Your job contains 1 sequence.
>019794
MKLHKQSSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGS
TFFILQPILSRLGPPQELHPFHALTANQQRQSFQFHRTSSFGAKTGRVPVGIGRRRLRIV
VTGGAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE
VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEH
PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR
VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019794
(335 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 1073 1.5e-108 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 858 8.9e-86 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 853 3.0e-85 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 849 8.0e-85 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 815 3.2e-81 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 801 9.7e-80 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 799 1.6e-79 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 799 1.6e-79 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 799 1.6e-79 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 799 1.6e-79 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 799 1.6e-79 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 799 1.6e-79 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 798 2.0e-79 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 797 2.6e-79 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 797 2.6e-79 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 783 7.9e-78 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 779 2.1e-77 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 570 2.9e-55 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 526 1.3e-50 1
UNIPROTKB|C9JFU6 - symbol:UXS1 "UDP-glucuronic acid decar... 469 1.5e-44 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 457 2.8e-43 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 457 2.8e-43 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 293 6.6e-26 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 291 1.1e-25 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 284 5.9e-25 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 247 4.9e-21 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 241 2.1e-20 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 233 1.5e-19 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 228 9.9e-19 1
UNIPROTKB|C9J3T9 - symbol:UXS1 "UDP-glucuronic acid decar... 221 2.8e-18 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 219 3.0e-17 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 220 7.1e-17 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 220 7.1e-17 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 207 5.8e-15 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 203 9.6e-15 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 211 1.0e-14 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 209 1.9e-14 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 204 3.2e-14 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 199 5.4e-14 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 205 6.1e-14 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 198 9.4e-14 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 189 8.9e-13 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 189 9.5e-13 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 186 2.6e-12 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 186 2.6e-12 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 185 3.3e-12 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 184 4.2e-12 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 183 4.3e-12 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 183 5.3e-12 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 181 9.3e-12 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 179 1.9e-11 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 178 2.5e-11 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 175 4.8e-11 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 174 6.9e-11 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 174 6.9e-11 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 173 8.7e-11 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 173 9.3e-11 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 172 1.0e-10 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 176 1.5e-10 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 169 1.8e-10 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 169 2.9e-10 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 169 2.9e-10 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 168 3.1e-10 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 168 3.7e-10 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 167 5.0e-10 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 164 8.1e-10 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 163 1.3e-09 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 163 1.3e-09 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 168 1.3e-09 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 162 2.2e-09 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 161 2.5e-09 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 160 3.6e-09 1
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 163 5.0e-09 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 155 1.1e-08 1
TIGR_CMR|GSU_0626 - symbol:GSU_0626 "GDP-mannose 4,6-dehy... 155 1.2e-08 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 154 1.3e-08 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 156 1.7e-08 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 155 1.9e-08 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 152 2.3e-08 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 152 2.4e-08 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 151 3.2e-08 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 151 3.6e-08 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 150 4.1e-08 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 150 4.1e-08 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 149 4.8e-08 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 149 4.8e-08 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 118 7.0e-08 2
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 148 7.2e-08 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 148 7.2e-08 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 148 7.5e-08 1
UNIPROTKB|E1C279 - symbol:NSDHL "Uncharacterized protein"... 148 7.6e-08 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 148 1.2e-07 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 104 1.3e-07 2
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 143 2.9e-07 1
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 143 2.9e-07 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 144 3.4e-07 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 144 3.5e-07 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 144 3.5e-07 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 143 4.5e-07 1
TIGR_CMR|CBU_0689 - symbol:CBU_0689 "GDP-mannose 4,6-dehy... 140 6.4e-07 1
WARNING: Descriptions of 37 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 214/335 (63%), Positives = 250/335 (74%)
Query: 7 SSMTQRRDEETLSGQNSPYLSKTPKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQ 66
S + RR ET Y K K ++ R + Y+ +EQRL+F+LVGI I + F +
Sbjct: 3 SELINRR-HETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTIF 61
Query: 67 PILSRLGPPQE------LHPFHA-LTANQQRQSFQFHRTSSFGAKXXXXXXXXXXXXXXX 119
P ++ P + + P + + A Q ++ + GA
Sbjct: 62 PRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIGATGGKIPLGLKRKGLRV 121
Query: 120 XXXXXAGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL 179
AGFVGSHLVD+L+ RGD VIV+DNFFTGRK+N++HHF NP FE+IRHDVVEPILL
Sbjct: 122 VVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVVEPILL 181
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLE 239
EVDQIYHLACPASPVHYK+NPVKTIKTNV+GTLNMLGLAKRVGA+FLLTSTSEVYGDPL+
Sbjct: 182 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ 241
Query: 240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG 299
HPQ ETYWGNVNPIG RSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRMC+DDG
Sbjct: 242 HPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDG 301
Query: 300 RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
RVVSNFVAQA+R++P+TVYGDGKQTRSFQ+VSDLV
Sbjct: 302 RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 336
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 162/211 (76%), Positives = 182/211 (86%)
Query: 125 AGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
AGF+GSHLVDKL++ +EVIV DN+FTG KDNL +PRFELIRHDV EP+L+EVDQ
Sbjct: 37 AGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQ 96
Query: 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQK 243
IYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGA+ LLTSTSEVYGDPL HPQ
Sbjct: 97 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQP 156
Query: 244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS 303
E+YWGNVNPIG RSCYDEGKR AETL DYHR G+E+RIARIFNTYGPRM +DDGRVVS
Sbjct: 157 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 216
Query: 304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
NF+AQA+R + +TV G QTRSF YVSD+V
Sbjct: 217 NFIAQALRGEALTVQKPGTQTRSFCYVSDMV 247
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 161/211 (76%), Positives = 181/211 (85%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
AGF+GSHLVDKL+ + +EVIV DN+FTG KDNL +PRFELIRHDV EP+ +EVDQ
Sbjct: 39 AGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQ 98
Query: 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQK 243
IYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGA+ LLTSTSEVYGDPL HPQ
Sbjct: 99 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQT 158
Query: 244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS 303
E+YWGNVNPIG RSCYDEGKR AETL DYHR G+E+RIARIFNTYGPRM +DDGRVVS
Sbjct: 159 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 218
Query: 304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
NF+AQA+R + +TV G QTRSF YVSD+V
Sbjct: 219 NFIAQALRGEALTVQKPGTQTRSFCYVSDMV 249
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 159/211 (75%), Positives = 182/211 (86%)
Query: 125 AGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQ 183
AGF+GSHLVDKL++ +EV+V DN+FTG K+NL +PRFELIRHDV EP+L+EVD+
Sbjct: 53 AGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTEPLLIEVDR 112
Query: 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQK 243
IYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGA+ LLTSTSEVYGDPL HPQ
Sbjct: 113 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQP 172
Query: 244 ETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVS 303
E+YWGNVNPIG RSCYDEGKR AETL DYHR G+E+RIARIFNTYGPRM +DDGRVVS
Sbjct: 173 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS 232
Query: 304 NFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
NF+AQA+R + +TV G QTRSF YVSD+V
Sbjct: 233 NFIAQALRGEALTVQKPGTQTRSFCYVSDMV 263
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 151/210 (71%), Positives = 177/210 (84%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGF+GSHL ++L+++G +V+ +DNFFTG K N+ RFE+IRHD++EPILLEVD+I
Sbjct: 9 AGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEPILLEVDRI 68
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
Y+LACPASPVHY+YNPVKTIKT+VMGT+NMLGLAKRV A+ L STSEVYGDP HPQ E
Sbjct: 69 YNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGDPTIHPQPE 128
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
+YWGNVNPIG RSCYDEGKR AETL MDYHR GV++RIARIFNTYGPRM DGRVVSN
Sbjct: 129 SYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAEHDGRVVSN 188
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
FV QA+R + +TVYGDG QTRSF YV DL+
Sbjct: 189 FVVQALRGEDLTVYGDGSQTRSFCYVDDLL 218
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 148/210 (70%), Positives = 175/210 (83%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHLVD L+ +G EVIV+DNFFTGRK N+ H + FELI HD+V P+ +E+D+I
Sbjct: 124 AGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIVNPLFIEIDEI 183
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP HY YNPVKTIKTN MGT+N+LGLAKRV AK L+ STSEVYGDP HPQ E
Sbjct: 184 YHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPE 243
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
TYWG+VNPIG R+CYDEGKR +ETL+ Y + V+VR+ARIFNTYGPRM ++DGRVVSN
Sbjct: 244 TYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRVVSN 303
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
F+ QA+R + +TVYG+GKQTRSFQYVSDLV
Sbjct: 304 FILQALRNETITVYGNGKQTRSFQYVSDLV 333
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 91 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 150
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 151 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 210
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 211 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 270
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 271 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 301
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 40 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 99
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 100 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 159
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 160 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 219
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 220 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 250
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 216
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 216
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 216
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 216
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 97 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 156
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 157 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQTE 216
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 217 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 276
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 277 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 307
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 148/211 (70%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 98 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 157
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 158 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNE 217
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 218 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 277
