21-340 (354)
14 PLN02586 probable cinnamyl alc 100.0 1.8E-43 3.9E-48 327.0 32.6 306 1-335 11-353 (360)
15 PLN02827 Alcohol dehydrogenase 100.0 4.3E-43 9.2E-48 326.5 35.2 308 1-335 13-376 (378)
16 PRK09880 L-idonate 5-dehydroge 100.0 4.4E-43 9.6E-48 322.8 33.8 301 1-335 5-343 (343)
17 TIGR02818 adh_III_F_hyde S-(hy 100.0 8.2E-43 1.8E-47 323.8 35.8 311 1-335 2-368 (368)
18 cd08301 alcohol_DH_plants Plan 100.0 1.8E-42 3.9E-47 321.9 35.8 309 1-333 3-368 (369)
19 cd08300 alcohol_DH_class_III c 100.0 2.1E-42 4.6E-47 321.2 35.5 310 1-334 3-368 (368)
20 PLN02178 cinnamyl-alcohol dehy 100.0 1.2E-42 2.7E-47 322.6 33.1 305 2-335 6-348 (375)
21 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.5E-42 3.2E-47 317.2 32.1 298 3-334 1-329 (329)
22 KOG0022 Alcohol dehydrogenase, 100.0 1.3E-42 2.8E-47 297.2 29.2 310 1-334 8-374 (375)
23 PLN03154 putative allyl alcoho 100.0 1.4E-41 3E-46 313.1 36.4 314 2-335 10-345 (348)
24 cd08277 liver_alcohol_DH_like 100.0 1E-41 2.2E-46 316.3 35.4 309 1-334 3-365 (365)
25 TIGR02819 fdhA_non_GSH formald 100.0 6E-42 1.3E-46 319.5 34.0 307 1-335 3-390 (393)
26 PRK10309 galactitol-1-phosphat 100.0 1.1E-41 2.3E-46 314.2 34.4 310 1-335 1-346 (347)
27 cd08233 butanediol_DH_like (2R 100.0 1.7E-41 3.8E-46 313.3 35.3 307 1-334 1-351 (351)
28 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-41 2.3E-46 315.1 33.9 304 1-335 10-350 (357)
29 cd08295 double_bond_reductase_ 100.0 1.6E-41 3.4E-46 311.9 34.6 314 2-335 9-338 (338)
30 cd08290 ETR 2-enoyl thioester 100.0 2.7E-41 5.9E-46 310.6 34.7 324 1-335 1-341 (341)
31 PTZ00354 alcohol dehydrogenase 100.0 8.8E-41 1.9E-45 306.0 37.3 324 1-334 2-327 (334)
32 cd08244 MDR_enoyl_red Possible 100.0 1.3E-40 2.8E-45 303.7 38.1 320 1-335 1-324 (324)
33 TIGR03201 dearomat_had 6-hydro 100.0 1.7E-41 3.8E-46 312.9 32.6 305 4-335 2-349 (349)
34 cd08294 leukotriene_B4_DH_like 100.0 1E-40 2.3E-45 305.2 36.2 309 1-335 3-329 (329)
35 cd08230 glucose_DH Glucose deh 100.0 2.6E-41 5.7E-46 312.5 31.5 302 1-335 1-355 (355)
36 cd08293 PTGR2 Prostaglandin re 100.0 1.2E-40 2.6E-45 306.9 35.2 306 12-335 20-345 (345)
37 cd08238 sorbose_phosphate_red 100.0 6.7E-41 1.4E-45 315.1 33.9 311 1-335 3-368 (410)
38 cd08231 MDR_TM0436_like Hypoth 100.0 1.8E-40 3.9E-45 307.6 35.2 309 2-335 2-361 (361)
39 TIGR02825 B4_12hDH leukotriene 100.0 1.5E-40 3.2E-45 303.9 33.9 301 9-334 13-325 (325)
40 TIGR01202 bchC 2-desacetyl-2-h 100.0 5E-41 1.1E-45 304.5 29.8 291 1-334 2-308 (308)
41 cd08296 CAD_like Cinnamyl alco 100.0 4E-40 8.6E-45 302.1 34.3 304 1-334 1-333 (333)
42 cd05284 arabinose_DH_like D-ar 100.0 5.9E-40 1.3E-44 301.7 34.0 308 1-335 1-340 (340)
43 cd08274 MDR9 Medium chain dehy 100.0 8E-40 1.7E-44 301.9 34.4 311 1-335 1-350 (350)
44 cd05282 ETR_like 2-enoyl thioe 100.0 1.2E-39 2.7E-44 297.1 34.5 320 5-334 2-323 (323)
45 PRK10754 quinone oxidoreductas 100.0 1.7E-39 3.7E-44 297.0 35.1 322 1-335 2-327 (327)
46 COG1063 Tdh Threonine dehydrog 100.0 9.9E-40 2.2E-44 299.7 33.4 310 1-335 1-350 (350)
47 cd08237 ribitol-5-phosphate_DH 100.0 3.9E-40 8.4E-45 302.8 30.3 293 2-335 4-339 (341)
48 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.6E-39 3.5E-44 298.2 33.9 316 2-334 1-334 (336)
49 cd05276 p53_inducible_oxidored 100.0 4.8E-39 1E-43 292.1 35.9 323 1-333 1-323 (323)
50 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 4.5E-39 9.8E-44 293.7 35.8 316 1-335 1-325 (325)
51 cd08246 crotonyl_coA_red croto 100.0 2.5E-39 5.5E-44 303.2 34.3 313 1-333 13-391 (393)
52 cd08297 CAD3 Cinnamyl alcohol 100.0 9.9E-39 2.1E-43 293.7 35.3 312 1-335 1-341 (341)
53 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.1E-38 2.3E-43 296.4 35.2 310 1-334 1-367 (367)
54 cd08285 NADP_ADH NADP(H)-depen 100.0 1.2E-38 2.6E-43 294.3 35.1 310 1-335 1-351 (351)
55 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.4E-38 2.9E-43 293.9 34.7 310 1-335 1-350 (350)
56 cd08270 MDR4 Medium chain dehy 100.0 2.1E-38 4.5E-43 286.9 35.2 303 1-335 1-305 (305)
57 cd08283 FDH_like_1 Glutathione 100.0 1.4E-38 3E-43 297.3 34.9 309 1-335 1-386 (386)
58 cd08289 MDR_yhfp_like Yhfp put 100.0 1.5E-38 3.2E-43 290.6 34.2 317 1-335 1-326 (326)
59 cd08278 benzyl_alcohol_DH Benz 100.0 2.7E-38 5.9E-43 293.3 35.9 310 1-334 3-365 (365)
60 cd08276 MDR7 Medium chain dehy 100.0 5.5E-38 1.2E-42 287.6 37.2 313 1-334 1-335 (336)
61 cd08250 Mgc45594_like Mgc45594 100.0 3.4E-38 7.4E-43 288.6 35.5 314 1-334 2-329 (329)
62 TIGR02823 oxido_YhdH putative 100.0 4.2E-38 9.2E-43 287.3 35.2 313 2-334 1-322 (323)
63 cd05278 FDH_like Formaldehyde 100.0 2.6E-38 5.5E-43 291.5 33.9 309 1-335 1-347 (347)
64 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.6E-38 7.7E-43 290.5 34.7 309 1-334 1-344 (345)
65 TIGR01751 crot-CoA-red crotony 100.0 3.2E-38 6.8E-43 296.1 34.7 314 1-334 8-386 (398)
66 cd08253 zeta_crystallin Zeta-c 100.0 1.2E-37 2.5E-42 283.4 36.8 320 1-335 1-325 (325)
67 cd08279 Zn_ADH_class_III Class 100.0 6.8E-38 1.5E-42 290.6 35.6 310 1-332 1-362 (363)
68 TIGR02824 quinone_pig3 putativ 100.0 1.7E-37 3.7E-42 282.5 37.1 324 1-334 1-324 (325)
69 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.2E-37 2.5E-42 286.2 35.7 306 1-335 1-337 (337)
70 cd05286 QOR2 Quinone oxidoredu 100.0 2.3E-37 5E-42 280.7 36.6 320 2-335 1-320 (320)
71 PRK10083 putative oxidoreducta 100.0 9.8E-38 2.1E-42 286.8 34.3 304 1-335 1-337 (339)
72 KOG1198 Zinc-binding oxidoredu 100.0 1.8E-38 4E-43 288.0 28.9 319 2-335 7-345 (347)
73 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.6E-37 3.5E-42 284.9 34.5 310 1-335 1-338 (338)
74 cd08286 FDH_like_ADH2 formalde 100.0 3E-37 6.4E-42 284.4 35.8 308 1-335 1-345 (345)
75 cd08243 quinone_oxidoreductase 100.0 3.1E-37 6.6E-42 280.7 34.6 309 1-333 1-319 (320)
76 PRK09422 ethanol-active dehydr 100.0 2.4E-37 5.1E-42 284.1 34.1 304 1-334 1-335 (338)
77 cd08249 enoyl_reductase_like e 100.0 7.4E-38 1.6E-42 287.7 30.7 313 1-335 1-339 (339)
78 cd08266 Zn_ADH_like1 Alcohol d 100.0 4.1E-37 8.9E-42 282.1 35.6 315 1-335 1-342 (342)
79 PRK13771 putative alcohol dehy 100.0 1.5E-37 3.3E-42 284.9 32.0 305 1-335 1-333 (334)
80 cd08235 iditol_2_DH_like L-idi 100.0 5.5E-37 1.2E-41 282.3 35.6 306 1-334 1-343 (343)
81 cd08284 FDH_like_2 Glutathione 100.0 6E-37 1.3E-41 282.1 35.3 306 1-335 1-344 (344)
82 cd08272 MDR6 Medium chain dehy 100.0 7.5E-37 1.6E-41 278.5 35.6 318 1-334 1-325 (326)
83 cd08259 Zn_ADH5 Alcohol dehydr 100.0 4.6E-37 9.9E-42 281.2 34.2 305 1-334 1-332 (332)
84 cd08299 alcohol_DH_class_I_II_ 100.0 7.7E-37 1.7E-41 284.2 35.8 309 1-334 8-372 (373)
85 cd08288 MDR_yhdh Yhdh putative 100.0 9.5E-37 2.1E-41 278.4 35.6 315 1-335 1-324 (324)
86 cd08252 AL_MDR Arginate lyase 100.0 6E-37 1.3E-41 281.1 34.2 318 1-334 1-336 (336)
87 cd08256 Zn_ADH2 Alcohol dehydr 100.0 7.7E-37 1.7E-41 282.2 35.0 305 1-333 1-350 (350)
88 cd08268 MDR2 Medium chain dehy 100.0 2.2E-36 4.7E-41 275.6 37.3 323 1-335 1-328 (328)
89 cd05279 Zn_ADH1 Liver alcohol 100.0 1.2E-36 2.7E-41 282.2 34.7 307 2-333 2-364 (365)
90 cd05283 CAD1 Cinnamyl alcohol 100.0 6.5E-37 1.4E-41 281.2 32.3 301 2-334 1-337 (337)
91 cd08236 sugar_DH NAD(P)-depend 100.0 2E-36 4.4E-41 278.6 34.9 309 1-333 1-343 (343)
92 COG2130 Putative NADP-dependen 100.0 7.7E-37 1.7E-41 261.1 29.1 303 12-334 24-337 (340)
93 cd08282 PFDH_like Pseudomonas 100.0 2.1E-36 4.5E-41 281.7 34.1 305 1-335 1-375 (375)
94 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.2E-36 6.9E-41 277.0 33.7 306 1-334 1-341 (341)
95 PRK05396 tdh L-threonine 3-deh 100.0 6E-36 1.3E-40 275.2 34.0 308 1-335 1-340 (341)
96 cd08273 MDR8 Medium chain dehy 100.0 9.1E-36 2E-40 272.7 34.2 314 2-333 2-330 (331)
97 cd08242 MDR_like Medium chain 100.0 8.3E-36 1.8E-40 271.8 32.4 288 1-335 1-319 (319)
98 cd08271 MDR5 Medium chain dehy 100.0 3.4E-35 7.4E-40 267.8 36.4 319 1-335 1-325 (325)
99 cd08241 QOR1 Quinone oxidoredu 100.0 4.3E-35 9.4E-40 266.3 36.6 322 1-334 1-323 (323)
100 cd08287 FDH_like_ADH3 formalde 100.0 1.9E-35 4.1E-40 272.3 34.4 306 1-335 1-345 (345)
101 cd08234 threonine_DH_like L-th 100.0 1.8E-35 3.9E-40 271.2 33.6 301 1-333 1-333 (334)
102 cd05285 sorbitol_DH Sorbitol d 100.0 1.8E-35 4E-40 272.2 33.7 302 4-333 2-341 (343)
103 cd08264 Zn_ADH_like2 Alcohol d 100.0 1E-35 2.2E-40 271.8 31.2 297 1-331 1-324 (325)
104 cd05288 PGDH Prostaglandin deh 100.0 4.1E-35 8.9E-40 268.2 34.7 311 2-333 3-329 (329)
105 cd08248 RTN4I1 Human Reticulon 100.0 7.5E-36 1.6E-40 275.4 28.1 316 1-334 1-350 (350)
106 cd05281 TDH Threonine dehydrog 100.0 8.1E-35 1.8E-39 267.8 34.0 307 1-335 1-341 (341)
107 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1E-34 2.3E-39 263.4 34.1 300 13-333 5-311 (312)
108 cd08265 Zn_ADH3 Alcohol dehydr 100.0 9.1E-35 2E-39 271.5 34.3 296 15-333 39-383 (384)
109 cd08251 polyketide_synthase po 100.0 9E-35 1.9E-39 262.1 33.1 299 22-333 2-303 (303)
110 cd08275 MDR3 Medium chain dehy 100.0 4.5E-34 9.8E-39 261.7 36.6 320 2-335 1-337 (337)
111 cd08298 CAD2 Cinnamyl alcohol 100.0 1.1E-34 2.3E-39 265.5 32.1 298 1-333 1-329 (329)
112 TIGR00692 tdh L-threonine 3-de 100.0 2.3E-34 5E-39 264.6 33.6 302 7-335 5-340 (340)
113 cd08232 idonate-5-DH L-idonate 100.0 2.6E-34 5.6E-39 264.1 32.8 294 13-335 7-339 (339)
114 cd08247 AST1_like AST1 is a cy 100.0 2E-34 4.4E-39 266.2 32.1 318 1-334 1-351 (352)
115 PLN02702 L-idonate 5-dehydroge 100.0 5.4E-34 1.2E-38 264.5 34.0 298 13-335 27-364 (364)
116 cd05289 MDR_like_2 alcohol deh 100.0 4E-34 8.8E-39 258.5 31.9 304 1-333 1-309 (309)
117 cd08245 CAD Cinnamyl alcohol d 100.0 3.5E-34 7.6E-39 262.2 31.6 301 2-333 1-330 (330)
118 cd08258 Zn_ADH4 Alcohol dehydr 100.0 3.8E-34 8.3E-39 259.3 31.5 262 1-277 1-293 (306)
119 cd08267 MDR1 Medium chain dehy 100.0 5.5E-33 1.2E-37 252.6 31.2 306 5-333 2-319 (319)
120 cd05195 enoyl_red enoyl reduct 100.0 1.1E-32 2.5E-37 246.4 30.3 290 28-333 1-293 (293)
121 smart00829 PKS_ER Enoylreducta 100.0 4.2E-32 9.2E-37 242.5 30.1 284 32-333 2-288 (288)
122 TIGR03366 HpnZ_proposed putati 100.0 1.5E-31 3.2E-36 239.4 23.0 232 60-315 1-280 (280)
123 KOG1196 Predicted NAD-dependen 100.0 3.7E-30 8.1E-35 219.4 29.5 301 13-334 20-339 (343)
124 cd05188 MDR Medium chain reduc 100.0 2.8E-30 6.1E-35 229.1 27.6 237 29-277 1-261 (271)
125 KOG1202 Animal-type fatty acid 100.0 7.8E-31 1.7E-35 254.0 20.0 304 10-334 1424-1740(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 1.2E-27 2.6E-32 213.7 24.9 251 57-332 20-276 (277)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 2.5E-17 5.3E-22 130.1 13.6 116 161-276 1-117 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.7 1.9E-17 4.1E-22 126.6 8.3 82 27-108 1-109 (109)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 1.8E-14 3.9E-19 113.2 7.6 124 193-333 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 1.9E-10 4.2E-15 106.7 17.9 176 127-335 188-376 (413)
131 PRK09424 pntA NAD(P) transhydr 99.2 7.2E-10 1.6E-14 105.5 15.2 127 137-274 162-314 (509)
132 PRK11873 arsM arsenite S-adeno 98.3 5.2E-06 1.1E-10 73.9 9.5 167 135-332 73-258 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.2 1.5E-05 3.3E-10 76.0 11.6 105 138-253 162-289 (511)
134 PRK08306 dipicolinate synthase 98.2 0.00024 5.3E-09 63.9 18.7 110 139-271 151-261 (296)
135 PRK05476 S-adenosyl-L-homocyst 98.0 0.00013 2.8E-09 68.4 12.5 104 126-252 197-303 (425)
136 COG2518 Pcm Protein-L-isoaspar 97.8 0.0002 4.3E-09 60.1 10.0 116 113-248 48-169 (209)
137 TIGR00936 ahcY adenosylhomocys 97.8 0.0004 8.6E-09 64.8 12.6 102 127-251 181-285 (406)
138 TIGR00518 alaDH alanine dehydr 97.7 0.0013 2.9E-08 61.0 15.3 141 156-302 173-329 (370)
139 PLN02494 adenosylhomocysteinas 97.7 0.0004 8.7E-09 65.5 11.5 101 128-251 241-344 (477)
140 PRK00517 prmA ribosomal protei 97.7 0.0012 2.5E-08 58.1 13.2 140 78-250 66-215 (250)
141 PF11017 DUF2855: Protein of u 97.6 0.014 3.1E-07 52.3 19.2 172 55-251 28-234 (314)
142 TIGR02853 spore_dpaA dipicolin 97.5 0.0081 1.8E-07 53.8 16.9 94 139-252 150-244 (287)
143 COG3967 DltE Short-chain dehyd 97.5 0.00076 1.7E-08 56.0 8.4 77 139-227 4-87 (245)
144 PRK08324 short chain dehydroge 97.4 0.00087 1.9E-08 67.5 10.2 115 92-227 385-507 (681)
145 PRK12771 putative glutamate sy 97.4 0.00022 4.7E-09 70.3 5.0 96 136-247 133-252 (564)
146 PTZ00075 Adenosylhomocysteinas 97.2 0.0047 1E-07 58.5 12.2 100 129-251 242-344 (476)
147 COG0300 DltE Short-chain dehyd 97.2 0.0016 3.5E-08 57.0 8.4 81 138-228 4-94 (265)
148 COG2230 Cfa Cyclopropane fatty 97.2 0.0017 3.6E-08 57.3 8.5 106 125-251 58-179 (283)
149 cd05213 NAD_bind_Glutamyl_tRNA 97.2 0.0031 6.7E-08 57.2 9.8 107 104-231 140-251 (311)
150 PF13460 NAD_binding_10: NADH( 97.1 0.0066 1.4E-07 50.2 10.9 90 156-251 4-100 (183)
151 PRK05786 fabG 3-ketoacyl-(acyl 97.1 0.0059 1.3E-07 52.8 10.9 103 139-251 4-138 (238)
152 PRK12742 oxidoreductase; Provi 97.1 0.0091 2E-07 51.6 11.7 101 139-252 5-135 (237)
153 COG4221 Short-chain alcohol de 97.1 0.0039 8.5E-08 53.4 8.9 79 140-228 6-91 (246)
154 PRK11705 cyclopropane fatty ac 97.0 0.0059 1.3E-07 57.0 10.2 111 120-248 148-267 (383)
155 PRK06198 short chain dehydroge 97.0 0.054 1.2E-06 47.4 15.9 80 139-228 5-94 (260)
156 PF02353 CMAS: Mycolic acid cy 96.9 0.00076 1.6E-08 59.9 3.1 100 128-247 51-165 (273)
157 PRK06182 short chain dehydroge 96.8 0.015 3.2E-07 51.6 11.2 80 139-228 2-84 (273)
158 PRK05693 short chain dehydroge 96.8 0.01 2.2E-07 52.7 9.9 76 142-227 3-81 (274)
159 TIGR00406 prmA ribosomal prote 96.8 0.0089 1.9E-07 53.6 9.5 145 78-250 105-261 (288)
160 PRK05993 short chain dehydroge 96.8 0.011 2.4E-07 52.5 9.8 78 139-227 3-85 (277)
161 PRK07060 short chain dehydroge 96.7 0.015 3.2E-07 50.5 10.2 78 139-228 8-87 (245)
162 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.0035 7.5E-08 60.0 6.7 96 133-252 27-127 (450)
163 PRK06139 short chain dehydroge 96.7 0.0096 2.1E-07 54.6 9.1 79 139-227 6-93 (330)
164 PLN03209 translocon at the inn 96.7 0.019 4.1E-07 55.9 11.1 83 133-228 73-169 (576)
165 PF00670 AdoHcyase_NAD: S-aden 96.6 0.03 6.5E-07 45.2 10.3 110 128-263 10-122 (162)
166 PF01488 Shikimate_DH: Shikima 96.6 0.0097 2.1E-07 46.9 7.1 73 139-230 11-87 (135)
167 PRK08265 short chain dehydroge 96.6 0.028 6E-07 49.5 10.8 78 139-228 5-90 (261)
168 PRK12939 short chain dehydroge 96.5 0.028 6.1E-07 48.8 10.6 80 139-228 6-94 (250)
169 PRK00377 cbiT cobalt-precorrin 96.5 0.048 1E-06 46.0 11.5 99 133-246 34-143 (198)
170 PRK07806 short chain dehydroge 96.5 0.039 8.5E-07 47.9 11.4 101 139-249 5-135 (248)
171 PRK08177 short chain dehydroge 96.5 0.017 3.7E-07 49.6 8.9 73 156-228 7-81 (225)
172 PRK00045 hemA glutamyl-tRNA re 96.5 0.015 3.2E-07 55.2 8.8 143 59-230 90-254 (423)
173 KOG1205 Predicted dehydrogenas 96.4 0.04 8.6E-07 48.8 10.6 103 139-253 11-154 (282)
174 PRK13942 protein-L-isoaspartat 96.4 0.0078 1.7E-07 51.4 5.9 97 133-247 70-175 (212)
175 PRK07109 short chain dehydroge 96.3 0.04 8.6E-07 50.6 10.7 78 139-228 7-95 (334)
176 PF12847 Methyltransf_18: Meth 96.3 0.023 5E-07 42.8 7.6 92 139-247 1-110 (112)
177 PRK12829 short chain dehydroge 96.2 0.024 5.3E-07 49.7 8.3 81 136-228 7-96 (264)
178 PRK05872 short chain dehydroge 96.2 0.025 5.4E-07 50.9 8.5 78 139-228 8-95 (296)
179 PRK06953 short chain dehydroge 96.2 0.041 9E-07 47.0 9.5 73 156-228 7-80 (222)
180 COG0686 Ald Alanine dehydrogen 96.2 0.039 8.4E-07 49.0 9.0 92 156-253 174-273 (371)
181 PLN02780 ketoreductase/ oxidor 96.2 0.031 6.8E-07 51.0 9.0 79 139-227 52-141 (320)
182 TIGR03325 BphB_TodD cis-2,3-di 96.2 0.032 7E-07 49.1 8.9 79 139-227 4-88 (262)
183 TIGR00438 rrmJ cell division p 96.2 0.15 3.3E-06 42.5 12.5 99 134-248 27-146 (188)
184 PRK13944 protein-L-isoaspartat 96.1 0.043 9.2E-07 46.6 9.0 97 133-247 66-172 (205)
185 PRK08261 fabG 3-ketoacyl-(acyl 96.1 0.069 1.5E-06 51.1 11.4 79 139-227 209-293 (450)
186 PRK05866 short chain dehydroge 96.1 0.046 1E-06 49.1 9.7 80 139-228 39-127 (293)
187 PRK07831 short chain dehydroge 96.1 0.038 8.3E-07 48.5 8.9 82 137-228 14-107 (262)
188 PRK08017 oxidoreductase; Provi 96.0 0.043 9.2E-07 47.9 9.0 76 141-227 3-83 (256)
189 PRK06484 short chain dehydroge 96.0 0.061 1.3E-06 52.5 10.9 104 139-252 268-404 (520)
190 PF01135 PCMT: Protein-L-isoas 96.0 0.0019 4.1E-08 55.0 0.2 99 132-247 65-171 (209)
191 PRK06128 oxidoreductase; Provi 96.0 0.098 2.1E-06 47.1 11.4 102 139-252 54-195 (300)
192 PRK08339 short chain dehydroge 96.0 0.055 1.2E-06 47.7 9.4 80 139-228 7-95 (263)
193 PRK06200 2,3-dihydroxy-2,3-dih 96.0 0.04 8.6E-07 48.5 8.5 79 139-227 5-89 (263)
194 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.054 1.2E-06 47.0 9.3 79 139-227 4-91 (253)
195 PF02826 2-Hacid_dh_C: D-isome 95.9 0.059 1.3E-06 44.6 8.8 89 138-249 34-128 (178)
196 PRK07814 short chain dehydroge 95.9 0.043 9.4E-07 48.3 8.5 79 139-227 9-96 (263)
197 PRK06057 short chain dehydroge 95.9 0.048 1E-06 47.7 8.7 80 139-228 6-89 (255)
198 PRK07904 short chain dehydroge 95.9 0.065 1.4E-06 47.0 9.5 83 136-228 4-97 (253)
199 PRK06949 short chain dehydroge 95.9 0.05 1.1E-06 47.5 8.8 80 138-227 7-95 (258)
200 PRK07832 short chain dehydroge 95.9 0.18 3.9E-06 44.5 12.4 71 156-228 6-88 (272)
201 COG4122 Predicted O-methyltran 95.9 0.13 2.7E-06 44.0 10.7 102 133-247 53-165 (219)
202 PRK06196 oxidoreductase; Provi 95.9 0.049 1.1E-06 49.5 8.9 79 139-227 25-108 (315)
203 PRK09291 short chain dehydroge 95.8 0.068 1.5E-06 46.6 9.4 73 141-227 3-82 (257)
204 PRK07231 fabG 3-ketoacyl-(acyl 95.8 0.047 1E-06 47.4 8.3 80 139-228 4-91 (251)
205 COG2910 Putative NADH-flavin r 95.8 0.15 3.2E-06 42.0 10.3 91 156-252 6-108 (211)
206 PRK04148 hypothetical protein; 95.8 0.091 2E-06 41.1 8.8 82 138-238 15-97 (134)
207 PRK06194 hypothetical protein; 95.8 0.06 1.3E-06 48.0 9.2 79 140-228 6-93 (287)
208 PRK13943 protein-L-isoaspartat 95.8 0.14 2.9E-06 46.7 11.1 99 133-247 74-179 (322)
209 TIGR01832 kduD 2-deoxy-D-gluco 95.7 0.072 1.6E-06 46.3 9.1 80 139-228 4-90 (248)
210 PRK06180 short chain dehydroge 95.7 0.059 1.3E-06 47.9 8.7 79 140-228 4-88 (277)
211 TIGR01035 hemA glutamyl-tRNA r 95.7 0.12 2.6E-06 49.0 11.1 142 59-230 88-252 (417)
212 PRK13394 3-hydroxybutyrate deh 95.7 0.075 1.6E-06 46.5 9.1 78 139-228 6-94 (262)
213 PRK05854 short chain dehydroge 95.7 0.063 1.4E-06 48.7 8.8 77 139-227 13-102 (313)
214 PRK12367 short chain dehydroge 95.7 0.087 1.9E-06 46.0 9.3 75 139-228 13-89 (245)
215 PLN02781 Probable caffeoyl-CoA 95.7 0.13 2.8E-06 44.6 10.3 103 132-246 61-176 (234)
216 cd01080 NAD_bind_m-THF_DH_Cycl 95.7 0.13 2.8E-06 42.1 9.7 95 120-251 24-119 (168)
217 PRK00107 gidB 16S rRNA methylt 95.7 0.039 8.4E-07 46.1 6.7 96 136-248 42-145 (187)
218 TIGR00080 pimt protein-L-isoas 95.7 0.025 5.4E-07 48.4 5.7 97 133-247 71-176 (215)
219 PRK05867 short chain dehydroge 95.6 0.073 1.6E-06 46.5 8.8 77 139-227 8-95 (253)
220 PRK06500 short chain dehydroge 95.6 0.078 1.7E-06 46.0 9.0 78 139-228 5-90 (249)
221 PRK07890 short chain dehydroge 95.6 0.082 1.8E-06 46.2 9.1 78 139-228 4-92 (258)
222 PRK06841 short chain dehydroge 95.6 0.064 1.4E-06 46.8 8.4 78 139-228 14-99 (255)
223 PRK06720 hypothetical protein; 95.6 0.15 3.2E-06 41.9 9.9 40 139-188 15-54 (169)
224 PRK07576 short chain dehydroge 95.6 0.092 2E-06 46.3 9.3 79 139-227 8-95 (264)
225 PRK08267 short chain dehydroge 95.6 0.085 1.9E-06 46.2 9.0 78 141-228 2-87 (260)
226 PRK07825 short chain dehydroge 95.6 0.07 1.5E-06 47.2 8.5 77 140-228 5-88 (273)
227 PRK09072 short chain dehydroge 95.5 0.11 2.3E-06 45.7 9.6 80 139-228 4-90 (263)
228 PRK07453 protochlorophyllide o 95.5 0.08 1.7E-06 48.2 9.0 79 139-227 5-92 (322)
229 COG2264 PrmA Ribosomal protein 95.5 0.08 1.7E-06 47.3 8.5 148 79-251 109-266 (300)
230 PRK07478 short chain dehydroge 95.5 0.11 2.3E-06 45.4 9.5 78 139-228 5-93 (254)
231 PLN02476 O-methyltransferase 95.5 0.16 3.4E-06 45.2 10.3 104 131-246 110-226 (278)
232 PRK08628 short chain dehydroge 95.5 0.077 1.7E-06 46.4 8.6 79 139-227 6-92 (258)
233 cd01078 NAD_bind_H4MPT_DH NADP 95.5 0.67 1.5E-05 38.8 13.9 77 139-230 27-109 (194)
234 PRK12481 2-deoxy-D-gluconate 3 95.5 0.088 1.9E-06 46.0 8.8 79 139-227 7-92 (251)
235 PRK06181 short chain dehydroge 95.5 0.082 1.8E-06 46.4 8.6 78 141-228 2-88 (263)
236 PRK05653 fabG 3-ketoacyl-(acyl 95.5 0.098 2.1E-06 45.1 9.0 79 140-228 5-92 (246)
237 PRK07063 short chain dehydroge 95.4 0.11 2.3E-06 45.6 9.1 77 139-227 6-95 (260)
238 KOG1014 17 beta-hydroxysteroid 95.4 0.14 3.1E-06 45.5 9.5 81 138-228 47-136 (312)
239 PRK06172 short chain dehydroge 95.4 0.097 2.1E-06 45.6 8.7 78 139-228 6-94 (253)
240 PRK07062 short chain dehydroge 95.4 0.093 2E-06 46.1 8.6 78 139-228 7-97 (265)
241 PRK14175 bifunctional 5,10-met 95.4 0.16 3.6E-06 45.1 9.9 96 120-251 138-233 (286)
242 PRK08213 gluconate 5-dehydroge 95.4 0.12 2.6E-06 45.3 9.2 78 139-228 11-99 (259)
243 PLN02589 caffeoyl-CoA O-methyl 95.3 0.23 5E-06 43.4 10.6 102 133-246 73-188 (247)
244 PRK06484 short chain dehydroge 95.3 0.087 1.9E-06 51.4 8.9 80 139-228 4-89 (520)
245 PRK07523 gluconate 5-dehydroge 95.3 0.11 2.5E-06 45.3 8.9 80 139-228 9-97 (255)
246 PRK10538 malonic semialdehyde 95.3 0.11 2.4E-06 45.2 8.7 73 156-228 6-84 (248)
247 PRK06138 short chain dehydroge 95.3 0.11 2.4E-06 45.1 8.8 78 139-228 4-91 (252)
248 PRK12826 3-ketoacyl-(acyl-carr 95.3 0.11 2.3E-06 45.1 8.7 40 139-188 5-44 (251)
249 PRK12937 short chain dehydroge 95.3 0.28 6E-06 42.4 11.2 36 139-184 4-39 (245)
250 TIGR02469 CbiT precorrin-6Y C5 95.3 0.35 7.6E-06 36.8 10.6 98 133-247 13-121 (124)
251 PRK05876 short chain dehydroge 95.3 0.11 2.3E-06 46.3 8.6 77 139-227 5-92 (275)
252 KOG0725 Reductases with broad 95.3 0.071 1.5E-06 47.3 7.3 81 138-228 6-99 (270)
253 PRK06125 short chain dehydroge 95.2 0.21 4.6E-06 43.7 10.4 78 139-228 6-91 (259)
254 PRK06077 fabG 3-ketoacyl-(acyl 95.2 0.28 6E-06 42.6 11.0 101 140-252 6-144 (252)
255 PRK07677 short chain dehydroge 95.2 0.13 2.9E-06 44.8 8.9 78 140-227 1-87 (252)
256 PRK07067 sorbitol dehydrogenas 95.2 0.14 3E-06 44.8 9.0 76 140-227 6-89 (257)
257 PRK06114 short chain dehydroge 95.2 0.13 2.9E-06 44.9 8.8 78 139-228 7-96 (254)
258 PRK06079 enoyl-(acyl carrier p 95.1 0.1 2.2E-06 45.6 8.1 77 139-227 6-92 (252)
259 PRK09242 tropinone reductase; 95.1 0.14 3.1E-06 44.7 9.0 78 139-228 8-98 (257)
260 PF01262 AlaDh_PNT_C: Alanine 95.1 0.093 2E-06 43.0 7.3 94 156-252 26-143 (168)
261 PRK05884 short chain dehydroge 95.1 0.14 3E-06 44.0 8.6 71 156-227 6-78 (223)
262 PRK07024 short chain dehydroge 95.1 0.15 3.3E-06 44.6 9.1 77 141-227 3-87 (257)
263 COG2226 UbiE Methylase involve 95.1 0.18 4E-06 43.6 9.2 102 133-252 45-160 (238)
264 PRK07774 short chain dehydroge 95.1 0.16 3.4E-06 44.1 9.1 77 139-227 5-92 (250)
265 PRK06197 short chain dehydroge 95.1 0.15 3.2E-06 46.1 9.2 41 139-189 15-55 (306)
266 PRK08264 short chain dehydroge 95.1 0.18 3.9E-06 43.5 9.4 75 139-228 5-83 (238)
267 PRK03369 murD UDP-N-acetylmura 95.1 0.07 1.5E-06 51.7 7.4 73 136-228 8-80 (488)
268 PRK06101 short chain dehydroge 95.1 0.12 2.7E-06 44.7 8.3 71 156-227 7-80 (240)
269 PRK08862 short chain dehydroge 95.1 0.095 2.1E-06 45.2 7.5 78 139-227 4-92 (227)
270 PRK08277 D-mannonate oxidoredu 95.1 0.15 3.2E-06 45.2 9.0 79 139-227 9-96 (278)
271 COG2519 GCD14 tRNA(1-methylade 95.1 0.12 2.5E-06 44.8 7.8 101 132-248 87-195 (256)
272 PRK12823 benD 1,6-dihydroxycyc 95.1 0.12 2.6E-06 45.3 8.3 79 139-227 7-93 (260)
273 PRK11207 tellurite resistance 95.1 0.08 1.7E-06 44.6 6.8 96 135-248 26-134 (197)
274 PRK08594 enoyl-(acyl carrier p 95.0 0.26 5.7E-06 43.2 10.4 79 139-227 6-96 (257)
275 PRK05875 short chain dehydroge 95.0 0.13 2.8E-06 45.5 8.5 41 139-189 6-46 (276)
276 PRK08589 short chain dehydroge 95.0 0.12 2.6E-06 45.8 8.3 77 139-227 5-91 (272)
277 PRK06482 short chain dehydroge 95.0 0.16 3.5E-06 44.9 9.1 78 141-228 3-86 (276)
278 PRK08226 short chain dehydroge 95.0 0.16 3.5E-06 44.5 9.0 77 139-227 5-91 (263)
279 PRK08643 acetoin reductase; Va 95.0 0.16 3.5E-06 44.3 8.9 77 140-228 2-89 (256)
280 PRK07326 short chain dehydroge 95.0 0.12 2.6E-06 44.4 8.0 80 139-228 5-92 (237)
281 PRK08085 gluconate 5-dehydroge 95.0 0.17 3.6E-06 44.2 9.0 78 139-228 8-96 (254)
282 PRK07454 short chain dehydroge 95.0 0.19 4.2E-06 43.3 9.3 80 139-228 5-93 (241)
283 PRK05717 oxidoreductase; Valid 95.0 0.18 3.9E-06 44.1 9.1 80 139-228 9-94 (255)
284 PRK07097 gluconate 5-dehydroge 94.9 0.18 3.8E-06 44.4 9.0 78 139-228 9-97 (265)
285 PRK08993 2-deoxy-D-gluconate 3 94.9 0.18 3.9E-06 44.0 8.9 78 139-228 9-95 (253)
286 PRK12828 short chain dehydroge 94.9 0.13 2.7E-06 44.2 7.8 78 139-228 6-92 (239)
287 PRK05650 short chain dehydroge 94.9 0.17 3.7E-06 44.6 8.8 73 156-228 6-87 (270)
288 PRK07666 fabG 3-ketoacyl-(acyl 94.9 0.21 4.5E-06 43.1 9.2 79 140-228 7-94 (239)
289 PRK08703 short chain dehydroge 94.9 0.13 2.7E-06 44.5 7.8 79 139-228 5-97 (239)
290 PRK08303 short chain dehydroge 94.9 0.19 4.2E-06 45.4 9.2 35 139-183 7-41 (305)
291 PRK06505 enoyl-(acyl carrier p 94.8 0.23 5E-06 44.0 9.5 77 139-227 6-94 (271)
292 CHL00194 ycf39 Ycf39; Provisio 94.8 0.16 3.4E-06 46.2 8.6 72 142-228 2-74 (317)
293 PRK07856 short chain dehydroge 94.8 0.14 2.9E-06 44.7 7.9 38 139-186 5-42 (252)
294 PRK06935 2-deoxy-D-gluconate 3 94.8 0.18 4E-06 44.1 8.8 77 139-228 14-101 (258)
295 PRK06179 short chain dehydroge 94.8 0.077 1.7E-06 46.8 6.4 77 140-228 4-83 (270)
296 PRK09186 flagellin modificatio 94.8 0.2 4.3E-06 43.6 8.9 79 139-227 3-92 (256)
297 PRK12429 3-hydroxybutyrate deh 94.8 0.21 4.5E-06 43.5 9.1 77 139-227 3-90 (258)
298 PRK07074 short chain dehydroge 94.8 0.22 4.7E-06 43.5 9.1 79 140-228 2-87 (257)
299 PRK08340 glucose-1-dehydrogena 94.8 0.16 3.4E-06 44.6 8.2 73 156-228 6-86 (259)
300 PRK07035 short chain dehydroge 94.8 0.21 4.5E-06 43.5 8.9 76 140-227 8-94 (252)
301 PRK07502 cyclohexadienyl dehyd 94.8 0.25 5.4E-06 44.7 9.7 84 156-249 12-101 (307)
302 PTZ00098 phosphoethanolamine N 94.7 0.12 2.6E-06 45.7 7.4 101 132-249 45-157 (263)
303 PRK14103 trans-aconitate 2-met 94.7 0.39 8.5E-06 42.1 10.5 95 133-247 23-125 (255)
304 COG1748 LYS9 Saccharopine dehy 94.7 0.17 3.7E-06 47.0 8.3 87 156-248 7-99 (389)
305 PRK07424 bifunctional sterol d 94.7 0.25 5.4E-06 46.5 9.6 76 139-227 177-254 (406)
306 PRK08263 short chain dehydroge 94.6 0.23 5E-06 43.9 9.1 79 140-228 3-87 (275)
307 PLN02253 xanthoxin dehydrogena 94.6 0.2 4.4E-06 44.4 8.7 78 139-228 17-104 (280)
308 PRK12747 short chain dehydroge 94.6 0.61 1.3E-05 40.5 11.6 104 139-252 3-148 (252)
309 PLN00016 RNA-binding protein; 94.6 0.19 4.2E-06 46.8 8.9 96 140-250 52-166 (378)
310 PF01596 Methyltransf_3: O-met 94.6 0.053 1.1E-06 46.0 4.5 101 134-246 40-153 (205)
311 COG2242 CobL Precorrin-6B meth 94.6 0.12 2.6E-06 42.6 6.4 100 133-248 28-135 (187)
312 PRK07791 short chain dehydroge 94.6 0.27 5.8E-06 44.0 9.4 37 138-184 4-40 (286)
313 KOG1210 Predicted 3-ketosphing 94.6 0.26 5.7E-06 43.9 8.9 83 137-229 30-123 (331)
314 TIGR03206 benzo_BadH 2-hydroxy 94.6 0.24 5.3E-06 42.9 9.0 79 139-227 2-89 (250)
315 PRK06398 aldose dehydrogenase; 94.5 0.03 6.4E-07 49.2 3.0 74 139-227 5-81 (258)
316 PRK06124 gluconate 5-dehydroge 94.5 0.19 4E-06 43.9 8.1 80 139-228 10-98 (256)
317 PRK12936 3-ketoacyl-(acyl-carr 94.5 0.27 5.8E-06 42.4 9.0 78 139-228 5-90 (245)
318 PRK12384 sorbitol-6-phosphate 94.5 0.25 5.4E-06 43.2 8.8 41 140-190 2-42 (259)
319 PRK14192 bifunctional 5,10-met 94.5 0.46 9.9E-06 42.5 10.4 78 138-251 157-234 (283)
320 PRK06113 7-alpha-hydroxysteroi 94.5 0.27 5.7E-06 43.0 8.9 77 139-227 10-97 (255)
321 PRK07985 oxidoreductase; Provi 94.4 0.53 1.1E-05 42.2 11.0 35 139-183 48-82 (294)
322 PRK08278 short chain dehydroge 94.4 0.22 4.8E-06 44.1 8.4 37 139-185 5-41 (273)
323 PRK12743 oxidoreductase; Provi 94.4 0.26 5.7E-06 43.0 8.8 76 140-227 2-89 (256)
324 PF06325 PrmA: Ribosomal prote 94.4 0.2 4.4E-06 44.9 7.9 145 79-253 108-264 (295)
325 PRK14967 putative methyltransf 94.3 1 2.3E-05 38.6 12.2 95 134-247 31-158 (223)
326 PRK08251 short chain dehydroge 94.3 0.34 7.5E-06 41.9 9.3 78 140-227 2-90 (248)
327 TIGR00507 aroE shikimate 5-deh 94.3 0.41 8.8E-06 42.5 9.9 91 137-248 114-214 (270)
328 TIGR03840 TMPT_Se_Te thiopurin 94.3 0.44 9.5E-06 40.7 9.6 100 138-250 33-154 (213)
329 PRK07577 short chain dehydroge 94.3 0.18 4E-06 43.2 7.5 74 140-228 3-78 (234)
330 PLN00141 Tic62-NAD(P)-related 94.3 0.33 7.1E-06 42.4 9.1 77 139-228 16-95 (251)
331 PLN03075 nicotianamine synthas 94.3 0.25 5.5E-06 44.2 8.3 96 139-248 123-233 (296)
332 PRK00258 aroE shikimate 5-dehy 94.3 0.37 8E-06 43.0 9.4 92 138-247 121-220 (278)
333 PF03807 F420_oxidored: NADP o 94.3 0.3 6.5E-06 35.6 7.5 81 156-247 5-93 (96)
334 PRK07533 enoyl-(acyl carrier p 94.2 0.32 6.9E-06 42.7 8.9 77 139-227 9-97 (258)
335 COG0169 AroE Shikimate 5-dehyd 94.2 0.24 5.3E-06 44.1 8.1 43 139-192 125-168 (283)
336 KOG1208 Dehydrogenases with di 94.2 0.23 4.9E-06 45.1 8.0 103 138-252 33-174 (314)
337 PLN02657 3,8-divinyl protochlo 94.2 0.21 4.6E-06 46.8 8.2 80 136-228 56-146 (390)
338 PRK06603 enoyl-(acyl carrier p 94.2 0.33 7.2E-06 42.7 9.0 78 138-227 6-95 (260)
339 PRK13940 glutamyl-tRNA reducta 94.2 0.49 1.1E-05 44.7 10.4 74 138-230 179-254 (414)
340 PRK07792 fabG 3-ketoacyl-(acyl 94.2 0.34 7.3E-06 43.8 9.2 80 139-228 11-99 (306)
341 PRK08415 enoyl-(acyl carrier p 94.2 0.29 6.3E-06 43.5 8.6 103 139-251 4-146 (274)
342 TIGR02622 CDP_4_6_dhtase CDP-g 94.2 0.24 5.3E-06 45.6 8.4 78 139-227 3-84 (349)
343 KOG1252 Cystathionine beta-syn 94.2 0.76 1.6E-05 41.4 10.8 58 133-200 96-156 (362)
344 COG3288 PntA NAD/NADP transhyd 94.2 1.3 2.9E-05 39.5 12.2 147 138-297 162-333 (356)
345 TIGR00715 precor6x_red precorr 94.1 0.15 3.4E-06 44.7 6.6 74 142-228 2-75 (256)
346 PLN02244 tocopherol O-methyltr 94.1 0.091 2E-06 48.3 5.4 94 138-249 117-224 (340)
347 PRK06914 short chain dehydroge 94.1 0.33 7.1E-06 43.0 8.9 79 140-228 3-91 (280)
348 PRK08618 ornithine cyclodeamin 94.1 0.89 1.9E-05 41.5 11.7 101 138-259 125-232 (325)
349 PRK14189 bifunctional 5,10-met 94.1 0.46 1E-05 42.3 9.4 96 120-251 138-233 (285)
350 PRK08690 enoyl-(acyl carrier p 94.0 0.46 9.9E-06 41.8 9.5 78 139-228 5-94 (261)
351 cd01065 NAD_bind_Shikimate_DH 94.0 0.54 1.2E-05 37.6 9.2 93 138-248 17-116 (155)
352 PF00106 adh_short: short chai 93.9 0.36 7.9E-06 38.9 8.2 73 156-228 6-90 (167)
353 PRK08219 short chain dehydroge 93.9 0.33 7.1E-06 41.3 8.3 76 141-228 4-81 (227)
354 PRK06719 precorrin-2 dehydroge 93.9 0.83 1.8E-05 37.0 10.0 87 139-246 12-98 (157)
355 PRK14191 bifunctional 5,10-met 93.9 0.63 1.4E-05 41.4 10.0 95 120-251 137-232 (285)
356 PRK06718 precorrin-2 dehydroge 93.9 1.2 2.6E-05 37.6 11.4 91 139-248 9-100 (202)
357 PRK08063 enoyl-(acyl carrier p 93.9 0.39 8.4E-06 41.6 8.8 80 139-228 3-92 (250)
358 PRK05557 fabG 3-ketoacyl-(acyl 93.9 0.4 8.7E-06 41.3 8.8 37 139-185 4-40 (248)
359 PRK07775 short chain dehydroge 93.9 0.43 9.2E-06 42.3 9.1 79 140-228 10-97 (274)
360 PRK08159 enoyl-(acyl carrier p 93.9 0.3 6.6E-06 43.3 8.1 81 137-227 7-97 (272)
361 PRK00312 pcm protein-L-isoaspa 93.8 0.18 3.9E-06 42.9 6.3 97 133-248 72-175 (212)
362 PRK05565 fabG 3-ketoacyl-(acyl 93.8 0.36 7.8E-06 41.6 8.3 41 140-190 5-46 (247)
363 PRK07984 enoyl-(acyl carrier p 93.8 0.33 7.3E-06 42.8 8.2 79 139-227 5-93 (262)
364 PRK06523 short chain dehydroge 93.8 0.16 3.5E-06 44.4 6.1 74 139-227 8-86 (260)
365 PRK06483 dihydromonapterin red 93.7 0.56 1.2E-05 40.3 9.4 79 140-228 2-84 (236)
366 PRK07102 short chain dehydroge 93.7 0.39 8.4E-06 41.5 8.4 40 141-190 2-41 (243)
367 PRK08220 2,3-dihydroxybenzoate 93.7 0.35 7.5E-06 42.0 8.2 36 139-184 7-42 (252)
368 TIGR02632 RhaD_aldol-ADH rhamn 93.7 0.35 7.5E-06 48.9 9.0 115 93-228 378-503 (676)
369 KOG1201 Hydroxysteroid 17-beta 93.7 0.32 6.8E-06 43.2 7.6 77 139-227 37-123 (300)
370 PF03435 Saccharop_dh: Sacchar 93.7 0.45 9.8E-06 44.5 9.3 88 156-246 4-96 (386)
371 PF13823 ADH_N_assoc: Alcohol 93.7 0.07 1.5E-06 27.9 2.1 22 1-25 1-22 (23)
372 PF02254 TrkA_N: TrkA-N domain 93.7 1.9 4.2E-05 32.4 11.3 88 156-247 4-95 (116)
373 PRK06701 short chain dehydroge 93.6 0.45 9.7E-06 42.6 8.9 36 139-184 45-80 (290)
374 PRK05855 short chain dehydroge 93.6 0.37 8.1E-06 47.4 9.1 78 139-228 314-402 (582)
375 PRK13255 thiopurine S-methyltr 93.6 0.42 9E-06 41.0 8.2 99 136-247 34-154 (218)
376 PRK12935 acetoacetyl-CoA reduc 93.6 0.5 1.1E-05 40.9 8.8 80 139-228 5-94 (247)
377 PRK12825 fabG 3-ketoacyl-(acyl 93.6 0.52 1.1E-05 40.5 9.0 36 140-185 6-41 (249)
378 PRK06463 fabG 3-ketoacyl-(acyl 93.5 0.46 1E-05 41.4 8.6 80 139-228 6-89 (255)
379 PRK12938 acetyacetyl-CoA reduc 93.5 0.34 7.4E-06 41.9 7.8 77 140-228 3-91 (246)
380 PRK07402 precorrin-6B methylas 93.5 1.6 3.5E-05 36.5 11.6 100 132-248 33-142 (196)
381 PRK07889 enoyl-(acyl carrier p 93.5 0.4 8.6E-06 42.0 8.2 80 139-228 6-95 (256)
382 PRK14618 NAD(P)H-dependent gly 93.5 0.81 1.7E-05 41.8 10.4 87 156-249 10-105 (328)
383 TIGR00477 tehB tellurite resis 93.5 0.24 5.2E-06 41.7 6.4 94 136-248 27-133 (195)
384 PRK10792 bifunctional 5,10-met 93.5 0.84 1.8E-05 40.6 10.0 94 120-250 139-233 (285)
385 COG2227 UbiG 2-polyprenyl-3-me 93.5 0.51 1.1E-05 40.6 8.2 93 138-247 58-160 (243)
386 PRK11036 putative S-adenosyl-L 93.4 0.38 8.2E-06 42.3 7.8 92 138-247 43-148 (255)
387 PRK12549 shikimate 5-dehydroge 93.4 0.94 2E-05 40.5 10.4 42 139-191 126-168 (284)
388 TIGR01963 PHB_DH 3-hydroxybuty 93.3 0.78 1.7E-05 39.7 9.7 75 141-227 2-87 (255)
389 TIGR01809 Shik-DH-AROM shikima 93.3 0.35 7.6E-06 43.2 7.5 75 139-229 124-201 (282)
390 TIGR01289 LPOR light-dependent 93.3 0.54 1.2E-05 42.6 8.9 78 140-227 3-90 (314)
391 PRK12550 shikimate 5-dehydroge 93.3 0.67 1.5E-05 41.2 9.1 69 136-228 118-188 (272)
392 PF02558 ApbA: Ketopantoate re 93.3 0.12 2.7E-06 41.2 4.1 89 156-249 4-102 (151)
393 cd01075 NAD_bind_Leu_Phe_Val_D 93.1 3.4 7.4E-05 34.8 12.9 80 138-239 26-107 (200)
394 PRK08936 glucose-1-dehydrogena 93.1 0.65 1.4E-05 40.6 8.9 36 139-184 6-41 (261)
395 PRK07370 enoyl-(acyl carrier p 93.1 0.4 8.7E-06 42.1 7.6 77 139-227 5-96 (258)
396 TIGR01318 gltD_gamma_fam gluta 93.1 0.39 8.5E-06 46.2 8.1 77 139-229 140-237 (467)
397 TIGR02415 23BDH acetoin reduct 93.1 0.56 1.2E-05 40.7 8.5 73 156-228 6-87 (254)
398 PRK08317 hypothetical protein; 93.1 1.1 2.5E-05 38.3 10.3 98 133-248 13-124 (241)
399 PLN02653 GDP-mannose 4,6-dehyd 93.0 0.29 6.3E-06 44.8 6.8 36 139-184 5-40 (340)
400 KOG1610 Corticosteroid 11-beta 93.0 1.7 3.8E-05 38.9 11.2 105 138-252 27-168 (322)
401 TIGR01470 cysG_Nterm siroheme 93.0 2.8 6.2E-05 35.5 12.3 91 139-248 8-100 (205)
402 PF01370 Epimerase: NAD depend 92.9 0.26 5.6E-06 42.2 6.0 70 156-228 4-75 (236)
403 PRK00811 spermidine synthase; 92.9 0.73 1.6E-05 41.2 9.0 95 139-247 76-190 (283)
404 PF08704 GCD14: tRNA methyltra 92.9 0.18 3.9E-06 44.0 4.9 104 131-249 32-147 (247)
405 PRK01683 trans-aconitate 2-met 92.9 1.2 2.6E-05 39.0 10.3 96 133-247 25-129 (258)
406 PLN02986 cinnamyl-alcohol dehy 92.9 0.49 1.1E-05 42.9 8.1 40 139-188 4-43 (322)
407 PRK08416 7-alpha-hydroxysteroi 92.9 0.7 1.5E-05 40.5 8.8 39 139-187 7-46 (260)
408 PF05368 NmrA: NmrA-like famil 92.9 0.62 1.3E-05 40.1 8.3 68 156-227 4-73 (233)
409 PRK07041 short chain dehydroge 92.9 0.88 1.9E-05 38.8 9.2 71 156-228 3-79 (230)
410 PRK12746 short chain dehydroge 92.8 0.76 1.7E-05 39.9 8.9 39 140-188 6-45 (254)
411 PLN02896 cinnamyl-alcohol dehy 92.8 0.96 2.1E-05 41.7 10.0 77 138-227 8-88 (353)
412 COG1179 Dinucleotide-utilizing 92.8 2.8 6E-05 36.2 11.6 95 156-252 36-157 (263)
413 PLN02233 ubiquinone biosynthes 92.8 1.2 2.7E-05 39.2 10.1 100 133-250 67-184 (261)
414 PF03446 NAD_binding_2: NAD bi 92.7 1.4 3E-05 35.8 9.7 82 156-249 7-95 (163)
415 TIGR02752 MenG_heptapren 2-hep 92.6 0.39 8.5E-06 41.3 6.7 98 133-248 39-151 (231)
416 PRK12548 shikimate 5-dehydroge 92.6 1.4 3.1E-05 39.4 10.5 35 139-184 125-160 (289)
417 PRK14176 bifunctional 5,10-met 92.6 1.4 3E-05 39.3 10.0 94 120-250 144-238 (287)
418 COG0031 CysK Cysteine synthase 92.6 1.3 2.8E-05 39.7 9.8 59 133-202 55-116 (300)
419 PLN02214 cinnamoyl-CoA reducta 92.6 0.91 2E-05 41.7 9.4 77 139-228 9-91 (342)
420 PRK12827 short chain dehydroge 92.5 0.91 2E-05 39.1 9.0 34 139-182 5-38 (249)
421 TIGR01214 rmlD dTDP-4-dehydror 92.5 0.37 8.1E-06 42.8 6.6 56 156-228 5-60 (287)
422 PRK08655 prephenate dehydrogen 92.5 0.67 1.5E-05 44.2 8.6 83 156-249 6-93 (437)
423 cd05212 NAD_bind_m-THF_DH_Cycl 92.5 1.3 2.8E-05 35.1 8.8 96 120-251 8-103 (140)
424 PRK12744 short chain dehydroge 92.4 0.88 1.9E-05 39.7 8.8 34 139-182 7-40 (257)
425 PRK14027 quinate/shikimate deh 92.4 1.8 3.9E-05 38.7 10.7 42 139-191 126-168 (283)
426 COG0569 TrkA K+ transport syst 92.4 1.1 2.3E-05 38.6 9.0 75 156-234 6-82 (225)
427 PRK09135 pteridine reductase; 92.4 0.92 2E-05 39.1 8.8 35 139-183 5-39 (249)
428 PF10727 Rossmann-like: Rossma 92.4 0.31 6.7E-06 37.9 5.1 80 156-247 16-102 (127)
429 COG0373 HemA Glutamyl-tRNA red 92.4 1.5 3.2E-05 41.2 10.4 94 138-251 176-277 (414)
430 PRK05599 hypothetical protein; 92.3 0.64 1.4E-05 40.4 7.7 70 156-228 6-87 (246)
431 PRK12809 putative oxidoreducta 92.3 0.48 1E-05 47.6 7.7 77 139-229 309-406 (639)
432 PRK07023 short chain dehydroge 92.3 0.56 1.2E-05 40.5 7.3 35 142-186 3-37 (243)
433 PRK08642 fabG 3-ketoacyl-(acyl 92.3 1 2.2E-05 39.0 8.9 77 140-227 5-90 (253)
434 PRK06997 enoyl-(acyl carrier p 92.2 0.56 1.2E-05 41.2 7.3 79 139-227 5-93 (260)
435 PRK07069 short chain dehydroge 92.2 0.81 1.8E-05 39.6 8.3 34 156-189 5-39 (251)
436 PRK12745 3-ketoacyl-(acyl-carr 92.2 0.72 1.6E-05 40.1 8.0 34 141-184 3-36 (256)
437 PRK07574 formate dehydrogenase 92.2 0.89 1.9E-05 42.5 8.8 89 139-249 191-285 (385)
438 PRK06940 short chain dehydroge 92.2 0.83 1.8E-05 40.5 8.4 71 156-228 8-86 (275)
439 PRK07201 short chain dehydroge 92.1 0.65 1.4E-05 46.7 8.5 78 140-227 371-457 (657)
440 PRK14188 bifunctional 5,10-met 92.1 1.6 3.5E-05 39.2 10.0 95 120-251 138-233 (296)
441 PRK07340 ornithine cyclodeamin 92.1 1.6 3.5E-05 39.5 10.1 101 138-261 123-230 (304)
442 PLN02989 cinnamyl-alcohol dehy 92.1 0.95 2.1E-05 41.1 8.8 39 139-187 4-42 (325)
443 cd05311 NAD_bind_2_malic_enz N 92.0 3.3 7.2E-05 35.7 11.6 90 138-248 23-128 (226)
444 TIGR03589 PseB UDP-N-acetylglu 92.0 1.2 2.6E-05 40.6 9.3 75 139-228 3-84 (324)
445 KOG1209 1-Acyl dihydroxyaceton 91.9 0.72 1.6E-05 39.0 6.9 78 140-228 7-91 (289)
446 PRK07417 arogenate dehydrogena 91.9 1.4 2.9E-05 39.3 9.4 65 156-231 6-70 (279)
447 PRK06171 sorbitol-6-phosphate 91.9 0.57 1.2E-05 41.1 7.0 76 139-227 8-86 (266)
448 TIGR01472 gmd GDP-mannose 4,6- 91.9 0.7 1.5E-05 42.4 7.8 33 142-184 2-34 (343)
449 TIGR01830 3oxo_ACP_reduc 3-oxo 91.9 0.8 1.7E-05 39.2 7.8 73 156-228 4-86 (239)
450 COG1052 LdhA Lactate dehydroge 91.9 1.8 3.9E-05 39.5 10.2 88 139-250 145-238 (324)
451 PF02882 THF_DHG_CYH_C: Tetrah 91.9 1.6 3.4E-05 35.4 8.8 98 119-252 15-112 (160)
452 PRK04457 spermidine synthase; 91.8 2.8 6.2E-05 37.0 11.2 95 138-247 65-176 (262)
453 TIGR00563 rsmB ribosomal RNA s 91.8 1.4 3E-05 41.9 9.9 99 134-248 233-368 (426)
454 TIGR01829 AcAcCoA_reduct aceto 91.8 0.85 1.8E-05 39.2 7.9 70 156-227 6-87 (242)
455 PRK09134 short chain dehydroge 91.8 1.2 2.7E-05 38.7 9.0 77 139-227 8-96 (258)
456 COG0334 GdhA Glutamate dehydro 91.7 4 8.6E-05 38.1 12.2 60 113-185 181-241 (411)
457 PRK03659 glutathione-regulated 91.6 1.7 3.6E-05 43.4 10.6 89 156-248 406-498 (601)
458 PRK05708 2-dehydropantoate 2-r 91.6 0.9 2E-05 41.1 8.0 90 156-248 8-104 (305)
459 PF02670 DXP_reductoisom: 1-de 91.6 2 4.3E-05 33.4 8.7 91 156-246 4-119 (129)
460 PLN02928 oxidoreductase family 91.5 2.2 4.8E-05 39.3 10.6 96 139-250 158-264 (347)
461 PRK08287 cobalt-precorrin-6Y C 91.5 3.6 7.8E-05 34.1 11.1 95 133-247 25-130 (187)
462 PRK14194 bifunctional 5,10-met 91.5 1.5 3.3E-05 39.4 9.1 94 120-250 139-233 (301)
463 PRK14169 bifunctional 5,10-met 91.5 2.2 4.7E-05 38.0 10.0 96 120-251 136-231 (282)
464 PF05724 TPMT: Thiopurine S-me 91.5 0.54 1.2E-05 40.3 6.1 100 135-247 33-154 (218)
465 PRK14177 bifunctional 5,10-met 91.4 3.4 7.3E-05 36.8 11.1 96 120-251 139-234 (284)
466 PRK10669 putative cation:proto 91.4 1.9 4.2E-05 42.5 10.7 88 156-247 423-514 (558)
467 PRK06522 2-dehydropantoate 2-r 91.4 0.45 9.7E-06 42.8 5.8 88 156-248 6-100 (304)
468 PLN02240 UDP-glucose 4-epimera 91.4 1.1 2.3E-05 41.2 8.4 34 140-183 5-38 (352)
469 TIGR03649 ergot_EASG ergot alk 91.3 0.74 1.6E-05 40.9 7.1 91 156-249 5-105 (285)
470 PRK14190 bifunctional 5,10-met 91.3 2.3 4.9E-05 37.9 9.9 96 120-251 138-233 (284)
471 PRK03562 glutathione-regulated 91.3 2 4.3E-05 43.0 10.7 88 156-247 406-497 (621)
472 PLN02516 methylenetetrahydrofo 91.3 2.2 4.8E-05 38.2 9.9 97 119-251 146-242 (299)
473 PRK12769 putative oxidoreducta 91.3 0.58 1.3E-05 47.1 7.0 75 139-228 326-422 (654)
474 PRK04266 fibrillarin; Provisio 91.3 4.3 9.3E-05 35.0 11.5 100 133-247 66-175 (226)
475 PRK06550 fabG 3-ketoacyl-(acyl 91.2 1.1 2.4E-05 38.4 7.9 72 139-227 4-76 (235)
476 PRK13243 glyoxylate reductase; 91.2 2 4.3E-05 39.4 9.9 87 139-249 149-241 (333)
477 PLN03139 formate dehydrogenase 91.2 1.1 2.4E-05 41.9 8.2 89 139-249 198-292 (386)
478 PRK14173 bifunctional 5,10-met 91.1 2.1 4.5E-05 38.2 9.5 95 120-251 135-230 (287)
479 PRK08945 putative oxoacyl-(acy 91.1 0.63 1.4E-05 40.3 6.3 44 137-190 9-52 (247)
480 PLN02686 cinnamoyl-CoA reducta 91.1 1.7 3.6E-05 40.5 9.4 45 137-191 50-94 (367)
481 PRK14170 bifunctional 5,10-met 91.1 2.2 4.8E-05 37.9 9.6 96 120-251 137-232 (284)
482 cd01079 NAD_bind_m-THF_DH NAD 91.0 2 4.4E-05 35.9 8.7 113 120-250 33-158 (197)
483 PRK14968 putative methyltransf 91.0 0.62 1.3E-05 38.4 6.0 41 138-191 22-62 (188)
484 PLN00015 protochlorophyllide r 91.0 1 2.2E-05 40.7 7.8 72 156-227 3-84 (308)
485 PF01210 NAD_Gly3P_dh_N: NAD-d 91.0 0.92 2E-05 36.6 6.7 85 156-247 5-101 (157)
486 PLN02730 enoyl-[acyl-carrier-p 90.9 1.3 2.7E-05 40.1 8.2 38 139-187 8-47 (303)
487 PF01209 Ubie_methyltran: ubiE 90.9 0.65 1.4E-05 40.3 6.1 101 133-251 41-156 (233)
488 PRK01581 speE spermidine synth 90.8 3 6.6E-05 38.5 10.5 96 138-248 149-268 (374)
489 PRK06141 ornithine cyclodeamin 90.8 3.1 6.8E-05 37.8 10.7 102 138-259 123-230 (314)
490 PRK10258 biotin biosynthesis p 90.8 3.1 6.7E-05 36.3 10.4 95 136-249 39-141 (251)
491 PRK09310 aroDE bifunctional 3- 90.8 2.3 4.9E-05 41.1 10.2 70 139-229 331-401 (477)
492 PRK13403 ketol-acid reductoiso 90.7 3 6.4E-05 37.9 10.1 86 138-246 14-104 (335)
493 PRK13656 trans-2-enoyl-CoA red 90.7 1.9 4.2E-05 40.1 9.2 79 138-229 39-142 (398)
494 PRK06947 glucose-1-dehydrogena 90.7 1.5 3.2E-05 37.9 8.3 77 141-227 3-89 (248)
495 PLN02427 UDP-apiose/xylose syn 90.7 1.6 3.4E-05 40.8 9.0 76 139-227 13-95 (386)
496 PF04321 RmlD_sub_bind: RmlD s 90.6 0.37 8.1E-06 43.1 4.5 59 142-227 2-60 (286)
497 PRK14178 bifunctional 5,10-met 90.6 2.5 5.5E-05 37.5 9.5 96 120-251 132-227 (279)
498 KOG1207 Diacetyl reductase/L-x 90.6 1.2 2.6E-05 36.4 6.7 79 139-228 6-87 (245)
499 TIGR01777 yfcH conserved hypot 90.6 0.27 5.8E-06 43.7 3.6 64 156-228 4-67 (292)
500 PRK14172 bifunctional 5,10-met 90.6 3 6.6E-05 37.0 10.0 96 120-251 138-233 (278)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8e-56 Score=392.36 Aligned_cols=305 Identities=36% Similarity=0.538 Sum_probs=279.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++.++++| +++.+.+.|+|.++||+|+|.|+|+|++|+|.++|.++... +|++||||.+|+|+++|++|++|+
T Consensus 4 mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred eEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEEEecCCCccCC
Confidence 899999999988 99999999999999999999999999999999999998766 899999999999999999999999
Q ss_pred CCCEEEE----------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||||.. +..+|+|+||+++++.+++++|+++++++||.+.|++.|+|++|
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al- 159 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL- 159 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-
Confidence 9999953 22469999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
+..++.||++|+| .| .|++|++++|+|+++|++|+++++++++.+.++++|++++++.++.++.+.+++
T Consensus 160 k~~~~~pG~~V~I----------~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~ 228 (339)
T COG1064 160 KKANVKPGKWVAV----------VG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE 228 (339)
T ss_pred hhcCCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHh
Confidence 5599999999999 88 689999999999999999999999999999999999999999887777777665
Q ss_pred HhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC-CCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 291 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (335)
. +|+++|+++...+..+++.|+++|+++++|... .....++...+..+++++.|+...++.+. +
T Consensus 229 ~-----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~----------~ 293 (339)
T COG1064 229 I-----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL----------E 293 (339)
T ss_pred h-----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHH----------H
Confidence 3 999999999666899999999999999999985 45566888889999999999998875432 2
Q ss_pred HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.++++..+|+++|.+.+.++++++++|++.|++++..|++||++
T Consensus 294 e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 294 EALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred HHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence 28999999999999978999999999999999999999999875
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.3e-54 Score=391.70 Aligned_cols=321 Identities=43% Similarity=0.700 Sum_probs=291.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++...++|++++++|.|.|.|.+|||+|||.+++||+.|..++.|..+....+|++||.|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 89999999999988999999999999999999999999999999999998555556899999999999999999999999
Q ss_pred CCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157 (335)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g 157 (335)
+||+|+... .+|+|+||+.+|++.++++|+++++++||+++..++|||+++....++++|++||| +|
T Consensus 81 ~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV----------~g 150 (326)
T COG0604 81 VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLV----------HG 150 (326)
T ss_pred CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------ec
Confidence 999999996 67999999999999999999999999999999999999999999899999999999 99
Q ss_pred ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcc
Q 019790 158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237 (335)
Q Consensus 158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~ 237 (335)
|+|++|.+++|+||++|+++++++.++++.++++++|+++++++.+.+|.+.++++++++++|+|||++|++.+...+.+
T Consensus 151 aaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~ 230 (326)
T COG0604 151 AAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230 (326)
T ss_pred CCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHH
Confidence 99999999999999999887787778888889999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEEeccC-CCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790 238 LNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA 316 (335)
Q Consensus 238 l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 316 (335)
|+++|+++.+|... .....++...++.+.++..+.....+ +. +...+.++.+.+++.+|.+++.+..+|+|+|..
T Consensus 231 l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~-~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~ 306 (326)
T COG0604 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DP-EALAEALAELFDLLASGKLKPVIDRVYPLAEAP 306 (326)
T ss_pred hccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---ch-HHHHHHHHHHHHHHHcCCCcceeccEechhhhH
Confidence 99999999999887 44455667777788888888877655 11 455667777999999999999999999999966
Q ss_pred HHHHHHHh-CCCceeEEEeC
Q 019790 317 EAHQLMES-SQHIGKIMLVP 335 (335)
Q Consensus 317 ~a~~~~~~-~~~~gkvvi~~ 335 (335)
++..+... ++..||+|+++
T Consensus 307 ~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 307 AAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHHHHcccCCcceEEEeC
Confidence 66554433 48889999975
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.4e-50 Score=333.72 Aligned_cols=321 Identities=33% Similarity=0.528 Sum_probs=295.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
|.+++++.|..+++++++.|.|+|+++|++||..|+|+|.-|.....|-+. +...|++||-|.+|+|+++|.++++|++
T Consensus 10 k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 10 KCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred eEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCcccccc
Confidence 678899999999999999999999999999999999999999999999874 4557999999999999999999999999
Q ss_pred CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG 161 (335)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~ 161 (335)
||||.-+.+-|.|+++..+|...++++|+.+++.+||++...+.|||..+++..++++|++||+ +.++|+
T Consensus 89 GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlv----------haAAGG 158 (336)
T KOG1197|consen 89 GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLV----------HAAAGG 158 (336)
T ss_pred ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------Eecccc
Confidence 9999999888999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCC
Q 019790 162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 241 (335)
Q Consensus 162 ~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~ 241 (335)
+|++++|++++.|++++.++.+.++++.+++.|+.+.++++.+++.+++.+.++++|+|+++|.+|.+.+...+.+|++.
T Consensus 159 VGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~ 238 (336)
T KOG1197|consen 159 VGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPM 238 (336)
T ss_pred HHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 019790 242 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321 (335)
Q Consensus 242 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~ 321 (335)
|.++++|...+...+++...+..+.+++.-..+..+..-+ ..+.....+++.++-+|.+++.+.++|||+++.+|+.+
T Consensus 239 G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~--~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~d 316 (336)
T KOG1197|consen 239 GKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGE--VELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHAD 316 (336)
T ss_pred ceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCH--HHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHH
Confidence 9999999988876677777777778777655554442211 12333556688899999999999999999999999999
Q ss_pred HHhCCCceeEEEeC
Q 019790 322 MESSQHIGKIMLVP 335 (335)
Q Consensus 322 ~~~~~~~gkvvi~~ 335 (335)
+++..+.||+++.|
T Consensus 317 iesrktvGkvlLlp 330 (336)
T KOG1197|consen 317 IESRKTVGKVLLLP 330 (336)
T ss_pred HHhhhccceEEEeC
Confidence 99999999999865
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.5e-47 Score=324.99 Aligned_cols=306 Identities=26% Similarity=0.389 Sum_probs=268.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
++|++..++++..+++.+.+.|++.++||+|+++|+|||++|+|.+.|.++. ..+|.++|||.+|+|+++|++|++|++
T Consensus 11 ~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~ki 89 (360)
T KOG0023|consen 11 FGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKI 89 (360)
T ss_pred EEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccc
Confidence 5888999988777889999999999999999999999999999999999988 678999999999999999999999999
Q ss_pred CCEEEE-------------------ec----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790 82 GDQVCA-------------------LL----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (335)
Q Consensus 82 Gd~V~~-------------------~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~ 126 (335)
||+|-. +| ..|+|++|+++++..++++|++++.+.||.+.|+..|
T Consensus 90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGIT 169 (360)
T KOG0023|consen 90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGIT 169 (360)
T ss_pred cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceE
Confidence 999821 11 2367999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhHHHHHHcCCCEEEeCC-Cc
Q 019790 127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVCINYK-TE 204 (335)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~g~~~~~~~~-~~ 204 (335)
+|.+| ...++.||+++-| .| .|++|++++|+||++|.+|+++.++. ++.+.++.+|++..++.. +.
T Consensus 170 vYspL-k~~g~~pG~~vgI----------~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 170 VYSPL-KRSGLGPGKWVGI----------VG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred Eeehh-HHcCCCCCcEEEE----------ec-CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence 99999 6678889999999 88 56699999999999999999999987 566666789999988887 78
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHH
Q 019790 205 DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 284 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (335)
++.+.+.+.+++ .+|-+.+. ....+..++..|+++|+++++|.+.. ...++..++..+++++.|+....+...+
T Consensus 238 d~~~~~~~~~dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~ket~--- 311 (360)
T KOG0023|consen 238 DIMKAIMKTTDG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSRKETQ--- 311 (360)
T ss_pred HHHHHHHHhhcC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccHHHHH---
Confidence 888888877654 34444444 23457889999999999999998886 5788888999999999999998775332
Q ss_pred HHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 285 IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 285 ~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+++++..++.+++.+ +..+++++++|++.|++++..+|.|++
T Consensus 312 -------E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD 353 (360)
T KOG0023|consen 312 -------EALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVD 353 (360)
T ss_pred -------HHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEE
Confidence 288999999999888 789999999999999999999999885
No 5
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.1e-46 Score=346.46 Aligned_cols=312 Identities=26% Similarity=0.356 Sum_probs=271.8
Q ss_pred CEEEEEcCCCC------CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecC
Q 019790 1 MKAIVITQPGS------PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74 (335)
Q Consensus 1 mka~~~~~~~~------~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~ 74 (335)
|||+++..+|. ++.+++++.+.|.|+++||+|||.+++||++|++.+.|..+. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 99999998875 478999999999999999999999999999999999887543 3589999999999999999
Q ss_pred CCCCCCCCCEEEEecC------------------------------------------------CcceeeEEEecCCceE
Q 019790 75 NVSRWKVGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVL 106 (335)
Q Consensus 75 ~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~ 106 (335)
++++|++||+|+.... .|+|++|+.+++..++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999986310 2689999999999999
Q ss_pred eCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChh
Q 019790 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 185 (335)
Q Consensus 107 ~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~ 185 (335)
++|+++++++++.++++..|||+++.+..++++|++||| +| .|++|++++|+|+.+|+ +|++++++++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV----------~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~ 227 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAV----------VG-LGGVGLSALLGAVAAGASQVVAVDLNED 227 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCcEEEEcCCHH
Confidence 999999999999999999999999878889999999999 88 69999999999999999 6999999999
Q ss_pred hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHh
Q 019790 186 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLF 263 (335)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~ 263 (335)
+++.++++|++.++++.+.++.+.+++.+++ ++|++|||+|+ ..+..+++.++++|+++.+|.... ....++...++
T Consensus 228 r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 306 (371)
T cd08281 228 KLALARELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV 306 (371)
T ss_pred HHHHHHHcCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHh
Confidence 9999999999999998888888888888876 89999999987 457888999999999999997643 23456777788
Q ss_pred hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
.+++++.+++...... ++.++.+++++.+|++++ +++++|+|+|+++||+.+++++..+|+|+
T Consensus 307 ~~~~~i~g~~~~~~~~-------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 307 AEERTLKGSYMGSCVP-------RRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred hcCCEEEEEecCCCCh-------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 8999999987654321 112344789999999864 67899999999999999999988877653
No 6
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=7e-46 Score=338.90 Aligned_cols=318 Identities=27% Similarity=0.389 Sum_probs=272.1
Q ss_pred CEEEEEcCCCCC---cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790 1 MKAIVITQPGSP---EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (335)
Q Consensus 1 mka~~~~~~~~~---~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (335)
|||+++..+++| +.+++.+.|.|.|.++||+||+.++++|++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 999999998876 57899999999999999999999999999999999887654445689999999999999999998
Q ss_pred C-CCCCCEEEEecC-CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790 78 R-WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155 (335)
Q Consensus 78 ~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~ 155 (335)
+ |++||+|+++.. +|+|++|+.++.+.++++|++++++++++++..+.|||.++ ....+ +++.++|.
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~--------- 149 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVH--------- 149 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEE---------
Confidence 6 999999998754 39999999999999999999999999998888999998654 55555 45556550
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 235 (335)
++|+|++|++++|+|+.+|++|+++++++++.+.++++|++.++++...++.+.+++.+.++++|++|||+|+......+
T Consensus 150 ~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~ 229 (324)
T cd08291 150 TAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQIL 229 (324)
T ss_pred ccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHH
Confidence 47899999999999999999999999999999999999999999998888888899988888899999999998888889
Q ss_pred ccccCCCEEEEEeccCCCcc-ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790 236 GSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 314 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~ 314 (335)
.+++++|+++.+|....... .++...++.+++++.++....+..... .+.++.+.+++. +.+++.+.++|+|+|
T Consensus 230 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~i~~~~~l~~ 304 (324)
T cd08291 230 LAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLG----PEVVKKLKKLVK-TELKTTFASRYPLAL 304 (324)
T ss_pred HhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccC----HHHHHHHHHHHh-CccccceeeEEcHHH
Confidence 99999999999987654322 255666778899999887655432111 223455778887 889999999999999
Q ss_pred HHHHHHHHHhCCCceeEEEe
Q 019790 315 AAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 315 ~~~a~~~~~~~~~~gkvvi~ 334 (335)
+++|++.+.+++..||++++
T Consensus 305 ~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 305 TLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHhCCCCCeEEeC
Confidence 99999999999999999874
No 7
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-46 Score=322.75 Aligned_cols=308 Identities=23% Similarity=0.336 Sum_probs=264.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCC--CCCCCCCCceEEEEEEecCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVGKNVS 77 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~~~ 77 (335)
|+|+++..+++ +++++.|.|++ .|+||+|++.++|||++|.|.+........ +.|.++|||.+|+|.++|+.|+
T Consensus 5 ~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 5 NLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 78999998887 89999999988 999999999999999999999987654432 4599999999999999999999
Q ss_pred CCCCCCEEEE------------------------ec----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHH
Q 019790 78 RWKVGDQVCA------------------------LL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129 (335)
Q Consensus 78 ~~~~Gd~V~~------------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~ 129 (335)
++++||||.. ++ .+|++++|++.+++.|++||++++++++| +..+++.+||
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~H 160 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVH 160 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhh
Confidence 9999999952 11 35999999999999999999999999999 6667999999
Q ss_pred HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc---
Q 019790 130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED--- 205 (335)
Q Consensus 130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--- 205 (335)
|. +++++++|+++|| +| +|++|+.+...||++|+ +|++++..+.|++.++++|++.+.+....+
T Consensus 161 Ac-r~~~vk~Gs~vLV----------~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~ 228 (354)
T KOG0024|consen 161 AC-RRAGVKKGSKVLV----------LG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQ 228 (354)
T ss_pred hh-hhcCcccCCeEEE----------EC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHH
Confidence 99 7899999999999 98 79999999999999999 899999999999999999999887665533
Q ss_pred -HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 206 -FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 206 -~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
+.+.+++..+...+|+.|||+|... ++.++..++.+|.+++.|. .....+++......+++++.|++.+....
T Consensus 229 ~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~-g~~~~~fpi~~v~~kE~~~~g~fry~~~~---- 303 (354)
T KOG0024|consen 229 ELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGM-GAEEIQFPIIDVALKEVDLRGSFRYCNGD---- 303 (354)
T ss_pred HHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEecc-CCCccccChhhhhhheeeeeeeeeecccc----
Confidence 4455666667677999999999876 6788999999999777764 44557889999999999999998765422
Q ss_pred HHHHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 335 (335)
++.+++++++|++ ++++++.|+++++.+||+.+.+++. .-|+++.+
T Consensus 304 ------y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~ 352 (354)
T KOG0024|consen 304 ------YPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG 352 (354)
T ss_pred ------HHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence 2338999999994 5689999999999999999988774 23777753
No 8
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=9.4e-46 Score=321.41 Aligned_cols=309 Identities=26% Similarity=0.384 Sum_probs=273.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
+||.+..++++| |++++.+.++|++|||+||+.++|+|++|.+..+|..|.. +|.++|||.+|+|++||++|+.++
T Consensus 3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccccC
Confidence 578999999988 9999999999999999999999999999999999988765 899999999999999999999999
Q ss_pred CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (335)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (335)
+||+|+... .-++|++|.++++.+++++++..
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 999996321 01379999999999999999999
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
+++.++.+.|...|.+.+..+.+++++|+++.| .| .|++|++++|-|+..|+ ++++++.+++++++++
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV----------~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~ 227 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAV----------FG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK 227 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEE----------Ee-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence 999999999999999999989999999999999 87 89999999999999999 8999999999999999
Q ss_pred HcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceE
Q 019790 192 DLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT 268 (335)
Q Consensus 192 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~ 268 (335)
++|+.+++|.++. +..+.+.+.|++ +.|.+|||+|+. .+.+++.++.++|+.+.+|..... ..+++..++... .+
T Consensus 228 ~fGAT~~vn~~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~ 305 (366)
T COG1062 228 KFGATHFVNPKEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RV 305 (366)
T ss_pred hcCCceeecchhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ce
Confidence 9999999999887 588999999987 899999999985 578899999999999999987754 355677776655 88
Q ss_pred EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+.|+.+....... .+..+.+|..+|++. .++++.++|+|+++||++|.+++.+ |-||.
T Consensus 306 ~~Gs~~G~~~p~~-------diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 306 WKGSAFGGARPRS-------DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred EEEEeecCCcccc-------chhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 9999987653221 123388999999854 5889999999999999999999987 55554
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.4e-45 Score=335.10 Aligned_cols=306 Identities=27% Similarity=0.393 Sum_probs=262.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ .+++++.+.|.+.++||+||+.++++|++|++.+.+....+...|.++|||++|+|+++|+++++|+
T Consensus 1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFPGDR---TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEecCC---ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 9999998654 4999999999999999999999999999999988776433233578999999999999999999999
Q ss_pred CCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|+... .+|+|++|+.++.+.++++|+++++++++++++++.|||+++
T Consensus 78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l- 156 (339)
T cd08239 78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL- 156 (339)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-
Confidence 999998642 258999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (335)
...++.+|+++|| +| .|++|++++|+|+.+|++ |+++++++++.+.++++|++.++++++.+ .+.+.
T Consensus 157 ~~~~~~~g~~vlV----------~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~ 224 (339)
T cd08239 157 RRVGVSGRDTVLV----------VG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIR 224 (339)
T ss_pred HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHH
Confidence 5577899999999 97 599999999999999998 99999999999999999999999887766 67777
Q ss_pred HHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccC-hhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790 212 EETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELN-ITSLFAKRLTVQAAGLRSRSTENKALIVSEV 289 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (335)
+.+++.++|++|||+|+.. +..++++++++|+++.+|..... .++ ...++.+++++.+++..... .
T Consensus 225 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~----------~ 292 (339)
T cd08239 225 ELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFSVP----------D 292 (339)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCCHH----------H
Confidence 8887778999999999875 47789999999999999875432 233 34567789999988664321 2
Q ss_pred HHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 290 EKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 290 ~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++.+++++.+|.+++ +++++|+++|+++|++.+++++ .||+|+.+
T Consensus 293 ~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 293 MEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred HHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 344889999998764 6789999999999999998875 58999874
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=8.8e-45 Score=336.01 Aligned_cols=311 Identities=21% Similarity=0.321 Sum_probs=269.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+ +++++.+.|+|.++||+|||.++++|++|++.+.|..+. .+|.++|||++|+|+++|+++++|+
T Consensus 2 mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 2 VRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred cEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccC
Confidence 999999999876 899999999999999999999999999999999886532 3688999999999999999999999
Q ss_pred CCCEEEEec----------------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccC
Q 019790 81 VGDQVCALL----------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (335)
Q Consensus 81 ~Gd~V~~~~----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~ 120 (335)
+||+|+... .+|+|+||+.++.+.++++|+++++++++.+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 999997521 2488999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEE
Q 019790 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
++++.++|+++.+..++++|++||| +| .|++|++++|+|+.+|+ +|+++++++++++.++++|++.++
T Consensus 158 ~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i 226 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVKRGDSVAV----------IG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV 226 (358)
T ss_pred cccchhhHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence 9999999998878888999999999 97 69999999999999999 599999999999999999999999
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeecccc
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSR 277 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 277 (335)
++.+.++.+.+++.+++.++|++|||+|+ ..+..+++.++++|+++.+|..... ..++++..++.+++++.+++....
T Consensus 227 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 306 (358)
T TIGR03451 227 NSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDC 306 (358)
T ss_pred cCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCC
Confidence 98888888888888888889999999997 4578889999999999999976542 245667677888999998765322
Q ss_pred chhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 278 STENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.. +..++.+++++.+|++++ +++++|+++|+++|++.+++++.. |+++.
