Query 019797
Match_columns 335
No_of_seqs 91 out of 93
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 07:15:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019797.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019797hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r55_A STAR-related lipid tran 99.9 9.5E-23 3.3E-27 182.4 13.7 120 199-325 43-164 (231)
2 3fo5_A Thioesterase, adipose a 99.9 5.1E-23 1.7E-27 192.1 12.0 145 170-325 36-184 (258)
3 1jss_A Stard4, cholesterol-reg 99.9 4.6E-22 1.6E-26 178.5 13.0 118 198-323 42-159 (224)
4 3p0l_A Steroidogenic acute reg 99.8 4.5E-21 1.5E-25 171.1 12.3 119 198-325 30-150 (221)
5 1em2_A MLN64 protein; beta bar 99.8 6.9E-21 2.4E-25 170.4 11.6 119 198-325 41-161 (229)
6 2pso_A STAR-related lipid tran 99.8 1.2E-20 4.2E-25 172.3 12.4 118 197-324 48-166 (237)
7 2e3n_A Lipid-transfer protein 99.8 1.1E-19 3.8E-24 165.3 13.9 125 194-326 42-174 (255)
8 3qsz_A STAR-related lipid tran 99.8 4.1E-19 1.4E-23 153.8 14.6 118 198-326 2-119 (189)
9 1ln1_A PC-TP, phosphatidylchol 99.8 3E-19 1E-23 156.8 12.3 118 197-325 26-147 (214)
10 2w2x_D 1-phosphatidylinositol- 99.7 2.1E-16 7.3E-21 130.1 11.7 102 4-111 11-119 (124)
11 1wi1_A Calcium-dependent activ 99.6 1.6E-15 5.4E-20 129.1 11.6 99 5-113 8-112 (126)
12 1v88_A Oxysterol binding prote 99.6 2.1E-15 7.2E-20 126.7 11.3 99 3-112 6-125 (130)
13 1pls_A Pleckstrin homology dom 99.6 6.8E-15 2.3E-19 116.7 12.6 105 1-115 1-105 (113)
14 1fgy_A GRP1; PH domain, signal 99.6 7.2E-15 2.5E-19 117.7 12.4 101 3-113 3-122 (127)
15 1u5d_A SKAP55, SRC kinase-asso 99.6 1.1E-14 3.9E-19 112.9 12.2 104 4-112 2-106 (108)
16 4a6h_A Phosphatidylinositol 4, 99.6 9.5E-15 3.2E-19 121.6 12.2 101 5-109 6-116 (120)
17 2dn6_A KIAA0640 protein; PH do 99.6 9.6E-15 3.3E-19 115.3 11.4 103 3-116 6-108 (115)
18 2rsg_A Collagen type IV alpha- 99.6 4E-15 1.4E-19 115.0 8.5 92 5-109 1-92 (94)
19 1v89_A Hypothetical protein KI 99.6 1.5E-14 5.2E-19 114.1 11.4 102 3-111 6-112 (118)
20 1wgq_A FYVE, rhogef and PH dom 99.6 2.2E-14 7.6E-19 113.3 12.3 97 3-110 6-102 (109)
21 2d9x_A Oxysterol binding prote 99.6 1.4E-14 4.8E-19 117.0 11.2 103 2-116 5-109 (120)
22 3rcp_A Pleckstrin homology dom 99.6 1.1E-14 3.6E-19 113.8 9.5 94 7-112 1-94 (103)
23 2cod_A Centaurin-delta 1; ARF 99.6 1.4E-14 4.8E-19 115.5 10.4 97 2-113 5-101 (115)
24 1wg7_A Dedicator of cytokinesi 99.6 1.8E-14 6.1E-19 120.1 10.6 106 3-116 16-129 (150)
25 2yry_A Pleckstrin homology dom 99.5 2.5E-14 8.7E-19 114.3 10.7 99 5-111 22-120 (122)
26 1fao_A Dual adaptor of phospho 99.5 3.8E-14 1.3E-18 114.3 11.7 100 3-114 16-115 (126)
27 2y7b_A Actin-binding protein a 99.5 8.5E-15 2.9E-19 119.1 7.9 107 2-113 2-130 (134)
28 2cof_A Protein KIAA1914; PH do 99.5 2E-14 6.7E-19 114.0 9.7 96 3-111 6-101 (107)
29 2i5f_A Pleckstrin; PH domain, 99.5 4.2E-14 1.4E-18 110.6 11.3 100 3-110 5-108 (109)
30 1v5p_A Pleckstrin homology dom 99.5 2.9E-14 9.8E-19 119.0 10.2 100 5-111 15-120 (126)
31 2dkp_A Pleckstrin homology dom 99.5 4.1E-14 1.4E-18 113.9 10.7 99 4-110 20-118 (128)
32 1unq_A RAC-alpha serine/threon 99.5 3.3E-14 1.1E-18 114.8 10.0 105 3-116 6-115 (125)
33 2d9y_A Pleckstrin homology dom 99.5 6.9E-14 2.4E-18 110.7 11.1 101 4-112 10-110 (117)
34 1eaz_A Tandem PH domain contai 99.5 5.6E-14 1.9E-18 112.4 10.7 103 3-114 12-114 (125)