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 278 FILQALQGEPLTVYGPGTQTRAFQYVSDLVN 308
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 147/211 (69%), Positives = 174/211 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 74 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 133
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 134 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQTE 193
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNP+G R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSN
Sbjct: 194 DYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSN 253
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 254 FILQALQGEPLTVYGSGSQTRAFQYVSDLVN 284
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 146/211 (69%), Positives = 172/211 (81%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 95 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 154
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 155 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNE 214
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+G RM ++DGRVVSN
Sbjct: 215 DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSN 274
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
F+ QA++ + +TVYG G QTR+FQYVSDLV+
Sbjct: 275 FILQALQGEALTVYGSGSQTRAFQYVSDLVN 305
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 143/210 (68%), Positives = 173/210 (82%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHLVDKL+ G EVI +DN+FTGRK N+ H +P FE++ HDVV P +EVDQI
Sbjct: 145 AGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHDVVNPYFVEVDQI 204
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP HY YNPVKTIKTN +GT+NMLGLAKRV A LL STSEVYGDP HPQ E
Sbjct: 205 YHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKATVLLASTSEVYGDPEVHPQPE 264
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSN 304
TYWG+VN IG R+CYDEGKR AE+L + Y++ +++RIARIFNT+GPRM ++DGRVVSN
Sbjct: 265 TYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHMNDGRVVSN 324
Query: 305 FVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
F+ QA++ +P+T+YG+G QTRSFQYV+DLV
Sbjct: 325 FIIQALQDKPITIYGNGTQTRSFQYVTDLV 354
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 106/149 (71%), Positives = 120/149 (80%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGFVGSHL DKL+ G EV V+DNFFTGRK N+ H + FELI HDVVEP+ +EVDQI
Sbjct: 40 AGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQI 99
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKE 244
YHLA PASP +Y YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E
Sbjct: 100 YHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSE 159
Query: 245 TYWGNVNPIGERSCYDEGKRTAETLTMDY 273
YWG+VNPIG R+CYDEGKR AET+ Y
Sbjct: 160 DYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 95/133 (71%), Positives = 113/133 (84%)
Query: 198 YNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS 257
YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTV 317
CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QA++ +P+TV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
Query: 318 YGDGKQTRSFQYV 330
YG G QTR+FQYV
Sbjct: 122 YGSGSQTRAFQYV 134
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 85/120 (70%), Positives = 102/120 (85%)
Query: 198 YNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS 257
YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTV 317
CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QA++ +P+TV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 84/119 (70%), Positives = 100/119 (84%)
Query: 217 LAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG 276
LAKRVGA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y +
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 277 AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 151
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 84/119 (70%), Positives = 100/119 (84%)
Query: 217 LAKRVGAKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG 276
LAKRVGA+ LL STSEVYGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y +
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 277 AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QA++ +P+TVYG G QTR+FQYVSDLV+
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 151
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 77/218 (35%), Positives = 115/218 (52%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRK---DNLVHHFRNPRFELIRHDVVEPILLEV 181
AGF+GSHL ++L+ RG V ++DNF+ G+ D L+ R ++ + + ++ +
Sbjct: 11 AGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPISVLDKNSIYELVNQH 70
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD--PLE 239
D ++HLA ++ I+TN GT N+L A + K + STSEVYG P
Sbjct: 71 DVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFASTSEVYGKAKPPF 130
Query: 240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG 299
+ + +G + I R Y K ETL + Y G+ V I R FN YGPR DG
Sbjct: 131 SEEGDRLYGATSKI--RWSYAICKTLEETLCLGYAL-EGLPVTIVRYFNIYGPRA--KDG 185
Query: 300 R---VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
V+ F++ A++ + + VYGDG+QTR F YVSD V
Sbjct: 186 PYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAV 223
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 76/219 (34%), Positives = 104/219 (47%)
Query: 125 AGFVGSHLVDKLIDRG-DEVIVIDNFFTGRKDNLVHHFRNPRFELI-------RHDVVEP 176
AG +GSH VD+L+ EVI+ DNF G ++NL R+PR ++ + D++
Sbjct: 15 AGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDINQTDILNT 74
Query: 177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS-EVYG 235
L VD ++H A Y+Y P +TN+ GT N+L G K L+ S+S VYG
Sbjct: 75 ALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYG 133
Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
D LE P E + P R+ Y K E + YH G+ R N YGPR
Sbjct: 134 DALEEPMTEAH-----PFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMNVYGPRQD 188
Query: 296 LDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
V+ + + QPMT+YGDG Q F YV D
Sbjct: 189 YRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVED 227
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 77/217 (35%), Positives = 107/217 (49%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL 179
AGF+GSH+VD L+D G +V VIDN G + NL H NP D+ E P+
Sbjct: 12 AGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDLTFEIKDICELSAPHPLFE 71
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTSEVYGDPL 238
VD ++H A V NP+ ++TNVMGT+ +L A+ K L+ ++S YG
Sbjct: 72 NVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYAASSSCYG-LA 130
Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
+ P +E + PI + Y K E + + G+ V RIFN YG R+
Sbjct: 131 DVPTREDH-----PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGTRVRTTG 185
Query: 299 --GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
G V F Q + +P TV GDG Q R F YV+D+
Sbjct: 186 VYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDV 222
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 70/220 (31%), Positives = 107/220 (48%)
Query: 125 AGFVGSHLVDKLIDRGD--EVIV--IDNF-FTGRKDNLVHHFRNPRFELIRHDVVE-P-- 176
AGF+GS V L+ G +V+V +D + G DNL +PR+ R D+ + P
Sbjct: 11 AGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDICDAPGR 70
Query: 177 -ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVY 234
++ DQ+ HLA + + ++TNV GT +L A R G A F+ ST EVY
Sbjct: 71 RVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVY 130
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G LEH W P+ S Y K + + L + +H G++VR+ R N YGPR
Sbjct: 131 GS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQ 185
Query: 295 CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +++ F+ + + +YGDG R + +V D V
Sbjct: 186 FPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHV 223
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 69/219 (31%), Positives = 103/219 (47%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL---LEV 181
AGF+GS LVD+L+ G V+ +DNF TGR NL H N + D+V L LE
Sbjct: 9 AGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAILEQ 68
Query: 182 DQ---IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS--EVYGD 236
+ ++HLA +P NV+GT+ + A++ G + ++ ++S +YG
Sbjct: 69 HRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTSSGGSIYGT 128
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCL 296
P E+P ET P S Y GK E + G++ N YGPR
Sbjct: 129 PPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQDP 183
Query: 297 D-DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ VV+ F + +P V+GDG TR + +V D+V
Sbjct: 184 HGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVV 222
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 71/224 (31%), Positives = 112/224 (50%)
Query: 125 AGFVGSHLVDKLIDRGD--------EVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVE 175
AGF+GSH V LI GD +V V+D + G NL +PRF +R D+ +
Sbjct: 9 AGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVRGDICD 67
Query: 176 PILLEVDQIYH--LACPASPVHYKYNPVKT---IKTNVMGTLNMLGLAKR--VGAKFLLT 228
L+E H +A A+ H + V + + +N++GT +L A R +G +FL
Sbjct: 68 EGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHIG-RFLHV 126
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
ST EVYG ++ W +P+ S Y K ++ L + YH+ G++V + R N
Sbjct: 127 STDEVYGS-IDTGS----WAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSN 181
Query: 289 TYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
YGPR + +++ FV + + + VYGDG+ R + +VSD
Sbjct: 182 NYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSD 223
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 228 (85.3 bits), Expect = 9.9e-19, P = 9.9e-19
Identities = 68/218 (31%), Positives = 99/218 (45%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRF----ELIRHDV-----VEP 176
GF+GSHL + L+ +G +V + + N H F E++ D+ E
Sbjct: 11 GFIGSHLCESLVKKGFKVRALSQY---NSFNFWGHLEKSPFLKDMEVVSGDLRDSFFCEK 67
Query: 177 ILLEVDQIYHLACPASPVHYKYN-PVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVY 234
I +D I+HL + + Y Y P + TNV GTLNML AK+ + F+ TSTSEVY
Sbjct: 68 ITKNIDAIFHLGALIA-IPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVY 126
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G P E + P+ +S Y K A+ + + Y+ + V IAR FNTYGPR
Sbjct: 127 GTAFYVPIDEKH-----PLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPRQ 181
Query: 295 CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
++ + Q + GD R +V D
Sbjct: 182 SAR--AIIPTIITQILSGAKEIKLGDLSPKRDLNFVLD 217
>UNIPROTKB|C9J3T9 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00915766 ProteinModelPortal:C9J3T9 SMR:C9J3T9 STRING:C9J3T9
Ensembl:ENST00000436241 ArrayExpress:C9J3T9 Bgee:C9J3T9
Uniprot:C9J3T9
Length = 52
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Query: 198 YNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPLEHPQKETYWG 248
YNP+KT+KTN +GTLNMLGLAKRVGA+ LL STSEVYGDP HPQ E YWG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG 52
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 219 (82.2 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 66/220 (30%), Positives = 104/220 (47%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
AGF+GS V K E+I++D + R+ R + + DV + +E +I
Sbjct: 9 AGFIGSAFVRKYA-YDHELIIVDKLTYAGDLRRIEEVRD-RIKFYKADVADKTAIE--EI 64
Query: 185 YHLACPASPVHYK---------YNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY 234
+ P + VH+ +P I+TNV GT ML +++ G KF+ ST EVY
Sbjct: 65 FDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFVHISTDEVY 124
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G+ KE + +P+ S Y K A+ L YHR G+ V +AR N YGP
Sbjct: 125 GEL----GKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPCNNYGPWQ 180
Query: 295 CLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +++ + +A+ +P+ VYG G R + YV D +
Sbjct: 181 YPE--KLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCI 218
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 220 (82.5 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 71/224 (31%), Positives = 105/224 (46%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRHDV----- 173
AGF+GS+L+++L+ VI +DNF TGR+ NL V + RF I D+
Sbjct: 24 AGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDIRDYAI 83
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
E ++ VD + H A S +P+ T N+ G LNML AK K F ++S
Sbjct: 84 CEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTYAASSS 143
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
YGD P+ E GN P+ S Y K E Y R G E R FN +G
Sbjct: 144 TYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIGLRYFNVFGR 198
Query: 293 RMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
R + V+ + + I+ + + + GDG+ +R F Y+ ++V
Sbjct: 199 RQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVV 242
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 220 (82.5 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 71/224 (31%), Positives = 105/224 (46%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRHDV----- 173
AGF+GS+L+++L+ VI +DNF TGR+ NL V + RF I D+
Sbjct: 24 AGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDIRDYAI 83
Query: 174 VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSE 232
E ++ VD + H A S +P+ T N+ G LNML AK K F ++S
Sbjct: 84 CEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTYAASSS 143
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
YGD P+ E GN P+ S Y K E Y R G E R FN +G
Sbjct: 144 TYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIGLRYFNVFGR 198
Query: 293 RMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
R + V+ + + I+ + + + GDG+ +R F Y+ ++V
Sbjct: 199 RQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVV 242
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 207 (77.9 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 62/220 (28%), Positives = 102/220 (46%)
Query: 125 AGFVGSHLVDKLIDRGDE--VIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE- 180
AGF+GSHL+ L R +I +DN + NL + + I DV +P+ ++
Sbjct: 15 AGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCDPLFIKH 74
Query: 181 ------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
+D ++H A + P + ++ NV GT ++ + +F+ ST EV
Sbjct: 75 LFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIYISTDEV 134
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YGD ++ P E ++P + Y K AE++ Y I R N YGPR
Sbjct: 135 YGDSVDQPFDE-----LSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSNVYGPR 189
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
+ +V+ F++ ++Q T+ G G Q+R F YVSD+
Sbjct: 190 QHHE--KVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDV 227
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 203 (76.5 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 66/217 (30%), Positives = 110/217 (50%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE----- 180
GF+GSHLVD L+ +G +V V+DN G +NL R+ + E+I ++ + LL+
Sbjct: 11 GFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQRD-KLEIINGNLTDKFLLDSAVKG 69