T Consensus 307 ~~-------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 307 LP-------ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred Cc-------HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 11 122445889999999865 578999999999999999888775 76653
No 11
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=6.8e-44 Score=325.48 Aligned_cols=323 Identities=23% Similarity=0.334 Sum_probs=280.6
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..+++| +.+++++.+.|.+.++||+|||.++++|++|++.+.|.++.....|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 899999887765 4689999999999999999999999999999999888765434458899999999999999999999
Q ss_pred CCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS 159 (335)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~ 159 (335)
++||+|+++...|+|++|+.++...++++|+++++++++.++..+.+||+++ ...++++|+++|| +|++
T Consensus 81 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI----------~g~~ 149 (324)
T cd08292 81 QVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQ----------NAAG 149 (324)
T ss_pred CCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEE----------cccc
Confidence 9999999987579999999999999999999999999999999999999988 5588999999999 9999
Q ss_pred chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790 160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239 (335)
Q Consensus 160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~ 239 (335)
|.+|++++++|+.+|++++++++++++.+.++++|.+.++++...++.+.+.+.+.++++|++|||+|+......+++++
T Consensus 150 g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~ 229 (324)
T cd08292 150 GAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLG 229 (324)
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhc
Confidence 99999999999999999999999999999998899999998888888888999999889999999999987888999999
Q ss_pred CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHH
Q 019790 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH 319 (335)
Q Consensus 240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~ 319 (335)
++|+++.+|........+++...+.+++++.++..........+......++.+++++.+|.+++.+.+.|+++++++|+
T Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~ 309 (324)
T cd08292 230 EGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAA 309 (324)
T ss_pred CCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHH
Confidence 99999999875433344565556778999998876543221112233456677899999999987677889999999999
Q ss_pred HHHHhCCCceeEEEe
Q 019790 320 QLMESSQHIGKIMLV 334 (335)
Q Consensus 320 ~~~~~~~~~gkvvi~ 334 (335)
+.+.++...+|++++
T Consensus 310 ~~~~~~~~~~kvvv~ 324 (324)
T cd08292 310 AASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHcCCCCceEEeC
Confidence 999988888898874
No 12
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.3e-44 Score=331.59 Aligned_cols=311 Identities=23% Similarity=0.313 Sum_probs=263.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++++ +++++.+.|.|.++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++|++++.|+
T Consensus 11 mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 88 (381)
T PLN02740 11 CKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK 88 (381)
T ss_pred eEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence 899999887754 788999999999999999999999999999999887654445789999999999999999999999
Q ss_pred CCCEEEEec---------------------------------------------------CCcceeeEEEecCCceEeCC
Q 019790 81 VGDQVCALL---------------------------------------------------GGGGYAEKVAVPAGQVLPVP 109 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------------------------------~~g~~~~~~~~~~~~~~~~p 109 (335)
+||+|++.. .+|+|+||+.++.+.++++|
T Consensus 89 vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP 168 (381)
T PLN02740 89 AGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKID 168 (381)
T ss_pred CCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECC
Confidence 999998632 14899999999999999999
Q ss_pred CCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHH
Q 019790 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA 188 (335)
Q Consensus 110 ~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~ 188 (335)
+++++++++.+++++.|||+++.+..++++|++||| +| .|++|++++|+|+.+|+ +|+++++++++++
T Consensus 169 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 169 PNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAI----------FG-LGAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred CCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 999999999999999999998878889999999999 98 69999999999999999 6999999999999
Q ss_pred HHHHcCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCCC-ccccChhHHh
Q 019790 189 VCKDLGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLF 263 (335)
Q Consensus 189 ~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~ 263 (335)
.++++|++.++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++.+++++ |+++.+|..... ...++...+
T Consensus 238 ~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~- 315 (381)
T PLN02740 238 KGKEMGITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL- 315 (381)
T ss_pred HHHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-
Confidence 9999999998887753 477778888776 89999999997 4578889999886 999999976542 123333333
Q ss_pred hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.+++++.|+....+... ..++.+++++.+|.+++ +++++|+|+|+++|++.+.+++. .|++|.
T Consensus 316 ~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 316 FDGRSITGSVFGDFKGK-------SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred hcCCeEEEEecCCCCcH-------HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 36888988876544321 12344889999998754 67899999999999999988776 498885
No 13
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=8.3e-44 Score=300.78 Aligned_cols=313 Identities=24% Similarity=0.342 Sum_probs=276.8
Q ss_pred EEEEEcCCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 2 ka~~~~~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|++++...|+| +++++++++.|....++|+||.+|+.|||+|+..+.|.+|.++.+|.+-|.|++|+|+.+|+++.+|+
T Consensus 21 kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk 100 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFK 100 (354)
T ss_pred ceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccC
Confidence 78999999998 89999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCC-cceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790 81 VGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS 159 (335)
Q Consensus 81 ~Gd~V~~~~~~-g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~ 159 (335)
+||.|+....+ |.|++|.+.+++.++++++.++++.||++..+.||||..|.+..++++||+|+. .|++
T Consensus 101 ~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQ----------Ngan 170 (354)
T KOG0025|consen 101 PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQ----------NGAN 170 (354)
T ss_pred CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeee----------cCcc
Confidence 99999987643 899999999999999999999999999999999999999999999999999999 9999
Q ss_pred chHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790 160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235 (335)
Q Consensus 160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 235 (335)
+.+|.+.+|+|+++|++-+.++|+....+++ +++|+++++......-.+..+.........+.|||+|+....+..
T Consensus 171 S~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~ia 250 (354)
T KOG0025|consen 171 SGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIA 250 (354)
T ss_pred cHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHH
Confidence 9999999999999999999999887666555 469999998543222122222223345789999999999988999
Q ss_pred ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH-HHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK-ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 314 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~ 314 (335)
+.|..+|..+.+|++.....+.+...+++|++++.|+++..+...+. ++...++...+.+|+..|++..+.....+|+|
T Consensus 251 r~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~ 330 (354)
T KOG0025|consen 251 RYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLAD 330 (354)
T ss_pred HHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechh
Confidence 99999999999999998888899999999999999999988755443 44456778889999999999999888999999
Q ss_pred HHHHHHHHHh
Q 019790 315 AAEAHQLMES 324 (335)
Q Consensus 315 ~~~a~~~~~~ 324 (335)
-..|++...+
T Consensus 331 ~~tald~~L~ 340 (354)
T KOG0025|consen 331 HKTALDAALS 340 (354)
T ss_pred hhHHHHHHHH
Confidence 9999996533
No 14
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.8e-43 Score=327.05 Aligned_cols=306 Identities=24% Similarity=0.323 Sum_probs=254.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++.+...+....+++.+.+.|.+.++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 89 (360)
T PLN02586 11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFK 89 (360)
T ss_pred hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccC
Confidence 56666665565566899999999999999999999999999999998876542 24689999999999999999999999
Q ss_pred CCCEEEEe-----c------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790 81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (335)
Q Consensus 81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 125 (335)
+||+|+.. | .+|+|+||++++.+.++++|+++++++++++++.+.
T Consensus 90 vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 169 (360)
T PLN02586 90 EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGI 169 (360)
T ss_pred CCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchH
Confidence 99999731 1 158999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHHHHcCCCEEEeCCCc
Q 019790 126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTE 204 (335)
Q Consensus 126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 204 (335)
|+|+++.....+++|++||| .| .|++|++++|+|+.+|++|++++.+++++ +.++++|++.++++.+.
T Consensus 170 ta~~al~~~~~~~~g~~VlV----------~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~ 238 (360)
T PLN02586 170 TVYSPMKYYGMTEPGKHLGV----------AG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP 238 (360)
T ss_pred HHHHHHHHhcccCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH
Confidence 99999876677789999999 87 69999999999999999998887776654 45578999988876543
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
+.+++.++ ++|++||++|+. .+..++++++++|+++.+|.... ...++...++.++..+.++.....
T Consensus 239 ---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~------ 306 (360)
T PLN02586 239 ---EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIGGI------ 306 (360)
T ss_pred ---HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcCCH------
Confidence 34555553 599999999974 57889999999999999986543 345677777778888887765432
Q ss_pred HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..++.+++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+.+
T Consensus 307 ----~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 307 ----KETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred ----HHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1234488999999998766 5899999999999999998889999875
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.3e-43 Score=326.48 Aligned_cols=308 Identities=22% Similarity=0.261 Sum_probs=260.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..+++ .+++++.+.|.++++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++|++++.|+
T Consensus 13 mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~ 86 (378)
T PLN02827 13 CRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFE 86 (378)
T ss_pred eEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccC
Confidence 89999886653 48999999999999999999999999999999887742 2478999999999999999999999
Q ss_pred CCCEEEEecC------------------------------------------------CcceeeEEEecCCceEeCCCCC
Q 019790 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (335)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (335)
+||+|+.... .|+|++|+.++++.++++|+++
T Consensus 87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 9999987521 2789999999999999999999
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
++++++.+.+++.++|+++....++++|++||| +| .|++|++++|+|+.+|+ .|+++++++++.+.++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV----------~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~ 235 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVI----------FG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 999999999999999988877788999999999 97 69999999999999999 4777888999999999
Q ss_pred HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCC-CEEEEEeccCCCccccCh-hHHhhcc
Q 019790 192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNI-TSLFAKR 266 (335)
Q Consensus 192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~ 266 (335)
++|++.++++.+ .++.+.+++.+++ ++|++|||+|.. .+..+++.++++ |+++.+|..... ..+.. ..++.++
T Consensus 236 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~ 313 (378)
T PLN02827 236 TFGVTDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSG 313 (378)
T ss_pred HcCCcEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcC
Confidence 999999988765 3567778888776 899999999985 578899999998 999999976543 23333 3567789
Q ss_pred eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+++.|+....+... ..++.+++++.+|++++ +++++|+|+|+++|++.+++++. .|+||.+
T Consensus 314 ~~i~g~~~~~~~~~-------~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 314 RTLKGSLFGGWKPK-------SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred ceEEeeecCCCchh-------hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 99998876543211 12334888999999887 78999999999999999998876 6888864
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.4e-43 Score=322.80 Aligned_cols=301 Identities=20% Similarity=0.271 Sum_probs=249.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhc-CCCCC-CCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
||++++..+++ +++++.+.| +.++||+|||.++|||++|++.+. |..+. ...+|.++|||++|+|+++ ++++
T Consensus 5 ~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 5 TQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 68889886655 899999987 689999999999999999999875 43321 2346899999999999999 7789
Q ss_pred CCCCCEEEEe--------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790 79 WKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (335)
Q Consensus 79 ~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~ 126 (335)
|++||+|+.. ..+|+|+||++++++.++++|+++++++++ +..++++
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~ 157 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAV 157 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHH
Confidence 9999999742 125999999999999999999999988765 6678889
Q ss_pred HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790 127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED 205 (335)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 205 (335)
||+++.+ ....++++|+| +| +|++|++++|+|+.+|+ +|+++++++++++.++++|++.++|+++.+
T Consensus 158 a~~al~~-~~~~~g~~VlV----------~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~ 225 (343)
T PRK09880 158 AIHAAHQ-AGDLQGKRVFV----------SG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD 225 (343)
T ss_pred HHHHHHh-cCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc
Confidence 9999954 45568999999 87 59999999999999999 689999999999999999999999887766
Q ss_pred HHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHH
Q 019790 206 FVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 284 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (335)
+.+ +.+. . .++|++|||+|+. .+..+++.++++|+++.+|.... ..++++..++.+++++.++....
T Consensus 226 ~~~-~~~~-~-g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~-------- 293 (343)
T PRK09880 226 LDH-YKAE-K-GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFRFT-------- 293 (343)
T ss_pred HHH-Hhcc-C-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEeecc--------
Confidence 543 2222 2 2699999999984 57889999999999999996543 34677777888999999876431
Q ss_pred HHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 285 IVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 285 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..++.+++++.+|++++ +++++|+++|+++|++.+.+++..||+++.|
T Consensus 294 ---~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 294 ---EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ---ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 12344899999999875 6789999999999999999888789999976
No 17
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=8.2e-43 Score=323.80 Aligned_cols=311 Identities=23% Similarity=0.341 Sum_probs=258.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.. +++++.|.|+|.++||+|||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccCC
Confidence 899998877654 899999999999999999999999999999999887643 34689999999999999999999999
Q ss_pred CCCEEEEecC------------------------------------------------CcceeeEEEecCCceEeCCCCC
Q 019790 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (335)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (335)
+||+|+.... .|+|+||+.++.+.++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999976420 2689999999999999999999
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
++++++.+++++.|||+++.+..++++|++||| +| .|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV----------~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~ 227 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAV----------FG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAK 227 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 999999999999999999878889999999999 97 69999999999999999 7999999999999999
Q ss_pred HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790 192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR 266 (335)
Q Consensus 192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~ 266 (335)
++|++.++++.+ .++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... ....++...++. +
T Consensus 228 ~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~ 305 (368)
T TIGR02818 228 KLGATDCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-G 305 (368)
T ss_pred HhCCCeEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-c
Confidence 999999988764 3466777787776 89999999997 4578889999886 99999997642 222333444332 3
Q ss_pred eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..+.++....... ...++.+++++.+|.++ +++++.|+|+|+++|++.+++++. .|+++.+
T Consensus 306 ~~~~g~~~~~~~~-------~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 306 RVWRGSAFGGVKG-------RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred ceEEEeeccCCCc-------HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 4566665432211 11234488999999875 567999999999999999988765 6998864
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.8e-42 Score=321.85 Aligned_cols=309 Identities=21% Similarity=0.281 Sum_probs=261.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+ +++++.+.|+|.++||+|||.+++||++|++.+.|..+ ...+|.++|||++|+|+++|+++++|+
T Consensus 3 ~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 3 CKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred cEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEEEeCCCCCccc
Confidence 799999877655 89999999999999999999999999999999988764 235689999999999999999999999
Q ss_pred CCCEEEEec-------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (335)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (335)
+||+|+.+. ..|+|+||+.++...++++|++
T Consensus 80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 999998641 1278999999999999999999
Q ss_pred CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC 190 (335)
Q Consensus 112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~ 190 (335)
+++++++.+++.+.++|+++....++++|++||| +| +|++|++++|+|+.+|+ +|+++++++++.+.+
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~ 228 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAI----------FG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA 228 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 9999999999999999999878889999999999 97 69999999999999999 899999999999999
Q ss_pred HHcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCC-CEEEEEeccCCC-ccccChhHHhhc
Q 019790 191 KDLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAK 265 (335)
Q Consensus 191 ~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 265 (335)
+++|++.++++.. ..+.+.+++.+++ ++|++|||+|+. .+..++.+++++ |+++.+|..... ..+++...++ +
T Consensus 229 ~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~ 306 (369)
T cd08301 229 KKFGVTEFVNPKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-N 306 (369)
T ss_pred HHcCCceEEcccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-c
Confidence 9999998888765 3466777777766 899999999875 467889999996 999999986542 2344444444 6
Q ss_pred ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
++++.++....+... ..++.+++++.+|.++. +++++|+|+|+++|++.+.+++.. |+++
T Consensus 307 ~~~i~g~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 307 GRTLKGTLFGGYKPK-------TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCeEEEEecCCCChH-------HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 899999876544211 12344888888888654 578999999999999999998864 8876
No 19
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.1e-42 Score=321.20 Aligned_cols=310 Identities=26% Similarity=0.352 Sum_probs=258.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+ +++++.+.|.|.++||+|||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 3 CKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred ceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEEEeCCCCccCC
Confidence 799998877654 899999999999999999999999999999999887643 24689999999999999999999999
Q ss_pred CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (335)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (335)
+||+|++.. ..|+|+||+.++.+.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 999998641 12589999999999999999999
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
++++++.+++++.+||+++.+..++++|++||| +| .|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV----------~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~ 228 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAV----------FG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAK 228 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 999999999999999999878889999999999 97 69999999999999999 7999999999999999
Q ss_pred HcCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790 192 DLGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR 266 (335)
Q Consensus 192 ~~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~ 266 (335)
++|++.++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... .....+...+. +.
T Consensus 229 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~ 306 (368)
T cd08300 229 KFGATDCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TG 306 (368)
T ss_pred HcCCCEEEcccccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hc
Confidence 9999999987764 477788888876 89999999997 4678889999886 99999997642 22233333333 33
Q ss_pred eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.++.++....+.. .+.++.+++++.+|++++ +++++|+|+|+++||+.+.+++. .|++++
T Consensus 307 ~~~~g~~~~~~~~-------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 307 RVWKGTAFGGWKS-------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CeEEEEEecccCc-------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 4566655443321 112344889999999875 57899999999999999988775 588874
No 20
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.2e-42 Score=322.60 Aligned_cols=305 Identities=24% Similarity=0.325 Sum_probs=254.5
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+.+...+.+..++..+.+.|.|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus 6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCC
Confidence 5666665565566888899999999999999999999999999999886532 235889999999999999999999999
Q ss_pred CCEEEEe-----c------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790 82 GDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (335)
Q Consensus 82 Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~ 126 (335)
||+|... | .+|+|+||+.++++.++++|+++++++++++++...|
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 9999731 1 1589999999999999999999999999999999999
Q ss_pred HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HHHHHHcCCCEEEeCCCc
Q 019790 127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTE 204 (335)
Q Consensus 127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~ 204 (335)
+|+++..... .++|++++| .| .|++|++++|+|+.+|++|++++.++++ .+.++++|++.++++.+.
T Consensus 165 a~~al~~~~~~~~~g~~VlV----------~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~ 233 (375)
T PLN02178 165 VYSPMKYYGMTKESGKRLGV----------NG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS 233 (375)
T ss_pred HHHHHHHhCCCCCCCCEEEE----------Ec-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH
Confidence 9999855443 368999999 87 6999999999999999999998876554 677788999998876542
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
+.+.+.++ ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+++++.|+......
T Consensus 234 ---~~v~~~~~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~----- 302 (375)
T PLN02178 234 ---QKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIGGMK----- 302 (375)
T ss_pred ---HHHHHhhC--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCccCHH-----
Confidence 35555553 699999999986 57889999999999999987643 3456777788899999988664321
Q ss_pred HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.++.+++++.+|++++.+ +.|+|+|+++|++.+.+++..||+|+.+
T Consensus 303 -----~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 303 -----ETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred -----HHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 133488999999998876 6799999999999999998889999864
No 21
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.5e-42 Score=317.25 Aligned_cols=298 Identities=22% Similarity=0.284 Sum_probs=251.3
Q ss_pred EEEEcCCCCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 3 AIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 3 a~~~~~~~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|+.+..+|.+ ..+++++.|.|+|.++||+|||.++|+|++|++.+.|..+.. ..|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFA 79 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccC
Confidence 3566677765 569999999999999999999999999999999998876432 3478999999999999999999999
Q ss_pred CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|+.. ..+|+|++|+.++.+.++++|+++++++++.+++++.|||+++.
T Consensus 80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~ 159 (329)
T TIGR02822 80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL 159 (329)
T ss_pred CCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH
Confidence 99999731 12589999999999999999999999999999999999999994
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
..++++|+++|| +|+ |++|++++|+|+.+|++|+++++++++++.++++|++++++..+..
T Consensus 160 -~~~~~~g~~VlV----------~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~------- 220 (329)
T TIGR02822 160 -RASLPPGGRLGL----------YGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP------- 220 (329)
T ss_pred -hcCCCCCCEEEE----------EcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC-------
Confidence 578999999999 985 9999999999999999999999999999999999999988753211
Q ss_pred HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 291 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (335)
..++|+++++.+. ..+..++++++++|+++.+|........++...++.+++++.++..... ..+.
T Consensus 221 ---~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~ 287 (329)
T TIGR02822 221 ---PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTR----------ADAR 287 (329)
T ss_pred ---cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCH----------HHHH
Confidence 1368998987765 4578899999999999999975443335666677788889888754321 1133
Q ss_pred HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.+++++.+|++++ ++++|+|+|+++|++.+.+++..||+|+.
T Consensus 288 ~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 288 EFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred HHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 4788999999874 57899999999999999999999999873
No 22
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-42 Score=297.15 Aligned_cols=310 Identities=25% Similarity=0.340 Sum_probs=268.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
+||.+..+++.| |.++|.+.++|+.+||+||+.++++|++|...+.|.. ....+|.++|||.+|+|+.+|.+|++|+
T Consensus 8 CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~-~~~~fP~IlGHEaaGIVESvGegV~~vk 84 (375)
T KOG0022|consen 8 CKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD-PEGLFPVILGHEAAGIVESVGEGVTTVK 84 (375)
T ss_pred EeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC-ccccCceEecccceeEEEEecCCccccC
Confidence 589999999988 9999999999999999999999999999999999987 3456799999999999999999999999
Q ss_pred CCCEEEEec-------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (335)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (335)
+||+|+++. .-.+|+||.+++...++++++.
T Consensus 85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~ 164 (375)
T KOG0022|consen 85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS 164 (375)
T ss_pred CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence 999997532 0137999999999999999999
Q ss_pred CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC 190 (335)
Q Consensus 112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~ 190 (335)
.+++.++.+.+...|.|.|..+.+++++|+++.| +| .|++|+++++-||+.|+ +++.++-++++.+.+
T Consensus 165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAV----------fG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a 233 (375)
T KOG0022|consen 165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAV----------FG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKA 233 (375)
T ss_pred CChhheeEeeccccccchhhhhhcccCCCCEEEE----------Ee-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHH
Confidence 9999999999999999999999999999999999 88 89999999999999999 999999999999999
Q ss_pred HHcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCC-CEEEEEeccCCC-ccccChhHHhhc
Q 019790 191 KDLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAK 265 (335)
Q Consensus 191 ~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 265 (335)
+++|+...+|..+ ....+.+.+.|++ ++|+-|+|+|+.. +.+++.+...+ |+-+.+|..... ..++.+.+++ +
T Consensus 234 k~fGaTe~iNp~d~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~ 311 (375)
T KOG0022|consen 234 KEFGATEFINPKDLKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-T 311 (375)
T ss_pred HhcCcceecChhhccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-c
Confidence 9999999998874 3478889999985 8999999999954 67888888877 999999987754 3455666555 5
Q ss_pred ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+-++.|+.+..+.....- ..+.+...+++ +..++++.+||+++++||++|.+++.+ |.|+.
T Consensus 312 GR~~~Gs~FGG~K~~~~i-------P~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 312 GRTWKGSAFGGFKSKSDI-------PKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred ccEEEEEecccccchhhh-------hHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 778888888876543322 22444444555 567899999999999999999999887 76664
No 23
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-41 Score=313.06 Aligned_cols=314 Identities=20% Similarity=0.239 Sum_probs=257.6
Q ss_pred EEEEEcC-C---CCCcceEEEee---cCC-CCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCC--ceEEEEEE
Q 019790 2 KAIVITQ-P---GSPEVLQLQEV---EDP-QIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL--ECSGTILS 71 (335)
Q Consensus 2 ka~~~~~-~---~~~~~l~~~~~---~~~-~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~~ 71 (335)
|+|++.+ + ..+++|++++. +.| ++.+|||+|||.++++|+.|+..+.+... ....|+++|+ |++|+|..
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~~ 88 (348)
T PLN03154 10 KQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSKV 88 (348)
T ss_pred eEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEEE
Confidence 5666632 2 12477898885 454 45799999999999999999875433222 1234789998 88999999
Q ss_pred ecCCCCCCCCCCEEEEecCCcceeeEEEecCCc--eE--eCCCCCChh-hhccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019790 72 VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VL--PVPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146 (335)
Q Consensus 72 vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~--~~p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~ 146 (335)
+|++++.|++||+|+++ |+|++|..++.+. ++ ++|++++++ ++++++++++|||+++....++++|++|||
T Consensus 89 vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV- 164 (348)
T PLN03154 89 VDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV- 164 (348)
T ss_pred EecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE-
Confidence 99999999999999987 7899999998753 54 458999986 688899999999999988889999999999
Q ss_pred eccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEe
Q 019790 147 FCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILD 224 (335)
Q Consensus 147 ~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid 224 (335)
+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++.+ .++.+.+++.++ .++|++||
T Consensus 165 ---------~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d 234 (348)
T PLN03154 165 ---------SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFD 234 (348)
T ss_pred ---------ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEE
Confidence 998899999999999999999999999999999987 799999999875 367777777765 58999999
Q ss_pred CCChhhHHHhhccccCCCEEEEEeccCCCcc-----ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHC
Q 019790 225 CMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299 (335)
Q Consensus 225 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (335)
|+|+..+..++++++++|+++.+|...+... ..+...++.+++++.|+....+.. ...+.++.+++++.+
T Consensus 235 ~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~-----~~~~~~~~~~~l~~~ 309 (348)
T PLN03154 235 NVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH-----LFPQFLENVSRYYKQ 309 (348)
T ss_pred CCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHH-----HHHHHHHHHHHHHHC
Confidence 9999888899999999999999987653321 124556778899999886543211 122345669999999
Q ss_pred CccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 300 g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
|++++.+..+|+|+++++|++.+++++..||+|+++
T Consensus 310 G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 310 GKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred CCccCceecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence 999988888999999999999999999999999874
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1e-41 Score=316.26 Aligned_cols=309 Identities=25% Similarity=0.335 Sum_probs=259.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++...+.+ +++++.|.|.+.++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|+
T Consensus 3 ~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 3 CKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred cEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCC
Confidence 689988876654 89999999999999999999999999999999988654 34688999999999999999999999
Q ss_pred CCCEEEEec-----------------------------------------------CCcceeeEEEecCCceEeCCCCCC
Q 019790 81 VGDQVCALL-----------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS 113 (335)
Q Consensus 81 ~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 113 (335)
+||+|++.. ..|+|++|+.++.+.++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999998741 137899999999999999999999
Q ss_pred hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH
Q 019790 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD 192 (335)
Q Consensus 114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~ 192 (335)
+++++.+++++.|||+++.+..++++|+++|| +| .|++|++++++|+++|+ +|+++++++++++.+++
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV----------~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~ 227 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAV----------FG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE 227 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999878889999999999 96 69999999999999999 79999999999999999
Q ss_pred cCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCCCccccChhHHhhcceE
Q 019790 193 LGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLT 268 (335)
Q Consensus 193 ~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 268 (335)
+|++.+++.... .+.+.+++.++ .++|++|||+|+ ..+..++++++++ |+++.+|...+...++++..+.. +++
T Consensus 228 ~ga~~~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~ 305 (365)
T cd08277 228 FGATDFINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRT 305 (365)
T ss_pred cCCCcEeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCE
Confidence 999988887653 35667777777 589999999996 4567889999885 99999997653333455555553 788
Q ss_pred EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+.++....+... ..++.+++++.++.++ +++++.|+++|+++|++.+.+++. .|+++.
T Consensus 306 i~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 306 WKGSFFGGFKSR-------SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred EEeeecCCCChH-------HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 888776544211 1233488888888644 578899999999999999988774 588763
No 25
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=6e-42 Score=319.54 Aligned_cols=307 Identities=21% Similarity=0.331 Sum_probs=244.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-------CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEec
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIK-------DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG 73 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~-------~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 73 (335)
|||+++..+++ +++++.|.|.|+ +|||+|||.++|||++|++.+.|..+. .+|.++|||++|+|+++|
T Consensus 3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEc
Confidence 99999987764 899999999874 689999999999999999999886532 358999999999999999
Q ss_pred CCCCCCCCCCEEEEec-------------------------------------CCcceeeEEEecCC--ceEeCCCCCCh
Q 019790 74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL 114 (335)
Q Consensus 74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (335)
+++++|++||||.... .+|+|+||+.++.. .++++|++++.
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~ 157 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence 9999999999996520 14899999999964 69999998653
Q ss_pred ----hhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEE-EEecChhhHHH
Q 019790 115 ----KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF-VTAGSEEKLAV 189 (335)
Q Consensus 115 ----~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~-~~~~~~~~~~~ 189 (335)
.+++++.+++.++|+++ ...+++++++||| .| +|++|++++|+|+.+|++++ ++++++++++.
T Consensus 158 ~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV----------~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~ 225 (393)
T TIGR02819 158 LEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYI----------AG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ 225 (393)
T ss_pred cccccceeeeccHHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence 35677888999999998 4578999999999 76 69999999999999999754 45667889999
Q ss_pred HHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh---------------hHHHhhccccCCCEEEEEeccCC-C
Q 019790 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQGG-A 253 (335)
Q Consensus 190 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~ 253 (335)
++++|++.+.+....++.+.+.+.+++.++|++|||+|.. .+.++++.++++|+++.+|.... .
T Consensus 226 a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~ 305 (393)
T TIGR02819 226 ARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTED 305 (393)
T ss_pred HHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcc
Confidence 9999997533333456777788888878899999999974 58889999999999999998632 1
Q ss_pred c-----------cccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccc-cccchhhHHHHH
Q 019790 254 K-----------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIY-KYLPLCEAAEAH 319 (335)
Q Consensus 254 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~l~~~~~a~ 319 (335)
. .++....++.+++++.+..... . .....+++++.+|++++ +++ ++|+|+|+++||
T Consensus 306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~--~--------~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~ 375 (393)
T TIGR02819 306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV--M--------KYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY 375 (393)
T ss_pred cccccccccccccccchHHhhccCceEEeccCCh--h--------hhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence 1 1223344455666666532110 0 11123889999999764 455 789999999999
Q ss_pred HHHHhCCCceeEEEeC
Q 019790 320 QLMESSQHIGKIMLVP 335 (335)
Q Consensus 320 ~~~~~~~~~gkvvi~~ 335 (335)
+.+.+++. +|++++|
T Consensus 376 ~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 376 AEFDAGAA-KKFVIDP 390 (393)
T ss_pred HHHhhCCc-eEEEEeC
Confidence 99988754 7999875
No 26
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-41 Score=314.19 Aligned_cols=310 Identities=23% Similarity=0.283 Sum_probs=254.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..++. +++++.+.|+| .++||+|||.++++|++|++.+.+... ..+|.++|||++|+|+++|+++++|
T Consensus 1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~ 75 (347)
T PRK10309 1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDL 75 (347)
T ss_pred CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCC
Confidence 99999997664 89999999987 589999999999999999975432111 1247899999999999999999999
Q ss_pred CCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
++||+|+++. .+|+|++|+.++.+.++++|+++++++++.+. +.+++++++
T Consensus 76 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~- 153 (347)
T PRK10309 76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF- 153 (347)
T ss_pred CCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-
Confidence 9999998752 25899999999999999999999999998664 566688876
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (335)
....+++++++|| +| +|++|++++|+|+.+|++ |+++++++++++.++++|++.+++++... .+.+.
T Consensus 154 ~~~~~~~g~~vlV----------~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~ 221 (347)
T PRK10309 154 HLAQGCEGKNVII----------IG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQ 221 (347)
T ss_pred HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHH
Confidence 6678899999999 96 699999999999999996 78888899999999999999998877655 55677
Q ss_pred HHhCCCccc-EEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccC---hhHHhhcceEEEEeeccccchhhHHHHH
Q 019790 212 EETGGKGVD-VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIV 286 (335)
Q Consensus 212 ~~~~~~~~d-~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
+.+.+.++| ++|||+|+. .+..+++.++++|+++.+|..... .+++ ...++.+++++.+++........
T Consensus 222 ~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----- 295 (347)
T PRK10309 222 SVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LHLTSATFGKILRKELTVIGSWMNYSSPWP----- 295 (347)
T ss_pred HHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cccChhhhhHHhhcCcEEEEEeccccCCcc-----
Confidence 777777898 999999975 578899999999999999976543 2232 23567789999997664221110
Q ss_pred HHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 287 SEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 287 ~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.+.++.+++++.+|.++ +++++.|+|+|+++|++.+.+++..||+|+++
T Consensus 296 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 296 GQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred hhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 11234488899999874 67899999999999999999988889999875
No 27
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.7e-41 Score=313.27 Aligned_cols=307 Identities=31% Similarity=0.448 Sum_probs=262.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC-CC---------CCCCCCCCCCceEEEEE
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PP---------PKGASPYPGLECSGTIL 70 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~-~~---------~~~~p~~~G~e~~G~V~ 70 (335)
|||+++..++. +++++.+.|++.++||+||+.++++|++|++.+.+.. .. ...+|.++|||++|+|+
T Consensus 1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 99999987653 8999999999999999999999999999998765421 11 11258899999999999
Q ss_pred EecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcc
Q 019790 71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (335)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~ 122 (335)
++|++++.|++||+|++.. ..|+|++|+.++...++++|+++++++++.+ .
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~ 156 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E 156 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence 9999999999999998621 1589999999999999999999999998765 6
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 019790 123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201 (335)
Q Consensus 123 ~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~ 201 (335)
+..+||+++ ...+++++++++| +| .|.+|.+++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus 157 ~~~ta~~~l-~~~~~~~g~~vlI----------~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 224 (351)
T cd08233 157 PLAVAWHAV-RRSGFKPGDTALV----------LG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP 224 (351)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence 788999999 7788999999999 97 59999999999999999 89999999999999999999999999
Q ss_pred CCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh
Q 019790 202 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 280 (335)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (335)
++.++.+.+++.++++++|++|||+|+ ..+..++++++++|+++.+|... ...+++...+..+++++.+......
T Consensus 225 ~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~--- 300 (351)
T cd08233 225 TEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYTR--- 300 (351)
T ss_pred CccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccCc---
Confidence 888888889888888789999999985 56788999999999999999765 3356777778889999998765421
Q ss_pred hHHHHHHHHHHHHHHHHHCCccc--cccccccchhhH-HHHHHHHHhCCCc-eeEEEe
Q 019790 281 NKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEA-AEAHQLMESSQHI-GKIMLV 334 (335)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvi~ 334 (335)
..++++++++.+|.++ +.+.++|+++|+ ++|++.+.+++.. +|+||.
T Consensus 301 -------~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 301 -------EDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred -------chHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 1234489999999985 457889999996 7999999998874 899873
No 28
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-41 Score=315.11 Aligned_cols=304 Identities=21% Similarity=0.281 Sum_probs=256.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|+|+++..++++ +++++.+.|++.++||+|||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus 10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCccccc
Confidence 578888888865 899999999999999999999999999999998886533 23588999999999999999999999
Q ss_pred CCCEEEEe-----c------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790 81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (335)
Q Consensus 81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 125 (335)
+||+|+.. | .+|+|++|+.++.+.++++|++++++++++++++++
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999731 1 248999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCEEEeCCCc
Q 019790 126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTE 204 (335)
Q Consensus 126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 204 (335)
|||+++......++|++++| +| .|++|++++|+|+.+|++|++++++++++..+ +++|++.++++.+.
T Consensus 167 ta~~al~~~~~~~~g~~vlV----------~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~ 235 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGI----------LG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA 235 (357)
T ss_pred HHHHHHHHcccCCCCCeEEE----------Ec-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence 99999976666789999999 95 79999999999999999999998887776555 56999887765442
Q ss_pred cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 205 DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
..+.+.+. ++|++|||+|. ..+..++++++++|+++.+|.... ..+++...++.+++++.+++.....
T Consensus 236 ---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~----- 304 (357)
T PLN02514 236 ---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSMK----- 304 (357)
T ss_pred ---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCHH-----
Confidence 33445443 69999999996 457889999999999999997643 2456677788899999998765421
Q ss_pred HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.++.+++++.+|++.+.+ ++|+|+|+++|++.+.+++..||+|+.+
T Consensus 305 -----~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 305 -----ETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred -----HHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 133488999999998776 5899999999999999999889999875
No 29
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.6e-41 Score=311.95 Aligned_cols=314 Identities=25% Similarity=0.269 Sum_probs=258.3
Q ss_pred EEEEEcCCCCCcceEEEeecC----CCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCce--EEEEEEecCC
Q 019790 2 KAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC--SGTILSVGKN 75 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~----~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~ 75 (335)
|++....+. ++.|++++.+. |+|++|||||||.+++||+.|++...|........|+++|++. .|.+..+|++
T Consensus 9 ~~~~~~~~~-~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 9 KAYVTGFPK-ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred ecCCCCCCC-ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 455533333 57799999987 8899999999999999999999998885432224578899755 4555567888
Q ss_pred CCCCCCCCEEEEecCCcceeeEEEecC-CceEeCC-CCCChh-hhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccc
Q 019790 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVP-SGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152 (335)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~ 152 (335)
++.|++||+|+++ |+|+||++++. ..++++| ++++++ ++++++++++|||+++.+..++++|++|||
T Consensus 88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI------- 157 (338)
T cd08295 88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFV------- 157 (338)
T ss_pred CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEE-------
Confidence 8899999999987 78999999999 7999995 568876 788999999999999988889999999999
Q ss_pred cccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 153 ~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
+|++|++|++++|+|+.+|++|+++++++++.+.+++ +|++.++++.+ .++.+.+++.++ .++|++||++|+..
T Consensus 158 ---~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~ 233 (338)
T cd08295 158 ---SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKM 233 (338)
T ss_pred ---ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHH
Confidence 9999999999999999999999999999999999998 99999998764 477777777775 68999999999988
Q ss_pred HHHhhccccCCCEEEEEeccCCCcc-----ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc
Q 019790 231 FQRNLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 305 (335)
Q Consensus 231 ~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 305 (335)
+..++++++++|+++.+|....... ..+...+..+++++.++....... ...+.++.+++++.+|.+++.
T Consensus 234 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~l~~~g~l~~~ 308 (338)
T cd08295 234 LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLH-----RYPEFLEEMSGYIKEGKLKYV 308 (338)
T ss_pred HHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHH-----HHHHHHHHHHHHHHCCCeEce
Confidence 8999999999999999986543211 123455667788888765543211 123455668899999999987
Q ss_pred cccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 306 IYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 306 ~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+...|+++++++|++.+++++..||+|++.
T Consensus 309 ~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 309 EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 777799999999999999999899999864
No 30
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.7e-41 Score=310.64 Aligned_cols=324 Identities=28% Similarity=0.356 Sum_probs=275.8
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCC-CcEEEEEEEeecCcchhhhhcCCCCCCCC----CCCCCCCceEEEEEEecC
Q 019790 1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKG----ASPYPGLECSGTILSVGK 74 (335)
Q Consensus 1 mka~~~~~~~~~-~~l~~~~~~~~~~~~-~eVlI~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~ 74 (335)
|||+++..++.+ +.+.+++.|.|++.+ ++|+||+.++++|++|+..+.|..+.... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 999999988865 468999999998888 99999999999999999998887653322 577999999999999999
Q ss_pred CCCCCCCCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccc
Q 019790 75 NVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153 (335)
Q Consensus 75 ~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~ 153 (335)
+++.|++||+|++.. ..|+|++|+.++.+.++++|++++++++++++++.+|||+++.....++++++|||
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI-------- 152 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQ-------- 152 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEE--------
Confidence 999999999999886 36899999999999999999999999999999999999999987788999999999
Q ss_pred ccccccchHHHHHHHHHhhCCCeEEEEecCh----hhHHHHHHcCCCEEEeCCCc---cHHHHHHHHhCCCcccEEEeCC
Q 019790 154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGVDVILDCM 226 (335)
Q Consensus 154 ~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~ 226 (335)
+|++|++|++++++|+++|++++++++++ ++.+.++++|++.++++... .+...+...+++ ++|++|||+
T Consensus 153 --~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~ 229 (341)
T cd08290 153 --NGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCV 229 (341)
T ss_pred --ccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECc
Confidence 99899999999999999999999998776 66788888999999887765 677778877776 899999999
Q ss_pred ChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccccc
Q 019790 227 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI 306 (335)
Q Consensus 227 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 306 (335)
|+..+...+++++++|+++.+|........++...++.+++++.+...........+......++.+++++.+|.+.+..
T Consensus 230 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (341)
T cd08290 230 GGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPP 309 (341)
T ss_pred CcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCc
Confidence 99888888999999999999986544334456656678899999887654321011123344566688999999988876
Q ss_pred cccc---chhhHHHHHHHHHhCCCceeEEEeC
Q 019790 307 YKYL---PLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 307 ~~~~---~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
...+ +++++++|++.+.+++..||+|+.|
T Consensus 310 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 310 VEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 6677 9999999999999999899999875
No 31
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.8e-41 Score=306.01 Aligned_cols=324 Identities=43% Similarity=0.735 Sum_probs=280.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+..+++++.+.|++.++||+|||.++++|+.|+....|..+.....|.++|+|++|+|+++|++++.++
T Consensus 2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 81 (334)
T PTZ00354 2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK 81 (334)
T ss_pred cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 89999999888777888888888899999999999999999999998887655445577999999999999999999999
Q ss_pred CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS 160 (335)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g 160 (335)
+||+|+++..+|+|++|++++.+.++++|++++..+++.++.++.+||+++.....+.++++++| +|++|
T Consensus 82 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI----------~ga~g 151 (334)
T PTZ00354 82 EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLI----------HAGAS 151 (334)
T ss_pred CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------EcCCc
Confidence 99999998667999999999999999999999999999999999999999988889999999999 99899
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~ 239 (335)
.+|++++++|+.+|++++++++++++.+.++++|.+.+++....+ +...+.+.++++++|++|||+++..+..++++++
T Consensus 152 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~ 231 (334)
T PTZ00354 152 GVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLA 231 (334)
T ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhc
Confidence 999999999999999988899999999999999998888876655 7778888888788999999999888888999999
Q ss_pred CCCEEEEEeccCCCccc-cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHH
Q 019790 240 IDGRLFIIGTQGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA 318 (335)
Q Consensus 240 ~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a 318 (335)
++|+++.+|...+.... ++...++.++.++.++.................++.+++++.++.+.+.+.+.+++++++++
T Consensus 232 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (334)
T PTZ00354 232 VDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEA 311 (334)
T ss_pred cCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHH
Confidence 99999999865443322 66666667777888876654332222234445666688899999988878889999999999
Q ss_pred HHHHHhCCCceeEEEe
Q 019790 319 HQLMESSQHIGKIMLV 334 (335)
Q Consensus 319 ~~~~~~~~~~gkvvi~ 334 (335)
++.+.+++..+|+|+.
T Consensus 312 ~~~~~~~~~~~kvvv~ 327 (334)
T PTZ00354 312 HTFLEQNKNIGKVVLT 327 (334)
T ss_pred HHHHHhCCCCceEEEe
Confidence 9999988888899885
No 32
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.3e-40 Score=303.70 Aligned_cols=320 Identities=33% Similarity=0.489 Sum_probs=277.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||+++.+++.+..+++.+.+.|.+.+++|+|++.++++|++|++...|..+. ....|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 89999998887777888888888889999999999999999999988876533 2345788999999999999999999
Q ss_pred CCCCCEEEEecC--CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccc
Q 019790 79 WKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH 156 (335)
Q Consensus 79 ~~~Gd~V~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~ 156 (335)
+++||+|+++.. .|+|++|+.++.+.++++|+++++++++++++.+++|| ++....+++++++++| +
T Consensus 81 ~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI----------~ 149 (324)
T cd08244 81 AWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLV----------T 149 (324)
T ss_pred CCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEE----------E
Confidence 999999999852 58999999999999999999999999999999999995 5557788999999999 9
Q ss_pred cccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhc
Q 019790 157 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236 (335)
Q Consensus 157 g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 236 (335)
|++|.+|.+++++|+.+|++|+++++++++.+.++++|++.++++.+..+.+.+.+.++++++|+++||+|+.....+++
T Consensus 150 g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~ 229 (324)
T cd08244 150 AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALA 229 (324)
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHH
Confidence 99999999999999999999999999999999999999988888888788888888888788999999999988888999
Q ss_pred cccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA 316 (335)
Q Consensus 237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 316 (335)
+++++|+++.+|........++...++.+++++.+........ ....+.++.+++++.++.+.+.+.+.|++++++
T Consensus 230 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 305 (324)
T cd08244 230 LLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAER----GGLRALEARALAEAAAGRLVPVVGQTFPLERAA 305 (324)
T ss_pred HhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCH----HHHHHHHHHHHHHHHCCCccCccceEEeHHHHH
Confidence 9999999999987654433455555678888988877654322 223445666888999999888788899999999
Q ss_pred HHHHHHHhCCCceeEEEeC
Q 019790 317 EAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 317 ~a~~~~~~~~~~gkvvi~~ 335 (335)
+|++.+.+++..||++++|
T Consensus 306 ~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 306 EAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHcCCCCceEEEeC
Confidence 9999999999999999876
No 33
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.7e-41 Score=312.91 Aligned_cols=305 Identities=22% Similarity=0.365 Sum_probs=256.2
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCC
Q 019790 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (335)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (335)
+++..++++ +++++.|.|.+.++||+|||.++++|++|++.+.+.......+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 456666654 88999999999999999999999999999998754433223458899999999999999999887 999
Q ss_pred EEEEe----------c-----------------CCcceeeEEEecCCceEeCCC------CCChhhhccCcchHHHHHHH
Q 019790 84 QVCAL----------L-----------------GGGGYAEKVAVPAGQVLPVPS------GVSLKDAAAFPEVACTVWST 130 (335)
Q Consensus 84 ~V~~~----------~-----------------~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~~~~~~~~a~~~ 130 (335)
+|+.. | .+|+|++|+.++.+.++++|+ ++++++++++++++.++|++
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 99762 1 258999999999999999999 89999999999999999999
Q ss_pred HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc---cHH
Q 019790 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---DFV 207 (335)
Q Consensus 131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~ 207 (335)
+. ..++++|++|+| +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++++.+. ++.
T Consensus 159 ~~-~~~~~~g~~VlV----------~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~ 226 (349)
T TIGR03201 159 AV-QAGLKKGDLVIV----------IGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVK 226 (349)
T ss_pred HH-hcCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHH
Confidence 85 578899999999 996 999999999999999999999999999999999999998887653 466
Q ss_pred HHHHHHhCCCccc----EEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH
Q 019790 208 ARVKEETGGKGVD----VILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 282 (335)
Q Consensus 208 ~~~~~~~~~~~~d----~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (335)
+.+++.+++.++| ++|||+|+.. +..++++++++|+++.+|..... ..++...++.++.++.+.+....
T Consensus 227 ~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~~~~----- 300 (349)
T TIGR03201 227 KLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWGCPP----- 300 (349)
T ss_pred HHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEecCCH-----
Confidence 7777888877886 8999999865 56789999999999999976532 35666677777888888764321
Q ss_pred HHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 283 ALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 283 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..++.+++++.+|++++ ++ +.|+|+|+++||+.+++++..||++++|
T Consensus 301 -----~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 301 -----DRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred -----HHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 12334889999999865 44 5789999999999999999889999875
No 34
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1e-40 Score=305.16 Aligned_cols=309 Identities=23% Similarity=0.273 Sum_probs=257.6
Q ss_pred CEEEEEcC-C-CCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCC
Q 019790 1 MKAIVITQ-P-GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76 (335)
Q Consensus 1 mka~~~~~-~-~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~ 76 (335)
||||++.. . +++ +.+++++.+.|+|+++||+|||.+++||+.|.+...+ . ..+|.++|+|++|+|++ .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---CC
Confidence 89999998 3 444 8899999999999999999999999999887652211 1 13478999999999985 44
Q ss_pred CCCCCCCEEEEecCCcceeeEEEecCC---ceEeCCCCCC-----hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeec
Q 019790 77 SRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVS-----LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFC 148 (335)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~ 148 (335)
+.|++||+|+++ ++|++|+.++.+ .++++|++++ ...+++++.+++|||+++.+..++++|+++||
T Consensus 76 ~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI--- 149 (329)
T cd08294 76 SKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVV--- 149 (329)
T ss_pred CCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEE---
Confidence 679999999987 579999999999 9999999988 23334688999999999988899999999999
Q ss_pred cccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+|++|++|++++|+|+.+|++|+++++++++.+.++++|++.++++.+.++.+.+++.++ +++|++||++|+
T Consensus 150 -------~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~ 221 (329)
T cd08294 150 -------NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGG 221 (329)
T ss_pred -------ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCH
Confidence 999999999999999999999999999999999999999999999988888888888776 689999999999
Q ss_pred hhHHHhhccccCCCEEEEEeccCCCcc------ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcc
Q 019790 229 SYFQRNLGSLNIDGRLFIIGTQGGAKT------ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 302 (335)
Q Consensus 229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 302 (335)
..+..++++++++|+++.+|....... ......+..+++++.++...... ....+.++.+++++.+|.+
T Consensus 222 ~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~l~~~g~i 296 (329)
T cd08294 222 EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ-----DRWPEALKQLLKWIKEGKL 296 (329)
T ss_pred HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhH-----HHHHHHHHHHHHHHHCCCC
Confidence 888899999999999999985432110 12234456678888876543221 1224456668899999999
Q ss_pred ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 303 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 303 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++.+..+|+++++++|++.+.+++..||+|++.
T Consensus 297 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 297 KYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 887767899999999999999999999999864
No 35
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.6e-41 Score=312.46 Aligned_cols=302 Identities=21% Similarity=0.257 Sum_probs=238.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCC--CCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||+++...+ ++ +++++.|.|+|.++||+|||.++|||++|++.+.|.++.. ..+|.++|||++|+|+++|++ ++
T Consensus 1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 8999998543 34 9999999999999999999999999999999999875432 235789999999999999999 99
Q ss_pred CCCCCEEEEec------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHH
Q 019790 79 WKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128 (335)
Q Consensus 79 ~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~ 128 (335)
|++||+|++.. .+|+|++|+.++.+.++++|++++ + ++++..+.++++
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~ 155 (355)
T cd08230 78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVE 155 (355)
T ss_pred CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHH
Confidence 99999998642 248899999999999999999998 4 444666766665
Q ss_pred HHHHHh------cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEE
Q 019790 129 STVFMT------SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCI 199 (335)
Q Consensus 129 ~~l~~~------~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~ 199 (335)
+++... .+.++|++++| +| .|++|++++|+|+.+|++|+++++ ++++++.++++|++. +
T Consensus 156 ~a~~~~~~~~~~~~~~~g~~vlI----------~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v 223 (355)
T cd08230 156 KAIEQAEAVQKRLPTWNPRRALV----------LG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-V 223 (355)
T ss_pred HHHHHHhhhhhhcccCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-e
Confidence 554322 23578999999 97 699999999999999999999987 678899999999987 4
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCC-CccccC----hhHHhhcceEEEEee
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELN----ITSLFAKRLTVQAAG 273 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~ 273 (335)
++.+.++.+ . +. ..++|++|||+|+. .+..+++.++++|+++.+|.... ...+++ ...++.+++++.|+.
T Consensus 224 ~~~~~~~~~-~-~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~ 299 (355)
T cd08230 224 NSSKTPVAE-V-KL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSV 299 (355)
T ss_pred cCCccchhh-h-hh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEec
Confidence 665555433 2 11 34799999999975 57889999999999999997765 233444 356677999999976
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHCCc------cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 274 LRSRSTENKALIVSEVEKNVWPAIAVGK------VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..... + ++.+++++.++. +++.++++|+++|+++|++.++++. .|+|+++
T Consensus 300 ~~~~~--~--------~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 300 NANKR--H--------FEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred CCchh--h--------HHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 54322 1 122556666554 6677899999999999999887544 5999875
No 36
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.2e-40 Score=306.91 Aligned_cols=306 Identities=21% Similarity=0.252 Sum_probs=244.6
Q ss_pred CcceEEEeecCCCCC-CCcEEEEEEEeecCcchhhhhcCCC--CCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe
Q 019790 12 PEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88 (335)
Q Consensus 12 ~~~l~~~~~~~~~~~-~~eVlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~ 88 (335)
++.+++++.+.|.|. ++||+|||.++|||+.|+....... .....+|.++|||++|+|+++|+++++|++||+|+++
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 578999999999874 9999999999999999864332111 1122357899999999999999999999999999886
Q ss_pred cCCcceeeEEEecCCceEeCCCCCChhh----hccCcchHHHHHHHHHHhcCCCCC--CEEEEeeccccccccccccchH
Q 019790 89 LGGGGYAEKVAVPAGQVLPVPSGVSLKD----AAAFPEVACTVWSTVFMTSHLSPG--ESFLVDFCSISYSDVHGGSSGI 162 (335)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~~~~~~~~a~~~l~~~~~~~~~--~~vli~~~~~~~~~~~g~~g~~ 162 (335)
. ++|++|++++++.++++|+++++.+ +++++.+++|||+++.+..+++++ ++||| +|++|++
T Consensus 100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI----------~ga~g~v 167 (345)
T cd08293 100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVV----------SGAAGAC 167 (345)
T ss_pred C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEE----------ECCCcHH
Confidence 3 6899999999999999999864322 456788999999999888888877 99999 9989999
Q ss_pred HHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790 163 GTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240 (335)
Q Consensus 163 G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 240 (335)
|++++|+|+++|+ +|+++++++++.+.+++ +|++.++++.+.++.+.+++.++ +++|++|||+|+..+..++++|++
T Consensus 168 G~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~ 246 (345)
T cd08293 168 GSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNE 246 (345)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhcc
Confidence 9999999999999 89999999999998876 99999999988888888888876 689999999999888889999999
Q ss_pred CCEEEEEeccCCCc--c----ccC--hhHH-hhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790 241 DGRLFIIGTQGGAK--T----ELN--ITSL-FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP 311 (335)
Q Consensus 241 ~G~~v~~g~~~~~~--~----~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 311 (335)
+|+++.+|...... . .+. ...+ ..++++......... .....+.++.+.+++.+|.+++.....++
T Consensus 247 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~~~~~~~ 321 (345)
T cd08293 247 NSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNY-----KDKFEEAIAQLSQWVKEGKLKVKETVYEG 321 (345)
T ss_pred CCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeecc-----HhHHHHHHHHHHHHHHCCCccceeEEeec
Confidence 99999998543210 1 111 1111 223444433322211 11223455668899999999887666679
Q ss_pred hhhHHHHHHHHHhCCCceeEEEeC
Q 019790 312 LCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 312 l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++++++|++.+.+++..||+|+++
T Consensus 322 l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 322 LENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEC
Confidence 999999999999998889999864
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=6.7e-41 Score=315.10 Aligned_cols=311 Identities=24% Similarity=0.314 Sum_probs=249.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhh-cCCCCC-----CCCCCCCCCCceEEEEEEecC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-----PKGASPYPGLECSGTILSVGK 74 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e~~G~V~~vG~ 74 (335)
|||+++..++. +++++.|.|.+.++||+|||.++|||++|++.+ .|.... ...+|.++|||++|+|+++|+
T Consensus 3 ~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 3 TKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred cEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 68888887653 999999999999999999999999999999976 453211 113688999999999999999
Q ss_pred CCC-CCCCCCEEEEec----------------CCcceeeEEEecCC----ceEeCCCCCChhhhccCcchHH--HHHHHH
Q 019790 75 NVS-RWKVGDQVCALL----------------GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVAC--TVWSTV 131 (335)
Q Consensus 75 ~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~~~~~--~a~~~l 131 (335)
+++ +|++||+|+... .+|+|++|+.++.+ .++++|+++++++++.+....+ +++.++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~ 159 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTAN 159 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhc
Confidence 998 699999998741 25899999999987 6899999999999885422222 233332
Q ss_pred --------HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC---eEEEEecChhhHHHHHHc-------
Q 019790 132 --------FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDL------- 193 (335)
Q Consensus 132 --------~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~---~V~~~~~~~~~~~~~~~~------- 193 (335)
.+..++++|++++| +|++|++|++++|+|+.+|+ +|+++++++++++.++++
T Consensus 160 ~~~~~~~~~~~~~~~~g~~VlV----------~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~ 229 (410)
T cd08238 160 YHLQPGEYRHRMGIKPGGNTAI----------LGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS 229 (410)
T ss_pred ccccccchhhhcCCCCCCEEEE----------EeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence 24567899999999 99899999999999999864 799999999999999886
Q ss_pred -CCC-EEEeCCC-ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccC-CC-ccccChhHHhhcce
Q 019790 194 -GAD-VCINYKT-EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GA-KTELNITSLFAKRL 267 (335)
Q Consensus 194 -g~~-~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~ 267 (335)
|++ .++++.+ .++.+.+++.+++.++|++||++|+ ..+..++++++++|+++.++... .. ..+++...++.+++
T Consensus 230 ~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~ 309 (410)
T cd08238 230 RGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNT 309 (410)
T ss_pred cCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCc
Confidence 665 4666654 5677888888888899999999985 55788999999999988775432 21 24567777888999
Q ss_pred EEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++.|+..... ..++++++++.+|++++ +++++|+|+|+++|++.+. ++..||+|+.+
T Consensus 310 ~i~g~~~~~~----------~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 310 HYVGTSGGNT----------DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred EEEEeCCCCH----------HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence 9999764322 12334889999999887 6799999999999999998 67779999865
No 38
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.8e-40 Score=307.60 Aligned_cols=309 Identities=28% Similarity=0.423 Sum_probs=259.5
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC---
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--- 78 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~--- 78 (335)
||+++..+++ .+++++.+.|.|.++||+|||.++++|++|++...|..+. ..+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccccc
Confidence 7899998874 4999999999999999999999999999999999887652 346889999999999999999986
Q ss_pred ---CCCCCEEEEec----------------------------------CCcceeeEEEecCC-ceEeCCCCCChhhhccC
Q 019790 79 ---WKVGDQVCALL----------------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (335)
Q Consensus 79 ---~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~ 120 (335)
|++||+|+.+. ..|+|++|+.++++ .++++|++++..+++++
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999998762 24899999999996 79999999999999988
Q ss_pred cchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEE
Q 019790 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
++++.|||+++.+...++++++||| +| +|.+|++++++|+.+|+ +|+++++++++.+.++++|++.++
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI----------~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVV----------QG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 8999999999977777779999999 97 69999999999999999 999999999999999999999888
Q ss_pred eCCCccH---HHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeec
Q 019790 200 NYKTEDF---VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGL 274 (335)
Q Consensus 200 ~~~~~~~---~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 274 (335)
+++...+ ...+++.++++++|++|||+|+ ..+..++++++++|+++.+|..... ..+++...++.+++++.++..
T Consensus 228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
T cd08231 228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN 307 (361)
T ss_pred cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence 7765443 3567888888899999999986 4578889999999999999876432 234555566888999988865
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHCC----ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 275 RSRSTENKALIVSEVEKNVWPAIAVG----KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..... +++ +++++.++ .+.++++++|+++|+++||+.+.+++. +|+||.|
T Consensus 308 ~~~~~------~~~----~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 308 YDPSH------LYR----AVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred CCchh------HHH----HHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 43211 122 55566555 355677899999999999999988775 7999986
No 39
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.5e-40 Score=303.89 Aligned_cols=301 Identities=20% Similarity=0.252 Sum_probs=248.4
Q ss_pred CCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe
Q 019790 9 PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88 (335)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~ 88 (335)
...++.+++.+.+.|+|++|||+|||.++++|+.++. |..+.. ..|.++|.|++|+|+++|+ .|++||+|+++
T Consensus 13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~ 85 (325)
T TIGR02825 13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS 85 (325)
T ss_pred CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence 3346889999999999999999999999999997654 332222 2378999999999999774 59999999987
Q ss_pred cCCcceeeEEEecCCceEeC----CCCCChhhh-ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHH
Q 019790 89 LGGGGYAEKVAVPAGQVLPV----PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIG 163 (335)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G 163 (335)
++|++|+.++.+.+.++ |++++++++ +++++++.|||+++.+..++++|++||| +|++|++|
T Consensus 86 ---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI----------~ga~g~vG 152 (325)
T TIGR02825 86 ---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMV----------NAAAGAVG 152 (325)
T ss_pred ---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEE----------eCCccHHH
Confidence 46999999999988877 899999987 6799999999999988899999999999 99999999
Q ss_pred HHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCC
Q 019790 164 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 242 (335)
Q Consensus 164 ~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G 242 (335)
++++|+|+.+|++|+++++++++.+.++++|++.++++.+. .+.+.++..+ ++++|++|||+|+..+..++++++++|
T Consensus 153 ~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G 231 (325)
T TIGR02825 153 SVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFG 231 (325)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999999998764 5555555554 458999999999988889999999999
Q ss_pred EEEEEeccCCCc----cc--cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790 243 RLFIIGTQGGAK----TE--LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA 316 (335)
Q Consensus 243 ~~v~~g~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 316 (335)
+++.+|...... .+ .....++.+++++.++....... ....+.++.+++++.+|++++.+...|++++++
T Consensus 232 ~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~ 307 (325)
T TIGR02825 232 RIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQG----EVRQKALKELLKWVLEGKIQYKEYVIEGFENMP 307 (325)
T ss_pred EEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhh----hhhHHHHHHHHHHHHCCCcccceeccccHHHHH
Confidence 999998654211 11 12344566788888775533211 112344566899999999998777889999999
Q ss_pred HHHHHHHhCCCceeEEEe
Q 019790 317 EAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 317 ~a~~~~~~~~~~gkvvi~ 334 (335)
+|++.+.+++..||+|++
T Consensus 308 ~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 308 AAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHhcCCCCCeEEeC
Confidence 999999999999999874
No 40
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5e-41 Score=304.46 Aligned_cols=291 Identities=19% Similarity=0.252 Sum_probs=232.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecC-cchhhhhcCCCCCC--CCCCCCCCCceEEEEEEecCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALN-RADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS 77 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~ 77 (335)
|||+++..++ .+++++.+.|+|+++||+|||.+++|| ++|++.+.|..+.. ..+|.++|||++|+|+++|+++
T Consensus 2 ~ka~~~~~~~---~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v- 77 (308)
T TIGR01202 2 TQAIVLSGPN---QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT- 77 (308)
T ss_pred ceEEEEeCCC---eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence 7899998654 499999999999999999999999996 69999888876432 2569999999999999999998
Q ss_pred CCCCCCEEEEec---------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeec
Q 019790 78 RWKVGDQVCALL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFC 148 (335)
Q Consensus 78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~ 148 (335)
+|++||+|+..+ ..|+|+||+.++++.++++|++++++. +.+ .+.+|||+++.+ . ..++++++|
T Consensus 78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV--- 150 (308)
T TIGR01202 78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLI--- 150 (308)
T ss_pred CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEE---
Confidence 599999998642 159999999999999999999999865 434 457899999854 3 346889999
Q ss_pred cccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790 149 SISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 227 (335)
+| +|++|++++|+|+++|++ |+++.+++++++.+... .++|+.+. .+.++|++|||+|
T Consensus 151 -------~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----------~~~g~Dvvid~~G 209 (308)
T TIGR01202 151 -------VG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD----------PRRDYRAIYDASG 209 (308)
T ss_pred -------EC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc----------cCCCCCEEEECCC
Confidence 87 799999999999999997 55556666666655443 33443211 2357999999999
Q ss_pred hh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--
Q 019790 228 AS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP-- 304 (335)
Q Consensus 228 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-- 304 (335)
+. .+..+++.++++|+++.+|..... ..++...++.+++++.++..... +.++.+++++++|++++
T Consensus 210 ~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~l~~~g~i~~~~ 278 (308)
T TIGR01202 210 DPSLIDTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRIAAEWQP----------GDLHAVRELIESGALSLDG 278 (308)
T ss_pred CHHHHHHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEEecccch----------hHHHHHHHHHHcCCCChhh
Confidence 85 478899999999999999976432 45666677788888887644321 12445999999999875
Q ss_pred ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 305 VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 305 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
++++.|+|+|+++|++.+.++...+|++++
T Consensus 279 ~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 279 LITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 679999999999999998777777899874
No 41
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=4e-40 Score=302.06 Aligned_cols=304 Identities=30% Similarity=0.462 Sum_probs=261.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.. +++++.+.|++.++||+||+.++++|++|++.+.|..+. ...|.++|||++|+|+++|+++++|+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGGP--LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCCC--ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccCC
Confidence 999999987543 899999999999999999999999999999998886543 23478999999999999999999999
Q ss_pred CCCEEEE----------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|+. +...|++++|+.++...++++|+++++++++.+++++++||+++.
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~ 157 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR 157 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 9999976 222588999999999999999999999999999999999999985
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
. .++.+++++|| +| +|.+|.+++++|+++|++|+++++++++++.++++|++.++++...++.+.+++
T Consensus 158 ~-~~~~~~~~vlV----------~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 225 (333)
T cd08296 158 N-SGAKPGDLVAV----------QG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQE 225 (333)
T ss_pred h-cCCCCCCEEEE----------EC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHh
Confidence 5 48999999999 98 899999999999999999999999999999999999999998887777776666
Q ss_pred HhCCCcccEEEeCCC-hhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 291 (335)
Q Consensus 213 ~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (335)
. +++|+++|++| +..+..++++++++|+++.+|... ...+++...++.+++++.++..... ..++
T Consensus 226 ~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~ 291 (333)
T cd08296 226 L---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGTA----------LDSE 291 (333)
T ss_pred c---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCCH----------HHHH
Confidence 5 36999999986 466788999999999999999765 3345666677789999998764321 1223
Q ss_pred HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.+++++.++.+++.+ +.|+++|+++||+.+.+++..||+|++
T Consensus 292 ~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 292 DTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 367778888888775 689999999999999999999999874
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=5.9e-40 Score=301.67 Aligned_cols=308 Identities=29% Similarity=0.440 Sum_probs=264.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||+++..++.+ +++.+.+.|.+.+++|+||+.++++|++|+....|.++. ...+|.++|+|++|+|+++|++++.
T Consensus 1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 899999987654 888899999999999999999999999999998887652 4456889999999999999999999
Q ss_pred CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (335)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l 131 (335)
|++||+|+++. .+|+|++|+.++.+.++++|++++++++++++..++|||+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l 158 (340)
T cd05284 79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158 (340)
T ss_pred CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999998763 258999999999999999999999999999999999999999
Q ss_pred HHh-cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHH
Q 019790 132 FMT-SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209 (335)
Q Consensus 132 ~~~-~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 209 (335)
... ..+.+++++|| +| .+.+|++++++|+.+| ++|+++++++++.+.++++|.+++++++.. +...
T Consensus 159 ~~~~~~~~~~~~vlI----------~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~ 226 (340)
T cd05284 159 KKALPYLDPGSTVVV----------IG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEE 226 (340)
T ss_pred HHhcccCCCCCEEEE----------Ec-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHH
Confidence 766 46889999999 98 5679999999999999 799999999999999999999999888777 8888
Q ss_pred HHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790 210 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSE 288 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (335)
+++.+++.++|+++||+|+ ..+..++++|+++|+++.+|.... ..++....+.+++++.+...... .
T Consensus 227 i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~----------~ 294 (340)
T cd05284 227 VRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGTR----------A 294 (340)
T ss_pred HHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEecccH----------H
Confidence 8888887789999999996 567888999999999999986543 23444444578888887654321 1
Q ss_pred HHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 289 VEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 289 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.++.+++++.+|.+++ ..+.|+++++++|++.+++++..||+|+.|
T Consensus 295 ~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 295 ELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2344788899998876 446799999999999999999999999876
No 43
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8e-40 Score=301.90 Aligned_cols=311 Identities=32% Similarity=0.493 Sum_probs=263.1
Q ss_pred CEEEEEcCCCCCcceEEEe-ecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-------------------CCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQE-VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------------------PKGASPY 60 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~-~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~~ 60 (335)
|||+++..++.+..+.+.+ .+.|.+.+++|+|||.++++|++|++.+.|.++. ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 8999999877766677765 4777789999999999999999999988775431 2346889
Q ss_pred CCCceEEEEEEecCCCCCCCCCCEEEEec-------------------CCcceeeEEEecCCceEeCCCCCChhhhccCc
Q 019790 61 PGLECSGTILSVGKNVSRWKVGDQVCALL-------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121 (335)
Q Consensus 61 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~ 121 (335)
+|||++|+|+++|+++++|++||+|++.. .+|++++|+.++...++++|+++++.++++++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 99999999999999999999999998741 24899999999999999999999999999999
Q ss_pred chHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 019790 122 EVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 201 (335)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~ 201 (335)
+++.+||+++ ...++++++++|| +|++|.+|++++++|+.+|++++++++++ +++.++++|++.+.+.
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI----------~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~ 228 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLV----------TGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILR 228 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEE----------EcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeC
Confidence 9999999998 7788999999999 99889999999999999999999988665 7888888998766665
Q ss_pred CCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhh
Q 019790 202 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN 281 (335)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (335)
....+.+ .+.+.++++|++|||+|+..+..++++++++|+++.+|........++...++.+++++.++....
T Consensus 229 ~~~~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 301 (350)
T cd08274 229 DAPLLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT----- 301 (350)
T ss_pred CCccHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC-----
Confidence 5444433 556677789999999999888899999999999999986543324566667678888988876532
Q ss_pred HHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 282 KALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
...++.+++++.++.+++.+.+.|+++++++|++.+..++..+|+|++|
T Consensus 302 -----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 302 -----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred -----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 1234448899999999888889999999999999999888889999986
No 44
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.2e-39 Score=297.13 Aligned_cols=320 Identities=30% Similarity=0.406 Sum_probs=275.3
Q ss_pred EEcCCCCCc--ceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCC
Q 019790 5 VITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82 (335)
Q Consensus 5 ~~~~~~~~~--~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 82 (335)
+++.++.+. .+++++.+.|++.+++|+||+.++++|+.|+..+.+..+.....|.++|+|++|+|+++|++++.+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G 81 (323)
T cd05282 2 VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVG 81 (323)
T ss_pred eeCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCC
Confidence 345666665 788999999999999999999999999999998887765444457899999999999999999999999
Q ss_pred CEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchH
Q 019790 83 DQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI 162 (335)
Q Consensus 83 d~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~ 162 (335)
|+|+++...|+|++|+.++.+.++++|+++++.+++.++....+||+++.....+.+++++|| +|+.+.+
T Consensus 82 d~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI----------~g~~~~v 151 (323)
T cd05282 82 QRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQ----------NAANSAV 151 (323)
T ss_pred CEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEE----------cccccHH
Confidence 999998645899999999999999999999999999999999999999988888899999999 9988999
Q ss_pred HHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCC
Q 019790 163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 242 (335)
Q Consensus 163 G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G 242 (335)
|++++++|+.+|++++++++++++.+.++++|.+.++++....+...+.+.++++++|+++||+|+......+++++++|
T Consensus 152 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g 231 (323)
T cd05282 152 GRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGG 231 (323)
T ss_pred HHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCC
Confidence 99999999999999999999999999999999999998887778888888888889999999999988788899999999
Q ss_pred EEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHH
Q 019790 243 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 322 (335)
Q Consensus 243 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~ 322 (335)
+++.+|........++...+..+++++.+...........+......++.+++++.++.+.+.+.+.|+++++++|++.+
T Consensus 232 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~ 311 (323)
T cd05282 232 TLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAA 311 (323)
T ss_pred EEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHH
Confidence 99999876544334555555558899888876543211012334556777899999999888778999999999999999
Q ss_pred HhCCCceeEEEe
Q 019790 323 ESSQHIGKIMLV 334 (335)
Q Consensus 323 ~~~~~~gkvvi~ 334 (335)
.+++..+|+|++
T Consensus 312 ~~~~~~~kvv~~ 323 (323)
T cd05282 312 EQPGRGGKVLLT 323 (323)
T ss_pred hcCCCCceEeeC
Confidence 998888898874
No 45
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.7e-39 Score=297.02 Aligned_cols=322 Identities=33% Similarity=0.467 Sum_probs=269.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++..+|.+..+++++.+.|.+.++||+||+.++++|++|++...|.++. ..+|.++|+|++|+|+.+|++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEEEeCCCCCCCC
Confidence 89999999998889999999999999999999999999999999988887643 23477899999999999999999999
Q ss_pred CCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790 81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS 159 (335)
Q Consensus 81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~ 159 (335)
+||+|+... ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....++++++++| +|+.
T Consensus 81 ~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI----------~g~~ 150 (327)
T PRK10754 81 VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLF----------HAAA 150 (327)
T ss_pred CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEE----------EeCC
Confidence 999998653 35889999999999999999999999999999999999999878889999999999 9989
Q ss_pred chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790 160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239 (335)
Q Consensus 160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~ 239 (335)
|.+|++++++|+.+|++|+++++++++.+.++++|++.+++.....+.+.+++.++++++|+++||+|+......+++++
T Consensus 151 g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~ 230 (327)
T PRK10754 151 GGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQ 230 (327)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999988888888888888899998889999999999988888999999
Q ss_pred CCCEEEEEeccCCCccccChhHHhhcceE-EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHH
Q 019790 240 IDGRLFIIGTQGGAKTELNITSLFAKRLT-VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAA 316 (335)
Q Consensus 240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~ 316 (335)
++|+++.+|.........+...+..++.. ........... ........++.+++++.+|.+++. ..+.|++++++
T Consensus 231 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~ 308 (327)
T PRK10754 231 RRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYIT--TREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQ 308 (327)
T ss_pred cCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccC--CHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHH
Confidence 99999999876532222333332222211 11111111111 111233455568899999998753 47889999999
Q ss_pred HHHHHHHhCCCceeEEEeC
Q 019790 317 EAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 317 ~a~~~~~~~~~~gkvvi~~ 335 (335)
++++.+.+++..+|+|++|
T Consensus 309 ~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 309 RAHEILESRATQGSSLLIP 327 (327)
T ss_pred HHHHHHHcCCCcceEEEeC
Confidence 9999999999999999986
No 46
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=9.9e-40 Score=299.73 Aligned_cols=310 Identities=33% Similarity=0.476 Sum_probs=249.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCC-CCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~ 79 (335)
||+++...++.. .++++.+.|.+.++||+|||.++|||+||++.+.+..+.... |. ++|||++|+|+++| .++.|
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~-~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPP-GDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCC-CCcccCccceEEEEEec-cccCC
Confidence 788887766543 346677667789999999999999999999999997655432 33 89999999999999 77889
Q ss_pred CCCCEEEEe------------------c--------------CCcceeeEEEecCCceEe-CCCCCChhhhccCcchHHH
Q 019790 80 KVGDQVCAL------------------L--------------GGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT 126 (335)
Q Consensus 80 ~~Gd~V~~~------------------~--------------~~g~~~~~~~~~~~~~~~-~p~~~~~~~aa~~~~~~~~ 126 (335)
++||||..- | .+|+|+||+.+|.+.++. +|+++ +.+++++..++.+
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~ 155 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLAT 155 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhh
Confidence 999999631 1 248999999999765555 57877 5666669999999
Q ss_pred HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCc
Q 019790 127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTE 204 (335)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 204 (335)
++++........++.+++| +| +|++|++++++++.+|+ +|+++++++++++.+++ .+++.+.+....
T Consensus 156 ~~~~~a~~~~~~~~~~V~V----------~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~ 224 (350)
T COG1063 156 AYHGHAERAAVRPGGTVVV----------VG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED 224 (350)
T ss_pred hhhhhhhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc
Confidence 9877545555566668999 87 89999999999999998 78888999999999998 667666665555
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 205 DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
+....+.+.+++.++|++|||+|... +..+++.++++|+++.+|........++...++.|++++.|+...... .
T Consensus 225 ~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~-~--- 300 (350)
T COG1063 225 DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGR-E--- 300 (350)
T ss_pred cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCc-c---
Confidence 67778888998889999999999754 788999999999999999887553357778889999999998432111 1
Q ss_pred HHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 335 (335)
.++.+++++.+|++.+ ++++.++++|+++|++.+.+.+. .-|+++.|
T Consensus 301 -----~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 301 -----DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -----cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1233889999999776 55899999999999999987554 45998875
No 47
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3.9e-40 Score=302.81 Aligned_cols=293 Identities=18% Similarity=0.221 Sum_probs=231.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC---CCCCCCCCCCceEEEEEEecCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---PKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|++++..++ .+++++.+.|+ +++||+|||.++|||++|++.+.|.... ...+|.++|||++|+|+++|.+ .
T Consensus 4 ~~~~~~~~~---~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 4 QVYRLVRPK---FFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cceEEeccc---eEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 477777655 49999999985 9999999999999999999999987532 1357999999999999998764 6
Q ss_pred CCCCCEEEEe------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh
Q 019790 79 WKVGDQVCAL------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134 (335)
Q Consensus 79 ~~~Gd~V~~~------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~ 134 (335)
|++||+|+.. ..+|+|+||+.+|++.++++|+++++++|+ +..+.+++|+++...
T Consensus 78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~ 156 (341)
T cd08237 78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRF 156 (341)
T ss_pred cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHH
Confidence 9999999753 135889999999999999999999999877 556889999988543
Q ss_pred --cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhh-CC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790 135 --SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210 (335)
Q Consensus 135 --~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (335)
..+++|++||| .| +|++|++++|++++ .| .+|+++++++++++.+++.+....++ .+
T Consensus 157 ~~~~~~~g~~VlV----------~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~---- 217 (341)
T cd08237 157 EQIAHKDRNVIGV----------WG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DI---- 217 (341)
T ss_pred hhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hh----
Confidence 35688999999 88 69999999999996 55 58999999999999888765543221 11
Q ss_pred HHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHH
Q 019790 211 KEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV 286 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
....++|++|||+|+ ..+..+++.++++|+++.+|.... ..+++...++.+++++.++.....
T Consensus 218 ---~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~~--------- 284 (341)
T cd08237 218 ---PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRSTR--------- 284 (341)
T ss_pred ---hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEecccCH---------
Confidence 112369999999995 347889999999999999997543 345677778889999998754321
Q ss_pred HHHHHHHHHHHHCC-----ccccccccccchh---hHHHHHHHHHhCCCceeEEEeC
Q 019790 287 SEVEKNVWPAIAVG-----KVKPVIYKYLPLC---EAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 287 ~~~~~~~~~~~~~g-----~~~~~~~~~~~l~---~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
..++.+++++.++ .+++.+++.|+++ +++++++.+.++ ..||+|+.+
T Consensus 285 -~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 285 -EDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred -HHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 1133488889988 5777889999985 666666666554 578999874
No 48
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.6e-39 Score=298.20 Aligned_cols=316 Identities=26% Similarity=0.380 Sum_probs=260.6
Q ss_pred EEEEEcCC---CCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790 2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 2 ka~~~~~~---~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
||+++..+ ++++.++..+.|.|+++++||+|||.++++|++|+..+.+..+. ..+|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVTL 79 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCCC
Confidence 68888887 77888999999999999999999999999999999988776532 335789999999999999999999
Q ss_pred CCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC-----CCEEEEeeccc
Q 019790 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVDFCSI 150 (335)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~-----~~~vli~~~~~ 150 (335)
|++||+|+++. ..|+|++|+.++.+.++++|+++++++++.++.+.+|||+++....++++ ++++||
T Consensus 80 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV----- 154 (336)
T TIGR02817 80 FKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLI----- 154 (336)
T ss_pred CCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEE-----
Confidence 99999999874 35899999999999999999999999999999999999999988888887 999999
Q ss_pred cccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-
Q 019790 151 SYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA- 228 (335)
Q Consensus 151 ~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~- 228 (335)
+|+++.+|++++|+|+.+ |++|+++++++++.+.++++|++.++++.. .+.+.+++. .++++|+++|++++
T Consensus 155 -----~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~-~~~~vd~vl~~~~~~ 227 (336)
T TIGR02817 155 -----IGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKL-GLEAVSYVFSLTHTD 227 (336)
T ss_pred -----EcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHh-cCCCCCEEEEcCCcH
Confidence 999999999999999998 999999999999999999999999988654 667777764 55689999999854
Q ss_pred hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH--HHHHHHHHHHHHHCCcccccc
Q 019790 229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI--VSEVEKNVWPAIAVGKVKPVI 306 (335)
Q Consensus 229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~ 306 (335)
......+++++++|+++.++.. ..++...+..+++++.+..+........... ....++.+++++.++.+++.+
T Consensus 228 ~~~~~~~~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 303 (336)
T TIGR02817 228 QHFKEIVELLAPQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTL 303 (336)
T ss_pred HHHHHHHHHhccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccc
Confidence 6678899999999999987532 2344444455556666544331111111111 124566688999999998776
Q ss_pred cccc---chhhHHHHHHHHHhCCCceeEEEe
Q 019790 307 YKYL---PLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 307 ~~~~---~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.+.+ +++++++|++.+.+++..||+++.
T Consensus 304 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 304 AETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred hhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 5555 479999999999999988998874
No 49
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=4.8e-39 Score=292.10 Aligned_cols=323 Identities=59% Similarity=0.969 Sum_probs=279.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++...+.+..+++.+.+.|.+.+++|+||+.++++|++|++...+..+.....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 99999998887777889888888889999999999999999999988876655555688999999999999999999999
Q ss_pred CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS 160 (335)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g 160 (335)
+||+|+++..+|+|++|+.++.+.++++|+++++.++++++.++.++|+++.+...+.++++++| +|+++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv----------~g~~~ 150 (323)
T cd05276 81 VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLI----------HGGAS 150 (323)
T ss_pred CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEE----------EcCcC
Confidence 99999999777999999999999999999999999999999999999999888888999999999 99899
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 240 (335)
.+|++++++++..|++|+++++++++.+.+++++.+.+++.....+...+.+.+.++++|++++|+|+..+...++++++
T Consensus 151 ~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~ 230 (323)
T cd05276 151 GVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAP 230 (323)
T ss_pred hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhcc
Confidence 99999999999999999999999999998988998888888777777778887777789999999999888888999999
Q ss_pred CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ 320 (335)
Q Consensus 241 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~ 320 (335)
+|+++.+|........++...++.+++++.++.................++.+++++.++++.+...+.|++++++++++
T Consensus 231 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 310 (323)
T cd05276 231 DGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHR 310 (323)
T ss_pred CCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHH
Confidence 99999998665433345555556788999888765432222223345566668889999998877888999999999999
Q ss_pred HHHhCCCceeEEE
Q 019790 321 LMESSQHIGKIML 333 (335)
Q Consensus 321 ~~~~~~~~gkvvi 333 (335)
.+.+++..+|+++
T Consensus 311 ~~~~~~~~~kvv~ 323 (323)
T cd05276 311 RMESNEHIGKIVL 323 (323)
T ss_pred HHHhCCCcceEeC
Confidence 9998888888774
No 50
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=4.5e-39 Score=293.69 Aligned_cols=316 Identities=22% Similarity=0.329 Sum_probs=260.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||++++.+++++.+++++.+.|.+.++||+||+.++++|++|+..+.|..+....+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 899999999887779999999999999999999999999999999988876544456789999999999998 456799
Q ss_pred CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC--C-CCCEEEEeecccc
Q 019790 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--S-PGESFLVDFCSIS 151 (335)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~--~-~~~~vli~~~~~~ 151 (335)
+||+|++.. .+|+|++|+.++.+.++++|+++++++++.+++.+.+||+++...... . .+++|+|
T Consensus 79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI------ 152 (325)
T cd05280 79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV------ 152 (325)
T ss_pred CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE------
Confidence 999999863 368999999999999999999999999999999999999998655433 5 3579999
Q ss_pred ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231 (335)
Q Consensus 152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 231 (335)
+|++|.+|++++++|+.+|++|+++++++++++.++++|++.+++.... .....+.+.++++|++|||+|+..+
T Consensus 153 ----~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~ 226 (325)
T cd05280 153 ----TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVL 226 (325)
T ss_pred ----ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHH
Confidence 9988999999999999999999999999999999999999888876543 2233444455579999999999888
Q ss_pred HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP 311 (335)
Q Consensus 232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 311 (335)
..++++++++|+++.+|........++...++.+++++.+......... .....++.+.+++..+ +.+.+..+|+
T Consensus 227 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~ 301 (325)
T cd05280 227 ANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPME----LRKQVWQKLATEWKPD-LLEIVVREIS 301 (325)
T ss_pred HHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchh----HHHHHHHHHHHHHhcC-CccceeeEec
Confidence 9999999999999999876543334555555578888888765533211 1223344466666666 4445778999
Q ss_pred hhhHHHHHHHHHhCCCceeEEEeC
Q 019790 312 LCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 312 l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++++++|++.+.+++..||+|+++
T Consensus 302 ~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 302 LEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHHHHHhcCCcceEEEEeC
Confidence 999999999999999999999864
No 51
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2.5e-39 Score=303.21 Aligned_cols=313 Identities=27% Similarity=0.471 Sum_probs=262.3
Q ss_pred CEEEEEc--CCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC---------CCCCCCCCCCceEEE
Q 019790 1 MKAIVIT--QPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGASPYPGLECSGT 68 (335)
Q Consensus 1 mka~~~~--~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~---------~~~~p~~~G~e~~G~ 68 (335)
|||+++. .++++ +.+++++.+.|+++++||+||+.++++|.+|++...+.... ....+.++|||++|+
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~ 92 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGI 92 (393)
T ss_pred hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEE
Confidence 7888875 34555 35899999999999999999999999999999887665110 011134889999999
Q ss_pred EEEecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccC
Q 019790 69 ILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (335)
Q Consensus 69 V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~ 120 (335)
|+++|++++.|++||+|++++ ..|+|++|+.++...++++|+++++++++.+
T Consensus 93 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l 172 (393)
T cd08246 93 VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAY 172 (393)
T ss_pred EEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhh
Confidence 999999999999999998864 2489999999999999999999999999999
Q ss_pred cchHHHHHHHHHHh--cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 121 PEVACTVWSTVFMT--SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 121 ~~~~~~a~~~l~~~--~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
+.++.|||+++... ++++++++++| +|+.|.+|++++++|+.+|++++++++++++.+.++++|++.+
T Consensus 173 ~~~~~tA~~al~~~~~~~~~~g~~vlV----------~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~ 242 (393)
T cd08246 173 MLVGATAYRMLFGWNPNTVKPGDNVLI----------WGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGV 242 (393)
T ss_pred cccHHHHHHHHhhcccccCCCCCEEEE----------ECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEE
Confidence 99999999998655 67899999999 9988999999999999999999999999999999999999988
Q ss_pred EeCCCc----------------------cHHHHHHHHhCCC-cccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc
Q 019790 199 INYKTE----------------------DFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT 255 (335)
Q Consensus 199 ~~~~~~----------------------~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 255 (335)
++.+.. .+.+.+.+.+++. ++|++|||+|+..+..++++++++|+++.+|.......
