BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019797
(335 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15283|RASA2_HUMAN Ras GTPase-activating protein 2 OS=Homo sapiens GN=RASA2 PE=2 SV=2
Length = 849
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 8 EGWMVR--YGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN--QVPIKTLL 54
EG M + GR +IG+ R+F L SR L Y+K+ +D +P+K +L
Sbjct: 608 EGEMYKRAQGRTRIGKKNFKKRWFCLTSRELTYHKQPGKDAIYTIPVKNIL 658
>sp|Q58445|RPOA1_METJA DNA-directed RNA polymerase subunit A' OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rpoA1 PE=3 SV=2
Length = 1341
Score = 33.5 bits (75), Expect = 2.5, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 32 ESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITM 91
E R + K+ ++ + +K + +GN R + G KT VYV S+YN KE + RI
Sbjct: 767 EDRFIKDIKEMLKEFGIELKVRVEEGNLRKD--GYKTK----VYVASIYNHKEFFGRIGY 820
Query: 92 AAFNIQEA--------LIWKEKIELVIDQHQESQVSNGNKYVSFE 128
N +E L+ KEK + ++ N K+++F+
Sbjct: 821 TYANKKETLARYAYEYLLTKEK---YLKDRNIKKLENNTKFITFD 862
>sp|P58069|RASA2_MOUSE Ras GTPase-activating protein 2 OS=Mus musculus GN=Rasa2 PE=1 SV=1
Length = 848
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 8 EGWMVR--YGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN--QVPIKTLL 54
EG M + GR +IG+ R+F L SR L Y++++ +D +P+K +L
Sbjct: 608 EGEMYKRAQGRTRIGKKNFKKRWFCLTSRELTYHRQQGKDAIYTIPVKNIL 658
>sp|Q63713|RASA2_RAT Ras GTPase-activating protein 2 OS=Rattus norvegicus GN=Rasa2 PE=2
SV=1
Length = 847
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 8 EGWMVR--YGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN--QVPIKTLL 54
EG M + GR +IG+ R+F L S+ L Y+K++ +D +P+K +L
Sbjct: 607 EGEMYKRAQGRTRIGKKNFKKRWFCLTSKELTYHKQQGKDAIYTIPVKNIL 657
>sp|Q05123|ARP9_YEAST Actin-like protein ARP9 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARP9 PE=1 SV=1
Length = 467
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 58 NCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQESQ 117
NC + D G THH ++ ++ I M +I ++L + ++ Q + Q
Sbjct: 158 NCCIIDVG--THHTDIIPIVDYAQLDHLVSSIPMGGQSINDSL------KKLLPQWDDDQ 209
Query: 118 VSNGNKYVSFEYKSGMDNGRNGSSSDHESQFSAQEDEDDGHLNLMRRTTIG 168
+ + K FE S D+ + SS D ++ EDED+G LN+ T G
Sbjct: 210 IESLKKSPIFEVLS--DDAKKLSSFDFGNE---NEDEDEGTLNVAEIITSG 255
>sp|Q557G1|IRLB_DICDI Probable serine/threonine-protein kinase irlB OS=Dictyostelium
discoideum GN=irlB-1 PE=3 SV=1
Length = 1448
Score = 32.0 bits (71), Expect = 6.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 190 NINNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELVMS 249
++NN+ + R + C NG+ E+L DY+ R S + VG++E+ C ++F +
Sbjct: 177 HLNNEVYKR-----IVC-NGVWKSEKL---DYIYRYKSDQLSLVGIIESDCSDLFISTLL 227
Query: 250 MDGTRYE 256
+D YE
Sbjct: 228 IDSNSYE 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,308,122
Number of Sequences: 539616
Number of extensions: 5551756
Number of successful extensions: 13455
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 13450
Number of HSP's gapped (non-prelim): 15
length of query: 335
length of database: 191,569,459
effective HSP length: 118
effective length of query: 217
effective length of database: 127,894,771
effective search space: 27753165307
effective search space used: 27753165307
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)