Query: 181 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLE 239
+ ++HLA A+ + + ++ N + T N+L +R + + S++ VYG+
Sbjct: 70 CETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASSAAVYGESGL 129
Query: 240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG 299
E Y G + PI S Y K E L Y G++ + R N G R G
Sbjct: 130 TVLDEDY-GPLLPI---SLYGASKLAGEGLISAYSHLYGLKATMFRFANIVGSRR--HSG 183
Query: 300 RVVSNFVAQAIRRQP--MTVYGDGKQTRSFQYVSDLV 334
V+ +FV++ +R+ P + V GDG Q++ + +VSD V
Sbjct: 184 -VIYDFVSR-LRQNPSSLLVLGDGSQSKPYLHVSDCV 218
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 211 (79.3 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 63/221 (28%), Positives = 105/221 (47%)
Query: 125 AGFVGSHLVDKLI-DRGD-EVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV-----VEP 176
AGF+ SH+ ++LI + D +++V+D + NL F +P F+ ++ D+ V
Sbjct: 17 AGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIASDDLVNY 76
Query: 177 ILL--EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSE 232
+L+ +D I H A + N + K N+ GT +L K G +F+ ST E
Sbjct: 77 LLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 136
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYG+ E + + + + Y K AE L M Y R G+ V R N YGP
Sbjct: 137 VYGETDEDAAVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 194
Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
+ +++ F+ A+ +P+ ++GDG RS+ Y D+
Sbjct: 195 NQFPE--KMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDV 233
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 62/221 (28%), Positives = 104/221 (47%)
Query: 125 AGFVGSHLVDKLI-DRGD-EVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV-----VEP 176
AGF+ SH+ ++L+ D +++V+D + NL +P F+ ++ D+ V
Sbjct: 15 AGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNY 74
Query: 177 ILL--EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSE 232
+L+ E+D I H A + N + K N+ GT +L K G +F+ ST E
Sbjct: 75 LLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYG+ E + + + + Y K AE L M Y R G+ V R N YGP
Sbjct: 135 VYGETDEDASVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 192
Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
+ +++ F+ A+ +P+ ++GDG RS+ Y D+
Sbjct: 193 NQFPE--KLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDV 231
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 204 (76.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 62/228 (27%), Positives = 106/228 (46%)
Query: 125 AGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE- 180
AGF+GSHL L + ++IV+D + +NL + F+ + ++++ LLE
Sbjct: 18 AGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNILDSELLEN 77
Query: 181 ------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEV 233
+D + HLA + +K + N++GT +L K K F+ ST EV
Sbjct: 78 IFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFIYVSTDEV 137
Query: 234 YGDPLEHPQKETYWGNVNPIG-ERSC------YDEGKRTAETLTMDYHRGAGVEVRIARI 286
YG L + ++N E+S Y K AE L Y++ + V I R
Sbjct: 138 YGSGLIEDNDDNN-NSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKLPVIITRA 196
Query: 287 FNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
N YGP+ + +++ F+ + + T++G GK TR++ Y+ D+V
Sbjct: 197 NNIYGPKQYPE--KIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIV 242
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 73/221 (33%), Positives = 101/221 (45%)
Query: 126 GFVGSHLVDKLIDRGDEV--IVIDNFFT--GRKDNLVHHFRNPRFELIRHDVVEP----- 176
GF+GSHL + L+ RG + V N F G D+L ++ D+ +P
Sbjct: 15 GFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKS-LDVFAGDIRDPHGVRE 73
Query: 177 ILLEVDQIYHLACP-ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVY 234
+ D + HLA A P Y ++P + TNV GTLN++ A+ +G AK + TSTSEVY
Sbjct: 74 AMKGCDVVLHLAALIAIPYSY-HSPDTYVDTNVKGTLNVVQAARELGVAKVVHTSTSEVY 132
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G P E + P+ +S Y K A+ + M ++ V I R FNTYGPR
Sbjct: 133 GTARFVPITEEH-----PLQGQSPYSASKIGADQIAMSFYSSFDTPVAIIRPFNTYGPRQ 187
Query: 295 CLDDGRVVSNFVAQAIRRQPMTV-YGDGKQTRSFQYVSDLV 334
R V I T+ G TR YV+D V
Sbjct: 188 ---SARAFIPTVITQIASGARTLRLGALHPTRDLNYVADTV 225
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 65/223 (29%), Positives = 105/223 (47%)
Query: 125 AGFVGSHLVDKLI-DRGD-EVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV-----VEP 176
AGF+ SH+ ++LI D +++V+D + NL +P F+ ++ D+ V
Sbjct: 15 AGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIASADLVNH 74
Query: 177 ILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSE 232
+L+ +D I H A + N + K N+ GT +L K G +F+ ST E
Sbjct: 75 LLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134
Query: 233 VYGDPLEHPQKETYWGN--VNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
VYG+ E + GN + + + Y K AE L M Y R G+ V R N Y
Sbjct: 135 VYGETDE----DALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 190
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
GP + +++ F+ A+R Q + ++GDG RS+ Y D+
Sbjct: 191 GPNQFPE--KLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDV 231
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 198 (74.8 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 64/225 (28%), Positives = 104/225 (46%)
Query: 125 AGFVGSHLVDKLI--DRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDV-----VEP 176
AGF+GS+ ++ + + G VI +D + G NL +NP + ++ D+ V
Sbjct: 16 AGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGDADLVRR 75
Query: 177 ILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR---VGA----KFLL 227
IL E +D + H A + P ++TNV+GT +L ++R GA +FL
Sbjct: 76 ILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIERFRFLH 135
Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
ST EVYG E Y+ P+ S Y K ++ L Y+ G+ V R
Sbjct: 136 VSTDEVYGTLGE----TGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPVLTTRCS 191
Query: 288 NTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + + +P+ VYGDG+ R + +V D
Sbjct: 192 NNYGPFQFPE--KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKD 234
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 189 (71.6 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 61/216 (28%), Positives = 100/216 (46%)
Query: 125 AGFVGSHLVDKLIDR--GDEVIVIDNF-FTGRKDNLVH---HFRNPRFELIRHDVVEPIL 178
AGF+G++ V + D V V+D + GR+++L R + ++ ++V ++
Sbjct: 9 AGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDAIRLVQGDITDAELVSQLV 68
Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
E D + H A + + NP + TNV+GT +L +R G + ST EVYGD L
Sbjct: 69 AESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHISTDEVYGD-L 127
Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
E + + + P S Y K A+ L + R GV I+ N YGP ++
Sbjct: 128 ELDDRARFTEST-PYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNYGPYQHVEK 186
Query: 299 --GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
R ++N + R+P +YG G R + +V D
Sbjct: 187 FIPRQITNVLTG---RRPK-LYGAGANVRDWIHVDD 218
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 189 (71.6 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 69/225 (30%), Positives = 102/225 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-VHHFRNPR----FELIRHDVVE-PIL 178
AGF+G HL +L+DRGD V+ +DN NL + R F +R + + P L
Sbjct: 10 AGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTSLADRPAL 69
Query: 179 LEV------DQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TST 230
++ D + +LA A V Y NP + +N++G +N+L + G K L+ S+
Sbjct: 70 EDLFAGQRFDVVVNLAAQAG-VRYSITNPHAYVDSNLVGFINILEGCRHHGVKHLVYASS 128
Query: 231 SEVYGDPLEHPQKETYWGNVN-PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
S VYG P + NV+ P+ S Y K+ E + Y G+ R F
Sbjct: 129 SSVYGANTAMPFSIHH--NVDHPV---SLYAATKKANELMAHTYSSLYGLPTTGLRFFTV 183
Query: 290 YGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
YGP D + F + +P+ VY GK R F YV D+V
Sbjct: 184 YGPWGRPDMALFL--FTKAILEGRPIDVYNFGKMQRDFTYVDDIV 226
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 186 (70.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/226 (27%), Positives = 100/226 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILL---- 179
AGF+G + V + + RG V+ +D + G + L N ++ D+ + L+
Sbjct: 10 AGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGALVTRLL 69
Query: 180 ---EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK----------RVGAKFL 226
+ D + + A + P I+TNV+GTL +L + R +FL
Sbjct: 70 QEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFL 129
Query: 227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
ST EVYG L K T P S Y K ++ L +H G+ V
Sbjct: 130 HVSTDEVYGT-LGETGKFT---ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNC 185
Query: 287 FNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ +A+A+ +P+ VYGDGKQ R + +VSD
Sbjct: 186 SNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSD 229
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 186 (70.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 63/226 (27%), Positives = 100/226 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILL---- 179
AGF+G + V + + RG V+ +D + G + L N ++ D+ + L+
Sbjct: 10 AGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGALVTRLL 69
Query: 180 ---EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK----------RVGAKFL 226
+ D + + A + P I+TNV+GTL +L + R +FL
Sbjct: 70 QEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRDAFRFL 129
Query: 227 LTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
ST EVYG L K T P S Y K ++ L +H G+ V
Sbjct: 130 HVSTDEVYGT-LGETGKFT---ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNC 185
Query: 287 FNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ +A+A+ +P+ VYGDGKQ R + +VSD
Sbjct: 186 SNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSD 229
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 185 (70.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 62/227 (27%), Positives = 102/227 (44%)
Query: 125 AGFVGSHLVDKLIDRG-DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE-- 180
AGF+GS +V +I D V+ +D + G ++L NPR+ + D+ + L+
Sbjct: 15 AGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRV 74
Query: 181 -----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----------KRVGAKF 225
D + HLA + + + I+TN++GT ++L A KR +F
Sbjct: 75 FAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKREAFRF 134
Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
ST EVYGD H + + P S Y K A+ L + R + ++
Sbjct: 135 HHISTDEVYGDL--HGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSN 191
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGPR + +++ + A+ +P+ VYGDG Q R + +V D
Sbjct: 192 CSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVED 236
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 184 (69.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 61/229 (26%), Positives = 108/229 (47%)
Query: 125 AGFVGSHLVDKLIDRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDV-----VEPI 177
AGF+GS LV LI++ + V++ D + ++L N R+ ++ D+ +E +
Sbjct: 9 AGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADICDRARLEQV 68
Query: 178 L--LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR----VGA----KFLL 227
L + D + HLA + P + I+TN++GT +L + +G +F L
Sbjct: 69 LQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQAQQRRFRL 128
Query: 228 --TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
ST EV+G E + + S Y K +A+ L +HR + + I
Sbjct: 129 HHISTDEVFGSLTE----TGLFSETSAYDPSSPYSASKASADHLVRAWHRTYALPIVITN 184
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
N YGP + +++ V+ A++ +P+ +YG+G+Q R + YV D V
Sbjct: 185 CSNNYGPFQYPE--KLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHV 231
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 183 (69.5 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 59/220 (26%), Positives = 103/220 (46%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNF----FTGRKDNLVHHFRNPRFELIRHDVVEPILLE 180
AGF+GS+ V ++ + E I NF ++G +N+ +P + ++ ++ LLE
Sbjct: 9 AGFIGSNFVHYML-QSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLE 67
Query: 181 -------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSE 232
V I + A + NP+ TNV+GT+ +L L K+ K + ST E
Sbjct: 68 HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDE 127
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYG L + T P+ S Y K +A+ + + Y++ + V + R N YGP
Sbjct: 128 VYGS-LGKTGRFT---EETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGP 183
Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
+ +++ V A+ + + +YGDG R + +V+D
Sbjct: 184 YQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTD 221
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 183 (69.5 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 63/225 (28%), Positives = 102/225 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLVHHFRN-PRFELIRHDVVE---- 175
AGF+G HL +L+ RGD ++ +DN + K+ + + P F + D+ +
Sbjct: 14 AGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKLDLADRQGM 73
Query: 176 PILLE---VDQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TST 230
L + D + HLA A V Y NP + +N++G ++L + K L+ S+
Sbjct: 74 TDLFQKHLFDTVVHLAAQAG-VRYSLTNPYAYVDSNLVGFAHILEGCRHQSVKHLVFASS 132
Query: 231 SEVYGDPLEHPQKETYWGNVN-PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
S VYG ++P E+ NV+ PI + Y K+ E + Y + R F
Sbjct: 133 SSVYGANEKYPFSES--DNVDHPI---ALYAASKKANELMAHSYAHLFQLPCTGLRFFTV 187
Query: 290 YGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
YGP D + F + +P+ VY GK +R F Y+ D+V
Sbjct: 188 YGPWGRPD--MALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIV 230
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 181 (68.8 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 64/230 (27%), Positives = 103/230 (44%)
Query: 125 AGFVGSHLVDKLIDRG-DEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHD-----VVEPI 177
+GF+GS L+ +I+ D VI ID + + L NPR+ + D V+E I
Sbjct: 10 SGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDICDLNVIENI 69
Query: 178 L--LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK----------RVGAKF 225
+ D + HLA + ++TN++GT +L +AK + +F
Sbjct: 70 FEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDEAKKTTFRF 129
Query: 226 LLTSTSEVYGD-PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
ST EVYGD L P + +P S Y K + L +HR G+ V I
Sbjct: 130 HHISTDEVYGDLSLSEPA----FTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLPVIIT 185
Query: 285 RIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
N YG + +++ ++ A+ +P+ +YGDG+Q R + +V D V
Sbjct: 186 NSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHV 233
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 62/227 (27%), Positives = 102/227 (44%)
Query: 125 AGFVGSHLVDKLIDR-GDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILL--- 179
AGF+GS LV +I+ D V+V+D + G +L ++ RF + D+ + L
Sbjct: 10 AGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV 69
Query: 180 ----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----------KRVGAKF 225
+ D + HLA + P I+TN++GT +L A K+ +F