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 322 (393)
T cd08246 243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNH 322 (393)
T ss_pred EcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCC
Confidence 876432 2556778888877 89999999998778889999999999999987554334
Q ss_pred ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC-CCceeEEE
Q 019790 256 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-QHIGKIML 333 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi 333 (335)
.++...++.++.++.++..... +.++.+++++.++.+.+.+.++|+++|+++|++.+.++ +..||+++
T Consensus 323 ~~~~~~l~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 323 TYDNRYLWMRQKRIQGSHFAND----------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred CCcHHHHhhheeEEEecccCcH----------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 4566667778888888755432 12233788899999888778899999999999999988 78889876
No 52
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.9e-39 Score=293.68 Aligned_cols=312 Identities=29% Similarity=0.454 Sum_probs=268.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ +..+++++.+.|.+.++||+||+.++++|++|+..+.|..+.+...|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 9999998877 456999999999999999999999999999999998887655444577899999999999999999999
Q ss_pred CCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|+... ..|++++|+.++.+.++++|++++++++++++..+.|||+++.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~ 159 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK 159 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence 999998641 2588999999999999999999999999999999999999985
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
. .++++++++|| +|+.+.+|++++++|+++|++|+++++++++.+.++++|++.++++...++...+.+
T Consensus 160 ~-~~~~~~~~vlV----------~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 228 (341)
T cd08297 160 K-AGLKPGDWVVI----------SGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKE 228 (341)
T ss_pred h-cCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHH
Confidence 5 58999999999 998888999999999999999999999999999998999999998887788888888
Q ss_pred HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 291 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (335)
.++++++|+++||.++ ......+++++++|+++.+|.......+++...+..+++++.+..... .+.++
T Consensus 229 ~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 298 (341)
T cd08297 229 LTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT----------RQDLQ 298 (341)
T ss_pred HhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC----------HHHHH
Confidence 8888899999996664 567888999999999999986654333556666667888888754431 12344
Q ss_pred HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.+++++.++.+.+.+ ..|++++++++++.+..+...||+++++
T Consensus 299 ~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 299 EALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 488899999987655 6799999999999999999899999875
No 53
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.1e-38 Score=296.41 Aligned_cols=310 Identities=31% Similarity=0.470 Sum_probs=266.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC--
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR-- 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~-- 78 (335)
|||+++..++.+ +++++.+.|.++++||+||+.++++|++|++...+..+. .+|.++|||++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCC
Confidence 899999988644 888999999999999999999999999999988886643 45789999999999999999988
Q ss_pred -CCCCCEEEEe-------------------------------------------------cCCcceeeEEEecCCceEeC
Q 019790 79 -WKVGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPV 108 (335)
Q Consensus 79 -~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~ 108 (335)
|++||+|++. ...|++++|+.++.+.++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999872 13588999999999999999
Q ss_pred CCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhH
Q 019790 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL 187 (335)
Q Consensus 109 p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~ 187 (335)
|+++++.++++++..++|||+++.....+.+++++|| +| +|.+|++++++|+.+|++ |++++.++++.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI----------~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~ 225 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAV----------IG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKL 225 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 9999999999999999999999988888899999999 85 799999999999999997 88888899999
Q ss_pred HHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhc
Q 019790 188 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAK 265 (335)
Q Consensus 188 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 265 (335)
+.++++|.+.+++++...+...+++.++++++|++|||+++. ....++++++++|+++.+|..... ...++...++.+
T Consensus 226 ~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 305 (367)
T cd08263 226 AKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRR 305 (367)
T ss_pred HHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhC
Confidence 999999999999988888888888888778899999999987 778899999999999999865432 334555555568
Q ss_pred ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
++++.++..... .+.++.+++++.++.+++. +.+.+++++++++++.+++++..||+|+.
T Consensus 306 ~~~~~~~~~~~~---------~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 306 GIKIIGSYGARP---------RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CeEEEecCCCCc---------HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 888777432111 1234558899999998763 57889999999999999999988999873
No 54
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-38 Score=294.34 Aligned_cols=310 Identities=22% Similarity=0.333 Sum_probs=256.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++. +++++.+.|.+.++||+|||.++++|++|++.+.+..+. ...|.++|||++|+|+++|+++++|+
T Consensus 1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~ 76 (351)
T cd08285 1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFK 76 (351)
T ss_pred CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccC
Confidence 99999998764 788899999999999999999999999999988776543 23588999999999999999999999
Q ss_pred CCCEEEEec------------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHHH
Q 019790 81 VGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVW 128 (335)
Q Consensus 81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a~ 128 (335)
+||+|++.. .+|+|++|+.++.+ .++++|+++++++++.++.+++|||
T Consensus 77 ~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~ 156 (351)
T cd08285 77 PGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156 (351)
T ss_pred CCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence 999999742 25899999999974 8999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790 129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 207 (335)
Q Consensus 129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 207 (335)
+++ ....++++++||| +| +|++|++++|+|+.+|+ .|+++++++++.+.++++|++.++++...++.
T Consensus 157 ~~~-~~~~~~~g~~vlI----------~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 224 (351)
T cd08285 157 HGA-ELANIKLGDTVAV----------FG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVV 224 (351)
T ss_pred HHH-HccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHH
Confidence 996 6788999999999 96 79999999999999999 58888888999999999999999998887888
Q ss_pred HHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccCh--hHHhhcceEEEEeeccccchhhHH
Q 019790 208 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNI--TSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
+.+.+.+.++++|+++||+|+ ..+..++++++++|+++.+|..... ...++. .....+..++.+.......
T Consensus 225 ~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----- 299 (351)
T cd08285 225 EQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGR----- 299 (351)
T ss_pred HHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCcc-----
Confidence 888888877789999999997 4578899999999999999876542 123332 1122345556554322111
Q ss_pred HHHHHHHHHHHHHHHCCcccc---ccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKVKP---VIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 335 (335)
+.++.+++++.+|++++ .+.+.++++++++|++.+.+++. ..|+++++
T Consensus 300 ----~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 300 ----LRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ----ccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 12344889999999887 34567999999999999998874 57999864
No 55
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.4e-38 Score=293.86 Aligned_cols=310 Identities=30% Similarity=0.450 Sum_probs=264.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-----------CCCCCCCCCCceEEEE
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-----------PKGASPYPGLECSGTI 69 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~V 69 (335)
|||+++..++.+ +++++.|.|++.++||+||+.++++|++|++.+.|..+. ...+|.++|+|++|+|
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 899999888765 889999999999999999999999999999998876432 2234678999999999
Q ss_pred EEecCCCCCCCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcc
Q 019790 70 LSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (335)
Q Consensus 70 ~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~ 122 (335)
+++|++++.+++||+|+++. ..|++++|+.++.+.++++|+++++.+++++..
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 99999999999999998762 358899999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 019790 123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201 (335)
Q Consensus 123 ~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~ 201 (335)
.+++||+++.....+.++++++| +| .|.+|++++|+|+.+|+ +|+++++++++.+.++++|.+.+++.
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI----------~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 227 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVI----------IG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG 227 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence 99999999987777778999999 95 79999999999999999 78999989999999999999888888
Q ss_pred CCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh
Q 019790 202 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 280 (335)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (335)
++..+...+.+..++ ++|++|||+|+ .....++++|+++|+++.+|..... ...+...+..+++++.+......
T Consensus 228 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--- 302 (350)
T cd08240 228 SDPDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL--- 302 (350)
T ss_pred CCccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH---
Confidence 777777777777766 89999999985 5678899999999999999865543 23344444557888877655432
Q ss_pred hHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 281 NKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+.+..+++++.++.+++...+.|+++++++|++.+.+++..||+++++
T Consensus 303 -------~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 303 -------EELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred -------HHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 123348889999998877778899999999999999999889999875
No 56
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.1e-38 Score=286.88 Aligned_cols=303 Identities=28% Similarity=0.380 Sum_probs=257.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++...+ |..+++++.+.|.+.++||+||+.++++|+.|++...+.. .|.++|+|++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~-----~~~~~g~e~~G~v~~~G~~v~~~~ 74 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERP-----DGAVPGWDAAGVVERAAADGSGPA 74 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccCC-----CCCcccceeEEEEEEeCCCCCCCC
Confidence 8999998765 7779999999999999999999999999999998765221 256899999999999999999999
Q ss_pred CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS 160 (335)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g 160 (335)
+||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.+||+++...... ++++++| +|+.+
T Consensus 75 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli----------~g~~~ 143 (305)
T cd08270 75 VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLV----------TGASG 143 (305)
T ss_pred CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEE----------ECCCc
Confidence 999999987679999999999999999999999999999999999999999766655 5999999 99889
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 240 (335)
.+|.+++++++..|++|+++++++++.+.++++|++..++... +..+ +++|+++||+|+.....+++++++
T Consensus 144 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~ 214 (305)
T cd08270 144 GVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAP 214 (305)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999876554321 1222 479999999999888889999999
Q ss_pred CCEEEEEeccCCCccccChhHHhh--cceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHH
Q 019790 241 DGRLFIIGTQGGAKTELNITSLFA--KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA 318 (335)
Q Consensus 241 ~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a 318 (335)
+|+++.+|........++...+.. ++.++.++.+.. . ....+.++.+++++.++++++.+.++++++++++|
T Consensus 215 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 288 (305)
T cd08270 215 GGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD--G----EPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEA 288 (305)
T ss_pred CCEEEEEeccCCCcccccHHHHhcccccceEEEEEccC--H----HHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHH
Confidence 999999987653333455555544 588888877654 1 11234566688999999998878889999999999
Q ss_pred HHHHHhCCCceeEEEeC
Q 019790 319 HQLMESSQHIGKIMLVP 335 (335)
Q Consensus 319 ~~~~~~~~~~gkvvi~~ 335 (335)
++.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 289 AEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHcCCCCceEEEeC
Confidence 99999999889999864
No 57
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.4e-38 Score=297.28 Aligned_cols=309 Identities=28% Similarity=0.436 Sum_probs=260.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..+ +.+++++.+.|.+ .+++|+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~---~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~ 76 (386)
T cd08283 1 MKALVWHGK---GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRNL 76 (386)
T ss_pred CeeEEEecC---CCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCCC
Confidence 999999865 4489999999988 59999999999999999999999987553 358899999999999999999999
Q ss_pred CCCCEEEEec-----------------------------------------------CCcceeeEEEecCC--ceEeCCC
Q 019790 80 KVGDQVCALL-----------------------------------------------GGGGYAEKVAVPAG--QVLPVPS 110 (335)
Q Consensus 80 ~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~--~~~~~p~ 110 (335)
++||+|+... ..|+|++|+.++.+ .++++|+
T Consensus 77 ~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 77 KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 9999998742 14889999999988 8999999
Q ss_pred CCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHH
Q 019790 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV 189 (335)
Q Consensus 111 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~ 189 (335)
+++++++++++..+++||+++ ...++.++++||| +| +|.+|.+++++|+.+|+ +|+++++++++.+.
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV----------~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~ 224 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAV----------WG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEM 224 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 999999999999999999999 7889999999999 96 79999999999999998 59999999999999
Q ss_pred HHHcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChh----------------------hHHHhhccccCCCEEEE
Q 019790 190 CKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGAS----------------------YFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 190 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~----------------------~~~~~~~~l~~~G~~v~ 246 (335)
+++++...++++... ++...+.+.+.++++|++|||+|++ .+..++++++++|+++.
T Consensus 225 ~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 304 (386)
T cd08283 225 ARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSI 304 (386)
T ss_pred HHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEE
Confidence 998844467777666 4788888888877899999999753 46778999999999999
Q ss_pred EeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHh
Q 019790 247 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMES 324 (335)
Q Consensus 247 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~ 324 (335)
+|........++...++.+++++.+..... .+.++.+++++.++++.+ ++.+.|+++++++|++.+.+
T Consensus 305 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~ 374 (386)
T cd08283 305 IGVYGGTVNKFPIGAAMNKGLTLRMGQTHV----------QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDK 374 (386)
T ss_pred EcCCCCCcCccCHHHHHhCCcEEEeccCCc----------hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHh
Confidence 987654333455556678888888864211 223445888899999876 35688999999999999988
Q ss_pred CC-CceeEEEeC
Q 019790 325 SQ-HIGKIMLVP 335 (335)
Q Consensus 325 ~~-~~gkvvi~~ 335 (335)
++ ..+|+|++|
T Consensus 375 ~~~~~~k~~~~~ 386 (386)
T cd08283 375 KEDGCIKVVLKP 386 (386)
T ss_pred CCCCeEEEEecC
Confidence 76 568999986
No 58
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.5e-38 Score=290.60 Aligned_cols=317 Identities=21% Similarity=0.296 Sum_probs=252.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||++++.++++..+++++.+.|.+.++||+||+.++++|++|.....+.......+|.++|||++|+|+++| +++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 9999999988877899999999999999999999999999999876643222222357899999999999954 56799
Q ss_pred CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhc--C-CCCCCEEEEeecccc
Q 019790 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--H-LSPGESFLVDFCSIS 151 (335)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~--~-~~~~~~vli~~~~~~ 151 (335)
+||+|++.. ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.... . ..+++++||
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI------ 152 (326)
T cd08289 79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV------ 152 (326)
T ss_pred CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE------
Confidence 999999875 3699999999999999999999999999999999999998885433 2 345789999
Q ss_pred ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231 (335)
Q Consensus 152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 231 (335)
+|++|.+|.+++++|+.+|++|+++++++++.+.++++|++.+++..+. ..+.+.+.. ++++|++|||+|+..+
T Consensus 153 ----~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~-~~~~d~vld~~g~~~~ 226 (326)
T cd08289 153 ----TGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPLE-KQRWAGAVDPVGGKTL 226 (326)
T ss_pred ----EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhhc-cCCcCEEEECCcHHHH
Confidence 9988999999999999999999999999999999999999888876654 344555553 4679999999999888
Q ss_pred HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP 311 (335)
Q Consensus 232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 311 (335)
..++++++++|+++.+|.......+.+...++.+++++.+........... .+.+..+...+..+.+...+.++|+
T Consensus 227 ~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (326)
T cd08289 227 AYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELR----RRIWRRLATDLKPTQLLNEIKQEIT 302 (326)
T ss_pred HHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHH----HHHHHHHHhhcCccccccccceEee
Confidence 899999999999999997644333444556667899998875432111111 1222223333332333345688999
Q ss_pred hhhHHHHHHHHHhCCCceeEEEeC
Q 019790 312 LCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 312 l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++++++|++.+.+++..||+|+++
T Consensus 303 l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 303 LDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHHHHHhcCcccceEEEeC
Confidence 999999999999999999999864
No 59
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.7e-38 Score=293.35 Aligned_cols=310 Identities=28% Similarity=0.384 Sum_probs=262.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+ +++++.+.|++.++||+||+.++++|++|++...|..+ ..+|.++|+|++|+|+++|+++..|+
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 3 TTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred cEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEEEeCCCcccCC
Confidence 899999987654 88999999999999999999999999999999988764 23578999999999999999999999
Q ss_pred CCCEEEEe-------------------------------------------------cCCcceeeEEEecCCceEeCCCC
Q 019790 81 VGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPVPSG 111 (335)
Q Consensus 81 ~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~ 111 (335)
+||+|++. ...|+|++|+.++++.++++|++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999851 01378999999999999999999
Q ss_pred CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC 190 (335)
Q Consensus 112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~ 190 (335)
+++++++.+++++.+|++++.....+++++++|| +| .|.+|++++++|+.+|+ .++++++++++.+.+
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI----------~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~ 227 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAV----------FG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA 227 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 9999999999999999999888889999999999 96 69999999999999999 588888899999988
Q ss_pred HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceE
Q 019790 191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLT 268 (335)
Q Consensus 191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 268 (335)
+++|++.++++...++.+.+.+.+ +.++|+++||+|+ ..+..++++++++|+++.+|.... ....++...+..++++
T Consensus 228 ~~~g~~~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 306 (365)
T cd08278 228 KELGATHVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKT 306 (365)
T ss_pred HHcCCcEEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCce
Confidence 999999999888778888888888 6789999999986 457889999999999999987532 2345666666678888
Q ss_pred EEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc-ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP-VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+.++....... .+.++.+++++.++.+.+ .+...|+++++++|++.+++++.. |+|++
T Consensus 307 ~~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 307 IRGVIEGDSVP-------QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred EEEeecCCcCh-------HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 88776533211 223444788899998854 345689999999999999887764 88774
No 60
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.5e-38 Score=287.62 Aligned_cols=313 Identities=34% Similarity=0.555 Sum_probs=273.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++.+.+.++.+++++.+.|.+.++|++|++.++++|++|++...|..+.....|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 99999998876677999998888899999999999999999999998887655445688999999999999999999999
Q ss_pred CCCEEEEecC---------------------CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC
Q 019790 81 VGDQVCALLG---------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP 139 (335)
Q Consensus 81 ~Gd~V~~~~~---------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~ 139 (335)
+||+|++... +|+|++|+.++.+.++++|+++++.+++.++.++++||+++.....+.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 160 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP 160 (336)
T ss_pred CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence 9999998751 5889999999999999999999999999999999999999988889999
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCc
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKG 218 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~ 218 (335)
+++++| +| .+++|+++++++++.|++|+++++++++.+.+++++.+.+++... ..+...+.+.+++++
T Consensus 161 g~~vli----------~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (336)
T cd08276 161 GDTVLV----------QG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG 229 (336)
T ss_pred CCEEEE----------EC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC
Confidence 999999 85 899999999999999999999999999999998899988888776 678888888888889
Q ss_pred ccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHH
Q 019790 219 VDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298 (335)
Q Consensus 219 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (335)
+|+++||++......++++++++|+++.+|.............++.+++++.+..... ...++.+.+++.
T Consensus 230 ~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~ 299 (336)
T cd08276 230 VDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIE 299 (336)
T ss_pred CcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHH
Confidence 9999999998888889999999999999987665433455666678899999876543 123444778888
Q ss_pred CCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 299 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 299 ~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
++.+.+...+.+++++++++++.+.+++..+|++++
T Consensus 300 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 300 AHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred cCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 888877777899999999999999988888899875
No 61
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.4e-38 Score=288.62 Aligned_cols=314 Identities=29% Similarity=0.427 Sum_probs=266.1
Q ss_pred CEEEEEcCCCC--CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~--~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||+.+..++. ++.+++++.+.|.+.++||+||+.++++|++|++...|..+....+|.++|+|++|+|+.+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 99999999887 7889999999999999999999999999999999888876544456889999999999999999999
Q ss_pred CCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccc
Q 019790 79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGG 158 (335)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~ 158 (335)
|++||+|+++. .|+|++|+.++.+.++++|++ ..++++++.++.+||+++.+..+++++++++| +|+
T Consensus 82 ~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI----------~ga 148 (329)
T cd08250 82 FKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLV----------TAA 148 (329)
T ss_pred CCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEE----------EeC
Confidence 99999999885 488999999999999999997 35677899999999999988889999999999 999
Q ss_pred cchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccc
Q 019790 159 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238 (335)
Q Consensus 159 ~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l 238 (335)
+|.+|++++++|+..|++|+++++++++.+.++++|.+.+++.....+...+....+ +++|++|||+|+.....+++++
T Consensus 149 ~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~~l 227 (329)
T cd08250 149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVDNL 227 (329)
T ss_pred ccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999988888777777666666554 6899999999998888899999
Q ss_pred cCCCEEEEEeccCCCc----------cccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc--c
Q 019790 239 NIDGRLFIIGTQGGAK----------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--I 306 (335)
Q Consensus 239 ~~~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~ 306 (335)
+++|+++.+|...... ..++ ...+.+++++.+..+..... ...+.+..+++++.++.+.+. .
T Consensus 228 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~ 301 (329)
T cd08250 228 ALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK-----LIPQHLDRLLQLYQRGKLVCEVDP 301 (329)
T ss_pred ccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH-----HHHHHHHHHHHHHHCCCeeeeECC
Confidence 9999999998765321 1122 23456788888876543221 134456668899999988773 4
Q ss_pred ccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 307 YKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 307 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.+.++++++++|++.+.+++..+|++++
T Consensus 302 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 302 TRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 5669999999999999998888898874
No 62
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.2e-38 Score=287.26 Aligned_cols=313 Identities=23% Similarity=0.348 Sum_probs=259.2
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+++...+.++.+++++.|.|.+.++||+||+.++++|++|++.+.|..+.....|.++|||++|+|+. ++++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 6889998888888999999999999999999999999999999998887644344588899999999998 56678999
Q ss_pred CCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh--cCCCCCC-EEEEeeccccc
Q 019790 82 GDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGE-SFLVDFCSISY 152 (335)
Q Consensus 82 Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~--~~~~~~~-~vli~~~~~~~ 152 (335)
||+|+++. ..|++++|+.++.+.++++|++++++++++++..+.+|+.++... ..+.+++ +++|
T Consensus 79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI------- 151 (323)
T TIGR02823 79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLV------- 151 (323)
T ss_pred CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEE-------
Confidence 99999874 358999999999999999999999999999999999999887543 3378898 9999
Q ss_pred cccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHH
Q 019790 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 232 (335)
Q Consensus 153 ~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 232 (335)
+|++|.+|.+++++|+++|++++++++++++.+.++++|++.+++..+... .++..+.+ ++|+++||+|+..+.
T Consensus 152 ---~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~~~~ 225 (323)
T TIGR02823 152 ---TGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGHTLA 225 (323)
T ss_pred ---EcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCC-CceEEEECccHHHHH
Confidence 998899999999999999999999998998889999999988887654332 34445444 599999999998888
Q ss_pred HhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 019790 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 312 (335)
Q Consensus 233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 312 (335)
..+++++++|+++.+|.......+.+...++.+++++.+........ ......++.+.+++..+.+.+. .+.|++
T Consensus 226 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 300 (323)
T TIGR02823 226 NVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPM----ALREAAWQRLATDLKPRNLESI-TREITL 300 (323)
T ss_pred HHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCc----hhHHHHHHHHHHHhhcCCCcCc-eeeecH
Confidence 89999999999999997654333444455667889988876542211 1223345557777878887665 468999
Q ss_pred hhHHHHHHHHHhCCCceeEEEe
Q 019790 313 CEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 313 ~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+++++|++.+.+++..+|+|+.
T Consensus 301 ~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 301 EELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred HHHHHHHHHHhCCCccceEEEe
Confidence 9999999999999999999875
No 63
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.6e-38 Score=291.53 Aligned_cols=309 Identities=28% Similarity=0.446 Sum_probs=259.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..++. +.+.+.+.|.+ .++||+||+.++++|++|++.+.|.++. ..+|.++|+|++|+|+++|+++++|
T Consensus 1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~ 76 (347)
T cd05278 1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRL 76 (347)
T ss_pred CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCcccc
Confidence 89999987654 88999999999 9999999999999999999999887754 3458899999999999999999999
Q ss_pred CCCCEEEEe------------------------------cCCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHH
Q 019790 80 KVGDQVCAL------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV 127 (335)
Q Consensus 80 ~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a 127 (335)
++||+|++. ..+|+|++|++++.+ .++++|++++++++++++.+++||
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta 156 (347)
T cd05278 77 KPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG 156 (347)
T ss_pred CCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence 999999872 125899999999987 899999999999999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790 128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206 (335)
Q Consensus 128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 206 (335)
|+++ ...+++++++||| .| .|.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.++++.+..+
T Consensus 157 ~~~~-~~~~~~~~~~VlI----------~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 224 (347)
T cd05278 157 FHGA-ELAGIKPGSTVAV----------IG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDI 224 (347)
T ss_pred eehh-hhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchH
Confidence 9998 6788999999999 86 59999999999999997 8888888888888889999999998888778
Q ss_pred HHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790 207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI 285 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (335)
.+.+++.++++++|++|||+++ ..+..++++|+++|+++.+|..............+.+++++.+.....
T Consensus 225 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 295 (347)
T cd05278 225 VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV--------- 295 (347)
T ss_pred HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---------
Confidence 8888888887889999999997 567888999999999999985543311111222345677777654221
Q ss_pred HHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790 286 VSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 335 (335)
Q Consensus 286 ~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 335 (335)
.+.++.+++++.++.+++. +...|+++++++|++.+.+++. .+|+|++|
T Consensus 296 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 296 -RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 2244558889999998863 5688999999999999988776 68999886
No 64
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.6e-38 Score=290.49 Aligned_cols=309 Identities=30% Similarity=0.499 Sum_probs=266.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+ +++++.+.|.+.+++|+||+.++++|++|+....|..+. ..+|.++|+|++|.|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCC
Confidence 999999988765 899999999999999999999999999999998887653 34578999999999999999999999
Q ss_pred CCCEEEE---------------------------ecCCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (335)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l 131 (335)
+||+|++ +..+|+|++|+.++.. .++++|+++++++++.++.+.++||+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 157 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence 9999986 3346899999999975 8999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHH
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARV 210 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~ 210 (335)
....++.++++++| +| .|.+|++++++|+.+|++|+++++++++.+.++++|++.+++.+. .++...+
T Consensus 158 ~~~~~~~~~~~vlV----------~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 226 (345)
T cd08260 158 VHQARVKPGEWVAV----------HG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAV 226 (345)
T ss_pred HHccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHH
Confidence 88888999999999 98 799999999999999999999999999999999999999998887 6777778
Q ss_pred HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCc--cccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790 211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVS 287 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (335)
.+...+ ++|++|||+|+ ......+++++++|+++.+|...... ..+++..+..+++++.+..... .
T Consensus 227 ~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 295 (345)
T cd08260 227 RDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP----------A 295 (345)
T ss_pred HHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC----------H
Confidence 888777 89999999985 56778899999999999998765432 3455555667888888865422 1
Q ss_pred HHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 288 EVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 288 ~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
..++.+++++.++++.+. +.+.++++++++|++.+.+++..||+|++
T Consensus 296 ~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 296 HRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 234448889999988753 57889999999999999999988998875
No 65
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.2e-38 Score=296.12 Aligned_cols=314 Identities=27% Similarity=0.453 Sum_probs=263.8
Q ss_pred CEEEEEcC--CCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC---------CCCCC-CCCCCceEE
Q 019790 1 MKAIVITQ--PGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGAS-PYPGLECSG 67 (335)
Q Consensus 1 mka~~~~~--~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~e~~G 67 (335)
|||+++.. +++| +.+++.+.+.|.+.++||+||+.++++|.+|.+...+.... ....| .++|||++|
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G 87 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASG 87 (398)
T ss_pred hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEE
Confidence 89999965 6665 67999999999999999999999999999998776553210 00123 379999999
Q ss_pred EEEEecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhcc
Q 019790 68 TILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119 (335)
Q Consensus 68 ~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~ 119 (335)
+|+++|++++.|++||+|++.+ ..|+|++|+.++.+.++++|+++++++++.
T Consensus 88 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~ 167 (398)
T TIGR01751 88 VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAAC 167 (398)
T ss_pred EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhh
Confidence 9999999999999999998764 248999999999999999999999999999
Q ss_pred CcchHHHHHHHHHH--hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE
Q 019790 120 FPEVACTVWSTVFM--TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 197 (335)
Q Consensus 120 ~~~~~~~a~~~l~~--~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~ 197 (335)
+..+..+||+++.. ..++.++++++| +|++|.+|++++++|+.+|++++++++++++.+.++++|++.
T Consensus 168 ~~~~~~ta~~al~~~~~~~~~~g~~vlV----------~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~ 237 (398)
T TIGR01751 168 PGLTGATAYRQLVGWNPATVKPGDNVLI----------WGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEA 237 (398)
T ss_pred ccchHHHHHHHHhhhhccCCCCCCEEEE----------EcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCE
Confidence 99999999999854 477899999999 998899999999999999999999998999999999999999
Q ss_pred EEeCCCc----------------------cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc
Q 019790 198 CINYKTE----------------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT 255 (335)
Q Consensus 198 ~~~~~~~----------------------~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 255 (335)
++|.+.. .+.+.+.+.+.++++|++|||+|...+..++++++++|+++.+|.......
T Consensus 238 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 317 (398)
T TIGR01751 238 VIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNH 317 (398)
T ss_pred EecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCC
Confidence 8886542 245567777877889999999998778889999999999999987665444
Q ss_pred ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 256 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.++...++.++.++.++..... +.++.+++++.++.+.+.+.+++++++++++++.+.+++..||+|++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 386 (398)
T TIGR01751 318 DYDNRYLWMRQKRIQGSHFANL----------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVL 386 (398)
T ss_pred CcCHHHHhhcccEEEccccCcH----------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEE
Confidence 5566666677777777654321 11334888899999988888999999999999999999988999885
No 66
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.2e-37 Score=283.40 Aligned_cols=320 Identities=35% Similarity=0.568 Sum_probs=275.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++..++.+..+++.+.+.|.+.+++|+|++.++++|++|+....|..+.....|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 89999998776677899999999999999999999999999999988886654445688999999999999999999999
Q ss_pred CCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155 (335)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~ 155 (335)
+||+|+++. ..|++++|+.++.+.++++|+++++++++++++++.+||+++....++.++++++|
T Consensus 81 ~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI---------- 150 (325)
T cd08253 81 VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV---------- 150 (325)
T ss_pred CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE----------
Confidence 999999885 35899999999999999999999999999999999999999988789999999999
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 235 (335)
+|+++.+|.+++++++.+|++|+++++++++.+.+.++|.+.+++....++...+.+.+.++++|++++|+++......+
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~ 230 (325)
T cd08253 151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDL 230 (325)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHH
Confidence 99899999999999999999999999999999999889998888887777878888887777899999999998778889
Q ss_pred ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 019790 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA 315 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~ 315 (335)
++++++|+++.+|... .....+...++.++.++.+........ ....+..+.+.+++.++.+++...+.++++++
T Consensus 231 ~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 305 (325)
T cd08253 231 DVLAPGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTATP----EERAAAAEAIAAGLADGALRPVIAREYPLEEA 305 (325)
T ss_pred HhhCCCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhcCH----HHHHHHHHHHHHHHHCCCccCccccEEcHHHH
Confidence 9999999999998755 223444555556777777665433221 12344555577888888888878889999999
Q ss_pred HHHHHHHHhCCCceeEEEeC
Q 019790 316 AEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 316 ~~a~~~~~~~~~~gkvvi~~ 335 (335)
+++++.+.++...||+++++
T Consensus 306 ~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 306 AAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHcCCCcceEEEeC
Confidence 99999999988899999875
No 67
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6.8e-38 Score=290.55 Aligned_cols=310 Identities=25% Similarity=0.368 Sum_probs=264.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++++ +++++.+.|.+.+++|+|++.++++|++|+..+.|..+. .+|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccC
Confidence 999999988765 889999999999999999999999999999988886652 3577899999999999999999999
Q ss_pred CCCEEEEe-----------------------------------------------cCCcceeeEEEecCCceEeCCCCCC
Q 019790 81 VGDQVCAL-----------------------------------------------LGGGGYAEKVAVPAGQVLPVPSGVS 113 (335)
Q Consensus 81 ~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~ 113 (335)
+||+|++. ...|+|++|+.++.+.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99999983 2358899999999999999999999
Q ss_pred hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHH
Q 019790 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKD 192 (335)
Q Consensus 114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~ 192 (335)
+++++.+++.+.+||.++....++.+++++|| +| .|.+|.+++++|+.+|++ |+++++++++.+.+++
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI----------~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~ 225 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAV----------IG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR 225 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence 99999999999999999888889999999999 95 699999999999999996 9999999999999989
Q ss_pred cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceEEE
Q 019790 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQ 270 (335)
Q Consensus 193 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~ 270 (335)
+|++.+++++...+...+.+.+.++++|+++||+++ ..+..++++++++|+++.+|.... ....++...+..++.++.
T Consensus 226 ~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 305 (363)
T cd08279 226 FGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQ 305 (363)
T ss_pred hCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEE
Confidence 999899988877888888888877789999999995 567888999999999999986552 234566666666777777
Q ss_pred EeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEE
Q 019790 271 AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIM 332 (335)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvv 332 (335)
++.+..... .+.++.+++++.++.+++ .+.++|+++|+++|++.+.+++..+.+|
T Consensus 306 ~~~~~~~~~-------~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 306 GSLYGSANP-------RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred EEEecCcCc-------HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 765533211 234555888999998876 3678899999999999999888765554
No 68
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.7e-37 Score=282.53 Aligned_cols=324 Identities=60% Similarity=0.976 Sum_probs=279.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+.+..++.+..+++++.+.+.+.+++|+|++.++++|++|+....+..+.+..+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 89999998887777888888777789999999999999999999988776654444578999999999999999999999
Q ss_pred CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS 160 (335)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g 160 (335)
+||+|++++.+|+|++|+.++...++++|+++++.++++++.+..++|+++.+...+.++++++| +|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv----------~g~~~ 150 (325)
T TIGR02824 81 VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLI----------HGGAS 150 (325)
T ss_pred CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEE----------EcCcc
Confidence 99999998777999999999999999999999999999999999999999878899999999999 99899
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 240 (335)
.+|.+++++++.+|++|+++++++++.+.++++|.+.+++.....+...+...+.++++|++++|+|+..+...++++++
T Consensus 151 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~ 230 (325)
T TIGR02824 151 GIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALAL 230 (325)
T ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhcc
Confidence 99999999999999999999999998888888998888877777777788887777789999999998878889999999
Q ss_pred CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ 320 (335)
Q Consensus 241 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~ 320 (335)
+|+++.+|........++...++.+++++.+..................+..+++++.++.+++..++.+++++++++++
T Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 310 (325)
T TIGR02824 231 DGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHA 310 (325)
T ss_pred CcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHH
Confidence 99999998755332345566666889999988765532222223345566668889999998877888899999999999
Q ss_pred HHHhCCCceeEEEe
Q 019790 321 LMESSQHIGKIMLV 334 (335)
Q Consensus 321 ~~~~~~~~gkvvi~ 334 (335)
.+.++...+|++++
T Consensus 311 ~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 311 LMESGDHIGKIVLT 324 (325)
T ss_pred HHHhCCCcceEEEe
Confidence 99988888898875
No 69
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.2e-37 Score=286.18 Aligned_cols=306 Identities=32% Similarity=0.488 Sum_probs=260.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ .+++.+.+.|.+.++||+|||.++++|+.|+....+..+.. .+|.++|+|++|+|+++|+++++|+
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (337)
T cd08261 1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLK 76 (337)
T ss_pred CeEEEEeCCC---ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCC
Confidence 8999998765 48999999999999999999999999999999988876543 3477899999999999999999999
Q ss_pred CCCEEEE---------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|++ +...|+|++|+.++++ ++++|+++++++++++ ..++++++++ .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~ 153 (337)
T cd08261 77 VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-R 153 (337)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-H
Confidence 9999987 3235899999999999 9999999999999876 6778888888 7
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
..++.+++++|| +| ++.+|.+++++|+.+|++|+++++++++.+.++++++++++++....+.+.+.+.
T Consensus 154 ~~~l~~g~~vLI----------~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~ 222 (337)
T cd08261 154 RAGVTAGDTVLV----------VG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLREL 222 (337)
T ss_pred hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHH
Confidence 789999999999 96 7999999999999999999999999999999999999999998887888888888
Q ss_pred hCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292 (335)
Q Consensus 214 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (335)
+.++++|+++||+|+ ..+..++++|+++|+++.+|.... ...++...+..+++++.+... . ..+.++.
T Consensus 223 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~ 291 (337)
T cd08261 223 TDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG-PVTFPDPEFHKKELTILGSRN---A-------TREDFPD 291 (337)
T ss_pred hCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-CCccCHHHHHhCCCEEEEecc---C-------ChhhHHH
Confidence 888889999999986 457888999999999999886542 234445555667777766421 1 1223445
Q ss_pred HHHHHHCCcccc--ccccccchhhHHHHHHHHHhC-CCceeEEEeC
Q 019790 293 VWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESS-QHIGKIMLVP 335 (335)
Q Consensus 293 ~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~~ 335 (335)
+.+++.+|.+++ .+...+++++++++++.+.++ ...+|+|++.
T Consensus 292 ~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 292 VIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 888999999987 677889999999999999988 4778999863
No 70
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=2.3e-37 Score=280.67 Aligned_cols=320 Identities=36% Similarity=0.523 Sum_probs=273.9
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+....++.+..+.+.+.+.+.+.+++|+|+|.++++|++|++...+..+. .+|.++|||++|+|+.+|+++.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKV 78 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCC
Confidence 5788887777777888888888889999999999999999999988876543 34678999999999999999999999
Q ss_pred CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG 161 (335)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~ 161 (335)
||+|+++...|++++|+.++.+.++++|++++..+++.++...+++++++....++.++++++| +|++|.
T Consensus 79 G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI----------~g~~g~ 148 (320)
T cd05286 79 GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLV----------HAAAGG 148 (320)
T ss_pred CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE----------EcCCch
Confidence 9999988535889999999999999999999999999999999999999988889999999999 998999
Q ss_pred HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCC
Q 019790 162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 241 (335)
Q Consensus 162 ~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~ 241 (335)
+|++++++++.+|++|+++++++++.+.++++|.+.+++.....+...+.+.+.++++|++++|+++.....++++++++
T Consensus 149 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~ 228 (320)
T cd05286 149 VGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPR 228 (320)
T ss_pred HHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccC
Confidence 99999999999999999999999999999999998888877777888888888888899999999988788899999999
Q ss_pred CEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 019790 242 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321 (335)
Q Consensus 242 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~ 321 (335)
|+++.+|........++...+..+++++.+........ ........++.+++++.++.+++...+.|++++++++++.
T Consensus 229 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 306 (320)
T cd05286 229 GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIA--TREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRD 306 (320)
T ss_pred cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcC--CHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHH
Confidence 99999987654333345544447788887655433221 1223445566688899999888777788999999999999
Q ss_pred HHhCCCceeEEEeC
Q 019790 322 MESSQHIGKIMLVP 335 (335)
Q Consensus 322 ~~~~~~~gkvvi~~ 335 (335)
+.+++..+|++++|
T Consensus 307 ~~~~~~~~~vv~~~ 320 (320)
T cd05286 307 LESRKTTGKLLLIP 320 (320)
T ss_pred HHcCCCCceEEEeC
Confidence 99988889999987
No 71
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=9.8e-38 Score=286.84 Aligned_cols=304 Identities=25% Similarity=0.345 Sum_probs=249.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ .+++++.+.|.|.++||+||+.++++|++|++.+.|..+.. .+|.++|||++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (339)
T PRK10083 1 MKSIVIEKPN---SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAAR 76 (339)
T ss_pred CeEEEEecCC---eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCC
Confidence 8999999765 48999999999999999999999999999999988876432 4588999999999999999999999
Q ss_pred CCCEEE---------------------------EecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVC---------------------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|+ ++..+|+|++|+.++.+.++++|+++++++++ +..++.+++++. .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~ 154 (339)
T PRK10083 77 IGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-G 154 (339)
T ss_pred CCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-H
Confidence 999998 44446899999999999999999999998876 667788888644 7
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhh-CCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (335)
..++++|++|+| +| .|.+|++++|+|+. +|++ ++++++++++.+.++++|++.++++.+..+.+.+.
T Consensus 155 ~~~~~~g~~vlI----------~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~ 223 (339)
T PRK10083 155 RTGPTEQDVALI----------YG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALE 223 (339)
T ss_pred hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHh
Confidence 788999999999 99 79999999999997 5995 77777889999999999999999887766666654
Q ss_pred HHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHH
Q 019790 212 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE 290 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (335)
.. +.++|++|||+|+ ..+..++++++++|+++.+|.... ...++...+..+++++.+.... .+.+
T Consensus 224 ~~--g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 289 (339)
T PRK10083 224 EK--GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN-----------ANKF 289 (339)
T ss_pred cC--CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC-----------hhhH
Confidence 31 2346799999995 467889999999999999987543 2333444445577777665431 1123
Q ss_pred HHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 019790 291 KNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP 335 (335)
Q Consensus 291 ~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~ 335 (335)
+.+++++.+|.+++ ++.+.|+++++++|++.+.++. ..+|+++.+
T Consensus 290 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 290 PVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred HHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 44888999999887 4678999999999999998653 568999864
No 72
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=287.97 Aligned_cols=319 Identities=40% Similarity=0.567 Sum_probs=255.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCC---CCCCCCCCceEEE---EEEec-C
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK---GASPYPGLECSGT---ILSVG-K 74 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~vG-~ 74 (335)
+......++.......++.+.|.|.+++++|++.++++|+.|+.+..|...... .+|.+++.++.|. +...| .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~ 86 (347)
T KOG1198|consen 7 RVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDD 86 (347)
T ss_pred eEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccc
Confidence 344445555667778888899999999999999999999999999999987766 6775555555544 44555 3
Q ss_pred CCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhc------CCCCCCEEEEeec
Q 019790 75 NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS------HLSPGESFLVDFC 148 (335)
Q Consensus 75 ~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~------~~~~~~~vli~~~ 148 (335)
.+..+..||.+.....+|+|+||.++|...++++|+++++++||+++.++.|||.++.... ++++|++|||
T Consensus 87 ~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv--- 163 (347)
T KOG1198|consen 87 VVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV--- 163 (347)
T ss_pred cccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE---
Confidence 3456888888888888999999999999999999999999999999999999999999999 8999999999
Q ss_pred cccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+||+|++|++++|+|++.|+..++++++++..+.++++|++.++||++.++.+.+++.+ +++||+||||+|+
T Consensus 164 -------~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~ 235 (347)
T KOG1198|consen 164 -------LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGG 235 (347)
T ss_pred -------EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCC
Confidence 99999999999999999997666666699999999999999999999999999999998 7899999999999
Q ss_pred hhHHHhhccccCCCEEEEEeccCCCccccChhHHh--hcc-----eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790 229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF--AKR-----LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 301 (335)
Q Consensus 229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 301 (335)
........++...|+...++.............++ .+. ..+.+.......... ..+.++.+.+++.+|+
T Consensus 236 ~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~l~~~ie~gk 311 (347)
T KOG1198|consen 236 STLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVP----SAEYLKALVELIEKGK 311 (347)
T ss_pred CccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecC----CHHHHHHHHHHHHcCc
Confidence 88777888888888765555444322111111111 111 111111111111111 1344555899999999
Q ss_pred cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 302 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 302 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++|.+.+.||++++++|++.+.+++..||+++.+
T Consensus 312 ikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 312 IKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred ccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence 9999999999999999999999999999999864
No 73
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.6e-37 Score=284.92 Aligned_cols=310 Identities=32% Similarity=0.475 Sum_probs=267.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++..++++. +.+.+.+.|.+.+++|+|++.++++|+.|.....|..+.....|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 8999999988876 788888999999999999999999999999999887764445578899999999999999999999
Q ss_pred CCCEEEE------------------ec---------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCA------------------LL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|+. ++ .+|+|++|+.++.+.++++|+++++++++.++.++++||+++..
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~ 159 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR 159 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 9999986 22 25899999999999999999999999999999999999999988
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
...+.+++++|| .| +|.+|.+++++|+.+|++|+++++++++.+.++++|.+.+++.....+.+.+ +.
T Consensus 160 ~~~~~~~~~vli----------~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 227 (338)
T cd08254 160 AGEVKPGETVLV----------IG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AA 227 (338)
T ss_pred ccCCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HH
Confidence 888999999999 86 6999999999999999999999999999999999999888887776666666 66
Q ss_pred hCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292 (335)
Q Consensus 214 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (335)
+.++++|+++||+|. ..+..++++|+++|+++.+|.... ...++...++.++.++.+.+... ...++.
T Consensus 228 ~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 296 (338)
T cd08254 228 GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGGT----------PEDLPE 296 (338)
T ss_pred hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEeccCC----------HHHHHH
Confidence 777789999999985 467889999999999999976442 23455666777888888765332 123444
Q ss_pred HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 293 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+.+++.++.+++. .+.+++++++++++.+.+++..||+|++|
T Consensus 297 ~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 297 VLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 8888999998876 67899999999999999999999999987
No 74
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=3e-37 Score=284.35 Aligned_cols=308 Identities=23% Similarity=0.403 Sum_probs=260.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..++. +++++.+.|+| .++||+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++++
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 76 (345)
T cd08286 1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNF 76 (345)
T ss_pred CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCcccc
Confidence 89999987764 89999999886 89999999999999999999998876543 347899999999999999999999
Q ss_pred CCCCEEEEec----------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHHHH
Q 019790 80 KVGDQVCALL----------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWS 129 (335)
Q Consensus 80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~ 129 (335)
++||+|+... .+|+|++|+.++.+ .++++|++++..+++.++..+++||+
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 156 (345)
T cd08286 77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156 (345)
T ss_pred CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence 9999998742 13889999999987 89999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHH
Q 019790 130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208 (335)
Q Consensus 130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 208 (335)
++....++.+++++|| +| .|.+|.+++|+|+.+| .+|+++.+++++...++++|++.++++...++..
T Consensus 157 ~~~~~~~~~~g~~vlI----------~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~ 225 (345)
T cd08286 157 CGVLNGKVKPGDTVAI----------VG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIE 225 (345)
T ss_pred HHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHH
Confidence 8777788999999999 87 5999999999999999 6999988888888888999999999888777878
Q ss_pred HHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790 209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS 287 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (335)
.+.+.+.+.++|++|||+|. ..+..+++.|+++|+++.+|.... ...+++..++.+++++.+.....
T Consensus 226 ~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------- 293 (345)
T cd08286 226 QVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGLVDT----------- 293 (345)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeecCch-----------
Confidence 88888888889999999986 456788899999999999986543 24566666677888888753321
Q ss_pred HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC--CceeEEEeC
Q 019790 288 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ--HIGKIMLVP 335 (335)
Q Consensus 288 ~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~ 335 (335)
..++.+.+++.++.+++ ++.++|+++++++|++.+.... ...|++|+|
T Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 294 NTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 12344778888998865 3578999999999999998763 345999876
No 75
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.1e-37 Score=280.67 Aligned_cols=309 Identities=31% Similarity=0.491 Sum_probs=258.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++...+.+..+++.+.+.|.+.++||+||+.++++|++|++...+..+. ...|.++|||++|+|+++|. ..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~ 77 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFT 77 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCC
Confidence 89999998887777888888888899999999999999999999988876532 23478899999999999995 5799
Q ss_pred CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccc
Q 019790 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSD 154 (335)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~ 154 (335)
+||+|+++. .+|+|++|+.++...++++|+++++++++.++.++.+||+++.....+.+++++||
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV--------- 148 (320)
T cd08243 78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLI--------- 148 (320)
T ss_pred CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEE---------
Confidence 999999885 24899999999999999999999999999999999999999988888999999999
Q ss_pred cccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234 (335)
Q Consensus 155 ~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 234 (335)
+|++|.+|++++++|+++|++|+++++++++.+.++++|++.+++. ..++.+.+++. ++++|+++||+|+..+...
T Consensus 149 -~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~ 224 (320)
T cd08243 149 -RGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDS 224 (320)
T ss_pred -EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHH
Confidence 9989999999999999999999999999999999999999887754 44666677776 5689999999999888889
Q ss_pred hccccCCCEEEEEeccCCCcc--ccChhHH--hhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccccccccc
Q 019790 235 LGSLNIDGRLFIIGTQGGAKT--ELNITSL--FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 310 (335)
Q Consensus 235 ~~~l~~~G~~v~~g~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 310 (335)
+++++++|+++.+|....... ....... +.+++++.+....... ...++.+.+++.++.+++.+.+.+
T Consensus 225 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 296 (320)
T cd08243 225 LRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP--------QTPLQELFDFVAAGHLDIPPSKVF 296 (320)
T ss_pred HHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh--------HHHHHHHHHHHHCCceecccccEE
Confidence 999999999999987543211 1112222 2456666665433211 224455888899999888778899
Q ss_pred chhhHHHHHHHHHhCCCceeEEE
Q 019790 311 PLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 311 ~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
+++++++|++.+.+++..+|+|+
T Consensus 297 ~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 297 TFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cHHHHHHHHHHHHhCCCCCcEEe
Confidence 99999999999999888888876
No 76
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=2.4e-37 Score=284.15 Aligned_cols=304 Identities=26% Similarity=0.411 Sum_probs=254.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++.+++++ ..+++.+.|.+.++||+||+.++++|++|++.+.|..+.. .|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~--~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDK--TGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCC--CCccCCcccceEEEEECCCCccCC
Confidence 999999988764 2378899999999999999999999999999888865432 367899999999999999999999
Q ss_pred CCCEEEE-----------ec-----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCA-----------LL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|++ ++ .+|+|++|+.++.+.++++|++++++++++++.+++|||+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~- 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI- 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-
Confidence 9999986 22 258999999999999999999999999999999999999998
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARV 210 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~ 210 (335)
...++++++++|| +| .|++|++++++|+.+ |++|+++++++++++.++++|++.+++++. ..+.+.+
T Consensus 156 ~~~~~~~g~~vlV----------~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v 224 (338)
T PRK09422 156 KVSGIKPGQWIAI----------YG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKII 224 (338)
T ss_pred HhcCCCCCCEEEE----------EC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHH
Confidence 7788999999999 98 699999999999985 999999999999999999999998888754 5566677
Q ss_pred HHHhCCCccc-EEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790 211 KEETGGKGVD-VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV 289 (335)
Q Consensus 211 ~~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (335)
++.++ ++| +++++.++..+..++++++++|+++.+|.... ...++...+..+..++.++..... +.
T Consensus 225 ~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 291 (338)
T PRK09422 225 QEKTG--GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGTR----------QD 291 (338)
T ss_pred HHhcC--CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCCH----------HH
Confidence 77665 588 55566666778889999999999999986543 234455556667788876543221 12
Q ss_pred HHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 290 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 290 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
++.+++++.+|.+.+.+. .++++++++|++.+.+++..||+++.
T Consensus 292 ~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 292 LEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred HHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 344888899998877654 58999999999999999999999885
No 77
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=7.4e-38 Score=287.68 Aligned_cols=313 Identities=29% Similarity=0.396 Sum_probs=257.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ +..+++++.+.|++.++||+||+.++++|++|++...+.. ....|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcCC
Confidence 9999999887 6779999999999999999999999999999998876654 112367899999999999999999999
Q ss_pred CCCEEEEecC--------CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC----------CCCCE
Q 019790 81 VGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----------SPGES 142 (335)
Q Consensus 81 ~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~----------~~~~~ 142 (335)
+||+|+++.. +|+|++|+.++.+.++++|+++++++++.++.++.+||+++....++ .++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (339)
T cd08249 78 VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKP 157 (339)
T ss_pred CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCE
Confidence 9999999864 48999999999999999999999999999999999999998766554 78999
Q ss_pred EEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEE
Q 019790 143 FLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 222 (335)
Q Consensus 143 vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 222 (335)
++| +|++|.+|++++++|+.+|++|++++ ++++.+.++++|++.++++....+.+.+++.++ +++|++
T Consensus 158 vlI----------~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~v 225 (339)
T cd08249 158 VLI----------WGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYA 225 (339)
T ss_pred EEE----------EcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEE
Confidence 999 99889999999999999999999888 568888888999999999888888888877766 579999
Q ss_pred EeCCCh-hhHHHhhccccC--CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccch--hhHHHHHHHHHHHHHHHH
Q 019790 223 LDCMGA-SYFQRNLGSLNI--DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAI 297 (335)
Q Consensus 223 id~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 297 (335)
+|++|+ ..+..+++++++ +|+++.+|...... . ...+.+........... ..........++.+.+++
T Consensus 226 l~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (339)
T cd08249 226 LDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-E------PRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELL 298 (339)
T ss_pred EEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-c------CCCCceEEEEEeeeecccccccccchHHHHHHHHHHH
Confidence 999998 778899999999 99999998654332 0 11222222222111100 001112234555688899
Q ss_pred HCCccccccccccc--hhhHHHHHHHHHhCC-CceeEEEeC
Q 019790 298 AVGKVKPVIYKYLP--LCEAAEAHQLMESSQ-HIGKIMLVP 335 (335)
Q Consensus 298 ~~g~~~~~~~~~~~--l~~~~~a~~~~~~~~-~~gkvvi~~ 335 (335)
.++.+.+.....++ ++++++|++.+.+++ ..+|+|++.
T Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 299 EEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 99998877666777 999999999999988 889999874
No 78
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=4.1e-37 Score=282.11 Aligned_cols=315 Identities=40% Similarity=0.644 Sum_probs=271.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++...+.+..+++.+.+.|++.+++|+|++.++++|.+|++.+.|..+....+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 89999987777777899988888899999999999999999999998886654345578899999999999999999999
Q ss_pred CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|++.. ..|++++|+.++.+.++++|+++++++++.++.+..+||+++.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999998762 24789999999999999999999999999999999999999888
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
..++.++++++| +|+.+.+|.+++++++..|++|+++++++++.+.++..+.+.+++..+..+...+.+.
T Consensus 161 ~~~~~~~~~vlI----------~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (342)
T cd08266 161 RARLRPGETVLV----------HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVREL 230 (342)
T ss_pred hcCCCCCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHH
Confidence 889999999999 9988999999999999999999999999999888888888777877776777777777
Q ss_pred hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 293 (335)
Q Consensus 214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (335)
+.++++|++++++|...+...++.++++|+++.+|........++....+.+++++.+...... ..+..+
T Consensus 231 ~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 300 (342)
T cd08266 231 TGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTK----------AELDEA 300 (342)
T ss_pred hCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCH----------HHHHHH
Confidence 7777899999999998888899999999999999876554334555455677888877655321 133447
Q ss_pred HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.+++.++.+++.+.+.|+++++++|++.+.++...+|+++++
T Consensus 301 ~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 301 LRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 788999988888888999999999999999888889999875
No 79
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-37 Score=284.93 Aligned_cols=305 Identities=32% Similarity=0.471 Sum_probs=257.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++++ +++++.+.|.+.++||+||+.++++|++|++...|..+. ..+|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccCC
Confidence 899999988764 899999999999999999999999999999988886643 23477899999999999999998899
Q ss_pred CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|+++. ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++..
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~ 157 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRR 157 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHh
Confidence 999999863 15889999999999999999999999999999999999999866
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
. .+.++++++| +|+.|.+|++++++|+.+|++|+++++++++.+.++++ ++.+++.. .+.+.+.+.
T Consensus 158 ~-~~~~~~~vlI----------~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~ 223 (334)
T PRK13771 158 A-GVKKGETVLV----------TGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI 223 (334)
T ss_pred c-CCCCCCEEEE----------ECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc
Confidence 5 8999999999 99889999999999999999999999999999888877 66666554 455555554
Q ss_pred hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc-ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292 (335)
Q Consensus 214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (335)
+ ++|+++||+|+......+++++++|+++.+|....... .......+.+++++.+..... .+.++.
T Consensus 224 -~--~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 290 (334)
T PRK13771 224 -G--GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISAT----------KRDVEE 290 (334)
T ss_pred -C--CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCC----------HHHHHH
Confidence 2 69999999999888889999999999999997654321 233444456788887763211 123445
Q ss_pred HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 293 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+++++.++.+++.+.+.|+++++++|++.+++++..||+++.+
T Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 291 ALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 8889999999887889999999999999999888889999865
No 80
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5.5e-37 Score=282.29 Aligned_cols=306 Identities=31% Similarity=0.455 Sum_probs=258.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+.+++++. +.+++.+.|++.+++|+||+.++++|+.|+..+.|.++ +...|.++|+|++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~ 76 (343)
T cd08235 1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFK 76 (343)
T ss_pred CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCC
Confidence 89999988763 88999999999999999999999999999999888664 233477899999999999999999999
Q ss_pred CCCEEEEec---------------------------CCcceeeEEEecCCc-----eEeCCCCCChhhhccCcchHHHHH
Q 019790 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQ-----VLPVPSGVSLKDAAAFPEVACTVW 128 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~~~~~~~~a~ 128 (335)
+||+|+++. ..|+|++|+.++.+. ++++|+++++.+++.+ .++.+||
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~ 155 (343)
T cd08235 77 VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCI 155 (343)
T ss_pred CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHH
Confidence 999999862 358999999999998 9999999999999865 7889999
Q ss_pred HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790 129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFV 207 (335)
Q Consensus 129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 207 (335)
+++.. .+++++++||| +| +|.+|.+++++|+..|++ |+++++++++.+.+++++.+.++++++..+.
T Consensus 156 ~~l~~-~~~~~g~~VlV----------~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~ 223 (343)
T cd08235 156 NAQRK-AGIKPGDTVLV----------IG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLV 223 (343)
T ss_pred HHHHh-cCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHH
Confidence 99954 58999999999 96 799999999999999998 9889889999999888999999998888888
Q ss_pred HHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790 208 ARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALI 285 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (335)
+.+.+.+.++++|+++||+++. .+...+++++++|+++.+|..... ...++......+++.+.+......
T Consensus 224 ~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------- 295 (343)
T cd08235 224 EKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASP-------- 295 (343)
T ss_pred HHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCCh--------
Confidence 8888888888899999999965 678889999999999999865432 233445556667777776543321
Q ss_pred HHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 286 VSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 286 ~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+.++.+++++.++.+++ .+...|+++++++|++.+.+++ .+|+|+.
T Consensus 296 --~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 296 --EDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred --hhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 12344788999998863 4567899999999999999988 8999874
No 81
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=6e-37 Score=282.14 Aligned_cols=306 Identities=29% Similarity=0.446 Sum_probs=257.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~-~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..++ .+++++.+.|.|. ++||+|++.++++|+.|++...|.++. ..|.++|+|++|+|+++|++++++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (344)
T cd08284 1 MKAVVFKGPG---DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTL 75 (344)
T ss_pred CeeEEEecCC---CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCcccc
Confidence 8999998654 4899999999885 999999999999999999988886542 346789999999999999999999
Q ss_pred CCCCEEEEec-------------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHH
Q 019790 80 KVGDQVCALL-------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACT 126 (335)
Q Consensus 80 ~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~ 126 (335)
++||+|+++. .+|+|++|+.++.+ .++++|++++++++++++.+++|
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~t 155 (344)
T cd08284 76 KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPT 155 (344)
T ss_pred CCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHH
Confidence 9999999753 14889999999875 99999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790 127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED 205 (335)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 205 (335)
||+++. ...+.++++||| +| +|.+|++++++|+.+|+ +|+++++++++.+.++++|+. .++.+..+
T Consensus 156 a~~~~~-~~~~~~~~~vlI----------~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 222 (344)
T cd08284 156 GYFGAK-RAQVRPGDTVAV----------IG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAE 222 (344)
T ss_pred HHhhhH-hcCCccCCEEEE----------EC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcC
Confidence 999995 478899999999 96 79999999999999997 899998888888888899975 46666677
Q ss_pred HHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHH
Q 019790 206 FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 284 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (335)
+...+.+.+.++++|++|||+++ ..+..++++++++|+++.+|..............+.+++++.+....
T Consensus 223 ~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 293 (344)
T cd08284 223 PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCP--------- 293 (344)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCC---------
Confidence 88888888887889999999996 45788899999999999998765443344555567778887754211
Q ss_pred HHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 285 IVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 285 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
....++.+++++.++.+++ ++.+++++++++++++.+.+++. +|+|++|
T Consensus 294 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~ 344 (344)
T cd08284 294 -VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP 344 (344)
T ss_pred -cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence 1233455888999998875 46788999999999999988877 9999875
No 82
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.5e-37 Score=278.55 Aligned_cols=318 Identities=32% Similarity=0.512 Sum_probs=269.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++.+..+++++.+.|++.+++|+|++.++++|++|+....+........|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 89999999888877899998888899999999999999999999988876554344578899999999999999999999
Q ss_pred CCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155 (335)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~ 155 (335)
+||+|+++. ..|+|++|+.++.+.++++|+++++.+++.++....+||+++.+..++.++++++|
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli---------- 150 (326)
T cd08272 81 VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLI---------- 150 (326)
T ss_pred CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE----------
Confidence 999999885 25889999999999999999999999999999999999999888899999999999
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 235 (335)
+|+.+.+|++++++++.+|++|++++++ ++.+.++++|.+.+++.... +...+.+.+.++++|+++||+++......+
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 228 (326)
T cd08272 151 HGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASF 228 (326)
T ss_pred EcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHH
Confidence 9989999999999999999999999988 88888888999888887766 778888888888899999999998788899
Q ss_pred ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecccc-chhhHHHHHHHHHHHHHHHHHCCccccccc-cccchh
Q 019790 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR-STENKALIVSEVEKNVWPAIAVGKVKPVIY-KYLPLC 313 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~l~ 313 (335)
++++++|+++.+|... +........+++++.+..+... ............++.+.+++.++.+++.+. +.|+++
T Consensus 229 ~~l~~~g~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 304 (326)
T cd08272 229 EAVALYGRVVSILGGA----THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLE 304 (326)
T ss_pred HHhccCCEEEEEecCC----ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHH
Confidence 9999999999998653 2222233467777777664321 000111223445666888999999887755 899999
Q ss_pred hHHHHHHHHHhCCCceeEEEe
Q 019790 314 EAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 314 ~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+++++++.+.+++..+|++++
T Consensus 305 ~~~~~~~~~~~~~~~~~vv~~ 325 (326)
T cd08272 305 EAAAAHARLESGSARGKIVID 325 (326)
T ss_pred HHHHHHHHHHcCCcccEEEEE
Confidence 999999999988888899886
No 83
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=4.6e-37 Score=281.17 Aligned_cols=305 Identities=34% Similarity=0.483 Sum_probs=257.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++. .+.+++.|.|.+.+++|+|++.++++|++|++...|..+. ...|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccCC
Confidence 89999987433 4899999999999999999999999999999998887653 34578999999999999999999999
Q ss_pred CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|+++. ..|+|++|+.++...++++|+++++++++.++.++.+||+++..
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~ 157 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR 157 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence 999999874 15899999999999999999999999999999999999999966
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
.++.+++++|| +|++|.+|++++++++..|++|+++++++++.+.+++++.+.+++..+ +.+.+.+.
T Consensus 158 -~~~~~~~~vlI----------~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 224 (332)
T cd08259 158 -AGVKKGDTVLV----------TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKL 224 (332)
T ss_pred -hCCCCCCEEEE----------ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhc
Confidence 88999999999 999999999999999999999999999999888888888877776544 55555554
Q ss_pred hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 293 (335)
Q Consensus 214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (335)
. ++|++++|+|......++++++++|+++.+|........+.......++.++.+.... . ...++.+
T Consensus 225 ~---~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~ 291 (332)
T cd08259 225 G---GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA--T--------KADVEEA 291 (332)
T ss_pred c---CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC--C--------HHHHHHH
Confidence 3 6999999999988888999999999999998765432223444444567776665311 1 1234448
Q ss_pred HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.+++.+|.+++.+.++|+++++++|++.+.+++..||++++
T Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 292 LKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 88899999988888899999999999999998888999874
No 84
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=7.7e-37 Score=284.19 Aligned_cols=309 Identities=26% Similarity=0.351 Sum_probs=250.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||.++..++++ +++++.|.|++.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|+
T Consensus 8 ~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 8 CKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEEEeCCCCccCC
Confidence 688888876654 89999999999999999999999999999999988753 23588999999999999999999999
Q ss_pred CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (335)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (335)
+||+|+.+. ..|+|++|++++.+.++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999998751 14789999999999999999999
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
++++++++++++.+||+++....++++++++|| +| .|++|++++++|+.+|+ +|+++++++++++.++
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~ 232 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAV----------FG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK 232 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 999999999999999999878889999999999 95 79999999999999999 8999999999999999
Q ss_pred HcCCCEEEeCCCcc--HHHHHHHHhCCCcccEEEeCCCh-hhHHHhhcc-ccCCCEEEEEeccCCC-ccccChhHHhhcc
Q 019790 192 DLGADVCINYKTED--FVARVKEETGGKGVDVILDCMGA-SYFQRNLGS-LNIDGRLFIIGTQGGA-KTELNITSLFAKR 266 (335)
Q Consensus 192 ~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~ 266 (335)
++|++.+++..+.. +...+.+.++ +++|+++||+|+ ..+..++.. ++++|+++.+|..... ..+++.. .+.++
T Consensus 233 ~lGa~~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~ 310 (373)
T cd08299 233 ELGATECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTG 310 (373)
T ss_pred HcCCceEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcC
Confidence 99999988876533 6667777776 479999999996 445665555 4679999999976532 2233332 23467
Q ss_pred eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
.++.+++.......+. +..+++.+.++. +.+.+.+.|+++++++|++.+.+++. .|+++.
T Consensus 311 ~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~ 372 (373)
T cd08299 311 RTWKGAVFGGWKSKDS-------VPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT 372 (373)
T ss_pred CeEEEEEecCCccHHH-------HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence 7888877654432111 111445555554 44567899999999999999987765 477775
No 85
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=9.5e-37 Score=278.42 Aligned_cols=315 Identities=20% Similarity=0.308 Sum_probs=258.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||++++.+|+++.+++++.|.|+++++||+||+.++++|++|+....|..+....+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 99999999888778999999999999999999999999999999988886543334578899999999998 6777899
Q ss_pred CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH--HhcCCC-CCCEEEEeecccc
Q 019790 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLS-PGESFLVDFCSIS 151 (335)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~--~~~~~~-~~~~vli~~~~~~ 151 (335)
+||+|+++. ..|+|++|+.++.+.++++|+++++++++.++..+++++.++. ...... ++++++|
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI------ 152 (324)
T cd08288 79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV------ 152 (324)
T ss_pred CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE------
Confidence 999999863 2589999999999999999999999999999999999987764 123445 6789999
Q ss_pred ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231 (335)
Q Consensus 152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 231 (335)
+|++|.+|++++++|+.+|++|++++.++++.+.++++|++.++++.+... .++..+.+ ++|.++|++++...
T Consensus 153 ----~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~~ 225 (324)
T cd08288 153 ----TGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHTL 225 (324)
T ss_pred ----ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHHH
Confidence 998899999999999999999999999999999999999999888765332 44555443 58999999998667
Q ss_pred HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP 311 (335)
Q Consensus 232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 311 (335)
...+..++.+|+++.+|.........+...++.+++++.+......... ...+.++.+.+++.++.+.+ +.+.++
T Consensus 226 ~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-i~~~~~ 300 (324)
T cd08288 226 ANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIE----RRRAAWARLARDLDPALLEA-LTREIP 300 (324)
T ss_pred HHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccch----hhHHHHHHHHHHHhcCCccc-cceeec
Confidence 7788888999999999876432223444555578899888764432211 12345555778888888876 468999
Q ss_pred hhhHHHHHHHHHhCCCceeEEEeC
Q 019790 312 LCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 312 l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++++++|++.+++++..+|+++++
T Consensus 301 ~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 301 LADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHHHHHHHhcCCccCeEEEeC
Confidence 999999999999999999999864
No 86
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=6e-37 Score=281.12 Aligned_cols=318 Identities=31% Similarity=0.400 Sum_probs=264.2
Q ss_pred CEEEEEcCCCCCc---ceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790 1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (335)
Q Consensus 1 mka~~~~~~~~~~---~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (335)
|||++++.++++. .+++++.+.|++.+++|+||+.++++|++|++...+..+. ...|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 8999999998875 4888888989999999999999999999999988776542 23477899999999999999999
Q ss_pred CCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC-----CCEEEEeecc
Q 019790 78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVDFCS 149 (335)
Q Consensus 78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~-----~~~vli~~~~ 149 (335)
.|++||+|+.+. ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++.+...+.+ +++++|
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV---- 155 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLI---- 155 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEE----
Confidence 999999999864 46899999999999999999999999999999999999999878788887 999999
Q ss_pred ccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 150 ISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 150 ~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+|+.|.+|++++++|+.+| ++|+++++++++.+.++++|++.+++... .+...+... .++++|++|||+|+
T Consensus 156 ------~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~-~~~~~d~vl~~~~~ 227 (336)
T cd08252 156 ------IGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEAL-GIEPVDYIFCLTDT 227 (336)
T ss_pred ------EcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhh-CCCCCCEEEEccCc
Confidence 9989999999999999999 99999999999999999999988888764 566666543 44689999999995
Q ss_pred -hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccch--hhHHHHHHHHHHHHHHHHHCCccccc
Q 019790 229 -SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAIAVGKVKPV 305 (335)
Q Consensus 229 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~ 305 (335)
..+..++++++++|+++.+|... ..++...+..+++++.+..+..... ..........++.+.+++.+|.+++.
T Consensus 228 ~~~~~~~~~~l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (336)
T cd08252 228 DQHWDAMAELIAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT 304 (336)
T ss_pred HHHHHHHHHHhcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence 56788999999999999998642 3445555556788888765542111 11111233456668899999998875
Q ss_pred cc---cccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 306 IY---KYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 306 ~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+. +.++++++++|++.+.++...+|++++
T Consensus 305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 305 LTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 32 457999999999999999988898874
No 87
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=7.7e-37 Score=282.15 Aligned_cols=305 Identities=26% Similarity=0.372 Sum_probs=254.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--------CCCCCCCCCCceEEEEEEe
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--------PKGASPYPGLECSGTILSV 72 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~v 72 (335)
|||+++..++. +++++.+.|++.+++|+||+.++++|++|++.+.|.... ....|.++|+|++|+|+++
T Consensus 1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 99999987654 899999999999999999999999999999988875311 0135778999999999999
Q ss_pred cCCCC--CCCCCCEEEE---------------------------ec--CCcceeeEEEecCC-ceEeCCCCCChhhhccC
Q 019790 73 GKNVS--RWKVGDQVCA---------------------------LL--GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (335)
Q Consensus 73 G~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~ 120 (335)
|++++ .|++||+|++ +. ..|+|++|+.++.+ .++++|+++++++++.+
T Consensus 78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~ 157 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI 157 (350)
T ss_pred CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence 99998 8999999987 31 35899999999988 57899999999999988
Q ss_pred cchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEE
Q 019790 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
.++.++|+++ +..+++++++|+| .| .|.+|.+++++|+++|++ ++++++++++.+.++++|++.++
T Consensus 158 -~~~~ta~~a~-~~~~~~~g~~vlI----------~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~ 224 (350)
T cd08256 158 -EPLACALHAV-DRANIKFDDVVVL----------AG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL 224 (350)
T ss_pred -hHHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence 8999999998 7789999999999 66 699999999999999985 67778888888888899999998
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHH-hhcceEEEEeecccc
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAAGLRSR 277 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 277 (335)
++....+.+.+.+.+++.++|++|||+|+ ..+..++++++++|+++.+|..... ..++...+ ..+++++.++.....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 303 (350)
T cd08256 225 NPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSHLGPY 303 (350)
T ss_pred cCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEeccCch
Confidence 88877888888888888889999999995 4577889999999999999865432 23444333 346677777654321
Q ss_pred chhhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 278 STENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
.++.+++++.+|.+++. +.+.|+++++++|++.+++++..+|+++
T Consensus 304 -----------~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 304 -----------CYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred -----------hHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 23347888999998873 6789999999999999999888888874
No 88
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-36 Score=275.56 Aligned_cols=323 Identities=35% Similarity=0.529 Sum_probs=275.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++...+.+..+++.+.+.|.+.+++|+|++.++++|+.|+....+.......+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 89999998877778899888888899999999999999999999888776544334577899999999999999999999
Q ss_pred CCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155 (335)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~ 155 (335)
+||+|+++. ..|++++|+.++.+.++++|+++++++++.++.+..++|+++.....+.++++++|
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli---------- 150 (328)
T cd08268 81 VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI---------- 150 (328)
T ss_pred CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE----------
Confidence 999999875 34889999999999999999999999999999999999999988888999999999
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 235 (335)
+|+++.+|.+++++++..|++++++++++++.+.++++|.+.+++.....+...+.+.+.+.++|++++|+++.....++
T Consensus 151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~ 230 (328)
T cd08268 151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLA 230 (328)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHH
Confidence 99899999999999999999999999999999888888988888887777777788888777899999999998788889
Q ss_pred ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 019790 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA 315 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~ 315 (335)
++++++|+++.+|........++....+.+++++.+..+.... .........++.+.+++.++.+.+.....|+++++
T Consensus 231 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (328)
T cd08268 231 DALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDI 308 (328)
T ss_pred HhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHH
Confidence 9999999999998665432334444356788888877654322 11123344556677778888888777788999999
Q ss_pred HHHHHHHHhCCCceeEEEeC
Q 019790 316 AEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 316 ~~a~~~~~~~~~~gkvvi~~ 335 (335)
+++++.+.+++..+|++++|
T Consensus 309 ~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 309 VEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHHHHHcCCCCceEEEeC
Confidence 99999999888889999875
No 89
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.2e-36 Score=282.21 Aligned_cols=307 Identities=25% Similarity=0.370 Sum_probs=257.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+++.+.+.+ +++++.+.|.+.+++|+||+.++++|++|++.+.+..+. ..|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCC
Confidence 67888876654 899999999999999999999999999999998886542 34789999999999999999999999
Q ss_pred CCEEEEecC------------------------------------------------CcceeeEEEecCCceEeCCCCCC
Q 019790 82 GDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGVS 113 (335)
Q Consensus 82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~ 113 (335)
||+|++... .|+|++|+.++.+.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 999987521 26899999999999999999999
Q ss_pred hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHH
Q 019790 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKD 192 (335)
Q Consensus 114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~ 192 (335)
+++++.++.++.+||+++....++.+++++|| +| .|++|++++++|+.+|++ |+++++++++.+.+++
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI----------~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~ 226 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAV----------FG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ 226 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999888889999999999 96 799999999999999995 7777779999999999
Q ss_pred cCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhcccc-CCCEEEEEeccC-CCccccChhHHhhcce
Q 019790 193 LGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN-IDGRLFIIGTQG-GAKTELNITSLFAKRL 267 (335)
Q Consensus 193 ~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~ 267 (335)
+|++.+++.... ++.+.+++.++ +++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .++.
T Consensus 227 ~g~~~~v~~~~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 304 (365)
T cd05279 227 LGATECINPRDQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGR 304 (365)
T ss_pred hCCCeecccccccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCC
Confidence 999988887766 67777888775 689999999986 56788899999 999999998754 22345666666 5777
Q ss_pred EEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
++.|.+...+... +.+..+.+++.++.+.+ .+.++|+++++++|++.+++++.. |+++
T Consensus 305 ~l~g~~~~~~~~~-------~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 305 TIKGTVFGGWKSK-------DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred eEEEEeccCCchH-------hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 8887765544321 22344788899998765 468899999999999999877654 6665
No 90
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=6.5e-37 Score=281.21 Aligned_cols=301 Identities=25% Similarity=0.355 Sum_probs=254.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
|+++.+.++ ..+++++.+.|++.++||+||+.++++|++|++.+.|.... ..+|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~ 77 (337)
T cd05283 1 KGYAARDAS--GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKV 77 (337)
T ss_pred CceEEecCC--CCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCC
Confidence 567777666 45999999999999999999999999999999999887643 345889999999999999999999999
Q ss_pred CCEEEEe-----------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790 82 GDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (335)
Q Consensus 82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~ 126 (335)
||+|+.. ...|+|++|+.++.+.++++|+++++++++.+.+.+.+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 157 (337)
T cd05283 78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT 157 (337)
T ss_pred CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence 9999731 23589999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790 127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206 (335)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 206 (335)
||+++.. ..+.++++++| .| .|.+|++++++|+.+|++|+++++++++.+.++++|++.+++....++
T Consensus 158 a~~~~~~-~~~~~g~~vlV----------~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 225 (337)
T cd05283 158 VYSPLKR-NGVGPGKRVGV----------VG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEA 225 (337)
T ss_pred HHHHHHh-cCCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhh
Confidence 9999855 45899999999 87 799999999999999999999999999999999999988887665433
Q ss_pred HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790 207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI 285 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (335)
... . ++++|++|||+|+.. +..++++++++|+++.+|..... ..+++..++.+++++.+......
T Consensus 226 ~~~----~-~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~-------- 291 (337)
T cd05283 226 MKK----A-AGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIGGR-------- 291 (337)
T ss_pred hhh----c-cCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEecccCH--------
Confidence 221 1 357999999999874 78889999999999999876543 25566676778999998766421
Q ss_pred HHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 286 VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 286 ~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+.++.+++++.++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus 292 --~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 --KETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred --HHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 1234477888899988765 789999999999999999999999874
No 91
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2e-36 Score=278.55 Aligned_cols=309 Identities=32% Similarity=0.482 Sum_probs=257.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||++++.++. +.+++.+.|++.++||+||+.++++|++|+....+... ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~a~~~~~~~~---l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~--~~~~~~~g~~~~G~V~~~g~~v~~~~ 75 (343)
T cd08236 1 MKALVLTGPGD---LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA--YHPPLVLGHEFSGTVEEVGSGVDDLA 75 (343)
T ss_pred CeeEEEecCCc---eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC--CCCCcccCcceEEEEEEECCCCCcCC
Confidence 89999998753 88999999999999999999999999999998877652 23477899999999999999999999
Q ss_pred CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|+++. ..|+|++|+.++.+.++++|+++++++++++ ...++||+++.
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~- 153 (343)
T cd08236 76 VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR- 153 (343)
T ss_pred CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-
Confidence 999999862 3589999999999999999999999999877 67889999985
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
...+.++++||| +| .|.+|.+++++|+.+|++ |+++++++++.+.++++|.+.+++++... ...+.+
T Consensus 154 ~~~~~~~~~vlI----------~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~ 221 (343)
T cd08236 154 LAGITLGDTVVV----------IG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRE 221 (343)
T ss_pred hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHH
Confidence 778999999999 96 699999999999999997 99999999999988889998888887766 777888
Q ss_pred HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCc--cccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV 289 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (335)
.++++++|+++||+|+ ..+..++++|+++|+++.+|...... ...+...++.+++++.++........ ..+.
T Consensus 222 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 296 (343)
T cd08236 222 LTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF-----PGDE 296 (343)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc-----chhh
Confidence 8887789999999986 45788899999999999998654321 12234455678888888766432211 1223
Q ss_pred HHHHHHHHHCCccc--cccccccchhhHHHHHHHHHh-CCCceeEEE
Q 019790 290 EKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMES-SQHIGKIML 333 (335)
Q Consensus 290 ~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvi 333 (335)
++.+.+++.++.+. +.+.+.+++++++++++.+.+ ....||+|+
T Consensus 297 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 297 WRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 45578889999875 446788999999999999998 667788874
No 92
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=7.7e-37 Score=261.10 Aligned_cols=303 Identities=23% Similarity=0.269 Sum_probs=252.0
Q ss_pred CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEec--CCCCCCCCCCEEEEec
Q 019790 12 PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG--KNVSRWKVGDQVCALL 89 (335)
Q Consensus 12 ~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG--~~~~~~~~Gd~V~~~~ 89 (335)
++.+++++.+.|.|++||||+|+.|.+++|.-.-.+..... .-.|+-+|...+|.++... ++...|++||.|.+.
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~S--Y~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~- 100 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPS--YAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV- 100 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcc--cCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-
Confidence 36699999999999999999999999999833322222111 1226667766655444322 456789999999998
Q ss_pred CCcceeeEEEecCCceEeCCCCCChh--hhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHH
Q 019790 90 GGGGYAEKVAVPAGQVLPVPSGVSLK--DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAI 167 (335)
Q Consensus 90 ~~g~~~~~~~~~~~~~~~~p~~~~~~--~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~ 167 (335)
.+|++|..++.+.+.++++..-+. .-..+.++..|||.+|.+.+..++|++++| .+++|++|..+.
T Consensus 101 --~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvV----------SaAaGaVGsvvg 168 (340)
T COG2130 101 --SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVV----------SAAAGAVGSVVG 168 (340)
T ss_pred --ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEE----------EecccccchHHH
Confidence 579999999999999997653222 223588999999999999999999999999 999999999999
Q ss_pred HHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEE
Q 019790 168 QMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 168 ~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~ 246 (335)
|+||..|++|+.++.++++.+++.+ +|++.++||++.++.+.+++... +++|+.|||+|++.+...+..|+..+|+++
T Consensus 169 QiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~ 247 (340)
T COG2130 169 QIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLLNLFARIPV 247 (340)
T ss_pred HHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhhccccceee
Confidence 9999999999999999999999987 99999999999999999999887 589999999999999999999999999999
Q ss_pred EeccCCCccc------cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790 247 IGTQGGAKTE------LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ 320 (335)
Q Consensus 247 ~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~ 320 (335)
+|.....+.+ -.+..++.+++++.|+....... ....+..+++..|+++|+++...+.+-+|+++++||.
T Consensus 248 CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~----~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~ 323 (340)
T COG2130 248 CGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD----QRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFI 323 (340)
T ss_pred eeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh----hhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHH
Confidence 9988765322 23556677899999998743322 2234566669999999999988888888999999999
Q ss_pred HHHhCCCceeEEEe
Q 019790 321 LMESSQHIGKIMLV 334 (335)
Q Consensus 321 ~~~~~~~~gkvvi~ 334 (335)
-|.++++.||.|++
T Consensus 324 gLl~G~N~GK~vvK 337 (340)
T COG2130 324 GLLSGKNFGKLVVK 337 (340)
T ss_pred HHhcCCccceEEEE
Confidence 99999999999986
No 93
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.1e-36 Score=281.70 Aligned_cols=305 Identities=26% Similarity=0.423 Sum_probs=252.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
||++++..++ .+++++.+.|.+ +++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.+
T Consensus 1 m~~~~~~~~~---~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~ 75 (375)
T cd08282 1 MKAVVYGGPG---NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESL 75 (375)
T ss_pred CceEEEecCC---ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcC
Confidence 8999997664 499999999986 7999999999999999999999887652 358899999999999999999999
Q ss_pred CCCCEEEE-------ec------------------------------CCcceeeEEEecCC--ceEeCCCCCChh---hh
Q 019790 80 KVGDQVCA-------LL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLK---DA 117 (335)
Q Consensus 80 ~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~a 117 (335)
++||+|+. .| .+|+|++|+.++.+ .++++|++++++ ++
T Consensus 76 ~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~ 155 (375)
T cd08282 76 KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY 155 (375)
T ss_pred CCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence 99999986 22 13889999999976 899999999998 56
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCC
Q 019790 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD 196 (335)
Q Consensus 118 a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~ 196 (335)
+.+..++++||+++ ...++.+|++|+| .| .|.+|++++|+|+.+|+ +|+++++++++.+.++++|+
T Consensus 156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI----------~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~- 222 (375)
T cd08282 156 LMLSDIFPTGWHGL-ELAGVQPGDTVAV----------FG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA- 222 (375)
T ss_pred eeecchHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-
Confidence 77889999999999 7789999999999 87 69999999999999998 79998889999999999998
Q ss_pred EEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh------------HHHhhccccCCCEEEEEeccCCC-----------
Q 019790 197 VCINYKTEDFVARVKEETGGKGVDVILDCMGASY------------FQRNLGSLNIDGRLFIIGTQGGA----------- 253 (335)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~----------- 253 (335)
..+++.+..+.+.+.+.++ +++|+++||+|+.. +..++++++++|+++.+|.....
T Consensus 223 ~~v~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~ 301 (375)
T cd08282 223 IPIDFSDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQ 301 (375)
T ss_pred eEeccCcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccC
Confidence 4567777777778888776 57999999999763 67889999999999888764321
Q ss_pred -ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCcee
Q 019790 254 -KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGK 330 (335)
Q Consensus 254 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gk 330 (335)
...++...++.++..+.+..... ...++.++++++++++++ ++.+.++++++++|++.+.+++ .+|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k 370 (375)
T cd08282 302 GELSFDFGLLWAKGLSFGTGQAPV----------KKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETK 370 (375)
T ss_pred ccccccHHHHHhcCcEEEEecCCc----------hhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceE
Confidence 12244555566666665532211 122344788999999886 3789999999999999999888 889
Q ss_pred EEEeC
Q 019790 331 IMLVP 335 (335)
Q Consensus 331 vvi~~ 335 (335)
+|+++
T Consensus 371 vvv~~ 375 (375)
T cd08282 371 VVIKP 375 (375)
T ss_pred EEeCC
Confidence 99875
No 94
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.2e-36 Score=277.04 Aligned_cols=306 Identities=28% Similarity=0.384 Sum_probs=247.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC----------CCCCCCCCCCCceEEEEE
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------PPKGASPYPGLECSGTIL 70 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V~ 70 (335)
|||+++..+ .+++++.+.|++.++||+||+.++++|+.|++...|... ....+|.++|+|++|+|+
T Consensus 1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 899999865 399999999999999999999999999999998887321 122347889999999999
Q ss_pred EecCCCCC-CCCCCEEEEec-----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 71 SVGKNVSR-WKVGDQVCALL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 71 ~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
++|++++. |++||+|+++. ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~- 154 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV- 154 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-
Confidence 99999987 99999999872 35899999999999999999999999887 778888999985
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHH---
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA--- 208 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--- 208 (335)
...+++++++||| +| .|.+|.+++|+|+.+|++ ++++.+++++.+.++++|++.+++++.....+
T Consensus 155 ~~~~~~~g~~VlI----------~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 223 (341)
T cd08262 155 RRARLTPGEVALV----------IG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA 223 (341)
T ss_pred HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence 7889999999999 96 699999999999999996 66666788888988999998888876543221
Q ss_pred HHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790 209 RVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS 287 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (335)
.+...+.++++|++|||+|+. .+..++++++++|+++.+|..... ..+.......+++++.+..... .
T Consensus 224 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-------- 292 (341)
T cd08262 224 AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES-DNIEPALAIRKELTLQFSLGYT--P-------- 292 (341)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC-CccCHHHHhhcceEEEEEeccc--H--------
Confidence 344556667899999999984 677889999999999999876432 1233333345667766543221 1
Q ss_pred HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 288 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 288 ~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
+.++.+.+++.+|.+.+ .+.+.++++++++|++.+++++..+|+|++
T Consensus 293 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 293 EEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 12334788899998875 347899999999999999999989999874
No 95
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=6e-36 Score=275.23 Aligned_cols=308 Identities=27% Similarity=0.346 Sum_probs=250.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
||++++..++ +.+++.+.|.|+|.++||+||+.++++|++|++++.+... ....+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKLKAE--PGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEecCC--CceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 8999998876 4499999999999999999999999999999997765321 12235778999999999999999999
Q ss_pred CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (335)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l 131 (335)
|++||+|++.. .+|+|++|+.++.+.++++|+++++++++. ..++.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~ 157 (341)
T PRK05396 79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTA 157 (341)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHH
Confidence 99999998751 358999999999999999999999988874 45666666655
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (335)
.. ...+|++++| ++ .|.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++++...+.+.+
T Consensus 158 ~~--~~~~g~~vlV----------~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 224 (341)
T PRK05396 158 LS--FDLVGEDVLI----------TG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVM 224 (341)
T ss_pred Hc--CCCCCCeEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHH
Confidence 33 3468999999 87 69999999999999999 68888888889999999999999988887888888
Q ss_pred HHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790 211 KEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV 289 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (335)
.+.+.++++|++|||.|+. .+..++++|+++|+++.+|..... .+++...+..+++++.++..... . ..