Sbjct: 70 FTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRF 129
Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
ST EVYGD H + ++ P S Y K +++ L + R G+ I
Sbjct: 130 HHISTDEVYGDL--H-STDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITN 186
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + A+ + + VYG+G+Q R + YV D
Sbjct: 187 CSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVED 231
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 178 (67.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 61/221 (27%), Positives = 99/221 (44%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEP----I 177
AGF+ SH++ L+ D D +IV +D + NL ++ I+ D+ + +
Sbjct: 26 AGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDICDSHFVKL 85
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIK---TNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
L EV++I + A+ H + V+ + NV GT ++ A G KF+ ST EV
Sbjct: 86 LFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEV 145
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG L+ E+ +P + Y K AE Y V I R N YGP
Sbjct: 146 YGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPH 200
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + ++G G Q R+F Y +D+V
Sbjct: 201 QYPE--KVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVV 239
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 175 (66.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 65/232 (28%), Positives = 104/232 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILLE-- 180
AG++G+H V +L++ G EVIV+DN + L V + D++ LL+
Sbjct: 9 AGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQGDILNKALLQKV 68
Query: 181 -----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE-VY 234
+D + H A + P+K + NV GTL + + K L+ S+S VY
Sbjct: 69 FSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLVFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI--FNTYGP 292
GDP P E + P G + Y + K E + D H + IAR+ FN G
Sbjct: 129 GDPASLPITEDF-----PTGATNPYGQSKLMVEHILADLHH-SDPSWNIARLRYFNPVGA 182
Query: 293 R---MCLDDGRVVSN----FVAQ-AI-RRQPMTVYGDGKQTRSFQYVSDLVH 335
+ +D + N F+AQ A+ +R+ ++V+G+ T V D +H
Sbjct: 183 HASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIH 234
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 174 (66.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 64/228 (28%), Positives = 99/228 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRHDV----- 173
AGF+GS+L++ L+ +V+ +DNF TG + N V + F ++ D+
Sbjct: 24 AGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIRQLED 83
Query: 174 VEPILLE----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLT 228
+ L VD I H A S +P+ T N+ G L ML AK K F+
Sbjct: 84 CQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYA 143
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
++S YGD P+ E G P+ S Y K E +H+ G+ R FN
Sbjct: 144 ASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFN 198
Query: 289 TYGPRMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+G R D V+ + I + + + GDG+ +R F +V + V
Sbjct: 199 VFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAV 246
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 174 (66.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 64/228 (28%), Positives = 99/228 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL------VHHFRNPRFELIRHDV----- 173
AGF+GS+L++ L+ +V+ +DNF TG + N V + F ++ D+
Sbjct: 24 AGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIRQLED 83
Query: 174 VEPILLE----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLT 228
+ L VD I H A S +P+ T N+ G L ML AK K F+
Sbjct: 84 CQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYA 143
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
++S YGD P+ E G P+ S Y K E +H+ G+ R FN
Sbjct: 144 ASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFN 198
Query: 289 TYGPRMCLDDG--RVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+G R D V+ + I + + + GDG+ +R F +V + V
Sbjct: 199 VFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAV 246
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 173 (66.0 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE-- 180
AGF+GS +V +I + D V+ +D + G ++L NPR+ + D+ + L+
Sbjct: 10 AGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRV 69
Query: 181 -----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----------KRVGAKF 225
D + HLA + + + I+TN++GT N+L A K +F
Sbjct: 70 FAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSEKHEAFRF 129
Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
ST EVYGD L + + P S Y K +++ L + R G+ +
Sbjct: 130 HHISTDEVYGD-LSGT--DDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTN 186
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + A+ +P+ VYGDG Q R + +V D
Sbjct: 187 CSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVED 231
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 173 (66.0 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 65/228 (28%), Positives = 106/228 (46%)
Query: 125 AGFVGSHLVDKLIDRGDEV--IVIDNF-FTGRKDNLVHHFRNPRFELIRHDV-----VEP 176
AGF+GS+ V + + +V V+D + G + NL R EL+ D+ V+
Sbjct: 13 AGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANL-EEILGDRVELVVGDIADSELVDK 71
Query: 177 ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236
+ + D I H A + + +P I TN +GT +L A++ +F ST EVYGD
Sbjct: 72 LAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVSTDEVYGD 131
Query: 237 -PL--------EHP-QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
PL E P +K T NP S Y K ++ + + R GV+ I+
Sbjct: 132 LPLREDLPGHGEGPGEKFTAETKYNP---SSPYSSTKAASDLIVKAWVRSFGVKATISNC 188
Query: 287 FNTYGPRMCLDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP ++ R ++N ++ I+ + +YG+GK R + + +D
Sbjct: 189 SNNYGPYQHIEKFIPRQITNILS-GIKPK---LYGEGKNVRDWIHTND 232
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 172 (65.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 58/219 (26%), Positives = 98/219 (44%)
Query: 125 AGFVGSHLVDKLID--RGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILL-- 179
AGF+G++ V + R + V+D + G +++L R L++ D+ + L+
Sbjct: 9 AGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVA--DRIRLVQGDITDAALVGD 66
Query: 180 ---EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGD 236
E D + H A + +P + +NV+GT +L +R + ST EVYGD
Sbjct: 67 LVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHVSTDEVYGD 126
Query: 237 -PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
L++P + + P S Y K A+ L + R GV I+ N YGP
Sbjct: 127 LELDNPAR---FNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSNNYGPYQH 183
Query: 296 LDD--GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
++ R ++N + R+P +YG G R + +V D
Sbjct: 184 VEKFIPRQITNVLTG---RRPK-LYGAGANVRDWIHVDD 218
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 62/222 (27%), Positives = 96/222 (43%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRK-DNLVHHFRN-PRFELIRHDVV-EPILL- 179
GF+GS+ V+ + D + ID N+ RN PR++L+ D+ E +L
Sbjct: 15 GFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIKNEAAILN 74
Query: 180 -----EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--KFLLTSTSE 232
E+D + H A + + ++ NV+ + L + G +F+ ST E
Sbjct: 75 VFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRFVHISTDE 134
Query: 233 VYGDP--LEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
VYGD E+ Q + + + P G Y K E Y + + AR+ N Y
Sbjct: 135 VYGDSDLSENEQGKVEFSRLVP-GNP--YAATKIAGEAYVRAYQTQYNLPIVTARMNNIY 191
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
GP D +VV F+ A R T+ G GKQ RS+ +V D
Sbjct: 192 GPNQW--DVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDD 231
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 169 (64.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 65/226 (28%), Positives = 101/226 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-----VEPILL 179
AGFVG +L + L ++ EV F T R + + P E+I D+ V+ ++
Sbjct: 9 AGFVGKYLANHLTEQNVEV-----FGTSRNNEA----KLPNVEMISLDIMDSQRVKKVIS 59
Query: 180 EV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK--RVGAKFLLTSTSEVYG 235
++ D I+HLA +S N T TNV GTL++L + + + L +SE YG
Sbjct: 60 DIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG 119
Query: 236 D--PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
P E P E N + S Y K + L Y + G+++ R FN GP
Sbjct: 120 MILPEESPVSEE-----NQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPG 174
Query: 294 MCLDDGRVVSNFVAQAI-----RRQPMTVYGDGKQTRSFQYVSDLV 334
L G V +F Q + +++P+ G+ + R F V D+V
Sbjct: 175 QSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV 218
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 169 (64.5 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 61/221 (27%), Positives = 99/221 (44%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEP----I 177
AGF+ SH++ L+ D + +IV +D + NL ++ I+ D+ + +
Sbjct: 26 AGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDICDSHFVKL 85
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIK---TNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
L E ++I + A+ H + V+ + NV GT +L A KF+ ST EV
Sbjct: 86 LFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEKFIYVSTDEV 145
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG L+ KE + +P + Y K AE Y V I R N YGP
Sbjct: 146 YGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPH 200
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + ++G G QTR+F Y +D+V
Sbjct: 201 QYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVV 239
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 169 (64.5 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 59/227 (25%), Positives = 101/227 (44%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIVIDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE-- 180
AGF+GS +V +I + D V+ +D + G ++L NPR+ + D+ + L+
Sbjct: 10 AGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICDRAELDRV 69
Query: 181 -----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV----------GAKF 225
D + HLA + + + I+TN++GT N+L A+ +F
Sbjct: 70 FAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQHEAFRF 129
Query: 226 LLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
ST EVYGD + + P S Y K +++ L + R G+ +
Sbjct: 130 HHISTDEVYGDL---GGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTN 186
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + A+ +P+ VYGDG Q R + +V D
Sbjct: 187 CSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVED 231
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 168 (64.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 55/223 (24%), Positives = 101/223 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLE--VD 182
AG++GSH V KL+D G V+V+DN TG +D + + +L + + + ++
Sbjct: 10 AGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIE 69
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD-PLEH 240
+ H A + P++ NV G L +L + KF+ +ST+ YG+ ++
Sbjct: 70 AVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDL 129
Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG--PRMCL-D 297
+ET NP + Y E K E + Y + + + +I R FN G P + +
Sbjct: 130 ITEETM---TNPT---NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGE 183
Query: 298 DGRVVSNFVAQAIR-----RQPMTVYGDGKQTRSFQYVSDLVH 335
D R ++ + ++ R+ + ++GD T + D +H
Sbjct: 184 DHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIH 226
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 168 (64.2 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 59/221 (26%), Positives = 99/221 (44%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEP----I 177
AGF+ SH++ L+ D + +I+ +D + NL ++ I+ D+ + +
Sbjct: 26 AGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDSHFVKL 85
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIK---TNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
L E ++I + A+ H + V+ + NV GT ++ A KF+ ST EV
Sbjct: 86 LFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEV 145
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG L+ KE + +P + Y K AE Y V I R N YGP
Sbjct: 146 YGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPH 200
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + ++G G QTR+F Y +D+V
Sbjct: 201 QYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVV 239
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 167 (63.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 59/221 (26%), Positives = 99/221 (44%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEP----I 177
AGF+ SH++ L+ D + +I+ +D + NL ++ I+ D+ + +
Sbjct: 26 AGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDSHFVKL 85
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIK---TNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
L E ++I + A+ H + V+ + NV GT ++ A KF+ ST EV
Sbjct: 86 LFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEV 145
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG L+ KE + +P + Y K AE Y V I R N YGP
Sbjct: 146 YGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPH 200
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + ++G G QTR+F Y +D+V
Sbjct: 201 QYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVV 239
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 164 (62.8 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 55/187 (29%), Positives = 83/187 (44%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRH-DVVEPIL-LEVDQ 183
G +GSHL + L+ G +V + D F ++ V + I D
Sbjct: 10 GMMGSHLAEMLLAAGHDVYA--TYCRPTIDPSDLQFNGAEVDITDWCSVYDSIATFRPDA 67
Query: 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--AKFLLTSTSEVYG--DPLE 239
++HLA + P PV+T+ TN++GT + +RV AK ++ +S YG DP E
Sbjct: 68 VFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSAEYGFVDPSE 127
Query: 240 HPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDG 299
P E + P+ Y K + L YH+ G+ +ARIFN GPR G
Sbjct: 128 VPINERR--ELRPLHP---YGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGPRKV---G 179
Query: 300 RVVSNFV 306
+S+FV
Sbjct: 180 DALSDFV 186
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/224 (27%), Positives = 99/224 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTG-----RKDNLVH--HFRNPRFELIR---HDVV 174
AGF+GS + +L+ G V +D F ++D F + R E IR + +
Sbjct: 9 AGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERIRIEDSEAM 68
Query: 175 EPILLE--VDQIYHLACPASPVHYKYN-PVKTIKTNVMGTLNMLGLAKRVGAKFL-LTST 230
E + + + H A A V Y + P I N++G+ N++ L++R G + L + ST
Sbjct: 69 EAVFQRDTPEMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHLVMAST 127
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S YG + P +E P+ + Y K +E + + GV + R F+ Y
Sbjct: 128 SSAYGANQKFPFEERDSAPY-PL---TIYAATKLASELIAHSHAHLYGVPTTVLRFFSVY 183
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
GP D + F + + QP+ V+ G R F Y+ DLV
Sbjct: 184 GPWGRPDMAFFL--FTDKIFKGQPIDVFNHGDLLRDFTYIDDLV 225
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/232 (25%), Positives = 106/232 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHF--RNPRFEL--IRHDVVEPIL 178
+G++GSH +L+ G +VI++DN ++ L + ++P F IR++ + +
Sbjct: 9 SGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI 68
Query: 179 LE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
L +D + H A + P++ NV GTL ++ + K F+ +S++ VY
Sbjct: 69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGP 292
GD + P E++ P G +S Y + K E + D + + + R FN G
Sbjct: 129 GDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQ-AI-RRQPMTVYGDGKQTRSFQYVSDLVH 335
D G + +N ++AQ A+ RR + ++G+ T V D +H
Sbjct: 184 HPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 55/224 (24%), Positives = 99/224 (44%)
Query: 126 GFVGSHLVDKLIDRGD--EVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV------VEPI 177
GF+G+HL ++L+ R D EV +D G D + +P F + D+ +E
Sbjct: 325 GFIGNHLTERLL-REDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGDISIHSEWIEYH 379
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDP 237
+ + D + L A+P+ Y NP++ + + L ++ + + + STSEVYG
Sbjct: 380 VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 439
Query: 238 LEHPQKETYWGN--VNPIGE-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
+ E + N V P+ + R Y K+ + + Y G++ + R FN GPR+
Sbjct: 440 SDKYFDEDH-SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRL 498
Query: 295 C------LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
+ R ++ + + P+ + GKQ R F + D
Sbjct: 499 DNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 542
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 162 (62.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 60/219 (27%), Positives = 95/219 (43%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPIL--LE-VD 182
GF+ SH+ +L G VI D + +++ F L+ V+E L E VD
Sbjct: 37 GFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVD 93
Query: 183 QIYHLACPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD--PL 238
+++LA + + + N + N M + NM+ A+ G K F S++ +Y + L
Sbjct: 94 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQL 153
Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
E + P + Y K E L Y++ G+E RI R N YGP
Sbjct: 154 ETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKG 213
Query: 299 GR--VVSNFVAQA-IRRQPMTVYGDGKQTRSFQYVSDLV 334
GR + F +A ++GDG QTRSF ++ + V
Sbjct: 214 GREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 252
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 161 (61.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEP----I 177
AGF+ SH++ L+ D + +I+ +D + NL ++ I+ D+ +
Sbjct: 26 AGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICNSHFVKL 85
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIK---TNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
L E ++I + A+ H + V+ + NV GT ++ A KF+ ST EV
Sbjct: 86 LFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEV 145
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG L+ KE + +P + Y K AE Y I R N YGP
Sbjct: 146 YGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSNVYGPH 200
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + ++G G QTR+F Y +D+V
Sbjct: 201 QYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVV 239
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 160 (61.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 55/221 (24%), Positives = 92/221 (41%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVI--DNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE- 180
AGF+ SH+V L+ ++I D + NL ++ I+ D+ EP ++
Sbjct: 31 AGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDICEPHFIKQ 90
Query: 181 ------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
+D + H A ++ ++ NV GT ++ A KF+ ST EV
Sbjct: 91 LFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVEKFVYVSTDEV 150
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG + E+ +P + Y K AE Y V I R N YGP
Sbjct: 151 YGGSTDQEFDES-----SPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVYGPH 205
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + + ++G G Q R+F Y +D+V
Sbjct: 206 QYPE--KVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVV 244
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 163 (62.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDV------VEPIL 178
GF+G+HL ++L+ R D+ D + + + R+ P F + D+ +E +
Sbjct: 328 GFIGNHLSERLL-RDDKY---DVYGLDIGSDAIERLRSHPNFHFVEGDISIHSEWIEYHI 383
Query: 179 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSEVYGDPL 238
+ D + L A+P+ Y NP++ + + L ++ + + + STSEVYG
Sbjct: 384 KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQ 443
Query: 239 EHP-QKETYWGNVNPIG-ERSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPRMC 295
+ ++T V PI +R Y K+ + + Y GA G+ + R FN GPR+
Sbjct: 444 DKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY--GAKGLNFTLFRPFNWMGPRLD 501
Query: 296 -LDDGRV-----VSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
LD R+ ++ + + P+ ++ G+Q R F ++D
Sbjct: 502 RLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIAD 544
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 59/224 (26%), Positives = 100/224 (44%)
Query: 126 GFVGSHLVDKLIDR--GDEVIVIDNFFTGRKD-NLVHHFR-NPRFELIRHDVVE-PILL- 179
GF+GS+ ++ ++ + I D G ++ R +PR++ + + + P L+
Sbjct: 18 GFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVEAALEDQPTLIK 77
Query: 180 -----EVDQIYHLACPASPVHYKYNP-VKTIKTNVMGTLNMLGL---AKRVGAKFLL-TS 229
EVD + H A + V Y+ + TI+ N++ T +L + G K L+ S
Sbjct: 78 TLQENEVDMVIHFAA-ITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKGVKKLVHIS 136
Query: 230 TSEVYGDPLEHPQKETYWGNV-NPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
T EVYGD E ++ ++ NP Y K E + Y + + R+ N
Sbjct: 137 TDEVYGDSFEDTTPKSESASLPNPTNP---YAASKAACEMVIRSYWHSYKLPYVMVRMNN 193
Query: 289 TYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
YGPR +++ F A+ +P + GDG TRS+ YV D
Sbjct: 194 VYGPRQI--HTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVED 235
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 60/185 (32%), Positives = 89/185 (48%)
Query: 125 AGFVGSHLVDKLIDRGDEVI-VI---DNFFTGRKDNLVHHFRNPRFELIRH--DV----- 173
+G GS+L + L+ +G EV VI +F TGR D+L P L H D+
Sbjct: 10 SGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYGDLNDASS 69
Query: 174 VEPILLEV--DQIYHLACPASPVHYKYN-PVKTIKTNVMGTLNMLGLAKRVG--AKFLLT 228
+ +L EV D+IY+L S V ++ P T + + +GT+ +L + G +F
Sbjct: 70 INRVLREVRPDEIYNLGAQ-SHVRVSFDVPEYTGEIDALGTVRLLEGIRETGLNTRFYQA 128
Query: 229 STSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
S+SE+YG +E PQKET P RS Y K A +T++Y G+ +FN
Sbjct: 129 SSSELYGKVVETPQKET-----TPFYPRSPYACAKAYAYYITVNYRESYGMYACNGILFN 183
Query: 289 TYGPR 293
PR
Sbjct: 184 HESPR 188
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/171 (29%), Positives = 76/171 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEV--D 182
AG++GSH+V +L + G V+V DN TG D LVH R +L ++ + +E
Sbjct: 9 AGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHGERLVTGDLSDTARLDALFVEYGFS 68
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGDPLEH- 240
+ H A P+K N TLN+LG + G +F+ +ST+ VYG P
Sbjct: 69 TVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSSTAAVYGIPDSGV 128
Query: 241 PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
+E+ +NP Y K +E + D G+ R FN G
Sbjct: 129 AAEESATVPINP------YGTSKLMSEWMLRDVCAAHGMRSVALRYFNVAG 173
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 66/227 (29%), Positives = 98/227 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE------PIL 178
AGFVGSH L RGD V+ DNF D + R E + +VE P+L
Sbjct: 120 AGFVGSHCSLALRKRGDGVLGFDNF-NDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLL 178
Query: 179 LEV-D-----QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTST 230
++ D I HLA A + NP I +N+ G +N+L +AK + + S+
Sbjct: 179 RKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASS 238
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG E+P E + + P S Y K+ E + Y+ G+ + R F Y
Sbjct: 239 SSVYGLNTENPFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 294
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYG--DGKQT-RSFQYVSDLV 334
GP D F + + + +Y D ++ R F Y+ D+V
Sbjct: 295 GPWGRPDMAYFF--FTKDILHGKSIDIYRTQDNQEVARDFTYIDDIV 339
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 64/226 (28%), Positives = 101/226 (44%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN---PR-FELIRHDVVEPILL-- 179
GFVGSH+ L RGD V+ +DNF +L R+ R ++ D+ + LL
Sbjct: 97 GFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAK 156
Query: 180 --EV---DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTSTSE 232
+V + HLA A + NP + +N+ G +N+L + K + + S+S
Sbjct: 157 LFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSS 216
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYG + P E+ + P S Y K+ E +T Y+ G+ + R F YGP
Sbjct: 217 VYGLNEKVPFSESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGP 272
Query: 293 RMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQ----TRSFQYVSDLV 334
D +F ++ +P+T+Y GK R F Y+ D+V
Sbjct: 273 WGRPD--MAYFSFTRNILQGKPITIYR-GKNRVDLARDFTYIDDIV 315
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 57/229 (24%), Positives = 95/229 (41%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE----PILLE 180
AG++GSH + + + E+ V+DN G K + + F+ D+ + L E
Sbjct: 9 AGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDFQGVKALFE 68
Query: 181 ---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVYGD 236
D I H A NP+K N + T N++ + G KF+ +ST+ YG+
Sbjct: 69 REKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFSSTAATYGE 128
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVR--IARIFNTYGPRM 294
P ET +P+ + Y K +E + D A E + I R FN G M
Sbjct: 129 PQTPVVSET-----SPLAPINPYGRSKLMSEEVLRDASM-ANPEFKHCILRYFNVAGACM 182
Query: 295 CLDDGR------VVSNFVAQ--AIRRQPMTVYGDGKQTRSFQYVSDLVH 335
G+ ++ A+ A +R + ++GD T+ + D +H
Sbjct: 183 DYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIH 231
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 152 (58.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 58/218 (26%), Positives = 99/218 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV-----VEPILL 179
AG+VGS LV +L++ G V V D F G D+ + NP ++ D+ ++
Sbjct: 14 AGYVGSALVPQLLELGYRVTVYDTLFFG--DDFLPK-ENPYLNIVEGDIRDTERLKQCFK 70
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDPL 238
+ D + LAC ++ ++ + + N+ M+ AK G K F+ S+S VYG +
Sbjct: 71 DADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASSSSVYG--V 128
Query: 239 EHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG--AGVEVRIARIFNTYGPRMCL 296
+ T +P+ + Y++ K E L + V +R A + Y PR L
Sbjct: 129 SETKDVT---EEHPLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTIRPATLCG-YAPRQRL 184
Query: 297 D-DGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDL 333
D +++N A+ +TV+G G Q R +V D+
Sbjct: 185 DLSVNILTN---HAVNNNKITVFG-GSQLRPNLHVQDM 218
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 55/232 (23%), Positives = 104/232 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHF--RNPRFEL--IRHDVVEPIL 178
+G++GSH +L+ G +V+++DN ++ L + + P F IR++ + +
Sbjct: 9 SGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIRNEALMTEI 68
Query: 179 LE---VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
L ++ + H A + P++ NV GTL ++ + K F+ +S++ VY
Sbjct: 69 LHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLTMDYHRGAGV-EVRIARIFNTYGP 292
GD + P E++ P G +S Y + K E + D + + + R FN G
Sbjct: 129 GDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNPVGA 183
Query: 293 RMCLDDGR----VVSN---FVAQ-AI-RRQPMTVYGDGKQTRSFQYVSDLVH 335
D G + +N ++AQ A+ RR + ++G+ V D +H
Sbjct: 184 HPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIH 235
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 151 (58.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 57/221 (25%), Positives = 96/221 (43%)
Query: 125 AGFVGSHLVDKLI-DRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPI---- 177
AGF+ SH++ L+ D + +I+ +D + NL ++ I+ D+ +
Sbjct: 26 AGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDICDSHFVKR 85
Query: 178 LLEVDQIYHLACPASPVHYKYNPVKTIK---TNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
L E ++I + A+ H + V+ + NV GT ++ A KF+ ST EV
Sbjct: 86 LFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKFIYVSTDEV 145
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG L+ E+ +P + Y K AE Y V I R N YGP
Sbjct: 146 YGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPH 200
Query: 294 MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
+ +V+ F++ + ++G G Q R+F Y +D+V
Sbjct: 201 QYPE--KVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVV 239
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 150 (57.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLVHHFRNPRFELIRHDVVEP-ILL 179
AGF+GS +V++L G +V+ IDN + K + + F I+ D+ + ++
Sbjct: 9 AGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIADRNVMA 68
Query: 180 EV------DQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTS 231
E+ D++ HLA A V Y NP+ +N++G LN+L + K L+ S+S
Sbjct: 69 ELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIYASSS 127
Query: 232 EVYG--DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
VYG + + K+T +P+ S Y K++ E + Y + R F
Sbjct: 128 SVYGLNNKVPFSTKDTV---DHPV---SLYAATKKSNELMAHSYSHLYNIPTTGLRFFTV 181
Query: 290 YGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
YG D + F + + + + +G R F +V D+V
Sbjct: 182 YGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIV 224
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 150 (57.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDN----FFTGRKDNLVHHFRNPRFELIRHDVVEP-ILL 179
AGF+GS +V++L G +V+ IDN + K + + F I+ D+ + ++
Sbjct: 9 AGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIADRNVMA 68
Query: 180 EV------DQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTS 231
E+ D++ HLA A V Y NP+ +N++G LN+L + K L+ S+S
Sbjct: 69 ELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIYASSS 127
Query: 232 EVYG--DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
VYG + + K+T +P+ S Y K++ E + Y + R F
Sbjct: 128 SVYGLNNKVPFSTKDTV---DHPV---SLYAATKKSNELMAHSYSHLYNIPTTGLRFFTV 181
Query: 290 YGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
YG D + F + + + + +G R F +V D+V
Sbjct: 182 YGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIV 224
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 149 (57.5 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 59/223 (26%), Positives = 94/223 (42%)
Query: 125 AGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEPI--LL 179
AGF+G H + ++ + ID + + ++ FE + D+ + + LL
Sbjct: 15 AGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLSDNLEYLL 74
Query: 180 EVDQ----IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG---LAKRVGAKFLLTSTSE 232
++ + I + A +S +PV K N++ T N+L L +G FL ST E
Sbjct: 75 KITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIGY-FLHISTDE 133