T Consensus 225 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~-~--------~~ 294 (341)
T PRK05396 225 AELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIYGREM-F--------ET 294 (341)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-CcccHHHHhhcceEEEEEEccCc-c--------ch
Confidence 8888888999999999864 468889999999999999875532 33445666777888877642211 1 11
Q ss_pred HHHHHHHHHCC-ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 290 EKNVWPAIAVG-KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 290 ~~~~~~~~~~g-~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+..+.+++.++ ++.+.+.+.++++++++|++.+.+++ .||+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 295 WYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred HHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence 22366788888 45566778999999999999998877 79999864
No 96
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.1e-36 Score=272.66 Aligned_cols=314 Identities=31% Similarity=0.508 Sum_probs=256.1
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+++...+.+..+++++.+.|.|.++||+|++.++++|++|+..+.|..+....+|.++|+|++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78999999888889999999999999999999999999999999888876543346889999999999999999999999
Q ss_pred CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG 161 (335)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~ 161 (335)
||+|+++...|+|++|+.++.+.++++|+++++++++.++.++.+||+++....++.++++++| +|+.|.
T Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI----------~g~~g~ 151 (331)
T cd08273 82 GDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLI----------HGASGG 151 (331)
T ss_pred CCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE----------ECCCcH
Confidence 9999998766899999999999999999999999999999999999999988889999999999 998899
Q ss_pred HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCC
Q 019790 162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 241 (335)
Q Consensus 162 ~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~ 241 (335)
+|++++++|+.+|++|++++. +++.+.++++|+.. ++....++... .. .++++|++++|+++.....++++++++
T Consensus 152 ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~-~~~~~d~vl~~~~~~~~~~~~~~l~~~ 226 (331)
T cd08273 152 VGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--ML-TPGGVDVVFDGVGGESYEESYAALAPG 226 (331)
T ss_pred HHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hc-cCCCceEEEECCchHHHHHHHHHhcCC
Confidence 999999999999999999997 88888888888654 45554444433 22 335799999999998888899999999
Q ss_pred CEEEEEeccCCCcc-ccCh--h----------HH--hhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccccc
Q 019790 242 GRLFIIGTQGGAKT-ELNI--T----------SL--FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI 306 (335)
Q Consensus 242 G~~v~~g~~~~~~~-~~~~--~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 306 (335)
|+++.+|....... .+.. . .. ..++++......... ..+....+.++.+++++.+|.+.+.+
T Consensus 227 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~l~~~~ 303 (331)
T cd08273 227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRA---EDPKLFRQDLTELLDLLAKGKIRPKI 303 (331)
T ss_pred CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcc---cCHHHHHHHHHHHHHHHHCCCccCCc
Confidence 99999987654321 1111 0 01 122333333222111 11122344566688999999998877
Q ss_pred ccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 307 YKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 307 ~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
.+.+++++++++++.+.+++..||+|+
T Consensus 304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 304 AKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 888999999999999998888889876
No 97
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=8.3e-36 Score=271.77 Aligned_cols=288 Identities=24% Similarity=0.351 Sum_probs=239.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ .+++++.+.|++.++||+||+.++++|++|+....|..+ .|.++|+|++|+|+++|++ ++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~ 70 (319)
T cd08242 1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---EL 70 (319)
T ss_pred CeeEEEeCCC---cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CC
Confidence 8999998754 499999999999999999999999999999999888664 3778999999999999987 67
Q ss_pred CCCEEEE---------------------------e-cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCA---------------------------L-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|.+ + ..+|+|++|+.++.+.++++|++++.++++.+ .+..++|.++
T Consensus 71 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~- 148 (319)
T cd08242 71 VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL- 148 (319)
T ss_pred CCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 9999963 1 12589999999999999999999999888754 4555666655
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
+..++.+++++|| +| +|.+|.+++|+|+.+|++|++++.++++.+.++++|++.++++...
T Consensus 149 ~~~~~~~g~~vlV----------~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------- 209 (319)
T cd08242 149 EQVPITPGDKVAV----------LG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE-------- 209 (319)
T ss_pred HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc--------
Confidence 7788999999999 96 7999999999999999999999999999999999999887765321
Q ss_pred HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 291 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (335)
+.+.++|+++||+|+ ..+..++++++++|+++..+.... ...++...+..++.++.+..... ++
T Consensus 210 -~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-------------~~ 274 (319)
T cd08242 210 -SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSRCGP-------------FA 274 (319)
T ss_pred -ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-CCccCHHHheecceEEEEEeccc-------------HH
Confidence 355689999999987 457888999999999998765432 34556666677888888765432 22
Q ss_pred HHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 292 NVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 292 ~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.+.+++.++.+ .+.+.+.|+++++++||+.++++. .+|+|++|
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 37788899988 456789999999999999998765 58999986
No 98
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-35 Score=267.77 Aligned_cols=319 Identities=33% Similarity=0.541 Sum_probs=262.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..+++.+++++++.+.|++.+++|+||+.++++|++|+....+..... ..|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~ 79 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWK 79 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCC
Confidence 999999988743469999999999999999999999999999998877754321 2367899999999999999999999
Q ss_pred CCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157 (335)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g 157 (335)
+||+|+++. ..|+|++|+.++.+.++++|++++..+++.+.+++.+|++++.....+.++++++| +|
T Consensus 80 ~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI----------~g 149 (325)
T cd08271 80 VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILI----------TG 149 (325)
T ss_pred CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEE----------EC
Confidence 999999885 35899999999999999999999999999999999999999988889999999999 99
Q ss_pred ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcc
Q 019790 158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237 (335)
Q Consensus 158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~ 237 (335)
+.+.+|++++++++..|++|+++. ++++.+.+.++|.+.+++.....+...+++.+.++++|++++|+++......+++
T Consensus 150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 228 (325)
T cd08271 150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPT 228 (325)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHh
Confidence 889999999999999999999887 6777788888999888887777777888888887889999999998777778999
Q ss_pred ccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecccc---chhhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR---STENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 314 (335)
Q Consensus 238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~ 314 (335)
++++|+++.++...... .. ..+.+++.+....+... ...+......+.+..+++++.++.+.+...+.|++++
T Consensus 229 l~~~G~~v~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 304 (325)
T cd08271 229 LAFNGHLVCIQGRPDAS---PD-PPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQ 304 (325)
T ss_pred hccCCEEEEEcCCCCCc---ch-hHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHH
Confidence 99999999987543221 11 11223333333322211 1100112344556668889999998877778899999
Q ss_pred HHHHHHHHHhCCCceeEEEeC
Q 019790 315 AAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 315 ~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+.++++.+.++...+|+++++
T Consensus 305 ~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 305 LPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHHHHcCCccceEEEEC
Confidence 999999999888889999864
No 99
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=4.3e-35 Score=266.27 Aligned_cols=322 Identities=38% Similarity=0.616 Sum_probs=271.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~-~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
|||+++..++.+..+++.+.+ |.+. +++++|++.++++|++|+..+.|........|.++|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 899999977776778888887 6666 49999999999999999998877654333346689999999999999999999
Q ss_pred CCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS 159 (335)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~ 159 (335)
++||+|+++...|++++|+.++.+.++++|++++..+++.+..+..+|++++.....+.++++++| +|++
T Consensus 80 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli----------~g~~ 149 (323)
T cd08241 80 KVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLV----------LGAA 149 (323)
T ss_pred CCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEE----------EcCC
Confidence 999999998746899999999999999999999999999899999999999977888999999999 9988
Q ss_pred chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790 160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239 (335)
Q Consensus 160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~ 239 (335)
+.+|++++++|+..|++|+++++++++.+.++++|.+.+++....++.+.+.+.+.++++|.+++|+|+.....++++++
T Consensus 150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~ 229 (323)
T cd08241 150 GGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLA 229 (323)
T ss_pred chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhc
Confidence 99999999999999999999999999999998899888888777778888888888788999999999977888999999
Q ss_pred CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHH
Q 019790 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH 319 (335)
Q Consensus 240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~ 319 (335)
++|+++.+|........+.....+.+++++.+..+...... ........++.+++++.++.+.+...+.|+++++++++
T Consensus 230 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (323)
T cd08241 230 WGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARR-EPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEAL 308 (323)
T ss_pred cCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccch-hHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHH
Confidence 99999999865433222334345667888888765543221 12233455666889999999888788899999999999
Q ss_pred HHHHhCCCceeEEEe
Q 019790 320 QLMESSQHIGKIMLV 334 (335)
Q Consensus 320 ~~~~~~~~~gkvvi~ 334 (335)
+.+.++...+|++++
T Consensus 309 ~~~~~~~~~~~vvv~ 323 (323)
T cd08241 309 RALADRKATGKVVLT 323 (323)
T ss_pred HHHHhCCCCCcEEeC
Confidence 999988888888863
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-35 Score=272.32 Aligned_cols=306 Identities=29% Similarity=0.475 Sum_probs=251.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (335)
||+++++.+++ +++++.+.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++..+
T Consensus 1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (345)
T cd08287 1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSV 75 (345)
T ss_pred CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCcc
Confidence 89999987653 89999999986 8999999999999999999988886643 347899999999999999999999
Q ss_pred CCCCEEEE-ec--------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhc-----cCcchHH
Q 019790 80 KVGDQVCA-LL--------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAA-----AFPEVAC 125 (335)
Q Consensus 80 ~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~~~~~~~ 125 (335)
++||+|++ +. .+|+|++|+.++.+ .++++|++++++.+. ++...++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 99999986 21 13889999999975 899999999882221 2336788
Q ss_pred HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790 126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTE 204 (335)
Q Consensus 126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~ 204 (335)
+||+++ ...++.++++++| .| .|.+|++++++|+.+|++ ++++.+++++.+.++++|++.++++...
T Consensus 156 ~a~~~~-~~~~~~~g~~vlI----------~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~ 223 (345)
T cd08287 156 TGHHAA-VSAGVRPGSTVVV----------VG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGE 223 (345)
T ss_pred HHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcc
Confidence 999988 4678999999999 87 799999999999999995 7888878888888889999999999888
Q ss_pred cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 205 DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
.+.+.+.+.+.+.++|+++||+|+ ..+..++++++++|+++.+|.... ...++....+.+++++.+.....
T Consensus 224 ~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~------- 295 (345)
T cd08287 224 EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAPV------- 295 (345)
T ss_pred cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecCCc-------
Confidence 888888888888889999999986 457889999999999999886553 23455545577888887632211
Q ss_pred HHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
...++.+++++.++.+++ ++.+.++++++++|++.+.+.+. .|++|+|
T Consensus 296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~~ 345 (345)
T cd08287 296 ---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLRP 345 (345)
T ss_pred ---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeCC
Confidence 123445888999999876 35788999999999999887665 4999876
No 101
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-35 Score=271.20 Aligned_cols=301 Identities=31% Similarity=0.451 Sum_probs=251.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|||+++..++ .+++.+.+.|++.++||+||+.++++|+.|+....|..+.. +|.++|+|++|+|+.+|+++++|+
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--~p~~~g~~~~G~v~~vG~~v~~~~ 75 (334)
T cd08234 1 MKALVYEGPG---ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--PPLVPGHEFAGVVVAVGSKVTGFK 75 (334)
T ss_pred CeeEEecCCC---ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC--CCcccccceEEEEEEeCCCCCCCC
Confidence 8999998776 38999999999999999999999999999999988876543 578999999999999999999999
Q ss_pred CCCEEEEe---------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|++. ...|+|++|+.++.+.++++|+++++.+++.+ .++.++++++ .
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~ 153 (334)
T cd08234 76 VGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-D 153 (334)
T ss_pred CCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 99999861 13588999999999999999999999998765 7788999998 7
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 212 (335)
..++++++++|| +| .|.+|.+++++|+.+|++ |+++++++++.+.+++++.+.++++....+... +
T Consensus 154 ~~~~~~g~~vlI----------~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~ 220 (334)
T cd08234 154 LLGIKPGDSVLV----------FG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--K 220 (334)
T ss_pred hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH--H
Confidence 789999999999 96 699999999999999997 888999999999998899888888776665554 4
Q ss_pred HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHH
Q 019790 213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE 290 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (335)
.+.++++|++|||+|+ ......+++|+++|+++.+|..... ..+++...++.+++++.+..... ..+
T Consensus 221 ~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 289 (334)
T cd08234 221 EDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINP-----------YTF 289 (334)
T ss_pred HhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCH-----------HHH
Confidence 5566789999999985 4567889999999999999865532 23444444555778887764321 124
Q ss_pred HHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 291 KNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 291 ~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
+.+++++.++++++ .+.++++++++++|++.+.+ +..+|+|+
T Consensus 290 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 290 PRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 44888899998864 35788999999999999998 77889886
No 102
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.8e-35 Score=272.25 Aligned_cols=302 Identities=27% Similarity=0.408 Sum_probs=247.8
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC-CC-CCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PP-PKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
+++..++ .+++++.+.|.+.++||+||+.++++|+.|++.+.+.. .. ....|.++|+|++|+|+++|+++++|++
T Consensus 2 ~~~~~~~---~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 78 (343)
T cd05285 2 AVLHGPG---DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV 78 (343)
T ss_pred ceEecCC---ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC
Confidence 4455543 48999999999999999999999999999998764321 11 1124678999999999999999999999
Q ss_pred CCEEEE------------------------ec----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 82 GDQVCA------------------------LL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 82 Gd~V~~------------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
||+|++ +. ..|+|++|+.++++.++++|+++++++++.+ .++.+||+++ .
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 79 GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 999986 21 2589999999999999999999999999866 6788999987 7
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccH---HHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF---VAR 209 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~ 209 (335)
..++++++++|| +| .|.+|++++++|+.+|++ |+++++++++.+.++++|++.+++++...+ .+.
T Consensus 157 ~~~~~~g~~vlI----------~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~ 225 (343)
T cd05285 157 RAGVRPGDTVLV----------FG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEK 225 (343)
T ss_pred hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHH
Confidence 889999999999 87 689999999999999997 899988999999999999999998877664 777
Q ss_pred HHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790 210 VKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSE 288 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (335)
+.+.++++++|++|||+|+. .+...+++++++|+++.+|..... ..+++.....+++++.+..... +
T Consensus 226 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~ 293 (343)
T cd05285 226 IAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRYA-----------N 293 (343)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccCh-----------H
Confidence 88888888899999999986 678889999999999999865432 3445555666777777654322 2
Q ss_pred HHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCC-CceeEEE
Q 019790 289 VEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQ-HIGKIML 333 (335)
Q Consensus 289 ~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi 333 (335)
.++.+++++.++.+. +.+.++|+++++.+|++.+.+++ ..+|++|
T Consensus 294 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 294 TYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 234478889999865 44678899999999999998875 4589987
No 103
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1e-35 Score=271.84 Aligned_cols=297 Identities=31% Similarity=0.482 Sum_probs=243.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||++++..++ ++.+++++.+.|+++++||+||+.++++|++|++...+.. . ..+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK-V-KPMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC-C-CCCCeecccceeEEEEEECCCCCCCC
Confidence 8999998776 5668999998888999999999999999999998876422 1 22477899999999999999999999
Q ss_pred CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
+||+|+.+. ..|+|++|+.++.+.++++|+++++++++.++.++.+||+++..
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~ 157 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT 157 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence 999998651 35899999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
.+++++++++| +|++|++|++++++|+++|++|+++++ .+.++++|++.+++..+ ..+.+++.
T Consensus 158 -~~~~~g~~vlI----------~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~~~~l~~~ 220 (325)
T cd08264 158 -AGLGPGETVVV----------FGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--VEEKVKEI 220 (325)
T ss_pred -cCCCCCCEEEE----------ECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--HHHHHHHH
Confidence 88999999999 998899999999999999999988873 25667789888887643 24556666
Q ss_pred hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 293 (335)
Q Consensus 214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (335)
+ +++|++++|+|+..+..++++|+++|+++.+|........++...+..++.++.++..... +.++.+
T Consensus 221 ~--~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 288 (325)
T cd08264 221 T--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTR----------KELLEL 288 (325)
T ss_pred h--CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCH----------HHHHHH
Confidence 6 5799999999998888999999999999999875333345666677777778877644321 122336
Q ss_pred HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeE
Q 019790 294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331 (335)
Q Consensus 294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 331 (335)
++++... +..+.+.|+++++++|++.+.+++..+|+
T Consensus 289 ~~l~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 289 VKIAKDL--KVKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHcC--CceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 6666433 34566889999999999999888777775
No 104
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=4.1e-35 Score=268.17 Aligned_cols=311 Identities=25% Similarity=0.307 Sum_probs=255.4
Q ss_pred EEEEEcCCC----CCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCC
Q 019790 2 KAIVITQPG----SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKN 75 (335)
Q Consensus 2 ka~~~~~~~----~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~ 75 (335)
|||+++..+ .++.+++++.+.|++.+++|+||+.++++|+.|.....+.... +...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 577776554 5688999999999999999999999999999887655543211 1122467899999999999964
Q ss_pred CCCCCCCCEEEEecCCcceeeEEEecC-CceEeCCCCCC--hhhhcc-CcchHHHHHHHHHHhcCCCCCCEEEEeecccc
Q 019790 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVS--LKDAAA-FPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151 (335)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~ 151 (335)
+|++||+|+++ ++|++|+.++. +.++++|++++ ..++++ +++++.+||+++.....+.+++++||
T Consensus 83 --~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI------ 151 (329)
T cd05288 83 --DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV------ 151 (329)
T ss_pred --CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE------
Confidence 79999999987 58999999999 99999999985 445555 89999999999988788999999999
Q ss_pred ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
+|+++.+|++++++|+..|++|+++++++++.+.+++ +|++.++++.+.++.+.+.+.++ +++|++|||+|+..
T Consensus 152 ----~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~ 226 (329)
T cd05288 152 ----SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEI 226 (329)
T ss_pred ----ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHH
Confidence 9989999999999999999999999999999999987 99988888887777777777775 68999999999988
Q ss_pred HHHhhccccCCCEEEEEeccCCCcc-----ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc
Q 019790 231 FQRNLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV 305 (335)
Q Consensus 231 ~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 305 (335)
+..++++++++|+++.+|....... .++....+.+++++.+..+.... ....+.+..+++++.+|.+++.
T Consensus 227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~i~~~ 301 (329)
T cd05288 227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA-----DRFPEALAELAKWLAEGKLKYR 301 (329)
T ss_pred HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH-----HHHHHHHHHHHHHHHCCCcccc
Confidence 8899999999999999986654321 12345556788888876654321 1234456668899999998876
Q ss_pred cccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 306 IYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 306 ~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
....+++++++++++.+.+++..||+++
T Consensus 302 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 302 EDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred ccccccHHHHHHHHHHHhcCCCccceeC
Confidence 6677999999999999998888888874
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=7.5e-36 Score=275.42 Aligned_cols=316 Identities=32% Similarity=0.443 Sum_probs=247.9
Q ss_pred CEEEEEcCCCCCc-ceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCC--------------CCCCCCCCCCCc
Q 019790 1 MKAIVITQPGSPE-VLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYP--------------PPKGASPYPGLE 64 (335)
Q Consensus 1 mka~~~~~~~~~~-~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e 64 (335)
|||+++..+++++ .+++++.+.|.| .++||+||+.++++|++|++...|... .....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 8999999888753 488899999999 599999999999999999998877421 023458899999
Q ss_pred eEEEEEEecCCCCCCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC--
Q 019790 65 CSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-- 139 (335)
Q Consensus 65 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~-- 139 (335)
++|+|+.+|+++++|++||+|+++. ..|+|++|+.++.+.++++|+++++++++.++.++++||+++.....+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 9999999999999999999999875 35899999999999999999999999999999999999999877777654
Q ss_pred --CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 140 --GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 140 --~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
|++++| +|++|++|++++++|+.+|++|+++.++ ++.+.++++|.+.+++.....+...+.. .+
T Consensus 161 ~~g~~vlI----------~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~---~~ 226 (350)
T cd08248 161 AAGKRVLI----------LGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE---RG 226 (350)
T ss_pred CCCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh---cC
Confidence 999999 9989999999999999999999988855 5777778899888888776555555443 35
Q ss_pred cccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc---ccChh----HHhhcceEEEEeeccc---c-chhhHHHHH
Q 019790 218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNIT----SLFAKRLTVQAAGLRS---R-STENKALIV 286 (335)
Q Consensus 218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 286 (335)
++|++|||+|+.....++++++++|+++.+|....... .+... .+......+....... + .... .
T Consensus 227 ~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 302 (350)
T cd08248 227 KFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSP----S 302 (350)
T ss_pred CCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECC----C
Confidence 79999999999888889999999999999985432111 01000 0000000000000000 0 0000 1
Q ss_pred HHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 287 SEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 287 ~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
...++.+++++.+|.+.+.+.+.|++++++++++.+.+++..+|++++
T Consensus 303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 303 GSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 233555889999999888788999999999999999988888888864
No 106
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=8.1e-35 Score=267.75 Aligned_cols=307 Identities=35% Similarity=0.448 Sum_probs=248.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC--CCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||++++.++. .+++.+.+.|.+.++|++||+.++++|++|++.+.+.. ......|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 89999998774 48999999999999999999999999999998765432 111224678999999999999999999
Q ss_pred CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (335)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l 131 (335)
|++||+|+++. ..|+|++|+.++.+.++++|++++++.+ ++..++.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~ 157 (341)
T cd05281 79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV 157 (341)
T ss_pred CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence 99999998851 2588999999999999999999998554 5778888888877
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (335)
. ....+++++|| +| .|.+|++++++|+.+|+ +|+++.+++++.+.++++|.+.+++....++. .+
T Consensus 158 ~--~~~~~g~~vlV----------~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~ 223 (341)
T cd05281 158 L--AGDVSGKSVLI----------TG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EV 223 (341)
T ss_pred H--hcCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HH
Confidence 4 45578999999 87 59999999999999999 79888888888888889999888887777777 88
Q ss_pred HHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChh-HHhhcceEEEEeeccccchhhHHHHHHH
Q 019790 211 KEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSE 288 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (335)
.+.++++++|++|||+|+. .....+++|+++|+++.+|..... ..++.. .+..++..+.+...... .+
T Consensus 224 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 293 (341)
T cd05281 224 KSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-VDIDLNNLVIFKGLTVQGITGRKM---------FE 293 (341)
T ss_pred HHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-cccccchhhhccceEEEEEecCCc---------ch
Confidence 8888888999999999874 467889999999999999865432 222222 24556777766542211 11
Q ss_pred HHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 289 VEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 289 ~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
.+..+.+++.++.+. +.+.+.++++++++|++.+.+++ .||+|++|
T Consensus 294 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 294 TWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred hHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 233478889999876 45678899999999999999988 89999987
No 107
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1e-34 Score=263.41 Aligned_cols=300 Identities=24% Similarity=0.321 Sum_probs=247.4
Q ss_pred cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhh-cCCCCCC-CCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecC
Q 019790 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPPP-KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (335)
Q Consensus 13 ~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (335)
+.+++++.+.|++.++||+||+.++++|++|++.+ .|..+.. ...|.++|+|++|+|+++|++++.+++||+|+++.
T Consensus 5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 45999999999999999999999999999999887 6654221 22477899999999999999999999999999885
Q ss_pred CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHH
Q 019790 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG 170 (335)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a 170 (335)
.|+|++|+.++.+.++++|+++ ..++....+++++++++. ..+++++++++| +| .|.+|.+++++|
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI----------~g-~g~vg~~~~~la 149 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAV----------IG-AGFIGLLFLQLA 149 (312)
T ss_pred CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEE----------EC-CCHHHHHHHHHH
Confidence 4889999999999999999988 233322378889999885 788999999999 96 799999999999
Q ss_pred hhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEe
Q 019790 171 KCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 171 ~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g 248 (335)
+.+|++ |+++++++++.+.++++|++.++++....+...+.+.+.+.++|+++||+|+. ....++++|+++|+++.+|
T Consensus 150 ~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g 229 (312)
T cd08269 150 AAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFG 229 (312)
T ss_pred HHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEc
Confidence 999998 99999998899988899998888877778888888888888999999999864 5788899999999999998
Q ss_pred ccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC
Q 019790 249 TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ 326 (335)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~ 326 (335)
........+++..+..+++++.+....... ...+.++.+++++.++.+++ ++.+.|+++++++|++.+.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 303 (312)
T cd08269 230 YHQDGPRPVPFQTWNWKGIDLINAVERDPR------IGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRP 303 (312)
T ss_pred cCCCCCcccCHHHHhhcCCEEEEecccCcc------chhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCC
Confidence 665333445555666777777765433221 11345566889999999886 3578899999999999998886
Q ss_pred C-ceeEEE
Q 019790 327 H-IGKIML 333 (335)
Q Consensus 327 ~-~gkvvi 333 (335)
. -+|+++
T Consensus 304 ~~~~~~~~ 311 (312)
T cd08269 304 DGFIKGVI 311 (312)
T ss_pred CCceEEEe
Confidence 4 478876
No 108
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=9.1e-35 Score=271.47 Aligned_cols=296 Identities=28% Similarity=0.381 Sum_probs=242.4
Q ss_pred eEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC------CCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEE-
Q 019790 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY------PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA- 87 (335)
Q Consensus 15 l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~- 87 (335)
+++++.+.|++.++||+||+.++++|++|++.+.+.. +....+|.++|||++|+|+++|++++.|++||+|++
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 9999999999999999999999999999998876321 222345789999999999999999999999999985
Q ss_pred --------------------------ecCCcceeeEEEecCCceEeCCCCC-------ChhhhccCcchHHHHHHHHHHh
Q 019790 88 --------------------------LLGGGGYAEKVAVPAGQVLPVPSGV-------SLKDAAAFPEVACTVWSTVFMT 134 (335)
Q Consensus 88 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~~-------~~~~aa~~~~~~~~a~~~l~~~ 134 (335)
+..+|+|++|+.++.+.++++|+++ +.+ +++++.++++||+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 3336899999999999999999863 445 556888999999998666
Q ss_pred -cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCc---cHHHH
Q 019790 135 -SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVAR 209 (335)
Q Consensus 135 -~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~ 209 (335)
.++++|++||| +| .|.+|++++++|+.+|+ +|+++++++++.+.++++|++.++++... ++...
T Consensus 198 ~~~~~~g~~VlV----------~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 266 (384)
T cd08265 198 GGGFRPGAYVVV----------YG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEK 266 (384)
T ss_pred cCCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHH
Confidence 68999999999 95 79999999999999999 79999988888888899999998887643 67788
Q ss_pred HHHHhCCCcccEEEeCCChh--hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790 210 VKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS 287 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (335)
+.+.+.++++|+++||+|+. .+..++++|+++|+++.+|.... ...++...+..+..++.+...... .
T Consensus 267 v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~---------~ 336 (384)
T cd08265 267 VMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHSG---------H 336 (384)
T ss_pred HHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccCC---------c
Confidence 88889888999999999963 56788999999999999986543 234444555666777777643211 1
Q ss_pred HHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 288 EVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 288 ~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
..++.+++++.++.+++. +.+.|+++++++|++.+.+. ..+|+|+
T Consensus 337 ~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 337 GIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred chHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 123448889999998763 57889999999999997665 5688875
No 109
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=9e-35 Score=262.15 Aligned_cols=299 Identities=29% Similarity=0.484 Sum_probs=250.5
Q ss_pred CCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEec--CCcceeeEEE
Q 019790 22 DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL--GGGGYAEKVA 99 (335)
Q Consensus 22 ~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--~~g~~~~~~~ 99 (335)
.|++.+++|+||+.++++|+.|+..+.+.++....+|.++|+|++|+|+++|+++++|++||+|+++. ..|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 46788999999999999999999998887655445688999999999999999999999999999885 3489999999
Q ss_pred ecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEE
Q 019790 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179 (335)
Q Consensus 100 ~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~ 179 (335)
++.+.++++|+++++++++.++.++++||+++ +...+.++++++| +++++.+|.+++++++++|++|++
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli----------~~~~~~~g~~~~~~a~~~g~~v~~ 150 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILI----------QTATGGTGLMAVQLARLKGAEIYA 150 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEE----------ecCCcHHHHHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999999998 5789999999999 999999999999999999999999
Q ss_pred EecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCC-ccccC
Q 019790 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELN 258 (335)
Q Consensus 180 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~ 258 (335)
+++++++.+.++++|.+.+++....++...+.+.+.++++|+++||+++......+++++++|+++.+|..... ...++
T Consensus 151 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 230 (303)
T cd08251 151 TASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVD 230 (303)
T ss_pred EcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccC
Confidence 99999999999999999999888878888888888888999999999988888899999999999999865422 12233
Q ss_pred hhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 259 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
... +.+++.+....+..... .......+.+..+.+++.+|.+++...+.|++++++++++.+.+++..+|+++
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 231 LSV-LSNNQSFHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred hhH-hhcCceEEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 332 33344444333322111 11122345566688999999988878899999999999999999888888874
No 110
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.5e-34 Score=261.66 Aligned_cols=320 Identities=35% Similarity=0.554 Sum_probs=263.6
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+++...+.+..+.+.+.+.|.+.+++|+||+.++++|++|+....|..+.....|.++|||++|+|+.+|+++.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 57777777766678888888888999999999999999999999888765444445778999999999999999999999
Q ss_pred CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG 161 (335)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~ 161 (335)
||+|+++...|+|++|+.++.+.++++|+++++.+++.++.+.+++|+++.+...+.++++++| +|++|.
T Consensus 81 G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli----------~g~~g~ 150 (337)
T cd08275 81 GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLV----------HSAAGG 150 (337)
T ss_pred CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEE----------EcCcch
Confidence 9999999767899999999999999999999999999999999999999988889999999999 998899
Q ss_pred HHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790 162 IGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240 (335)
Q Consensus 162 ~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 240 (335)
+|++++++|+.+ +..++... .+++.+.++.+|.+.+++.....+...+++.++ +++|+++||+|+......++++++
T Consensus 151 ~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~l~~ 228 (337)
T cd08275 151 VGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDLLKP 228 (337)
T ss_pred HHHHHHHHHHHccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHhhcc
Confidence 999999999999 43333332 355777788899888888887788888888775 689999999999888889999999
Q ss_pred CCEEEEEeccCCCc-c---------------ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc
Q 019790 241 DGRLFIIGTQGGAK-T---------------ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP 304 (335)
Q Consensus 241 ~G~~v~~g~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 304 (335)
+|+++.+|...... . ......++.+++++.+..+..... ... .....++.+.+++.++.+++
T Consensus 229 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 306 (337)
T cd08275 229 MGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKP 306 (337)
T ss_pred CcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCC
Confidence 99999998665321 1 111234567788888876542211 111 22334566888899999888
Q ss_pred ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 305 VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 305 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
...+.|++++++++++.+.+++..+|++++|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 307 KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 7778999999999999999988889999876
No 111
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-34 Score=265.53 Aligned_cols=298 Identities=27% Similarity=0.361 Sum_probs=244.9
Q ss_pred CEEEEEcCCCCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||+++..++.+ ..+++++.+.|.+.++||+||+.++++|++|++...|..+. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 899999988852 45888888888899999999999999999999998887654 345889999999999999999999
Q ss_pred CCCCCEEEEe-----------c-----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790 79 WKVGDQVCAL-----------L-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (335)
Q Consensus 79 ~~~Gd~V~~~-----------~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~ 130 (335)
|++||+|+.. + .+|+|++|+.++.+.++++|+++++.+++.+++++++||++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 9999999752 1 25889999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210 (335)
Q Consensus 131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (335)
+ ..+++++++++|| +| +|++|++++++++..|++|+++++++++++.++++|++.+++....
T Consensus 160 ~-~~~~~~~~~~vlV----------~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------ 221 (329)
T cd08298 160 L-KLAGLKPGQRLGL----------YG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL------ 221 (329)
T ss_pred H-HhhCCCCCCEEEE----------EC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc------
Confidence 9 8899999999999 86 7999999999999999999999999999999999998877765432
Q ss_pred HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790 211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV 289 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (335)
.++++|+++++.+. ..+..++++++++|+++.+|.........+... +.++..+.+..... ...
T Consensus 222 ----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~----------~~~ 286 (329)
T cd08298 222 ----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLT----------RQD 286 (329)
T ss_pred ----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCC----------HHH
Confidence 23579999998654 557889999999999998874322211222222 33455555543221 112
Q ss_pred HHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 290 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 290 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
++.+++++.++.+++. .+.|+++++++|++.+++++..||+|+
T Consensus 287 ~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 287 GEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 3447888889988774 588999999999999999998888874
No 112
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.3e-34 Score=264.61 Aligned_cols=302 Identities=31% Similarity=0.401 Sum_probs=243.9
Q ss_pred cCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCCCCCCCE
Q 019790 7 TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSRWKVGDQ 84 (335)
Q Consensus 7 ~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 84 (335)
+.++.+ +++++.+.|.+.++||+||+.++++|++|+..+.+... ....+|.++|+|++|+|+++|+++++|++||+
T Consensus 5 ~~~~~~--~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 82 (340)
T TIGR00692 5 TKPGYG--AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY 82 (340)
T ss_pred ccCCCC--cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence 345554 89999999999999999999999999999988655421 11124668999999999999999999999999
Q ss_pred EEE---------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC
Q 019790 85 VCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL 137 (335)
Q Consensus 85 V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~ 137 (335)
|++ +...|+|++|++++.+.++++|++++++++ +++.++.+|++++ ...+
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~ 159 (340)
T TIGR00692 83 VSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP 159 (340)
T ss_pred EEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC
Confidence 987 224589999999999999999999998655 5788889999876 3457
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 216 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 216 (335)
.++++++| .+ +|.+|.+++++|+.+|++ |+++.+++++.+.++++|.+.++++...++.+.+.+.+++
T Consensus 160 ~~g~~vlI----------~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~ 228 (340)
T TIGR00692 160 ISGKSVLV----------TG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDG 228 (340)
T ss_pred CCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCC
Confidence 89999999 87 699999999999999996 8888778888888899999888888778888888888888
Q ss_pred CcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChh-HHhhcceEEEEeeccccchhhHHHHHHHHHHHHH
Q 019790 217 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 294 (335)
Q Consensus 217 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (335)
+++|+++||+|+ ..+...+++|+++|+++.+|..... ..++.. .+..+++++.+...... .+.+..+.
T Consensus 229 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 298 (340)
T TIGR00692 229 EGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITGRHM---------FETWYTVS 298 (340)
T ss_pred CCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEecCCc---------hhhHHHHH
Confidence 889999999886 4577889999999999999875322 222333 45567777766542111 11234488
Q ss_pred HHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 295 PAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 295 ~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+++.++.++ +.+.+.+++++++++++.+.+++. ||+|+.+
T Consensus 299 ~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 299 RLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred HHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 899999986 456899999999999999988774 9999864
No 113
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.6e-34 Score=264.12 Aligned_cols=294 Identities=26% Similarity=0.362 Sum_probs=238.0
Q ss_pred cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhc-CCCC-CCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe--
Q 019790 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYP-PPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL-- 88 (335)
Q Consensus 13 ~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~-g~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-- 88 (335)
+.+++++.+.|++.++||+||+.++++|++|++.+. +... .....|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 7 ~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~ 86 (339)
T cd08232 7 GDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPS 86 (339)
T ss_pred CceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccC
Confidence 459999999999999999999999999999998764 3221 112347789999999999999999999999999862
Q ss_pred ------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCC
Q 019790 89 ------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138 (335)
Q Consensus 89 ------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~ 138 (335)
..+|+|++|+.++.+.++++|+++++++++. ..++++||+++.....+
T Consensus 87 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~- 164 (339)
T cd08232 87 RPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL- 164 (339)
T ss_pred CcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-
Confidence 1358999999999999999999999999875 67888999998666666
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHh-CC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-GG 216 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 216 (335)
++++||| .| .|.+|.+++++|+.+|+ +|+++++++++.+.+++++.+.++++++..+ .+.. ..
T Consensus 165 ~~~~VLI----------~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~~~~~ 229 (339)
T cd08232 165 AGKRVLV----------TG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAYAADK 229 (339)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhhhccC
Confidence 8999999 87 68999999999999999 8999998888888888899988888765442 2222 23
Q ss_pred CcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHH
Q 019790 217 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 295 (335)
Q Consensus 217 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (335)
.++|+++||+|+ ..+...+++|+++|+++.+|... .....+...++.+++++.+.... ...++.+++
T Consensus 230 ~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 297 (339)
T cd08232 230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFRF-----------DDEFAEAVR 297 (339)
T ss_pred CCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEecC-----------HHHHHHHHH
Confidence 469999999996 55788899999999999998654 22334455556677787765421 112344788
Q ss_pred HHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790 296 AIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 296 ~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
++.+|.+++ .+.++|+++++++|++.+.+++..||+|+++
T Consensus 298 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 298 LLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 899998764 3678899999999999999888889999875
No 114
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2e-34 Score=266.21 Aligned_cols=318 Identities=30% Similarity=0.419 Sum_probs=240.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCC-CCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC-C
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-R 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~-~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-~ 78 (335)
.|++++..++++..++..+.+.|. +.+++|+||+.++++|++|+..+.+........|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 478999999888555555555543 48999999999999999999887543322222377899999999999999998 8
Q ss_pred CCCCCEEEEec-----CCcceeeEEEecCC----ceEeCCCCCChhhhccCcchHHHHHHHHHHhc-CCCCCCEEEEeec
Q 019790 79 WKVGDQVCALL-----GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVDFC 148 (335)
Q Consensus 79 ~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~-~~~~~~~vli~~~ 148 (335)
|++||+|+++. ..|+|++|++++.. .++++|+++++++++.++...++||+++.... .+++|++++|
T Consensus 81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI--- 157 (352)
T cd08247 81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLV--- 157 (352)
T ss_pred CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEE---
Confidence 99999999875 25899999999987 78999999999999999999999999997777 7999999999
Q ss_pred cccccccccccchHHHHHHHHHhhC-CC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc---HHHHHHHHhC-CCcccEE
Q 019790 149 SISYSDVHGGSSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEETG-GKGVDVI 222 (335)
Q Consensus 149 ~~~~~~~~g~~g~~G~~a~~~a~~~-g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~-~~~~d~v 222 (335)
+|+++.+|.+++++|+.+ |. .++++. ++++.+.++++|++.+++..... +...+.+.+. ++++|++
T Consensus 158 -------~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~v 229 (352)
T cd08247 158 -------LGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLI 229 (352)
T ss_pred -------ECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEE
Confidence 999899999999999998 55 566665 55666677889998888876655 4444444443 6789999
Q ss_pred EeCCCh-hhHHHhhcccc---CCCEEEEEeccCCCccc-----------cChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790 223 LDCMGA-SYFQRNLGSLN---IDGRLFIIGTQGGAKTE-----------LNITSLFAKRLTVQAAGLRSRSTENKALIVS 287 (335)
Q Consensus 223 id~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (335)
|||+|+ .....++++++ ++|+++.++........ ..... +.+..++....+........ .
T Consensus 230 l~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~ 304 (352)
T cd08247 230 LDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARK-LFGSLGLWSYNYQFFLLDPN----A 304 (352)
T ss_pred EECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhh-hhhhhcCCCcceEEEEecCC----H
Confidence 999998 55677899999 99999987533211000 00011 11122111111110000000 1
Q ss_pred HHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790 288 EVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 288 ~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 334 (335)
..++.+++++.++.+++.+.+.++++++++|++.+++++..||++++
T Consensus 305 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 305 DWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred HHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 33455888999999988788999999999999999998888999875
No 115
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=5.4e-34 Score=264.54 Aligned_cols=298 Identities=24% Similarity=0.336 Sum_probs=237.7
Q ss_pred cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe--
Q 019790 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL-- 88 (335)
Q Consensus 13 ~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-- 88 (335)
..+++++.+.|.+.++||+||+.++++|++|++.+.+.... ...+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 27 ~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (364)
T PLN02702 27 NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPG 106 (364)
T ss_pred CceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCC
Confidence 34888899888899999999999999999999988763211 11247789999999999999999999999999862
Q ss_pred -----------------------c---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCE
Q 019790 89 -----------------------L---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES 142 (335)
Q Consensus 89 -----------------------~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~ 142 (335)
. ..|+|++|+.++.+.++++|+++++.+++. ..+..++++++ ...++.++++
T Consensus 107 ~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~ 184 (364)
T PLN02702 107 ISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETN 184 (364)
T ss_pred CCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCE
Confidence 1 148999999999999999999999998874 34555688887 7788999999
Q ss_pred EEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCC--CccHHHHHHHH--hCCC
Q 019790 143 FLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEE--TGGK 217 (335)
Q Consensus 143 vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~~~ 217 (335)
++| +| .|++|++++++|+.+|++ ++++++++++.+.++++|++.++++. ..++.+.+.+. +.+.
T Consensus 185 vlI----------~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T PLN02702 185 VLV----------MG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGG 253 (364)
T ss_pred EEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCC
Confidence 999 96 799999999999999995 67777788888888999998877643 34566666554 3345
Q ss_pred cccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHH
Q 019790 218 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 296 (335)
Q Consensus 218 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (335)
++|++|||+|+ ..+..++++++++|+++.+|.... ...+....+..+++++.+++... ..++.++++
T Consensus 254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~ 321 (364)
T PLN02702 254 GIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRYR-----------NTWPLCLEF 321 (364)
T ss_pred CCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccCh-----------HHHHHHHHH
Confidence 79999999994 667889999999999999986543 23445566677888888765431 122347888
Q ss_pred HHCCccc--cccccccch--hhHHHHHHHHHhCCCceeEEEeC
Q 019790 297 IAVGKVK--PVIYKYLPL--CEAAEAHQLMESSQHIGKIMLVP 335 (335)
Q Consensus 297 ~~~g~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 335 (335)
+.++.+. +.+.+.|++ +++++|++.+.+++..+|+|+.+
T Consensus 322 ~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~ 364 (364)
T PLN02702 322 LRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364 (364)
T ss_pred HHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence 9899875 456677554 89999999999888888999864
No 116
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=4e-34 Score=258.45 Aligned_cols=304 Identities=35% Similarity=0.581 Sum_probs=253.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (335)
|||+++..++.+..+++++.+.|.+.++||+|++.++++|++|+..+.|... .....|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 8999999888776678888888889999999999999999999998877642 12234788999999999999999999
Q ss_pred CCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155 (335)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~ 155 (335)
+++||+|+++. ..|+|++|+.++...++++|+++++..++.++....++++++.....+.++++++|
T Consensus 81 ~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv---------- 150 (309)
T cd05289 81 FKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLI---------- 150 (309)
T ss_pred CCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEE----------
Confidence 99999999985 25899999999999999999999999999999999999999977777999999999
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 235 (335)
+|++|.+|++++++++..|++|+++++++ +.+.++++|.+.+++....++.. .+.++++|++++|+++.....++
T Consensus 151 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~ 225 (309)
T cd05289 151 HGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSL 225 (309)
T ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHH
Confidence 99889999999999999999999998777 77888888988888776655443 44556799999999998888899
Q ss_pred ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 019790 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA 315 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~ 315 (335)
++++++|+++.+|...... . ....+++++....+... ...++.+.+++.++.+.+.+++.|+++++
T Consensus 226 ~~l~~~g~~v~~g~~~~~~-~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (309)
T cd05289 226 ALVKPGGRLVSIAGPPPAE-Q----AAKRRGVRAGFVFVEPD---------GEQLAELAELVEAGKLRPVVDRVFPLEDA 291 (309)
T ss_pred HHHhcCcEEEEEcCCCcch-h----hhhhccceEEEEEeccc---------HHHHHHHHHHHHCCCEEEeeccEEcHHHH
Confidence 9999999999998654321 1 22345566555544211 23445588889999988878899999999
Q ss_pred HHHHHHHHhCCCceeEEE
Q 019790 316 AEAHQLMESSQHIGKIML 333 (335)
Q Consensus 316 ~~a~~~~~~~~~~gkvvi 333 (335)
+++++.+..++..+|+++
T Consensus 292 ~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 292 AEAHERLESGHARGKVVL 309 (309)
T ss_pred HHHHHHHHhCCCCCcEeC
Confidence 999999998888788774
No 117
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3.5e-34 Score=262.25 Aligned_cols=301 Identities=30% Similarity=0.408 Sum_probs=249.5
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (335)
Q Consensus 2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (335)
||+++..+|. .+++++.+.|.+.+++|+|++.++++|++|+..+.|..+. ..+|.++|+|++|+|+++|+++++|++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCccccc
Confidence 6888888854 3999999999999999999999999999999998887643 235789999999999999999999999
Q ss_pred CCEEEE----------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790 82 GDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (335)
Q Consensus 82 Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 133 (335)
||+|+. +...|+|++|+.++.+.++++|+++++.+++.+...+.+||+++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~ 157 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD 157 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence 999973 2235899999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 213 (335)
.++.+++++|| +| .|.+|.+++++|+.+|++|+++++++++.+.++++|++.+++.........
T Consensus 158 -~~~~~~~~vlI----------~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---- 221 (330)
T cd08245 158 -AGPRPGERVAV----------LG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA---- 221 (330)
T ss_pred -hCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----
Confidence 78999999999 86 677999999999999999999999999999998899888887665443322
Q ss_pred hCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790 214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292 (335)
Q Consensus 214 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (335)
.. +++|+++||+++ .....++++++++|+++.++.............++.++.++.+...... ..++.
T Consensus 222 ~~-~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 290 (330)
T cd08245 222 AA-GGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR----------ADLQE 290 (330)
T ss_pred cc-CCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH----------HHHHH
Confidence 22 479999999875 5578889999999999999865433223334556677888877765321 12344
Q ss_pred HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 293 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
+++++.++.+.+ ..+.+++++++++++.+.+++..||+|+
T Consensus 291 ~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 291 ALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 778888998876 4578999999999999999988888874
No 118
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=3.8e-34 Score=259.33 Aligned_cols=262 Identities=37% Similarity=0.571 Sum_probs=226.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
||+++...++ +..+++++.+.|++.+++|+||+.++++|++|.+...|.... ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCC
Confidence 8999987643 466999999999999999999999999999999988886522 23477899999999999999999999
Q ss_pred CCCEEEEecC----------------------------CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790 81 VGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (335)
Q Consensus 81 ~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~ 132 (335)
+||+|+++.. .|+|++|++++.+.++++|+++++++++ ++.+..+||+++.
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~ 157 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVA 157 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHH
Confidence 9999998642 4899999999999999999999999887 7888899999998
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe--cChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA--GSEEKLAVCKDLGADVCINYKTEDFVARV 210 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 210 (335)
....+.+++++|| .| .+.+|.+++++|+.+|++|++++ +++++.+.++++|++.+ ++...++...+
T Consensus 158 ~~~~~~~g~~vlI----------~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l 225 (306)
T cd08258 158 ERSGIRPGDTVVV----------FG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELV 225 (306)
T ss_pred HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHH
Confidence 8889999999999 87 79999999999999999988763 34556777788999887 88888888888
Q ss_pred HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecccc
Q 019790 211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 277 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (335)
.+.+.++++|+++||+|+ ..+...+++|+++|+++.+|........+++..++.+++++.|++++..
T Consensus 226 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 293 (306)
T cd08258 226 NEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTP 293 (306)
T ss_pred HHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCch
Confidence 888877889999999975 5577889999999999999887644456778888889999999988654
No 119
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.5e-33 Score=252.58 Aligned_cols=306 Identities=34% Similarity=0.502 Sum_probs=240.7
Q ss_pred EEcCCCCCcce--EEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790 5 VITQPGSPEVL--QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 5 ~~~~~~~~~~l--~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
+++..++++.+ ++++.+.|++.++||+|++.++++|++|++...|..+. ....|..+|||++|+|+++|++++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~ 81 (319)
T cd08267 2 VYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK 81 (319)
T ss_pred eeCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence 34556666555 88888999999999999999999999999988776532 122366899999999999999999999
Q ss_pred CCCEEEEecC---CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790 81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157 (335)
Q Consensus 81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g 157 (335)
+||+|+++.. .|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++++| +|
T Consensus 82 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli----------~g 151 (319)
T cd08267 82 VGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI----------NG 151 (319)
T ss_pred CCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE----------Ec
Confidence 9999998863 5899999999999999999999999999999999999999988778999999999 99
Q ss_pred ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh--hHHHhh
Q 019790 158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNL 235 (335)
Q Consensus 158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~ 235 (335)
++|.+|++++++|+.+|++|++++++ ++.+.++++|.+.+++....++. ...+.++++|++++|+|+. .....+
T Consensus 152 ~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~ 227 (319)
T cd08267 152 ASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLYRAS 227 (319)
T ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHHHhh
Confidence 88999999999999999999998865 77888888998888876655543 4455667899999999953 233444
Q ss_pred ccccCCCEEEEEeccCCCccccC---hhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 019790 236 GSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 312 (335)
Q Consensus 236 ~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 312 (335)
..++++|+++.+|.......... ..........+........ .+.++.+++++.++.+.+.+.+.|++
T Consensus 228 ~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~ 298 (319)
T cd08267 228 LALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPN---------AEDLEQLAELVEEGKLKPVIDSVYPL 298 (319)
T ss_pred hccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCC---------HHHHHHHHHHHHCCCeeeeeeeEEcH
Confidence 45999999999987553321111 0111111222222221110 23455588889999988888899999
Q ss_pred hhHHHHHHHHHhCCCceeEEE
Q 019790 313 CEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 313 ~~~~~a~~~~~~~~~~gkvvi 333 (335)
+++++|++.+.+++..+|+++
T Consensus 299 ~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 299 EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHHHHHhcCCCCCcEeC
Confidence 999999999998888788774
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=1.1e-32 Score=246.42 Aligned_cols=290 Identities=33% Similarity=0.545 Sum_probs=243.2
Q ss_pred CcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEe
Q 019790 28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP 107 (335)
Q Consensus 28 ~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ 107 (335)
+||+||+.++++|++|++...|..+ .+|.++|+|++|+|+++|+++..|++||+|+++. .|+|++|+.++.+.+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~ 76 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK 76 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence 5899999999999999999887652 3478999999999999999999999999999985 48999999999999999
Q ss_pred CCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH
Q 019790 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 187 (335)
Q Consensus 108 ~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~ 187 (335)
+|+++++.+++.++++..++|.++.+..++++|++++| +|+.|.+|++++++++.+|++|+++++++++.
T Consensus 77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv----------~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 146 (293)
T cd05195 77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLI----------HAAAGGVGQAAIQLAQHLGAEVFATVGSEEKR 146 (293)
T ss_pred CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEE----------ecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 99999999999999999999999988889999999999 99899999999999999999999999999999
Q ss_pred HHHHHcC--CCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCc-cccChhHHhh
Q 019790 188 AVCKDLG--ADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK-TELNITSLFA 264 (335)
Q Consensus 188 ~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 264 (335)
+.+++.+ ++.+++.....+.+.+.+.+.++++|++++|+|+..+..++++++++|+++.+|...... ..+.... +.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~ 225 (293)
T cd05195 147 EFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FL 225 (293)
T ss_pred HHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhh-hc
Confidence 9988887 677788777778888888888888999999999988888999999999999998655321 1222222 34
Q ss_pred cceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
+++++....+...... ......+.+..+.+++.++.+++.....+++++++++++.+..++..+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 226 RNVSFSSVDLDQLARE-RPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cCCeEEEEeHHHHhhh-ChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 5666666554332111 1112344566688999999998888888999999999999998888788764
No 121
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=4.2e-32 Score=242.49 Aligned_cols=284 Identities=32% Similarity=0.553 Sum_probs=237.3
Q ss_pred EEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCC
Q 019790 32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111 (335)
Q Consensus 32 I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 111 (335)
||+.++++|++|++...|..+. |.++|+|++|+|+++|++++.|++||+|++++. |+|++|+.++.+.++++|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~----~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~~~~p~~ 76 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-GSFATYVRTDARLVVPIPDG 76 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCC----CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-CceeeEEEccHHHeEECCCC
Confidence 8999999999999998876542 578999999999999999999999999999864 89999999999999999999
Q ss_pred CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 191 (335)
Q Consensus 112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~ 191 (335)
+++.+++.++++..++|+++.+...+.++++++| +|+.+.+|++++++++.+|++|+++++++++.+.++
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv----------~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 146 (288)
T smart00829 77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLI----------HAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR 146 (288)
T ss_pred CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEE----------ecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 9999999999999999999878889999999999 998999999999999999999999999999999999
Q ss_pred HcCC--CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceE
Q 019790 192 DLGA--DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT 268 (335)
Q Consensus 192 ~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~ 268 (335)
++|. +.++++...++.+.+.+.+.++++|+++|++++..+..++++++++|+++.+|..... ...++... +.++++
T Consensus 147 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~ 225 (288)
T smart00829 147 ELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVS 225 (288)
T ss_pred HcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCce
Confidence 9997 6778877777888888888877899999999987788899999999999999865421 12233333 456667
Q ss_pred EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
+.+..+.... .. .....+.++.+++++.++++.+...+.|++++++++++.+..++..+|+++
T Consensus 226 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 226 YHAVDLDALE-EG-PDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EEEEEHHHhh-cC-hHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 6666543221 01 111233455688889999887766788999999999999998887778764
No 122
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.5e-31 Score=239.36 Aligned_cols=232 Identities=22% Similarity=0.319 Sum_probs=191.3
Q ss_pred CCCCceEEEEEEecCCCC------CCCCCCEEEEec----------------------------------CCcceeeEEE
Q 019790 60 YPGLECSGTILSVGKNVS------RWKVGDQVCALL----------------------------------GGGGYAEKVA 99 (335)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~~~~~~ 99 (335)
++|||++|+|+++|++++ +|++||||+... .+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999998 899999996421 1489999999
Q ss_pred ecCC-ceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-E
Q 019790 100 VPAG-QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-V 177 (335)
Q Consensus 100 ~~~~-~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V 177 (335)
++++ .++++|+++++++++.+++...|+|+++.+ ....+++++|| +| .|++|++++|+|+.+|++ |
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV----------~G-~G~vG~~~~~~ak~~G~~~V 148 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLV----------VG-AGMLGLTAAAAAAAAGAARV 148 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEE
Confidence 9997 699999999999999999999999999854 45569999999 97 599999999999999996 8
Q ss_pred EEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCC-Ccc
Q 019790 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKT 255 (335)
Q Consensus 178 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~ 255 (335)
+++++++++++.++++|++.+++... ..+.+.+.+.+.++|++|||+|+. .+..+++.++++|+++.+|.... ...
T Consensus 149 i~~~~~~~r~~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~ 226 (280)
T TIGR03366 149 VAADPSPDRRELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPV 226 (280)
T ss_pred EEECCCHHHHHHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCce
Confidence 88888999999999999998887643 245566777777899999999875 47889999999999999997543 334
Q ss_pred ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCC--c--cccccccccchhhH
Q 019790 256 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG--K--VKPVIYKYLPLCEA 315 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--~~~~~~~~~~l~~~ 315 (335)
+++...++.+++++.++..... . .++++++++.++ . ++++++++|+|+|+
T Consensus 227 ~i~~~~~~~~~~~i~g~~~~~~--~--------~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 227 ALDPEQVVRRWLTIRGVHNYEP--R--------HLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred eeCHHHHHhCCcEEEecCCCCH--H--------HHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 6778888899999999765321 1 133377788764 3 44678999999874
No 123
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=3.7e-30 Score=219.41 Aligned_cols=301 Identities=21% Similarity=0.278 Sum_probs=239.7
Q ss_pred cceEEEeec---CCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCC----CceEEEEEEecCCCCCCCCCCEE
Q 019790 13 EVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG----LECSGTILSVGKNVSRWKVGDQV 85 (335)
Q Consensus 13 ~~l~~~~~~---~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~vG~~~~~~~~Gd~V 85 (335)
+++.++... ..++.+++|+||.+|-+..|.-...+....+...-.|+.|| ...+|+|++. +-+++++||.|
T Consensus 20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v 97 (343)
T KOG1196|consen 20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLV 97 (343)
T ss_pred ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceE
Confidence 556555544 45678899999999999988765544433322222234444 2678999995 55679999999
Q ss_pred EEecCCcceeeEEEecCCceE--eCC--CCCChhhh-ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790 86 CALLGGGGYAEKVAVPAGQVL--PVP--SGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS 160 (335)
Q Consensus 86 ~~~~~~g~~~~~~~~~~~~~~--~~p--~~~~~~~a-a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g 160 (335)
+++. +|.||.+++..... +++ .+.++.-. ..+.++..|||..++++...++|++++| .+++|
T Consensus 98 ~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~V----------SaAsG 164 (343)
T KOG1196|consen 98 WGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFV----------SAASG 164 (343)
T ss_pred EEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEE----------eeccc
Confidence 9995 79999999775433 333 34443333 2488999999999999999999999999 99999
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccc
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l 238 (335)
++|..+.|+|+.+||+|+.++.++++...++ ++|.+..+||.++ +..+.+++ ...+++|+.||++|+..+...+..|
T Consensus 165 AvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r-~~P~GIDiYfeNVGG~~lDavl~nM 243 (343)
T KOG1196|consen 165 AVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR-CFPEGIDIYFENVGGKMLDAVLLNM 243 (343)
T ss_pred hhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHH-hCCCcceEEEeccCcHHHHHHHHhh
Confidence 9999999999999999999999999999987 5899999999998 56666655 5556999999999999999999999
Q ss_pred cCCCEEEEEeccCCCccc-----cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchh
Q 019790 239 NIDGRLFIIGTQGGAKTE-----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLC 313 (335)
Q Consensus 239 ~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~ 313 (335)
+..||++.+|.....+.+ .+....+.|++++.++......+. ....++++.+++++|+++-..+-.-+|+
T Consensus 244 ~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~-----~~k~ld~l~~~ikegKI~y~edi~~Gle 318 (343)
T KOG1196|consen 244 NLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDK-----YPKFLDFLLPYIKEGKITYVEDIADGLE 318 (343)
T ss_pred hhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhh-----hHHHHHHHHHHHhcCceEEehhHHHHHh
Confidence 999999999988754322 234566889999999776655432 3456677999999999988877778899
Q ss_pred hHHHHHHHHHhCCCceeEEEe
Q 019790 314 EAAEAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 314 ~~~~a~~~~~~~~~~gkvvi~ 334 (335)
..++||.-|.+++++||-++.
T Consensus 319 n~P~A~vglf~GkNvGKqiv~ 339 (343)
T KOG1196|consen 319 NGPSALVGLFHGKNVGKQLVK 339 (343)
T ss_pred ccHHHHHHHhccCcccceEEE
Confidence 999999999999999998875
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.8e-30 Score=229.11 Aligned_cols=237 Identities=39% Similarity=0.645 Sum_probs=205.9
Q ss_pred cEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEec-------------------
Q 019790 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL------------------- 89 (335)
Q Consensus 29 eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~------------------- 89 (335)
||+|+|.++++|+.|+..+.|..+.....|.++|+|++|+|+++|++++.|++||+|+++.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 6899999999999999999887653334578899999999999999999999999999875
Q ss_pred ----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHH
Q 019790 90 ----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTF 165 (335)
Q Consensus 90 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~ 165 (335)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.+++++|| +|+.+ +|++
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli----------~g~~~-~G~~ 149 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLV----------LGAGG-VGLL 149 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEE----------ECCCH-HHHH
Confidence 25899999999999999999999999999999999999999987777799999999 99766 9999
Q ss_pred HHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEE
Q 019790 166 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRL 244 (335)
Q Consensus 166 a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~ 244 (335)
++++++..|.+|+++++++++.+.+++++.+.+++.....+...+. .+.++++|++++|+++ ......+++++++|++
T Consensus 150 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~ 228 (271)
T cd05188 150 AAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRI 228 (271)
T ss_pred HHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEE
Confidence 9999999999999999999999999999988888887777766666 6666789999999998 6678889999999999
Q ss_pred EEEeccCCCccccChhHHhhcceEEEEeecccc
Q 019790 245 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 277 (335)
Q Consensus 245 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (335)
+.+|..............+.+++++.++.....
T Consensus 229 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (271)
T cd05188 229 VVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR 261 (271)
T ss_pred EEEccCCCCCCcccHHHHHhcceEEEEeecCCH
Confidence 999876654333335566788999998876644
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=7.8e-31 Score=253.99 Aligned_cols=304 Identities=26% Similarity=0.346 Sum_probs=258.2
Q ss_pred CCCcceEEEeecCC---CCCCCcEEEEEEEeecCcchhhhhcCCCCCCC------CCCCCCCCceEEEEEEecCCCCCCC
Q 019790 10 GSPEVLQLQEVEDP---QIKDDEVLIKVEATALNRADTLQRKGSYPPPK------GASPYPGLECSGTILSVGKNVSRWK 80 (335)
Q Consensus 10 ~~~~~l~~~~~~~~---~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (335)
|+...++|.+.+.. +..++.=+.-|.|++||..|+....|+.+... .....+|-||+|+ .+
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence 55667888888754 44667788999999999999999999875421 1235678888886 56
Q ss_pred CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS 160 (335)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g 160 (335)
.|.||+++.+--++++.+.++.+.+|.+|.+..+++|++.|+.+.|||++|..++..++|+++|| ++|+|
T Consensus 1494 ~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLI----------HaGsG 1563 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILI----------HAGSG 1563 (2376)
T ss_pred CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEE----------ecCCC
Confidence 79999999988899999999999999999999999999999999999999999999999999999 99999
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhc
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 236 (335)
++|++||.+|.++|++|+-++.+.++++++.+ +....+-|+++.+|...+..+|.|+|+|+|++....+.++..++
T Consensus 1564 GVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiR 1643 (2376)
T KOG1202|consen 1564 GVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIR 1643 (2376)
T ss_pred chhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHH
Confidence 99999999999999999999999999999874 34556678888999999999999999999999999999999999
Q ss_pred cccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA 316 (335)
Q Consensus 237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 316 (335)
||+-+|||..+|...-+..+.-....+.++.+++|..+.....-+ .+.+++...-+.+-+++|.++|+.+++|+-.+++
T Consensus 1644 CLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege-~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE 1722 (2376)
T KOG1202|consen 1644 CLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGE-EEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVE 1722 (2376)
T ss_pred HHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCc-HHHHHHHHHHHHhhhccCceeccccccccHHHHH
Confidence 999999999999776543333344567899999999988764322 2334443333445566667999999999999999
Q ss_pred HHHHHHHhCCCceeEEEe
Q 019790 317 EAHQLMESSQHIGKIMLV 334 (335)
Q Consensus 317 ~a~~~~~~~~~~gkvvi~ 334 (335)
+||++|.+++++||+|++
T Consensus 1723 ~AFRfMasGKHIGKVvik 1740 (2376)
T KOG1202|consen 1723 DAFRFMASGKHIGKVVIK 1740 (2376)
T ss_pred HHHHHHhccCccceEEEE
Confidence 999999999999999985
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.2e-27 Score=213.69 Aligned_cols=251 Identities=27% Similarity=0.405 Sum_probs=199.2
Q ss_pred CCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcC
Q 019790 57 ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH 136 (335)
Q Consensus 57 ~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~ 136 (335)
+|.++|+|++|+|+++|+++++|++||+|+++ +.|++|+.++.+.++++|++++..+++.+ .++++||+++ ...+
T Consensus 20 ~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~ 94 (277)
T cd08255 20 LPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAE 94 (277)
T ss_pred CCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcC
Confidence 68999999999999999999999999999998 46999999999999999999999999888 8899999998 4688
Q ss_pred CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcC-CCEEEeCCCccHHHHHHHHh
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEET 214 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 214 (335)
+.+++++|| +| .|.+|++++++|+++|++ |+++++++++.+.++++| ++.+++... ..+
T Consensus 95 ~~~g~~vlI----------~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~ 155 (277)
T cd08255 95 PRLGERVAV----------VG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA--------DEI 155 (277)
T ss_pred CCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch--------hhh
Confidence 999999999 96 799999999999999998 999999999999888888 555443321 123
Q ss_pred CCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH--HHHHHHHH
Q 019790 215 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA--LIVSEVEK 291 (335)
Q Consensus 215 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 291 (335)
.++++|++|||++. ......+++++++|+++.+|..... .......+..+.+++.+..+......... ....+.++
T Consensus 156 ~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T cd08255 156 GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLE 234 (277)
T ss_pred cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHH
Confidence 45689999999885 4577889999999999999876544 22222334446667777665432111100 01123455
Q ss_pred HHHHHHHCCccccccccccchhhHHHHHHHHHhC-CCceeEE
Q 019790 292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-QHIGKIM 332 (335)
Q Consensus 292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvv 332 (335)
.+++++.++.+++.+.+.|+++++++|++.++++ ....|++
T Consensus 235 ~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 235 EALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred HHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 5889999999888888999999999999999876 3445665
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.75 E-value=2.5e-17 Score=130.10 Aligned_cols=116 Identities=41% Similarity=0.738 Sum_probs=109.0
Q ss_pred hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC-hhhHHHhhcccc
Q 019790 161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLN 239 (335)
Q Consensus 161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g-~~~~~~~~~~l~ 239 (335)
++|++++|+|+++|++|+++++++++++.++++|++.++++++.++.+.+++.+++.++|++|||+| ...+..++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999999999889999999999 567899999999
Q ss_pred CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccc
Q 019790 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS 276 (335)
Q Consensus 240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (335)
++|+++.+|.......+++...++.+++++.++....
T Consensus 81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 9999999999886667889999999999999998876
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.72 E-value=1.9e-17 Score=126.60 Aligned_cols=82 Identities=40% Similarity=0.618 Sum_probs=70.0
Q ss_pred CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEec-----------------
Q 019790 27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL----------------- 89 (335)
Q Consensus 27 ~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------- 89 (335)
|+||+|||.++|||++|++.+.|.......+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999996555566799999999999999999999999999998632
Q ss_pred ----------CCcceeeEEEecCCceEeC
Q 019790 90 ----------GGGGYAEKVAVPAGQVLPV 108 (335)
Q Consensus 90 ----------~~g~~~~~~~~~~~~~~~~ 108 (335)
.+|+|++|+.++++.++++
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 2589999999999998874
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.54 E-value=1.8e-14 Score=113.20 Aligned_cols=124 Identities=35% Similarity=0.498 Sum_probs=81.3
Q ss_pred cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC--hhhH-HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEE
Q 019790 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 269 (335)
Q Consensus 193 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 269 (335)
+|+++++||++.++ +..++||+||||+| .+.+ ..++++| ++|+++.++. .........+...+
T Consensus 1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence 68999999997766 44568999999999 6554 6677888 9999999874 11111111222233
Q ss_pred EEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790 270 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333 (335)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 333 (335)
....+...... ...++.++.+.+++.+|+++|.+.++||++++++|++.+++++..||+|+
T Consensus 67 ~~~~~~~~~~~---~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RYSFLFSVDPN---AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EEECCC-H--H---HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEEEEEecCCC---chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33333221111 12344567799999999999999999999999999999999999999986
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.29 E-value=1.9e-10 Score=106.69 Aligned_cols=176 Identities=14% Similarity=0.126 Sum_probs=131.1
Q ss_pred HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790 127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205 (335)
Q Consensus 127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 205 (335)
.|.++.+..+ ..+|++|+| .| .|++|+.+++.++.+|++|+++++++.+.+.++.+|+..+ +
T Consensus 188 ~~~~i~r~t~~~l~GktVvV----------iG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~----- 250 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVV----------AG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T----- 250 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----
Confidence 3455545444 468999999 88 7999999999999999999999999999999999998443 1
Q ss_pred HHHHHHHHhCCCcccEEEeCCChhh-HHHh-hccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790 206 FVARVKEETGGKGVDVILDCMGASY-FQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA 283 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~~~-~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (335)
..+ .. +++|+||+|+|+.. +... +..++++|+++.+|.. ..+++...+..+++++.++....... ..+
T Consensus 251 ~~e----~v--~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~~~-~~~ 320 (413)
T cd00401 251 MEE----AV--KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVDRY-ELP 320 (413)
T ss_pred HHH----HH--cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcceE-EcC
Confidence 111 22 25899999999865 5554 9999999999999854 34688888888899998876653211 000
Q ss_pred HHHHHHHHHHHHHHHCCcc---ccccccc-----cchh-hHHHHHHHHHhCCCc-eeEEEeC
Q 019790 284 LIVSEVEKNVWPAIAVGKV---KPVIYKY-----LPLC-EAAEAHQLMESSQHI-GKIMLVP 335 (335)
Q Consensus 284 ~~~~~~~~~~~~~~~~g~~---~~~~~~~-----~~l~-~~~~a~~~~~~~~~~-gkvvi~~ 335 (335)
. ...+.++.+|.+ .+.+++. ++|+ ++.++++.+.+.... -|+++.|
T Consensus 321 ~------g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 321 D------GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred C------cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 0 017789999986 4456777 8899 999999999876542 4676654
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.17 E-value=7.2e-10 Score=105.46 Aligned_cols=127 Identities=17% Similarity=0.192 Sum_probs=95.5
Q ss_pred CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCc-----------
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTE----------- 204 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~----------- 204 (335)
..++++|+| .| .|++|+++++.|+.+|++|++++.++++++.++++|++.+ +|..+.
T Consensus 162 ~~pg~kVlV----------iG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~ 230 (509)
T PRK09424 162 KVPPAKVLV----------IG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVM 230 (509)
T ss_pred CcCCCEEEE----------EC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhc
Confidence 457899999 88 7999999999999999999999999999999999999854 554321
Q ss_pred --cHHHHHHHHhCC--CcccEEEeCCChh------h-HHHhhccccCCCEEEEEeccCCCc--cccChhHHhh-cceEEE
Q 019790 205 --DFVARVKEETGG--KGVDVILDCMGAS------Y-FQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFA-KRLTVQ 270 (335)
Q Consensus 205 --~~~~~~~~~~~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~ 270 (335)
++.+...+.... +++|++|+|++.. . .+.+++.++++|+++.+|...+.. .+.+...++. +++++.
T Consensus 231 s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~ 310 (509)
T PRK09424 231 SEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTII 310 (509)
T ss_pred chhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEE
Confidence 222222232221 4799999999852 2 488999999999999998754332 3444445555 789998
Q ss_pred Eeec
Q 019790 271 AAGL 274 (335)
Q Consensus 271 ~~~~ 274 (335)
|.+-
T Consensus 311 Gv~n 314 (509)
T PRK09424 311 GYTD 314 (509)
T ss_pred EeCC
Confidence 8763
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.26 E-value=5.2e-06 Score=73.94 Aligned_cols=167 Identities=19% Similarity=0.203 Sum_probs=97.9
Q ss_pred cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHc----CCCEEEeCCCccHHH
Q 019790 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVA 208 (335)
Q Consensus 135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~ 208 (335)
..+.++++||. +| +|. |..+.++++..|. +|++++.+++..+.+++. +...+. ....+
T Consensus 73 ~~~~~g~~VLD----------iG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--- 136 (272)
T PRK11873 73 AELKPGETVLD----------LG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--- 136 (272)
T ss_pred ccCCCCCEEEE----------eC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc---
Confidence 56789999999 87 566 8888888888765 699999999988888753 332211 11111
Q ss_pred HHHHHh-CCCcccEEEeCC------Ch-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh
Q 019790 209 RVKEET-GGKGVDVILDCM------GA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 280 (335)
Q Consensus 209 ~~~~~~-~~~~~d~vid~~------g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (335)
+.+.. ....||+|+.+. .. ..+..+++.|+++|+++..+..... .++ ....+...+.+.........
T Consensus 137 -~~~l~~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~ 211 (272)
T PRK11873 137 -IEALPVADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG--ELP--EEIRNDAELYAGCVAGALQE 211 (272)
T ss_pred -hhhCCCCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC--CCC--HHHHHhHHHHhccccCCCCH
Confidence 12211 234799998543 11 3478899999999999987654322 121 11112222221111111111
Q ss_pred hHHHHHHHHHHHHHHHHHCCccc---cccccccchhhHHHHHHHH--HhCCCceeEE
Q 019790 281 NKALIVSEVEKNVWPAIAVGKVK---PVIYKYLPLCEAAEAHQLM--ESSQHIGKIM 332 (335)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~a~~~~--~~~~~~gkvv 332 (335)
+.+.+++.+..+. ......++++++.++++.+ .+++..++.+
T Consensus 212 ----------~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 212 ----------EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred ----------HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceE
Confidence 1144555553333 3345678899999999988 5555445544
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.20 E-value=1.5e-05 Score=76.02 Aligned_cols=105 Identities=23% Similarity=0.326 Sum_probs=78.8
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCC-------------
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT------------- 203 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~------------- 203 (335)
.++.+++| .| .|.+|+++++.++.+|++|+++++++++++.++++|++.+ ++..+
T Consensus 162 vp~akVlV----------iG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s 230 (511)
T TIGR00561 162 VPPAKVLV----------IG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMS 230 (511)
T ss_pred CCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecC
Confidence 35688999 88 7999999999999999999999999999999999998763 22211
Q ss_pred ccHHHHHHHHhC--CCcccEEEeCC---Chh----hHHHhhccccCCCEEEEEeccCCC
Q 019790 204 EDFVARVKEETG--GKGVDVILDCM---GAS----YFQRNLGSLNIDGRLFIIGTQGGA 253 (335)
Q Consensus 204 ~~~~~~~~~~~~--~~~~d~vid~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~ 253 (335)
.++.+...+.+. .+++|++|+|+ |.. .....++.+++++.++.++...+.
T Consensus 231 ~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GG 289 (511)
T TIGR00561 231 EEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGG 289 (511)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCC
Confidence 122222222222 24699999999 542 247789999999999998766554
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.19 E-value=0.00024 Score=63.89 Aligned_cols=110 Identities=20% Similarity=0.294 Sum_probs=80.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.+.+++| .| .|.+|..+++.++.+|++|++.+++.++.+.++++|...+ .. ..+.+... .
T Consensus 151 ~g~kvlV----------iG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~------~~l~~~l~--~ 210 (296)
T PRK08306 151 HGSNVLV----------LG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL------SELAEEVG--K 210 (296)
T ss_pred CCCEEEE----------EC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH------HHHHHHhC--C
Confidence 5789999 88 7999999999999999999999999888888888886533 11 12333332 5
Q ss_pred ccEEEeCCChhhH-HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEE
Q 019790 219 VDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 271 (335)
Q Consensus 219 ~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 271 (335)
+|+||+|++...+ ...+..+++++.++.++...+. ..+. ....++++..+
T Consensus 211 aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~~pgg-td~~--~a~~~Gv~~~~ 261 (296)
T PRK08306 211 IDIIFNTIPALVLTKEVLSKMPPEALIIDLASKPGG-TDFE--YAEKRGIKALL 261 (296)
T ss_pred CCEEEECCChhhhhHHHHHcCCCCcEEEEEccCCCC-cCee--ehhhCCeEEEE
Confidence 8999999987643 5677889999999998766644 2332 22334555553
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.96 E-value=0.00013 Score=68.43 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=78.3
Q ss_pred HHHHHHHHhcCCC-CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790 126 TVWSTVFMTSHLS-PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 204 (335)
Q Consensus 126 ~a~~~l~~~~~~~-~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~ 204 (335)
.+|.++.+..++. .|++++| .| .|.+|..+++.++.+|++|+++++++.+...+...|+. +.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlV----------iG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~---- 260 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVV----------AG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT---- 260 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC----
Confidence 3566665554544 8999999 88 79999999999999999999999888877666666654 221
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChhh-HH-HhhccccCCCEEEEEeccCC
Q 019790 205 DFVARVKEETGGKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~~ 252 (335)
.. +.. +++|++|+|+|... +. ..+..+++++.++.+|....
T Consensus 261 -l~----eal--~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 261 -ME----EAA--ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred -HH----HHH--hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 11 222 25899999999865 43 57889999999999887653
No 136
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.82 E-value=0.0002 Score=60.08 Aligned_cols=116 Identities=22% Similarity=0.214 Sum_probs=80.6
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH---
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV--- 189 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~--- 189 (335)
+....-++..+...|. +.....++++++||- +| ++.|..++-+++..| +|+.+.+.++-.+.
T Consensus 48 pi~~gqtis~P~~vA~--m~~~L~~~~g~~VLE----------IG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~ 112 (209)
T COG2518 48 PIGCGQTISAPHMVAR--MLQLLELKPGDRVLE----------IG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARR 112 (209)
T ss_pred cCCCCceecCcHHHHH--HHHHhCCCCCCeEEE----------EC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHH
Confidence 3333444444444444 336678999999999 88 667999999999988 99999988774444
Q ss_pred -HHHcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEEe
Q 019790 190 -CKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 190 -~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 248 (335)
++.+|...+ +...+.. +.+....+||.|+-+.+.... ...+++|+++|+++..-
T Consensus 113 ~L~~lg~~nV~v~~gDG~-----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 113 NLETLGYENVTVRHGDGS-----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV 169 (209)
T ss_pred HHHHcCCCceEEEECCcc-----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence 445776433 3333321 223334699999998887765 66799999999998663
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.79 E-value=0.0004 Score=64.77 Aligned_cols=102 Identities=16% Similarity=0.167 Sum_probs=76.5
Q ss_pred HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790 127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205 (335)
Q Consensus 127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 205 (335)
+|.++.+..+ ...|++++| .| .|.+|..+++.++.+|++|+++..++.+...+...|+. +.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvV----------iG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~----- 243 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVV----------AG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT----- 243 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEE----------EC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----
Confidence 4455545444 368999999 88 89999999999999999999998888777666666763 221
Q ss_pred HHHHHHHHhCCCcccEEEeCCChhh-HH-HhhccccCCCEEEEEeccC
Q 019790 206 FVARVKEETGGKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 251 (335)
..+.+ ++.|++|+++|... +. ..+..+++++.++.+|...
T Consensus 244 leeal------~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 244 MEEAA------KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred HHHHH------hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 11111 25799999999866 43 4788999999999888654
No 138
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.74 E-value=0.0013 Score=61.03 Aligned_cols=141 Identities=13% Similarity=0.172 Sum_probs=84.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCC---Ch--h
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCM---GA--S 229 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~---g~--~ 229 (335)
.| .|.+|+.+++.++.+|++|+++++++++.+.+.. ++......... .+.+.+... .+|++|+|+ +. .
T Consensus 173 iG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~--~aDvVI~a~~~~g~~~p 246 (370)
T TIGR00518 173 IG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK--RADLLIGAVLIPGAKAP 246 (370)
T ss_pred Ec-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc--cCCEEEEccccCCCCCC
Confidence 76 7999999999999999999999999888777654 44432222221 123344433 589999998 33 1
Q ss_pred h--HHHhhccccCCCEEEEEeccCCCccccC-hh-----HHhhcceEEEEe-eccccchhhHHHH-HHHHHHHHHHHHHC
Q 019790 230 Y--FQRNLGSLNIDGRLFIIGTQGGAKTELN-IT-----SLFAKRLTVQAA-GLRSRSTENKALI-VSEVEKNVWPAIAV 299 (335)
Q Consensus 230 ~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 299 (335)
. ....+..+++++.++.++...+...... .. .....+++..+. .+...-+.+.... -+..++.+..+..+
T Consensus 247 ~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l~~~l~~~~~~ 326 (370)
T TIGR00518 247 KLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNATMPYVLELANH 326 (370)
T ss_pred cCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 3667888999999999886655432211 11 112234555554 2333323333333 33344555566655
Q ss_pred Ccc
Q 019790 300 GKV 302 (335)
Q Consensus 300 g~~ 302 (335)
|.+
T Consensus 327 g~~ 329 (370)
T TIGR00518 327 GWR 329 (370)
T ss_pred ccc
Confidence 643
No 139
>PLN02494 adenosylhomocysteinase
Probab=97.72 E-value=0.0004 Score=65.47 Aligned_cols=101 Identities=16% Similarity=0.158 Sum_probs=77.4
Q ss_pred HHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790 128 WSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206 (335)
Q Consensus 128 ~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 206 (335)
+.++.+..++ -.|++++| .| .|.+|..+++.++.+|++|+++.+++.+...+...|+..+ + .
T Consensus 241 ~d~i~r~t~i~LaGKtVvV----------iG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----l 303 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVI----------CG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-T-----L 303 (477)
T ss_pred HHHHHHhcCCccCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-c-----H
Confidence 5555555444 67899999 87 8999999999999999999999988877666666776432 1 1
Q ss_pred HHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCCCEEEEEeccC
Q 019790 207 VARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+.+ ...|+++.|.|+.. ....+..|++++.++.+|...
T Consensus 304 eEal------~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 304 EDVV------SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred HHHH------hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 1222 24799999999865 367899999999999998743
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.66 E-value=0.0012 Score=58.06 Aligned_cols=140 Identities=19% Similarity=0.278 Sum_probs=89.2
Q ss_pred CCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157 (335)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g 157 (335)
.+.+||+++... +|.+|.. +...++.+++++++..+. .+.... ....+.. .+.++.+||- .|
T Consensus 66 p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLD----------iG 127 (250)
T PRK00517 66 PIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLD----------VG 127 (250)
T ss_pred CEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEE----------eC
Confidence 467888877653 4666644 667788999888887665 222111 2222211 2467888888 77
Q ss_pred ccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc----CC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-
Q 019790 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL----GA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY- 230 (335)
Q Consensus 158 ~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~- 230 (335)
+|. |..++.+++ .|+ +|++++.++...+.+++. +. +.+.- .. +...||+|+.+.....
T Consensus 128 -cGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~-~~-----------~~~~fD~Vvani~~~~~ 192 (250)
T PRK00517 128 -CGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYL-PQ-----------GDLKADVIVANILANPL 192 (250)
T ss_pred -CcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-cc-----------CCCCcCEEEEcCcHHHH
Confidence 555 877776555 576 599999999888777642 22 11110 00 1115999998776543
Q ss_pred ---HHHhhccccCCCEEEEEecc
Q 019790 231 ---FQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 231 ---~~~~~~~l~~~G~~v~~g~~ 250 (335)
+..+.+.|+++|+++..|..
T Consensus 193 ~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 193 LELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHhcCCCcEEEEEECc
Confidence 35678889999999987654
No 141
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.61 E-value=0.014 Score=52.26 Aligned_cols=172 Identities=15% Similarity=0.087 Sum_probs=102.6
Q ss_pred CCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCc---------------------------ceeeEEEecCCceEe
Q 019790 55 KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG---------------------------GYAEKVAVPAGQVLP 107 (335)
Q Consensus 55 ~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g---------------------------~~~~~~~~~~~~~~~ 107 (335)
..+-.+|--.+ ++|++ +.++.+.+|.||+|+.+-+ .|.+|.++..+..+.
T Consensus 28 ~~wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~ 104 (314)
T PF11017_consen 28 DGWGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD 104 (314)
T ss_pred ccCcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC
Confidence 33444554444 67777 7888999999999986321 233343333332221
Q ss_pred CCCCCChhhhccCcchHHHHHHHHHHhc---CCCCCCEEEEeeccccccccccccchHHHHHHHHHh-hC-CCeEEEEec
Q 019790 108 VPSGVSLKDAAAFPEVACTVWSTVFMTS---HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQ-GVRVFVTAG 182 (335)
Q Consensus 108 ~p~~~~~~~aa~~~~~~~~a~~~l~~~~---~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~-~~-g~~V~~~~~ 182 (335)
- -....-+.+...+.|.|..- +.. +.-....|++ ..+++-.++.++..++ .. +.+++.++
T Consensus 105 ~---~~e~~~~LlrPLf~Tsfll~-d~l~~~~~~ga~~vvl----------~SASSKTA~glA~~L~~~~~~~~~vglT- 169 (314)
T PF11017_consen 105 P---EREDWQMLLRPLFITSFLLD-DFLFDNDFFGAAQVVL----------SSASSKTAIGLAYCLKKQRGPPKVVGLT- 169 (314)
T ss_pred c---chhHHHHHHHHHHHHHHHHH-HHhcccccCCccEEEE----------eccchHHHHHHHHHhhccCCCceEEEEe-
Confidence 1 11222344555666666432 222 1233456777 7889999999988888 33 45899988
Q ss_pred ChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCC-EEEEEeccC
Q 019790 183 SEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDG-RLFIIGTQG 251 (335)
Q Consensus 183 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G-~~v~~g~~~ 251 (335)
|+......+.+|. +.++.|++ +..+.. ..--+++|..|+..+ ...-..++..= ..+.+|...
T Consensus 170 S~~N~~Fve~lg~Yd~V~~Yd~------i~~l~~-~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 170 SARNVAFVESLGCYDEVLTYDD------IDSLDA-PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred cCcchhhhhccCCceEEeehhh------hhhccC-CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 6677778888885 56776654 333322 245789999998653 44444454432 445566443
No 142
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.54 E-value=0.0081 Score=53.80 Aligned_cols=94 Identities=21% Similarity=0.322 Sum_probs=69.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.+++| .| .|.+|.+++..++..|++|++..|++++.+.+.+.+...+ . ...+.+.. ..
T Consensus 150 ~gk~v~I----------iG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~------~~~l~~~l--~~ 209 (287)
T TIGR02853 150 HGSNVMV----------LG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P------LNKLEEKV--AE 209 (287)
T ss_pred CCCEEEE----------Ec-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c------HHHHHHHh--cc
Confidence 4678888 88 7999999999999999999999999887777766664322 1 12233333 25
Q ss_pred ccEEEeCCChhhH-HHhhccccCCCEEEEEeccCC
Q 019790 219 VDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 219 ~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~ 252 (335)
+|+||+|++...+ ...+..++++.-++.++..++
T Consensus 210 aDiVint~P~~ii~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 210 IDIVINTIPALVLTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred CCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence 8999999987643 446777888887888876543
No 143
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.46 E-value=0.00076 Score=55.99 Aligned_cols=77 Identities=27% Similarity=0.403 Sum_probs=59.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC---CEEEeCCCcc----HHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTED----FVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~----~~~~~~ 211 (335)
-|.+||| .||++++|++.++-...+|-+|++..|+++++++++.... ..+.|-.+.+ +.+.++
T Consensus 4 tgnTiLI----------TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 4 TGNTILI----------TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred cCcEEEE----------eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHH
Confidence 3689999 9999999999999999999999999999999999986432 2344444444 444444
Q ss_pred HHhCCCcccEEEeCCC
Q 019790 212 EETGGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g 227 (335)
+... -.+++++|+|
T Consensus 74 k~~P--~lNvliNNAG 87 (245)
T COG3967 74 KEYP--NLNVLINNAG 87 (245)
T ss_pred hhCC--chheeeeccc
Confidence 4433 3699999887
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.42 E-value=0.00087 Score=67.54 Aligned_cols=115 Identities=21% Similarity=0.246 Sum_probs=74.3
Q ss_pred cceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHh
Q 019790 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171 (335)
Q Consensus 92 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~ 171 (335)
.++++|..+++..++.+ +..+.+++..... ......+|+++|| +|++|.+|..+++.+.