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYGD E KE +NP Y K + + Y + + I R N YGP
Sbjct: 134 VYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPITILRPNNVYGP 188
Query: 293 RMCLDDGRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLV 334
L + Q I ++P+ V+G G R + YV D+V
Sbjct: 189 ---LQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIV 228
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 149 (57.5 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 59/223 (26%), Positives = 94/223 (42%)
Query: 125 AGFVGSHLVDKLIDR--GDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVVEPI--LL 179
AGF+G H + ++ + ID + + ++ FE + D+ + + LL
Sbjct: 15 AGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLSDNLEYLL 74
Query: 180 EVDQ----IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG---LAKRVGAKFLLTSTSE 232
++ + I + A +S +PV K N++ T N+L L +G FL ST E
Sbjct: 75 KITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIGY-FLHISTDE 133
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYGD E KE +NP Y K + + Y + + I R N YGP
Sbjct: 134 VYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPITILRPNNVYGP 188
Query: 293 RMCLDDGRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLV 334
L + Q I ++P+ V+G G R + YV D+V
Sbjct: 189 ---LQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIV 228
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 118 (46.6 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 49/169 (28%), Positives = 79/169 (46%)
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDPLEH 240
D I HLA + P++ N++ +LN++ + + K F+ +S++ VYG P E
Sbjct: 83 DGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSEL 142
Query: 241 P---QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVE--VRIARIFNTYGPR-- 293
P + +T G NP G+ K E + +D + A E V + R FN G
Sbjct: 143 PITEKSQTGQGITNPYGQT------KYMMEQILIDVGK-ANPEWNVVLLRYFNPVGAHKS 195
Query: 294 -MCLDDGRVVSN----FVAQ-AIRRQP-MTVYGDGKQTRSFQYVSDLVH 335
+ +D + V N +V+Q AI + P +T+YGD T V D +H
Sbjct: 196 GLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIH 244
Score = 72 (30.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNF 149
AGF+GSH V +L++ G V+ IDNF
Sbjct: 9 AGFIGSHTVLELLNSGYTVLCIDNF 33
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 57/230 (24%), Positives = 101/230 (43%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL---- 179
G++GSH ++I G +++DN + + L + R + ++ D+ + LL
Sbjct: 10 GYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQFVQGDIRDKALLVDLM 69
Query: 180 ---EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE-VYG 235
++ + H A + P++ NV GTL ++ + G K L+ S+S VYG
Sbjct: 70 QQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLVFSSSATVYG 129
Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYG--P 292
+P P E++ P + Y K E D+ + + + R FN G P
Sbjct: 130 EPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNPVGSHP 184
Query: 293 RMCL-DDGRVVSN----FVAQ-AI-RRQPMTVYGDGKQTRSFQYVSDLVH 335
L +D + + N FV Q A+ RR+ ++V+G T+ V D +H
Sbjct: 185 SGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIH 234
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 148 (57.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 57/230 (24%), Positives = 101/230 (43%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILL---- 179
G++GSH ++I G +++DN + + L + R + ++ D+ + LL
Sbjct: 10 GYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQFVQGDIRDKALLVDLM 69
Query: 180 ---EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE-VYG 235
++ + H A + P++ NV GTL ++ + G K L+ S+S VYG
Sbjct: 70 QQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLVFSSSATVYG 129
Query: 236 DPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYG--P 292
+P P E++ P + Y K E D+ + + + R FN G P
Sbjct: 130 EPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNPVGSHP 184
Query: 293 RMCL-DDGRVVSN----FVAQ-AI-RRQPMTVYGDGKQTRSFQYVSDLVH 335
L +D + + N FV Q A+ RR+ ++V+G T+ V D +H
Sbjct: 185 SGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIH 234
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 148 (57.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 58/230 (25%), Positives = 99/230 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILLEVD 182
AG++GSH V +LI+ G +++DN + + V E D++ L D
Sbjct: 14 AGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKEIEFHHVDIMNEKAL--D 71
Query: 183 QIYHLACPASPVHY-------KYN--PVKTIKTNVMGTLNMLGLA-KRVGAKFLLTSTSE 232
+I+ S +H+ + N P+K N+ GTL +L L K K + +S++
Sbjct: 72 EIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLVFSSSAT 131
Query: 233 VYGDPLEHPQKETY-WGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
VYGDP P E + NP G Y EG + L + +R +
Sbjct: 132 VYGDPHTVPITEDFPLSATNPYGRTKLYVEG--ILQDLCASDPEWNCIMLRYFNPVGAHP 189
Query: 292 PRMCLDDGRVVSN----FVAQ-AIRRQP-MTVYGDGKQTRSFQYVSDLVH 335
+ +D + + N +V Q AI ++P ++++G+ T V D +H
Sbjct: 190 SGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIH 239
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 148 (57.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 63/217 (29%), Positives = 97/217 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN-LVHHFRNPRFELIRHDVVEPILLEVDQ 183
+GF+G H+V+KL+D+G V V D R D+ V F +L + + P L +V
Sbjct: 18 SGFLGQHMVEKLLDKGYSVNVFD--IQKRFDHDRVQFFLG---DLCNKEALLPALQDVSV 72
Query: 184 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GDPLEH 240
+H C ASP N K N MGT ++ K G K +LTS++ V G +++
Sbjct: 73 AFH--C-ASPAPSSDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVFEGTDIKN 129
Query: 241 PQKETYWGNVNPIGERSCYDEGK--RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDD 298
++ + PI Y E K + E L+ + I R +GPR D
Sbjct: 130 GTEDLPYAK-KPI---DYYTETKILQEKEVLSANDPDNNFFTTAI-RPHGIFGPR----D 180
Query: 299 GRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
++V + A + + GDGK F YV ++VH
Sbjct: 181 PQLVPILIQAAKSGKMKFIIGDGKNLVDFTYVENVVH 217
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 60/227 (26%), Positives = 97/227 (42%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE-----LIRHDV--VEPI 177
AGFVG+H+ L RGD VI +DNF D + R E ++ D+ VE +
Sbjct: 105 AGFVGTHVSAALKRRGDGVIGLDNF-NDYYDPSLKRARRALLERSGIFIVEGDINDVELL 163
Query: 178 -----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTST 230
++ + HLA A + NP + +N+ G +N+L + K V + + S+
Sbjct: 164 RKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASS 223
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG + P E + P S Y K+ E + Y+ G+ + R F Y
Sbjct: 224 SSVYGLNTKVPFSEKDKTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 279
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVY---GDGKQTRSFQYVSDLV 334
GP D F ++ + ++++ G R F Y+ D+V
Sbjct: 280 GPWGRPDMAYFF--FTKDILKGKSISIFESANHGTVARDFTYIDDIV 324
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 104 (41.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIV-IDNF-FTGRKDNLVHHFRNPRFELIRHDVVEPILLE-- 180
AGF+GS +V +I + +V +D + G ++L +PR+ + D+ + LE
Sbjct: 9 AGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDICDRTELERV 68
Query: 181 -----VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAK---------RVGA-KF 225
D + HLA + I+TN++GT +L A+ R A +F
Sbjct: 69 FSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTERKSAFRF 128
Query: 226 LLTSTSEVYGDPLEHPQK 243
ST EVYGD L HP +
Sbjct: 129 HHISTDEVYGD-LPHPDE 145
Score = 86 (35.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 252 PIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIR 311
P S Y K +++ L + R G + N YGP + +++ + A+
Sbjct: 178 PYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPE--KLIPLVILNALE 235
Query: 312 RQPMTVYGDGKQTRSFQYVSD 332
+P+ +YG G Q R + YV D
Sbjct: 236 GKPLPIYGKGDQIRDWLYVED 256
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 60/211 (28%), Positives = 93/211 (44%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV--VEPILL-EVD 182
G++GS LV KL+++G V +D F+ G D L H P ELI DV ++P L VD
Sbjct: 13 GYIGSVLVPKLLNKGYHVKAVDRFYFG-SDKLSQH---PHLELINEDVRRLQPSLFTNVD 68
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDPLEHP 241
+ LA ++ T + N + LAK+ K ++L S+ +YG +
Sbjct: 69 YVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRYILPSSCSIYGFQ-KGA 127
Query: 242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRV 301
ET NP+ + +E K E L + +R A ++ Y PRM D
Sbjct: 128 VDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG-YSPRMRFD--LA 181
Query: 302 VSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
++ V A + + + DG Q R +V D
Sbjct: 182 INGMVYGAWEDKCIPLMRDGTQYRPMVHVQD 212
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 60/211 (28%), Positives = 93/211 (44%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDV--VEPILL-EVD 182
G++GS LV KL+++G V +D F+ G D L H P ELI DV ++P L VD
Sbjct: 13 GYIGSVLVPKLLNKGYHVKAVDRFYFG-SDKLSQH---PHLELINEDVRRLQPSLFTNVD 68
Query: 183 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDPLEHP 241
+ LA ++ T + N + LAK+ K ++L S+ +YG +
Sbjct: 69 YVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRYILPSSCSIYGFQ-KGA 127
Query: 242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRV 301
ET NP+ + +E K E L + +R A ++ Y PRM D
Sbjct: 128 VDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG-YSPRMRFD--LA 181
Query: 302 VSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
++ V A + + + DG Q R +V D
Sbjct: 182 INGMVYGAWEDKCIPLMRDGTQYRPMVHVQD 212
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 60/227 (26%), Positives = 96/227 (42%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE-----LIRHDVVEPILL 179
AGFVG+H+ L RGD V+ +DNF D + R E ++ D+ + LL
Sbjct: 99 AGFVGTHVSAALKRRGDGVLGLDNF-NDYYDPSLKRARQALLERSGVFVVEGDINDAALL 157
Query: 180 ----EV---DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTST 230
EV + HLA A + NP + +N+ G +N+L + K + + S+
Sbjct: 158 KKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASS 217
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG + P E + P S Y K+ E + Y+ G+ + R F Y
Sbjct: 218 SSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 273
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVY---GDGKQTRSFQYVSDLV 334
GP D F ++ + ++++ G R F Y+ D+V
Sbjct: 274 GPWGRPDMAYFF--FTRDILKGKAISIFEGVNHGTVARDFTYIDDIV 318
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 60/227 (26%), Positives = 97/227 (42%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE-----LIRHDVVEPILL 179
+GFVG+H+ L RGD V+ +DNF D + R E ++ D+ + +LL
Sbjct: 104 SGFVGTHVSIALRRRGDGVLGLDNF-NRYYDPKLKRARQGLLERSGVFVVEGDINDAVLL 162
Query: 180 E--VD-----QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTST 230
D + HLA A + NP + +N+ G +N+L ++K + + S+
Sbjct: 163 RKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASS 222
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG + P E + P S Y K+ E + Y+ G+ + R F Y
Sbjct: 223 SSVYGLNSKVPFSEKDRTD-QPA---SLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVY 278
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGD---GKQTRSFQYVSDLV 334
GP D F ++ + +TV+ G R F Y+ D+V
Sbjct: 279 GPWGRPDMAYFF--FTKDILKGKTITVFESPDKGSVARDFTYIDDIV 323
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 49/182 (26%), Positives = 82/182 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKD---NLVHHF-RNPRFELIRHDVVEPILLE 180
AG++GSH +L+ V ++DN G L F + R + I D+ +P+ +E
Sbjct: 103 AGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVE 162
Query: 181 -------VDQIYHLACPASPVHYKYNPVK---TIKTNVMGTLNMLGLAKRVGAKFLLTST 230
D + H A A P+K I +N +G L +A+ K + +ST
Sbjct: 163 KIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLE--AMARHKVKKLIYSST 220
Query: 231 SEVYGDPLEHP-QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
YG+P + P ++T +NP Y + K+ AE + +D+ + + + V I R FN
Sbjct: 221 CATYGEPEKMPITEDTPQVPINP------YGKAKKMAEDMILDFSKNSDMAVMILRYFNV 274
Query: 290 YG 291
G
Sbjct: 275 IG 276
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 60/227 (26%), Positives = 96/227 (42%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFE-----LIRHDVVEPILL 179
AGFVG+H+ L RGD V+ +DNF D + R E ++ D+ + LL
Sbjct: 100 AGFVGTHVSAALKRRGDGVLGLDNF-NDYYDTSLKRSRQALLERSGVFIVEGDINDLSLL 158
Query: 180 ----EV---DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK--FLLTST 230
EV + HLA A + NP + +N+ G +N+L + K + + S+
Sbjct: 159 KKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASS 218
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG + P E + P S Y K+ E + Y+ G+ + R F Y
Sbjct: 219 SSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVY 274
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVY---GDGKQTRSFQYVSDLV 334
GP D F ++ + ++++ G R F Y+ D+V
Sbjct: 275 GPWGRPDMAYFF--FTRDILKGKAISIFEGANHGTVARDFTYIDDIV 319
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 140 (54.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 64/226 (28%), Positives = 103/226 (45%)
Query: 129 GSHLVDKLIDRGDEVIVI----DNFFTGRKDNLVH--HFRNPRFELIRHDVVEPILL--- 179
GS+L + L+ + EV + +F T R ++ H N R L D+ + ++L
Sbjct: 15 GSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYGDITDGLVLNKL 74
Query: 180 --EVD--QIYHLACPASPVHYKYN-PVKTIKTNVMGTLNMLGLAKRV-GAK---FLLTST 230
E+ ++Y+LA S V ++ PV T++T +GTLN+L K AK F S+
Sbjct: 75 IHEIKPHEVYNLAAQ-SHVRVSFDIPVYTMETIGLGTLNILEAIKNADNAKEIRFYQASS 133
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
SE+YGD PQ E+ P RS Y K A T++Y G+ +FN
Sbjct: 134 SEMYGDVKSVPQTES-----TPFNPRSPYACAKVFAHYQTINYRESYGLHASTGILFNHE 188
Query: 291 GPRMCLDD-GRVVSNFVAQAIRRQPMTVY-GDGKQTRSFQYVSDLV 334
PR R +++ +A+ + +Y G+ + R + Y D V
Sbjct: 189 SPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYV 234
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 140 (54.3 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 58/214 (27%), Positives = 95/214 (44%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQIY 185
GF+G H+V++L+ RG V V D G + V F +L + P L V ++
Sbjct: 30 GFLGQHMVEQLLARGYAVNVFD-IRQGFDNPRVQFFLG---DLCSQQDLYPALKGVSTVF 85
Query: 186 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GDPLEHPQ 242
H C ASP + N + N +GT N++ K G K +LTS++ V G +++
Sbjct: 86 H--C-ASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGT 142
Query: 243 KETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMCLDDGRV 301
++ + PI Y E K E + H + A R +GPR D ++
Sbjct: 143 EDLPYAT-KPI---DYYTETKILQERAVLGAHDPEKNFLTTAIRPHGIFGPR----DPQL 194
Query: 302 VSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
V + A + + + G+GK F +V ++VH
Sbjct: 195 VPILIEAAKKGKMKFMIGNGKNLVDFTFVENVVH 228
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 46/179 (25%), Positives = 78/179 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLV-------HHFRNPRFELIRHDVVEPI 177
AG++GSH V +LI+ G + +V DN D++ HH +L +E +
Sbjct: 20 AGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKV 79
Query: 178 LLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-AKFLLTSTSEVY 234
E +D + H A + P++ N++GT+ +L L ++ +KF+ +S++ VY
Sbjct: 80 FKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVY 139
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRG--AGVEVRIARIFNTYG 291
GD P P+G + Y K E + D + + I R FN G
Sbjct: 140 GDATRFPNMIPIPEEC-PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIG 197
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 46/191 (24%), Positives = 83/191 (43%)
Query: 159 HHFRNPRFELIRHDVVEPILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLG 216
HH +L +E + E +D + H A + P++ N++GT+ +L
Sbjct: 61 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLE 120
Query: 217 LAKRVG-AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHR 275
L ++ +KF+ +S++ VYGD P P+G + Y K E + D +
Sbjct: 121 LMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC-PLGPTNPYGHTKYAIENILNDLYN 179
Query: 276 G--AGVEVRIARIFNTYG--PRMCL-DDGRVVSN----FVAQ-AI-RRQPMTVYGDGKQT 324
+ I R FN G P + +D + N ++AQ A+ RR+ + ++GD +
Sbjct: 180 SDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS 239
Query: 325 RSFQYVSDLVH 335
R + D +H
Sbjct: 240 RDGTPIRDYIH 250
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 56/215 (26%), Positives = 98/215 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
+GF+G H+V++L++RG V V D G + V F +L + P L V +
Sbjct: 35 SGFLGQHMVEQLLERGYTVNVFD-IHQGFDNPRVQFFIG---DLCNQQDLYPALKGVSTV 90
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GDPLEHP 241
+H C ASP Y N + N +GT ++ + G K +LTS++ V G +++
Sbjct: 91 FH--C-ASPPPYSNNKELFYRVNFIGTKTVIETCREAGVQKLILTSSASVVFEGVDIKNG 147
Query: 242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMCLDDGR 300
++ + + PI Y E K E +D + + A R +GPR D +
Sbjct: 148 TEDLPYA-MKPI---DYYTETKILQERAVLDANDPKKNFLTAAIRPHGIFGPR----DPQ 199
Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
+V + A + + + G+G+ F +V ++VH
Sbjct: 200 LVPILIDAARKGKMKFMIGNGENLVDFTFVENVVH 234
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 60/231 (25%), Positives = 104/231 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVV-EPILLEVDQ 183
AG++GSH+V +L + ++V+V+DN G K + + R +LI D E +LLE+ +
Sbjct: 8 AGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAV-----DTRAKLIVGDFGDENLLLEIFK 62
Query: 184 IY------HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGD 236
Y H+A + P K + N+ TL++L + + K + +ST+ VYG+
Sbjct: 63 KYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSSTAAVYGE 122
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG--PRM 294
P + P E + P + Y K E Y + G R FN G P
Sbjct: 123 PEKWPITEDF-----PQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAGADPSG 177
Query: 295 CL-DDGRVVSNFVAQAIR-----RQPMTVYG------DGKQTRSFQYVSDL 333
+ +D ++ + + ++ +TV+G DG R + +V+DL
Sbjct: 178 DIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDL 228
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/160 (33%), Positives = 75/160 (46%)
Query: 148 NFFTGRKDNLVH--HFRNPRFELIRHDVVEP-----ILLEV--DQIYHLACPASPVHYKY 198
+F T R D++ H NP+F L D+ + IL EV D++Y+L S V +
Sbjct: 38 SFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGA-MSHVAVSF 96
Query: 199 -NPVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPI 253
+P T + MGTL +L + +G +F STSE+YG E PQKET P
Sbjct: 97 ESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPF 151
Query: 254 GERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
RS Y K A +T++Y G+ +FN PR
Sbjct: 152 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPR 191
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 59/220 (26%), Positives = 99/220 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL 179
+GF+G H+V++L++RG V N F R+ F NPR + D+ P L
Sbjct: 34 SGFLGQHMVEQLLERGYAV----NVFDKRQG-----FDNPRVQFFLGDLCNQQDLYPALK 84
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GD 236
V ++H C ASP N + N +GT N++ + G K +LTS++ V G
Sbjct: 85 GVSTVFH--C-ASPAPSSNNKELFYRVNYIGTKNVIETCREAGVQKLILTSSASVIFEGV 141
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMC 295
+++ ++ + + PI Y E K E + + + A R +GPR
Sbjct: 142 DIKNGTEDLPYA-MKPI---DYYTETKILQEKTVLGANDPDKNFLTTAIRPHGIFGPR-- 195
Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
D ++V + A + + V G+GK F +V ++VH
Sbjct: 196 --DPQLVPILIEAARKGKMKFVIGNGKNLVDFTFVENVVH 233
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKR----VGA------KFLLTSTS 231
D + HLA + P I+TN++GT +L +A++ +G +F ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134
Query: 232 EVYGDPLEHPQK-ET-----YWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
EVYGD L HP + E + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTN 193
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + A+ +P+ +YG G Q R + YV D
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 132 (51.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 58/215 (26%), Positives = 96/215 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
+GF+G H+V++L+ RG V V D G + V F +L + P L V+ +
Sbjct: 46 SGFLGQHMVEQLLARGYAVNVFD-IQQGFDNPQVRFFLG---DLCSRQDLYPALKGVNTV 101
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GDPLEHP 241
+H C ASP N + N +GT N++ K G K +LTS++ V G +++
Sbjct: 102 FH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNG 158
Query: 242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMCLDDGR 300
++ + + PI Y E K E + + + A R +GPR D +
Sbjct: 159 TEDLPYA-MKPI---DYYTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPR----DPQ 210
Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
+V + A + V G+GK F +V ++VH
Sbjct: 211 LVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVH 245
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 59/220 (26%), Positives = 100/220 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL 179
+GF+G H+V++L+ RG V N F R+ F NPR + D+ P L
Sbjct: 34 SGFLGQHMVEQLLARGYTV----NVFDMRQG-----FDNPRVQFFLGDLCSQQDLYPALK 84
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GD 236
V ++H C ASP N + N +GT N++ K G K +LTS++ V G
Sbjct: 85 GVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGV 141
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMC 295
+++ ++ + + PI Y E K E +D + + +A R +GPR
Sbjct: 142 NIKNGTEDLPYA-MKPI---DYYTETKILQERAVLDANDPKRNFLTMAIRPHGIFGPR-- 195
Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
D ++V + A + + + G+G+ F +V ++VH
Sbjct: 196 --DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVH 233
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/169 (27%), Positives = 75/169 (44%)
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNML--------GL--AKRVGAKFLLTS 229
++D + HLA + P I+TN++GT +L GL K+ +F S
Sbjct: 73 QLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHIS 132
Query: 230 TSEVYGDPLEHPQK----ETY--WGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRI 283
T EVYGD L HP + ET + S Y K +++ L + R G+ +
Sbjct: 133 TDEVYGD-LPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIV 191
Query: 284 ARIFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
+ N YGP + +++ + A+ + + +YG G Q R + YV D
Sbjct: 192 SNCSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVED 238
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 59/220 (26%), Positives = 100/220 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL 179
+GF+G H+V++L+ RG V N F R+ F NPR + D+ P L
Sbjct: 46 SGFLGQHMVEQLLARGYTV----NVFDMRQG-----FDNPRVQFFLGDLCSQQDLYPALK 96
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GD 236
V ++H C ASP N + N +GT N++ K G K +LTS++ V G
Sbjct: 97 GVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGV 153
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMC 295
+++ ++ + + PI Y E K E +D + + +A R +GPR
Sbjct: 154 NIKNGTEDLPYA-MKPI---DYYTETKILQERAVLDANDPKRNFLTMAIRPHGIFGPR-- 207
Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
D ++V + A + + + G+G+ F +V ++VH
Sbjct: 208 --DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVH 245
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 132 (51.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILL----- 179
+GF+G HLV++L+DRG V V D + + P + D+ + + L
Sbjct: 18 SGFLGRHLVERLVDRGYTVNVFD---------IRQAYELPGVTFYQGDLCDKLALVMALK 68
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GD 236
EV ++H C ASP + + N+ GT ++ G K +LTS++ V G
Sbjct: 69 EVSIVFH--C-ASPAPGSDDGALFQRVNIDGTRTVIQACHEAGVQKLILTSSASVVFEGT 125
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDY-HRGAGVEVRIARIFNTYGPRMC 295
+++ +++ + PI Y E K E L ++ + G R +GPR
Sbjct: 126 DIKNGKEDLPYAK-KPI---DYYTETKIKQEKLVLEACSKEKGFLTVAIRPHGIFGPR-- 179
Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
D ++V V A R + + GDG F YV ++VH
Sbjct: 180 --DPQLVPILVDTARRGKMKFIIGDGSNLVDFTYVENVVH 217
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 132 (51.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 58/215 (26%), Positives = 96/215 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVEPILLEVDQI 184
+GF+G H+V++L+ RG V V D G + V F +L + P L V+ +
Sbjct: 46 SGFLGQHMVEQLLARGYAVNVFD-IQQGFDNPQVRFFLG---DLCSRQDLYPALKGVNTV 101
Query: 185 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GDPLEHP 241
+H C ASP N + N +GT N++ K G K +LTS++ V G +++
Sbjct: 102 FH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNG 158
Query: 242 QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMCLDDGR 300
++ + + PI Y E K E + + + A R +GPR D +
Sbjct: 159 TEDLPYA-MKPI---DYYTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPR----DPQ 210
Query: 301 VVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
+V + A + V G+GK F +V ++VH
Sbjct: 211 LVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVH 245
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 131 (51.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 51/231 (22%), Positives = 103/231 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVE-----PI 177
AG++GSH +L++ ++IV+DN ++L V +FE + +V+ I
Sbjct: 9 AGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGKQFEFYKENVLNREKMNEI 68
Query: 178 LLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVY 234
LE ++ + H A + P+ N++ + + + ++ K F+ +S++ VY
Sbjct: 69 FLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFIFSSSATVY 128
Query: 235 GDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV-EVRIARIFNTYGP- 292
G P P E + P+ + Y + K E + D + + + R FN +G
Sbjct: 129 GIPKTLPITEEF-----PLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRYFNPFGAH 183
Query: 293 ---RMCLDDGRVVSN---FVAQ-AIRR-QPMTVYGDGKQTRSFQYVSDLVH 335
R+ D + +N +V Q A+ + + + ++G+ T+ V D +H
Sbjct: 184 QSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIH 234
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 165 RFELIRHDVVEPILLEV-DQIYHLACPAS-PVHYKYNPVKTIKTNVMGTLNMLGLAKRVG 222
R++L+ D + + E+ D + HLA P ++ +P +T++ N++GTLN+L K G
Sbjct: 37 RYDLLEPDSLGDLWPELPDAVIHLAGQTYVPEAFR-DPARTLQINLLGTLNLLQALKARG 95
Query: 223 --AKFLLTSTSEVYGDPLEH--PQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAG 278
FL S+ +VYG E P E + P R+ Y K AE+L + + G
Sbjct: 96 FSGTFLYISSGDVYGQVAEAALPIHE----ELIP-HPRNPYAVSKLAAESLCLQWGITEG 150
Query: 279 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQAIR-RQPMTV----YGDGKQTRSFQYVSDL 333
V +AR FN GP D V+++ Q R +Q + GD +R F V D+
Sbjct: 151 WRVLVARPFNHIGPGQ--KDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDV 208
Query: 334 V 334
+
Sbjct: 209 L 209
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 131 (51.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 46/149 (30%), Positives = 73/149 (48%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRN-PRFELIRHDVV---EPILLE 180
AG++GSH L+++G +V+++DN R + VH ++I H V EP L +
Sbjct: 15 AGYIGSHTCVVLLEKGYDVVIVDNLCNSRVE-AVHRIEKLTGKKVIFHQVDLLDEPALDK 73
Query: 181 V--DQ----IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEV 233
V +Q + H A + P+ K N+ GT+N++ K+ + F+ +S++ V
Sbjct: 74 VFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVFSSSATV 133
Query: 234 YGDPLEHPQKETYWGNVNPIGERSCYDEG 262
YGDP P G PI E SC EG
Sbjct: 134 YGDPTR-P------GGTIPIPE-SCPREG 154
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 52/180 (28%), Positives = 76/180 (42%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDN---LVHHFRNP-RFELIRHDV-----VE 175
AG++GSH +L+ V ++DN G L F P R + I D+ V
Sbjct: 79 AGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVN 138
Query: 176 PILLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TSTSE 232
I E D + H A A P+K TL +L G K L+ +ST
Sbjct: 139 KIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCA 198
Query: 233 VYGDPLEHP-QKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
YG+P P +ET +NP Y + K+ AE + +D+ + + + V I R FN G
Sbjct: 199 TYGEPDIMPITEETPQVPINP------YGKAKKMAEDIILDFSKNSDMAVMILRYFNVIG 252
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 131 (51.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 50/158 (31%), Positives = 71/158 (44%)
Query: 149 FFTGRKDNLVH--HFRNPRFELIRHDVVEP-----ILLEV--DQIYHLACPASPVHYKYN 199
F T R D+L H + F+L D+ + IL EV D++Y+L + +
Sbjct: 40 FNTQRVDHLYKDPHEEDVNFKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQS 99
Query: 200 PVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE 255
P T + +GTL +L + +G KF STSE+YG E PQKET P
Sbjct: 100 PEYTADVDAIGTLRLLEAIRFLGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYP 154
Query: 256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
RS Y K A +T++Y G+ +FN PR
Sbjct: 155 RSPYAVAKMYAYWITINYRESYGIYACNGILFNHESPR 192
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 131 (51.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 50/158 (31%), Positives = 71/158 (44%)
Query: 149 FFTGRKDNLVH--HFRNPRFELIRHDVVEP-----ILLEV--DQIYHLACPASPVHYKYN 199
F T R D+L H + F+L D+ + IL EV D++Y+L + +
Sbjct: 40 FNTQRVDHLYKDPHEEDVNFKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQS 99
Query: 200 PVKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE 255
P T + +GTL +L + +G KF STSE+YG E PQKET P
Sbjct: 100 PEYTADVDAIGTLRLLEAIRFLGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYP 154
Query: 256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
RS Y K A +T++Y G+ +FN PR
Sbjct: 155 RSPYAVAKMYAYWITINYRESYGIYACNGILFNHESPR 192
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 130 (50.8 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 59/220 (26%), Positives = 97/220 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL 179
+GF+G H+V++L+ RG V N F R+ F NPR + D+ P L
Sbjct: 35 SGFLGQHMVEQLLSRGYAV----NVFDVRQG-----FDNPRVQFFIGDLCNQQDLYPALK 85
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEVY--GD 236
V ++H C ASP N + N GT ++ K G K +LTS++ V G
Sbjct: 86 GVSTVFH--C-ASPPSNSNNKELFYRVNSTGTKTVIETCKEAGVQKLILTSSASVVFEGV 142
Query: 237 PLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPRMC 295
+++ ++ + + PI Y E K E +D + + A R +GPR
Sbjct: 143 DIKNGTEDLPYA-MKPI---DYYTETKILQERAVLDANDPKKNFLTAAIRPHGIFGPR-- 196
Query: 296 LDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
D ++V + A + + + G+GK F +V ++VH
Sbjct: 197 --DPQLVPVLIDAARKGKMKFMIGNGKNLVDFTFVENVVH 234