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLV----------TGasggIG~~la~~L~ 443 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALV----------TGAAGGIGKATAKRLA 443 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEE----------ecCCCHHHHHHHHHHH
Confidence 45677887877777766 5566666651100 0122346789999 9999999999999999
Q ss_pred hCCCeEEEEecChhhHHHHHH-cCC--C---EEEeCCCcc-HHHHHHHHh-CCCcccEEEeCCC
Q 019790 172 CQGVRVFVTAGSEEKLAVCKD-LGA--D---VCINYKTED-FVARVKEET-GGKGVDVILDCMG 227 (335)
Q Consensus 172 ~~g~~V~~~~~~~~~~~~~~~-~g~--~---~~~~~~~~~-~~~~~~~~~-~~~~~d~vid~~g 227 (335)
..|++|++++++.++.+.+.+ ++. . ...|-.+.. ..+.+.+.. ..+++|++|+++|
T Consensus 444 ~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 444 AEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred HCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 999999999999887665543 332 1 122333322 222222211 1136999999998
No 145
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.36 E-value=0.00022 Score=70.29 Aligned_cols=96 Identities=19% Similarity=0.256 Sum_probs=65.7
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC---------------------hhhHHHHHHcC
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------------------EEKLAVCKDLG 194 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~---------------------~~~~~~~~~~g 194 (335)
...+|++|+| .| .|++|+++++.++.+|++|+++++. +.+.+.++++|
T Consensus 133 ~~~~g~~V~V----------IG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~G 201 (564)
T PRK12771 133 APDTGKRVAV----------IG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLG 201 (564)
T ss_pred CCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCC
Confidence 3578899999 88 6999999999999999999998742 34566777899
Q ss_pred CCEEEeCCC-ccH-HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790 195 ADVCINYKT-EDF-VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247 (335)
Q Consensus 195 ~~~~~~~~~-~~~-~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~ 247 (335)
++..++... .+. .+.+. .+||.+|+++|... ....+......|.+..+
T Consensus 202 v~~~~~~~~~~~~~~~~~~-----~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~ 252 (564)
T PRK12771 202 VEVRLGVRVGEDITLEQLE-----GEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV 252 (564)
T ss_pred CEEEeCCEECCcCCHHHHH-----hhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence 877666433 221 11211 25999999999753 23334444445544433
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.25 E-value=0.0047 Score=58.54 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=73.0
Q ss_pred HHHHHhc-CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790 129 STVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 207 (335)
Q Consensus 129 ~~l~~~~-~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 207 (335)
.++.+.. ..-.|.+++| .| .|.+|..+++.++..|++|+++.+++.+...+...|+..+ .+.
T Consensus 242 d~~~R~~~~~LaGKtVgV----------IG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~le 304 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVV----------CG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------TLE 304 (476)
T ss_pred HHHHHhcCCCcCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------cHH
Confidence 3443433 3457889999 87 7999999999999999999999877766645555565321 122
Q ss_pred HHHHHHhCCCcccEEEeCCChhhH--HHhhccccCCCEEEEEeccC
Q 019790 208 ARVKEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~ 251 (335)
+.. +..|+|+.|+|...+ ...+..|++++.++.+|...
T Consensus 305 ----ell--~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 305 ----DVV--ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred ----HHH--hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 222 258999999987653 46899999999999998664
No 147
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.24 E-value=0.0016 Score=57.02 Aligned_cols=81 Identities=23% Similarity=0.368 Sum_probs=60.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC----CC-EE--EeCCCccHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG----AD-VC--INYKTEDFVAR 209 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g----~~-~~--~~~~~~~~~~~ 209 (335)
..+.++|| +|+++++|...+..+-..|++++.+.|++++++.+.+ +. .. .+ .|..+.+-.+.
T Consensus 4 ~~~~~~lI----------TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~ 73 (265)
T COG0300 4 MKGKTALI----------TGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALER 73 (265)
T ss_pred CCCcEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHH
Confidence 45678999 9999999999999999999999999999999887753 32 11 12 34444444445
Q ss_pred HHHHhCC--CcccEEEeCCCh
Q 019790 210 VKEETGG--KGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~~~--~~~d~vid~~g~ 228 (335)
+.+.+.. ..+|+.++++|-
T Consensus 74 l~~~l~~~~~~IdvLVNNAG~ 94 (265)
T COG0300 74 LEDELKERGGPIDVLVNNAGF 94 (265)
T ss_pred HHHHHHhcCCcccEEEECCCc
Confidence 5544333 379999999983
No 148
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.24 E-value=0.0017 Score=57.29 Aligned_cols=106 Identities=25% Similarity=0.348 Sum_probs=76.2
Q ss_pred HHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---E
Q 019790 125 CTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---V 197 (335)
Q Consensus 125 ~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~ 197 (335)
..++..+.++.+++||++||= +| ++.|.+++.+|+..|++|+.++-|+++.+.+++ .|.. .
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLD----------iG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~ 125 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLD----------IG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVE 125 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEE----------eC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccE
Confidence 456666778899999999999 87 778999999999999999999999998877754 4433 1
Q ss_pred EEeCCCccHHHHHHHHhCCCcccEEE-----eCCChh----hHHHhhccccCCCEEEEEeccC
Q 019790 198 CINYKTEDFVARVKEETGGKGVDVIL-----DCMGAS----YFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~d~vi-----d~~g~~----~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
+.-.+-.+ .. ..||-|+ +.+|.+ .+..+.+.|+++|++.+.....
T Consensus 126 v~l~d~rd-------~~--e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 126 VRLQDYRD-------FE--EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred EEeccccc-------cc--cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 21111111 11 1377775 456652 3577889999999997665433
No 149
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.15 E-value=0.0031 Score=57.24 Aligned_cols=107 Identities=19% Similarity=0.325 Sum_probs=73.8
Q ss_pred ceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC---CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEE
Q 019790 104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFV 179 (335)
Q Consensus 104 ~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~---~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~ 179 (335)
..+++|+.+..+.++.. .+...+++++...... .++.+|+| .| +|.+|..+++.++..|+ +|++
T Consensus 140 ~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~V----------iG-aG~iG~~~a~~L~~~g~~~V~v 207 (311)
T cd05213 140 KAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLV----------IG-AGEMGELAAKHLAAKGVAEITI 207 (311)
T ss_pred HHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEE----------EC-cHHHHHHHHHHHHHcCCCEEEE
Confidence 45677888888877643 4566666666333221 46889999 88 69999999999998875 7999
Q ss_pred EecChhhH-HHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790 180 TAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231 (335)
Q Consensus 180 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 231 (335)
+.++.++. +.++++|.. +.+. +.+.+.. ..+|+||.|+++...
T Consensus 208 ~~r~~~ra~~la~~~g~~-~~~~------~~~~~~l--~~aDvVi~at~~~~~ 251 (311)
T cd05213 208 ANRTYERAEELAKELGGN-AVPL------DELLELL--NEADVVISATGAPHY 251 (311)
T ss_pred EeCCHHHHHHHHHHcCCe-EEeH------HHHHHHH--hcCCEEEECCCCCch
Confidence 99998765 455677763 2321 1222222 248999999998654
No 150
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.13 E-value=0.0066 Score=50.24 Aligned_cols=90 Identities=18% Similarity=0.187 Sum_probs=63.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-----hh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-----SY 230 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-----~~ 230 (335)
.|++|.+|..+++.+...|.+|++++|++++.+. ..+.. ++..+-.+. +.+.+... ++|.||.++|. ..
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~-~~~~~al~--~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDP-DSVKAALK--GADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCH-HHHHHHHT--TSSEEEECCHSTTTHHHH
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhh-hhhhhhhh--hcchhhhhhhhhcccccc
Confidence 8999999999999999999999999999998776 33333 333333332 44555554 69999999983 23
Q ss_pred HHHhhccccCC--CEEEEEeccC
Q 019790 231 FQRNLGSLNID--GRLFIIGTQG 251 (335)
Q Consensus 231 ~~~~~~~l~~~--G~~v~~g~~~ 251 (335)
....++.++.. .+++.++...
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccceeeeccc
Confidence 44455555443 3788776554
No 151
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.12 E-value=0.0059 Score=52.78 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=66.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc---CCCEEE--eCCCcc-HHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCI--NYKTED-FVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~---g~~~~~--~~~~~~-~~~~~~ 211 (335)
.+++++| +|++|.+|..+++.+...|++|+++++++++.+.+. +. +.-..+ |..+.. ..+.+.
T Consensus 4 ~~~~vlI----------tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 73 (238)
T PRK05786 4 KGKKVAI----------IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIE 73 (238)
T ss_pred CCcEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHH
Confidence 4678999 999999999999999999999999999988776552 22 221222 222222 211111
Q ss_pred HHhC-CCcccEEEeCCChhh------------------------HHHhhccccCCCEEEEEeccC
Q 019790 212 EETG-GKGVDVILDCMGASY------------------------FQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 212 ~~~~-~~~~d~vid~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~ 251 (335)
+... ..++|.++.+.+... ++..++.++++|+++.++...
T Consensus 74 ~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 74 KAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred HHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 1110 135899998887311 233445566788999887654
No 152
>PRK12742 oxidoreductase; Provisional
Probab=97.08 E-value=0.0091 Score=51.55 Aligned_cols=101 Identities=25% Similarity=0.406 Sum_probs=63.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH-HHcCCCEE-EeCCCcc-HHHHHHHHh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KDLGADVC-INYKTED-FVARVKEET 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~-~~~~~~~~~ 214 (335)
.+.++|| +|++|.+|..+++.+...|++|+.+.+ ++++.+.+ .+.+...+ .|..+.. +.+.+. ..
T Consensus 5 ~~k~vlI----------tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~-~~ 73 (237)
T PRK12742 5 TGKKVLV----------LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVR-KS 73 (237)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHH-Hh
Confidence 4678999 999999999999999999999988765 44444444 34454332 2332322 222222 21
Q ss_pred CCCcccEEEeCCChhh-----------H---------------HHhhccccCCCEEEEEeccCC
Q 019790 215 GGKGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 215 ~~~~~d~vid~~g~~~-----------~---------------~~~~~~l~~~G~~v~~g~~~~ 252 (335)
.++|++|+++|... + ......++..|+++.++....
T Consensus 74 --~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 74 --GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred --CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 36899999886410 0 123344566789998876543
No 153
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.07 E-value=0.0039 Score=53.44 Aligned_cols=79 Identities=24% Similarity=0.414 Sum_probs=57.5
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC----CEEEeCCCc-cHHHHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA----DVCINYKTE-DFVARVKEE 213 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~----~~~~~~~~~-~~~~~~~~~ 213 (335)
+..++| +|+++++|.+.++.+...|++|+.+.|..++++.+. +++. ...+|-.+. ...+.+...
T Consensus 6 ~kv~lI----------TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~ 75 (246)
T COG4221 6 GKVALI----------TGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEAL 75 (246)
T ss_pred CcEEEE----------ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHH
Confidence 467899 999999999999999999999999999999998886 4662 123344443 222223322
Q ss_pred hCC-CcccEEEeCCCh
Q 019790 214 TGG-KGVDVILDCMGA 228 (335)
Q Consensus 214 ~~~-~~~d~vid~~g~ 228 (335)
... +.+|++++++|-
T Consensus 76 ~~~~g~iDiLvNNAGl 91 (246)
T COG4221 76 PEEFGRIDILVNNAGL 91 (246)
T ss_pred HHhhCcccEEEecCCC
Confidence 221 369999999984
No 154
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.99 E-value=0.0059 Score=57.01 Aligned_cols=111 Identities=22% Similarity=0.312 Sum_probs=75.4
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+..+....+..+.+..+++++++||. +| .+.|..+..+++..|++|++++.+++..+.+++......+
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLD----------IG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v 215 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLD----------IG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPV 215 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEE----------eC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeE
Confidence 33344555666667778899999999 87 4678888899998899999999999999888764322111
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEe-----CCCh----hhHHHhhccccCCCEEEEEe
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILD-----CMGA----SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g 248 (335)
.....++ .+. ...||.|+. .+|. ..+..+.+.|+|+|+++...
T Consensus 216 ~~~~~D~----~~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 216 EIRLQDY----RDL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred EEEECch----hhc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1111122 111 236999874 3343 23577888999999998653
No 155
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.054 Score=47.41 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=51.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHH----HHHcCCCE---EEeCCCccHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAV----CKDLGADV---CINYKTEDFVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~----~~~~g~~~---~~~~~~~~~~~~~ 210 (335)
.+.+++| .|+++.+|..+++.+...|++ |+++.++.+..+. ++..+... ..|..+.+...++
T Consensus 5 ~~k~vlI----------tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (260)
T PRK06198 5 DGKVALV----------TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRV 74 (260)
T ss_pred CCcEEEE----------eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 4578999 999999999999999999998 9999988665442 22334322 2244333222222
Q ss_pred HHHhC--CCcccEEEeCCCh
Q 019790 211 KEETG--GKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~--~~~~d~vid~~g~ 228 (335)
.+... -.++|.+|.+.|.
T Consensus 75 ~~~~~~~~g~id~li~~ag~ 94 (260)
T PRK06198 75 VAAADEAFGRLDALVNAAGL 94 (260)
T ss_pred HHHHHHHhCCCCEEEECCCc
Confidence 22110 1268999999874
No 156
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.87 E-value=0.00076 Score=59.88 Aligned_cols=100 Identities=26% Similarity=0.400 Sum_probs=63.1
Q ss_pred HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--CEEEeC
Q 019790 128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DVCINY 201 (335)
Q Consensus 128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~~~~~~ 201 (335)
+..+.+..++++|++||- +| ++.|..+..+++..|++|+.++.++++.+.+++ .|. ...+..
T Consensus 51 ~~~~~~~~~l~~G~~vLD----------iG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~ 118 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLD----------IG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRL 118 (273)
T ss_dssp HHHHHTTTT--TT-EEEE----------ES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE
T ss_pred HHHHHHHhCCCCCCEEEE----------eC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 344557889999999999 87 558999999999999999999999999888753 442 121211
Q ss_pred CCccHHHHHHHHhCCCcccEEEe-----CCChh----hHHHhhccccCCCEEEEE
Q 019790 202 KTEDFVARVKEETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~ 247 (335)
. ++ ++... +||.|+. .+|.. .+..+.+.|+|+|++++-
T Consensus 119 ~--D~----~~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 119 Q--DY----RDLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp S---G----GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred e--ec----cccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 11 22221 7998864 55543 257788999999999754
No 157
>PRK06182 short chain dehydrogenase; Validated
Probab=96.84 E-value=0.015 Score=51.58 Aligned_cols=80 Identities=26% Similarity=0.309 Sum_probs=55.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccH-HHHHHHHh-C
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDF-VARVKEET-G 215 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~~~~~-~ 215 (335)
++.+++| +|++|.+|..+++.+...|++|+++++++++.+.+...+... ..|-.+... ...+.+.. .
T Consensus 2 ~~k~vlI----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 71 (273)
T PRK06182 2 QKKVALV----------TGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAE 71 (273)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHh
Confidence 3568899 999999999999999889999999999988777665544433 234444322 22222211 1
Q ss_pred CCcccEEEeCCCh
Q 019790 216 GKGVDVILDCMGA 228 (335)
Q Consensus 216 ~~~~d~vid~~g~ 228 (335)
..++|++|+++|.
T Consensus 72 ~~~id~li~~ag~ 84 (273)
T PRK06182 72 EGRIDVLVNNAGY 84 (273)
T ss_pred cCCCCEEEECCCc
Confidence 2368999999873
No 158
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.01 Score=52.70 Aligned_cols=76 Identities=29% Similarity=0.408 Sum_probs=54.0
Q ss_pred EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHh--CCCc
Q 019790 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKG 218 (335)
Q Consensus 142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~ 218 (335)
++|| +|++|.+|..+++.+...|++|++++++.++.+.+...+...+ .|..+....+.+.+.. ...+
T Consensus 3 ~vlI----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 3 VVLI----------TGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred EEEE----------ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 6888 9999999999999999999999999999887776665554332 3544433222222211 1236
Q ss_pred ccEEEeCCC
Q 019790 219 VDVILDCMG 227 (335)
Q Consensus 219 ~d~vid~~g 227 (335)
+|++|+++|
T Consensus 73 id~vi~~ag 81 (274)
T PRK05693 73 LDVLINNAG 81 (274)
T ss_pred CCEEEECCC
Confidence 899999998
No 159
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.81 E-value=0.0089 Score=53.64 Aligned_cols=145 Identities=11% Similarity=0.063 Sum_probs=79.9
Q ss_pred CCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHH--HHHHHhcCCCCCCEEEEeecccccccc
Q 019790 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVDFCSISYSDV 155 (335)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~--~~l~~~~~~~~~~~vli~~~~~~~~~~ 155 (335)
.+.+|++.+.... |.++..-+....+.+.+++.+..+. ...|.. ..+.. ...++++||-
T Consensus 105 p~~~g~~~~i~p~---w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l~l~~l~~--~~~~g~~VLD---------- 165 (288)
T TIGR00406 105 PVQFGKRFWICPS---WRDVPSDEDALIIMLDPGLAFGTGT----HPTTSLCLEWLED--LDLKDKNVID---------- 165 (288)
T ss_pred CEEEcCeEEEECC---CcCCCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHh--hcCCCCEEEE----------
Confidence 3667776655532 3222111233445555554443322 222222 12211 2356788888
Q ss_pred ccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc----CCC-EEEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790 156 HGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 229 (335)
.| +|. |..++.+++ +|+ +|++++.++...+.+++. +.. .+.... .+ ..... ..+||+|+.+....
T Consensus 166 vG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~----~~~~~-~~~fDlVvan~~~~ 236 (288)
T TIGR00406 166 VG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IY----LEQPI-EGKADVIVANILAE 236 (288)
T ss_pred eC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-cc----ccccc-CCCceEEEEecCHH
Confidence 77 455 877777766 465 899999998877776542 211 111111 10 11111 24799999876544
Q ss_pred h----HHHhhccccCCCEEEEEecc
Q 019790 230 Y----FQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 230 ~----~~~~~~~l~~~G~~v~~g~~ 250 (335)
. +..+.+.|+++|.++..|..
T Consensus 237 ~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 237 VIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 2 35678899999999887643
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.011 Score=52.55 Aligned_cols=78 Identities=29% Similarity=0.464 Sum_probs=55.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHH-HHHH---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFV-ARVK---EE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~-~~~~---~~ 213 (335)
.+.++|| +|++|.+|.++++.+...|++|++++++++..+.+.+.+...+ .|..+.... ..+. +.
T Consensus 3 ~~k~vlI----------tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 72 (277)
T PRK05993 3 MKRSILI----------TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLEL 72 (277)
T ss_pred CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999 9999999999999998899999999999888877766554432 344443222 2222 22
Q ss_pred hCCCcccEEEeCCC
Q 019790 214 TGGKGVDVILDCMG 227 (335)
Q Consensus 214 ~~~~~~d~vid~~g 227 (335)
.+ ..+|++++++|
T Consensus 73 ~~-g~id~li~~Ag 85 (277)
T PRK05993 73 SG-GRLDALFNNGA 85 (277)
T ss_pred cC-CCccEEEECCC
Confidence 22 36899999876
No 161
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.015 Score=50.48 Aligned_cols=78 Identities=24% Similarity=0.368 Sum_probs=54.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE-EeCCCccHHHHHHHHhCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGG 216 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~ 216 (335)
.+.+++| .|++|.+|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+......+.+. .
T Consensus 8 ~~~~~lI----------tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~ 75 (245)
T PRK07060 8 SGKSVLV----------TGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--A 75 (245)
T ss_pred CCCEEEE----------eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--h
Confidence 4578999 9999999999999999999999999998877665543 343322 233332222222222 2
Q ss_pred CcccEEEeCCCh
Q 019790 217 KGVDVILDCMGA 228 (335)
Q Consensus 217 ~~~d~vid~~g~ 228 (335)
.++|++|.+.|.
T Consensus 76 ~~~d~vi~~ag~ 87 (245)
T PRK07060 76 GAFDGLVNCAGI 87 (245)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 162
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.73 E-value=0.0035 Score=60.01 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=65.6
Q ss_pred HhcCCCCCCEEE----EeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHH
Q 019790 133 MTSHLSPGESFL----VDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFV 207 (335)
Q Consensus 133 ~~~~~~~~~~vl----i~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~ 207 (335)
...++++|+++| + ++++|++|.+++++++..|++|+.+.+.+.+....+..+.+ .++|.+...+.
T Consensus 27 ~l~~~~~~~~~~~~~~l----------~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVL----------VGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDP 96 (450)
T ss_pred cccCCCCCCCCCCCceE----------EccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCH
Confidence 445678899888 8 88899999999999999999999988665533333333333 35555544444
Q ss_pred HHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCC
Q 019790 208 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 252 (335)
+.+.... ..+...++.|.++|+++.++....
T Consensus 97 ~~l~~~~--------------~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 97 ADLKALY--------------EFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred HHHHHHH--------------HHHHHHHHhccCCCEEEEEccccc
Confidence 4443321 234566788888999998876543
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0096 Score=54.55 Aligned_cols=79 Identities=29% Similarity=0.449 Sum_probs=54.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~ 211 (335)
.+.++|| +|+++++|.++++.+...|++|+++.+++++.+.+ ++.+.... .|-.+.+..+.+.
T Consensus 6 ~~k~vlI----------TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 75 (330)
T PRK06139 6 HGAVVVI----------TGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALA 75 (330)
T ss_pred CCCEEEE----------cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence 4678999 99999999999999999999999999998876544 33454332 2333322222222
Q ss_pred HHh--CCCcccEEEeCCC
Q 019790 212 EET--GGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~--~~~~~d~vid~~g 227 (335)
+.. ...++|++|+|+|
T Consensus 76 ~~~~~~~g~iD~lVnnAG 93 (330)
T PRK06139 76 TQAASFGGRIDVWVNNVG 93 (330)
T ss_pred HHHHHhcCCCCEEEECCC
Confidence 111 1136999999987
No 164
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.68 E-value=0.019 Score=55.90 Aligned_cols=83 Identities=17% Similarity=0.251 Sum_probs=57.0
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--------CC-----CEE
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--------GA-----DVC 198 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--------g~-----~~~ 198 (335)
...+.+.|.++|| .||+|.+|..+++.+...|++|++++|+.++.+.+.+ + |. -.+
T Consensus 73 ~~~~~~~gKvVLV----------TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~i 142 (576)
T PLN03209 73 KELDTKDEDLAFV----------AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEI 142 (576)
T ss_pred cccccCCCCEEEE----------ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEE
Confidence 3456678899999 9999999999999999899999999999887654422 1 11 111
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+..+-.+ .+.+.+..+ ++|+||.|+|.
T Consensus 143 V~gDLtD-~esI~~aLg--giDiVVn~AG~ 169 (576)
T PLN03209 143 VECDLEK-PDQIGPALG--NASVVICCIGA 169 (576)
T ss_pred EEecCCC-HHHHHHHhc--CCCEEEEcccc
Confidence 2111122 233444443 58999999875
No 165
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.63 E-value=0.03 Score=45.25 Aligned_cols=110 Identities=16% Similarity=0.188 Sum_probs=69.1
Q ss_pred HHHHHHhc-CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790 128 WSTVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206 (335)
Q Consensus 128 ~~~l~~~~-~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 206 (335)
+.++.+.. -.-.|.+++| .| -|.+|.-.++.++.+|++|++++.++-+.-++..-|....
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV----------~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-------- 70 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVV----------IG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-------- 70 (162)
T ss_dssp HHHHHHHH-S--TTSEEEE----------E---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE--------
T ss_pred HHHHHhcCceeeCCCEEEE----------eC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec--------
Confidence 33443343 3457888888 77 8999999999999999999999999988777776676432
Q ss_pred HHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCCCEEEEEeccCCCccccChhHHh
Q 019790 207 VARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF 263 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 263 (335)
.+.+.. ...|++|.++|... ..+-++.|+++--+..+|... .+++...+.
T Consensus 71 --~~~~a~--~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d---~Eid~~~L~ 122 (162)
T PF00670_consen 71 --TLEEAL--RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFD---VEIDVDALE 122 (162)
T ss_dssp ---HHHHT--TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST---TSBTHHHHH
T ss_pred --CHHHHH--hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCc---eeEeecccc
Confidence 122333 25799999999865 356678888777666665433 345554443
No 166
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.57 E-value=0.0097 Score=46.94 Aligned_cols=73 Identities=15% Similarity=0.260 Sum_probs=51.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCCC--EEEeCCCccHHHHHHHHh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEET 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~ 214 (335)
.+.+++| .| +|.+|.+++..+...|+ +|+++.|+.++.+.+. .++.. ...+..+. . +..
T Consensus 11 ~~~~vlv----------iG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~--~----~~~ 73 (135)
T PF01488_consen 11 KGKRVLV----------IG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL--E----EAL 73 (135)
T ss_dssp TTSEEEE----------ES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH--C----HHH
T ss_pred CCCEEEE----------EC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH--H----HHH
Confidence 4678888 88 69999999999999999 5999999998877765 45322 23333221 1 111
Q ss_pred CCCcccEEEeCCChhh
Q 019790 215 GGKGVDVILDCMGASY 230 (335)
Q Consensus 215 ~~~~~d~vid~~g~~~ 230 (335)
..+|+||+|++...
T Consensus 74 --~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 74 --QEADIVINATPSGM 87 (135)
T ss_dssp --HTESEEEE-SSTTS
T ss_pred --hhCCeEEEecCCCC
Confidence 25999999998753
No 167
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.028 Score=49.51 Aligned_cols=78 Identities=19% Similarity=0.266 Sum_probs=52.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCcc-HHH---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTED-FVA---RV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~-~~~---~~ 210 (335)
.+.++|| .|+++.+|.+++..+...|++|++++++.++.+.+. +++... . .|..+.. +.+ .+
T Consensus 5 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 5 AGKVAIV----------TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATV 74 (261)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHH
Confidence 3578999 999999999999999999999999999887655543 344321 1 2333322 222 22
Q ss_pred HHHhCCCcccEEEeCCCh
Q 019790 211 KEETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~ 228 (335)
.+.. .++|+++.++|.
T Consensus 75 ~~~~--g~id~lv~~ag~ 90 (261)
T PRK08265 75 VARF--GRVDILVNLACT 90 (261)
T ss_pred HHHh--CCCCEEEECCCC
Confidence 2222 368999998873
No 168
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.028 Score=48.80 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=52.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~ 211 (335)
++.+++| +|++|.+|..++..+...|++|+++.+++++.+... ..+... .+ |-.+......+.
T Consensus 6 ~~~~vlI----------tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (250)
T PRK12939 6 AGKRALV----------TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFF 75 (250)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 4678999 999999999999999999999999998877655442 223222 22 333322222222
Q ss_pred HHh--CCCcccEEEeCCCh
Q 019790 212 EET--GGKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~--~~~~~d~vid~~g~ 228 (335)
+.. ...++|++|.++|.
T Consensus 76 ~~~~~~~~~id~vi~~ag~ 94 (250)
T PRK12939 76 DAAAAALGGLDGLVNNAGI 94 (250)
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 211 11369999999874
No 169
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=96.52 E-value=0.048 Score=46.00 Aligned_cols=99 Identities=15% Similarity=0.243 Sum_probs=65.4
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHH----HcC-CCEEEeCCCcc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLG-ADVCINYKTED 205 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~ 205 (335)
...++.+++++|. .| +|. |..++.+++..+ .+|++++.+++..+.++ .++ .+.+... ..+
T Consensus 34 ~~l~~~~~~~vlD----------lG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~-~~d 100 (198)
T PRK00377 34 SKLRLRKGDMILD----------IG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLI-KGE 100 (198)
T ss_pred HHcCCCCcCEEEE----------eC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEE-Eec
Confidence 4567889999998 77 555 888888888764 58999999988877654 345 2222111 112
Q ss_pred HHHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790 206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 246 (335)
..+.+.. .. ..||.||...+. ..+..+.+.|+++|+++.
T Consensus 101 ~~~~l~~-~~-~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 101 APEILFT-IN-EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred hhhhHhh-cC-CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 2222222 22 369999986553 235677889999999975
No 170
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.039 Score=47.93 Aligned_cols=101 Identities=19% Similarity=0.289 Sum_probs=60.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHH----HHcCCCE-E--EeCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVC----KDLGADV-C--INYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~----~~~g~~~-~--~~~~~~~-~~~~ 209 (335)
.+.++|| +|++|.+|..++..+...|++|+++.++.. +.+.+ +..+... . .|..+.+ ....
T Consensus 5 ~~k~vlI----------tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (248)
T PRK07806 5 PGKTALV----------TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAAL 74 (248)
T ss_pred CCcEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 3568999 999999999999999889999999888643 22222 2223222 1 2333322 2222
Q ss_pred HHHHhC-CCcccEEEeCCChh--------------------hHHHhhccccCCCEEEEEec
Q 019790 210 VKEETG-GKGVDVILDCMGAS--------------------YFQRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 210 ~~~~~~-~~~~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 249 (335)
+.+... ..++|+++.++|.. .+..+.+.+..+|+++.++.
T Consensus 75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 75 MDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred HHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 222111 13589999877532 12334455556789988865
No 171
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.017 Score=49.55 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=50.7
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
.|++|.+|...+..+...|++|+++++++++.+.+++++.... .|-.+....+.+.+...+.++|++|.++|.
T Consensus 7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 9999999999999888899999999998877666655432222 233333333344444444579999988753
No 172
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.46 E-value=0.015 Score=55.24 Aligned_cols=143 Identities=15% Similarity=0.244 Sum_probs=90.0
Q ss_pred CCCCCceEEEEEEecCCCCCCCCCCEE-EEec----------------CCcceeeEEEecCCceEeCCCCCChhhhccCc
Q 019790 59 PYPGLECSGTILSVGKNVSRWKVGDQV-CALL----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121 (335)
Q Consensus 59 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V-~~~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~ 121 (335)
..-|+|+++-+.+|+++.+..-+|+.= ++-+ .++.|++. ++.|+.+..+.+ ...
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~ 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGA 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCC
Confidence 346999999999999988765555542 1111 11223332 333443333322 233
Q ss_pred chHHHHHHHHHHhcC---CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHH-HHHHcCCC
Q 019790 122 EVACTVWSTVFMTSH---LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGAD 196 (335)
Q Consensus 122 ~~~~~a~~~l~~~~~---~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~-~~~~~g~~ 196 (335)
.+.+.+++++..... -.++.+++| .| +|.+|.++++.++..|+ +|+++.++.++.+ .++.+|..
T Consensus 161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlV----------iG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~ 229 (423)
T PRK00045 161 GAVSVASAAVELAKQIFGDLSGKKVLV----------IG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE 229 (423)
T ss_pred CCcCHHHHHHHHHHHhhCCccCCEEEE----------EC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc
Confidence 355566666633322 256789999 87 79999999999999998 8999999988765 45567753
Q ss_pred EEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 197 VCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
+++. ..+.+.. .++|+||+|+|+..
T Consensus 230 -~~~~------~~~~~~l--~~aDvVI~aT~s~~ 254 (423)
T PRK00045 230 -AIPL------DELPEAL--AEADIVISSTGAPH 254 (423)
T ss_pred -EeeH------HHHHHHh--ccCCEEEECCCCCC
Confidence 2221 1222222 25899999999753
No 173
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.42 E-value=0.04 Score=48.83 Aligned_cols=103 Identities=23% Similarity=0.357 Sum_probs=68.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-EE----eCCCcc-HHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI----NYKTED-FVA 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~~----~~~~~~-~~~ 208 (335)
.+..|+| +|+++++|.+++.-+-..|++++.+.+..++++.+ ++.+... ++ |-.+.+ ...
T Consensus 11 ~~kvVvI----------TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~ 80 (282)
T KOG1205|consen 11 AGKVVLI----------TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKK 80 (282)
T ss_pred CCCEEEE----------eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHH
Confidence 4678999 99999999998888888899999998888877666 3333322 21 222222 221
Q ss_pred ---HHHHHhCCCcccEEEeCCChh--------------------------hHHHhhccccCC--CEEEEEeccCCC
Q 019790 209 ---RVKEETGGKGVDVILDCMGAS--------------------------YFQRNLGSLNID--GRLFIIGTQGGA 253 (335)
Q Consensus 209 ---~~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~ 253 (335)
.+.... +++|+.++++|-. ....+++.|++. |+|+.+++..+.
T Consensus 81 ~~~~~~~~f--g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 81 FVEWAIRHF--GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred HHHHHHHhc--CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 222222 4799999988732 013456666543 999999877764
No 174
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.39 E-value=0.0078 Score=51.43 Aligned_cols=97 Identities=21% Similarity=0.125 Sum_probs=65.0
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTE 204 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~ 204 (335)
....++++++||- .| ++.|..+..+++..+ .+|+.++.+++..+.+++ .+... +...+..
T Consensus 70 ~~l~~~~g~~VLd----------IG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~ 137 (212)
T PRK13942 70 ELLDLKEGMKVLE----------IG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT 137 (212)
T ss_pred HHcCCCCcCEEEE----------EC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence 5567889999999 77 556778888888765 589999999887776653 34322 2222211
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEE
Q 019790 205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 247 (335)
. ......+||.|+-..... .....++.|+++|+++..
T Consensus 138 ~------~~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 138 L------GYEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred c------CCCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 1 011235799997654433 346678899999998765
No 175
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.04 Score=50.59 Aligned_cols=78 Identities=19% Similarity=0.272 Sum_probs=53.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccHHHHH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV- 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~- 210 (335)
.+.+++| +|+++.+|.++++.+...|++|+++++++++.+.+. +.+.... .|..+....+.+
T Consensus 7 ~~k~vlI----------TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~ 76 (334)
T PRK07109 7 GRQVVVI----------TGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAA 76 (334)
T ss_pred CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHH
Confidence 4568999 999999999999999999999999999887665442 3444332 233332222222
Q ss_pred ---HHHhCCCcccEEEeCCCh
Q 019790 211 ---KEETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ---~~~~~~~~~d~vid~~g~ 228 (335)
.+.. .++|++|+++|.
T Consensus 77 ~~~~~~~--g~iD~lInnAg~ 95 (334)
T PRK07109 77 DRAEEEL--GPIDTWVNNAMV 95 (334)
T ss_pred HHHHHHC--CCCCEEEECCCc
Confidence 2222 368999999874
No 176
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.30 E-value=0.023 Score=42.77 Aligned_cols=92 Identities=24% Similarity=0.300 Sum_probs=60.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHh-hCCCeEEEEecChhhHHHHHHc----C--CCEEEeCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDL----G--ADVCINYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~-~~g~~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~~ 211 (335)
|+.+||- .| .+.|..+..+++ ..+++|++++.+++..+.+++. + ....+-.. ++ . .
T Consensus 1 p~~~vLD----------lG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~--d~-~--~ 63 (112)
T PF12847_consen 1 PGGRVLD----------LG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG--DA-E--F 63 (112)
T ss_dssp TTCEEEE----------ET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES--CC-H--G
T ss_pred CCCEEEE----------Ec--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC--cc-c--c
Confidence 5677877 76 456888888888 4689999999999988877642 1 22222222 11 1 1
Q ss_pred HHhCCCcccEEEeCC-Chh----------hHHHhhccccCCCEEEEE
Q 019790 212 EETGGKGVDVILDCM-GAS----------YFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 212 ~~~~~~~~d~vid~~-g~~----------~~~~~~~~l~~~G~~v~~ 247 (335)
......+||+|+... ... .+..+.+.|+|+|+++.-
T Consensus 64 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 64 DPDFLEPFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GTTTSSCEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccCCCCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 122234699999877 221 156778899999998753
No 177
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.024 Score=49.69 Aligned_cols=81 Identities=30% Similarity=0.333 Sum_probs=54.7
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC--E--EEeCCCccHH---
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--V--CINYKTEDFV--- 207 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~--~--~~~~~~~~~~--- 207 (335)
...++.++|| .|++|.+|..++..+...|++|+++.++++..+.+.+ .... . ..|..+....
T Consensus 7 ~~~~~~~vlI----------tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (264)
T PRK12829 7 KPLDGLRVLV----------TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERV 76 (264)
T ss_pred hccCCCEEEE----------eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHH
Confidence 3356789999 9999999999999999999999999998776665543 2211 1 1233332211
Q ss_pred -HHHHHHhCCCcccEEEeCCCh
Q 019790 208 -ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 -~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|.||.++|.
T Consensus 77 ~~~~~~~~--~~~d~vi~~ag~ 96 (264)
T PRK12829 77 FDTAVERF--GGLDVLVNNAGI 96 (264)
T ss_pred HHHHHHHh--CCCCEEEECCCC
Confidence 1222222 368999998874
No 178
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.025 Score=50.89 Aligned_cols=78 Identities=23% Similarity=0.365 Sum_probs=54.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--CEE---EeCCCcc-H---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC---INYKTED-F---VA 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~~~---~~~~~~~-~---~~ 208 (335)
++.++|| +|+++++|.++++.+...|++|+++++++++.+.+. +++. ... .|-.+.. . .+
T Consensus 8 ~gk~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~ 77 (296)
T PRK05872 8 AGKVVVV----------TGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAE 77 (296)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHH
Confidence 4678999 999999999999999999999999999988766553 3432 111 2333322 1 12
Q ss_pred HHHHHhCCCcccEEEeCCCh
Q 019790 209 RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|++|+++|.
T Consensus 78 ~~~~~~--g~id~vI~nAG~ 95 (296)
T PRK05872 78 EAVERF--GGIDVVVANAGI 95 (296)
T ss_pred HHHHHc--CCCCEEEECCCc
Confidence 222222 369999999984
No 179
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.041 Score=47.04 Aligned_cols=73 Identities=27% Similarity=0.377 Sum_probs=50.8
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+|++|.+|..+++.+...|++|++++++.+..+.++..+... ..|-.+....+.+.+...+.++|+++.+.|.
T Consensus 7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 7 VGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 999999999999988888999999999888777766555432 2333333322333333334479999998764
No 180
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.17 E-value=0.039 Score=49.01 Aligned_cols=92 Identities=18% Similarity=0.257 Sum_probs=66.7
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCC---Chh--
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCM---GAS-- 229 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~---g~~-- 229 (335)
+| .|.+|.-++.+|..+|++|++.+.|..|++.+..+-..++ .-+.+. ..+.+.. +..|++|.++ |.+
T Consensus 174 iG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v--~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 174 LG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAV--KKADLVIGAVLIPGAKAP 247 (371)
T ss_pred EC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHh--hhccEEEEEEEecCCCCc
Confidence 45 5999999999999999999999999999999986443332 222322 2333332 3589999865 222
Q ss_pred --hHHHhhccccCCCEEEEEeccCCC
Q 019790 230 --YFQRNLGSLNIDGRLFIIGTQGGA 253 (335)
Q Consensus 230 --~~~~~~~~l~~~G~~v~~g~~~~~ 253 (335)
.+++.+..|++++.++.+....+.
T Consensus 248 kLvt~e~vk~MkpGsVivDVAiDqGG 273 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAIDQGG 273 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEEcCCC
Confidence 257789999999999988665554
No 181
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.16 E-value=0.031 Score=50.95 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=55.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCCCE----EEeCCC--ccHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADV----CINYKT--EDFV 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~~~----~~~~~~--~~~~ 207 (335)
.|.+++| +|+++++|.+.+..+...|++|++++|++++.+.+.+ .+... ..|-.+ .+..
T Consensus 52 ~g~~~lI----------TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~ 121 (320)
T PLN02780 52 YGSWALV----------TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGV 121 (320)
T ss_pred cCCEEEE----------eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHH
Confidence 5789999 9999999999999888889999999999887765432 11111 224332 2233
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+..++..+|++++++|
T Consensus 122 ~~l~~~~~~~didilVnnAG 141 (320)
T PLN02780 122 KRIKETIEGLDVGVLINNVG 141 (320)
T ss_pred HHHHHHhcCCCccEEEEecC
Confidence 45555555445679999876
No 182
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.16 E-value=0.032 Score=49.06 Aligned_cols=79 Identities=27% Similarity=0.350 Sum_probs=52.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-CCCE-EE--eCCCcc-HHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADV-CI--NYKTED-FVARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-g~~~-~~--~~~~~~-~~~~~~~~ 213 (335)
.+.+++| .|+++.+|.++++.+...|++|+++.++.++.+.+.+. +... .+ |-.+.. ..+.+.+.
T Consensus 4 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (262)
T TIGR03325 4 KGEVVLV----------TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARC 73 (262)
T ss_pred CCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHH
Confidence 4678999 99999999999999999999999999988777666543 3221 12 332221 22222221
Q ss_pred hC-CCcccEEEeCCC
Q 019790 214 TG-GKGVDVILDCMG 227 (335)
Q Consensus 214 ~~-~~~~d~vid~~g 227 (335)
.. -.++|+++.+.|
T Consensus 74 ~~~~g~id~li~~Ag 88 (262)
T TIGR03325 74 VAAFGKIDCLIPNAG 88 (262)
T ss_pred HHHhCCCCEEEECCC
Confidence 11 136899999886
No 183
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.16 E-value=0.15 Score=42.52 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=60.4
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARV 210 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~ 210 (335)
...++++++||. .| +|+-+. +..+++.. ..+|++++.++.. ...+...+ .|..+....+.+
T Consensus 27 ~~~i~~g~~VLD----------iG-~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l 90 (188)
T TIGR00438 27 FKLIKPGDTVLD----------LG-AAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKI 90 (188)
T ss_pred hcccCCCCEEEE----------ec-CCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHH
Confidence 456689999999 87 444444 44444443 3489999988754 11233222 233333334455
Q ss_pred HHHhCCCcccEEEe-CC----Ch-------------hhHHHhhccccCCCEEEEEe
Q 019790 211 KEETGGKGVDVILD-CM----GA-------------SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 211 ~~~~~~~~~d~vid-~~----g~-------------~~~~~~~~~l~~~G~~v~~g 248 (335)
.+.....++|+|+. .. |. ..+..+.+.|+++|+++...
T Consensus 91 ~~~~~~~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 91 RERVGDDKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred HHHhCCCCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 56666668999995 21 21 23566788999999998754
No 184
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.12 E-value=0.043 Score=46.60 Aligned_cols=97 Identities=20% Similarity=0.116 Sum_probs=63.7
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC---EEEeCCC
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD---VCINYKT 203 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~ 203 (335)
....+.++++||- .| ++.|..+..+++..+ .+|+.++.+++..+.+++ .+.. .++..+.
T Consensus 66 ~~l~~~~~~~VLD----------iG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~ 133 (205)
T PRK13944 66 ELIEPRPGMKILE----------VG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG 133 (205)
T ss_pred HhcCCCCCCEEEE----------EC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc
Confidence 5566788899888 77 456777777787764 589999999887666543 3422 2222221
Q ss_pred ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790 204 EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247 (335)
Q Consensus 204 ~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~ 247 (335)
.. .+ ....+||.|+-+..... .....+.|+++|+++..
T Consensus 134 ~~---~~---~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 134 KR---GL---EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred cc---CC---ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 11 11 11247999987766544 35678999999999764
No 185
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.10 E-value=0.069 Score=51.12 Aligned_cols=79 Identities=25% Similarity=0.416 Sum_probs=51.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh--hhHHHH-HHcCCCE-EEeCCCccHHHHHHHHh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGADV-CINYKTEDFVARVKEET 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~ 214 (335)
++.++|| +|+++.+|..+++.+...|++|+++.++. +..+.+ .+++... ..|..+....+.+.+..
T Consensus 209 ~g~~vlI----------tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 278 (450)
T PRK08261 209 AGKVALV----------TGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHL 278 (450)
T ss_pred CCCEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHH
Confidence 4678999 99999999999999999999999988743 233332 3445332 23544433223333222
Q ss_pred C--CCcccEEEeCCC
Q 019790 215 G--GKGVDVILDCMG 227 (335)
Q Consensus 215 ~--~~~~d~vid~~g 227 (335)
. ..++|++|.++|
T Consensus 279 ~~~~g~id~vi~~AG 293 (450)
T PRK08261 279 AERHGGLDIVVHNAG 293 (450)
T ss_pred HHhCCCCCEEEECCC
Confidence 1 126899999987
No 186
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.046 Score=49.11 Aligned_cols=80 Identities=29% Similarity=0.417 Sum_probs=52.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~~ 211 (335)
.+.++|| +||+|.+|.++++.+...|++|++++++.++.+.+.+ .+... . .|-.+......+.
T Consensus 39 ~~k~vlI----------tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~ 108 (293)
T PRK05866 39 TGKRILL----------TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALV 108 (293)
T ss_pred CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 3568999 9999999999999998899999999999877655432 23221 2 2333322222222
Q ss_pred HHh--CCCcccEEEeCCCh
Q 019790 212 EET--GGKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~--~~~~~d~vid~~g~ 228 (335)
+.. ...++|+++.|+|.
T Consensus 109 ~~~~~~~g~id~li~~AG~ 127 (293)
T PRK05866 109 ADVEKRIGGVDILINNAGR 127 (293)
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 211 11368999999874
No 187
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.038 Score=48.54 Aligned_cols=82 Identities=24% Similarity=0.371 Sum_probs=53.1
Q ss_pred CCCCCEEEEeeccccccccccccc-hHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCCCEE--E--eCCCccH
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC--I--NYKTEDF 206 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g-~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~~~~--~--~~~~~~~ 206 (335)
+.++.++|| +|++| ++|.++++.+...|++|+++++++++.+...+ .+...+ + |..+.+.
T Consensus 14 ~~~~k~vlI----------tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~ 83 (262)
T PRK07831 14 LLAGKVVLV----------TAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQ 83 (262)
T ss_pred ccCCCEEEE----------ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHH
Confidence 345788999 99886 89999999999999999999988776544432 343222 2 3333222
Q ss_pred HHHHHHHh--CCCcccEEEeCCCh
Q 019790 207 VARVKEET--GGKGVDVILDCMGA 228 (335)
Q Consensus 207 ~~~~~~~~--~~~~~d~vid~~g~ 228 (335)
.+.+.+.. ...++|++|.++|.
T Consensus 84 ~~~~~~~~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 84 VDALIDAAVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 22222211 11368999999983
No 188
>PRK08017 oxidoreductase; Provisional
Probab=96.03 E-value=0.043 Score=47.92 Aligned_cols=76 Identities=25% Similarity=0.301 Sum_probs=53.7
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCcc-H---HHHHHHHhC
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTED-F---VARVKEETG 215 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~---~~~~~~~~~ 215 (335)
.++|| +|++|.+|.++++.+...|++|+++.++.++.+.+++.+...+ .|..+.. . .+.+.+...
T Consensus 3 k~vlV----------tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 72 (256)
T PRK08017 3 KSVLI----------TGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTD 72 (256)
T ss_pred CEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcC
Confidence 46888 9999999999999999999999999999988877776665432 2333322 1 122222222
Q ss_pred CCcccEEEeCCC
Q 019790 216 GKGVDVILDCMG 227 (335)
Q Consensus 216 ~~~~d~vid~~g 227 (335)
.++|.++.+.|
T Consensus 73 -~~~~~ii~~ag 83 (256)
T PRK08017 73 -NRLYGLFNNAG 83 (256)
T ss_pred -CCCeEEEECCC
Confidence 36788888876
No 189
>PRK06484 short chain dehydrogenase; Validated
Probab=96.02 E-value=0.061 Score=52.45 Aligned_cols=104 Identities=16% Similarity=0.248 Sum_probs=67.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE---EEeCCCcc-HHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV---CINYKTED-FVARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~-~~~~~~~~ 213 (335)
.+.++|| +|+++++|.++++.+...|++|+++.+++++.+.+.+ .+... ..|-.+.. ..+.+.+.
T Consensus 268 ~~k~~lI----------tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 268 SPRVVAI----------TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence 4667899 9999999999999999999999999998887766653 44322 22333322 22222221
Q ss_pred h-CCCcccEEEeCCChh------------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790 214 T-GGKGVDVILDCMGAS------------YF---------------QRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 214 ~-~~~~~d~vid~~g~~------------~~---------------~~~~~~l~~~G~~v~~g~~~~ 252 (335)
. ..+++|++|.|+|.. .+ +.++..++.+|+++.++....
T Consensus 338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 1 113689999988731 01 223445566799998876543
No 190
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.01 E-value=0.0019 Score=54.95 Aligned_cols=99 Identities=23% Similarity=0.252 Sum_probs=64.3
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHH----HcCCC-EEEeCCCc
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGAD-VCINYKTE 204 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~----~~g~~-~~~~~~~~ 204 (335)
.....+++|++||. .| ++.|..++-+++..|. +|+.+.+.++-.+.++ .++.+ ..+...+.
T Consensus 65 l~~L~l~pg~~VLe----------IG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg 132 (209)
T PF01135_consen 65 LEALDLKPGDRVLE----------IG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG 132 (209)
T ss_dssp HHHTTC-TT-EEEE----------ES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G
T ss_pred HHHHhcCCCCEEEE----------ec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch
Confidence 36677999999998 77 5568888888888775 6899998877555554 34543 22222221
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEE
Q 019790 205 DFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII 247 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~ 247 (335)
. .-+....+||.|+-+.+-... ...+++|+++|+++..
T Consensus 133 ~-----~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 133 S-----EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp G-----GTTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred h-----hccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 1 111123589999998887655 5678999999999875
No 191
>PRK06128 oxidoreductase; Provisional
Probab=96.01 E-value=0.098 Score=47.10 Aligned_cols=102 Identities=22% Similarity=0.345 Sum_probs=62.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh--hH----HHHHHcCCCEE-E--eCCCccH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KL----AVCKDLGADVC-I--NYKTEDF--- 206 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~----~~~~~~g~~~~-~--~~~~~~~--- 206 (335)
.+.++|| +|+++.+|.+++..+...|++|+++.++.+ .. +.++..+.... + |-.+...
T Consensus 54 ~~k~vlI----------TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~ 123 (300)
T PRK06128 54 QGRKALI----------TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQ 123 (300)
T ss_pred CCCEEEE----------ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence 4678999 999999999999999999999988775432 11 22233343222 2 3333221
Q ss_pred -HHHHHHHhCCCcccEEEeCCChh---------------------------hHHHhhccccCCCEEEEEeccCC
Q 019790 207 -VARVKEETGGKGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 207 -~~~~~~~~~~~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 252 (335)
.+.+.+.. .++|++|.++|.. .++.+++.++.+|+++.++....
T Consensus 124 ~~~~~~~~~--g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 124 LVERAVKEL--GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred HHHHHHHHh--CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 12222222 3689999988731 01233455567789988866543
No 192
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.055 Score=47.72 Aligned_cols=80 Identities=23% Similarity=0.310 Sum_probs=52.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCCE-EE--eCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADV-CI--NYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~~-~~--~~~~~~-~~~~ 209 (335)
.+.++|| +|+++++|.++++.+...|++|+++++++++.+.+.+ + +... .+ |-.+.. ..+.
T Consensus 7 ~~k~~lI----------tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~ 76 (263)
T PRK08339 7 SGKLAFT----------TASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERT 76 (263)
T ss_pred CCCEEEE----------eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence 4678999 9999999999999999999999999998776655432 1 2221 22 333322 2222
Q ss_pred HHHHhCCCcccEEEeCCCh
Q 019790 210 VKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.....++|++++++|.
T Consensus 77 ~~~~~~~g~iD~lv~nag~ 95 (263)
T PRK08339 77 VKELKNIGEPDIFFFSTGG 95 (263)
T ss_pred HHHHHhhCCCcEEEECCCC
Confidence 2222222368999998873
No 193
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.95 E-value=0.04 Score=48.46 Aligned_cols=79 Identities=27% Similarity=0.371 Sum_probs=52.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC-EEE--eCCCcc-HHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTED-FVARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~-~~~~~~~~ 213 (335)
++.++|| +|+++.+|..+++.+...|++|+++.+++++.+.+.+ ++.. ..+ |-.+.. ....+.+.
T Consensus 5 ~~k~vlV----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 5 HGQVALI----------TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence 4678999 9999999999999999999999999998887766653 3321 122 322221 22222221
Q ss_pred h-CCCcccEEEeCCC
Q 019790 214 T-GGKGVDVILDCMG 227 (335)
Q Consensus 214 ~-~~~~~d~vid~~g 227 (335)
. ...++|++|+++|
T Consensus 75 ~~~~g~id~li~~ag 89 (263)
T PRK06200 75 VDAFGKLDCFVGNAG 89 (263)
T ss_pred HHhcCCCCEEEECCC
Confidence 1 1136899999887
No 194
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.95 E-value=0.054 Score=47.03 Aligned_cols=79 Identities=19% Similarity=0.311 Sum_probs=51.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE---EEeCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV---CINYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~---~~~~~~~~-~~~~~ 210 (335)
++.++|| .|++|.+|..+++.+...|++|+++++++.+.+.+. ..+... ..|-.+.. +.+.+
T Consensus 4 ~~~~~lI----------tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (253)
T PRK08217 4 KDKVIVI----------TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATF 73 (253)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4678999 999999999999999999999999998876654432 234332 22322222 22222
Q ss_pred HHHhC-CCcccEEEeCCC
Q 019790 211 KEETG-GKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~~-~~~~d~vid~~g 227 (335)
.+... ..++|.+|.++|
T Consensus 74 ~~~~~~~~~id~vi~~ag 91 (253)
T PRK08217 74 AQIAEDFGQLNGLINNAG 91 (253)
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 22211 136899999887
No 195
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.93 E-value=0.059 Score=44.64 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=62.2
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
-.|.+|.| +| .|.+|..+++.++..|++|++.+++..........+.. .. ++.+.+.
T Consensus 34 l~g~tvgI----------iG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--~~----~l~ell~------ 90 (178)
T PF02826_consen 34 LRGKTVGI----------IG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--YV----SLDELLA------ 90 (178)
T ss_dssp STTSEEEE----------ES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--ES----SHHHHHH------
T ss_pred cCCCEEEE----------EE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce--ee----ehhhhcc------
Confidence 46889999 87 89999999999999999999999988776645555541 11 2222221
Q ss_pred cccEEEeCCChhh------HHHhhccccCCCEEEEEec
Q 019790 218 GVDVILDCMGASY------FQRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 218 ~~d~vid~~g~~~------~~~~~~~l~~~G~~v~~g~ 249 (335)
..|+|+.+.+... -...+..|+++..+|-++.
T Consensus 91 ~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 91 QADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp H-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred hhhhhhhhhccccccceeeeeeeeeccccceEEEeccc
Confidence 3799999887421 1566888888888877653
No 196
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.043 Score=48.28 Aligned_cols=79 Identities=16% Similarity=0.277 Sum_probs=52.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~~ 211 (335)
++.++|| +|++|.+|..+++.+...|++|+++.+++++.+.+.+ .+... . .|..+......+.
T Consensus 9 ~~~~vlI----------tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 78 (263)
T PRK07814 9 DDQVAVV----------TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLA 78 (263)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 4678999 9999999999999999999999999998876554432 22221 1 2333333222221
Q ss_pred HHh--CCCcccEEEeCCC
Q 019790 212 EET--GGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~--~~~~~d~vid~~g 227 (335)
+.. ...++|++|.++|
T Consensus 79 ~~~~~~~~~id~vi~~Ag 96 (263)
T PRK07814 79 GQAVEAFGRLDIVVNNVG 96 (263)
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 211 1136899999887
No 197
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.048 Score=47.71 Aligned_cols=80 Identities=23% Similarity=0.287 Sum_probs=53.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EEeCCCccHHHHHHHHh--
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CINYKTEDFVARVKEET-- 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~-- 214 (335)
.+.++|| +|++|.+|..+++.+...|++|+++++++.+.+... +++... ..|..+..-.+.+.+..
T Consensus 6 ~~~~vlI----------tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (255)
T PRK06057 6 AGRVAVI----------TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAE 75 (255)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHH
Confidence 4678999 999999999999999999999999999887665543 344322 23444332222222211
Q ss_pred CCCcccEEEeCCCh
Q 019790 215 GGKGVDVILDCMGA 228 (335)
Q Consensus 215 ~~~~~d~vid~~g~ 228 (335)
...++|+++.++|.
T Consensus 76 ~~~~id~vi~~ag~ 89 (255)
T PRK06057 76 TYGSVDIAFNNAGI 89 (255)
T ss_pred HcCCCCEEEECCCc
Confidence 11368999998863
No 198
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.065 Score=46.96 Aligned_cols=83 Identities=22% Similarity=0.255 Sum_probs=52.7
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhh-HHH----HHHcCC-C-EE--EeCCCcc
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEK-LAV----CKDLGA-D-VC--INYKTED 205 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~-~~~----~~~~g~-~-~~--~~~~~~~ 205 (335)
.+.++.++|| +||++++|.++++-+... |++|++++|++++ .+. ++..+. + .. .|..+..
T Consensus 4 ~~~~~~~vlI----------tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~ 73 (253)
T PRK07904 4 AVGNPQTILL----------LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD 73 (253)
T ss_pred ccCCCcEEEE----------EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH
Confidence 3456788999 999999999999877767 5899999988764 332 333332 1 22 2333322
Q ss_pred -HHHHHHHHhCCCcccEEEeCCCh
Q 019790 206 -FVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 206 -~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
..+.+.+.....++|+++.++|.
T Consensus 74 ~~~~~~~~~~~~g~id~li~~ag~ 97 (253)
T PRK07904 74 SHPKVIDAAFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHHHHHHHHHhcCCCCEEEEeeec
Confidence 22223333322479999987764
No 199
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.05 Score=47.55 Aligned_cols=80 Identities=24% Similarity=0.333 Sum_probs=52.7
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEE--eCCCc-cHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTE-DFVAR 209 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~-~~~~~ 209 (335)
..+.+++| +|++|.+|..++..+...|++|+++.+++++.+.+.. .+.. ..+ |..+. ++.+.
T Consensus 7 ~~~k~ilI----------tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 76 (258)
T PRK06949 7 LEGKVALV----------TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAA 76 (258)
T ss_pred CCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 45688999 9999999999999999999999999998887655432 1211 222 32222 12222
Q ss_pred HHHH-hCCCcccEEEeCCC
Q 019790 210 VKEE-TGGKGVDVILDCMG 227 (335)
Q Consensus 210 ~~~~-~~~~~~d~vid~~g 227 (335)
+.+. ....++|++|.+.|
T Consensus 77 ~~~~~~~~~~~d~li~~ag 95 (258)
T PRK06949 77 VAHAETEAGTIDILVNNSG 95 (258)
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 2211 01136899999988
No 200
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.18 Score=44.55 Aligned_cols=71 Identities=28% Similarity=0.455 Sum_probs=46.8
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE----EEeCCCccHH----HHHHHHhCCCcccEEE
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV----CINYKTEDFV----ARVKEETGGKGVDVIL 223 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~----~~~~~~~~~~----~~~~~~~~~~~~d~vi 223 (335)
+||++.+|..+++.+...|++|+++.++++..+.+ +..+... ..|..+.... +.+.+.. .++|++|
T Consensus 6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~lv 83 (272)
T PRK07832 6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH--GSMDVVM 83 (272)
T ss_pred eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc--CCCCEEE
Confidence 99999999999999999999999999887665443 2233321 2344432222 2222222 3689999
Q ss_pred eCCCh
Q 019790 224 DCMGA 228 (335)
Q Consensus 224 d~~g~ 228 (335)
.++|.
T Consensus 84 ~~ag~ 88 (272)
T PRK07832 84 NIAGI 88 (272)
T ss_pred ECCCC
Confidence 99874
No 201
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.88 E-value=0.13 Score=43.98 Aligned_cols=102 Identities=22% Similarity=0.244 Sum_probs=70.9
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCCEEEeCCC-cc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADVCINYKT-ED 205 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~ 205 (335)
.........++|- +| +.+|..++.+|..+. .+++.+.+++++.+.+++ .|.+..+.... .+
T Consensus 53 ~L~~~~~~k~iLE----------iG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd 120 (219)
T COG4122 53 LLARLSGPKRILE----------IG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD 120 (219)
T ss_pred HHHHhcCCceEEE----------ee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc
Confidence 3455567778888 77 778999999999886 489999999998877764 55544222222 35
Q ss_pred HHHHHHHHhCCCcccEEEe-CCCh---hhHHHhhccccCCCEEEEE
Q 019790 206 FVARVKEETGGKGVDVILD-CMGA---SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid-~~g~---~~~~~~~~~l~~~G~~v~~ 247 (335)
..+.+.+ ...+.||+||- +.-. ..++.+++.|++||-++.=
T Consensus 121 al~~l~~-~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 121 ALDVLSR-LLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred HHHHHHh-ccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 5555555 33358999974 4433 3468889999999987653
No 202
>PRK06196 oxidoreductase; Provisional
Probab=95.87 E-value=0.049 Score=49.47 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=52.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCcc-HHHHHHHHh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTED-FVARVKEET 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~-~~~~~~~~~ 214 (335)
.+.++|| +|++|.+|.+++..+...|++|++++|+.++.+.+. ++..-.. .|-.+.. ..+.+.+..
T Consensus 25 ~~k~vlI----------TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~ 94 (315)
T PRK06196 25 SGKTAIV----------TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFL 94 (315)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHH
Confidence 4678999 999999999999999889999999999887665443 2221122 2333322 222222221
Q ss_pred C-CCcccEEEeCCC
Q 019790 215 G-GKGVDVILDCMG 227 (335)
Q Consensus 215 ~-~~~~d~vid~~g 227 (335)
. ..++|++|.++|
T Consensus 95 ~~~~~iD~li~nAg 108 (315)
T PRK06196 95 DSGRRIDILINNAG 108 (315)
T ss_pred hcCCCCCEEEECCC
Confidence 1 236999999887
No 203
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.068 Score=46.64 Aligned_cols=73 Identities=18% Similarity=0.275 Sum_probs=50.7
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCccHHHHHHHH
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVARVKEE 213 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~~~~ 213 (335)
.++|| +|++|.+|..+++.+...|++|+++++++...+.+.+ .+... + .|..+. ..+.+.
T Consensus 3 ~~vlV----------tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~ 69 (257)
T PRK09291 3 KTILI----------TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA---IDRAQA 69 (257)
T ss_pred CEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH---HHHHHH
Confidence 47899 9999999999999999999999999998766554432 23221 1 233332 233333
Q ss_pred hCCCcccEEEeCCC
Q 019790 214 TGGKGVDVILDCMG 227 (335)
Q Consensus 214 ~~~~~~d~vid~~g 227 (335)
.. .++|++|.|+|
T Consensus 70 ~~-~~id~vi~~ag 82 (257)
T PRK09291 70 AE-WDVDVLLNNAG 82 (257)
T ss_pred hc-CCCCEEEECCC
Confidence 33 37999999987
No 204
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.83 E-value=0.047 Score=47.44 Aligned_cols=80 Identities=26% Similarity=0.334 Sum_probs=51.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC--CCE-EE--eCCCcc-HHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--ADV-CI--NYKTED-FVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g--~~~-~~--~~~~~~-~~~~~~ 211 (335)
++.++|| +|++|.+|..+++.+...|++|++++|++++.+.+. .+. ... .+ |..+.. +...+.
T Consensus 4 ~~~~vlI----------tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (251)
T PRK07231 4 EGKVAIV----------TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVA 73 (251)
T ss_pred CCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 3568999 999999999999999999999999999987765543 222 111 12 222222 222222
Q ss_pred HH-hCCCcccEEEeCCCh
Q 019790 212 EE-TGGKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~-~~~~~~d~vid~~g~ 228 (335)
+. ....++|++|.++|.
T Consensus 74 ~~~~~~~~~d~vi~~ag~ 91 (251)
T PRK07231 74 AALERFGSVDILVNNAGT 91 (251)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 11 112368999998874
No 205
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.82 E-value=0.15 Score=41.96 Aligned_cols=91 Identities=20% Similarity=0.318 Sum_probs=60.4
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh------
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS------ 229 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~------ 229 (335)
+|++|-+|....+=|+.+|-+|++++|++++....... .++..+-.+.. .+.+.+ .++|+||++.+..
T Consensus 6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd~~-~~a~~l--~g~DaVIsA~~~~~~~~~~ 79 (211)
T COG2910 6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFDLT-SLASDL--AGHDAVISAFGAGASDNDE 79 (211)
T ss_pred EecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccChh-hhHhhh--cCCceEEEeccCCCCChhH
Confidence 89999999999999999999999999999887654221 11111111111 122222 4799999988753
Q ss_pred ----hHHHhhccccCC--CEEEEEeccCC
Q 019790 230 ----YFQRNLGSLNID--GRLFIIGTQGG 252 (335)
Q Consensus 230 ----~~~~~~~~l~~~--G~~v~~g~~~~ 252 (335)
..+..+..|+.- -|+..+|+...
T Consensus 80 ~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 80 LHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred HHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 123356666653 48888887653
No 206
>PRK04148 hypothetical protein; Provisional
Probab=95.82 E-value=0.091 Score=41.12 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=56.5
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGG 216 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~ 216 (335)
.++.++++ .| .| .|...+..+..+|.+|++++.+++..+.+++.+.+.+.+.-. .+. .+ .
T Consensus 15 ~~~~kile----------IG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~---y-- 75 (134)
T PRK04148 15 GKNKKIVE----------LG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EI---Y-- 75 (134)
T ss_pred ccCCEEEE----------EE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HH---H--
Confidence 45577888 77 67 887666666678999999999999999998888766554322 211 11 1
Q ss_pred CcccEEEeCCChhhHHHhhccc
Q 019790 217 KGVDVILDCMGASYFQRNLGSL 238 (335)
Q Consensus 217 ~~~d~vid~~g~~~~~~~~~~l 238 (335)
+++|+++.+-....++..+..|
T Consensus 76 ~~a~liysirpp~el~~~~~~l 97 (134)
T PRK04148 76 KNAKLIYSIRPPRDLQPFILEL 97 (134)
T ss_pred hcCCEEEEeCCCHHHHHHHHHH
Confidence 2688998888776665544333
No 207
>PRK06194 hypothetical protein; Provisional
Probab=95.82 E-value=0.06 Score=47.96 Aligned_cols=79 Identities=18% Similarity=0.337 Sum_probs=50.2
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H---cCCCE-EE--eCCCc-cHHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADV-CI--NYKTE-DFVARVK 211 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~---~g~~~-~~--~~~~~-~~~~~~~ 211 (335)
+.++|| +||+|.+|..++..+...|++|++++++.+..+... + .+... .+ |-.+. .+.+.+.
T Consensus 6 ~k~vlV----------tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 75 (287)
T PRK06194 6 GKVAVI----------TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD 75 (287)
T ss_pred CCEEEE----------eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 568999 999999999999999889999999998866554432 2 23322 12 22222 1111111
Q ss_pred HHh-CCCcccEEEeCCCh
Q 019790 212 EET-GGKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~-~~~~~d~vid~~g~ 228 (335)
... ...++|++|.++|.
T Consensus 76 ~~~~~~g~id~vi~~Ag~ 93 (287)
T PRK06194 76 AALERFGAVHLLFNNAGV 93 (287)
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 110 11358999998874
No 208
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.76 E-value=0.14 Score=46.69 Aligned_cols=99 Identities=23% Similarity=0.167 Sum_probs=66.8
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHH----HcCCCEEEeCCCccH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDF 206 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~ 206 (335)
....++++++||. .| +| .|..++.+++..+. +|++++.+++..+.++ ..+.+.+... ..+.
T Consensus 74 ~~L~i~~g~~VLD----------IG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD~ 140 (322)
T PRK13943 74 EWVGLDKGMRVLE----------IG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGDG 140 (322)
T ss_pred HhcCCCCCCEEEE----------Ee-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCCh
Confidence 4456788999998 87 44 69999999998764 6999999988765554 3555433211 1222
Q ss_pred HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790 207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~ 247 (335)
.+.+. ...+||+|+.+.+... ....++.|+++|+++..
T Consensus 141 ~~~~~---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 141 YYGVP---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred hhccc---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 21111 1246999999887654 34578899999998764
No 209
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.74 E-value=0.072 Score=46.28 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=50.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHHHcCCCE-E--EeCCCcc-HHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV-C--INYKTED-FVARVKE 212 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~g~~~-~--~~~~~~~-~~~~~~~ 212 (335)
.+.++|| .|+++.+|..++..+...|++|++++++... .+.+++.+... . .|..+.. +...+.+
T Consensus 4 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (248)
T TIGR01832 4 EGKVALV----------TGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDS 73 (248)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 4678999 9999999999999999999999999986532 23333444322 2 2333322 2222222
Q ss_pred Hh-CCCcccEEEeCCCh
Q 019790 213 ET-GGKGVDVILDCMGA 228 (335)
Q Consensus 213 ~~-~~~~~d~vid~~g~ 228 (335)
.. ...++|+++.++|.
T Consensus 74 ~~~~~~~~d~li~~ag~ 90 (248)
T TIGR01832 74 AVEEFGHIDILVNNAGI 90 (248)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 11 11368999998863
No 210
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.059 Score=47.87 Aligned_cols=79 Identities=27% Similarity=0.249 Sum_probs=52.7
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC-CCE---EEeCCCccH-HHHHHHHh
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-ADV---CINYKTEDF-VARVKEET 214 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g-~~~---~~~~~~~~~-~~~~~~~~ 214 (335)
+.++|| +|++|.+|.++++.+...|++|+++++++++.+.+.+.. ... ..|..+... ...+....
T Consensus 4 ~~~vlV----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 4 MKTWLI----------TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CCEEEE----------ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence 467999 999999999999999989999999999988776665432 111 123333221 22222111
Q ss_pred -CCCcccEEEeCCCh
Q 019790 215 -GGKGVDVILDCMGA 228 (335)
Q Consensus 215 -~~~~~d~vid~~g~ 228 (335)
.-.++|+++.++|.
T Consensus 74 ~~~~~~d~vv~~ag~ 88 (277)
T PRK06180 74 ATFGPIDVLVNNAGY 88 (277)
T ss_pred HHhCCCCEEEECCCc
Confidence 11258999999875
No 211
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.72 E-value=0.12 Score=48.95 Aligned_cols=142 Identities=17% Similarity=0.265 Sum_probs=88.7
Q ss_pred CCCCCceEEEEEEecCCCCCCCCCCEEE-----------------EecCCcceeeEEEecCCceEe---C-CCCCChhhh
Q 019790 59 PYPGLECSGTILSVGKNVSRWKVGDQVC-----------------ALLGGGGYAEKVAVPAGQVLP---V-PSGVSLKDA 117 (335)
Q Consensus 59 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~-----------------~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~a 117 (335)
..-|.|+++-+.+|+++.+..-+|+.-+ +...++.|++++.++. .+.. + +..++...+
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~ 166 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA 166 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence 3468899999999999887665665532 1112356777776654 2221 2 222222222
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHH-HHHHcCC
Q 019790 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGA 195 (335)
Q Consensus 118 a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~-~~~~~g~ 195 (335)
| .-.+. +..+..++.+++| .| +|.+|..+++.++..| .+|+++.++.++.+ .++.++.
T Consensus 167 A--------v~la~-~~~~~l~~~~VlV----------iG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~ 226 (417)
T TIGR01035 167 A--------VELAE-RIFGSLKGKKALL----------IG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG 226 (417)
T ss_pred H--------HHHHH-HHhCCccCCEEEE----------EC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC
Confidence 1 11122 3333467789999 88 6999999999999999 58999999988755 4456665
Q ss_pred CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 196 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
.. ++. +.+.+.. .++|+||.|+++..
T Consensus 227 ~~-i~~------~~l~~~l--~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 227 EA-VKF------EDLEEYL--AEADIVISSTGAPH 252 (417)
T ss_pred eE-eeH------HHHHHHH--hhCCEEEECCCCCC
Confidence 32 221 1222332 25899999998753
No 212
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.69 E-value=0.075 Score=46.49 Aligned_cols=78 Identities=23% Similarity=0.334 Sum_probs=51.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCccHHH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVA--- 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~--- 208 (335)
.+.++|| +|++|.+|..++..+...|++|+++.+++++.+.+ ++.+.... .|..+....+
T Consensus 6 ~~~~vlI----------tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (262)
T PRK13394 6 NGKTAVV----------TGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGI 75 (262)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHH
Confidence 4678999 99999999999999999999999999988655433 23343322 1333322111
Q ss_pred -HHHHHhCCCcccEEEeCCCh
Q 019790 209 -RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 -~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|++|.|+|.
T Consensus 76 ~~~~~~~--~~~d~vi~~ag~ 94 (262)
T PRK13394 76 DKVAERF--GSVDILVSNAGI 94 (262)
T ss_pred HHHHHHc--CCCCEEEECCcc
Confidence 222222 358999998874
No 213
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.063 Score=48.72 Aligned_cols=77 Identities=17% Similarity=0.336 Sum_probs=51.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc-----CCCE-E--EeCCCcc----
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GADV-C--INYKTED---- 205 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~-----g~~~-~--~~~~~~~---- 205 (335)
.+.+++| +|+++++|.+++..+...|++|++++|+.++.+.+. ++ +... . .|-.+..
T Consensus 13 ~gk~~lI----------TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~ 82 (313)
T PRK05854 13 SGKRAVV----------TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAA 82 (313)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHH
Confidence 3678999 999999999999999889999999999877654432 11 1111 1 2333322
Q ss_pred HHHHHHHHhCCCcccEEEeCCC
Q 019790 206 FVARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.+. ..++|++|+++|
T Consensus 83 ~~~~~~~~--~~~iD~li~nAG 102 (313)
T PRK05854 83 LGEQLRAE--GRPIHLLINNAG 102 (313)
T ss_pred HHHHHHHh--CCCccEEEECCc
Confidence 12222222 236899999887
No 214
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.087 Score=46.03 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=49.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccHHHHHHHHhCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGG 216 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~ 216 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.+++.........+.... .|..+. +.+.+..+
T Consensus 13 ~~k~~lI----------TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~- 78 (245)
T PRK12367 13 QGKRIGI----------TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKE---ESLDKQLA- 78 (245)
T ss_pred CCCEEEE----------EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCH---HHHHHhcC-
Confidence 3578999 9999999999999999999999999987622211111111122 233222 23333332
Q ss_pred CcccEEEeCCCh
Q 019790 217 KGVDVILDCMGA 228 (335)
Q Consensus 217 ~~~d~vid~~g~ 228 (335)
++|++|+|+|.
T Consensus 79 -~iDilVnnAG~ 89 (245)
T PRK12367 79 -SLDVLILNHGI 89 (245)
T ss_pred -CCCEEEECCcc
Confidence 59999999874
No 215
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.67 E-value=0.13 Score=44.61 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=66.7
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCcc
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTED 205 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 205 (335)
....+..+..++|- .| +..|..++.+++.+ +.+|+.++.+++..+.+++ .|....+.....+
T Consensus 61 ~~l~~~~~~~~vLE----------iG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd 128 (234)
T PLN02781 61 SMLVKIMNAKNTLE----------IG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD 128 (234)
T ss_pred HHHHHHhCCCEEEE----------ec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc
Confidence 34556667788988 77 56777777788776 3599999999887776653 4432222222333
Q ss_pred HHHHHHHHhC---CCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790 206 FVARVKEETG---GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 206 ~~~~~~~~~~---~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 246 (335)
..+.+.+... ...||+||--... ..+..+++.+++||.++.
T Consensus 129 a~~~L~~l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 129 ALSALDQLLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred HHHHHHHHHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3444444321 2479999865543 235778899999998765
No 216
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.67 E-value=0.13 Score=42.13 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=60.9
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch-HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG-IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~-~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
.|+...++...+.....--.+.+++| .|+ |. +|..++..++..|++|+++.++.+
T Consensus 24 ~p~~~~a~v~l~~~~~~~l~gk~vlV----------iG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~------------- 79 (168)
T cd01080 24 IPCTPAGILELLKRYGIDLAGKKVVV----------VGR-SNIVGKPLAALLLNRNATVTVCHSKTK------------- 79 (168)
T ss_pred cCChHHHHHHHHHHcCCCCCCCEEEE----------ECC-cHHHHHHHHHHHhhCCCEEEEEECCch-------------
Confidence 44444444544444433457889999 885 65 699899999999999998887631
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+.+.. ..+|+||.|++...+ --.+.++++-.++.++.+.
T Consensus 80 ----------~l~~~l--~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 80 ----------NLKEHT--KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred ----------hHHHHH--hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 122222 248999999998653 1122455555566776554
No 217
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.67 E-value=0.039 Score=46.13 Aligned_cols=96 Identities=23% Similarity=0.246 Sum_probs=58.8
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV 210 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~ 210 (335)
.++++.++|- .| ++.|..+..+++.. +++|+.++.+++..+.+++ .+.+.+ .....+..
T Consensus 42 ~l~~g~~VLD----------iG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~--- 105 (187)
T PRK00107 42 YLPGGERVLD----------VG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGRAE--- 105 (187)
T ss_pred hcCCCCeEEE----------Ec--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEeccHh---
Confidence 3455778877 66 34455555666544 6799999999887766643 443221 11112211
Q ss_pred HHHhCCCcccEEEeCCCh---hhHHHhhccccCCCEEEEEe
Q 019790 211 KEETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g 248 (335)
+....+.||+|+-.... ..+..+.+.|+++|+++.+-
T Consensus 106 -~~~~~~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 106 -EFGQEEKFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred -hCCCCCCccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 11123479999964332 23567889999999998773
No 218
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.65 E-value=0.025 Score=48.42 Aligned_cols=97 Identities=21% Similarity=0.122 Sum_probs=62.5
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LGADV--CINYKTE 204 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~ 204 (335)
....+++++++|- .| ++.|..+..+++..+. +|+.++.+++..+.+++ .+.+. ++..+..
T Consensus 71 ~~l~~~~~~~VLD----------iG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~ 138 (215)
T TIGR00080 71 ELLELKPGMKVLE----------IG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGT 138 (215)
T ss_pred HHhCCCCcCEEEE----------EC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcc
Confidence 4557889999988 76 5567777788887653 69999998887766643 44322 2211111
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEE
Q 019790 205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 247 (335)
+. .....+||+|+-+.... ......+.|+++|+++..
T Consensus 139 ---~~---~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 139 ---QG---WEPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ---cC---CcccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 10 11124799988554333 345678899999998764
No 219
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.073 Score=46.46 Aligned_cols=77 Identities=25% Similarity=0.328 Sum_probs=52.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCcc-HH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTED-FV--- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~-~~--- 207 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.++.++.+.+.+ .+... . .|-.+.. ..
T Consensus 8 ~~k~vlV----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 77 (253)
T PRK05867 8 HGKRALI----------TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSML 77 (253)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 4678999 9999999999999999999999999998776655432 23221 1 2333322 22
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|+++.+.|
T Consensus 78 ~~~~~~~--g~id~lv~~ag 95 (253)
T PRK05867 78 DQVTAEL--GGIDIAVCNAG 95 (253)
T ss_pred HHHHHHh--CCCCEEEECCC
Confidence 2222222 36899999887
No 220
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.078 Score=46.00 Aligned_cols=78 Identities=24% Similarity=0.366 Sum_probs=52.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-H---HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-F---VARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~---~~~~ 210 (335)
++.+++| .|++|.+|..+++.+...|++|++++++++..+.+. +++.... + |..+.. . .+.+
T Consensus 5 ~~k~vlI----------tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (249)
T PRK06500 5 QGKTALI----------TGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQAL 74 (249)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence 4568999 999999999999999999999999998876655443 4454321 2 322222 1 1222
Q ss_pred HHHhCCCcccEEEeCCCh
Q 019790 211 KEETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~ 228 (335)
.+.. .++|++|.++|.
T Consensus 75 ~~~~--~~id~vi~~ag~ 90 (249)
T PRK06500 75 AEAF--GRLDAVFINAGV 90 (249)
T ss_pred HHHh--CCCCEEEECCCC
Confidence 2222 368999998873
No 221
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.082 Score=46.18 Aligned_cols=78 Identities=23% Similarity=0.278 Sum_probs=51.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCcc-HHH--
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTED-FVA-- 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~~-- 208 (335)
.+.++|| .||++.+|..++..+...|++|+++.++++..+.+.+ .+.. ...|..+.. +..
T Consensus 4 ~~k~vlI----------tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (258)
T PRK07890 4 KGKVVVV----------SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLV 73 (258)
T ss_pred CCCEEEE----------ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHH
Confidence 4678999 9999999999999999999999999998876655432 1222 122333322 222
Q ss_pred -HHHHHhCCCcccEEEeCCCh
Q 019790 209 -RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 -~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|++|.+.|.
T Consensus 74 ~~~~~~~--g~~d~vi~~ag~ 92 (258)
T PRK07890 74 ALALERF--GRVDALVNNAFR 92 (258)
T ss_pred HHHHHHc--CCccEEEECCcc
Confidence 222222 368999998863
No 222
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.064 Score=46.80 Aligned_cols=78 Identities=24% Similarity=0.344 Sum_probs=51.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE--E--EeCCCcc-HHH---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--C--INYKTED-FVA---RV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~-~~~---~~ 210 (335)
++.++|| +|+++.+|..+++.+...|++|+++.++++..+...+..... . .|-.+.. +.+ .+
T Consensus 14 ~~k~vlI----------tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 14 SGKVAVV----------TGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence 4678999 999999999999999889999999999876554444432211 2 2332221 111 22
Q ss_pred HHHhCCCcccEEEeCCCh
Q 019790 211 KEETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~ 228 (335)
.+.. .++|+++.++|.
T Consensus 84 ~~~~--~~~d~vi~~ag~ 99 (255)
T PRK06841 84 ISAF--GRIDILVNSAGV 99 (255)
T ss_pred HHHh--CCCCEEEECCCC
Confidence 2222 368999998873
No 223
>PRK06720 hypothetical protein; Provisional
Probab=95.60 E-value=0.15 Score=41.90 Aligned_cols=40 Identities=33% Similarity=0.407 Sum_probs=34.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 188 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~ 188 (335)
.+..++| .|+++++|...+..+...|++|+++.++.+..+
T Consensus 15 ~gk~~lV----------TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIV----------TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEE----------ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4678999 999999999999988888999999998876553
No 224
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.092 Score=46.28 Aligned_cols=79 Identities=23% Similarity=0.247 Sum_probs=51.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~ 210 (335)
++.++|| .|+++.+|..+++.+...|++|+++.+++++.+... ..+... . .|-.+.. ....+
T Consensus 8 ~~k~ilI----------tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~ 77 (264)
T PRK07576 8 AGKNVVV----------VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF 77 (264)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence 5678999 999999999999999999999999999877654332 222221 1 2333322 22222
Q ss_pred HHHh-CCCcccEEEeCCC
Q 019790 211 KEET-GGKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~-~~~~~d~vid~~g 227 (335)
.+.. ...++|++|.+.|
T Consensus 78 ~~~~~~~~~iD~vi~~ag 95 (264)
T PRK07576 78 AQIADEFGPIDVLVSGAA 95 (264)
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 2221 1136899998875
No 225
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.085 Score=46.22 Aligned_cols=78 Identities=24% Similarity=0.359 Sum_probs=52.4
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC-CC-E--EEeCCCcc-HHHHHHHHh
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-AD-V--CINYKTED-FVARVKEET 214 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g-~~-~--~~~~~~~~-~~~~~~~~~ 214 (335)
.++|| +||+|.+|..+++.+...|++|++++++.+..+.+.. .+ .. . ..|-.+.. +.+.+.+..
T Consensus 2 k~vlI----------tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 71 (260)
T PRK08267 2 KSIFI----------TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFA 71 (260)
T ss_pred cEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 36888 9999999999999998899999999999887766643 22 11 1 22333322 222222221
Q ss_pred C--CCcccEEEeCCCh
Q 019790 215 G--GKGVDVILDCMGA 228 (335)
Q Consensus 215 ~--~~~~d~vid~~g~ 228 (335)
. ..++|+++.|+|.
T Consensus 72 ~~~~~~id~vi~~ag~ 87 (260)
T PRK08267 72 AATGGRLDVLFNNAGI 87 (260)
T ss_pred HHcCCCCCEEEECCCC
Confidence 1 2468999998874
No 226
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.07 Score=47.16 Aligned_cols=77 Identities=22% Similarity=0.336 Sum_probs=52.7
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC-CCE-EEeCCCcc-HH---HHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG-ADV-CINYKTED-FV---ARVKE 212 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g-~~~-~~~~~~~~-~~---~~~~~ 212 (335)
+.++|| +|++|.+|..+++.+...|++|+++.+++++.+.+. .++ ... ..|-.+.+ +. +.+.+
T Consensus 5 ~~~ilV----------tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (273)
T PRK07825 5 GKVVAI----------TGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA 74 (273)
T ss_pred CCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH
Confidence 568999 999999999999988888999999999888776553 343 221 22333322 21 22222
Q ss_pred HhCCCcccEEEeCCCh
Q 019790 213 ETGGKGVDVILDCMGA 228 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~ 228 (335)
.. .++|+++.++|.
T Consensus 75 ~~--~~id~li~~ag~ 88 (273)
T PRK07825 75 DL--GPIDVLVNNAGV 88 (273)
T ss_pred Hc--CCCCEEEECCCc
Confidence 22 368999999873
No 227
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.11 Score=45.72 Aligned_cols=80 Identities=21% Similarity=0.303 Sum_probs=52.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--CCC-EE--EeCCCccHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VC--INYKTEDFVARVKE 212 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~~~~~~~~ 212 (335)
++.++|| +||+|.+|..++..+...|++|++++++++..+.+.. + +.. .. .|-.+..-...+.+
T Consensus 4 ~~~~vlI----------tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 73 (263)
T PRK09072 4 KDKRVLL----------TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLA 73 (263)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 4568999 9999999999999999999999999999877665542 2 211 11 23333221111211
Q ss_pred -HhCCCcccEEEeCCCh
Q 019790 213 -ETGGKGVDVILDCMGA 228 (335)
Q Consensus 213 -~~~~~~~d~vid~~g~ 228 (335)
....+++|.++.++|.