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 50/181 (27%), Positives = 78/181 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTG------RKDNLVHHFRNP----RFELIRHDVV 174
AG++GSH V +L++ G +V+DN+ R L N + +L +
Sbjct: 11 AGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDLRDRPAL 70
Query: 175 EPILLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232
E I E D + H A + P+ N++GT+ +L + + G K L+ S+S
Sbjct: 71 EKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNLVFSSSA 130
Query: 233 -VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV-EVRIARIFNTY 290
VYG P E P E +PI + Y K E + D HR ++ + R FN
Sbjct: 131 TVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV 185
Query: 291 G 291
G
Sbjct: 186 G 186
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 51/175 (29%), Positives = 79/175 (45%)
Query: 174 VEPILLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTS 231
+E I E D + H A + P+ N++GT+ +L + + G K L+ S+S
Sbjct: 70 LEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNLVFSSS 129
Query: 232 E-VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGV-EVRIARIFNT 289
VYG P E P E +PI + Y K E + D HR ++ + R FN
Sbjct: 130 ATVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP 184
Query: 290 YG--PRMCL-DDGRVVSN----FVAQ-AIRRQP-MTVYGDGKQTRSFQYVSDLVH 335
G P + +D V N +V Q A+ R+P +TV+G +T+ V D +H
Sbjct: 185 VGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIH 239
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 122 (48.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 180 EVDQIYHLA--CPASPVHYKY-NPVKTIKTNVMGTLNMLGLAK-RVGAK--------FLL 227
E+++I H+ S V + +P+ K N++ T N+L + +G K F+
Sbjct: 87 EINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVH 146
Query: 228 TSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
ST EVYG+ E+ + +NP S Y K + + Y + V + R
Sbjct: 147 VSTDEVYGEQDENASVDEK-SKLNPT---SPYAASKAAVDLIIQSYRYSYKISVTVIRAN 202
Query: 288 NTYGPR--------MCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLVH 335
N YGPR M L + N +Q I + +T++GDG R + ++ D ++
Sbjct: 203 NVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKYLHIYDFIN 258
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 125 AGFVGSHLVDKLIDR 139
AGF+GS+ +D +D+
Sbjct: 18 AGFIGSNFLDYAVDK 32
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----------KRVGAKFLLTSTS 231
D + HLA + P I+TN++GT +L A K+ +F ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHISTD 134
Query: 232 EVYGDPLEHPQKET------YWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
EVYGD L HP + + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTN 193
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + A+ + + +YG G Q R + YV D
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVED 238
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 182 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLA----------KRVGAKFLLTSTS 231
D + HLA + P I+TN++GT +L A K+ +F ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTD 134
Query: 232 EVYGDPLEHPQKET------YWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
EVYGD L HP + + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTN 193
Query: 286 IFNTYGPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSD 332
N YGP + +++ + A+ + + +YG G Q R + YV D
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVED 238
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 98 (39.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 39/149 (26%), Positives = 67/149 (44%)
Query: 200 PVKTIKTNVMGTLNMLGLAKRVGAK-FLLTSTSEVYGDPLEHP--QKETYWGNVNPIGER 256
P++ N+ GT+ +L + + + +S++ VYGDP P +K G NP
Sbjct: 105 PLEYYNVNLTGTIRLLEAMEAYSVRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNP---- 160
Query: 257 SCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPR---MCLDDGRVVSN----FVAQ 308
Y + K E + D + G + R FN G M +D + + N +VAQ
Sbjct: 161 --YGKSKYFIEEMIQDLCKAEKGWNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQ 218
Query: 309 -AIRRQP-MTVYGDGKQTRSFQYVSDLVH 335
A+ RQ ++V+G+ +T + D +H
Sbjct: 219 VAVGRQEFLSVFGNDYETADGTGIRDYIH 247
Score = 67 (28.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDN 148
AG++GSH V +L + G E +VIDN
Sbjct: 15 AGYIGSHCVLQLAEAGYEPVVIDN 38
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 123 (48.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 57/224 (25%), Positives = 97/224 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDN---FFT-----GRKDNL--VHHFRNPRFELIRHDVV 174
AGF+G+++ +L G EV+ IDN ++ R L + +F + +L + +
Sbjct: 9 AGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLADREGI 68
Query: 175 EPILLE--VDQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TST 230
+ + ++ HLA A V Y NP+ +N++G L +L + + L+ S+
Sbjct: 69 AKLFAQQGFQRVIHLAAQAG-VRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHLVYASS 127
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG + P T +PI S Y K+ E ++ Y + R F Y
Sbjct: 128 SSVYGLNQKMPFS-TEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPTTGLRFFTVY 183
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
GP D + F + + + VY G +R F Y+ D+V
Sbjct: 184 GPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIV 225
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 123 (48.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 57/224 (25%), Positives = 97/224 (43%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDN---FFT-----GRKDNL--VHHFRNPRFELIRHDVV 174
AGF+G+++ +L G EV+ IDN ++ R L + +F + +L + +
Sbjct: 9 AGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLADREGI 68
Query: 175 EPILLE--VDQIYHLACPASPVHYKY-NPVKTIKTNVMGTLNMLGLAKRVGAKFLL-TST 230
+ + ++ HLA A V Y NP+ +N++G L +L + + L+ S+
Sbjct: 69 AKLFAQQGFQRVIHLAAQAG-VRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHLVYASS 127
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
S VYG + P T +PI S Y K+ E ++ Y + R F Y
Sbjct: 128 SSVYGLNQKMPFS-TEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPTTGLRFFTVY 183
Query: 291 GPRMCLDDGRVVSNFVAQAIRRQPMTVYGDGKQTRSFQYVSDLV 334
GP D + F + + + VY G +R F Y+ D+V
Sbjct: 184 GPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIV 225
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 54/183 (29%), Positives = 81/183 (44%)
Query: 167 ELIRHDVVEPILLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAK 224
+L +E I E D + H A + P+ N++GT+ +L + + G K
Sbjct: 64 DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCK 123
Query: 225 FLLTSTSE-VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRI 283
L+ S+S VYG P E P E + PI + Y K E + D + G+ E +I
Sbjct: 124 NLVFSSSATVYGSPKEVPCTEEF-----PISALNPYGRTKLFIEEICRDVY-GSDPEWKI 177
Query: 284 A--RIFNTYGPRMCLD---DGRVVSN----FVAQ-AIRRQP-MTVYGDGKQTRSFQYVSD 332
R FN G D D R + N FV Q A+ R+P +TV+G+ T+ V D
Sbjct: 178 ILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRD 237
Query: 333 LVH 335
+H
Sbjct: 238 YIH 240
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 54/190 (28%), Positives = 80/190 (42%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNL-------VHHFRNPRF---ELIRHDVV 174
AG++GSH V +L+ G V+V+DN +L H F +L +
Sbjct: 12 AGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDLRDRSAL 71
Query: 175 EPILLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232
E I E D + H A + P+ N++GT+ +L + + G K L+ S+S
Sbjct: 72 EKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNLVFSSSA 131
Query: 233 -VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA--RIFNT 289
VYG P E P E + PI + Y K E + D + G+ E +I R FN
Sbjct: 132 TVYGSPKEVPCTEEF-----PISALNPYGRTKLFIEEICRDVY-GSDPEWKIILLRYFNP 185
Query: 290 YGPRMCLDDG 299
G D G
Sbjct: 186 VGAHPSGDIG 195
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 122 (48.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 57/233 (24%), Positives = 100/233 (42%)
Query: 126 GFVGSHLVDKLID--RGDEVIVIDNFFTGRKDNL--VHHFRNPRFELIRHDVVEPILLE- 180
G++GSH V +L+ + E++++DN L + N I+ DV + LE
Sbjct: 10 GYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKADVCDENALEQ 69
Query: 181 ------VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE-V 233
++ + H A + P+ + NV GT+ +L + + K L+ S+S V
Sbjct: 70 VFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKNLVFSSSATV 129
Query: 234 YGDPLEHPQKETYWGNV-NPIGERSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYG 291
YG+ + P ET + NP G+ K E + D + A + R FN G
Sbjct: 130 YGNNVS-PLNETMATSATNPYGQT------KLMVEHVLFDLAKSDASWSIACLRYFNPIG 182
Query: 292 PR---MCLDDGRVVSN----FVAQ-AIRR-QPMTVYGDGKQTRSFQYVSDLVH 335
+ ++ + N +VAQ A+ R + + ++GD T+ V D +H
Sbjct: 183 AHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIH 235
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 121 (47.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 60/228 (26%), Positives = 103/228 (45%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNF---FTGRKDNLVH--HFRNP-RF--ELIRHDVV-E 175
AGF+GS L L ++ E+++ID T NL HF+N F EL D+ E
Sbjct: 9 AGFIGSQLALNLQEK-HEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGELFAGDINDE 67
Query: 176 PILLEVDQ-----IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
+L +++ I+H A + ++ K ++TN+ + + L+ + AK + S+
Sbjct: 68 KVLKKIEDFKPEIIFHQAAISDTT--VFDQTKVLQTNLNTFKDFIELSIDLNAKLIYASS 125
Query: 231 SEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
+ VYGD + PQ T + P ++ Y K + L Y+ A + V + R FN Y
Sbjct: 126 ASVYGDA-KSPQ--TVGKDEEP---KNPYAFSKLMMDKLAKKYYDKAHL-VGL-RYFNVY 177
Query: 291 GPRMCLDD--GRVVSNFVAQAIR-RQPMTVYGDGKQTRSFQYVSDLVH 335
G + +V F Q + + P G + R F Y+ D+++
Sbjct: 178 GKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVIN 225
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 48/157 (30%), Positives = 72/157 (45%)
Query: 151 TGRKDNLV--HHFRNPRFELIRHDVVEP-----ILLEV--DQIYHLACPASPVHYKYN-P 200
T R D++ +H +N +F L D+ + IL +V D++Y+L S V + P
Sbjct: 43 TERIDHIYQDNHEKNQKFFLHYGDLTDSSNLTRILKDVQPDEVYNLGAQ-SHVAVSFECP 101
Query: 201 VKTIKTNVMGTLNMLGLAKRVG----AKFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER 256
T + +GTL +L + +G KF STSE+YG+ E PQ ET P R
Sbjct: 102 EYTADVDAIGTLRLLEAIRFLGLEKKTKFYQASTSELYGEVQEIPQSET-----TPFHPR 156
Query: 257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
S Y K A + ++Y G+ +FN PR
Sbjct: 157 SPYAVAKMYAYWIVVNYRESYGMYACNGILFNHESPR 193
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 53/181 (29%), Positives = 83/181 (45%)
Query: 129 GSHLVDKLIDRGDEV--IV--IDNFFTGRKDNLVHHFRNPRFELIRH--DVVE-----PI 177
GS+L + L+ +G EV ++ F T R D+L P L H D+++ +
Sbjct: 14 GSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYGDLIDGTRLVTL 73
Query: 178 L--LEVDQIYHLACPASPVHYKYN-PVKTIKTNVMGTLNMLGLAK--RVGAKFLLTSTSE 232
L +E D++Y+LA S V ++ PV T T MG++ +L + RV +F S+SE
Sbjct: 74 LSTIEPDEVYNLAAQ-SHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRVHCRFYQASSSE 132
Query: 233 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
++G PQ E + P RS Y K + T +Y G+ +FN P
Sbjct: 133 MFGAS-PPPQNE-----LTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVNGILFNHESP 186
Query: 293 R 293
R
Sbjct: 187 R 187
>UNIPROTKB|K7GMD9 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 EMBL:CU468868
Ensembl:ENSSSCT00000033816 Uniprot:K7GMD9
Length = 215
Score = 112 (44.5 bits), Expect = 0.00031, P = 0.00031
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVHHFRNPRFELIRHDVVE-----PILL 179
+GF+G H+V++L++RG V N F R+ F NPR + D+ P L
Sbjct: 34 SGFLGQHMVEQLLERGYAV----NVFDKRQG-----FDNPRVQFFLGDLCNQQDLYPALK 84
Query: 180 EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-KFLLTSTSEV 233
V ++H C ASP N + N +GT N++ + G K +LTS++ V
Sbjct: 85 GVSTVFH--C-ASPAPSSNNKELFYRVNYIGTKNVIETCREAGVQKLILTSSASV 136
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 126 GFVGSHLVDKLIDRGDEVIVIDNFFT---GRKD---NL--VHHFRNPRFELIRHDVVE-P 176
G++GSH V +LI+ G +VIDNF G D +L + F + + E D+++ P
Sbjct: 12 GYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQIEFHELDLLDKP 71
Query: 177 ILLEVDQIY------HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTST 230
L ++ +++ H A + P++ + N+ GT+N+L + + G + L+ S+
Sbjct: 72 GLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHGVRNLVFSS 131
Query: 231 SE-VYGDPLEHPQKETY 246
S VYGDP + P E +
Sbjct: 132 SATVYGDPQKLPIDEQH 148
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 116 (45.9 bits), Expect = 0.00092, P = 0.00092
Identities = 46/179 (25%), Positives = 79/179 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH-HF----RNPRFEL-IR-HDVVEPI 177
AG++GSH V +LI G +V+++DN D + F P +++ IR ++ + +
Sbjct: 12 AGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNYEQLNKV 71
Query: 178 LLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE-VY 234
+ + + H A + P+ NV GT+N+L + K K ++ S+S VY
Sbjct: 72 FQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTIVFSSSATVY 131
Query: 235 GDPLEHPQKETYWGNVN-PIGERSCYDEGKRTAETLTMD-YHRGAGVEVRIARIFNTYG 291
GD + P+ + Y K E++ D Y+ +V I R FN G
Sbjct: 132 GDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRYFNPIG 190
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 116 (45.9 bits), Expect = 0.00092, P = 0.00092
Identities = 46/179 (25%), Positives = 79/179 (44%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGRKDNLVH-HF----RNPRFEL-IR-HDVVEPI 177
AG++GSH V +LI G +V+++DN D + F P +++ IR ++ + +
Sbjct: 12 AGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNYEQLNKV 71
Query: 178 LLE--VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE-VY 234
+ + + H A + P+ NV GT+N+L + K K ++ S+S VY
Sbjct: 72 FQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTIVFSSSATVY 131
Query: 235 GDPLEHPQKETYWGNVN-PIGERSCYDEGKRTAETLTMD-YHRGAGVEVRIARIFNTYG 291
GD + P+ + Y K E++ D Y+ +V I R FN G
Sbjct: 132 GDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRYFNPIG 190
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 112 (44.5 bits), Expect = 0.00096, P = 0.00096
Identities = 53/182 (29%), Positives = 76/182 (41%)
Query: 125 AGFVGSHLVDKLIDRGDEVIVIDNFFTGR-------KDNLVHHFRN---PRFELIRHDVV 174
AG++GSH V +L+ G +VIDN KD H +N + +L +
Sbjct: 11 AGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDLRDKPAL 70
Query: 175 EPILLEV--DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGAKFLLTSTSE 232
E + E D + H A + P+ N++ T+ +L + G K L+ S+S
Sbjct: 71 EKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKLVFSSSA 130
Query: 233 -VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLTMDYHRGAGVEVRIA--RIFNT 289
VYG P E P E +P+ S Y K E + D RG E RI R FN
Sbjct: 131 TVYGWPKEVPCTEE-----SPLSGMSPYGRTKLFIEDICRDVQRG-DPEWRIIMLRYFNP 184
Query: 290 YG 291
G
Sbjct: 185 VG 186
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 335 315 0.00082 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 137
No. of states in DFA: 603 (64 KB)
Total size of DFA: 209 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.07u 0.08s 23.15t Elapsed: 00:00:02
Total cpu time: 23.09u 0.08s 23.17t Elapsed: 00:00:02
Start: Fri May 10 07:32:28 2013 End: Fri May 10 07:32:30 2013
WARNINGS ISSUED: 1