T Consensus 74 ~~~~~~~id~lv~~ag~ 90 (263)
T PRK09072 74 RAREMGGINVLINNAGV 90 (263)
T ss_pred HHHhcCCCCEEEECCCC
Confidence 1112468999998874
No 228
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.55 E-value=0.08 Score=48.18 Aligned_cols=79 Identities=22% Similarity=0.304 Sum_probs=51.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~-~~~~~ 210 (335)
.+.++|| +|+++.+|..+++.+...|++|++++|+.++.+.+. ++. .. .. .|-.+.. ..+.+
T Consensus 5 ~~k~vlV----------TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 74 (322)
T PRK07453 5 AKGTVII----------TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFV 74 (322)
T ss_pred CCCEEEE----------EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHH
Confidence 3568999 999999999999999888999999999887665443 231 11 11 2333322 22222
Q ss_pred HHHh-CCCcccEEEeCCC
Q 019790 211 KEET-GGKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~-~~~~~d~vid~~g 227 (335)
.+.. ...++|++|+++|
T Consensus 75 ~~~~~~~~~iD~li~nAg 92 (322)
T PRK07453 75 DDFRALGKPLDALVCNAA 92 (322)
T ss_pred HHHHHhCCCccEEEECCc
Confidence 2211 1236899999887
No 229
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.54 E-value=0.08 Score=47.26 Aligned_cols=148 Identities=18% Similarity=0.250 Sum_probs=85.4
Q ss_pred CCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh-cCCCCCCEEEEeecccccccccc
Q 019790 79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT-SHLSPGESFLVDFCSISYSDVHG 157 (335)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~-~~~~~~~~vli~~~~~~~~~~~g 157 (335)
+++|++.+-.. +|.++..-....++++.+++-+-.+ ....|++ +|... .-++++.++|= .|
T Consensus 109 ~rig~~f~I~P---sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlD----------vG 170 (300)
T COG2264 109 VRIGERFVIVP---SWREYPEPSDELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLD----------VG 170 (300)
T ss_pred EEeeeeEEECC---CCccCCCCCCceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEE----------ec
Confidence 56777766543 3444322223556777766654333 3333433 33222 23357777776 66
Q ss_pred ccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-
Q 019790 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF- 231 (335)
Q Consensus 158 ~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~- 231 (335)
++.|.+++..++. |+ +|++++-.+...+.+++ .+... ... ...+ ...+...+++||+|+.++=...+
T Consensus 171 --cGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~-~~~~--~~~~~~~~~~~DvIVANILA~vl~ 243 (300)
T COG2264 171 --CGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVEL-LVQ-AKGF--LLLEVPENGPFDVIVANILAEVLV 243 (300)
T ss_pred --CChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCch-hhh-cccc--cchhhcccCcccEEEehhhHHHHH
Confidence 5567777776665 77 69999988776666653 23221 000 0101 11111223589999988855432
Q ss_pred ---HHhhccccCCCEEEEEeccC
Q 019790 232 ---QRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 232 ---~~~~~~l~~~G~~v~~g~~~ 251 (335)
......++++|++++-|...
T Consensus 244 ~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 244 ELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred HHHHHHHHHcCCCceEEEEeehH
Confidence 56788899999999988654
No 230
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.11 Score=45.41 Aligned_cols=78 Identities=27% Similarity=0.409 Sum_probs=52.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-H---H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-F---V 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~---~ 207 (335)
.+.++|| .|+++.+|..++..+...|++|+++++++++.+.+. +.+... .+ |..+.+ . .
T Consensus 5 ~~k~~lI----------tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 74 (254)
T PRK07478 5 NGKVAII----------TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALV 74 (254)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 3568999 999999999999999999999999999887765543 233222 22 322222 1 1
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|++|.++|.
T Consensus 75 ~~~~~~~--~~id~li~~ag~ 93 (254)
T PRK07478 75 ALAVERF--GGLDIAFNNAGT 93 (254)
T ss_pred HHHHHhc--CCCCEEEECCCC
Confidence 2222222 368999998873
No 231
>PLN02476 O-methyltransferase
Probab=95.53 E-value=0.16 Score=45.16 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=69.3
Q ss_pred HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCc
Q 019790 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTE 204 (335)
Q Consensus 131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~ 204 (335)
+.......+..++|- +| +.+|..++.+|+.+ +.+|+.++.+++..+.++ +.|....+.....
T Consensus 110 L~~L~~~~~ak~VLE----------IG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G 177 (278)
T PLN02476 110 LAMLVQILGAERCIE----------VG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG 177 (278)
T ss_pred HHHHHHhcCCCeEEE----------ec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 334556667788998 87 67788888898877 347999999988777764 3454322333334
Q ss_pred cHHHHHHHHh---CCCcccEEEeCCChh----hHHHhhccccCCCEEEE
Q 019790 205 DFVARVKEET---GGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 205 ~~~~~~~~~~---~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~ 246 (335)
+..+.+.+.. ....||.||--.... .+..+++.|+++|.++.
T Consensus 178 dA~e~L~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 178 LAAESLKSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred CHHHHHHHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4444444432 124799998655542 35778899999998764
No 232
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.077 Score=46.41 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=51.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE-EE--eCCCcc-HHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV-CI--NYKTED-FVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~-~~--~~~~~~-~~~~~~ 211 (335)
.+.++|| +|++|.+|..+++.+...|++|++++++++..+..++ .+... .+ |..+.. ....+.
T Consensus 6 ~~~~ilI----------tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 75 (258)
T PRK08628 6 KDKVVIV----------TGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVE 75 (258)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 4568999 9999999999999998899999999988776533332 33221 22 222221 222122
Q ss_pred HHhC-CCcccEEEeCCC
Q 019790 212 EETG-GKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~~-~~~~d~vid~~g 227 (335)
+... ..++|++|.++|
T Consensus 76 ~~~~~~~~id~vi~~ag 92 (258)
T PRK08628 76 QTVAKFGRIDGLVNNAG 92 (258)
T ss_pred HHHHhcCCCCEEEECCc
Confidence 2111 136899999988
No 233
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.52 E-value=0.67 Score=38.78 Aligned_cols=77 Identities=26% Similarity=0.354 Sum_probs=52.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCCEE-EeCCCccHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC-INYKTEDFVARVKE 212 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~~~-~~~~~~~~~~~~~~ 212 (335)
.+.+++| .|++|.+|..++..+...|++|+++.|+.++.+.+.+ + +.... .+..+ .+.+.+
T Consensus 27 ~~~~vlV----------lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~ 93 (194)
T cd01078 27 KGKTAVV----------LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAA 93 (194)
T ss_pred CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHH
Confidence 5678999 9989999999888888889999999999877665542 2 22211 11221 122233
Q ss_pred HhCCCcccEEEeCCChhh
Q 019790 213 ETGGKGVDVILDCMGASY 230 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~~~ 230 (335)
.. .++|+||.+++...
T Consensus 94 ~~--~~~diVi~at~~g~ 109 (194)
T cd01078 94 AI--KGADVVFAAGAAGV 109 (194)
T ss_pred HH--hcCCEEEECCCCCc
Confidence 33 35899999887654
No 234
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.49 E-value=0.088 Score=46.02 Aligned_cols=79 Identities=15% Similarity=0.201 Sum_probs=50.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHHHcCCCE---EEeCCCcc-HHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV---CINYKTED-FVARVKE 212 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~g~~~---~~~~~~~~-~~~~~~~ 212 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.+++.. .+.+++.+.+. ..|-.+.. +.+.+.+
T Consensus 7 ~~k~~lI----------tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12481 7 NGKVAII----------TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQ 76 (251)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHH
Confidence 4678999 9999999999999999999999998875432 22333444332 12333322 2222222
Q ss_pred Hh-CCCcccEEEeCCC
Q 019790 213 ET-GGKGVDVILDCMG 227 (335)
Q Consensus 213 ~~-~~~~~d~vid~~g 227 (335)
.. ...++|+++.+.|
T Consensus 77 ~~~~~g~iD~lv~~ag 92 (251)
T PRK12481 77 AVEVMGHIDILINNAG 92 (251)
T ss_pred HHHHcCCCCEEEECCC
Confidence 11 1136899999887
No 235
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.082 Score=46.37 Aligned_cols=78 Identities=19% Similarity=0.341 Sum_probs=49.8
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-HHHHHHH
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-FVARVKE 212 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~~~~~~~ 212 (335)
.++|| .|++|.+|..+++.+...|++|+++++++.+.+.+. ..+.... + |..+.. +...+.+
T Consensus 2 ~~vlV----------tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 71 (263)
T PRK06181 2 KVVII----------TGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA 71 (263)
T ss_pred CEEEE----------ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 46889 999999999999999999999999999876654332 2333221 1 222221 2222222
Q ss_pred Hh-CCCcccEEEeCCCh
Q 019790 213 ET-GGKGVDVILDCMGA 228 (335)
Q Consensus 213 ~~-~~~~~d~vid~~g~ 228 (335)
.. ...++|++|.|+|.
T Consensus 72 ~~~~~~~id~vi~~ag~ 88 (263)
T PRK06181 72 AVARFGGIDILVNNAGI 88 (263)
T ss_pred HHHHcCCCCEEEECCCc
Confidence 11 11368999999864
No 236
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.49 E-value=0.098 Score=45.09 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=51.3
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-HHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-FVARVK 211 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~~~~~~ 211 (335)
+.++|| +|++|.+|..+++.+...|.+|+++.+++++.+... +.+.... .|..+.. +...+.
T Consensus 5 ~~~ilI----------tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (246)
T PRK05653 5 GKTALV----------TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIE 74 (246)
T ss_pred CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 468999 999999999999999999999999999877654432 2333222 2333322 222222
Q ss_pred HHhC-CCcccEEEeCCCh
Q 019790 212 EETG-GKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~~-~~~~d~vid~~g~ 228 (335)
+... -.++|.++.++|.
T Consensus 75 ~~~~~~~~id~vi~~ag~ 92 (246)
T PRK05653 75 AAVEAFGALDILVNNAGI 92 (246)
T ss_pred HHHHHhCCCCEEEECCCc
Confidence 2111 1358999998864
No 237
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.11 Score=45.61 Aligned_cols=77 Identities=22% Similarity=0.309 Sum_probs=51.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c-----CCCE-EE--eCCCcc-HH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L-----GADV-CI--NYKTED-FV- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~-----g~~~-~~--~~~~~~-~~- 207 (335)
.+.++|| .|+++.+|.+++..+...|++|+++.+++++.+.+.+ + +... .+ |..+.. ..
T Consensus 6 ~~k~vlV----------tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 75 (260)
T PRK07063 6 AGKVALV----------TGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAA 75 (260)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHH
Confidence 4678999 9999999999999999999999999998776654432 1 2211 12 333221 22
Q ss_pred --HHHHHHhCCCcccEEEeCCC
Q 019790 208 --ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 --~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|++|.++|
T Consensus 76 ~~~~~~~~~--g~id~li~~ag 95 (260)
T PRK07063 76 AVAAAEEAF--GPLDVLVNNAG 95 (260)
T ss_pred HHHHHHHHh--CCCcEEEECCC
Confidence 2222222 36899999887
No 238
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.41 E-value=0.14 Score=45.53 Aligned_cols=81 Identities=21% Similarity=0.362 Sum_probs=61.1
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCC---CEEEeCCCcc-HHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGA---DVCINYKTED-FVA 208 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~---~~~~~~~~~~-~~~ 208 (335)
+.|++.+| .|++.++|.+-+.=+-.+|.+|+.+.|++++++..++ .+. ..++|....+ ..+
T Consensus 47 ~~g~WAVV----------TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye 116 (312)
T KOG1014|consen 47 KLGSWAVV----------TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYE 116 (312)
T ss_pred hcCCEEEE----------ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHH
Confidence 34678888 9999999976554444489999999999999987752 232 2345776655 367
Q ss_pred HHHHHhCCCcccEEEeCCCh
Q 019790 209 RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~ 228 (335)
.+++.+.+-.+-+.++|+|.
T Consensus 117 ~i~~~l~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 117 KLLEKLAGLDVGILVNNVGM 136 (312)
T ss_pred HHHHHhcCCceEEEEecccc
Confidence 78888888888999999984
No 239
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.097 Score=45.63 Aligned_cols=78 Identities=19% Similarity=0.275 Sum_probs=51.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-H---H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-F---V 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~---~ 207 (335)
.+.+++| .|++|.+|..++..+...|++|+++++++++.+.+. +.+... . .|..+.. . .
T Consensus 6 ~~k~ilI----------tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 75 (253)
T PRK06172 6 SGKVALV----------TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALV 75 (253)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4678999 999999999999998889999999999877654432 233222 2 2322221 1 1
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|+++.+.|.
T Consensus 76 ~~~~~~~--g~id~li~~ag~ 94 (253)
T PRK06172 76 EQTIAAY--GRLDYAFNNAGI 94 (253)
T ss_pred HHHHHHh--CCCCEEEECCCC
Confidence 2222222 268999998873
No 240
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.093 Score=46.14 Aligned_cols=78 Identities=31% Similarity=0.440 Sum_probs=52.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c--CCCE---EEeCCCcc-HH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GADV---CINYKTED-FV- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~--g~~~---~~~~~~~~-~~- 207 (335)
.+.++|| .|+++.+|.++++.+...|++|+++.+++++.+.+.+ . +... ..|-.+.+ ..
T Consensus 7 ~~k~~lI----------tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 76 (265)
T PRK07062 7 EGRVAVV----------TGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAA 76 (265)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHH
Confidence 4678999 9999999999999999999999999998876654431 1 1111 12333322 21
Q ss_pred --HHHHHHhCCCcccEEEeCCCh
Q 019790 208 --ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 --~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|++++++|.
T Consensus 77 ~~~~~~~~~--g~id~li~~Ag~ 97 (265)
T PRK07062 77 FAAAVEARF--GGVDMLVNNAGQ 97 (265)
T ss_pred HHHHHHHhc--CCCCEEEECCCC
Confidence 2222222 368999999873
No 241
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.36 E-value=0.16 Score=45.15 Aligned_cols=96 Identities=14% Similarity=0.135 Sum_probs=65.4
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+|+.....+..+....---.|.+++| .|.+..+|..++.++...|++|++..+..
T Consensus 138 ~PcTp~ai~~ll~~~~i~l~Gk~vvV----------IGrs~~VG~pla~lL~~~gatVtv~~s~t--------------- 192 (286)
T PRK14175 138 VPCTPLGIMEILKHADIDLEGKNAVV----------IGRSHIVGQPVSKLLLQKNASVTILHSRS--------------- 192 (286)
T ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE----------ECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------
Confidence 45555555555533322346888999 89777799999999999999999887431
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
. .+.+.+ +.+|+||.++|...+-.. +.++++-.++.+|...
T Consensus 193 ----~----~l~~~~--~~ADIVIsAvg~p~~i~~-~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 193 ----K----DMASYL--KDADVIVSAVGKPGLVTK-DVVKEGAVIIDVGNTP 233 (286)
T ss_pred ----h----hHHHHH--hhCCEEEECCCCCcccCH-HHcCCCcEEEEcCCCc
Confidence 1 122232 258999999998754222 4578887778888644
No 242
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.35 E-value=0.12 Score=45.28 Aligned_cols=78 Identities=29% Similarity=0.415 Sum_probs=52.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FV--- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~--- 207 (335)
.+.++|| .|++|.+|..+++.+...|++|++++++.++.+... ..+... . .|..+.. +.
T Consensus 11 ~~k~ilI----------tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~ 80 (259)
T PRK08213 11 SGKTALV----------TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLA 80 (259)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 4678999 999999999999999999999999999877665443 222221 2 2333322 21
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|.+|.++|.
T Consensus 81 ~~~~~~~--~~id~vi~~ag~ 99 (259)
T PRK08213 81 EETLERF--GHVDILVNNAGA 99 (259)
T ss_pred HHHHHHh--CCCCEEEECCCC
Confidence 2222222 368999998873
No 243
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.33 E-value=0.23 Score=43.40 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=68.4
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCccH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDF 206 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~ 206 (335)
...+..+-.++|- +| ..+|..++.+|+.+ +.+|+.+..+++..+.++ ..|....+.....+.
T Consensus 73 ~l~~~~~ak~iLE----------iG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a 140 (247)
T PLN02589 73 MLLKLINAKNTME----------IG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA 140 (247)
T ss_pred HHHHHhCCCEEEE----------Ee--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccH
Confidence 3445555668888 77 68899999999987 568999999988776664 345333333344445
Q ss_pred HHHHHHHhC----CCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790 207 VARVKEETG----GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 207 ~~~~~~~~~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 246 (335)
.+.+.++.. ...||+||-=... ..+..+++.|++||-++.
T Consensus 141 ~e~L~~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 141 LPVLDQMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred HHHHHHHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 555555432 1479999854443 235777899999987664
No 244
>PRK06484 short chain dehydrogenase; Validated
Probab=95.31 E-value=0.087 Score=51.35 Aligned_cols=80 Identities=24% Similarity=0.287 Sum_probs=54.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE---EEeCCCcc-HHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTED-FVARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~-~~~~~~~~ 213 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.++.++.+.+. +++... ..|..+.. ..+.+.+.
T Consensus 4 ~~k~~lI----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 4 QSRVVLV----------TGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CCeEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHH
Confidence 5678999 999999999999999999999999999888766554 454332 23333322 22222221
Q ss_pred h-CCCcccEEEeCCCh
Q 019790 214 T-GGKGVDVILDCMGA 228 (335)
Q Consensus 214 ~-~~~~~d~vid~~g~ 228 (335)
. ...++|+++++.|.
T Consensus 74 ~~~~g~iD~li~nag~ 89 (520)
T PRK06484 74 HREFGRIDVLVNNAGV 89 (520)
T ss_pred HHHhCCCCEEEECCCc
Confidence 1 11368999998863
No 245
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.30 E-value=0.11 Score=45.27 Aligned_cols=80 Identities=23% Similarity=0.300 Sum_probs=51.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCccHHHH-H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVAR-V 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~-~ 210 (335)
.+.++|| +|++|.+|..+++.+...|++|+++.+++++.+.+. +.+... . .|..+...... +
T Consensus 9 ~~k~vlI----------tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~ 78 (255)
T PRK07523 9 TGRRALV----------TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAI 78 (255)
T ss_pred CCCEEEE----------ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHH
Confidence 4678999 999999999999999889999999999877654432 223211 1 23333222111 1
Q ss_pred HHH-hCCCcccEEEeCCCh
Q 019790 211 KEE-TGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~-~~~~~~d~vid~~g~ 228 (335)
.+. ....++|++|.++|.
T Consensus 79 ~~~~~~~~~~d~li~~ag~ 97 (255)
T PRK07523 79 DAFEAEIGPIDILVNNAGM 97 (255)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 111 112368999998873
No 246
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.29 E-value=0.11 Score=45.19 Aligned_cols=73 Identities=22% Similarity=0.353 Sum_probs=47.5
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE-E--eCCCcc-HHHHHHHHh-CCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-I--NYKTED-FVARVKEET-GGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~-~--~~~~~~-~~~~~~~~~-~~~~~d~vid~~g~ 228 (335)
.|++|.+|.+++..+...|++|+++++++++.+.+.. ++.... + |-.+.. +.+.+.+.. ...++|.++.++|.
T Consensus 6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~ 84 (248)
T PRK10538 6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGL 84 (248)
T ss_pred ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 9999999999999999999999999999887666543 333221 2 222221 222222211 11368999998763
No 247
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.11 Score=45.09 Aligned_cols=78 Identities=23% Similarity=0.313 Sum_probs=51.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--CCCE-EE--eCCCccH-HH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GADV-CI--NYKTEDF-VA--- 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--g~~~-~~--~~~~~~~-~~--- 208 (335)
++.++|| .|++|.+|..+++.+...|++|+++.++.+..+...+ . +... .+ |-.+... .+
T Consensus 4 ~~k~~lI----------tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (252)
T PRK06138 4 AGRVAIV----------TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVD 73 (252)
T ss_pred CCcEEEE----------eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 3568999 9999999999999888889999999998776544332 2 2221 22 3222221 11
Q ss_pred HHHHHhCCCcccEEEeCCCh
Q 019790 209 RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|+++.|+|.
T Consensus 74 ~i~~~~--~~id~vi~~ag~ 91 (252)
T PRK06138 74 FVAARW--GRLDVLVNNAGF 91 (252)
T ss_pred HHHHHc--CCCCEEEECCCC
Confidence 222222 368999998873
No 248
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.29 E-value=0.11 Score=45.07 Aligned_cols=40 Identities=28% Similarity=0.323 Sum_probs=34.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 188 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~ 188 (335)
.+.++|| +|++|.+|..++..+...|++|++++|+.++..
T Consensus 5 ~~~~ilI----------tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~ 44 (251)
T PRK12826 5 EGRVALV----------TGAARGIGRAIAVRLAADGAEVIVVDICGDDAA 44 (251)
T ss_pred CCCEEEE----------cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3568999 999999999999998888999999999865543
No 249
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.28 Score=42.38 Aligned_cols=36 Identities=25% Similarity=0.316 Sum_probs=31.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
++.++|| +|+++.+|..++..+...|++++++.++.
T Consensus 4 ~~~~vlI----------tG~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 4 SNKVAIV----------TGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 4568999 99999999999999999999988877643
No 250
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=95.27 E-value=0.35 Score=36.77 Aligned_cols=98 Identities=16% Similarity=0.267 Sum_probs=62.9
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH----cCCC--EEEeCCCcc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGAD--VCINYKTED 205 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~ 205 (335)
....+.++++++- .| +|. |..+..+++..+ .+|++++.++...+.++. .+.. .++..+...
T Consensus 13 ~~~~~~~~~~vld----------lG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T TIGR02469 13 SKLRLRPGDVLWD----------IG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE 80 (124)
T ss_pred HHcCCCCCCEEEE----------eC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc
Confidence 3445667777777 77 444 888888888874 699999999887777643 3332 222221111
Q ss_pred HHHHHHHHhCCCcccEEEeCCChh----hHHHhhccccCCCEEEEE
Q 019790 206 FVARVKEETGGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~ 247 (335)
..... ...||+|+-..+.. .+..+.+.|+++|+++..
T Consensus 81 ---~~~~~--~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 81 ---ALEDS--LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred ---cChhh--cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 01111 13699999765432 357789999999999864
No 251
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.11 Score=46.29 Aligned_cols=77 Identities=25% Similarity=0.335 Sum_probs=51.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV--- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~--- 207 (335)
.+.++|| +|+++.+|.+++..+...|++|+++.+++++.+.+. ..+... .+ |-.+.. +.
T Consensus 5 ~~k~vlV----------TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~ 74 (275)
T PRK05876 5 PGRGAVI----------TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLA 74 (275)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 4678999 999999999999999999999999998876655432 233322 12 322221 11
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|++|+++|
T Consensus 75 ~~~~~~~--g~id~li~nAg 92 (275)
T PRK05876 75 DEAFRLL--GHVDVVFSNAG 92 (275)
T ss_pred HHHHHHc--CCCCEEEECCC
Confidence 2222222 36899999887
No 252
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.25 E-value=0.071 Score=47.33 Aligned_cols=81 Identities=31% Similarity=0.413 Sum_probs=54.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC------EEEeCCCccHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD------VCINYKTEDFV 207 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~------~~~~~~~~~~~ 207 (335)
-.|..+|| +|++.++|.+++..+-..|++|+++.+++++.+.... .+.. ...|-.+....
T Consensus 6 l~gkvalV----------TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 75 (270)
T KOG0725|consen 6 LAGKVALV----------TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDV 75 (270)
T ss_pred CCCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHH
Confidence 45778899 9999999999999999999999999999887655542 2221 12233322222
Q ss_pred HHHHH-HhC--CCcccEEEeCCCh
Q 019790 208 ARVKE-ETG--GKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~-~~~--~~~~d~vid~~g~ 228 (335)
+.+.+ ... .+++|+.+++.|.
T Consensus 76 ~~l~~~~~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 76 EKLVEFAVEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCc
Confidence 22222 111 2369999998874
No 253
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.21 Score=43.71 Aligned_cols=78 Identities=23% Similarity=0.433 Sum_probs=52.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCC-EEE--eCCCccHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GAD-VCI--NYKTEDFVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~-~~~--~~~~~~~~~~~ 210 (335)
.+.++|| .|+++.+|..+++.+...|++|+++++++++.+.+.+ + +.. ..+ |-.+..-...+
T Consensus 6 ~~k~vlI----------tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~ 75 (259)
T PRK06125 6 AGKRVLI----------TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQL 75 (259)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence 3678999 9999999999999999999999999998776655332 1 222 122 32222222222
Q ss_pred HHHhCCCcccEEEeCCCh
Q 019790 211 KEETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~ 228 (335)
.+.. .++|++|.|.|.
T Consensus 76 ~~~~--g~id~lv~~ag~ 91 (259)
T PRK06125 76 AAEA--GDIDILVNNAGA 91 (259)
T ss_pred HHHh--CCCCEEEECCCC
Confidence 2222 368999998873
No 254
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.20 E-value=0.28 Score=42.56 Aligned_cols=101 Identities=19% Similarity=0.265 Sum_probs=60.9
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhH----HHHHHcCCCE-EE--eCCCcc-H---H
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADV-CI--NYKTED-F---V 207 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~----~~~~~~g~~~-~~--~~~~~~-~---~ 207 (335)
+.++|| .|++|.+|..++..+...|++|+...++. ++. ..+++.+... .+ |..+.. . .
T Consensus 6 ~~~vli----------tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (252)
T PRK06077 6 DKVVVV----------TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLA 75 (252)
T ss_pred CcEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHH
Confidence 568999 99999999999998888999988776532 222 1223333322 22 322221 1 1
Q ss_pred HHHHHHhCCCcccEEEeCCCh----------h-h---------------HHHhhccccCCCEEEEEeccCC
Q 019790 208 ARVKEETGGKGVDVILDCMGA----------S-Y---------------FQRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~----------~-~---------------~~~~~~~l~~~G~~v~~g~~~~ 252 (335)
+.+.+.. .++|.+|.++|. . . ...+.+.++..|+++.++....
T Consensus 76 ~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 76 KATIDRY--GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred HHHHHHc--CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 2222222 368999999873 0 0 1233455566789998876554
No 255
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.13 Score=44.79 Aligned_cols=78 Identities=19% Similarity=0.312 Sum_probs=50.5
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEE--eCCCcc-HHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTED-FVARVK 211 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~~~~~ 211 (335)
+.++|| .|+++.+|..+++.+...|++|+++++++++.+.+.+ .+.. ..+ |-.+.. +.+.+.
T Consensus 1 ~k~~lI----------tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 70 (252)
T PRK07677 1 EKVVII----------TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVE 70 (252)
T ss_pred CCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 357889 9999999999999999999999999998776654432 2222 122 333322 222222
Q ss_pred HHh-CCCcccEEEeCCC
Q 019790 212 EET-GGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~-~~~~~d~vid~~g 227 (335)
+.. ...++|++++++|
T Consensus 71 ~~~~~~~~id~lI~~ag 87 (252)
T PRK07677 71 QIDEKFGRIDALINNAA 87 (252)
T ss_pred HHHHHhCCccEEEECCC
Confidence 211 1136899999886
No 256
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.15 E-value=0.14 Score=44.77 Aligned_cols=76 Identities=20% Similarity=0.360 Sum_probs=51.5
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE-EE--eCCCcc-HHH---HHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CI--NYKTED-FVA---RVK 211 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~-~~--~~~~~~-~~~---~~~ 211 (335)
+.++|| +|+++.+|..++..+...|++|++++++.++.+.+.+ ++... .+ |-.+.. ... .+.
T Consensus 6 ~~~vlI----------tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 6 GKVALL----------TGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred CCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 568999 9999999999999999999999999998887665543 33221 12 322222 222 222
Q ss_pred HHhCCCcccEEEeCCC
Q 019790 212 EETGGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g 227 (335)
+.. .++|+++.+.|
T Consensus 76 ~~~--~~id~li~~ag 89 (257)
T PRK07067 76 ERF--GGIDILFNNAA 89 (257)
T ss_pred HHc--CCCCEEEECCC
Confidence 222 36899999876
No 257
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.13 Score=44.87 Aligned_cols=78 Identities=22% Similarity=0.260 Sum_probs=49.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HH----HHHHcCCCE-EE--eCCCcc-HHH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-CI--NYKTED-FVA- 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~----~~~~~g~~~-~~--~~~~~~-~~~- 208 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.++.+. .+ .++..+... .+ |-.+.. ..+
T Consensus 7 ~~k~~lV----------tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~ 76 (254)
T PRK06114 7 DGQVAFV----------TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAA 76 (254)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4668999 9999999999999999999999999876432 22 222333222 12 222221 222
Q ss_pred --HHHHHhCCCcccEEEeCCCh
Q 019790 209 --RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 --~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|++|.|.|.
T Consensus 77 ~~~~~~~~--g~id~li~~ag~ 96 (254)
T PRK06114 77 VARTEAEL--GALTLAVNAAGI 96 (254)
T ss_pred HHHHHHHc--CCCCEEEECCCC
Confidence 222222 368999999873
No 258
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.14 E-value=0.1 Score=45.64 Aligned_cols=77 Identities=21% Similarity=0.251 Sum_probs=49.8
Q ss_pred CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC--EE--EeCCCcc-H---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VC--INYKTED-F---VA 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~-~---~~ 208 (335)
.+.++|| .|++ +++|.++++.+-..|++|+++.++++..+.++++... .. .|-.+.. . .+
T Consensus 6 ~~k~~lI----------tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 6 SGKKIVV----------MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CCCEEEE----------eCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHH
Confidence 4678999 9988 7999999999988999999998875434444443211 11 2332221 2 22
Q ss_pred HHHHHhCCCcccEEEeCCC
Q 019790 209 RVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.. .++|++++++|
T Consensus 76 ~~~~~~--g~iD~lv~nAg 92 (252)
T PRK06079 76 TIKERV--GKIDGIVHAIA 92 (252)
T ss_pred HHHHHh--CCCCEEEEccc
Confidence 222222 36999999887
No 259
>PRK09242 tropinone reductase; Provisional
Probab=95.14 E-value=0.14 Score=44.67 Aligned_cols=78 Identities=22% Similarity=0.352 Sum_probs=52.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c--CCCE-E--EeCCCcc-HH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GADV-C--INYKTED-FV- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~--g~~~-~--~~~~~~~-~~- 207 (335)
.+.++|| .|+++.+|..++..+...|++|++++++.+..+.+.+ . +.+. . .|..+.+ ..
T Consensus 8 ~~k~~lI----------tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~ 77 (257)
T PRK09242 8 DGQTALI----------TGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRA 77 (257)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence 4678999 9999999999999999999999999998876654432 1 2221 1 1333322 11
Q ss_pred --HHHHHHhCCCcccEEEeCCCh
Q 019790 208 --ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 --~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|+++.+.|.
T Consensus 78 ~~~~~~~~~--g~id~li~~ag~ 98 (257)
T PRK09242 78 ILDWVEDHW--DGLHILVNNAGG 98 (257)
T ss_pred HHHHHHHHc--CCCCEEEECCCC
Confidence 2222222 369999999974
No 260
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.14 E-value=0.093 Score=43.00 Aligned_cols=94 Identities=20% Similarity=0.233 Sum_probs=62.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC-----------------CccHHHHHHHHhCCCc
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-----------------TEDFVARVKEETGGKG 218 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~~~~~~~~~~~~~~~ 218 (335)
+| +|.+|.-|+.+++.+|++|++.+...++.+.....+...+.... .......+.+.. ..
T Consensus 26 ~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i--~~ 102 (168)
T PF01262_consen 26 TG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAEFI--AP 102 (168)
T ss_dssp ES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHHHH--HH
T ss_pred EC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHHHH--hh
Confidence 66 89999999999999999999999999888888877765433210 122233334433 25
Q ss_pred ccEEEeCC---Chh--h--HHHhhccccCCCEEEEEeccCC
Q 019790 219 VDVILDCM---GAS--Y--FQRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 219 ~d~vid~~---g~~--~--~~~~~~~l~~~G~~v~~g~~~~ 252 (335)
+|+++.+. +.. . ....++.|+++.-++.+....+
T Consensus 103 ~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 103 ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp -SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 89998533 211 1 2667888998888888754443
No 261
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.14 Score=43.97 Aligned_cols=71 Identities=15% Similarity=0.253 Sum_probs=47.8
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~g 227 (335)
.|+++.+|.++++.+...|++|+++.+++++.+.+. +.+...+ .|-.+....+.+.+... ..+|+++++.|
T Consensus 6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 999999999999999889999999999887766553 3443322 23333322222333222 25899998865
No 262
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.15 Score=44.60 Aligned_cols=77 Identities=21% Similarity=0.230 Sum_probs=50.2
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCC--C-EE--EeCCCcc-HHHHHHHH
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VC--INYKTED-FVARVKEE 213 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~--~-~~--~~~~~~~-~~~~~~~~ 213 (335)
.++|| +|+++.+|..++..+...|++|++++++.++.+.+.+ +.. + .. .|-.+.. +.+.+.+.
T Consensus 3 ~~vlI----------tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~ 72 (257)
T PRK07024 3 LKVFI----------TGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72 (257)
T ss_pred CEEEE----------EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence 57899 9999999999999999899999999998877655433 211 1 11 2333322 22222222
Q ss_pred hC-CCcccEEEeCCC
Q 019790 214 TG-GKGVDVILDCMG 227 (335)
Q Consensus 214 ~~-~~~~d~vid~~g 227 (335)
.. ...+|+++.++|
T Consensus 73 ~~~~g~id~lv~~ag 87 (257)
T PRK07024 73 IAAHGLPDVVIANAG 87 (257)
T ss_pred HHhCCCCCEEEECCC
Confidence 11 125899999886
No 263
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.11 E-value=0.18 Score=43.60 Aligned_cols=102 Identities=21% Similarity=0.265 Sum_probs=69.5
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHc----CCCE-E-EeCCCcc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDL----GADV-C-INYKTED 205 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~----g~~~-~-~~~~~~~ 205 (335)
......+|+++|= .+ ++.|-.+..+++..| ++|++++-|+..++.+++- +... - +..+..
T Consensus 45 ~~~~~~~g~~vLD----------va--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe- 111 (238)
T COG2226 45 SLLGIKPGDKVLD----------VA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAE- 111 (238)
T ss_pred HhhCCCCCCEEEE----------ec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechh-
Confidence 4445568999987 54 678888889999886 4899999999998888642 2211 1 111111
Q ss_pred HHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEeccCC
Q 019790 206 FVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~ 252 (335)
.+- ...+.||++.-+.|- ..+.++.+.|+|+|+++.+.....
T Consensus 112 ---~LP--f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 112 ---NLP--FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred ---hCC--CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 111 233578888776663 346889999999999988866553
No 264
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.16 Score=44.10 Aligned_cols=77 Identities=17% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCccH----H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTEDF----V 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~----~ 207 (335)
.+.++|| +|++|.+|..+++.+...|++|+++.++++..+.+. +.+.. .. .|..+..- .
T Consensus 5 ~~k~vlI----------tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (250)
T PRK07774 5 DDKVAIV----------TGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMA 74 (250)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 4568999 999999999999999889999999999876554332 22222 11 23332221 1
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|++|.++|
T Consensus 75 ~~~~~~~--~~id~vi~~ag 92 (250)
T PRK07774 75 DATVSAF--GGIDYLVNNAA 92 (250)
T ss_pred HHHHHHh--CCCCEEEECCC
Confidence 2222222 25899999887
No 265
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.15 Score=46.07 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=35.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 189 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 189 (335)
.+.++|| .|+++.+|..+++.+...|++|++++++.++.+.
T Consensus 15 ~~k~vlI----------tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~ 55 (306)
T PRK06197 15 SGRVAVV----------TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKA 55 (306)
T ss_pred CCCEEEE----------cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 5678999 9999999999999888889999999998776543
No 266
>PRK08264 short chain dehydrogenase; Validated
Probab=95.09 E-value=0.18 Score=43.45 Aligned_cols=75 Identities=25% Similarity=0.416 Sum_probs=50.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCE-E--EeCCCccHHHHHHHHh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV-C--INYKTEDFVARVKEET 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~~~~~ 214 (335)
.+.++|| +||+|.+|..+++.+...|+ +|+++.++.++.+. .+... . .|..+..-...+.+..
T Consensus 5 ~~~~vlI----------tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~ 71 (238)
T PRK08264 5 KGKVVLV----------TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA 71 (238)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc
Confidence 4568999 99999999999999999999 99999988766543 22221 1 2333322222222222
Q ss_pred CCCcccEEEeCCCh
Q 019790 215 GGKGVDVILDCMGA 228 (335)
Q Consensus 215 ~~~~~d~vid~~g~ 228 (335)
.++|++|.++|.
T Consensus 72 --~~id~vi~~ag~ 83 (238)
T PRK08264 72 --SDVTILVNNAGI 83 (238)
T ss_pred --CCCCEEEECCCc
Confidence 358999998876
No 267
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.09 E-value=0.07 Score=51.65 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhC
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 215 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 215 (335)
.+.++++++| +| .|..|++++++++..|++|++.+..+.+.+.+++.|.... .... ..+.+
T Consensus 8 ~~~~~~~v~V----------~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~--~~~~l----- 68 (488)
T PRK03369 8 PLLPGAPVLV----------AG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD--AVQQI----- 68 (488)
T ss_pred cccCCCeEEE----------Ec-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc--hHhHh-----
Confidence 3567889999 88 8999999999999999999999977666666667776433 2111 11122
Q ss_pred CCcccEEEeCCCh
Q 019790 216 GKGVDVILDCMGA 228 (335)
Q Consensus 216 ~~~~d~vid~~g~ 228 (335)
..+|+|+.+.|-
T Consensus 69 -~~~D~VV~SpGi 80 (488)
T PRK03369 69 -ADYALVVTSPGF 80 (488)
T ss_pred -hcCCEEEECCCC
Confidence 247999998874
No 268
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.12 Score=44.67 Aligned_cols=71 Identities=15% Similarity=0.075 Sum_probs=45.8
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-E--EEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V--CINYKTEDFVARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 227 (335)
.|++|.+|..++..+...|++|++++|++++.+.+.+.+.. . ..|-.+.+-.+.+.+.... ..|.++.++|
T Consensus 7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~d~~i~~ag 80 (240)
T PRK06101 7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF-IPELWIFNAG 80 (240)
T ss_pred EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc-CCCEEEEcCc
Confidence 99999999998888888899999999998887766543311 1 2333333222223333222 3577666654
No 269
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.095 Score=45.18 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=52.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV--- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~--- 207 (335)
.+.+++| .|+++++|.+.+..+...|++|+++.+++++.+.+. +.+... .+ |-.+.. ..
T Consensus 4 ~~k~~lV----------tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~ 73 (227)
T PRK08862 4 KSSIILI----------TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLF 73 (227)
T ss_pred CCeEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHH
Confidence 4678999 999999999999999999999999999888765543 334332 22 222222 22
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+..+ .++|++|.++|
T Consensus 74 ~~~~~~~g-~~iD~li~nag 92 (227)
T PRK08862 74 DAIEQQFN-RAPDVLVNNWT 92 (227)
T ss_pred HHHHHHhC-CCCCEEEECCc
Confidence 22222222 26999999986
No 270
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.08 E-value=0.15 Score=45.20 Aligned_cols=79 Identities=14% Similarity=0.221 Sum_probs=51.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~ 210 (335)
.+.+++| .|+++.+|.+++..+...|++|+++.++++..+.+. ..+... . .|..+.. ....+
T Consensus 9 ~~k~vlV----------tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 78 (278)
T PRK08277 9 KGKVAVI----------TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQAR 78 (278)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 4678999 999999999999999999999999999876554432 223221 1 2332222 22212
Q ss_pred HHHhC-CCcccEEEeCCC
Q 019790 211 KEETG-GKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~~-~~~~d~vid~~g 227 (335)
.+... ..++|++|.++|
T Consensus 79 ~~~~~~~g~id~li~~ag 96 (278)
T PRK08277 79 QQILEDFGPCDILINGAG 96 (278)
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 21111 136899999887
No 271
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.08 E-value=0.12 Score=44.80 Aligned_cols=101 Identities=18% Similarity=0.285 Sum_probs=71.2
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHH----HcCCCEEEeCCCcc
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTED 205 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~ 205 (335)
....++.+|++|+- .| .+.|.++..+|+..|. +|+.....++..+.++ +++....+.....+
T Consensus 87 ~~~~gi~pg~rVlE----------AG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D 154 (256)
T COG2519 87 VARLGISPGSRVLE----------AG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD 154 (256)
T ss_pred HHHcCCCCCCEEEE----------cc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc
Confidence 35689999999999 55 5578889999998875 8999998887766664 34433222223333
Q ss_pred HHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790 206 FVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g 248 (335)
. .+...+..+|.+|-=... ..++.+.+.|+++|.++.+-
T Consensus 155 v----~~~~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 155 V----REGIDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred c----cccccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 3 333333479988765555 45789999999999998874
No 272
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.08 E-value=0.12 Score=45.29 Aligned_cols=79 Identities=23% Similarity=0.320 Sum_probs=50.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH---HcCCCE---EEeCCCcc-HHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV---CINYKTED-FVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~-~~~~~~ 211 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.+++...+... ..+.+. ..|..+.. ..+.+.
T Consensus 7 ~~k~vlV----------tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK12823 7 AGKVVVV----------TGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMA 76 (260)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHH
Confidence 4578999 999999999999999999999999998754332222 233322 22433322 222222
Q ss_pred HHhC-CCcccEEEeCCC
Q 019790 212 EETG-GKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~~-~~~~d~vid~~g 227 (335)
+... ..++|+++.++|
T Consensus 77 ~~~~~~~~id~lv~nAg 93 (260)
T PRK12823 77 AAVEAFGRIDVLINNVG 93 (260)
T ss_pred HHHHHcCCCeEEEECCc
Confidence 2111 136899999886
No 273
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.05 E-value=0.08 Score=44.62 Aligned_cols=96 Identities=16% Similarity=0.088 Sum_probs=58.7
Q ss_pred cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV 210 (335)
Q Consensus 135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~ 210 (335)
....++.++|- .| ++.|..+..+++. |.+|++++.+++..+.+++ .+...+ .....++
T Consensus 26 l~~~~~~~vLD----------iG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~---- 87 (197)
T PRK11207 26 VKVVKPGKTLD----------LG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDL---- 87 (197)
T ss_pred cccCCCCcEEE----------EC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecCh----
Confidence 34456678888 66 4457788888875 8899999999887776653 222111 1111111
Q ss_pred HHHhCCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEe
Q 019790 211 KEETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g 248 (335)
.+..-...||+|+.+..- ..+..+.+.|+++|.++.+.
T Consensus 88 ~~~~~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 88 NNLTFDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred hhCCcCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 111112369999875431 22466788899999975543
No 274
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.04 E-value=0.26 Score=43.21 Aligned_cols=79 Identities=14% Similarity=0.225 Sum_probs=48.0
Q ss_pred CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecCh---hhHHHHH-Hc-CCCE-E--EeCCCcc-HH
Q 019790 139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DL-GADV-C--INYKTED-FV 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~-~~-g~~~-~--~~~~~~~-~~ 207 (335)
.+.+++| +|++ +++|.++++.+-..|++|+++.++. ++.+.+. ++ +... . .|-.+.. ..
T Consensus 6 ~~k~~lI----------tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (257)
T PRK08594 6 EGKTYVV----------MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEIT 75 (257)
T ss_pred CCCEEEE----------ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHH
Confidence 4678899 9986 7999999999988999999987643 3333333 23 2211 1 2333322 22
Q ss_pred HHHHHHhC-CCcccEEEeCCC
Q 019790 208 ARVKEETG-GKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~-~~~~d~vid~~g 227 (335)
+.+.+... -.++|++++|+|
T Consensus 76 ~~~~~~~~~~g~ld~lv~nag 96 (257)
T PRK08594 76 ACFETIKEEVGVIHGVAHCIA 96 (257)
T ss_pred HHHHHHHHhCCCccEEEECcc
Confidence 22222211 136999999876
No 275
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.13 Score=45.51 Aligned_cols=41 Identities=32% Similarity=0.474 Sum_probs=35.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 189 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 189 (335)
++.++|| .|++|.+|..+++.+...|++|+++.+++++.+.
T Consensus 6 ~~k~vlI----------tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~ 46 (276)
T PRK05875 6 QDRTYLV----------TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA 46 (276)
T ss_pred CCCEEEE----------ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 3578999 9999999999999999999999999988766543
No 276
>PRK08589 short chain dehydrogenase; Validated
Probab=95.03 E-value=0.12 Score=45.76 Aligned_cols=77 Identities=21% Similarity=0.313 Sum_probs=49.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE---EEeCCCcc-H---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV---CINYKTED-F---VA 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~-~---~~ 208 (335)
.+.++|| .|+++.+|.+++..+...|++|+++.++++..+.+.+ .+... ..|-.+.. . .+
T Consensus 5 ~~k~vlI----------tGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 74 (272)
T PRK08589 5 ENKVAVI----------TGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFAS 74 (272)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHH
Confidence 4678999 9999999999999988899999999988332222222 23221 22333322 2 22
Q ss_pred HHHHHhCCCcccEEEeCCC
Q 019790 209 RVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.. .++|++|+++|
T Consensus 75 ~~~~~~--g~id~li~~Ag 91 (272)
T PRK08589 75 EIKEQF--GRVDVLFNNAG 91 (272)
T ss_pred HHHHHc--CCcCEEEECCC
Confidence 222222 36899999886
No 277
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.16 Score=44.89 Aligned_cols=78 Identities=22% Similarity=0.271 Sum_probs=51.6
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE---EEeCCCcc-HHHHHHHHh-
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV---CINYKTED-FVARVKEET- 214 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~-~~~~~~~~~- 214 (335)
.++|| +|++|.+|..+++.+...|++|+++.+++++.+.+++ .+... ..|..+.. ..+.+.+..
T Consensus 3 k~vlV----------tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (276)
T PRK06482 3 KTWFI----------TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA 72 (276)
T ss_pred CEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46889 9999999999999988899999999999887766654 22221 12333322 222222211
Q ss_pred CCCcccEEEeCCCh
Q 019790 215 GGKGVDVILDCMGA 228 (335)
Q Consensus 215 ~~~~~d~vid~~g~ 228 (335)
...++|++|.++|.
T Consensus 73 ~~~~id~vi~~ag~ 86 (276)
T PRK06482 73 ALGRIDVVVSNAGY 86 (276)
T ss_pred HcCCCCEEEECCCC
Confidence 12368999998863
No 278
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.16 Score=44.51 Aligned_cols=77 Identities=19% Similarity=0.324 Sum_probs=50.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE---EEeCCCcc-HH---H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV---CINYKTED-FV---A 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~-~~---~ 208 (335)
.+.++|| +|+++.+|..++..+...|++|+++.++++..+..++ .+... ..|..+.. .. +
T Consensus 5 ~~~~~lI----------tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 74 (263)
T PRK08226 5 TGKTALI----------TGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIK 74 (263)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH
Confidence 4578999 9999999999999999999999999988754333322 23221 12333322 11 1
Q ss_pred HHHHHhCCCcccEEEeCCC
Q 019790 209 RVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.. .++|++|.++|
T Consensus 75 ~~~~~~--~~id~vi~~ag 91 (263)
T PRK08226 75 RAKEKE--GRIDILVNNAG 91 (263)
T ss_pred HHHHHc--CCCCEEEECCC
Confidence 222222 36899999887
No 279
>PRK08643 acetoin reductase; Validated
Probab=94.99 E-value=0.16 Score=44.32 Aligned_cols=77 Identities=19% Similarity=0.280 Sum_probs=50.7
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCccH-H---H
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF-V---A 208 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~-~---~ 208 (335)
+.++|| +|+++.+|..+++.+...|++|+++.++.++.+.+. ..+... .+ |-.+... . +
T Consensus 2 ~k~~lI----------tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 71 (256)
T PRK08643 2 SKVALV----------TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVR 71 (256)
T ss_pred CCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 457889 999999999999999999999999999876654443 223222 12 3333221 1 2
Q ss_pred HHHHHhCCCcccEEEeCCCh
Q 019790 209 RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|++|.|+|.
T Consensus 72 ~~~~~~--~~id~vi~~ag~ 89 (256)
T PRK08643 72 QVVDTF--GDLNVVVNNAGV 89 (256)
T ss_pred HHHHHc--CCCCEEEECCCC
Confidence 222222 368999998863
No 280
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.12 Score=44.42 Aligned_cols=80 Identities=26% Similarity=0.395 Sum_probs=51.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC---CCEEE--eCCCc-cHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTE-DFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~-~~~~~~~ 211 (335)
.+.+++| +|++|.+|..+++.+...|++|+++++++++.+.+. ++. .-..+ |..+. .+.+.+.
T Consensus 5 ~~~~ilI----------tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~ 74 (237)
T PRK07326 5 KGKVALI----------TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVD 74 (237)
T ss_pred CCCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHH
Confidence 3578999 999999999999988888999999999887665443 332 11122 32322 2222222
Q ss_pred HHhC-CCcccEEEeCCCh
Q 019790 212 EETG-GKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~~-~~~~d~vid~~g~ 228 (335)
+... ..++|++|.+.|.
T Consensus 75 ~~~~~~~~~d~vi~~ag~ 92 (237)
T PRK07326 75 AIVAAFGGLDVLIANAGV 92 (237)
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 2211 1368999998763
No 281
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.98 E-value=0.17 Score=44.17 Aligned_cols=78 Identities=18% Similarity=0.350 Sum_probs=51.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHH--
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVA-- 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~-- 208 (335)
.+.++|| +||++.+|.+++..+...|++|+++.+++++.+.+. ..+... .+ |-.+.+ +.+
T Consensus 8 ~~k~~lI----------tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (254)
T PRK08085 8 AGKNILI----------TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAI 77 (254)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHH
Confidence 4678999 999999999999999999999999999876654432 223221 22 322222 111
Q ss_pred -HHHHHhCCCcccEEEeCCCh
Q 019790 209 -RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 -~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|+++.+.|.
T Consensus 78 ~~~~~~~--~~id~vi~~ag~ 96 (254)
T PRK08085 78 EHIEKDI--GPIDVLINNAGI 96 (254)
T ss_pred HHHHHhc--CCCCEEEECCCc
Confidence 222222 368999998873
No 282
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.19 Score=43.34 Aligned_cols=80 Identities=20% Similarity=0.219 Sum_probs=51.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-EE--eCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~-~~~~~ 210 (335)
...++|| .|++|.+|..++..+...|++|+++++++++.+.+.+ .+... .+ |-.+.+ ....+
T Consensus 5 ~~k~vlI----------tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 74 (241)
T PRK07454 5 SMPRALI----------TGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGI 74 (241)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH
Confidence 4567899 9999999999999999999999999998876554432 22222 22 222222 11222
Q ss_pred HHHh-CCCcccEEEeCCCh
Q 019790 211 KEET-GGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~-~~~~~d~vid~~g~ 228 (335)
.+.. ...+.|+++.++|.
T Consensus 75 ~~~~~~~~~id~lv~~ag~ 93 (241)
T PRK07454 75 AELLEQFGCPDVLINNAGM 93 (241)
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 2211 11358999999873
No 283
>PRK05717 oxidoreductase; Validated
Probab=94.95 E-value=0.18 Score=44.06 Aligned_cols=80 Identities=24% Similarity=0.258 Sum_probs=51.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCE-E--EeCCCcc-HHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADV-C--INYKTED-FVARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~-~--~~~~~~~-~~~~~~~~ 213 (335)
.+.++|| +|++|.+|..++..+...|++|+++.++..+.+.. +.++... . .|..+.. ..+.+.+.
T Consensus 9 ~~k~vlI----------tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 9 NGRVALV----------TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred CCCEEEE----------eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4678999 99999999999999988999999998876655443 3344221 1 2333322 11112222
Q ss_pred hC-CCcccEEEeCCCh
Q 019790 214 TG-GKGVDVILDCMGA 228 (335)
Q Consensus 214 ~~-~~~~d~vid~~g~ 228 (335)
.. ..++|++|.++|.
T Consensus 79 ~~~~g~id~li~~ag~ 94 (255)
T PRK05717 79 LGQFGRLDALVCNAAI 94 (255)
T ss_pred HHHhCCCCEEEECCCc
Confidence 11 1258999998873
No 284
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.92 E-value=0.18 Score=44.40 Aligned_cols=78 Identities=22% Similarity=0.323 Sum_probs=51.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCccH----H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDF----V 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~----~ 207 (335)
.+.++|| .|+++.+|..++..+...|++|+++.+++++.+.+. ..+... . .|-.+..- .
T Consensus 9 ~~k~~lI----------tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (265)
T PRK07097 9 KGKIALI----------TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMV 78 (265)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4678999 999999999999988889999999998877654432 234322 1 23332221 1
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
..+.+.. .++|.++.++|.
T Consensus 79 ~~~~~~~--~~id~li~~ag~ 97 (265)
T PRK07097 79 SQIEKEV--GVIDILVNNAGI 97 (265)
T ss_pred HHHHHhC--CCCCEEEECCCC
Confidence 2222222 368999998873
No 285
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.90 E-value=0.18 Score=44.05 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=49.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh--hHHHHHHcCCCE-E--EeCCCc-cH---HHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADV-C--INYKTE-DF---VAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~g~~~-~--~~~~~~-~~---~~~ 209 (335)
.+.++|| .|+++.+|.++++.+...|++|+.+.++.. ..+.+++.+... . .|-.+. .. .+.
T Consensus 9 ~~k~~lI----------tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 78 (253)
T PRK08993 9 EGKVAVV----------TGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLER 78 (253)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 3678999 999999999999999999999998765432 223333444222 1 232221 12 222
Q ss_pred HHHHhCCCcccEEEeCCCh
Q 019790 210 VKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.. .++|+++.|+|.
T Consensus 79 ~~~~~--~~~D~li~~Ag~ 95 (253)
T PRK08993 79 AVAEF--GHIDILVNNAGL 95 (253)
T ss_pred HHHHh--CCCCEEEECCCC
Confidence 22222 368999998873
No 286
>PRK12828 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.13 Score=44.23 Aligned_cols=78 Identities=18% Similarity=0.273 Sum_probs=50.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH----HHHcCCCEE-EeCCCcc-HH---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVC-INYKTED-FV---AR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~----~~~~g~~~~-~~~~~~~-~~---~~ 209 (335)
++.++|| +|++|.+|..+++.+...|++|++++++.++... +...+...+ .|-.+.. +. +.
T Consensus 6 ~~k~vlI----------tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (239)
T PRK12828 6 QGKVVAI----------TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDE 75 (239)
T ss_pred CCCEEEE----------ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHH
Confidence 3678999 9999999999999998889999999997665332 222333221 2322222 11 12
Q ss_pred HHHHhCCCcccEEEeCCCh
Q 019790 210 VKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.. .++|+++.++|.
T Consensus 76 ~~~~~--~~~d~vi~~ag~ 92 (239)
T PRK12828 76 VNRQF--GRLDALVNIAGA 92 (239)
T ss_pred HHHHh--CCcCEEEECCcc
Confidence 22222 268999998763
No 287
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.17 Score=44.61 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=46.1
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCccHHHHHHHHh--CCCcccEEEeCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTEDFVARVKEET--GGKGVDVILDCM 226 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~~~~~~~~~~--~~~~~d~vid~~ 226 (335)
+|++|.+|..++..+...|++|++++++.++.+.+. ..+.+.. + |-.+..-...+.+.. ...++|++|.++
T Consensus 6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~a 85 (270)
T PRK05650 6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNA 85 (270)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 999999999999998889999999999877655432 2333321 2 222221111111111 113699999988
Q ss_pred Ch
Q 019790 227 GA 228 (335)
Q Consensus 227 g~ 228 (335)
|.
T Consensus 86 g~ 87 (270)
T PRK05650 86 GV 87 (270)
T ss_pred CC
Confidence 74
No 288
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.88 E-value=0.21 Score=43.12 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=50.4
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARVK 211 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~~ 211 (335)
+.+++| .|++|.+|..++..+...|++|+++++++++.+... ..+... .+ |..+.. +.+.+.
T Consensus 7 ~~~vlV----------tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (239)
T PRK07666 7 GKNALI----------TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIE 76 (239)
T ss_pred CCEEEE----------EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHH
Confidence 567999 999999999999998889999999999877654432 223222 12 222221 222222
Q ss_pred HHh-CCCcccEEEeCCCh
Q 019790 212 EET-GGKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~-~~~~~d~vid~~g~ 228 (335)
+.. ...++|.+|.+.|.
T Consensus 77 ~~~~~~~~id~vi~~ag~ 94 (239)
T PRK07666 77 QLKNELGSIDILINNAGI 94 (239)
T ss_pred HHHHHcCCccEEEEcCcc
Confidence 211 11368999998864
No 289
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.13 Score=44.51 Aligned_cols=79 Identities=27% Similarity=0.465 Sum_probs=52.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC-C---EEEeCCC---ccH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D---VCINYKT---EDF- 206 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~-~---~~~~~~~---~~~- 206 (335)
++.+++| +|++|.+|..+++.+...|++|++++|++++.+.+.+ .+. . ...|..+ ..+
T Consensus 5 ~~k~vlI----------tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~ 74 (239)
T PRK08703 5 SDKTILV----------TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFE 74 (239)
T ss_pred CCCEEEE----------ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHH
Confidence 3568999 9999999999999999999999999998876654421 221 1 1123221 122
Q ss_pred --HHHHHHHhCCCcccEEEeCCCh
Q 019790 207 --VARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 207 --~~~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.+... ..+|.+|.++|.
T Consensus 75 ~~~~~i~~~~~-~~id~vi~~ag~ 97 (239)
T PRK08703 75 QFAATIAEATQ-GKLDGIVHCAGY 97 (239)
T ss_pred HHHHHHHHHhC-CCCCEEEEeccc
Confidence 223333332 268999998873
No 290
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.19 Score=45.39 Aligned_cols=35 Identities=31% Similarity=0.362 Sum_probs=32.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~ 183 (335)
.+.++|| +||++++|.++++.+...|++|+++.++
T Consensus 7 ~~k~~lI----------TGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALV----------AGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 4678999 9999999999999999999999999886
No 291
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.84 E-value=0.23 Score=44.03 Aligned_cols=77 Identities=17% Similarity=0.195 Sum_probs=49.4
Q ss_pred CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHH---HH-HHcCCCEEE--eCCCcc-HH--
Q 019790 139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLA---VC-KDLGADVCI--NYKTED-FV-- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~---~~-~~~g~~~~~--~~~~~~-~~-- 207 (335)
.+..+|| +|+++ ++|.++++.+...|++|+++.++++..+ .+ ++.+....+ |-.+.. ..
T Consensus 6 ~~k~~lV----------TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 6 QGKRGLI----------MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CCCEEEE----------eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHH
Confidence 4678999 99875 9999999999999999999887653222 22 234433222 333322 22
Q ss_pred -HHHHHHhCCCcccEEEeCCC
Q 019790 208 -ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 -~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|++++++|
T Consensus 76 ~~~~~~~~--g~iD~lVnnAG 94 (271)
T PRK06505 76 FEALEKKW--GKLDFVVHAIG 94 (271)
T ss_pred HHHHHHHh--CCCCEEEECCc
Confidence 2222222 36999999887
No 292
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.83 E-value=0.16 Score=46.16 Aligned_cols=72 Identities=21% Similarity=0.298 Sum_probs=51.2
Q ss_pred EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCCccc
Q 019790 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVD 220 (335)
Q Consensus 142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d 220 (335)
+|+| +||+|-+|..++..+...|.+|++++|+.++...+...+...+. |..+ .+.+.+... ++|
T Consensus 2 kIlV----------tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~~~l~~al~--g~d 66 (317)
T CHL00194 2 SLLV----------IGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSL---PETLPPSFK--GVT 66 (317)
T ss_pred EEEE----------ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCC---HHHHHHHHC--CCC
Confidence 6889 99999999999999999999999999987665555545554332 2222 223444443 589
Q ss_pred EEEeCCCh
Q 019790 221 VILDCMGA 228 (335)
Q Consensus 221 ~vid~~g~ 228 (335)
+||.+++.
T Consensus 67 ~Vi~~~~~ 74 (317)
T CHL00194 67 AIIDASTS 74 (317)
T ss_pred EEEECCCC
Confidence 99998753
No 293
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.14 Score=44.73 Aligned_cols=38 Identities=29% Similarity=0.400 Sum_probs=33.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 186 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~ 186 (335)
.+.++|| +|+++.+|..+++.+...|++|++++++++.
T Consensus 5 ~~k~~lI----------tGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLV----------TGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 4678999 9999999999999999999999999988654
No 294
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.80 E-value=0.18 Score=44.06 Aligned_cols=77 Identities=19% Similarity=0.331 Sum_probs=49.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-EE--eCCCcc-H---H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTED-F---V 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~-~---~ 207 (335)
.+.++|| +|+++.+|.+.++.+...|++|+++.++ ++.+.+ .+.+... .+ |-.+.. . .
T Consensus 14 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 82 (258)
T PRK06935 14 DGKVAIV----------TGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVV 82 (258)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4678999 9999999999999999999999999887 332222 2333322 22 333222 1 1
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|+++.+.|.
T Consensus 83 ~~~~~~~--g~id~li~~ag~ 101 (258)
T PRK06935 83 KEALEEF--GKIDILVNNAGT 101 (258)
T ss_pred HHHHHHc--CCCCEEEECCCC
Confidence 2222222 368999998873
No 295
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.077 Score=46.81 Aligned_cols=77 Identities=27% Similarity=0.368 Sum_probs=49.9
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHh-CC
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVARVKEET-GG 216 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~-~~ 216 (335)
+.+++| +|++|.+|..+++.+...|++|++++++.++.+... +... ..|..+.. +.+.+.... ..
T Consensus 4 ~~~vlV----------tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~ 71 (270)
T PRK06179 4 SKVALV----------TGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARA 71 (270)
T ss_pred CCEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhC
Confidence 457899 999999999999999899999999998866543221 2221 23433322 222222211 11
Q ss_pred CcccEEEeCCCh
Q 019790 217 KGVDVILDCMGA 228 (335)
Q Consensus 217 ~~~d~vid~~g~ 228 (335)
.++|++|.|+|.
T Consensus 72 g~~d~li~~ag~ 83 (270)
T PRK06179 72 GRIDVLVNNAGV 83 (270)
T ss_pred CCCCEEEECCCC
Confidence 368999999984
No 296
>PRK09186 flagellin modification protein A; Provisional
Probab=94.79 E-value=0.2 Score=43.63 Aligned_cols=79 Identities=15% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc----CCC---E-EEeCCCcc-HHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD---V-CINYKTED-FVA 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~----g~~---~-~~~~~~~~-~~~ 208 (335)
.+.++|| .|+++.+|..++..+...|++|+++.+++++.+.+. ++ +.. . ..|-.+.. +.+
T Consensus 3 ~~k~vlI----------tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~ 72 (256)
T PRK09186 3 KGKTILI----------TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEE 72 (256)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHH
Confidence 4678999 999999999999999999999999998877665442 22 221 1 22333322 222
Q ss_pred HHHHHh-CCCcccEEEeCCC
Q 019790 209 RVKEET-GGKGVDVILDCMG 227 (335)
Q Consensus 209 ~~~~~~-~~~~~d~vid~~g 227 (335)
.+.+.. ...++|+++.+++
T Consensus 73 ~~~~~~~~~~~id~vi~~A~ 92 (256)
T PRK09186 73 FLSKSAEKYGKIDGAVNCAY 92 (256)
T ss_pred HHHHHHHHcCCccEEEECCc
Confidence 222211 1135899999885
No 297
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.79 E-value=0.21 Score=43.52 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=51.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCccHH----
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV---- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~---- 207 (335)
.+.++|| +|++|.+|..+++.+...|++|++++++++..+.+. ..+... .+ |..+....
T Consensus 3 ~~~~vlI----------tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 72 (258)
T PRK12429 3 KGKVALV----------TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGI 72 (258)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 3568999 999999999999999889999999999877655442 223221 12 33332211
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|++|.+++
T Consensus 73 ~~~~~~~--~~~d~vi~~a~ 90 (258)
T PRK12429 73 DYAVETF--GGVDILVNNAG 90 (258)
T ss_pred HHHHHHc--CCCCEEEECCC
Confidence 1222222 36899999886
No 298
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.22 Score=43.53 Aligned_cols=79 Identities=27% Similarity=0.312 Sum_probs=50.3
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCC-C-EE--EeCCCcc-HHHHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA-D-VC--INYKTED-FVARVKEE 213 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~-~-~~--~~~~~~~-~~~~~~~~ 213 (335)
+.++|| +|++|.+|...+..+...|++|++++++.++.+.+.+ +.. . .. .|-.+.. +...+.+.
T Consensus 2 ~k~ilI----------tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 71 (257)
T PRK07074 2 KRTALV----------TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANA 71 (257)
T ss_pred CCEEEE----------ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 357899 9999999999999888889999999998776655432 221 1 11 2322222 11222221
Q ss_pred h-CCCcccEEEeCCCh
Q 019790 214 T-GGKGVDVILDCMGA 228 (335)
Q Consensus 214 ~-~~~~~d~vid~~g~ 228 (335)
. ...++|+++.+.|.
T Consensus 72 ~~~~~~~d~vi~~ag~ 87 (257)
T PRK07074 72 AAERGPVDVLVANAGA 87 (257)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 11258999998873
No 299
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.77 E-value=0.16 Score=44.58 Aligned_cols=73 Identities=25% Similarity=0.294 Sum_probs=46.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCcc-HHHHHHHHh-CCCcccEEEeCCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTED-FVARVKEET-GGKGVDVILDCMG 227 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~-~~~~~~~~~-~~~~~d~vid~~g 227 (335)
+|+++++|.++++.+...|++|+++.+++++.+.+. +.+....+ |-.+.. ..+.+.+.. ...++|++|.++|
T Consensus 6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG 85 (259)
T PRK08340 6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAG 85 (259)
T ss_pred EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 999999999999999989999999999877654442 22322222 322222 222222211 1136899999887
Q ss_pred h
Q 019790 228 A 228 (335)
Q Consensus 228 ~ 228 (335)
.
T Consensus 86 ~ 86 (259)
T PRK08340 86 N 86 (259)
T ss_pred C
Confidence 3
No 300
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.21 Score=43.50 Aligned_cols=76 Identities=22% Similarity=0.361 Sum_probs=50.4
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEE--eCCCcc-HH---H
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTED-FV---A 208 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~---~ 208 (335)
+.++|| .|+++.+|.++++.+...|++|+.+.++.++.+.+.+ .+.. ..+ |..+.. .. +
T Consensus 8 ~k~vlI----------tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (252)
T PRK07035 8 GKIALV----------TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFA 77 (252)
T ss_pred CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 467999 9999999999999999999999999998776544432 2322 122 322222 11 1
Q ss_pred HHHHHhCCCcccEEEeCCC
Q 019790 209 RVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.. .++|+++.+.|
T Consensus 78 ~~~~~~--~~id~li~~ag 94 (252)
T PRK07035 78 HIRERH--GRLDILVNNAA 94 (252)
T ss_pred HHHHHc--CCCCEEEECCC
Confidence 222222 25899998887
No 301
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.76 E-value=0.25 Score=44.71 Aligned_cols=84 Identities=19% Similarity=0.224 Sum_probs=57.0
Q ss_pred ccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH--
Q 019790 156 HGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-- 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 231 (335)
+| .|.+|.+.+..++..|. +|++.++++++.+.+++.|...... .+.. +.. ...|+||.|+.....
T Consensus 12 IG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~----~~~--~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 12 IG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAA----EAV--KGADLVILCVPVGASGA 81 (307)
T ss_pred Ee-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHH----HHh--cCCCEEEECCCHHHHHH
Confidence 77 89999999999988885 8999999998888887777532111 1111 111 258999999987543
Q ss_pred --HHhhccccCCCEEEEEec
Q 019790 232 --QRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 232 --~~~~~~l~~~G~~v~~g~ 249 (335)
......++++..++.+|.
T Consensus 82 v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHhhCCCCCEEEeCcc
Confidence 333345666666666654
No 302
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.74 E-value=0.12 Score=45.70 Aligned_cols=101 Identities=19% Similarity=0.228 Sum_probs=64.7
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC--CE-EEeCCCccHHH
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DV-CINYKTEDFVA 208 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~ 208 (335)
....++.++.+||- .| ++.|..+..+++..+++|++++.++...+.+++... +. .+.. .++.
T Consensus 45 l~~l~l~~~~~VLD----------iG--cG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~- 109 (263)
T PTZ00098 45 LSDIELNENSKVLD----------IG--SGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL- 109 (263)
T ss_pred HHhCCCCCCCEEEE----------Ec--CCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc-
Confidence 35567889999888 76 335666777777778999999999988887775321 11 1111 1110
Q ss_pred HHHHHhCCCcccEEEeC-----CC--h--hhHHHhhccccCCCEEEEEec
Q 019790 209 RVKEETGGKGVDVILDC-----MG--A--SYFQRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~-----~g--~--~~~~~~~~~l~~~G~~v~~g~ 249 (335)
........||+|+.. .+ . ..+..+.+.|+|+|+++....
T Consensus 110 --~~~~~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 110 --KKDFPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred --cCCCCCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 001123469999862 12 1 235678899999999987654
No 303
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.69 E-value=0.39 Score=42.13 Aligned_cols=95 Identities=14% Similarity=0.161 Sum_probs=64.3
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 211 (335)
......++.+||- .| ++.|..+..+++.. +.+|++++.++...+.+++.+..... .+ . .
T Consensus 23 ~~l~~~~~~~vLD----------lG--cG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~d---~----~ 82 (255)
T PRK14103 23 ARVGAERARRVVD----------LG--CGPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-GD---V----R 82 (255)
T ss_pred HhCCCCCCCEEEE----------Ec--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-cC---h----h
Confidence 4445667788877 76 34477777887775 67999999999988888776544322 11 1 1
Q ss_pred HHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEE
Q 019790 212 EETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~ 247 (335)
+......||+|+-... . ..+..+.+.|+++|+++..
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 83 DWKPKPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hCCCCCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 2222347999987443 1 2356788999999999764
No 304
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=94.67 E-value=0.17 Score=47.01 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=58.0
Q ss_pred ccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcC---C-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 156 HGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---A-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
+| +|.+|..+++.+-+.| .+|++.+|+.++.+.+.+.. . ...+|-.+. +.+.+... ++|+||+|.+...
T Consensus 7 iG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~---~al~~li~--~~d~VIn~~p~~~ 80 (389)
T COG1748 7 IG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV---DALVALIK--DFDLVINAAPPFV 80 (389)
T ss_pred EC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh---HHHHHHHh--cCCEEEEeCCchh
Confidence 77 5999999999977777 79999999999888886553 2 123343332 34445544 4699999999866
Q ss_pred HHHhh-ccccCCCEEEEEe
Q 019790 231 FQRNL-GSLNIDGRLFIIG 248 (335)
Q Consensus 231 ~~~~~-~~l~~~G~~v~~g 248 (335)
...++ .+++.+=.++...
T Consensus 81 ~~~i~ka~i~~gv~yvDts 99 (389)
T COG1748 81 DLTILKACIKTGVDYVDTS 99 (389)
T ss_pred hHHHHHHHHHhCCCEEEcc
Confidence 44444 3334343444443
No 305
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.66 E-value=0.25 Score=46.52 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=50.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEEeCCCccHHHHHHHHhCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDFVARVKEETGG 216 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~ 216 (335)
.+.+++| .||+|.+|.+++..+...|++|+++++++++.+... ..... ..+..+-.+ .+.+.+..+
T Consensus 177 ~gK~VLI----------TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~- 244 (406)
T PRK07424 177 KGKTVAV----------TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLE- 244 (406)
T ss_pred CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhC-
Confidence 4678999 999999999999998889999999998876554322 11111 122111112 223444433
Q ss_pred CcccEEEeCCC
Q 019790 217 KGVDVILDCMG 227 (335)
Q Consensus 217 ~~~d~vid~~g 227 (335)
++|++|.++|
T Consensus 245 -~IDiLInnAG 254 (406)
T PRK07424 245 -KVDILIINHG 254 (406)
T ss_pred -CCCEEEECCC
Confidence 6999999876
No 306
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.23 Score=43.95 Aligned_cols=79 Identities=20% Similarity=0.289 Sum_probs=51.0
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC-EEE--eCCCc-cHHHHHHHHh
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTE-DFVARVKEET 214 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~-~~~~~~~~~~ 214 (335)
+.++|| +|++|.+|..+++.+...|++|++++++.+..+.+.+ .+.. ..+ |..+. .+...+....
T Consensus 3 ~k~vlI----------tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (275)
T PRK08263 3 EKVWFI----------TGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAV 72 (275)
T ss_pred CCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHH
Confidence 357899 9999999999999888889999999998877665543 2221 122 22221 1211122111
Q ss_pred -CCCcccEEEeCCCh
Q 019790 215 -GGKGVDVILDCMGA 228 (335)
Q Consensus 215 -~~~~~d~vid~~g~ 228 (335)
.-.++|.+|.|+|.
T Consensus 73 ~~~~~~d~vi~~ag~ 87 (275)
T PRK08263 73 EHFGRLDIVVNNAGY 87 (275)
T ss_pred HHcCCCCEEEECCCC
Confidence 11368999999873
No 307
>PLN02253 xanthoxin dehydrogenase
Probab=94.64 E-value=0.2 Score=44.41 Aligned_cols=78 Identities=21% Similarity=0.334 Sum_probs=50.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--C-EE--EeCCCcc-HH---H
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VC--INYKTED-FV---A 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~-~~--~~~~~~~-~~---~ 208 (335)
.+.++|| .|+++.+|.++++.+...|++|++++++++..+.+. +++. . .. .|-.+.+ +. +
T Consensus 17 ~~k~~lI----------tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 86 (280)
T PLN02253 17 LGKVALV----------TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVD 86 (280)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHH
Confidence 3678999 999999999999988888999999998766544433 2321 1 11 2333322 11 2
Q ss_pred HHHHHhCCCcccEEEeCCCh
Q 019790 209 RVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.. .++|+++.++|.
T Consensus 87 ~~~~~~--g~id~li~~Ag~ 104 (280)
T PLN02253 87 FTVDKF--GTLDIMVNNAGL 104 (280)
T ss_pred HHHHHh--CCCCEEEECCCc
Confidence 222222 368999998863
No 308
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.61 Score=40.52 Aligned_cols=104 Identities=24% Similarity=0.384 Sum_probs=62.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCc-cH---
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTE-DF--- 206 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~-~~--- 206 (335)
.+.++|| +|+++.+|.++++.+...|++|++.. +++++.+.. +..+... .+ |-.+. ..
T Consensus 3 ~~k~~lI----------tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (252)
T PRK12747 3 KGKVALV----------TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEAL 72 (252)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHH
Confidence 3578999 99999999999999999999998875 444443322 2223221 11 22221 11
Q ss_pred HHHHHHH----hCCCcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790 207 VARVKEE----TGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 207 ~~~~~~~----~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 252 (335)
.+.+.+. .+..++|+++.++|.. .+ ..+++.++..|+++.++....
T Consensus 73 ~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 73 YSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred HHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 1222221 1223799999988721 01 124455666799998876654
No 309
>PLN00016 RNA-binding protein; Provisional
Probab=94.63 E-value=0.19 Score=46.84 Aligned_cols=96 Identities=19% Similarity=0.209 Sum_probs=61.2
Q ss_pred CCEEEEeeccccccccc----cccchHHHHHHHHHhhCCCeEEEEecChhhHHH-----------HHHcCCCEEEeCCCc
Q 019790 140 GESFLVDFCSISYSDVH----GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-----------CKDLGADVCINYKTE 204 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~----g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~ 204 (335)
..+||| + ||+|-+|..++..+...|.+|++++|+...... +...+...+. .
T Consensus 52 ~~~VLV----------t~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~--- 117 (378)
T PLN00016 52 KKKVLI----------VNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G--- 117 (378)
T ss_pred cceEEE----------EeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e---
Confidence 367999 9 999999999999999899999999987654221 1122333322 1
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCC--CEEEEEecc
Q 019790 205 DFVARVKEETGGKGVDVILDCMGASY--FQRNLGSLNID--GRLFIIGTQ 250 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~--G~~v~~g~~ 250 (335)
+..+ +.+.....++|+|+++.+... ....++.++.. .+++.++..
T Consensus 118 D~~d-~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 118 DPAD-VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred cHHH-HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 1211 333333457999999987532 34445555433 378776543
No 310
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.61 E-value=0.053 Score=46.00 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=65.3
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFV 207 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~ 207 (335)
..+..+-.+||. +| +.+|..++.+|+.+ +.+|+.+..+++..+.+++ .|....+.....+..
T Consensus 40 l~~~~~~k~vLE----------IG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~ 107 (205)
T PF01596_consen 40 LVRLTRPKRVLE----------IG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDAL 107 (205)
T ss_dssp HHHHHT-SEEEE----------ES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HH
T ss_pred HHHhcCCceEEE----------ec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccH
Confidence 334455568888 87 77899999999987 5799999999988777753 443221222223344
Q ss_pred HHHHHHhC---CCcccEEEe-CCChh---hHHHhhccccCCCEEEE
Q 019790 208 ARVKEETG---GKGVDVILD-CMGAS---YFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 208 ~~~~~~~~---~~~~d~vid-~~g~~---~~~~~~~~l~~~G~~v~ 246 (335)
+.+.+... .+.||.||- +--.. .+..+++.|+++|-++.
T Consensus 108 ~~l~~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~ 153 (205)
T PF01596_consen 108 EVLPELANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIA 153 (205)
T ss_dssp HHHHHHHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred hhHHHHHhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEE
Confidence 44444332 237999974 44332 35678899999998775
No 311
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=94.60 E-value=0.12 Score=42.62 Aligned_cols=100 Identities=21% Similarity=0.258 Sum_probs=62.9
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHH----HcCCCEEEeCCCccHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFV 207 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~ 207 (335)
....+++|+.++= .| .+.|...+++++.. ..+|+++++++++.+..+ ++|.+.+..- ..+..
T Consensus 28 s~L~~~~g~~l~D----------IG--aGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv-~g~Ap 94 (187)
T COG2242 28 SKLRPRPGDRLWD----------IG--AGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVV-EGDAP 94 (187)
T ss_pred HhhCCCCCCEEEE----------eC--CCccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEE-eccch
Confidence 3456788885544 55 23455566666433 469999999998877664 5776543211 12222
Q ss_pred HHHHHHhCCCcccEEEeCCCh---hhHHHhhccccCCCEEEEEe
Q 019790 208 ARVKEETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g 248 (335)
+.+.+. ..+|.+|---|. ..++.++..|+++||++.-.
T Consensus 95 ~~L~~~---~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 95 EALPDL---PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred HhhcCC---CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 333222 258999875553 23678899999999998754
No 312
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.27 Score=43.96 Aligned_cols=37 Identities=27% Similarity=0.335 Sum_probs=32.2
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
..+.++|| +|+++++|.++++.+...|++|+++.++.
T Consensus 4 l~~k~~lI----------TGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIV----------TGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 35678999 99999999999998888999999987654
No 313
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.60 E-value=0.26 Score=43.94 Aligned_cols=83 Identities=31% Similarity=0.382 Sum_probs=55.8
Q ss_pred CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE--------EeCCCccHH
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC--------INYKTEDFV 207 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~--------~~~~~~~~~ 207 (335)
.++...++| .||+.++|++.+.-++..|++|+++.|+.+++..+.. ++.... .|..+-+-.
T Consensus 30 ~k~~~hi~i----------tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v 99 (331)
T KOG1210|consen 30 PKPRRHILI----------TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSV 99 (331)
T ss_pred cCccceEEE----------ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHH
Confidence 345578999 9999999999999999999999999999999887753 331111 111111112
Q ss_pred HHHHHHhC--CCcccEEEeCCChh
Q 019790 208 ARVKEETG--GKGVDVILDCMGAS 229 (335)
Q Consensus 208 ~~~~~~~~--~~~~d~vid~~g~~ 229 (335)
+.+.+.+. ..++|.+|.|+|..
T Consensus 100 ~~~~~~l~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 100 SKVIEELRDLEGPIDNLFCCAGVA 123 (331)
T ss_pred HHHHhhhhhccCCcceEEEecCcc
Confidence 22222221 13789999999853
No 314
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.59 E-value=0.24 Score=42.86 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=51.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~ 210 (335)
++.++|| +|++|.+|..++..+...|++|++++++.+..+.+. ..+... .+ |..+.. ..+.+
T Consensus 2 ~~~~ilI----------tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 71 (250)
T TIGR03206 2 KDKTAIV----------TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAV 71 (250)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 3678999 999999999999999999999999998877655443 222222 22 222222 22222
Q ss_pred HHHhC-CCcccEEEeCCC
Q 019790 211 KEETG-GKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~~-~~~~d~vid~~g 227 (335)
.+... ..++|++|.+.|
T Consensus 72 ~~~~~~~~~~d~vi~~ag 89 (250)
T TIGR03206 72 AAAEQALGPVDVLVNNAG 89 (250)
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 22211 136899999887
No 315
>PRK06398 aldose dehydrogenase; Validated
Probab=94.54 E-value=0.03 Score=49.24 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=48.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCcc-HHHHHHHHh-C
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTED-FVARVKEET-G 215 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~-~ 215 (335)
.+.++|| +|+++.+|.+++..+...|++|+++.+++.... ... ...|-.+.. +.+.+.+.. .
T Consensus 5 ~gk~vlI----------tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 5 KDKVAIV----------TGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678999 999999999999999999999999998764422 111 112333322 222222211 1
Q ss_pred CCcccEEEeCCC
Q 019790 216 GKGVDVILDCMG 227 (335)
Q Consensus 216 ~~~~d~vid~~g 227 (335)
..++|++|.++|
T Consensus 70 ~~~id~li~~Ag 81 (258)
T PRK06398 70 YGRIDILVNNAG 81 (258)
T ss_pred cCCCCEEEECCC
Confidence 135899999887
No 316
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.53 E-value=0.19 Score=43.91 Aligned_cols=80 Identities=20% Similarity=0.328 Sum_probs=51.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~ 210 (335)
++.+++| .|+++.+|..++..+...|++|+++.+++++.+.+. +.+... . .|..+.. +...+
T Consensus 10 ~~k~ilI----------tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (256)
T PRK06124 10 AGQVALV----------TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF 79 (256)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 4778999 999999999999988888999999999876654432 233221 2 2333322 22222
Q ss_pred HHHhC-CCcccEEEeCCCh
Q 019790 211 KEETG-GKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~-~~~~d~vid~~g~ 228 (335)
.+... ..++|.+|.++|.
T Consensus 80 ~~~~~~~~~id~vi~~ag~ 98 (256)
T PRK06124 80 ARIDAEHGRLDILVNNVGA 98 (256)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 22111 1368999998874
No 317
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.52 E-value=0.27 Score=42.44 Aligned_cols=78 Identities=31% Similarity=0.463 Sum_probs=51.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EE--eCCCcc-HHH---HH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED-FVA---RV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~-~~~---~~ 210 (335)
++.++|| .|++|.+|..++..+...|++|+...++.++.+.+. ..+... .+ |-.+.. +.+ .+
T Consensus 5 ~~~~vlI----------tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 5 SGRKALV----------TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence 3568999 999999999999999889999988888776665543 333222 22 222221 111 22
Q ss_pred HHHhCCCcccEEEeCCCh
Q 019790 211 KEETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~ 228 (335)
.+.. .++|.+|.++|.
T Consensus 75 ~~~~--~~id~vi~~ag~ 90 (245)
T PRK12936 75 EADL--EGVDILVNNAGI 90 (245)
T ss_pred HHHc--CCCCEEEECCCC
Confidence 2222 368999999873
No 318
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.47 E-value=0.25 Score=43.18 Aligned_cols=41 Identities=29% Similarity=0.312 Sum_probs=34.8
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 190 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~ 190 (335)
+.++|| .|+++.+|..++..+...|++|+.++++....+.+
T Consensus 2 ~k~ilI----------tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~ 42 (259)
T PRK12384 2 NQVAVV----------IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANV 42 (259)
T ss_pred CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 357899 99999999999999988999999999887655443
No 319
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.46 E-value=0.46 Score=42.45 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=54.8
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
-.|.+++| .|..+.+|..++.++...|++|++..+... .+.+.+ +
T Consensus 157 l~Gk~vvV----------iG~gg~vGkpia~~L~~~gatVtv~~~~t~-----------------------~L~~~~--~ 201 (283)
T PRK14192 157 LAGKHAVV----------VGRSAILGKPMAMMLLNANATVTICHSRTQ-----------------------NLPELV--K 201 (283)
T ss_pred CCCCEEEE----------ECCcHHHHHHHHHHHHhCCCEEEEEeCCch-----------------------hHHHHh--c
Confidence 56788999 886556999999999999998887764211 122222 3
Q ss_pred cccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+|++++|+|...+ --.+.++++-.++.+|...
T Consensus 202 ~aDIvI~AtG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 202 QADIIVGAVGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred cCCEEEEccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 68999999986542 1235578888888887544
No 320
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.45 E-value=0.27 Score=42.96 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=51.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVAR- 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~- 209 (335)
.+.++|| .|+++.+|..++..+...|++|++++++.+..+.+. ..+.+. . .|..+.+ ..+.
T Consensus 10 ~~k~vlV----------tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~ 79 (255)
T PRK06113 10 DGKCAII----------TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA 79 (255)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 4678999 999999999999999899999999998877654442 223222 2 2333322 1121
Q ss_pred --HHHHhCCCcccEEEeCCC
Q 019790 210 --VKEETGGKGVDVILDCMG 227 (335)
Q Consensus 210 --~~~~~~~~~~d~vid~~g 227 (335)
+.+.. .++|+++.++|
T Consensus 80 ~~~~~~~--~~~d~li~~ag 97 (255)
T PRK06113 80 DFALSKL--GKVDILVNNAG 97 (255)
T ss_pred HHHHHHc--CCCCEEEECCC
Confidence 22222 36899999887
No 321
>PRK07985 oxidoreductase; Provisional
Probab=94.45 E-value=0.53 Score=42.24 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=30.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~ 183 (335)
.+.++|| +|+++.+|.++++.+...|++|+++.++
T Consensus 48 ~~k~vlI----------TGas~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALV----------TGGDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred CCCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 4568999 9999999999999999999999987654
No 322
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.22 Score=44.12 Aligned_cols=37 Identities=24% Similarity=0.482 Sum_probs=32.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 185 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~ 185 (335)
.+.++|| +|+++.+|..++..+...|++|+++.++.+
T Consensus 5 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFI----------TGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 4568999 999999999999998889999999998653
No 323
>PRK12743 oxidoreductase; Provisional
Probab=94.40 E-value=0.26 Score=43.04 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=48.0
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHH----HHHcCCCE-E--EeCCCcc-H---H
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAV----CKDLGADV-C--INYKTED-F---V 207 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~----~~~~g~~~-~--~~~~~~~-~---~ 207 (335)
+.++|| .|+++.+|..+++.+...|++|+++.+ +.++.+. ++..+... . .|..+.. . .
T Consensus 2 ~k~vlI----------tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 71 (256)
T PRK12743 2 AQVAIV----------TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQAL 71 (256)
T ss_pred CCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 357899 999999999999999999999988864 3333322 22344322 2 2333322 1 2
Q ss_pred HHHHHHhCCCcccEEEeCCC
Q 019790 208 ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. .++|++|.+.|
T Consensus 72 ~~~~~~~--~~id~li~~ag 89 (256)
T PRK12743 72 DKLIQRL--GRIDVLVNNAG 89 (256)
T ss_pred HHHHHHc--CCCCEEEECCC
Confidence 2233322 36899999887
No 324
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=94.37 E-value=0.2 Score=44.91 Aligned_cols=145 Identities=21% Similarity=0.276 Sum_probs=79.1
Q ss_pred CCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHH--HHHHHhcCCCCCCEEEEeeccccccccc
Q 019790 79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVDFCSISYSDVH 156 (335)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~--~~l~~~~~~~~~~~vli~~~~~~~~~~~ 156 (335)
+++|++.+... .|.++-.-+...++.+.+++.+-.+. ...|.. .+|.+. ..+|++||= .
T Consensus 108 ~~vg~~~~I~P---~w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLD----------v 168 (295)
T PF06325_consen 108 IRVGDRLVIVP---SWEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLD----------V 168 (295)
T ss_dssp EEECTTEEEEE---TT----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEE----------E
T ss_pred EEECCcEEEEC---CCcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEE----------e
Confidence 56677655552 34444222344566676665544442 222222 223222 467788877 6
Q ss_pred cccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 157 GGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 157 g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
| ++.|.+++..++. |+ +|++++.++...+.+++ .+. +.+......+.. ..+||+|+-++-...
T Consensus 169 G--~GSGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~--------~~~~dlvvANI~~~v 237 (295)
T PF06325_consen 169 G--CGSGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV--------EGKFDLVVANILADV 237 (295)
T ss_dssp S---TTSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC--------CS-EEEEEEES-HHH
T ss_pred C--CcHHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc--------cccCCEEEECCCHHH
Confidence 6 4456666655554 87 79999988776665543 221 122111111111 157999999988765
Q ss_pred H----HHhhccccCCCEEEEEeccCCC
Q 019790 231 F----QRNLGSLNIDGRLFIIGTQGGA 253 (335)
Q Consensus 231 ~----~~~~~~l~~~G~~v~~g~~~~~ 253 (335)
+ ....+.|+++|.+++-|.....
T Consensus 238 L~~l~~~~~~~l~~~G~lIlSGIl~~~ 264 (295)
T PF06325_consen 238 LLELAPDIASLLKPGGYLILSGILEEQ 264 (295)
T ss_dssp HHHHHHHCHHHEEEEEEEEEEEEEGGG
T ss_pred HHHHHHHHHHhhCCCCEEEEccccHHH
Confidence 4 3456778999999998876643
No 325
>PRK14967 putative methyltransferase; Provisional
Probab=94.35 E-value=1 Score=38.57 Aligned_cols=95 Identities=19% Similarity=0.253 Sum_probs=60.4
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCCCEEEeCCCccHHH
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVA 208 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~ 208 (335)
...+.+++++|- .| +|. |..+..+++. ++ +|++++.+++..+.+++ .+....+.. .++.+
T Consensus 31 ~~~~~~~~~vLD----------lG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d~~~ 95 (223)
T PRK14967 31 AEGLGPGRRVLD----------LC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GDWAR 95 (223)
T ss_pred hcccCCCCeEEE----------ec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cchhh
Confidence 345678888888 76 454 8888888875 65 99999999887776543 333222211 22222
Q ss_pred HHHHHhCCCcccEEEeCCCh----------------------------hhHHHhhccccCCCEEEEE
Q 019790 209 RVKEETGGKGVDVILDCMGA----------------------------SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~ 247 (335)
......||+|+.+.+- ..+..+.+.|+++|+++.+
T Consensus 96 ----~~~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 96 ----AVEFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred ----hccCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1223479999975210 0134577899999999876
No 326
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.34 Score=41.94 Aligned_cols=78 Identities=22% Similarity=0.290 Sum_probs=50.5
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c--CCCE-E--EeCCCcc-HHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GADV-C--INYKTED-FVAR 209 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~--g~~~-~--~~~~~~~-~~~~ 209 (335)
+.++|| +|+++.+|..+++.+...|++|+++++++++.+.+.. . +... . .|..+.. +.+.
T Consensus 2 ~k~vlI----------tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 71 (248)
T PRK08251 2 RQKILI----------TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEV 71 (248)
T ss_pred CCEEEE----------ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHH
Confidence 457899 9999999999998888889999999998877655432 1 2111 1 2333322 2222
Q ss_pred HHHHh-CCCcccEEEeCCC
Q 019790 210 VKEET-GGKGVDVILDCMG 227 (335)
Q Consensus 210 ~~~~~-~~~~~d~vid~~g 227 (335)
+.+.. ...++|++|.++|
T Consensus 72 ~~~~~~~~~~id~vi~~ag 90 (248)
T PRK08251 72 FAEFRDELGGLDRVIVNAG 90 (248)
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 22211 1136899999886
No 327
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.34 E-value=0.41 Score=42.49 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=57.4
Q ss_pred CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc---CCCEEEeCCCccHHHHHHH
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCINYKTEDFVARVKE 212 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~ 212 (335)
...+.+++| .| +|++|.+++..+...|++|++..|+.++.+.+. .+ +....... .+
T Consensus 114 ~~~~k~vli----------iG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~---- 173 (270)
T TIGR00507 114 LRPNQRVLI----------IG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DE---- 173 (270)
T ss_pred CccCCEEEE----------Ec-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hh----
Confidence 345678899 88 589999999888888999999999987765543 22 21111111 11
Q ss_pred HhCCCcccEEEeCCChhhHH------HhhccccCCCEEEEEe
Q 019790 213 ETGGKGVDVILDCMGASYFQ------RNLGSLNIDGRLFIIG 248 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~~~~~------~~~~~l~~~G~~v~~g 248 (335)
. ....+|+||+|++..... .....++++..++.+.
T Consensus 174 ~-~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~ 214 (270)
T TIGR00507 174 L-PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMV 214 (270)
T ss_pred h-cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence 1 113589999999864211 0123456666666663
No 328
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.32 E-value=0.44 Score=40.69 Aligned_cols=100 Identities=20% Similarity=0.148 Sum_probs=60.9
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---------eCCCcc-H
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---------NYKTED-F 206 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---------~~~~~~-~ 206 (335)
.++.++|+ .| .+.|.-++.+|. +|.+|++++.++...+.+. +.+..... ...... .
T Consensus 33 ~~~~rvLd----------~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 99 (213)
T TIGR03840 33 PAGARVFV----------PL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIF 99 (213)
T ss_pred CCCCeEEE----------eC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEE
Confidence 56778999 65 667888888886 5999999999999888753 23221000 000000 0
Q ss_pred HHHHHHHh--CCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEecc
Q 019790 207 VARVKEET--GGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 207 ~~~~~~~~--~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~ 250 (335)
...+.+.. ....||.++|+..- ..+..+.+.|+|+|+++..+..
T Consensus 100 ~~D~~~~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 100 CGDFFALTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred EccCCCCCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 00111111 01369999996541 2356788999999997666543
No 329
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.18 Score=43.21 Aligned_cols=74 Identities=22% Similarity=0.233 Sum_probs=49.4
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCcc-HHHHHHHHhCCC
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTED-FVARVKEETGGK 217 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~~~~ 217 (335)
+.++|| .|++|.+|..+++.+...|++|+++.++.+. ..... ...|..+.. +.+.+.+.....
T Consensus 3 ~k~vlI----------tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 3 SRTVLV----------TGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 567899 9999999999999999999999999987654 11111 123433322 222333333333
Q ss_pred cccEEEeCCCh
Q 019790 218 GVDVILDCMGA 228 (335)
Q Consensus 218 ~~d~vid~~g~ 228 (335)
++|++|.++|.
T Consensus 68 ~~d~vi~~ag~ 78 (234)
T PRK07577 68 PVDAIVNNVGI 78 (234)
T ss_pred CCcEEEECCCC
Confidence 68999998874
No 330
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.31 E-value=0.33 Score=42.40 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=50.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc--CCCEE-EeCCCccHHHHHHHHhC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL--GADVC-INYKTEDFVARVKEETG 215 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~ 215 (335)
.+.++|| +|++|.+|..++..+...|++|+++.|+.++....... +...+ .|..+. ...+.+...
T Consensus 16 ~~~~ilI----------tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~l~~~~~ 83 (251)
T PLN00141 16 KTKTVFV----------AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--SDKLVEAIG 83 (251)
T ss_pred cCCeEEE----------ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--HHHHHHHhh
Confidence 3578999 99999999999998888899999999887765433221 12211 233321 123333331
Q ss_pred CCcccEEEeCCCh
Q 019790 216 GKGVDVILDCMGA 228 (335)
Q Consensus 216 ~~~~d~vid~~g~ 228 (335)
.++|++|.+.|.
T Consensus 84 -~~~d~vi~~~g~ 95 (251)
T PLN00141 84 -DDSDAVICATGF 95 (251)
T ss_pred -cCCCEEEECCCC
Confidence 268999988764
No 331
>PLN03075 nicotianamine synthase; Provisional
Probab=94.28 E-value=0.25 Score=44.16 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=62.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcC-C----CEEEeCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLG-A----DVCINYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g-~----~~~~~~~~~~~~~~~~ 211 (335)
+.++|+- .| +|+.++.++.++..+ +.+++.++.+++..+.+++.- . ..-+.....+..+.
T Consensus 123 ~p~~Vld----------IG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~-- 189 (296)
T PLN03075 123 VPTKVAF----------VG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDV-- 189 (296)
T ss_pred CCCEEEE----------EC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhc--
Confidence 6677877 77 899999888888665 458999999999888776532 1 11111111222111
Q ss_pred HHhCCCcccEEEeCC------Ch--hhHHHhhccccCCCEEEEEe
Q 019790 212 EETGGKGVDVILDCM------GA--SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 212 ~~~~~~~~d~vid~~------g~--~~~~~~~~~l~~~G~~v~~g 248 (335)
....++||+||-.+ .. ..+....+.|++||.++.-.
T Consensus 190 -~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 190 -TESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred -ccccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 11124799999764 12 23678889999999887654
No 332
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.26 E-value=0.37 Score=42.99 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=57.7
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETG 215 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 215 (335)
..+.+++| +| +|.+|.+++..+...| .+|+++.|+.++.+.+.+ ++....+.. ..+. .+..
T Consensus 121 ~~~k~vlV----------lG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~~~~- 183 (278)
T PRK00258 121 LKGKRILI----------LG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----QEEL- 183 (278)
T ss_pred CCCCEEEE----------Ec-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----hhcc-
Confidence 34568888 88 6999999999999999 599999999888766643 332110111 0011 1111
Q ss_pred CCcccEEEeCCChhhH------HHhhccccCCCEEEEE
Q 019790 216 GKGVDVILDCMGASYF------QRNLGSLNIDGRLFII 247 (335)
Q Consensus 216 ~~~~d~vid~~g~~~~------~~~~~~l~~~G~~v~~ 247 (335)
..+|+||+|++.... ......++++..++.+
T Consensus 184 -~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~Di 220 (278)
T PRK00258 184 -ADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDM 220 (278)
T ss_pred -ccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence 368999999875431 1123455665555555
No 333
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.25 E-value=0.3 Score=35.58 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=53.5
Q ss_pred ccccchHHHHHHHHHhhCC---CeEEEE-ecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790 156 HGGSSGIGTFAIQMGKCQG---VRVFVT-AGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g---~~V~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 230 (335)
+| .|.+|.+.+.-+...| .+|+.. .+++++.+.+. +++..... . +..+.+. ..|+||-|+....
T Consensus 5 IG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~---~~~~~~~------~advvilav~p~~ 73 (96)
T PF03807_consen 5 IG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-D---DNEEAAQ------EADVVILAVKPQQ 73 (96)
T ss_dssp ES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-E---EHHHHHH------HTSEEEE-S-GGG
T ss_pred EC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-C---ChHHhhc------cCCEEEEEECHHH
Confidence 65 8999999999999999 789955 89999888875 45543322 1 1222222 3799999999877
Q ss_pred HHHhhccc---cCCCEEEEE
Q 019790 231 FQRNLGSL---NIDGRLFII 247 (335)
Q Consensus 231 ~~~~~~~l---~~~G~~v~~ 247 (335)
+...+..+ .++.-++++
T Consensus 74 ~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 74 LPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhhccCCCEEEEe
Confidence 65554443 445555554
No 334
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.24 E-value=0.32 Score=42.70 Aligned_cols=77 Identities=21% Similarity=0.256 Sum_probs=48.8
Q ss_pred CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhhH---HHH-HHcCCCEEE--eCCCc-cH---
Q 019790 139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVC-KDLGADVCI--NYKTE-DF--- 206 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~---~~~-~~~g~~~~~--~~~~~-~~--- 206 (335)
.+..+|| +|++ +++|.++++.+...|++|+++.++++.. +.+ ++++....+ |-.+. +.
T Consensus 9 ~~k~~lI----------tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 78 (258)
T PRK07533 9 AGKRGLV----------VGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAV 78 (258)
T ss_pred CCCEEEE----------ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHH
Confidence 4678999 9987 4899999999988999999998875432 222 233332223 22222 12
Q ss_pred HHHHHHHhCCCcccEEEeCCC
Q 019790 207 VARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.+.. +++|++++|+|
T Consensus 79 ~~~~~~~~--g~ld~lv~nAg 97 (258)
T PRK07533 79 FARIAEEW--GRLDFLLHSIA 97 (258)
T ss_pred HHHHHHHc--CCCCEEEEcCc
Confidence 22222222 36899999886
No 335
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=94.24 E-value=0.24 Score=44.07 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=37.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD 192 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~ 192 (335)
++.+++| .| +|+.+.+++..+...|+ +++++.|+.++.+.+.+
T Consensus 125 ~~~~vli----------lG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLI----------LG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEE----------EC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 5788999 88 79999999999999996 89999999998877764
No 336
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.22 E-value=0.23 Score=45.07 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=66.4
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCCEE----EeCCC----c
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC----INYKT----E 204 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~~~----~~~~~----~ 204 (335)
..+..++| +|+++++|..++.-+-..|++|+.++|+.++.+.+.+ + ....+ +|-.+ .
T Consensus 33 ~~~~~~vV----------TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~ 102 (314)
T KOG1208|consen 33 LSGKVALV----------TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVR 102 (314)
T ss_pred CCCcEEEE----------ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHH
Confidence 34568899 9999999999999999999999999999876655542 2 22222 22222 1
Q ss_pred cHHHHHHHHhCCCcccEEEeCCChh-----------------------h-HHHhhccccCC--CEEEEEeccCC
Q 019790 205 DFVARVKEETGGKGVDVILDCMGAS-----------------------Y-FQRNLGSLNID--GRLFIIGTQGG 252 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~~-----------------------~-~~~~~~~l~~~--G~~v~~g~~~~ 252 (335)
.+.+.+++ ...+.|+.++++|-- . ....++.|+.. +|+|.+.+...
T Consensus 103 ~fa~~~~~--~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 103 KFAEEFKK--KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred HHHHHHHh--cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 12333332 234789999988720 0 13345555544 89998876443
No 337
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.21 E-value=0.21 Score=46.84 Aligned_cols=80 Identities=24% Similarity=0.367 Sum_probs=51.5
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH-------HHHHc-CCCEE-EeCCCccH
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-------VCKDL-GADVC-INYKTEDF 206 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~-------~~~~~-g~~~~-~~~~~~~~ 206 (335)
+-..+.++|| .||+|.+|..++..+...|.+|++++|+..... ..... +...+ .|..+.+
T Consensus 56 ~~~~~~kVLV----------tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~- 124 (390)
T PLN02657 56 KEPKDVTVLV----------VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD- 124 (390)
T ss_pred cCCCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-
Confidence 3356778999 999999999999999989999999998765321 11111 22222 2333332
Q ss_pred HHHHHHHhCC--CcccEEEeCCCh
Q 019790 207 VARVKEETGG--KGVDVILDCMGA 228 (335)
Q Consensus 207 ~~~~~~~~~~--~~~d~vid~~g~ 228 (335)
.+.+...+ .++|+||.|++.
T Consensus 125 --~l~~~~~~~~~~~D~Vi~~aa~ 146 (390)
T PLN02657 125 --SLRKVLFSEGDPVDVVVSCLAS 146 (390)
T ss_pred --HHHHHHHHhCCCCcEEEECCcc
Confidence 22222211 169999998864
No 338
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.20 E-value=0.33 Score=42.66 Aligned_cols=78 Identities=21% Similarity=0.274 Sum_probs=48.3
Q ss_pred CCCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhH---HHHH-HcCCCEE--EeCCCcc-HH-
Q 019790 138 SPGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCK-DLGADVC--INYKTED-FV- 207 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~---~~~~-~~g~~~~--~~~~~~~-~~- 207 (335)
..+..+|| +|+++ ++|.++++.+...|++|++..+++... +.+. +.+.... .|-.+.. ..
T Consensus 6 ~~~k~~lI----------TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~ 75 (260)
T PRK06603 6 LQGKKGLI----------TGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISN 75 (260)
T ss_pred cCCcEEEE----------ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHH
Confidence 35678899 99876 799999988888899999988774322 2222 2343222 2333322 22
Q ss_pred --HHHHHHhCCCcccEEEeCCC
Q 019790 208 --ARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 208 --~~~~~~~~~~~~d~vid~~g 227 (335)
+.+.+.. +++|++++++|
T Consensus 76 ~~~~~~~~~--g~iDilVnnag 95 (260)
T PRK06603 76 LFDDIKEKW--GSFDFLLHGMA 95 (260)
T ss_pred HHHHHHHHc--CCccEEEEccc
Confidence 2222222 36999999876
No 339
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.19 E-value=0.49 Score=44.72 Aligned_cols=74 Identities=9% Similarity=0.152 Sum_probs=52.8
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETG 215 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 215 (335)
-.+.++|| .| +|.+|.+++..+...|+ +++++.|+.++.+.+. .++...+.. + +.+.+...
T Consensus 179 l~~kkvlv----------iG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-----~-~~l~~~l~ 241 (414)
T PRK13940 179 ISSKNVLI----------IG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-----L-SELPQLIK 241 (414)
T ss_pred ccCCEEEE----------Ec-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-----H-HHHHHHhc
Confidence 45678888 88 79999999999999997 7999999988766655 454222221 1 23333332
Q ss_pred CCcccEEEeCCChhh
Q 019790 216 GKGVDVILDCMGASY 230 (335)
Q Consensus 216 ~~~~d~vid~~g~~~ 230 (335)
.+|+||.|+++..
T Consensus 242 --~aDiVI~aT~a~~ 254 (414)
T PRK13940 242 --KADIIIAAVNVLE 254 (414)
T ss_pred --cCCEEEECcCCCC
Confidence 5899999999865
No 340
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.17 E-value=0.34 Score=43.78 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=48.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhH----HHHHHcCCCEEE---eCCCccHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADVCI---NYKTEDFVARV 210 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~----~~~~~~g~~~~~---~~~~~~~~~~~ 210 (335)
.+.++|| +|+++.+|...+..+...|++|++.+++. ... +.++..+..... |-.+.+-...+
T Consensus 11 ~~k~~lV----------TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~ 80 (306)
T PRK07792 11 SGKVAVV----------TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADEL 80 (306)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 4678999 99999999999999988999999987642 222 222333433222 22222111121
Q ss_pred HH-HhCCCcccEEEeCCCh
Q 019790 211 KE-ETGGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~-~~~~~~~d~vid~~g~ 228 (335)
.+ .....++|++|.++|.
T Consensus 81 ~~~~~~~g~iD~li~nAG~ 99 (306)
T PRK07792 81 VATAVGLGGLDIVVNNAGI 99 (306)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 11 1112369999998873
No 341
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.17 E-value=0.29 Score=43.49 Aligned_cols=103 Identities=18% Similarity=0.212 Sum_probs=63.6
Q ss_pred CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHH-HHcCCCEE--EeCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVC--INYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~-~~~g~~~~--~~~~~~~-~~~~ 209 (335)
.+..+|| +|++ +++|.++++.+-..|++|+++.++++ +.+.+ .+++.... .|-.+.+ ..+.
T Consensus 4 ~~k~~lI----------tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 73 (274)
T PRK08415 4 KGKKGLI----------VGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSL 73 (274)
T ss_pred CCcEEEE----------ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHH
Confidence 3678899 9986 79999999999889999999988753 23333 23443322 3333322 2222
Q ss_pred HHHHhC-CCcccEEEeCCChh---------------hH---------------HHhhccccCCCEEEEEeccC
Q 019790 210 VKEETG-GKGVDVILDCMGAS---------------YF---------------QRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 210 ~~~~~~-~~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~ 251 (335)
+.+... ..++|++++++|.. .+ +..++.+..+|+++.++...
T Consensus 74 ~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 74 AESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred HHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 222111 13689999998731 01 23455666789998886654
No 342
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.17 E-value=0.24 Score=45.56 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=49.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHc--CCCE-EEeCCCccHHHHHHHHh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL--GADV-CINYKTEDFVARVKEET 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~--g~~~-~~~~~~~~~~~~~~~~~ 214 (335)
.+.++|| +||+|.+|..+++.+...|.+|+++.++....... ..+ +... .+..+-.+ .+.+.+..
T Consensus 3 ~~k~ilI----------tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~ 71 (349)
T TIGR02622 3 QGKKVLV----------TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAI 71 (349)
T ss_pred CCCEEEE----------ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHH
Confidence 3578999 99999999999999999999999998765543222 111 1111 12111111 22344443
Q ss_pred CCCcccEEEeCCC
Q 019790 215 GGKGVDVILDCMG 227 (335)
Q Consensus 215 ~~~~~d~vid~~g 227 (335)
...++|+||.+++
T Consensus 72 ~~~~~d~vih~A~ 84 (349)
T TIGR02622 72 AEFKPEIVFHLAA 84 (349)
T ss_pred hhcCCCEEEECCc
Confidence 3336899999887
No 343
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.16 E-value=0.76 Score=41.45 Aligned_cols=58 Identities=26% Similarity=0.398 Sum_probs=48.6
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEEe
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCIN 200 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~ 200 (335)
....+.||.+.|| -.-+|.+|...+.++..+|++++++.. +.++...++++|+..+..
T Consensus 96 ~~G~i~pg~stli----------EpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLI----------EPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEE----------ecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 4467899999999 677899999999999999999998874 667888888999877653
No 344
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.15 E-value=1.3 Score=39.46 Aligned_cols=147 Identities=18% Similarity=0.156 Sum_probs=89.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-----------ccH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-----------EDF 206 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~ 206 (335)
-+..++++ .| .|..|+.++..++.+|+-|........+.+..+++|+...-..+. .+|
T Consensus 162 v~pA~vlv----------~G-~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~ 230 (356)
T COG3288 162 VSPAKVLV----------IG-AGVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEF 230 (356)
T ss_pred ccchhhhh----------hh-HHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHH
Confidence 34456677 66 799999999999999999999887777777777777654321111 122
Q ss_pred HH----HHHHHhCCCcccEEEeCC--Chh-----hHHHhhccccCCCEEEEEeccCCCccc--cChhHHhhcceEEEEee
Q 019790 207 VA----RVKEETGGKGVDVILDCM--GAS-----YFQRNLGSLNIDGRLFIIGTQGGAKTE--LNITSLFAKRLTVQAAG 273 (335)
Q Consensus 207 ~~----~~~~~~~~~~~d~vid~~--g~~-----~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~ 273 (335)
.. .+.+.. +++|+||-+. .+. ....+...|+|++.++.+....+.+-+ -+......++.++.|..
T Consensus 231 ~~~q~~~~a~~~--~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 231 IAKQAELVAEQA--KEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHHHHHHHh--cCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 21 122222 4799999865 222 246789999999999988555443222 22233345577777643
Q ss_pred -ccccchhhHHHHHHHHHHHHHHHH
Q 019790 274 -LRSRSTENKALIVSEVEKNVWPAI 297 (335)
Q Consensus 274 -~~~~~~~~~~~~~~~~~~~~~~~~ 297 (335)
+..+...+...++...+-.+++++
T Consensus 309 nlp~r~a~~aS~LYa~Nl~~~l~ll 333 (356)
T COG3288 309 NLPGRLAAQASQLYATNLVNLLKLL 333 (356)
T ss_pred CcchhhhhhHHHHHHHHHHHHHHHH
Confidence 333333333334444333344443
No 345
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.14 E-value=0.15 Score=44.73 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=53.9
Q ss_pred EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 221 (335)
Q Consensus 142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (335)
+||| .||+|- |..++..+...|.+|+++++++...+.+...+...+..... + .+.+.+.....++|+
T Consensus 2 ~ILv----------lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l-~-~~~l~~~l~~~~i~~ 68 (256)
T TIGR00715 2 TVLL----------MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGAL-D-PQELREFLKRHSIDI 68 (256)
T ss_pred eEEE----------EechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCC-C-HHHHHHHHHhcCCCE
Confidence 6888 998886 99888888888999999999988777777665544442221 1 233556666668999
Q ss_pred EEeCCCh
Q 019790 222 ILDCMGA 228 (335)
Q Consensus 222 vid~~g~ 228 (335)
|+|++-.
T Consensus 69 VIDAtHP 75 (256)
T TIGR00715 69 LVDATHP 75 (256)
T ss_pred EEEcCCH
Confidence 9998864
No 346
>PLN02244 tocopherol O-methyltransferase
Probab=94.13 E-value=0.091 Score=48.35 Aligned_cols=94 Identities=15% Similarity=0.101 Sum_probs=61.4
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCccHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARV 210 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~ 210 (335)
.++++||- .| ++.|..+..+++..|++|++++.++...+.+++ .+.. .....+....
T Consensus 117 ~~~~~VLD----------iG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~---- 180 (340)
T PLN02244 117 KRPKRIVD----------VG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ---- 180 (340)
T ss_pred CCCCeEEE----------ec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC----
Confidence 67788877 66 556778888888889999999999887776654 2321 1111111110
Q ss_pred HHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEec
Q 019790 211 KEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 249 (335)
-...+.||+|+-.-.. ..+..+.+.|+++|+++....
T Consensus 181 --~~~~~~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 181 --PFEDGQFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred --CCCCCCccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0123479999864332 235678899999999987643
No 347
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.33 Score=43.01 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=50.7
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--C-EEE--eCCCccHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCI--NYKTEDFVARV 210 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~-~~~--~~~~~~~~~~~ 210 (335)
+.++|| +|++|.+|..++..+...|++|++++++.+..+...+ .+. . ..+ |..+....+.+
T Consensus 3 ~k~~lI----------tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 72 (280)
T PRK06914 3 KKIAIV----------TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNF 72 (280)
T ss_pred CCEEEE----------ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHH
Confidence 457899 9999999999999998899999999988776544432 221 1 122 33332211113
Q ss_pred HHHh-CCCcccEEEeCCCh
Q 019790 211 KEET-GGKGVDVILDCMGA 228 (335)
Q Consensus 211 ~~~~-~~~~~d~vid~~g~ 228 (335)
.+.. ...++|+++.|+|.
T Consensus 73 ~~~~~~~~~id~vv~~ag~ 91 (280)
T PRK06914 73 QLVLKEIGRIDLLVNNAGY 91 (280)
T ss_pred HHHHHhcCCeeEEEECCcc
Confidence 2221 11368999998863
No 348
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.07 E-value=0.89 Score=41.54 Aligned_cols=101 Identities=14% Similarity=0.130 Sum_probs=66.2
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHH-hhCCC-eEEEEecChhhHHHHHH-----cCCCEEEeCCCccHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVCKD-----LGADVCINYKTEDFVARV 210 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a-~~~g~-~V~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~ 210 (335)
....+++| .| +|..|...+..+ ...++ +|.+..+++++.+.+.+ ++.... ... ++.+.+
T Consensus 125 ~~~~~v~i----------iG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~--~~~~~~ 190 (325)
T PRK08618 125 EDAKTLCL----------IG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVN--SADEAI 190 (325)
T ss_pred CCCcEEEE----------EC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC--CHHHHH
Confidence 34567888 77 899998776554 44576 78888999887765542 233221 121 122222
Q ss_pred HHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccCh
Q 019790 211 KEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 259 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 259 (335)
...|+|+.|+++..-... .+++++-.+..+|.......+++.
T Consensus 191 ------~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 191 ------EEADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred ------hcCCEEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 258999999998653334 888998898999887655555665
No 349
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.05 E-value=0.46 Score=42.28 Aligned_cols=96 Identities=17% Similarity=0.175 Sum_probs=65.3
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+|+........|....---.|.+++| .|.+..+|.-++.++...|++|++...
T Consensus 138 ~PcTp~aii~lL~~~~i~l~Gk~vvV----------iGrs~iVGkPla~lL~~~~atVt~~hs----------------- 190 (285)
T PRK14189 138 RPCTPYGVMKMLESIGIPLRGAHAVV----------IGRSNIVGKPMAMLLLQAGATVTICHS----------------- 190 (285)
T ss_pred cCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEecC-----------------
Confidence 44444444444533322247889999 998888899999999999999987431
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+.++. +.+ +..|+++-++|...+-. -+.++++-.++.+|...
T Consensus 191 --~t~~l~----~~~--~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 191 --KTRDLA----AHT--RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred --CCCCHH----HHh--hhCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 122222 222 24899999999876422 27889998889988643
No 350
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.01 E-value=0.46 Score=41.77 Aligned_cols=78 Identities=17% Similarity=0.282 Sum_probs=48.0
Q ss_pred CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCcc-H---
Q 019790 139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTED-F--- 206 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~-~--- 206 (335)
.+..+|| +|| ++++|.++++.+...|++|+++.+++...+.++ +.+....+ |-.+.+ .
T Consensus 5 ~~k~~lI----------TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 74 (261)
T PRK08690 5 QGKKILI----------TGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQV 74 (261)
T ss_pred CCcEEEE----------ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHH
Confidence 4678999 996 669999999999889999998866543333332 22322222 322222 2
Q ss_pred HHHHHHHhCCCcccEEEeCCCh
Q 019790 207 VARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~ 228 (335)
.+.+.+.. .++|++++|+|-
T Consensus 75 ~~~~~~~~--g~iD~lVnnAG~ 94 (261)
T PRK08690 75 FADLGKHW--DGLDGLVHSIGF 94 (261)
T ss_pred HHHHHHHh--CCCcEEEECCcc
Confidence 22222222 369999998863
No 351
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.01 E-value=0.54 Score=37.56 Aligned_cols=93 Identities=16% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETG 215 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 215 (335)
.++.+++| .| .|.+|...++.+...| .+|++.+++.++.+.+. +++... +.....+.. +.
T Consensus 17 ~~~~~i~i----------iG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~----~~-- 78 (155)
T cd01065 17 LKGKKVLI----------LG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLE----EL-- 78 (155)
T ss_pred CCCCEEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchh----hc--
Confidence 44678888 87 5999999999988886 68999999887766543 444321 000111111 11
Q ss_pred CCcccEEEeCCChhhH-----HHhhccccCCCEEEEEe
Q 019790 216 GKGVDVILDCMGASYF-----QRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 216 ~~~~d~vid~~g~~~~-----~~~~~~l~~~G~~v~~g 248 (335)
-..+|+|+.|++.... ......++++..++.++
T Consensus 79 ~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~ 116 (155)
T cd01065 79 LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVV 116 (155)
T ss_pred cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence 1368999999987542 11122345555555554
No 352
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=93.95 E-value=0.36 Score=38.89 Aligned_cols=73 Identities=26% Similarity=0.312 Sum_probs=43.8
Q ss_pred ccccchHHHHHHHHHhhCCC-eEEEEecC--hhhHHHH----HHcCCCE-EE--eCCCc-cHHHHHHHHh-CCCcccEEE
Q 019790 156 HGGSSGIGTFAIQMGKCQGV-RVFVTAGS--EEKLAVC----KDLGADV-CI--NYKTE-DFVARVKEET-GGKGVDVIL 223 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~-~V~~~~~~--~~~~~~~----~~~g~~~-~~--~~~~~-~~~~~~~~~~-~~~~~d~vi 223 (335)
+|+++++|.++++.+-..|+ +|+++.++ .++.+.+ +..+... .+ |..+. +....+.+.. ...++|++|
T Consensus 6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li 85 (167)
T PF00106_consen 6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILI 85 (167)
T ss_dssp ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEE
T ss_pred ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999988888876 77888888 3443333 3344322 22 22222 1222222221 124799999
Q ss_pred eCCCh
Q 019790 224 DCMGA 228 (335)
Q Consensus 224 d~~g~ 228 (335)
.|.|.
T Consensus 86 ~~ag~ 90 (167)
T PF00106_consen 86 NNAGI 90 (167)
T ss_dssp EECSC
T ss_pred ccccc
Confidence 98873
No 353
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.94 E-value=0.33 Score=41.32 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=49.2
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCC-Cc
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG-KG 218 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~ 218 (335)
.++|| .||+|.+|..++..+... ++|+++.++.++.+.+.+ .....++..+-.+ .+.+.+.... .+
T Consensus 4 ~~vlV----------tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~ 71 (227)
T PRK08219 4 PTALI----------TGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTD-PEAIAAAVEQLGR 71 (227)
T ss_pred CEEEE----------ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCC-HHHHHHHHHhcCC
Confidence 46889 999999999998887777 999999998877655543 2111222222222 1233333221 26
Q ss_pred ccEEEeCCCh
Q 019790 219 VDVILDCMGA 228 (335)
Q Consensus 219 ~d~vid~~g~ 228 (335)
.|.+|.++|.
T Consensus 72 id~vi~~ag~ 81 (227)
T PRK08219 72 LDVLVHNAGV 81 (227)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 354
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=93.93 E-value=0.83 Score=36.95 Aligned_cols=87 Identities=16% Similarity=0.031 Sum_probs=53.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.+||| .| .|.+|..-++.+...|++|+++. ++..+.+.+++.-. +... .+.+ ..-.+
T Consensus 12 ~~~~vlV----------vG-GG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~~~~--~~~~-----~dl~~ 70 (157)
T PRK06719 12 HNKVVVI----------IG-GGKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-WKQK--TFSN-----DDIKD 70 (157)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-EEec--ccCh-----hcCCC
Confidence 4677888 77 59999988888888899999885 33334444444211 2111 1111 11246
Q ss_pred ccEEEeCCChhhHHHhhccccCCCEEEE
Q 019790 219 VDVILDCMGASYFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 219 ~d~vid~~g~~~~~~~~~~l~~~G~~v~ 246 (335)
+|+|+-+++.+..+..+......+.++-
T Consensus 71 a~lViaaT~d~e~N~~i~~~a~~~~~vn 98 (157)
T PRK06719 71 AHLIYAATNQHAVNMMVKQAAHDFQWVN 98 (157)
T ss_pred ceEEEECCCCHHHHHHHHHHHHHCCcEE
Confidence 8999999998776655444433333433
No 355
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.92 E-value=0.63 Score=41.42 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=64.7
Q ss_pred CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
+|+........|.. -++ -.|.+++| .|.+..+|.-++.++...|++|++.-..
T Consensus 137 ~PcTp~avi~lL~~-~~i~l~Gk~vvV----------vGrs~~VG~Pla~lL~~~gAtVtv~hs~--------------- 190 (285)
T PRK14191 137 VPATPMGVMRLLKH-YHIEIKGKDVVI----------IGASNIVGKPLAMLMLNAGASVSVCHIL--------------- 190 (285)
T ss_pred CCCcHHHHHHHHHH-hCCCCCCCEEEE----------ECCCchhHHHHHHHHHHCCCEEEEEeCC---------------
Confidence 45555555554533 333 36889999 9987899999999999999998876321
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
+. .+.+.+ +..|+++-++|...+.. -+.++++..++.+|...
T Consensus 191 ----t~----~l~~~~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 191 ----TK----DLSFYT--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred ----cH----HHHHHH--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 11 122222 25899999999876522 34668888888988643
No 356
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=93.92 E-value=1.2 Score=37.65 Aligned_cols=91 Identities=9% Similarity=0.035 Sum_probs=54.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
.+.++|| .| .|.+|...+..+...|++|+++.+... +...+...+. ..+...... ... -.
T Consensus 9 ~~k~vLV----------IG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~------l~ 69 (202)
T PRK06718 9 SNKRVVI----------VG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSD------IV 69 (202)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhh------cC
Confidence 4567888 78 599999988888888999999975432 2222222221 122211111 111 13
Q ss_pred cccEEEeCCChhhHHHhhccccCCCEEEEEe
Q 019790 218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g 248 (335)
++|+||-|++....+..+......+.++...
T Consensus 70 ~adlViaaT~d~elN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 70 DAFLVIAATNDPRVNEQVKEDLPENALFNVI 100 (202)
T ss_pred CceEEEEcCCCHHHHHHHHHHHHhCCcEEEC
Confidence 6899999999877655444443445555543
No 357
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.91 E-value=0.39 Score=41.64 Aligned_cols=80 Identities=21% Similarity=0.234 Sum_probs=48.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH----HHcCCCE-EE--eCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-CI--NYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~----~~~g~~~-~~--~~~~~~-~~~~ 209 (335)
++.++|| .|++|.+|..++..+...|++|++. .++.++.+.+ +..+... .+ |-.+.. ....
T Consensus 3 ~~~~vlI----------tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 72 (250)
T PRK08063 3 SGKVALV----------TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEM 72 (250)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 3568999 9999999999999999999998764 5665544332 2233322 22 322222 1222
Q ss_pred HHHHh-CCCcccEEEeCCCh
Q 019790 210 VKEET-GGKGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~-~~~~~d~vid~~g~ 228 (335)
+.+.. ...++|++|.++|.
T Consensus 73 ~~~~~~~~~~id~vi~~ag~ 92 (250)
T PRK08063 73 FAQIDEEFGRLDVFVNNAAS 92 (250)
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 22211 11268999998873
No 358
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.89 E-value=0.4 Score=41.26 Aligned_cols=37 Identities=35% Similarity=0.452 Sum_probs=31.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 185 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~ 185 (335)
.+.++|| .|++|.+|..++..+...|++|+++.++..
T Consensus 4 ~~~~vlI----------tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALV----------TGASRGIGRAIAERLAAQGANVVINYASSE 40 (248)
T ss_pred CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence 3468999 999999999999999999999988776544
No 359
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.88 E-value=0.43 Score=42.26 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=49.7
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccHHHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKE 212 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~ 212 (335)
..+++| +|++|.+|..+++.+...|++|+++.++.++.+... ..+.... .|..+......+.+
T Consensus 10 ~~~vlV----------tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 79 (274)
T PRK07775 10 RRPALV----------AGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVA 79 (274)
T ss_pred CCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 457899 999999999999999889999999998776554332 2333222 13333221111111
Q ss_pred Hh--CCCcccEEEeCCCh
Q 019790 213 ET--GGKGVDVILDCMGA 228 (335)
Q Consensus 213 ~~--~~~~~d~vid~~g~ 228 (335)
.. .-.++|.+|.++|.
T Consensus 80 ~~~~~~~~id~vi~~Ag~ 97 (274)
T PRK07775 80 QAEEALGEIEVLVSGAGD 97 (274)
T ss_pred HHHHhcCCCCEEEECCCc
Confidence 11 11368999998864
No 360
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.88 E-value=0.3 Score=43.27 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=49.4
Q ss_pred CCCCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHH-HHcCCCEEE--eCCCcc-HH
Q 019790 137 LSPGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVCI--NYKTED-FV 207 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~-~~~g~~~~~--~~~~~~-~~ 207 (335)
+..+.++|| +|++ +++|.+++..+...|++|+++.+++. +.+.+ ++++....+ |-.+.. ..
T Consensus 7 ~~~~k~~lI----------tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~ 76 (272)
T PRK08159 7 LMAGKRGLI----------LGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASID 76 (272)
T ss_pred cccCCEEEE----------ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHH
Confidence 345678999 9986 79999999999999999998877642 33333 234432222 332222 22
Q ss_pred HHHHHHhC-CCcccEEEeCCC
Q 019790 208 ARVKEETG-GKGVDVILDCMG 227 (335)
Q Consensus 208 ~~~~~~~~-~~~~d~vid~~g 227 (335)
+.+.+... ..++|++++++|
T Consensus 77 ~~~~~~~~~~g~iD~lv~nAG 97 (272)
T PRK08159 77 AVFETLEKKWGKLDFVVHAIG 97 (272)
T ss_pred HHHHHHHHhcCCCcEEEECCc
Confidence 22222111 136899999886
No 361
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=93.84 E-value=0.18 Score=42.95 Aligned_cols=97 Identities=23% Similarity=0.110 Sum_probs=59.2
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE--EEeCCCccH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDF 206 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~ 206 (335)
...++.++++||- .| ++.|..+..+++.. .+|+.++.+++..+.+++ .+... +...+..
T Consensus 72 ~~l~~~~~~~VLe----------iG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-- 136 (212)
T PRK00312 72 ELLELKPGDRVLE----------IG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGW-- 136 (212)
T ss_pred HhcCCCCCCEEEE----------EC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcc--
Confidence 4567788999988 76 33455555566553 489999988887666643 33322 1111111
Q ss_pred HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790 207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g 248 (335)
+. ....+.||+|+-...... .....+.|+++|+++..-
T Consensus 137 -~~---~~~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 137 -KG---WPAYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred -cC---CCcCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 10 111247999886544333 456788999999987653
No 362
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.79 E-value=0.36 Score=41.63 Aligned_cols=41 Identities=27% Similarity=0.379 Sum_probs=34.0
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC 190 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~ 190 (335)
+.++|| .|++|.+|..++..+...|++|+++ .++.++.+.+
T Consensus 5 ~~~ilI----------~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~ 46 (247)
T PRK05565 5 GKVAIV----------TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQEL 46 (247)
T ss_pred CCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 458999 9999999999998888889999998 8876655443
No 363
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.77 E-value=0.33 Score=42.77 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=47.5
Q ss_pred CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChh---hHHHHHH-cCCCEEE--eCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~-~~~~ 209 (335)
.+.++|| +|+++ ++|.+++..+-..|++|+++.+++. ..+.+.. .+....+ |-.+.+ +.+.
T Consensus 5 ~~k~~lI----------TGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 74 (262)
T PRK07984 5 SGKRILV----------TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAM 74 (262)
T ss_pred CCCEEEE----------eCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHH
Confidence 4678999 99875 8999999888888999998887642 2222222 2222222 333322 2222
Q ss_pred HHHHhC-CCcccEEEeCCC
Q 019790 210 VKEETG-GKGVDVILDCMG 227 (335)
Q Consensus 210 ~~~~~~-~~~~d~vid~~g 227 (335)
+.+... ..++|++|+++|
T Consensus 75 ~~~~~~~~g~iD~linnAg 93 (262)
T PRK07984 75 FAELGKVWPKFDGFVHSIG 93 (262)
T ss_pred HHHHHhhcCCCCEEEECCc
Confidence 222211 136899999987
No 364
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.16 Score=44.44 Aligned_cols=74 Identities=31% Similarity=0.436 Sum_probs=48.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHH----HHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFV----ARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~----~~~~~~ 213 (335)
.+.++|| .|+++.+|..+++.+...|++|+++.+++.... ..... ...|-.+.+.. +.+.+.
T Consensus 8 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 8 AGKRALV----------TGGTKGIGAATVARLLEAGARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CCCEEEE----------ECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 4678999 999999999999999999999999998764321 11111 11233332211 122222
Q ss_pred hCCCcccEEEeCCC
Q 019790 214 TGGKGVDVILDCMG 227 (335)
Q Consensus 214 ~~~~~~d~vid~~g 227 (335)
. .++|++++++|
T Consensus 75 ~--~~id~vi~~ag 86 (260)
T PRK06523 75 L--GGVDILVHVLG 86 (260)
T ss_pred c--CCCCEEEECCc
Confidence 2 36899999887
No 365
>PRK06483 dihydromonapterin reductase; Provisional
Probab=93.75 E-value=0.56 Score=40.33 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=50.1
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HHHHHHcCCCE-EEeCCCc-cHHHHHHHHhC-
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADV-CINYKTE-DFVARVKEETG- 215 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~~g~~~-~~~~~~~-~~~~~~~~~~~- 215 (335)
+.++|| .|+++.+|.++++.+...|++|+++.++++. .+.++..+... ..|-.+. ...+.+.+...
T Consensus 2 ~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 71 (236)
T PRK06483 2 PAPILI----------TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQH 71 (236)
T ss_pred CceEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 357899 9999999999999998899999999987653 23344444322 1232222 22222222211
Q ss_pred CCcccEEEeCCCh
Q 019790 216 GKGVDVILDCMGA 228 (335)
Q Consensus 216 ~~~~d~vid~~g~ 228 (335)
-.++|+++.++|.
T Consensus 72 ~~~id~lv~~ag~ 84 (236)
T PRK06483 72 TDGLRAIIHNASD 84 (236)
T ss_pred CCCccEEEECCcc
Confidence 1258999998873
No 366
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.74 E-value=0.39 Score=41.54 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=34.5
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 190 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~ 190 (335)
.+++| .||+|.+|...++.+...|++|+++++++++.+..
T Consensus 2 ~~vlI----------tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~ 41 (243)
T PRK07102 2 KKILI----------IGATSDIARACARRYAAAGARLYLAARDVERLERL 41 (243)
T ss_pred cEEEE----------EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 36888 99999999999999999999999999988765443
No 367
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.73 E-value=0.35 Score=42.00 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
++.++|| .|+++.+|..++..+...|++|+++.++.
T Consensus 7 ~~k~vlI----------tGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWV----------TGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 4578999 99999999999999988999999999876
No 368
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.70 E-value=0.35 Score=48.90 Aligned_cols=115 Identities=19% Similarity=0.263 Sum_probs=69.5
Q ss_pred ceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhh
Q 019790 93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172 (335)
Q Consensus 93 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~ 172 (335)
+..+|..+++...+.+ +..+.+++=.-..+ ...--.+.++|| +|++|.+|.++++.+..
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLV----------TGasggIG~aiA~~La~ 436 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFV----------TGGAGGIGRETARRLAA 436 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEE----------eCCCcHHHHHHHHHHHh
Confidence 3466777777777766 55666665310000 011124678999 99999999999999999
Q ss_pred CCCeEEEEecChhhHHHHH-H----cCCCE----EEeCCCcc-HHHHHHHHh-CCCcccEEEeCCCh
Q 019790 173 QGVRVFVTAGSEEKLAVCK-D----LGADV----CINYKTED-FVARVKEET-GGKGVDVILDCMGA 228 (335)
Q Consensus 173 ~g~~V~~~~~~~~~~~~~~-~----~g~~~----~~~~~~~~-~~~~~~~~~-~~~~~d~vid~~g~ 228 (335)
.|++|++++++.+..+.+. . .+... ..|-.+.. +.+.+.+.. ...++|++|.++|.
T Consensus 437 ~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 437 EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 9999999999877655443 1 12211 12333322 222222211 11369999998873
No 369
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.69 E-value=0.32 Score=43.19 Aligned_cols=77 Identities=23% Similarity=0.456 Sum_probs=53.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh----HHHHHHcCCC--EEEeCCC-cc---HHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGAD--VCINYKT-ED---FVA 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~----~~~~~~~g~~--~~~~~~~-~~---~~~ 208 (335)
.|+.+|| +||.+++|.+.++=+-.+|+++++.+.+.+. .+.+++.|.. .+.|-.+ ++ ..+
T Consensus 37 ~g~~vLI----------TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~ 106 (300)
T KOG1201|consen 37 SGEIVLI----------TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAK 106 (300)
T ss_pred cCCEEEE----------eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHH
Confidence 6889999 9999999998888777889988888766543 3444444422 2233333 22 345
Q ss_pred HHHHHhCCCcccEEEeCCC
Q 019790 209 RVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g 227 (335)
++++..+ .+|++++++|
T Consensus 107 ~Vk~e~G--~V~ILVNNAG 123 (300)
T KOG1201|consen 107 KVKKEVG--DVDILVNNAG 123 (300)
T ss_pred HHHHhcC--CceEEEeccc
Confidence 6666654 6999999887
No 370
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=93.68 E-value=0.45 Score=44.55 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=54.2
Q ss_pred ccccchHHHHHHHHHhhCC-C-eEEEEecChhhHHHHHH--cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790 156 HGGSSGIGTFAIQMGKCQG-V-RVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g-~-~V~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 231 (335)
+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+ .+.....-.-+..-.+.+.+... +.|+|++|+|....
T Consensus 4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR--GCDVVINCAGPFFG 80 (386)
T ss_dssp E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE-SSGGGH
T ss_pred EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh--cCCEEEECCccchh
Confidence 887 999999999988886 4 89999999999877754 22222111111111234666654 46999999997643
Q ss_pred HH-hhccccCCCEEEE
Q 019790 232 QR-NLGSLNIDGRLFI 246 (335)
Q Consensus 232 ~~-~~~~l~~~G~~v~ 246 (335)
.. +-.++..+-.++.
T Consensus 81 ~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 81 EPVARACIEAGVHYVD 96 (386)
T ss_dssp HHHHHHHHHHT-EEEE
T ss_pred HHHHHHHHHhCCCeec
Confidence 33 3445555666666
No 371
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=93.67 E-value=0.07 Score=27.88 Aligned_cols=22 Identities=45% Similarity=0.795 Sum_probs=14.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC
Q 019790 1 MKAIVITQPGSPEVLQLQEVEDPQI 25 (335)
Q Consensus 1 mka~~~~~~~~~~~l~~~~~~~~~~ 25 (335)
|||+++..+++ +++++++.|.+
T Consensus 1 MkAv~y~G~~~---v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD---VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE---EEEEEE----S
T ss_pred CcceEEeCCCc---eEEEECCCccc
Confidence 99999998765 89999998865
No 372
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.67 E-value=1.9 Score=32.42 Aligned_cols=88 Identities=22% Similarity=0.166 Sum_probs=60.4
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF---- 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~---- 231 (335)
.| .|.+|...++.++..+.+|++++.++++.+.+++.+.. ++..+..+. ...+..+-..++.++-+++.+..
T Consensus 4 ~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~--~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 4 IG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP--EVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp ES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH--HHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred Ec-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh--hHHhhcCccccCEEEEccCCHHHHHHH
Confidence 55 79999999999999777999999999999999988854 443433332 22333344578999988877542
Q ss_pred HHhhccccCCCEEEEE
Q 019790 232 QRNLGSLNIDGRLFII 247 (335)
Q Consensus 232 ~~~~~~l~~~G~~v~~ 247 (335)
...++.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 2334555666777655
No 373
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.45 Score=42.61 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=32.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
.+.++|| .|+++.+|..++..+...|++|+++.++.
T Consensus 45 ~~k~iLI----------tGasggIG~~la~~l~~~G~~V~l~~r~~ 80 (290)
T PRK06701 45 KGKVALI----------TGGDSGIGRAVAVLFAKEGADIAIVYLDE 80 (290)
T ss_pred CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4678999 99999999999999888999999998764
No 374
>PRK05855 short chain dehydrogenase; Validated
Probab=93.61 E-value=0.37 Score=47.39 Aligned_cols=78 Identities=22% Similarity=0.282 Sum_probs=52.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCccHH----
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFV---- 207 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~---- 207 (335)
.+.++|| +||+|.+|.++++.+...|++|+++.++.++.+.+. ..|... . .|-.+....
T Consensus 314 ~~~~~lv----------~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~ 383 (582)
T PRK05855 314 SGKLVVV----------TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFA 383 (582)
T ss_pred CCCEEEE----------ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 4568999 999999999999999999999999999887665443 233322 1 233332211
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|++|+++|.
T Consensus 384 ~~~~~~~--g~id~lv~~Ag~ 402 (582)
T PRK05855 384 EWVRAEH--GVPDIVVNNAGI 402 (582)
T ss_pred HHHHHhc--CCCcEEEECCcc
Confidence 2222222 368999999874
No 375
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.60 E-value=0.42 Score=40.99 Aligned_cols=99 Identities=19% Similarity=0.137 Sum_probs=58.8
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE---------EeCCCcc
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---------INYKTED 205 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~---------~~~~~~~ 205 (335)
.+.++.+||+ .| .+.|.-+..+|. .|++|++++.++...+.+. +.+.... .....-.
T Consensus 34 ~~~~~~rvL~----------~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~ 100 (218)
T PRK13255 34 ALPAGSRVLV----------PL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEIT 100 (218)
T ss_pred CCCCCCeEEE----------eC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceE
Confidence 3456778999 55 667888888876 5999999999999887653 3322110 0000000
Q ss_pred -HHHHHHHHh--CCCcccEEEeCCC-----h----hhHHHhhccccCCCEEEEE
Q 019790 206 -FVARVKEET--GGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 206 -~~~~~~~~~--~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~ 247 (335)
+...+.+.. ....||.|+|... . ..+..+.+.|+++|++.++
T Consensus 101 ~~~~D~~~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 101 IYCGDFFALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred EEECcccCCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 001111111 1136899999553 1 2256778899999975543
No 376
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.56 E-value=0.5 Score=40.90 Aligned_cols=80 Identities=25% Similarity=0.333 Sum_probs=47.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCc-cHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTE-DFVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~-~~~~~ 209 (335)
.+.++|| .|+++.+|..++..+...|++|+++.+ +++..+.. ++.+... .+ |..+. .+.+.
T Consensus 5 ~~~~~lI----------tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~ 74 (247)
T PRK12935 5 NGKVAIV----------TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRL 74 (247)
T ss_pred CCCEEEE----------ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 3678999 999999999999988889999887654 33433332 2233222 12 22221 12222
Q ss_pred HHHHhC-CCcccEEEeCCCh
Q 019790 210 VKEETG-GKGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~~-~~~~d~vid~~g~ 228 (335)
+.+... -..+|++|.|+|.
T Consensus 75 ~~~~~~~~~~id~vi~~ag~ 94 (247)
T PRK12935 75 VEEAVNHFGKVDILVNNAGI 94 (247)
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 222111 1358999998874
No 377
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.56 E-value=0.52 Score=40.54 Aligned_cols=36 Identities=31% Similarity=0.358 Sum_probs=30.6
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 185 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~ 185 (335)
..++|| .|++|.+|..++..+...|++|+++.++..
T Consensus 6 ~~~vlI----------tGasg~iG~~l~~~l~~~g~~v~~~~~~~~ 41 (249)
T PRK12825 6 GRVALV----------TGAARGLGRAIALRLARAGADVVVHYRSDE 41 (249)
T ss_pred CCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 458999 999999999999999999999887665543
No 378
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.54 E-value=0.46 Score=41.43 Aligned_cols=80 Identities=23% Similarity=0.249 Sum_probs=49.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHh-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADV-CINYKTED-FVARVKEET- 214 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~- 214 (335)
.+.+++| .|+++.+|.++++.+...|++|+++.++ ++..+.++..+... ..|-.+.. ..+.+.+..
T Consensus 6 ~~k~~lI----------tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 6 KGKVALI----------TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHH
Confidence 3578999 9999999999999999999999887654 33344444333322 12333322 222222211
Q ss_pred CCCcccEEEeCCCh
Q 019790 215 GGKGVDVILDCMGA 228 (335)
Q Consensus 215 ~~~~~d~vid~~g~ 228 (335)
...++|++|.|+|.
T Consensus 76 ~~~~id~li~~ag~ 89 (255)
T PRK06463 76 EFGRVDVLVNNAGI 89 (255)
T ss_pred HcCCCCEEEECCCc
Confidence 11368999998863
No 379
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.53 E-value=0.34 Score=41.88 Aligned_cols=77 Identities=30% Similarity=0.335 Sum_probs=47.4
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhH-HHH---HHcCCCEE---EeCCCcc-HH---
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL-AVC---KDLGADVC---INYKTED-FV--- 207 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~-~~~---~~~g~~~~---~~~~~~~-~~--- 207 (335)
+..+|| +|+++.+|..+++.+...|++|++..+ +..+. +.+ +..+.... .|..+.. ..
T Consensus 3 ~k~~lV----------tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (246)
T PRK12938 3 QRIAYV----------TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAF 72 (246)
T ss_pred CCEEEE----------ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 567899 999999999999999999999888653 22222 222 23344332 2322221 11
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 019790 208 ARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~ 228 (335)
+.+.+.. .++|+++.++|.
T Consensus 73 ~~~~~~~--~~id~li~~ag~ 91 (246)
T PRK12938 73 DKVKAEV--GEIDVLVNNAGI 91 (246)
T ss_pred HHHHHHh--CCCCEEEECCCC
Confidence 2222222 368999999874
No 380
>PRK07402 precorrin-6B methylase; Provisional
Probab=93.52 E-value=1.6 Score=36.54 Aligned_cols=100 Identities=19% Similarity=0.214 Sum_probs=58.5
Q ss_pred HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADV--CINYKTE 204 (335)
Q Consensus 132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~ 204 (335)
.....+.++++||- .| ++.|..++.+++.. +.+|++++.+++..+.+++ ++... ++..
T Consensus 33 ~~~l~~~~~~~VLD----------iG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~--- 97 (196)
T PRK07402 33 ISQLRLEPDSVLWD----------IG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG--- 97 (196)
T ss_pred HHhcCCCCCCEEEE----------eC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---
Confidence 35556778888776 55 34455556666554 5799999999888776653 44332 2222
Q ss_pred cHHHHHHHHhCCCcccE-EEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790 205 DFVARVKEETGGKGVDV-ILDCMGA--SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~-vid~~g~--~~~~~~~~~l~~~G~~v~~g 248 (335)
+..+.+... .. .+|. .++.... ..+..+.+.|+++|+++...
T Consensus 98 d~~~~~~~~-~~-~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 98 SAPECLAQL-AP-APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred chHHHHhhC-CC-CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 222222221 11 2344 4443222 33677888999999998764
No 381
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.51 E-value=0.4 Score=42.03 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=48.9
Q ss_pred CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecCh--hhHHHHH-HcCCC---EEEeCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCK-DLGAD---VCINYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~-~~g~~---~~~~~~~~~-~~~~ 209 (335)
.+.+++| +|+ ++++|.++++.+...|++|++++++. +..+.+. +++.. ...|-.+.. ..+.
T Consensus 6 ~~k~~lI----------tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~ 75 (256)
T PRK07889 6 EGKRILV----------TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASL 75 (256)
T ss_pred cCCEEEE----------eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHH
Confidence 4678999 998 79999999999888999999988653 3333332 33321 112333322 2222
Q ss_pred HHHHh-CCCcccEEEeCCCh
Q 019790 210 VKEET-GGKGVDVILDCMGA 228 (335)
Q Consensus 210 ~~~~~-~~~~~d~vid~~g~ 228 (335)
+.+.. ...++|++++++|.
T Consensus 76 ~~~~~~~~g~iD~li~nAG~ 95 (256)
T PRK07889 76 ADRVREHVDGLDGVVHSIGF 95 (256)
T ss_pred HHHHHHHcCCCcEEEEcccc
Confidence 22111 11369999998863
No 382
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.50 E-value=0.81 Score=41.82 Aligned_cols=87 Identities=20% Similarity=0.158 Sum_probs=60.1
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE------Ee---CCCccHHHHHHHHhCCCcccEEEeCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC------IN---YKTEDFVARVKEETGGKGVDVILDCM 226 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~------~~---~~~~~~~~~~~~~~~~~~~d~vid~~ 226 (335)
+| .|.+|.+.+..+...|.+|++..+++++.+.++..+.+.. +. ....+. .+.. +..|+||-|+
T Consensus 10 IG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~----~e~~--~~aD~Vi~~v 82 (328)
T PRK14618 10 LG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADP----EEAL--AGADFAVVAV 82 (328)
T ss_pred EC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCH----HHHH--cCCCEEEEEC
Confidence 77 8999999999988889999999998887777765421110 00 001122 2222 2589999999
Q ss_pred ChhhHHHhhccccCCCEEEEEec
Q 019790 227 GASYFQRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 227 g~~~~~~~~~~l~~~G~~v~~g~ 249 (335)
.+..+...++.++++-.++.+..
T Consensus 83 ~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 83 PSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred chHHHHHHHHhcCcCCEEEEEee
Confidence 99888778888887766666643
No 383
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.47 E-value=0.24 Score=41.65 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=55.8
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHH
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVK 211 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~ 211 (335)
...++.++|- .| .+.|..+..+++ .|++|++++.++...+.+++ .+..... ...+... .
T Consensus 27 ~~~~~~~vLD----------iG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~--~~~d~~~-~- 89 (195)
T TIGR00477 27 KTVAPCKTLD----------LG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRT--DAYDINA-A- 89 (195)
T ss_pred ccCCCCcEEE----------eC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCcee--Eeccchh-c-
Confidence 3444567777 66 456777777776 48899999999887776643 2322111 1111110 0
Q ss_pred HHhCCCcccEEEeCC-----Ch----hhHHHhhccccCCCEEEEEe
Q 019790 212 EETGGKGVDVILDCM-----GA----SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 212 ~~~~~~~~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g 248 (335)
. .. ..||+|+.+. .. ..+..+.+.|+++|.++.+.
T Consensus 90 ~-~~-~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 90 A-LN-EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred c-cc-CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 0 12 3699998642 21 23567788899999965553
No 384
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.47 E-value=0.84 Score=40.64 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=65.7
Q ss_pred CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
.|+.....+..|.. .++ -.|.+++| .|.+..+|.-+..++...|+.|++.-+.
T Consensus 139 ~PcTp~av~~ll~~-~~i~l~Gk~vvV----------iGrs~iVG~Pla~lL~~~~atVtv~hs~--------------- 192 (285)
T PRK10792 139 RPCTPRGIMTLLER-YGIDTYGLNAVV----------VGASNIVGRPMSLELLLAGCTVTVCHRF--------------- 192 (285)
T ss_pred CCCCHHHHHHHHHH-cCCCCCCCEEEE----------ECCCcccHHHHHHHHHHCCCeEEEEECC---------------
Confidence 45555555555533 333 36889999 9988889999999999999998887632
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 250 (335)
+.+ +.+.+ +.+|+++.++|...+-. -+.++++-.++.+|..
T Consensus 193 ----T~~----l~~~~--~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin 233 (285)
T PRK10792 193 ----TKN----LRHHV--RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN 233 (285)
T ss_pred ----CCC----HHHHH--hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence 112 23333 25899999999876422 2678888888888854
No 385
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=93.46 E-value=0.51 Score=40.59 Aligned_cols=93 Identities=23% Similarity=0.305 Sum_probs=60.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC--CCEEEeCCCccHHHHHHHHhC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVCINYKTEDFVARVKEETG 215 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~ 215 (335)
-+|-+||= .| .+.|+++.-+|+. |++|++++.+++..+.++... ...-+||..... .++..
T Consensus 58 l~g~~vLD----------vG--CGgG~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~----edl~~ 120 (243)
T COG2227 58 LPGLRVLD----------VG--CGGGILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVNIDYRQATV----EDLAS 120 (243)
T ss_pred CCCCeEEE----------ec--CCccHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhccccccchhhhH----HHHHh
Confidence 35556666 55 4457777777766 899999999999988887322 112244544322 22222
Q ss_pred -CCcccEEEe-----CCChhh--HHHhhccccCCCEEEEE
Q 019790 216 -GKGVDVILD-----CMGASY--FQRNLGSLNIDGRLFII 247 (335)
Q Consensus 216 -~~~~d~vid-----~~g~~~--~~~~~~~l~~~G~~v~~ 247 (335)
++.||+|+. .+.... +..+.+.++|+|.++.-
T Consensus 121 ~~~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 121 AGGQFDVVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred cCCCccEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 258999974 444432 46678899999988764
No 386
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.41 E-value=0.38 Score=42.25 Aligned_cols=92 Identities=24% Similarity=0.235 Sum_probs=59.1
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCC---EEEeCCCccHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD---VCINYKTEDFVARV 210 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~ 210 (335)
.++.+||- .| ++.|..+..+++. |.+|++++.+++..+.+++. +.. .++. .+.. .+
T Consensus 43 ~~~~~vLD----------iG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~-~l 105 (255)
T PRK11036 43 PRPLRVLD----------AG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQ-DI 105 (255)
T ss_pred CCCCEEEE----------eC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHH-HH
Confidence 44567777 66 5667788888875 89999999999988777642 221 1221 1111 12
Q ss_pred HHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEE
Q 019790 211 KEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~ 247 (335)
.... ...||+|+-... . ..+..+.+.|+|+|+++.+
T Consensus 106 ~~~~-~~~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 106 AQHL-ETPVDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hhhc-CCCCCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 2222 347999985432 1 2357788999999999765
No 387
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.38 E-value=0.94 Score=40.54 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=35.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
.+.+++| .| +|+.|.+++..+...|+ +|++++|+.++.+.+.
T Consensus 126 ~~k~vlI----------lG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQ----------LG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEE----------EC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4567888 77 79999999999999998 8999999988776664
No 388
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.31 E-value=0.78 Score=39.75 Aligned_cols=75 Identities=25% Similarity=0.360 Sum_probs=49.7
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCcc-HHH---H
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTED-FVA---R 209 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~-~~~---~ 209 (335)
.++|| .|++|.+|..++..+...|++|++++++.+..+.+.+ .+... . .|..+.. +.. .
T Consensus 2 ~~vlI----------tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (255)
T TIGR01963 2 KTALV----------TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAA 71 (255)
T ss_pred CEEEE----------cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 46899 9999999999999998899999999998876655533 22221 1 2333322 222 2
Q ss_pred HHHHhCCCcccEEEeCCC
Q 019790 210 VKEETGGKGVDVILDCMG 227 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g 227 (335)
+.+.. .+.|++|-+.+
T Consensus 72 ~~~~~--~~~d~vi~~a~ 87 (255)
T TIGR01963 72 AAAEF--GGLDILVNNAG 87 (255)
T ss_pred HHHhc--CCCCEEEECCC
Confidence 22222 35899998775
No 389
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.30 E-value=0.35 Score=43.24 Aligned_cols=75 Identities=20% Similarity=0.098 Sum_probs=49.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCE-EEeCCCccHHHHHHHHhC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETG 215 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~ 215 (335)
.+.+++| +| +|+.+.+++..+..+|+ +|+++.|+.++.+.+.+ ++... +.... ..+.+....
T Consensus 124 ~~k~vlv----------lG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~~- 188 (282)
T TIGR01809 124 AGFRGLV----------IG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAIE- 188 (282)
T ss_pred CCceEEE----------Ec-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhcc-
Confidence 4678888 87 79999999999999998 79999999887776643 32211 11100 001111211
Q ss_pred CCcccEEEeCCChh
Q 019790 216 GKGVDVILDCMGAS 229 (335)
Q Consensus 216 ~~~~d~vid~~g~~ 229 (335)
..+|+||+|++..
T Consensus 189 -~~~DiVInaTp~g 201 (282)
T TIGR01809 189 -KAAEVLVSTVPAD 201 (282)
T ss_pred -cCCCEEEECCCCC
Confidence 3589999998753
No 390
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.27 E-value=0.54 Score=42.65 Aligned_cols=78 Identities=19% Similarity=0.296 Sum_probs=50.4
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCcc-HHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTED-FVARV 210 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~-~~~~~ 210 (335)
+.++|| .|+++++|.+++..+...| ++|+++++++++.+.+. ++. .. .. .|-.+.. ....+
T Consensus 3 ~k~vlI----------TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 72 (314)
T TIGR01289 3 KPTVII----------TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV 72 (314)
T ss_pred CCEEEE----------ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence 457899 9999999999998888889 89999999887665443 332 11 11 2333322 22222
Q ss_pred HHHh-CCCcccEEEeCCC
Q 019790 211 KEET-GGKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~-~~~~~d~vid~~g 227 (335)
.+.. ...++|++|.++|
T Consensus 73 ~~~~~~~~~iD~lI~nAG 90 (314)
T TIGR01289 73 QQFRESGRPLDALVCNAA 90 (314)
T ss_pred HHHHHhCCCCCEEEECCC
Confidence 2211 1236899999876
No 391
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.27 E-value=0.67 Score=41.17 Aligned_cols=69 Identities=16% Similarity=0.283 Sum_probs=48.3
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHH
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEE 213 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 213 (335)
+...+.+++| .| +|+.+.+++..+..+|+ +|+++.|+.++.+.+.+ ++.. +...+
T Consensus 118 ~~~~~~~vli----------lG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---------~~~~~--- 174 (272)
T PRK12550 118 QVPPDLVVAL----------RG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---------WRPDL--- 174 (272)
T ss_pred CCCCCCeEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---------chhhc---
Confidence 3344567888 77 79999999999999998 69999999987776653 3211 10111
Q ss_pred hCCCcccEEEeCCCh
Q 019790 214 TGGKGVDVILDCMGA 228 (335)
Q Consensus 214 ~~~~~~d~vid~~g~ 228 (335)
....+|+|++|++.
T Consensus 175 -~~~~~dlvINaTp~ 188 (272)
T PRK12550 175 -GGIEADILVNVTPI 188 (272)
T ss_pred -ccccCCEEEECCcc
Confidence 11358999999863
No 392
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.25 E-value=0.12 Score=41.22 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=55.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeC------CCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY------KTEDFVARVKEETGGKGVDVILDCMGAS 229 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~d~vid~~g~~ 229 (335)
.| .|++|...+..++..|.+|..+.+++ +.+.+++.|....... ........ ......+|++|-|+-+.
T Consensus 4 ~G-~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 4 IG-AGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAVKAY 78 (151)
T ss_dssp ES-TSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-SSGG
T ss_pred EC-cCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEeccc
Confidence 66 79999999999988999999999888 7777776553221111 00000000 01124799999999775
Q ss_pred hHHH----hhccccCCCEEEEEec
Q 019790 230 YFQR----NLGSLNIDGRLFIIGT 249 (335)
Q Consensus 230 ~~~~----~~~~l~~~G~~v~~g~ 249 (335)
.... +...+.++..++.+.+
T Consensus 79 ~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 79 QLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp GHHHHHHHHCTGEETTEEEEEESS
T ss_pred chHHHHHHHhhccCCCcEEEEEeC
Confidence 5443 4445555667776643
No 393
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=93.15 E-value=3.4 Score=34.84 Aligned_cols=80 Identities=19% Similarity=0.264 Sum_probs=54.4
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG 216 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 216 (335)
-.|.+++| .| .|.+|..+++.+...|++|+++++++++.+.+.+ +++. .++.. .+. .
T Consensus 26 l~gk~v~I----------~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~------~l~----~ 83 (200)
T cd01075 26 LEGKTVAV----------QG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE------EIY----S 83 (200)
T ss_pred CCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch------hhc----c
Confidence 35678888 87 7999999999999999999999988887776654 4543 23221 111 1
Q ss_pred CcccEEEeCCChhh-HHHhhcccc
Q 019790 217 KGVDVILDCMGASY-FQRNLGSLN 239 (335)
Q Consensus 217 ~~~d~vid~~g~~~-~~~~~~~l~ 239 (335)
..+|+++-|..... ....++.|+
T Consensus 84 ~~~Dv~vp~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 84 VDADVFAPCALGGVINDDTIPQLK 107 (200)
T ss_pred ccCCEEEecccccccCHHHHHHcC
Confidence 25899997655433 344455554
No 394
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.13 E-value=0.65 Score=40.65 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=31.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
.+.++|| .|+++.+|..+++.+...|++|+++.++.
T Consensus 6 ~~k~~lI----------tGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 6 EGKVVVI----------TGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678999 99999999999999999999998887743
No 395
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.13 E-value=0.4 Score=42.05 Aligned_cols=77 Identities=17% Similarity=0.224 Sum_probs=46.7
Q ss_pred CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecC------hhhHHHHHHcCCC-EE--EeCCCcc-H
Q 019790 139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGS------EEKLAVCKDLGAD-VC--INYKTED-F 206 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~------~~~~~~~~~~g~~-~~--~~~~~~~-~ 206 (335)
.+..++| +|++ +++|.+++..+...|++|+++.++ ++..+.+.+.+.. .. .|-.+.. .
T Consensus 5 ~~k~~lI----------tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v 74 (258)
T PRK07370 5 TGKKALV----------TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQI 74 (258)
T ss_pred CCcEEEE----------eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHH
Confidence 4678899 9975 799999999999999999887543 2223333322211 12 2333322 1
Q ss_pred ---HHHHHHHhCCCcccEEEeCCC
Q 019790 207 ---VARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 207 ---~~~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.+.. .++|++++|+|
T Consensus 75 ~~~~~~~~~~~--g~iD~lv~nag 96 (258)
T PRK07370 75 EETFETIKQKW--GKLDILVHCLA 96 (258)
T ss_pred HHHHHHHHHHc--CCCCEEEEccc
Confidence 22222222 36999999887
No 396
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=93.12 E-value=0.39 Score=46.24 Aligned_cols=77 Identities=16% Similarity=0.228 Sum_probs=53.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh---------------------hhHHHHHHcCCCE
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------------------EKLAVCKDLGADV 197 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~---------------------~~~~~~~~~g~~~ 197 (335)
.+.+|+| .| .|+.|+.++..++..|.+|++..+.+ ...+.++++|.+.
T Consensus 140 ~~~~V~I----------IG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~ 208 (467)
T TIGR01318 140 TGKRVAV----------IG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEF 208 (467)
T ss_pred CCCeEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEE
Confidence 5678998 88 69999999999999999999987653 2456667788766
Q ss_pred EEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790 198 CINYKTEDFVARVKEETGGKGVDVILDCMGAS 229 (335)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 229 (335)
.++...... -.+.+.. ..||.||.++|..
T Consensus 209 ~~~~~v~~~-~~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 209 HLNCEVGRD-ISLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred ECCCEeCCc-cCHHHHH--hcCCEEEEEeCCC
Confidence 554422110 0111222 2599999999974
No 397
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.11 E-value=0.56 Score=40.73 Aligned_cols=73 Identities=22% Similarity=0.330 Sum_probs=45.7
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCcc-HHHHHHHHh-CCCcccEEEeCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTED-FVARVKEET-GGKGVDVILDCM 226 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~-~~~~~~~~~-~~~~~d~vid~~ 226 (335)
.|++|.+|..+++.+...|++|+++.+++++.+.+ +..+... . .|-.+.. ..+.+.+.. ...++|++|.++
T Consensus 6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~a 85 (254)
T TIGR02415 6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNA 85 (254)
T ss_pred eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 99999999999999999999999999887655433 2233221 1 2333322 222222211 112589999988
Q ss_pred Ch
Q 019790 227 GA 228 (335)
Q Consensus 227 g~ 228 (335)
|.
T Consensus 86 g~ 87 (254)
T TIGR02415 86 GV 87 (254)
T ss_pred Cc
Confidence 63
No 398
>PRK08317 hypothetical protein; Provisional
Probab=93.07 E-value=1.1 Score=38.27 Aligned_cols=98 Identities=19% Similarity=0.220 Sum_probs=64.3
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHc----CCCE-EEeCCCcc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL----GADV-CINYKTED 205 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~ 205 (335)
+...+.++.+||. .| +|. |..+..+++.. +.++++++.++...+.+++. .... ....+...
T Consensus 13 ~~~~~~~~~~vLd----------iG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 80 (241)
T PRK08317 13 ELLAVQPGDRVLD----------VG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG 80 (241)
T ss_pred HHcCCCCCCEEEE----------eC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc
Confidence 5567788899988 77 444 88888998887 36899999998888777654 1111 11111111
Q ss_pred HHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790 206 FVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g 248 (335)
+ . .....||+|+-... . ..+..+.+.|+++|.++...
T Consensus 81 ~-----~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 81 L-----P-FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred C-----C-CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 0 0 11246899885322 2 23577889999999998765
No 399
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=93.04 E-value=0.29 Score=44.82 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=32.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
++.++|| +||+|.+|..+++.+...|++|+++.++.
T Consensus 5 ~~~~vlV----------TGatGfiG~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALI----------TGITGQDGSYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred CCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence 3578999 99999999999999999999999998754
No 400
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=93.04 E-value=1.7 Score=38.88 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=72.6
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--C-C-CEEEeCCC----ccHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--G-A-DVCINYKT----EDFVA 208 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--g-~-~~~~~~~~----~~~~~ 208 (335)
..+.-|+| +|..++.|..++.-+..+|.+|++.+.+++..+.++. . + . ...+|-.. ....+
T Consensus 27 ~~~k~VlI----------TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~ 96 (322)
T KOG1610|consen 27 LSDKAVLI----------TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQ 96 (322)
T ss_pred cCCcEEEE----------ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHH
Confidence 34556999 9999999999999999999999999987776665542 1 1 1 12233333 22355
Q ss_pred HHHHHhCCCcccEEEeCCChh---------------------------hHHHhhccccC-CCEEEEEeccCC
Q 019790 209 RVKEETGGKGVDVILDCMGAS---------------------------YFQRNLGSLNI-DGRLFIIGTQGG 252 (335)
Q Consensus 209 ~~~~~~~~~~~d~vid~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~ 252 (335)
.++++++..+.--+++++|-. .....+..+++ .||++.+++..+
T Consensus 97 ~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 97 WVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred HHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 677778888899999999811 11234455544 699998877665
No 401
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=93.01 E-value=2.8 Score=35.48 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=57.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
.|.+||| .| .|.+|..-++.+...|++|+++..... ....+.+.+. ..+-..... ... . .
T Consensus 8 ~gk~vlV----------vG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~~-~~d----l--~ 68 (205)
T TIGR01470 8 EGRAVLV----------VG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGG-ITWLARCFD-ADI----L--E 68 (205)
T ss_pred CCCeEEE----------EC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCC-EEEEeCCCC-HHH----h--C
Confidence 3567888 87 599999999999999999999986432 3333333332 222111111 111 1 3
Q ss_pred cccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790 218 GVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 218 ~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g 248 (335)
++++||-+++... ........+..|.++...
T Consensus 69 ~~~lVi~at~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 69 GAFLVIAATDDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 6899999999874 444555555667666543
No 402
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=92.95 E-value=0.26 Score=42.22 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=47.3
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE-EEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+||+|-+|..++..+...|.+|+.+.++......... ..... ..|..+......+.+ ...+|.||.+++.
T Consensus 4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~---~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLE---KANIDVVIHLAAF 75 (236)
T ss_dssp ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHH---HHTESEEEEEBSS
T ss_pred EccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccc---ccCceEEEEeecc
Confidence 9999999999999999999999988877665554432 22222 234444333333322 2368999998874
No 403
>PRK00811 spermidine synthase; Provisional
Probab=92.94 E-value=0.73 Score=41.21 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=59.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCC--------CEEEeCCCccHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA--------DVCINYKTEDFVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~ 209 (335)
+.++||+ .| ++.|..+..+++..+. +|++++.+++..+.+++.-. +.-+.....+..+.
T Consensus 76 ~p~~VL~----------iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~ 143 (283)
T PRK00811 76 NPKRVLI----------IG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKF 143 (283)
T ss_pred CCCEEEE----------Ee--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHH
Confidence 4568999 87 4457778888887664 89999999988887765211 10011111222233
Q ss_pred HHHHhCCCcccEEEeCCCh-----------hhHHHhhccccCCCEEEEE
Q 019790 210 VKEETGGKGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 210 ~~~~~~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 247 (335)
+.+ ..+.||+|+--... +.+..+.+.|+++|.++..
T Consensus 144 l~~--~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 144 VAE--TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred Hhh--CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 332 23479999863311 1235678899999998865
No 404
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=92.93 E-value=0.18 Score=44.02 Aligned_cols=104 Identities=18% Similarity=0.334 Sum_probs=63.5
Q ss_pred HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHH----HcCCC--EEEeCC
Q 019790 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGAD--VCINYK 202 (335)
Q Consensus 131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~----~~g~~--~~~~~~ 202 (335)
+....++.||++|+- -| .+.|.+...+++..| -+|+.....+++.+.++ ..|.. ..+...
T Consensus 32 I~~~l~i~pG~~VlE----------aG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~ 99 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLE----------AG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR 99 (247)
T ss_dssp HHHHTT--TT-EEEE----------E----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES
T ss_pred HHHHcCCCCCCEEEE----------ec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec
Confidence 445689999999999 54 455777777787776 38999999998887765 34432 222222
Q ss_pred CccHH-HHHHHHhCCCcccEEEeCCCh--hhHHHhhccc-cCCCEEEEEec
Q 019790 203 TEDFV-ARVKEETGGKGVDVILDCMGA--SYFQRNLGSL-NIDGRLFIIGT 249 (335)
Q Consensus 203 ~~~~~-~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l-~~~G~~v~~g~ 249 (335)
+ +. +-..+.. ...+|.||-=... ..+..+.+.| +++|+++.+..
T Consensus 100 D--v~~~g~~~~~-~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 100 D--VCEEGFDEEL-ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp ---GGCG--STT--TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred c--eecccccccc-cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 2 11 0111111 2368888754444 4678899999 89999998853
No 405
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=92.93 E-value=1.2 Score=39.03 Aligned_cols=96 Identities=17% Similarity=0.115 Sum_probs=63.5
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARV 210 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 210 (335)
....+.++++||- +| ++.|..+..+++.. +.+|++++.++...+.+++.... .....+.
T Consensus 25 ~~~~~~~~~~vLD----------iG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~------- 85 (258)
T PRK01683 25 ARVPLENPRYVVD----------LG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADI------- 85 (258)
T ss_pred hhCCCcCCCEEEE----------Ec--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECch-------
Confidence 4445677888887 76 44677777888776 57999999999888887754322 2222211
Q ss_pred HHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEE
Q 019790 211 KEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~ 247 (335)
.++.....||+|+-...- ..+..+.+.|+++|.++..
T Consensus 86 ~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 86 ASWQPPQALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred hccCCCCCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 112223479999865431 2357788999999998775
No 406
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=92.93 E-value=0.49 Score=42.95 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=34.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 188 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~ 188 (335)
.|.+||| +|++|-+|..++..+...|++|+++.++....+
T Consensus 4 ~~~~vlV----------TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCV----------TGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 4678999 999999999999988888999999988765433
No 407
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=92.89 E-value=0.7 Score=40.48 Aligned_cols=39 Identities=26% Similarity=0.430 Sum_probs=32.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL 187 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~ 187 (335)
++.++|| .|+++++|.+++..+...|++|+++.+ ++++.
T Consensus 7 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~ 46 (260)
T PRK08416 7 KGKTLVI----------SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEA 46 (260)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 4678999 999999999999999999999988764 44433
No 408
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=92.89 E-value=0.62 Score=40.07 Aligned_cols=68 Identities=18% Similarity=0.206 Sum_probs=50.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChh--hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g 227 (335)
.|++|.+|...++.+...+.+|.+.+|+.. ..+.+++.|+..+ .- +.+-.+.+.+... ++|.||-+++
T Consensus 4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~-d~~~~~~l~~al~--g~d~v~~~~~ 73 (233)
T PF05368_consen 4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EA-DYDDPESLVAALK--GVDAVFSVTP 73 (233)
T ss_dssp ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES--TT-HHHHHHHHT--TCSEEEEESS
T ss_pred ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ec-ccCCHHHHHHHHc--CCceEEeecC
Confidence 999999999999999999999999999764 3556677888544 22 2222345555554 6999999888
No 409
>PRK07041 short chain dehydrogenase; Provisional
Probab=92.88 E-value=0.88 Score=38.85 Aligned_cols=71 Identities=28% Similarity=0.333 Sum_probs=46.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc--CCC-EEE--eCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCI--NYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~--g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+|+++.+|..++..+...|++|++++++.++.+... .+ +.. ..+ |..+......+.+.. +++|.+|.++|.
T Consensus 3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag~ 79 (230)
T PRK07041 3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAAD 79 (230)
T ss_pred ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCCC
Confidence 899999999999999899999999999876655443 22 221 122 333322222233332 368999998873
No 410
>PRK12746 short chain dehydrogenase; Provisional
Probab=92.82 E-value=0.76 Score=39.91 Aligned_cols=39 Identities=26% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLA 188 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~ 188 (335)
+.+++| +|++|.+|..+++.+...|++|++. .++.++.+
T Consensus 6 ~~~ilI----------tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~ 45 (254)
T PRK12746 6 GKVALV----------TGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD 45 (254)
T ss_pred CCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 568999 9999999999999998889998775 56665543
No 411
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=92.80 E-value=0.96 Score=41.66 Aligned_cols=77 Identities=17% Similarity=0.224 Sum_probs=50.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc--CCC-EEEeCCCccHHHHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCINYKTEDFVARVKEE 213 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~~~~~~~~~ 213 (335)
..+.+||| +||+|-+|..+++.+...|++|+++.++.+..+.+. .+ +.. ..+..+-.+ .+.+.+.
T Consensus 8 ~~~~~vLV----------tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~ 76 (353)
T PLN02896 8 SATGTYCV----------TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEA 76 (353)
T ss_pred cCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHH
Confidence 45678999 999999999999999999999999988766544332 21 111 122221111 1233343
Q ss_pred hCCCcccEEEeCCC
Q 019790 214 TGGKGVDVILDCMG 227 (335)
Q Consensus 214 ~~~~~~d~vid~~g 227 (335)
.. ++|.||.+++
T Consensus 77 ~~--~~d~Vih~A~ 88 (353)
T PLN02896 77 VK--GCDGVFHVAA 88 (353)
T ss_pred Hc--CCCEEEECCc
Confidence 32 4899998775
No 412
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=92.78 E-value=2.8 Score=36.22 Aligned_cols=95 Identities=14% Similarity=0.197 Sum_probs=53.9
Q ss_pred ccccchHHHHHHHHHhhCCC-eEEEEecC------hhh--HHH---------------HHHcCCCEEEeCCCccH-HHHH
Q 019790 156 HGGSSGIGTFAIQMGKCQGV-RVFVTAGS------EEK--LAV---------------CKDLGADVCINYKTEDF-VARV 210 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~-~V~~~~~~------~~~--~~~---------------~~~~g~~~~~~~~~~~~-~~~~ 210 (335)
.| .|++|..++..+-+.|. +++.++.. -.+ +.. .++.....-+...+..+ .+.+
T Consensus 36 vG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t~en~ 114 (263)
T COG1179 36 VG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFITEENL 114 (263)
T ss_pred Ee-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhCHhHH
Confidence 66 89999999999999998 67665531 111 111 12222221122222222 3444
Q ss_pred HHHhCCCcccEEEeCCChhhH--HHhhccccCCCEEEEEeccCC
Q 019790 211 KEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~~ 252 (335)
.++... +||+|+||+.+-.. ..+.-|.+.+=.++..++.++
T Consensus 115 ~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 115 EDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred HHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 555554 89999999987443 333345555556676655544
No 413
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=92.76 E-value=1.2 Score=39.24 Aligned_cols=100 Identities=22% Similarity=0.152 Sum_probs=63.4
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHHcC-------C-C-EEEeC
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDLG-------A-D-VCINY 201 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~g-------~-~-~~~~~ 201 (335)
....+.++++||- .| .+.|..+..+++..+ .+|++++.+++..+.+++.. . . ..+..
T Consensus 67 ~~~~~~~~~~VLD----------lG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~ 134 (261)
T PLN02233 67 SWSGAKMGDRVLD----------LC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG 134 (261)
T ss_pred HHhCCCCCCEEEE----------EC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc
Confidence 3456778888887 66 444667777777765 58999999999888775421 1 1 11111
Q ss_pred CCccHHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEecc
Q 019790 202 KTEDFVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 250 (335)
+...+ -.....||.|+-+.+ . ..+.++.+.|+|+|+++.....
T Consensus 135 d~~~l------p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 135 DATDL------PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred ccccC------CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 11111 012346999976432 1 2367889999999999877543
No 414
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=92.75 E-value=1.4 Score=35.79 Aligned_cols=82 Identities=22% Similarity=0.239 Sum_probs=53.0
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHH-
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQR- 233 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~- 233 (335)
+| .|.+|...+.-+...|.+|++.++++++.+.+.+.|+... + +..+.+ + ..|+||-|+.+.. ...
T Consensus 7 IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~----s~~e~~-~-----~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 7 IG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-D----SPAEAA-E-----QADVVILCVPDDDAVEAV 74 (163)
T ss_dssp E---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-S----SHHHHH-H-----HBSEEEE-SSSHHHHHHH
T ss_pred Ec-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-h----hhhhHh-h-----cccceEeecccchhhhhh
Confidence 66 8999999999988899999999999999998888774322 1 112222 1 3699999988733 333
Q ss_pred -----hhccccCCCEEEEEec
Q 019790 234 -----NLGSLNIDGRLFIIGT 249 (335)
Q Consensus 234 -----~~~~l~~~G~~v~~g~ 249 (335)
.+..+.++..++.++.
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhHHhhccccceEEEecCC
Confidence 3444555555666543
No 415
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=92.64 E-value=0.39 Score=41.33 Aligned_cols=98 Identities=14% Similarity=0.177 Sum_probs=62.0
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADV--CINYKTE 204 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~ 204 (335)
....++++++||- .| ++.|..+..+++.. +.+|+.++.+++..+.+++ .+.+. ++..+..
T Consensus 39 ~~l~~~~~~~vLD----------iG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 106 (231)
T TIGR02752 39 KRMNVQAGTSALD----------VC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAM 106 (231)
T ss_pred HhcCCCCCCEEEE----------eC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechh
Confidence 4456778888888 66 55677777888775 3599999999888776653 22221 1211111
Q ss_pred cHHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790 205 DFVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g 248 (335)
.+ ......||+|+-+.. . ..+..+.+.|+++|+++.+.
T Consensus 107 ~~------~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 151 (231)
T TIGR02752 107 EL------PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLE 151 (231)
T ss_pred cC------CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEE
Confidence 10 012347999975432 1 23566788999999998764
No 416
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=92.64 E-value=1.4 Score=39.44 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=29.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecCh
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE 184 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~ 184 (335)
.+.+++| +|+ |++|.+++..+...|++ |+++.|+.
T Consensus 125 ~~k~vlI----------~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTV----------IGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEE----------ECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4678899 885 89999999888888995 99999985
No 417
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.57 E-value=1.4 Score=39.33 Aligned_cols=94 Identities=18% Similarity=0.178 Sum_probs=65.0
Q ss_pred CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
.|+.....+..|.. -++ -.|.+++| .|.+..+|.-+..++...|+.|++....
T Consensus 144 ~PcTp~av~~ll~~-~~i~l~Gk~vvV----------iGrs~iVGkPla~lL~~~~atVtv~hs~--------------- 197 (287)
T PRK14176 144 VPCTPHGVIRALEE-YGVDIEGKNAVI----------VGHSNVVGKPMAAMLLNRNATVSVCHVF--------------- 197 (287)
T ss_pred CCCcHHHHHHHHHH-cCCCCCCCEEEE----------ECCCcccHHHHHHHHHHCCCEEEEEecc---------------
Confidence 45544445555533 333 47889999 9988889999999999999998777621
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 250 (335)
+.+ +.+.+ +.+|+++.++|...+- --+.++++-.++.+|..
T Consensus 198 ----T~~----l~~~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 198 ----TDD----LKKYT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred ----CCC----HHHHH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 111 22222 2589999999987643 24578888888888864
No 418
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=92.57 E-value=1.3 Score=39.66 Aligned_cols=59 Identities=22% Similarity=0.364 Sum_probs=47.6
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEEeCC
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYK 202 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~~~ 202 (335)
....++||.+|+- ..+|..|++++.+++.+|++++++.. +.++++.++.+|+..++...
T Consensus 55 ~~G~l~pG~tIVE-----------~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVE-----------ATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEE-----------cCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4567899997766 45789999999999999999888764 77888889999998776554
No 419
>PLN02214 cinnamoyl-CoA reductase
Probab=92.56 E-value=0.91 Score=41.70 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=48.8
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH--HHHHcC---CCE-EEeCCCccHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLG---ADV-CINYKTEDFVARVKE 212 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~--~~~~~g---~~~-~~~~~~~~~~~~~~~ 212 (335)
++.++|| +|++|-+|..++..+...|.+|++++++.+... .+..+. ... .+..+-.+ ...+.+
T Consensus 9 ~~~~vlV----------TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~ 77 (342)
T PLN02214 9 AGKTVCV----------TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKA 77 (342)
T ss_pred CCCEEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHH
Confidence 4678999 999999999999999999999999998765321 122221 111 12111111 223333
Q ss_pred HhCCCcccEEEeCCCh
Q 019790 213 ETGGKGVDVILDCMGA 228 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~ 228 (335)
... ++|+||.+++.
T Consensus 78 ~~~--~~d~Vih~A~~ 91 (342)
T PLN02214 78 AID--GCDGVFHTASP 91 (342)
T ss_pred HHh--cCCEEEEecCC
Confidence 332 58999998863
No 420
>PRK12827 short chain dehydrogenase; Provisional
Probab=92.54 E-value=0.91 Score=39.14 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=29.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~ 182 (335)
.+.++|| .|++|.+|..++..+...|++|+++.+
T Consensus 5 ~~~~ilI----------tGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLI----------TGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 3568999 999999999999988889999988654
No 421
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=92.52 E-value=0.37 Score=42.79 Aligned_cols=56 Identities=13% Similarity=0.155 Sum_probs=39.5
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
.||+|-+|..+++.+...|.+|+++.++. .|..+ .+.+.+...+..+|+|+++++.
T Consensus 5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~~--------------~d~~~---~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 5 TGANGQLGRELVQQLSPEGRVVVALTSSQ--------------LDLTD---PEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred EcCCCHHHHHHHHHHHhcCCEEEEeCCcc--------------cCCCC---HHHHHHHHHhCCCCEEEECCcc
Confidence 99999999999999999999999998751 12222 1233333333457888888763
No 422
>PRK08655 prephenate dehydrogenase; Provisional
Probab=92.48 E-value=0.67 Score=44.20 Aligned_cols=83 Identities=22% Similarity=0.339 Sum_probs=50.9
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHH--
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ-- 232 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-- 232 (335)
+||.|.+|.+.+..++..|.+|++.++++++. +.+.++|... . .+..+. . ...|+||-|+......
T Consensus 6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-~----~~~~e~----~--~~aDvVIlavp~~~~~~v 74 (437)
T PRK08655 6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-A----NDNIDA----A--KDADIVIISVPINVTEDV 74 (437)
T ss_pred EecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-c----cCHHHH----h--ccCCEEEEecCHHHHHHH
Confidence 88789999999999999999999999887764 4445566421 1 111111 1 2357777777654332
Q ss_pred --HhhccccCCCEEEEEec
Q 019790 233 --RNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 233 --~~~~~l~~~G~~v~~g~ 249 (335)
.....++++..++.++.
T Consensus 75 l~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 75 IKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHhhCCCCCEEEEccc
Confidence 22333444555555543
No 423
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=92.46 E-value=1.3 Score=35.11 Aligned_cols=96 Identities=15% Similarity=0.058 Sum_probs=65.4
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
.++........+....---.|.+++| +|.+..+|.-++.++...|++|+...+...
T Consensus 8 ~p~t~~a~~~ll~~~~~~~~gk~v~V----------vGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------- 63 (140)
T cd05212 8 VSPVAKAVKELLNKEGVRLDGKKVLV----------VGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------- 63 (140)
T ss_pred cccHHHHHHHHHHHcCCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEeCCCCc--------------
Confidence 44444444444533322347889999 999999999999999999999988874321
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
+..+.+ +..|+|+-++|...+ ---++++++-.++.+|...
T Consensus 64 -----~l~~~v------~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 64 -----QLQSKV------HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred -----CHHHHH------hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 111111 258999999998753 2246788888888776543
No 424
>PRK12744 short chain dehydrogenase; Provisional
Probab=92.42 E-value=0.88 Score=39.69 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=29.3
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~ 182 (335)
.+.++|| .|+++.+|.+++..+...|++|+++++
T Consensus 7 ~~k~vlI----------tGa~~gIG~~~a~~l~~~G~~vv~i~~ 40 (257)
T PRK12744 7 KGKVVLI----------AGGAKNLGGLIARDLAAQGAKAVAIHY 40 (257)
T ss_pred CCcEEEE----------ECCCchHHHHHHHHHHHCCCcEEEEec
Confidence 3568999 999999999999999989999777654
No 425
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=92.41 E-value=1.8 Score=38.68 Aligned_cols=42 Identities=17% Similarity=0.190 Sum_probs=34.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~ 191 (335)
.+.+++| .| +|+.+.+++..+..+|+ +++++.|+.++.+.+.
T Consensus 126 ~~k~vli----------lG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQ----------VG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4677888 87 79999999988888997 7999999988776664
No 426
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=92.41 E-value=1.1 Score=38.64 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=54.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH--cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 233 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 233 (335)
.| .|.+|...++.+...|.+|+++.+++++.+...+ ... +++..+..+ ....+..+-..+|+++-++|.+..+.
T Consensus 6 iG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~--~~~L~~agi~~aD~vva~t~~d~~N~ 81 (225)
T COG0569 6 IG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD--EDVLEEAGIDDADAVVAATGNDEVNS 81 (225)
T ss_pred EC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC--HHHHHhcCCCcCCEEEEeeCCCHHHH
Confidence 56 8999999999999999999999999998877433 444 333333322 23344445567999999999866544
Q ss_pred h
Q 019790 234 N 234 (335)
Q Consensus 234 ~ 234 (335)
.
T Consensus 82 i 82 (225)
T COG0569 82 V 82 (225)
T ss_pred H
Confidence 3
No 427
>PRK09135 pteridine reductase; Provisional
Probab=92.41 E-value=0.92 Score=39.08 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=31.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~ 183 (335)
.+.++|| +|++|.+|..++..+...|++|++++++
T Consensus 5 ~~~~vlI----------tGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALI----------TGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 3568999 9999999999999998899999999975
No 428
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=92.37 E-value=0.31 Score=37.90 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=49.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 233 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 233 (335)
+| +|.+|..+...++..|.+|..+. ++.+..+.+.. ++...+.+.. +.. ...|++|-++..+.+..
T Consensus 16 IG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~---------~~~--~~aDlv~iavpDdaI~~ 83 (127)
T PF10727_consen 16 IG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLE---------EIL--RDADLVFIAVPDDAIAE 83 (127)
T ss_dssp EC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TT---------GGG--CC-SEEEE-S-CCHHHH
T ss_pred EC-CCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccc---------ccc--ccCCEEEEEechHHHHH
Confidence 77 79999999999999999988874 55555566554 3433333221 111 36899999999988877
Q ss_pred hhccccCC-----CEEEEE
Q 019790 234 NLGSLNID-----GRLFII 247 (335)
Q Consensus 234 ~~~~l~~~-----G~~v~~ 247 (335)
..+.|... |+++.-
T Consensus 84 va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 84 VAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHhccCCCCcEEEE
Confidence 77766544 666544
No 429
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=92.36 E-value=1.5 Score=41.17 Aligned_cols=94 Identities=20% Similarity=0.288 Sum_probs=62.9
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH-HHcCCCEEEeCCCccHHHHHHHHhC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETG 215 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 215 (335)
-.+.++|+ +| +|-+|..++..+...|. +|++..|+.++...+ +++++..+ . .+.+.+.+.
T Consensus 176 L~~~~vlv----------IG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~------l~el~~~l~ 237 (414)
T COG0373 176 LKDKKVLV----------IG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A------LEELLEALA 237 (414)
T ss_pred cccCeEEE----------Ec-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c------HHHHHHhhh
Confidence 35667888 77 79999999999999996 899999999887655 46884432 1 123333333
Q ss_pred CCcccEEEeCCChhh--H--HHhhccccCCCE--EEEEeccC
Q 019790 216 GKGVDVILDCMGASY--F--QRNLGSLNIDGR--LFIIGTQG 251 (335)
Q Consensus 216 ~~~~d~vid~~g~~~--~--~~~~~~l~~~G~--~v~~g~~~ 251 (335)
.+|+||-++|+.. + ......++..-+ ++.++.+.
T Consensus 238 --~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 238 --EADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred --hCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 5899999998864 1 233444444333 45666554
No 430
>PRK05599 hypothetical protein; Provisional
Probab=92.34 E-value=0.64 Score=40.43 Aligned_cols=70 Identities=20% Similarity=0.221 Sum_probs=45.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC--EEE--eCCCcc-H---HHHHHHHhCCCcccEEE
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCI--NYKTED-F---VARVKEETGGKGVDVIL 223 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~--~~~--~~~~~~-~---~~~~~~~~~~~~~d~vi 223 (335)
.|+++++|.+.+..+. .|++|+++.+++++.+.+. +.+.. ..+ |-.+.+ . .+.+.+.. +++|+++
T Consensus 6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~id~lv 82 (246)
T PRK05599 6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA--GEISLAV 82 (246)
T ss_pred EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc--CCCCEEE
Confidence 9999999999988776 4999999999887765542 23322 122 333322 2 22333322 3689999
Q ss_pred eCCCh
Q 019790 224 DCMGA 228 (335)
Q Consensus 224 d~~g~ 228 (335)
.+.|.
T Consensus 83 ~nag~ 87 (246)
T PRK05599 83 VAFGI 87 (246)
T ss_pred EecCc
Confidence 88874
No 431
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=92.33 E-value=0.48 Score=47.59 Aligned_cols=77 Identities=19% Similarity=0.196 Sum_probs=54.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh---------------------hHHHHHHcCCCE
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---------------------KLAVCKDLGADV 197 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~ 197 (335)
.+.+|+| +| .|+.|+.++..++..|.+|++..+.+. +.+.++++|.+.
T Consensus 309 ~~kkVaI----------IG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~ 377 (639)
T PRK12809 309 RSEKVAV----------IG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDF 377 (639)
T ss_pred CCCEEEE----------EC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEE
Confidence 4788999 88 699999999999999999999986652 456667788776
Q ss_pred EEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790 198 CINYKTEDFVARVKEETGGKGVDVILDCMGAS 229 (335)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 229 (335)
.++...... -.+.+.. ..||.||.++|..
T Consensus 378 ~~~~~v~~~-~~~~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 378 HLNCEIGRD-ITFSDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred EcCCccCCc-CCHHHHH--hcCCEEEEeCCCC
Confidence 665432110 0112222 3699999999874
No 432
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.30 E-value=0.56 Score=40.54 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=30.9
Q ss_pred EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 186 (335)
Q Consensus 142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~ 186 (335)
++|| .|++|.+|..+++.+...|++|++++++.+.
T Consensus 3 ~vlI----------tGasggiG~~ia~~l~~~G~~v~~~~r~~~~ 37 (243)
T PRK07023 3 RAIV----------TGHSRGLGAALAEQLLQPGIAVLGVARSRHP 37 (243)
T ss_pred eEEE----------ecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence 5888 9999999999999998889999999987553
No 433
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.27 E-value=1 Score=39.03 Aligned_cols=77 Identities=25% Similarity=0.379 Sum_probs=47.5
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHHH-HcCCCE-EE--eCCCcc-HH---HHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DLGADV-CI--NYKTED-FV---ARV 210 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~-~~g~~~-~~--~~~~~~-~~---~~~ 210 (335)
+.++|| +|++|.+|..++..+...|++|+++.+ ++.+.+.+. .++... .+ |..+.. +. +.+
T Consensus 5 ~k~ilI----------tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (253)
T PRK08642 5 EQTVLV----------TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATA 74 (253)
T ss_pred CCEEEE----------eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 467999 999999999999999889999988754 444443332 333221 12 332221 22 222
Q ss_pred HHHhCCCcccEEEeCCC
Q 019790 211 KEETGGKGVDVILDCMG 227 (335)
Q Consensus 211 ~~~~~~~~~d~vid~~g 227 (335)
.+.. +.++|++|.+.|
T Consensus 75 ~~~~-g~~id~li~~ag 90 (253)
T PRK08642 75 TEHF-GKPITTVVNNAL 90 (253)
T ss_pred HHHh-CCCCeEEEECCC
Confidence 2222 234899999875
No 434
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.25 E-value=0.56 Score=41.23 Aligned_cols=79 Identities=16% Similarity=0.282 Sum_probs=47.3
Q ss_pred CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecC---hhhHHHHH-HcCCCEE--EeCCCcc-HHHH
Q 019790 139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS---EEKLAVCK-DLGADVC--INYKTED-FVAR 209 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~---~~~~~~~~-~~g~~~~--~~~~~~~-~~~~ 209 (335)
.+.++|| .|+ ++++|.++++.+...|++|+++.+. +++.+.+. +++.... .|-.+.+ ..+.
T Consensus 5 ~~k~vlI----------tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 74 (260)
T PRK06997 5 AGKRILI----------TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDAL 74 (260)
T ss_pred CCcEEEE----------eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHH
Confidence 4678999 995 5799999999888899999987543 33333332 3343222 2333322 2222
Q ss_pred HHHHhC-CCcccEEEeCCC
Q 019790 210 VKEETG-GKGVDVILDCMG 227 (335)
Q Consensus 210 ~~~~~~-~~~~d~vid~~g 227 (335)
+.+... .+++|++++++|
T Consensus 75 ~~~~~~~~g~iD~lvnnAG 93 (260)
T PRK06997 75 FASLGQHWDGLDGLVHSIG 93 (260)
T ss_pred HHHHHHHhCCCcEEEEccc
Confidence 222111 136999999886
No 435
>PRK07069 short chain dehydrogenase; Validated
Probab=92.21 E-value=0.81 Score=39.59 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=29.0
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHH
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV 189 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~ 189 (335)
+|+++.+|..+++.+...|++|+++.++ .++.+.
T Consensus 5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~ 39 (251)
T PRK07069 5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDA 39 (251)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHH
Confidence 9999999999999998899999999987 544443
No 436
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.21 E-value=0.72 Score=40.07 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.1
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
.++|| .|++|.+|..++..+...|++|++++++.
T Consensus 3 k~vlI----------tG~sg~iG~~la~~L~~~g~~vi~~~r~~ 36 (256)
T PRK12745 3 PVALV----------TGGRRGIGLGIARALAAAGFDLAINDRPD 36 (256)
T ss_pred cEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence 46888 99999999999999999999999998753
No 437
>PRK07574 formate dehydrogenase; Provisional
Probab=92.18 E-value=0.89 Score=42.48 Aligned_cols=89 Identities=17% Similarity=0.098 Sum_probs=58.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.+|.| +| .|.+|..+++.++..|++|++.+++....+..+..+... . .+ +.+.. +.
T Consensus 191 ~gktVGI----------vG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~-~----~~----l~ell--~~ 248 (385)
T PRK07574 191 EGMTVGI----------VG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY-H----VS----FDSLV--SV 248 (385)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee-c----CC----HHHHh--hc
Confidence 4567877 77 899999999999999999999998753333333444321 1 11 22222 24
Q ss_pred ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790 219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~ 249 (335)
.|+|+.+.+... + ...+..|+++..+|.++.
T Consensus 249 aDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 249 CDVVTIHCPLHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 788888887422 1 345777888877776654
No 438
>PRK06940 short chain dehydrogenase; Provisional
Probab=92.16 E-value=0.83 Score=40.49 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=43.4
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHHHHHhCCCcccEEEeCCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~~~~~~~~~~d~vid~~g 227 (335)
.|+ +.+|.+++..+. .|++|+++++++++.+.+. ..+... . .|-.+.. ....+.+.....++|++|.++|
T Consensus 8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG 85 (275)
T PRK06940 8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAG 85 (275)
T ss_pred ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 775 899999998885 7999999999876654432 223222 2 2333322 2222222211236999999987
Q ss_pred h
Q 019790 228 A 228 (335)
Q Consensus 228 ~ 228 (335)
.
T Consensus 86 ~ 86 (275)
T PRK06940 86 V 86 (275)
T ss_pred c
Confidence 3
No 439
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.14 E-value=0.65 Score=46.71 Aligned_cols=78 Identities=26% Similarity=0.312 Sum_probs=51.2
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHHH
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARVK 211 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~~ 211 (335)
+.+++| +||++.+|..++..+...|++|++++++++..+.+. ..+... . .|-.+.. ..+.+.
T Consensus 371 ~k~vlI----------tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~ 440 (657)
T PRK07201 371 GKVVLI----------TGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVK 440 (657)
T ss_pred CCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 567999 999999999999998888999999999887765543 223222 1 2322222 222222
Q ss_pred HHh-CCCcccEEEeCCC
Q 019790 212 EET-GGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~-~~~~~d~vid~~g 227 (335)
+.. ...++|+++.++|
T Consensus 441 ~~~~~~g~id~li~~Ag 457 (657)
T PRK07201 441 DILAEHGHVDYLVNNAG 457 (657)
T ss_pred HHHHhcCCCCEEEECCC
Confidence 211 1125899999887
No 440
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.10 E-value=1.6 Score=39.16 Aligned_cols=95 Identities=12% Similarity=0.134 Sum_probs=65.2
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHHHHcCCCEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKDLGADVC 198 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~g~~~~ 198 (335)
+|+.....+..|....---.|.++.| +|.++.+|.-++.++...|+.|++.. ++..
T Consensus 138 ~PcTp~ai~~ll~~~~i~~~Gk~V~v----------iGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~------------- 194 (296)
T PRK14188 138 VPCTPLGCMMLLRRVHGDLSGLNAVV----------IGRSNLVGKPMAQLLLAANATVTIAHSRTRD------------- 194 (296)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCEEEE----------EcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------
Confidence 45555555555533322357889999 99999999999999999999999884 4431
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
. .+.+ +..|+|+-|+|...+... ..++++..++.+|...
T Consensus 195 -------l----~e~~--~~ADIVIsavg~~~~v~~-~~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 -------L----PAVC--RRADILVAAVGRPEMVKG-DWIKPGATVIDVGINR 233 (296)
T ss_pred -------H----HHHH--hcCCEEEEecCChhhcch-heecCCCEEEEcCCcc
Confidence 1 2222 247999999998763221 2388888888888643
No 441
>PRK07340 ornithine cyclodeaminase; Validated
Probab=92.07 E-value=1.6 Score=39.47 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=67.4
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhh-CCC-eEEEEecChhhHHHHH-HcC---CCEEEeCCCccHHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLG---ADVCINYKTEDFVARVK 211 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~-~V~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~ 211 (335)
....+++| .| +|..|.+.+..+.. .+. +|.+..+++++.+.+. ++. .... ..+..+.+
T Consensus 123 ~~~~~v~I----------iG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av- 186 (304)
T PRK07340 123 APPGDLLL----------IG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIP- 186 (304)
T ss_pred CCCCEEEE----------EC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHh-
Confidence 35567888 77 89999998888865 465 7999999988766554 332 2211 12222222
Q ss_pred HHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhH
Q 019790 212 EETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITS 261 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 261 (335)
..+|+|+.|+++.. +... .++++-.+..+|.......+++..-
T Consensus 187 -----~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~~ 230 (304)
T PRK07340 187 -----EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAPRT 230 (304)
T ss_pred -----hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCHHH
Confidence 26899999998854 3232 4788888899998776656666553
No 442
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=92.06 E-value=0.95 Score=41.06 Aligned_cols=39 Identities=18% Similarity=0.254 Sum_probs=33.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 187 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~ 187 (335)
.+.++|| +||+|.+|..++..+...|++|+++.++....
T Consensus 4 ~~k~vlV----------tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCV----------TGASGYIASWIVKLLLFRGYTINATVRDPKDR 42 (325)
T ss_pred CCCEEEE----------ECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence 4678999 99999999999999999999999888775543
No 443
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=92.04 E-value=3.3 Score=35.67 Aligned_cols=90 Identities=13% Similarity=0.261 Sum_probs=56.7
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC---eEEEEecC----hhh--------HHHHHHcCCCEEEeCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV---RVFVTAGS----EEK--------LAVCKDLGADVCINYK 202 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~---~V~~~~~~----~~~--------~~~~~~~g~~~~~~~~ 202 (335)
-.+.+++| .| +|..|..++..+...|+ ++++++++ .++ .+.++.++... .+
T Consensus 23 l~~~rvlv----------lG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-- 88 (226)
T cd05311 23 IEEVKIVI----------NG-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-- 88 (226)
T ss_pred ccCCEEEE----------EC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence 45678988 88 69999999998888897 49999987 333 22333433211 11
Q ss_pred CccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEEe
Q 019790 203 TEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 203 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 248 (335)
.++.+.+ +.+|++|++++...+ ...++.+.++..++.+.
T Consensus 89 -~~l~~~l------~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 -GTLKEAL------KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -CCHHHHH------hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 1222222 248999999974333 45566677766555444
No 444
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.00 E-value=1.2 Score=40.63 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=48.1
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHH-HcCC-CE-EE--eCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGA-DV-CI--NYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~-~~g~-~~-~~--~~~~~~~~~~~~ 211 (335)
.+.++|| +||+|.+|..++..+...| .+|++++++......+. .+.. .. .+ |-.+ .+.+.
T Consensus 3 ~~k~vLV----------TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d---~~~l~ 69 (324)
T TIGR03589 3 NNKSILI----------TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD---KERLT 69 (324)
T ss_pred CCCEEEE----------eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC---HHHHH
Confidence 3578999 9999999999998887775 68998887765543332 2221 11 22 2222 22334
Q ss_pred HHhCCCcccEEEeCCCh
Q 019790 212 EETGGKGVDVILDCMGA 228 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g~ 228 (335)
+... ++|+||.+++.
T Consensus 70 ~~~~--~iD~Vih~Ag~ 84 (324)
T TIGR03589 70 RALR--GVDYVVHAAAL 84 (324)
T ss_pred HHHh--cCCEEEECccc
Confidence 4332 48999998863
No 445
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.95 E-value=0.72 Score=38.99 Aligned_cols=78 Identities=22% Similarity=0.321 Sum_probs=55.0
Q ss_pred CCEEEEeecccccccccc-ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEEeCCC-cc---HHHHHHH
Q 019790 140 GESFLVDFCSISYSDVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKT-ED---FVARVKE 212 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g-~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~---~~~~~~~ 212 (335)
...||| .| +.|++|.+++.=....|+.|+++.|+-+....+. ++|.. .-+|-.. .. +...+++
T Consensus 7 ~k~VlI----------tgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 7 PKKVLI----------TGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred CCeEEE----------eecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 456888 54 5899999999988889999999999999888876 66642 2234333 22 2334444
Q ss_pred HhCCCcccEEEeCCCh
Q 019790 213 ETGGKGVDVILDCMGA 228 (335)
Q Consensus 213 ~~~~~~~d~vid~~g~ 228 (335)
... +..|+.++++|.
T Consensus 77 ~~~-Gkld~L~NNAG~ 91 (289)
T KOG1209|consen 77 NPD-GKLDLLYNNAGQ 91 (289)
T ss_pred CCC-CceEEEEcCCCC
Confidence 444 479999997764
No 446
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=91.92 E-value=1.4 Score=39.35 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=46.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 231 (335)
+| .|.+|...+..++..|.+|++.+++++..+.+.+.|..... ..+. +. . ...|+||-|+.....
T Consensus 6 IG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-~~----~--~~aDlVilavp~~~~ 70 (279)
T PRK07417 6 VG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STDL-SL----L--KDCDLVILALPIGLL 70 (279)
T ss_pred Ee-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCCH-hH----h--cCCCEEEEcCCHHHH
Confidence 66 89999999888888899999999999888888776642111 1111 11 1 257999999887554
No 447
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=91.91 E-value=0.57 Score=41.12 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=48.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHh-C
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVARVKEET-G 215 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~-~ 215 (335)
.+.++|| .|+++.+|.++++.+...|++|+++.+++++.+. ..... ..|-.+.. +.+.+.+.. .
T Consensus 8 ~~k~vlI----------tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 8 QGKIIIV----------TGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999 9999999999999999999999999877654321 11111 12333322 222122111 1
Q ss_pred CCcccEEEeCCC
Q 019790 216 GKGVDVILDCMG 227 (335)
Q Consensus 216 ~~~~d~vid~~g 227 (335)
..++|+++.++|
T Consensus 75 ~g~id~li~~Ag 86 (266)
T PRK06171 75 FGRIDGLVNNAG 86 (266)
T ss_pred cCCCCEEEECCc
Confidence 136899999887
No 448
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=91.90 E-value=0.7 Score=42.36 Aligned_cols=33 Identities=15% Similarity=0.115 Sum_probs=30.2
Q ss_pred EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 184 (335)
Q Consensus 142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~ 184 (335)
++|| +||+|-+|..+++.+...|.+|++++++.
T Consensus 2 ~vlV----------TGatGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 2 IALI----------TGITGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred eEEE----------EcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 6888 99999999999999999999999998764
No 449
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=91.87 E-value=0.8 Score=39.21 Aligned_cols=73 Identities=23% Similarity=0.263 Sum_probs=43.5
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecCh-hhHH----HHHHcCCCE-E--EeCCCccHHHH-HHHHh-CCCcccEEEeC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGADV-C--INYKTEDFVAR-VKEET-GGKGVDVILDC 225 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~----~~~~~g~~~-~--~~~~~~~~~~~-~~~~~-~~~~~d~vid~ 225 (335)
.|++|.+|..++..+...|++|+++.++. ++.+ .+...+... . .|-.+....+. +.+.. .-.++|.++.+
T Consensus 4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 83 (239)
T TIGR01830 4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNN 83 (239)
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 89999999999999998999999998764 2222 223334321 1 23333222111 11110 01368999998
Q ss_pred CCh
Q 019790 226 MGA 228 (335)
Q Consensus 226 ~g~ 228 (335)
.|.
T Consensus 84 ag~ 86 (239)
T TIGR01830 84 AGI 86 (239)
T ss_pred CCC
Confidence 874
No 450
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=91.87 E-value=1.8 Score=39.50 Aligned_cols=88 Identities=19% Similarity=0.163 Sum_probs=61.0
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.++.| .| .|.+|.+.++.++..|++|....++.. .+..+..++.++ + + .+.. +.
T Consensus 145 ~gktvGI----------iG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~-~-----l----~ell--~~ 200 (324)
T COG1052 145 RGKTLGI----------IG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV-D-----L----DELL--AE 200 (324)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec-c-----H----HHHH--Hh
Confidence 4678888 77 899999999999999999999998865 333334444332 1 2 2222 14
Q ss_pred ccEEEeCCCh-hhH-----HHhhccccCCCEEEEEecc
Q 019790 219 VDVILDCMGA-SYF-----QRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 219 ~d~vid~~g~-~~~-----~~~~~~l~~~G~~v~~g~~ 250 (335)
.|++.-+.+. ... ...+..|++++.+|-.+.-
T Consensus 201 sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 201 SDIISLHCPLTPETRHLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred CCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence 7888876664 221 4568889999999877643
No 451
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=91.87 E-value=1.6 Score=35.44 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=58.0
Q ss_pred cCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 119 ~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
.+|+.....+..|....---+|.+++| .|.+..+|.-+..++...|+.|+..-..-
T Consensus 15 ~~PcTp~aii~lL~~~~~~l~Gk~v~V----------vGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------- 70 (160)
T PF02882_consen 15 FVPCTPLAIIELLEYYGIDLEGKKVVV----------VGRSNIVGKPLAMLLLNKGATVTICHSKT-------------- 70 (160)
T ss_dssp S--HHHHHHHHHHHHTT-STTT-EEEE----------E-TTTTTHHHHHHHHHHTT-EEEEE-TTS--------------
T ss_pred CcCCCHHHHHHHHHhcCCCCCCCEEEE----------ECCcCCCChHHHHHHHhCCCeEEeccCCC--------------
Confidence 344544555555544333357889999 99889999999999999999988865321
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCC
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 252 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 252 (335)
.+ +.+.+ +..|+|+.++|...+-. -+.++++..++.+|....
T Consensus 71 -----~~----l~~~~--~~ADIVVsa~G~~~~i~-~~~ik~gavVIDvG~~~~ 112 (160)
T PF02882_consen 71 -----KN----LQEIT--RRADIVVSAVGKPNLIK-ADWIKPGAVVIDVGINYV 112 (160)
T ss_dssp -----SS----HHHHH--TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEEE
T ss_pred -----Cc----cccee--eeccEEeeeeccccccc-cccccCCcEEEecCCccc
Confidence 11 12222 25899999999866422 457788888888876543
No 452
>PRK04457 spermidine synthase; Provisional
Probab=91.85 E-value=2.8 Score=36.97 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=60.6
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHc-CC----CEEEeCCCccHHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL-GA----DVCINYKTEDFVARVK 211 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~~~~~ 211 (335)
.+..+||+ +| ++.|..+..+++.. +.++++++.+++-.+.+++. +. ..+ .....+..+.+.
T Consensus 65 ~~~~~vL~----------IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv-~v~~~Da~~~l~ 131 (262)
T PRK04457 65 PRPQHILQ----------IG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERF-EVIEADGAEYIA 131 (262)
T ss_pred CCCCEEEE----------EC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCce-EEEECCHHHHHH
Confidence 45567888 77 34577888888777 56999999999988888753 21 111 111133333333
Q ss_pred HHhCCCcccEEEe-CCC----------hhhHHHhhccccCCCEEEEE
Q 019790 212 EETGGKGVDVILD-CMG----------ASYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 212 ~~~~~~~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~ 247 (335)
.. ...||+|+- +.. .+.+..+.+.|+++|.++.-
T Consensus 132 ~~--~~~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 132 VH--RHSTDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred hC--CCCCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 22 247999973 221 12356778899999999763
No 453
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=91.83 E-value=1.4 Score=41.93 Aligned_cols=99 Identities=15% Similarity=0.088 Sum_probs=58.5
Q ss_pred hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc
Q 019790 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED 205 (335)
Q Consensus 134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~ 205 (335)
..+.++|++||= .+ .+.|..+..+++..+ .+|++++.++++.+.++ ..|... + .+.+...
T Consensus 233 ~L~~~~g~~VLD----------lc--ag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~ 300 (426)
T TIGR00563 233 WLAPQNEETILD----------AC--AAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG 300 (426)
T ss_pred HhCCCCCCeEEE----------eC--CCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc
Confidence 346678888776 54 333444445555554 69999999999887664 355442 2 2211111
Q ss_pred HHHHHHHHhCCCcccEEEe---CCChh--------------------------hHHHhhccccCCCEEEEEe
Q 019790 206 FVARVKEETGGKGVDVILD---CMGAS--------------------------YFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g 248 (335)
. ........||.|+- |+|.. .+..+++.|++||+++...
T Consensus 301 ~----~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst 368 (426)
T TIGR00563 301 P----SQWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT 368 (426)
T ss_pred c----cccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 01112346999874 55421 2356788899999998664
No 454
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=91.82 E-value=0.85 Score=39.17 Aligned_cols=70 Identities=31% Similarity=0.428 Sum_probs=43.1
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH-HH---cCCCE---EEeCCCcc-HHH---HHHHHhCCCcccEEE
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KD---LGADV---CINYKTED-FVA---RVKEETGGKGVDVIL 223 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~-~~---~g~~~---~~~~~~~~-~~~---~~~~~~~~~~~d~vi 223 (335)
+|++|.+|..++..+...|++|+++.+ ++++.+.. .+ .+... ..|..+.. +.+ .+.+.. .++|.+|
T Consensus 6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~vi 83 (242)
T TIGR01829 6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL--GPIDVLV 83 (242)
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc--CCCcEEE
Confidence 999999999999999999999999887 44433322 11 22211 12333322 222 222222 3689999
Q ss_pred eCCC
Q 019790 224 DCMG 227 (335)
Q Consensus 224 d~~g 227 (335)
.+.|
T Consensus 84 ~~ag 87 (242)
T TIGR01829 84 NNAG 87 (242)
T ss_pred ECCC
Confidence 9987
No 455
>PRK09134 short chain dehydrogenase; Provisional
Probab=91.81 E-value=1.2 Score=38.75 Aligned_cols=77 Identities=17% Similarity=0.230 Sum_probs=47.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHH----HHcCCCE-EE--eCCCcc-HHH-
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADV-CI--NYKTED-FVA- 208 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~----~~~g~~~-~~--~~~~~~-~~~- 208 (335)
.+.++|| .|+++.+|..++..+...|++|+++.+. .+..+.+ +..+... .+ |..+.. ..+
T Consensus 8 ~~k~vlI----------tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 77 (258)
T PRK09134 8 APRAALV----------TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRAL 77 (258)
T ss_pred CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 3568999 9999999999999888899999887653 3333322 1223322 12 333322 222
Q ss_pred --HHHHHhCCCcccEEEeCCC
Q 019790 209 --RVKEETGGKGVDVILDCMG 227 (335)
Q Consensus 209 --~~~~~~~~~~~d~vid~~g 227 (335)
.+.+.. .++|++|.|+|
T Consensus 78 ~~~~~~~~--~~iD~vi~~ag 96 (258)
T PRK09134 78 VARASAAL--GPITLLVNNAS 96 (258)
T ss_pred HHHHHHHc--CCCCEEEECCc
Confidence 222222 36899999987
No 456
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=91.71 E-value=4 Score=38.13 Aligned_cols=60 Identities=15% Similarity=0.169 Sum_probs=43.7
Q ss_pred ChhhhccCcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790 113 SLKDAAAFPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 185 (335)
Q Consensus 113 ~~~~aa~~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~ 185 (335)
..++|.+.....++- .++.. .+. -+|.+|.| .| .|.+|..+++.+...|++|+++..+..
T Consensus 181 ~r~~aTg~Gv~~~~~-~a~~~-~g~~l~G~rVaV----------QG-~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 181 GRSEATGYGVFYAIR-EALKA-LGDDLEGARVAV----------QG-FGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CCCcccceehHHHHH-HHHHH-cCCCcCCCEEEE----------EC-ccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 344555555555554 44433 333 48889999 77 899999999999999999999987655
No 457
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=91.64 E-value=1.7 Score=43.39 Aligned_cols=89 Identities=9% Similarity=0.037 Sum_probs=65.4
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHH---
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ--- 232 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~--- 232 (335)
.| .|.+|...++.++..|.++++++.++++.+.+++.|...++ .+..+ .++.+..+-..+|.++-+++++..+
T Consensus 406 ~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~--~~~L~~agi~~A~~vv~~~~d~~~n~~i 481 (601)
T PRK03659 406 VG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY-GDATQ--LELLRAAGAEKAEAIVITCNEPEDTMKI 481 (601)
T ss_pred ec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEE-eeCCC--HHHHHhcCCccCCEEEEEeCCHHHHHHH
Confidence 56 89999999999999999999999999999999988875543 22222 2344444556799999999985432
Q ss_pred -HhhccccCCCEEEEEe
Q 019790 233 -RNLGSLNIDGRLFIIG 248 (335)
Q Consensus 233 -~~~~~l~~~G~~v~~g 248 (335)
...+.+.|+-+++.-.
T Consensus 482 ~~~~r~~~p~~~IiaRa 498 (601)
T PRK03659 482 VELCQQHFPHLHILARA 498 (601)
T ss_pred HHHHHHHCCCCeEEEEe
Confidence 3345566777777654
No 458
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=91.61 E-value=0.9 Score=41.09 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=54.7
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-CCCEEEeCCCccHHHHHHHH--hCCCcccEEEeCCChhhH-
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEE--TGGKGVDVILDCMGASYF- 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~d~vid~~g~~~~- 231 (335)
+| .|++|......+...|.+|+.+.|++++.+.+++. |. .+..... ...-..... .....+|++|-|+=+...
T Consensus 8 iG-aGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK~~~~~ 84 (305)
T PRK05708 8 LG-AGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQ-ASLYAIPAETADAAEPIHRLLLACKAYDAE 84 (305)
T ss_pred EC-CCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCc-ceeeccCCCCcccccccCEEEEECCHHhHH
Confidence 77 79999888877777899999999988777777643 32 2211111 000000000 011378999999876543
Q ss_pred ---HHhhccccCCCEEEEEe
Q 019790 232 ---QRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 232 ---~~~~~~l~~~G~~v~~g 248 (335)
......+.++..++.+.
T Consensus 85 ~al~~l~~~l~~~t~vv~lQ 104 (305)
T PRK05708 85 PAVASLAHRLAPGAELLLLQ 104 (305)
T ss_pred HHHHHHHhhCCCCCEEEEEe
Confidence 33445566677776663
No 459
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=91.57 E-value=2 Score=33.44 Aligned_cols=91 Identities=13% Similarity=0.240 Sum_probs=54.5
Q ss_pred ccccchHHHHHHHHHhhCC--CeEEEEecCh--hh-HHHHHHcCCCEEEeCCCccH-------------------HHHHH
Q 019790 156 HGGSSGIGTFAIQMGKCQG--VRVFVTAGSE--EK-LAVCKDLGADVCINYKTEDF-------------------VARVK 211 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~--~~-~~~~~~~g~~~~~~~~~~~~-------------------~~~~~ 211 (335)
.|++|.+|..+..+.+... ++|+...... +. .+.++++....+.-.+.... .+.+.
T Consensus 4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~~l~ 83 (129)
T PF02670_consen 4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPEGLE 83 (129)
T ss_dssp ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHHHHH
T ss_pred EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChHHHH
Confidence 8999999999999999996 6888876432 22 24456788777664443221 11222
Q ss_pred HHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEE
Q 019790 212 EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFI 246 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~ 246 (335)
+......+|+++.++.+. -+...+..++.+-++.+
T Consensus 84 ~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 84 ELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 333334688888876553 36666666665544443
No 460
>PLN02928 oxidoreductase family protein
Probab=91.55 E-value=2.2 Score=39.32 Aligned_cols=96 Identities=20% Similarity=0.202 Sum_probs=59.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC----C-CEEEeCCCccHHHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----A-DVCINYKTEDFVARVKEE 213 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~ 213 (335)
.|.++.| +| .|.+|..+++.++..|++|++..++...... ..++ . ....+... . ...+.+.
T Consensus 158 ~gktvGI----------iG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~L~el 223 (347)
T PLN02928 158 FGKTVFI----------LG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-G-HEDIYEF 223 (347)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hhhccccccccccccccC-c-ccCHHHH
Confidence 4678888 87 8999999999999999999999876322111 1110 0 00000000 0 1123333
Q ss_pred hCCCcccEEEeCCChhh-----H-HHhhccccCCCEEEEEecc
Q 019790 214 TGGKGVDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 214 ~~~~~~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~~ 250 (335)
.. ..|+|+.+.+... + ...+..|+++..+|-++..
T Consensus 224 l~--~aDiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 224 AG--EADIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG 264 (347)
T ss_pred Hh--hCCEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence 32 4799999887421 1 4678889999888887643
No 461
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=91.54 E-value=3.6 Score=34.09 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=58.9
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCcc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTED 205 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~ 205 (335)
....+.++.++|- .| ++.|..++.+++.. +.+|++++.+++..+.+++ .+.. .++..+
T Consensus 25 ~~l~~~~~~~vLD----------iG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d--- 89 (187)
T PRK08287 25 SKLELHRAKHLID----------VG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE--- 89 (187)
T ss_pred HhcCCCCCCEEEE----------EC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC---
Confidence 4446677888777 66 33466666667665 4699999999887766643 3322 122211
Q ss_pred HHHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790 206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~ 247 (335)
... .. ...||+|+..... ..+..+.+.|+++|+++..
T Consensus 90 ~~~----~~-~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 90 API----EL-PGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred chh----hc-CcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 111 11 1369999864322 2356678999999998764
No 462
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.52 E-value=1.5 Score=39.38 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=63.9
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+|+........|....---.|.+|.+ .|.++.+|.-.+.++...|++|++..+...
T Consensus 139 ~PcTp~aii~lL~~~~i~l~Gk~V~v----------IG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------- 194 (301)
T PRK14194 139 TPCTPSGCLRLLEDTCGDLTGKHAVV----------IGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------- 194 (301)
T ss_pred CCCcHHHHHHHHHHhCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------
Confidence 45555555555533322346888988 886679999999999999999999864321
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEEecc
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~ 250 (335)
+ +.+.+ +..|+|+-++|...+ ... .++++..++.+|..
T Consensus 195 -----~----l~e~~--~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin 233 (301)
T PRK14194 195 -----D----AKALC--RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN 233 (301)
T ss_pred -----C----HHHHH--hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence 1 12222 247999999998653 322 38888888888754
No 463
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.50 E-value=2.2 Score=37.97 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=65.2
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+|+.....+..|....---.|.+++| .|.+..+|.-+..++...|+.|++.-.
T Consensus 136 ~PcTp~avi~lL~~~~i~l~Gk~vvV----------iGrS~iVGkPla~lL~~~~atVtichs----------------- 188 (282)
T PRK14169 136 VASTPYGIMALLDAYDIDVAGKRVVI----------VGRSNIVGRPLAGLMVNHDATVTIAHS----------------- 188 (282)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEECC-----------------
Confidence 44444445544533322247889999 999999999999999999998886631
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+.++ .+.+ +..|+++-++|...+-. -+.++++-.++.+|...
T Consensus 189 --~T~~l----~~~~--~~ADIvI~AvG~p~~i~-~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 189 --KTRNL----KQLT--KEADILVVAVGVPHFIG-ADAVKPGAVVIDVGISR 231 (282)
T ss_pred --CCCCH----HHHH--hhCCEEEEccCCcCccC-HHHcCCCcEEEEeeccc
Confidence 11222 2222 24799999999876522 45788888888988654
No 464
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=91.48 E-value=0.54 Score=40.31 Aligned_cols=100 Identities=21% Similarity=0.178 Sum_probs=59.4
Q ss_pred cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCc---------
Q 019790 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTE--------- 204 (335)
Q Consensus 135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~--------- 204 (335)
....++.++|| -| .+-|.-+..+|.. |.+|++++-++...+.+. +.+..........
T Consensus 33 l~~~~~~rvLv----------Pg--CG~g~D~~~La~~-G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i 99 (218)
T PF05724_consen 33 LALKPGGRVLV----------PG--CGKGYDMLWLAEQ-GHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRI 99 (218)
T ss_dssp HTTSTSEEEEE----------TT--TTTSCHHHHHHHT-TEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSE
T ss_pred cCCCCCCeEEE----------eC--CCChHHHHHHHHC-CCeEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCce
Confidence 45678889999 44 5556777777765 999999999999888873 3332111100000
Q ss_pred -cHHHHHHHHhCC--CcccEEEeCCCh---------hhHHHhhccccCCCEEEEE
Q 019790 205 -DFVARVKEETGG--KGVDVILDCMGA---------SYFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 205 -~~~~~~~~~~~~--~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~ 247 (335)
-+...+-+.... +.||.|+|+..- ....++.+.|+++|++.++
T Consensus 100 ~~~~gDfF~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~lLi 154 (218)
T PF05724_consen 100 TIYCGDFFELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGLLI 154 (218)
T ss_dssp EEEES-TTTGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEEEE
T ss_pred EEEEcccccCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 000011111111 269999997642 2246778899999995444
No 465
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.42 E-value=3.4 Score=36.83 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=66.5
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+|+.....+..|....---.|.+++| .|.+..+|.-+..++...|+.|++.-.
T Consensus 139 ~PcTp~avi~ll~~y~i~l~Gk~vvV----------iGrS~iVGkPla~lL~~~~atVt~chs----------------- 191 (284)
T PRK14177 139 LPCTPYGMVLLLKEYGIDVTGKNAVV----------VGRSPILGKPMAMLLTEMNATVTLCHS----------------- 191 (284)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCCcchHHHHHHHHHCCCEEEEeCC-----------------
Confidence 45544444544533322356889999 999999999999999999998887652
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
++.+. .+.+ +..|+++-++|...+-. -+.++++-.++.+|...
T Consensus 192 --~T~~l----~~~~--~~ADIvIsAvGk~~~i~-~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 192 --KTQNL----PSIV--RQADIIVGAVGKPEFIK-ADWISEGAVLLDAGYNP 234 (284)
T ss_pred --CCCCH----HHHH--hhCCEEEEeCCCcCccC-HHHcCCCCEEEEecCcc
Confidence 12222 2222 25899999999877522 56788898889998643
No 466
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=91.38 E-value=1.9 Score=42.50 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=61.0
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF---- 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~---- 231 (335)
.| .|.+|..+++.++..|.++++++.++++.+.+++.+...+. .+..+ ++..+..+-+.+|.++-+++++..
T Consensus 423 ~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~--~~~L~~a~i~~a~~viv~~~~~~~~~~i 498 (558)
T PRK10669 423 VG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVL-GNAAN--EEIMQLAHLDCARWLLLTIPNGYEAGEI 498 (558)
T ss_pred EC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEE-cCCCC--HHHHHhcCccccCEEEEEcCChHHHHHH
Confidence 56 89999999999999999999999999999999988766544 22222 233333444578988877766431
Q ss_pred HHhhccccCCCEEEEE
Q 019790 232 QRNLGSLNIDGRLFII 247 (335)
Q Consensus 232 ~~~~~~l~~~G~~v~~ 247 (335)
....+...++-+++..
T Consensus 499 v~~~~~~~~~~~iiar 514 (558)
T PRK10669 499 VASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHCCCCeEEEE
Confidence 2233444555666654
No 467
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=91.38 E-value=0.45 Score=42.79 Aligned_cols=88 Identities=17% Similarity=0.109 Sum_probs=54.9
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC---CccHHHHHHHHhCCCcccEEEeCCChhhHH
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK---TEDFVARVKEETGGKGVDVILDCMGASYFQ 232 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 232 (335)
+| +|.+|.+.+..+...|.+|+++++++++.+.+++.|.... +.. .........+. .++|++|-|+....+.
T Consensus 6 iG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~---~~~d~vila~k~~~~~ 80 (304)
T PRK06522 6 LG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLE-DGEITVPVLAADDPAEL---GPQDLVILAVKAYQLP 80 (304)
T ss_pred EC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCccc-CCceeecccCCCChhHc---CCCCEEEEecccccHH
Confidence 77 7999999988888889999999998887777766554210 000 00000011111 4799999999876554
Q ss_pred Hhhccc----cCCCEEEEEe
Q 019790 233 RNLGSL----NIDGRLFIIG 248 (335)
Q Consensus 233 ~~~~~l----~~~G~~v~~g 248 (335)
.++..+ .++..++.+.
T Consensus 81 ~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 81 AALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred HHHHHHhhhcCCCCEEEEec
Confidence 444444 3445566553
No 468
>PLN02240 UDP-glucose 4-epimerase
Probab=91.35 E-value=1.1 Score=41.22 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=30.1
Q ss_pred CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183 (335)
Q Consensus 140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~ 183 (335)
+.++|| .|++|.+|..+++.+...|.+|+++++.
T Consensus 5 ~~~vlI----------tGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILV----------TGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999 9999999999999998889999998753
No 469
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=91.30 E-value=0.74 Score=40.92 Aligned_cols=91 Identities=12% Similarity=0.185 Sum_probs=54.5
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHhCCCc-ccEEEeCCChh---
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVARVKEETGGKG-VDVILDCMGAS--- 229 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~~~~~-~d~vid~~g~~--- 229 (335)
+|++|.+|..+++.+...|.+|.+++|++++.. ..+... ..|..+.+ +.+.++....-.+ +|.+|-+.+..
T Consensus 5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~ 81 (285)
T TIGR03649 5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDL 81 (285)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCCh
Confidence 999999999999999999999999999876432 122222 23444432 2222211111135 89998777631
Q ss_pred --hHHHhhccccCCC--EEEEEec
Q 019790 230 --YFQRNLGSLNIDG--RLFIIGT 249 (335)
Q Consensus 230 --~~~~~~~~l~~~G--~~v~~g~ 249 (335)
.....++.++..| +++.++.
T Consensus 82 ~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 82 APPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred hHHHHHHHHHHHHcCCCEEEEeec
Confidence 1233444444443 6777654
No 470
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.29 E-value=2.3 Score=37.92 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=64.9
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
.||........|....---.|.+++| .|.+..+|.-+..++...++.|++.-.
T Consensus 138 ~PcTp~av~~lL~~~~i~l~Gk~vvV----------iGrS~iVG~Pla~lL~~~~atVt~chs----------------- 190 (284)
T PRK14190 138 LPCTPHGILELLKEYNIDISGKHVVV----------VGRSNIVGKPVGQLLLNENATVTYCHS----------------- 190 (284)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEEeC-----------------
Confidence 44444444444433222247889999 999999999999999999999887631
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+.+ +.+.+ +..|+++-++|...+ ---+.++++..++.+|...
T Consensus 191 --~t~~----l~~~~--~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 191 --KTKN----LAELT--KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred --Cchh----HHHHH--HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 1111 22222 248999999998764 2245678888888988654
No 471
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=91.28 E-value=2 Score=43.00 Aligned_cols=88 Identities=11% Similarity=0.158 Sum_probs=63.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF---- 231 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~---- 231 (335)
.| .|.+|...++.++..|.++++++.++++.+.+++.|...++ .+..+ .++.+..+-..+|.++-+++++..
T Consensus 406 ~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~--~~~L~~agi~~A~~vvv~~~d~~~n~~i 481 (621)
T PRK03562 406 AG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFY-GDATR--MDLLESAGAAKAEVLINAIDDPQTSLQL 481 (621)
T ss_pred Ee-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEE-EeCCC--HHHHHhcCCCcCCEEEEEeCCHHHHHHH
Confidence 66 89999999999999999999999999999999988875443 23222 233444455678999999987542
Q ss_pred HHhhccccCCCEEEEE
Q 019790 232 QRNLGSLNIDGRLFII 247 (335)
Q Consensus 232 ~~~~~~l~~~G~~v~~ 247 (335)
....+.+.|+-+++.-
T Consensus 482 ~~~ar~~~p~~~iiaR 497 (621)
T PRK03562 482 VELVKEHFPHLQIIAR 497 (621)
T ss_pred HHHHHHhCCCCeEEEE
Confidence 2334555566666554
No 472
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=91.27 E-value=2.2 Score=38.24 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=66.7
Q ss_pred cCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 119 ~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
.+|+.....+..|....---.|.+++| .|.+..+|.-+..++...|+.|++.-..
T Consensus 146 ~~PcTp~avi~lL~~~~i~l~Gk~vvV----------IGRS~iVGkPla~lL~~~~ATVtvchs~--------------- 200 (299)
T PLN02516 146 FLPCTPKGCLELLSRSGIPIKGKKAVV----------VGRSNIVGLPVSLLLLKADATVTVVHSR--------------- 200 (299)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEeCCC---------------
Confidence 345555555555543332346889999 9999999999999999999988887421
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
+.+. .+.+ +..|+++-++|...+- --++++++-.++.+|...
T Consensus 201 ----T~nl----~~~~--~~ADIvv~AvGk~~~i-~~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 201 ----TPDP----ESIV--READIVIAAAGQAMMI-KGDWIKPGAAVIDVGTNA 242 (299)
T ss_pred ----CCCH----HHHH--hhCCEEEEcCCCcCcc-CHHHcCCCCEEEEeeccc
Confidence 1222 2222 2579999999986432 246788898888988654
No 473
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=91.27 E-value=0.58 Score=47.12 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=51.2
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh---------------------hHHHHHHcCCCE
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---------------------KLAVCKDLGADV 197 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~ 197 (335)
.+.+|+| +| +|+.|++++..+...|++|+++.+.+. +.+.++++|.+.
T Consensus 326 ~~~~VaI----------IG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~ 394 (654)
T PRK12769 326 SDKRVAI----------IG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEF 394 (654)
T ss_pred CCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEE
Confidence 5778999 88 799999999999999999999986532 344556677655
Q ss_pred EEeCCC-ccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 198 CINYKT-EDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 198 ~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
.++..- .+. .+.+.. ..||.+|.++|.
T Consensus 395 ~~~~~v~~~i--~~~~~~--~~~DavilAtGa 422 (654)
T PRK12769 395 ELNCEVGKDI--SLESLL--EDYDAVFVGVGT 422 (654)
T ss_pred ECCCEeCCcC--CHHHHH--hcCCEEEEeCCC
Confidence 443321 111 111111 269999999886
No 474
>PRK04266 fibrillarin; Provisional
Probab=91.25 E-value=4.3 Score=34.97 Aligned_cols=100 Identities=15% Similarity=0.075 Sum_probs=58.4
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH----cCCCEEEeCCCccHH
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFV 207 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~ 207 (335)
+..++++|++||= .| .+.|..+..+++..+ .+|++++.+++..+.+.+ ...-..+..+....
T Consensus 66 ~~l~i~~g~~VlD----------~G--~G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~- 132 (226)
T PRK04266 66 KNFPIKKGSKVLY----------LG--AASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKP- 132 (226)
T ss_pred hhCCCCCCCEEEE----------Ec--cCCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCc-
Confidence 3468889998887 66 334555566666653 489999999876664432 21112222222111
Q ss_pred HHHHHHhCCCcccEEEeCCChh-----hHHHhhccccCCCEEEEE
Q 019790 208 ARVKEETGGKGVDVILDCMGAS-----YFQRNLGSLNIDGRLFII 247 (335)
Q Consensus 208 ~~~~~~~~~~~~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~ 247 (335)
...... . ..+|+++-..... .+..+.+.|+++|+++..
T Consensus 133 ~~~~~l-~-~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 133 ERYAHV-V-EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred chhhhc-c-ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 000111 1 2599998544321 246778899999999874
No 475
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.23 E-value=1.1 Score=38.38 Aligned_cols=72 Identities=18% Similarity=0.266 Sum_probs=46.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 217 (335)
.+.+++| .|+++.+|..++..+...|++|+++.++..... ... ..+..+-.+..+.+.+.. .
T Consensus 4 ~~k~~lV----------tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~--~ 66 (235)
T PRK06550 4 MTKTVLI----------TGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----SGNFHFLQLDLSDDLEPLFDWV--P 66 (235)
T ss_pred CCCEEEE----------cCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----CCcEEEEECChHHHHHHHHHhh--C
Confidence 3568999 999999999999988888999999987653321 111 112111111123333333 3
Q ss_pred cccEEEeCCC
Q 019790 218 GVDVILDCMG 227 (335)
Q Consensus 218 ~~d~vid~~g 227 (335)
++|+++.++|
T Consensus 67 ~id~lv~~ag 76 (235)
T PRK06550 67 SVDILCNTAG 76 (235)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 476
>PRK13243 glyoxylate reductase; Reviewed
Probab=91.21 E-value=2 Score=39.41 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=57.4
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.+|.| +| .|.+|...++.++..|++|++.+++.... .....+.. . .++.+ ... .
T Consensus 149 ~gktvgI----------iG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~--~----~~l~e----ll~--~ 204 (333)
T PRK13243 149 YGKTIGI----------IG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAE--Y----RPLEE----LLR--E 204 (333)
T ss_pred CCCEEEE----------EC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCE--e----cCHHH----HHh--h
Confidence 4678888 77 89999999999999999999998865432 22233331 1 12222 221 3
Q ss_pred ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790 219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~ 249 (335)
.|+|+-|+.... + ...+..++++..++.++.
T Consensus 205 aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 205 SDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred CCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 688888886422 1 345677888877776654
No 477
>PLN03139 formate dehydrogenase; Provisional
Probab=91.18 E-value=1.1 Score=41.89 Aligned_cols=89 Identities=16% Similarity=0.147 Sum_probs=58.5
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 218 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.+|.| +| .|.+|...++.++..|++|++.+++....+...+.+.... .++ .+... .
T Consensus 198 ~gktVGI----------VG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l----~ell~--~ 255 (386)
T PLN03139 198 EGKTVGT----------VG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----EDL----DAMLP--K 255 (386)
T ss_pred CCCEEEE----------Ee-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CCH----HHHHh--h
Confidence 4667888 77 8999999999999999999998876543343444443221 122 22221 3
Q ss_pred ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790 219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~ 249 (335)
.|+|+.+.+... + ...+..|+++..+|.++.
T Consensus 256 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 256 CDVVVINTPLTEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CCEEEEeCCCCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 688888776421 1 345777888777776654
No 478
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.11 E-value=2.1 Score=38.19 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=64.9
Q ss_pred CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790 120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~ 198 (335)
.|+........| +.-++ -.|.+++| .|.+..+|.-+..++...++.|++.-.
T Consensus 135 ~PcTp~avi~lL-~~~~i~l~Gk~vvV----------iGrS~iVGkPla~lL~~~~aTVtichs---------------- 187 (287)
T PRK14173 135 EPCTPAGVVRLL-KHYGIPLAGKEVVV----------VGRSNIVGKPLAALLLREDATVTLAHS---------------- 187 (287)
T ss_pred CCCCHHHHHHHH-HHcCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEeCC----------------
Confidence 444444444444 33333 46889999 999999999999999999998886542
Q ss_pred EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
++.+. .+.+ +..|+++-++|...+- --+.++++-.++.+|...
T Consensus 188 ---~T~~l----~~~~--~~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 188 ---KTQDL----PAVT--RRADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred ---CCCCH----HHHH--hhCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence 12222 2222 2489999999987643 356678888888888654
No 479
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=91.09 E-value=0.63 Score=40.32 Aligned_cols=44 Identities=32% Similarity=0.381 Sum_probs=37.4
Q ss_pred CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 190 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~ 190 (335)
..++.++|| .|++|.+|..+++.+...|++|++++++.+..+.+
T Consensus 9 ~~~~k~vlI----------tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~ 52 (247)
T PRK08945 9 LLKDRIILV----------TGAGDGIGREAALTYARHGATVILLGRTEEKLEAV 52 (247)
T ss_pred ccCCCEEEE----------eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence 457789999 99999999999998888899999999987654433
No 480
>PLN02686 cinnamoyl-CoA reductase
Probab=91.09 E-value=1.7 Score=40.47 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=37.4
Q ss_pred CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 191 (335)
Q Consensus 137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~ 191 (335)
...+.+||| +||+|.+|..++..+...|++|+++.++.+..+.++
T Consensus 50 ~~~~k~VLV----------TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCV----------TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEE----------ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 355789999 999999999999999999999999888766554443
No 481
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.08 E-value=2.2 Score=37.93 Aligned_cols=96 Identities=17% Similarity=0.215 Sum_probs=65.3
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
+|+........|....---.|.+++| .|.+..+|.-+..++...++.|++.-.
T Consensus 137 ~PcTp~avi~lL~~~~i~l~Gk~vvV----------vGrS~iVGkPla~lL~~~~atVtichs----------------- 189 (284)
T PRK14170 137 VPCTPAGIIELIKSTGTQIEGKRAVV----------IGRSNIVGKPVAQLLLNENATVTIAHS----------------- 189 (284)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCCcchHHHHHHHHHCCCEEEEeCC-----------------
Confidence 45555555555533322346888999 999999999999999999998886542
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
.+.++ .+.+ +..|+++-++|...+ ---+.++++..++.+|...
T Consensus 190 --~T~~l----~~~~--~~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 190 --RTKDL----PQVA--KEADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR 232 (284)
T ss_pred --CCCCH----HHHH--hhCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence 12222 2222 247999999998764 2246678888888888653
No 482
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=91.02 E-value=2 Score=35.86 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=71.6
Q ss_pred CcchHHHHHHHHHHhcCC----------CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH
Q 019790 120 FPEVACTVWSTVFMTSHL----------SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 189 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~----------~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~ 189 (335)
+||........|.. -++ -.|.+++| .|.+..+|.-+..++...|+.|++...+.-..
T Consensus 33 ~PCTp~avi~lL~~-~~i~~~~~~~~~~l~GK~vvV----------IGrS~iVGkPla~lL~~~~AtVti~~~~~~~~-- 99 (197)
T cd01079 33 LPCTPLAIVKILEF-LGIYNKILPYGNRLYGKTITI----------INRSEVVGRPLAALLANDGARVYSVDINGIQV-- 99 (197)
T ss_pred cCCCHHHHHHHHHH-hCCcccccccCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEEecCcccc--
Confidence 45555555555533 333 56889999 99999999999999999999999875332111
Q ss_pred HHHcCCCEEEeC-CC--ccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790 190 CKDLGADVCINY-KT--EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 250 (335)
Q Consensus 190 ~~~~g~~~~~~~-~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 250 (335)
....+. +.+ .+ .+....+.+.+ +..|+|+-++|...+.---+.++++-.++.+|..
T Consensus 100 ~~~~~~---~~hs~t~~~~~~~~l~~~~--~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 100 FTRGES---IRHEKHHVTDEEAMTLDCL--SQSDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred cccccc---cccccccccchhhHHHHHh--hhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 000000 111 11 12122244444 3589999999998753335778899888998854
No 483
>PRK14968 putative methyltransferase; Provisional
Probab=91.01 E-value=0.62 Score=38.44 Aligned_cols=41 Identities=27% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 191 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~ 191 (335)
.++.++|. .| ++.|..+..+++. +.++++++.+++..+.++
T Consensus 22 ~~~~~vLd----------~G--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~ 62 (188)
T PRK14968 22 KKGDRVLE----------VG--TGSGIVAIVAAKN-GKKVVGVDINPYAVECAK 62 (188)
T ss_pred cCCCEEEE----------Ec--cccCHHHHHHHhh-cceEEEEECCHHHHHHHH
Confidence 67778888 66 5556677777776 899999999988776664
No 484
>PLN00015 protochlorophyllide reductase
Probab=90.99 E-value=1 Score=40.68 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=46.3
Q ss_pred ccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH-HcC---CCE---EEeCCCcc-HHHHHHHHh-CCCcccEEEeC
Q 019790 156 HGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---ADV---CINYKTED-FVARVKEET-GGKGVDVILDC 225 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~-~~g---~~~---~~~~~~~~-~~~~~~~~~-~~~~~d~vid~ 225 (335)
+|+++++|.++++.+...| ++|+++++++++.+.+. +++ ... ..|-.+.. ....+.+.. ...++|++|++
T Consensus 3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInn 82 (308)
T PLN00015 3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCN 82 (308)
T ss_pred eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEEC
Confidence 8999999999998888889 89999999887665443 332 111 22433322 222222221 12368999998
Q ss_pred CC
Q 019790 226 MG 227 (335)
Q Consensus 226 ~g 227 (335)
+|
T Consensus 83 AG 84 (308)
T PLN00015 83 AA 84 (308)
T ss_pred CC
Confidence 86
No 485
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=90.99 E-value=0.92 Score=36.60 Aligned_cols=85 Identities=18% Similarity=0.217 Sum_probs=53.2
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC------CEEEeCC---CccHHHHHHHHhCCCcccEEEeCC
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA------DVCINYK---TEDFVARVKEETGGKGVDVILDCM 226 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~~~~~~~d~vid~~ 226 (335)
.| +|.+|.+++..+...|.+|....++++..+.+++... +..+..+ +.+..+. . ++.|+++-++
T Consensus 5 iG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a----~--~~ad~Iiiav 77 (157)
T PF01210_consen 5 IG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEA----L--EDADIIIIAV 77 (157)
T ss_dssp ES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHH----H--TT-SEEEE-S
T ss_pred EC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHH----h--CcccEEEecc
Confidence 77 7999999999999999999999999988887765321 1111110 1223222 2 3589999999
Q ss_pred ChhhHHHhhccccC---CCEEEEE
Q 019790 227 GASYFQRNLGSLNI---DGRLFII 247 (335)
Q Consensus 227 g~~~~~~~~~~l~~---~G~~v~~ 247 (335)
.+......++.+++ .+..+..
T Consensus 78 Ps~~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 78 PSQAHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GGGHHHHHHHHTTTSHTT-EEEE
T ss_pred cHHHHHHHHHHHhhccCCCCEEEE
Confidence 98766555555444 3444443
No 486
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=90.91 E-value=1.3 Score=40.12 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=31.8
Q ss_pred CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecChhhH
Q 019790 139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKL 187 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~ 187 (335)
.|.++|| +|+ +.++|.++++.+...|++|++ .++..++
T Consensus 8 ~gk~alI----------TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFI----------AGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEE----------eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 5788999 998 699999999999999999988 5554443
No 487
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=90.91 E-value=0.65 Score=40.26 Aligned_cols=101 Identities=21% Similarity=0.273 Sum_probs=59.7
Q ss_pred HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC-E-EEeCCCc
Q 019790 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD-V-CINYKTE 204 (335)
Q Consensus 133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~-~-~~~~~~~ 204 (335)
+.....+|++||= .+ ++.|..+..+++..+ .+|++++-++..++.+++ .+.. . .+..+..
T Consensus 41 ~~~~~~~g~~vLD----------v~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~ 108 (233)
T PF01209_consen 41 KLLGLRPGDRVLD----------VA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE 108 (233)
T ss_dssp HHHT--S--EEEE----------ET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT
T ss_pred hccCCCCCCEEEE----------eC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH
Confidence 4456788888887 54 667788888888875 589999999998888764 2221 1 1222222
Q ss_pred cHHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEeccC
Q 019790 205 DFVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 205 ~~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
... .....||.|.-+.|- ..+.++.+.|+|||+++.+....
T Consensus 109 ~lp------~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 109 DLP------FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp B--------S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred Hhc------CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 211 112469999876653 23578899999999998775544
No 488
>PRK01581 speE spermidine synthase; Validated
Probab=90.84 E-value=3 Score=38.53 Aligned_cols=96 Identities=17% Similarity=0.136 Sum_probs=60.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcC-----------CCEEEeCCCcc
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG-----------ADVCINYKTED 205 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~ 205 (335)
....+||+ .| |+.|.++..+++..+ .+|++++.+++..+.++.+. ..++ .....+
T Consensus 149 ~~PkrVLI----------IG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi~D 215 (374)
T PRK01581 149 IDPKRVLI----------LG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHVCD 215 (374)
T ss_pred CCCCEEEE----------EC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEECc
Confidence 33458999 87 456777788887654 58999999999888888521 0111 011122
Q ss_pred HHHHHHHHhCCCcccEEEeCCCh------------hhHHHhhccccCCCEEEEEe
Q 019790 206 FVARVKEETGGKGVDVILDCMGA------------SYFQRNLGSLNIDGRLFIIG 248 (335)
Q Consensus 206 ~~~~~~~~~~~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g 248 (335)
..+.+.+ . ...||+||--... +.+..+.+.|+++|.++.-.
T Consensus 216 a~~fL~~-~-~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 216 AKEFLSS-P-SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred HHHHHHh-c-CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 2333333 2 3469999854321 12456788999999987764
No 489
>PRK06141 ornithine cyclodeaminase; Validated
Probab=90.83 E-value=3.1 Score=37.77 Aligned_cols=102 Identities=18% Similarity=0.108 Sum_probs=61.3
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhh-CC-CeEEEEecChhhHHHHHH-c---CCCEEEeCCCccHHHHHH
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKD-L---GADVCINYKTEDFVARVK 211 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g-~~V~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~~~~ 211 (335)
....++++ +| +|.+|...+..+.. .+ .+|.+..|++++.+.+.+ + +..... . .+..+.+
T Consensus 123 ~~~~~v~i----------iG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av- 187 (314)
T PRK06141 123 KDASRLLV----------VG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAV- 187 (314)
T ss_pred CCCceEEE----------EC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHH-
Confidence 45667888 77 89999998864444 45 489999999888666543 3 322211 1 1122222
Q ss_pred HHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccCh
Q 019790 212 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 259 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 259 (335)
...|+|+.|+++..--.-.+.++++-.+..+|.......+++.
T Consensus 188 -----~~aDIVi~aT~s~~pvl~~~~l~~g~~i~~ig~~~~~~~El~~ 230 (314)
T PRK06141 188 -----RQADIISCATLSTEPLVRGEWLKPGTHLDLVGNFTPDMRECDD 230 (314)
T ss_pred -----hcCCEEEEeeCCCCCEecHHHcCCCCEEEeeCCCCcccccCCH
Confidence 2589999988875210112567777766667654443334444
No 490
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=90.80 E-value=3.1 Score=36.27 Aligned_cols=95 Identities=14% Similarity=0.075 Sum_probs=59.2
Q ss_pred CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHh
Q 019790 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEET 214 (335)
Q Consensus 136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~ 214 (335)
...++.+||- .| +|. |..+..+++ .|.+|++++.+++..+.+++... ...+..+...+ ..
T Consensus 39 ~~~~~~~vLD----------iG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~------~~ 99 (251)
T PRK10258 39 PQRKFTHVLD----------AG-CGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESL------PL 99 (251)
T ss_pred CccCCCeEEE----------ee-CCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccC------cC
Confidence 3345667777 76 343 665555554 58899999999998888876432 11221111110 01
Q ss_pred CCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEec
Q 019790 215 GGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT 249 (335)
Q Consensus 215 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 249 (335)
....||+|+....- ..+.++.+.|+++|.++....
T Consensus 100 ~~~~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 100 ATATFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred CCCcEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 23469999875431 235678889999999987643
No 491
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=90.75 E-value=2.3 Score=41.11 Aligned_cols=70 Identities=11% Similarity=0.241 Sum_probs=48.7
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
.+.+++| .| +|++|.+++..+...|++|++..++.++.+.+.+ ++.. .++.. .+.+ -.
T Consensus 331 ~~k~vlI----------iG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~------~~~~---l~ 389 (477)
T PRK09310 331 NNQHVAI----------VG-AGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE------SLPE---LH 389 (477)
T ss_pred CCCEEEE----------Ec-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh------Hhcc---cC
Confidence 4667888 88 6999999999999999999999998877665543 3321 12111 1111 13
Q ss_pred cccEEEeCCChh
Q 019790 218 GVDVILDCMGAS 229 (335)
Q Consensus 218 ~~d~vid~~g~~ 229 (335)
.+|++++|++..
T Consensus 390 ~~DiVInatP~g 401 (477)
T PRK09310 390 RIDIIINCLPPS 401 (477)
T ss_pred CCCEEEEcCCCC
Confidence 689999999764
No 492
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=90.70 E-value=3 Score=37.91 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=59.0
Q ss_pred CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 217 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 217 (335)
-.+.+|.| +| .|.+|.+.++.++..|.+|++..+.....+.+...|.. +. ++.+ .. +
T Consensus 14 LkgKtVGI----------IG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~E----aa--k 70 (335)
T PRK13403 14 LQGKTVAV----------IG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----SVSE----AV--R 70 (335)
T ss_pred hCcCEEEE----------Ee-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----CHHH----HH--h
Confidence 35678888 77 89999999999999999999987665555556666653 21 2222 22 2
Q ss_pred cccEEEeCCChhh----H-HHhhccccCCCEEEE
Q 019790 218 GVDVILDCMGASY----F-QRNLGSLNIDGRLFI 246 (335)
Q Consensus 218 ~~d~vid~~g~~~----~-~~~~~~l~~~G~~v~ 246 (335)
..|+|+-+++.+. + ...+..|+++..++.
T Consensus 71 ~ADVV~llLPd~~t~~V~~~eil~~MK~GaiL~f 104 (335)
T PRK13403 71 TAQVVQMLLPDEQQAHVYKAEVEENLREGQMLLF 104 (335)
T ss_pred cCCEEEEeCCChHHHHHHHHHHHhcCCCCCEEEE
Confidence 4799999887532 2 345777887765543
No 493
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=90.68 E-value=1.9 Score=40.12 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=48.9
Q ss_pred CCCCEEEEeeccccccccccccchHHHH--HHHHHhhCCCeEEEEecCh--hh--------------HHHHHHcCCC-EE
Q 019790 138 SPGESFLVDFCSISYSDVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSE--EK--------------LAVCKDLGAD-VC 198 (335)
Q Consensus 138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~--a~~~a~~~g~~V~~~~~~~--~~--------------~~~~~~~g~~-~~ 198 (335)
..+.++|| +|+++++|++ .++.+ ..|++++++.... .+ .+.+++.|.. ..
T Consensus 39 ~ggK~aLV----------TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~ 107 (398)
T PRK13656 39 NGPKKVLV----------IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKS 107 (398)
T ss_pred CCCCEEEE----------ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEE
Confidence 34578999 9999999999 56666 7899988887322 11 2234455643 23
Q ss_pred EeCCCcc------HHHHHHHHhCCCcccEEEeCCChh
Q 019790 199 INYKTED------FVARVKEETGGKGVDVILDCMGAS 229 (335)
Q Consensus 199 ~~~~~~~------~~~~~~~~~~~~~~d~vid~~g~~ 229 (335)
++.+-.+ +.+.+.+.. +++|+++.+++..
T Consensus 108 i~~DVss~E~v~~lie~I~e~~--G~IDiLVnSaA~~ 142 (398)
T PRK13656 108 INGDAFSDEIKQKVIELIKQDL--GQVDLVVYSLASP 142 (398)
T ss_pred EEcCCCCHHHHHHHHHHHHHhc--CCCCEEEECCccC
Confidence 3333221 233344433 3699999998865
No 494
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=90.65 E-value=1.5 Score=37.88 Aligned_cols=77 Identities=17% Similarity=0.276 Sum_probs=45.8
Q ss_pred CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCE-EE--eCCC-ccHHHHHH
Q 019790 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKT-EDFVARVK 211 (335)
Q Consensus 141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~~~~ 211 (335)
.++|| .|+++.+|..+++.+...|++|+++. +++++.+.. +..+... .+ |-.+ .++.+.+.
T Consensus 3 k~ilI----------tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 72 (248)
T PRK06947 3 KVVLI----------TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFD 72 (248)
T ss_pred cEEEE----------eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHH
Confidence 36889 99999999999999998999988765 444443322 2233222 22 2222 12222222
Q ss_pred HHh-CCCcccEEEeCCC
Q 019790 212 EET-GGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~-~~~~~d~vid~~g 227 (335)
+.. ...++|++|.++|
T Consensus 73 ~~~~~~~~id~li~~ag 89 (248)
T PRK06947 73 AVQSAFGRLDALVNNAG 89 (248)
T ss_pred HHHHhcCCCCEEEECCc
Confidence 211 1136899998886
No 495
>PLN02427 UDP-apiose/xylose synthase
Probab=90.65 E-value=1.6 Score=40.81 Aligned_cols=76 Identities=9% Similarity=0.042 Sum_probs=48.6
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCC-----C-EEEeCCCccHHHHHH
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA-----D-VCINYKTEDFVARVK 211 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~-----~-~~~~~~~~~~~~~~~ 211 (335)
+..+||| +||+|-+|..+++.+... |.+|++++++.++...+...+. . ..+..+-.+ ...+.
T Consensus 13 ~~~~VlV----------TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~ 81 (386)
T PLN02427 13 KPLTICM----------IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLE 81 (386)
T ss_pred cCcEEEE----------ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHH
Confidence 4457999 999999999999988887 5899999987655544432221 1 112111111 12344
Q ss_pred HHhCCCcccEEEeCCC
Q 019790 212 EETGGKGVDVILDCMG 227 (335)
Q Consensus 212 ~~~~~~~~d~vid~~g 227 (335)
+... ++|+||.+++
T Consensus 82 ~~~~--~~d~ViHlAa 95 (386)
T PLN02427 82 GLIK--MADLTINLAA 95 (386)
T ss_pred HHhh--cCCEEEEccc
Confidence 4433 4899999885
No 496
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=90.62 E-value=0.37 Score=43.11 Aligned_cols=59 Identities=22% Similarity=0.321 Sum_probs=38.0
Q ss_pred EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 221 (335)
Q Consensus 142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (335)
+||| +|++|.+|.++...++..|.+|+.+.++ -+|-.+.. .+.+......+|+
T Consensus 2 riLI----------~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------~~dl~d~~---~~~~~~~~~~pd~ 54 (286)
T PF04321_consen 2 RILI----------TGASGFLGSALARALKERGYEVIATSRS--------------DLDLTDPE---AVAKLLEAFKPDV 54 (286)
T ss_dssp EEEE----------ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------CS-TTSHH---HHHHHHHHH--SE
T ss_pred EEEE----------ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------hcCCCCHH---HHHHHHHHhCCCe
Confidence 6899 9999999999999999999999999765 12222222 2222222235899
Q ss_pred EEeCCC
Q 019790 222 ILDCMG 227 (335)
Q Consensus 222 vid~~g 227 (335)
||+|++
T Consensus 55 Vin~aa 60 (286)
T PF04321_consen 55 VINCAA 60 (286)
T ss_dssp EEE---
T ss_pred Eeccce
Confidence 999886
No 497
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.62 E-value=2.5 Score=37.52 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=64.1
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
.|+.....+..|....---.|.+++| .|.+..+|..+..++...|++|++..+..
T Consensus 132 ~PcTp~av~~ll~~~~i~l~Gk~V~V----------iGrs~~vGrpla~lL~~~~atVtv~hs~t--------------- 186 (279)
T PRK14178 132 APCTPNGIMTLLHEYKISIAGKRAVV----------VGRSIDVGRPMAALLLNADATVTICHSKT--------------- 186 (279)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCccccHHHHHHHHhCCCeeEEEecCh---------------
Confidence 44544445544533322246888988 89888999999999999999988876432
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
..+.+.+ +.+|+++.++|...+-. -+.++++..++.+|...
T Consensus 187 --------~~L~~~~--~~ADIvI~Avgk~~lv~-~~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 187 --------ENLKAEL--RQADILVSAAGKAGFIT-PDMVKPGATVIDVGINQ 227 (279)
T ss_pred --------hHHHHHH--hhCCEEEECCCcccccC-HHHcCCCcEEEEeeccc
Confidence 1233333 25899999999654311 23368888889998653
No 498
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=90.59 E-value=1.2 Score=36.44 Aligned_cols=79 Identities=19% Similarity=0.176 Sum_probs=53.9
Q ss_pred CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccHHHHHHHHh-C
Q 019790 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEET-G 215 (335)
Q Consensus 139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~-~ 215 (335)
.|..|++ .|+..++|...++-+...|++|+++.|+++.+..+-..-...+ +..+-..| +.+.+.+ .
T Consensus 6 aG~~vlv----------TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~w-ea~~~~l~~ 74 (245)
T KOG1207|consen 6 AGVIVLV----------TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAW-EALFKLLVP 74 (245)
T ss_pred cceEEEe----------ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHH-HHHHHhhcc
Confidence 5677888 8888899999999999999999999999998877644332222 22222334 3344433 3
Q ss_pred CCcccEEEeCCCh
Q 019790 216 GKGVDVILDCMGA 228 (335)
Q Consensus 216 ~~~~d~vid~~g~ 228 (335)
-.+.|..++++|-
T Consensus 75 v~pidgLVNNAgv 87 (245)
T KOG1207|consen 75 VFPIDGLVNNAGV 87 (245)
T ss_pred cCchhhhhccchh
Confidence 3456777777764
No 499
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=90.59 E-value=0.27 Score=43.68 Aligned_cols=64 Identities=23% Similarity=0.206 Sum_probs=42.6
Q ss_pred ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228 (335)
Q Consensus 156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 228 (335)
+|++|-+|..+++.+...|++|++++|+........... +.+..... ..+.. .++|+||.|++.
T Consensus 4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~----~~~~~--~~~D~Vvh~a~~ 67 (292)
T TIGR01777 4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLA----ESEAL--EGADAVINLAGE 67 (292)
T ss_pred EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccc----hhhhc--CCCCEEEECCCC
Confidence 999999999999999889999999999876543322111 11111111 12222 368999998873
No 500
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.56 E-value=3 Score=37.01 Aligned_cols=96 Identities=19% Similarity=0.225 Sum_probs=65.4
Q ss_pred CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199 (335)
Q Consensus 120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~ 199 (335)
.||.....+..|....---.|.+++| .|.+..+|.-+..++...|+.|++.-..
T Consensus 138 ~PcTp~av~~lL~~~~i~l~Gk~vvV----------iGrS~~VGkPla~lL~~~~AtVt~chs~---------------- 191 (278)
T PRK14172 138 LPCTPNSVITLIKSLNIDIEGKEVVV----------IGRSNIVGKPVAQLLLNENATVTICHSK---------------- 191 (278)
T ss_pred cCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEeCCC----------------
Confidence 45544445544533322247889999 9999999999999999999988776521
Q ss_pred eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 251 (335)
+.++ .+.+ +..|+++-++|...+- --+.++++-.++.+|...
T Consensus 192 ---T~~l----~~~~--~~ADIvIsAvGkp~~i-~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 192 ---TKNL----KEVC--KKADILVVAIGRPKFI-DEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred ---CCCH----HHHH--hhCCEEEEcCCCcCcc-CHHHcCCCcEEEEeeccc
Confidence 1222 2222 2489999999987652 245688888888988643
Done!