35 2dhk_A TBC1 domain family memb 99.5 8.2E-14 2.8E-18 112.8 11.6 101 3-115 6-108 (119)
36 1x05_A Pleckstrin; PH domain, 99.5 6.2E-14 2.1E-18 113.5 10.7 102 3-112 16-121 (129)
37 1dyn_A Dynamin; signal transdu 99.5 9E-14 3.1E-18 118.4 12.0 98 4-109 11-115 (125)
38 1upq_A PEPP1; PH domain, phosp 99.5 9.1E-14 3.1E-18 111.2 11.2 100 4-111 10-109 (123)
39 1u5f_A SRC-associated adaptor 99.5 8.7E-14 3E-18 116.1 11.5 107 4-115 16-123 (148)
40 1v5u_A SBF1, SET binding facto 99.5 3E-14 1E-18 112.8 8.3 101 3-112 6-112 (117)
41 2lul_A Tyrosine-protein kinase 99.5 1.9E-13 6.7E-18 117.9 11.9 108 2-113 12-123 (164)
42 2da0_A 130-kDa phosphatidylino 99.5 2.4E-13 8.2E-18 109.1 11.5 97 4-115 9-105 (114)
43 1x1g_A Pleckstrin 2; PH domain 99.5 9.2E-14 3.1E-18 112.3 8.1 102 4-112 17-125 (129)
44 1x1f_A Signal-transducing adap 99.5 2E-13 6.8E-18 117.7 10.6 98 4-112 17-114 (149)
45 2p0d_A RHO GTPase-activating p 99.5 3.6E-13 1.2E-17 111.7 11.7 104 3-113 10-126 (129)
46 1btk_A Bruton'S tyrosine kinas 99.5 2.2E-13 7.4E-18 118.7 10.8 104 4-111 2-132 (169)
47 3aj4_A Pleckstrin homology dom 99.5 1.5E-13 5.2E-18 108.7 8.9 101 2-110 2-110 (112)
48 1btn_A Beta-spectrin; signal t 99.5 2.1E-13 7.3E-18 106.1 9.5 97 7-109 1-106 (106)
49 2coc_A FYVE, rhogef and PH dom 99.5 2.7E-13 9.1E-18 111.8 10.4 95 2-109 5-104 (112)
50 3cxb_B Pleckstrin homology dom 99.4 4.5E-13 1.5E-17 108.4 10.7 97 7-112 2-102 (112)
51 1wjm_A Beta-spectrin III; PH d 99.4 2.1E-13 7.2E-18 110.3 8.6 105 3-113 6-119 (123)
52 2d9v_A Pleckstrin homology dom 99.4 1.2E-12 4.2E-17 107.8 12.2 102 2-111 5-114 (130)
53 2dtc_A RAL guanine nucleotide 99.4 5.8E-13 2E-17 113.0 10.5 101 6-113 2-114 (126)
54 2j59_M RHO-GTPase activating p 99.4 6.1E-13 2.1E-17 113.2 9.5 105 4-114 2-114 (168)
55 1u5e_A SRC-associated adaptor 99.4 2.1E-12 7.1E-17 116.3 11.6 103 5-112 106-209 (211)
56 2fjl_A 1-phosphatidylinositol- 99.4 2.7E-12 9.4E-17 112.2 11.2 98 6-110 2-147 (150)
57 3tfm_A Myosin X; split PH doma 99.3 3.1E-12 1.1E-16 115.8 10.6 99 3-112 56-156 (228)
58 3a8p_A T-lymphoma invasion and 99.3 9.2E-12 3.1E-16 115.9 12.2 105 3-113 9-126 (263)
59 2ys3_A UNC-112-related protein 99.3 5.4E-12 1.8E-16 108.9 9.5 103 3-109 7-110 (137)
60 1dro_A Beta-spectrin; cytoskel 99.3 2E-12 6.9E-17 105.0 6.4 104 3-112 6-120 (122)
61 3pp2_A RHO GTPase-activating p 99.3 3.4E-11 1.2E-15 99.1 11.9 105 3-112 6-124 (124)
62 3tca_A Amyloid beta A4 precurs 99.3 1.2E-11 4.2E-16 112.5 10.1 103 4-110 167-275 (291)
63 2r09_A Cytohesin-3; autoinhibi 99.3 2E-11 6.7E-16 117.2 11.3 99 5-113 213-330 (347)
64 3lju_X ARF-GAP with dual PH do 99.2 3.2E-11 1.1E-15 117.7 11.0 103 3-113 267-374 (386)
65 4h8s_A DCC-interacting protein 99.2 1.8E-11 6.3E-16 118.5 9.0 102 3-113 299-400 (407)
66 2rlo_A Centaurin-gamma 1; spli 99.2 3.3E-11 1.1E-15 98.5 9.2 105 3-112 2-125 (128)
67 2q13_A DCC-interacting protein 99.2 3.5E-11 1.2E-15 115.7 9.8 101 4-113 277-377 (385)
68 1qqg_A IRS-1, insulin receptor 99.2 3.4E-11 1.2E-15 112.2 7.6 97 3-113 8-114 (264)
69 3lju_X ARF-GAP with dual PH do 99.1 1.1E-10 3.8E-15 113.9 7.5 98 5-111 146-246 (386)
70 2rov_A RHO-associated protein 99.0 8.5E-10 2.9E-14 91.3 7.5 104 6-111 2-115 (117)
71 4gmv_A RAS-associated and plec 98.8 7E-09 2.4E-13 98.4 9.0 103 3-110 156-265 (281)
72 3a8n_A TIAM-1, T-lymphoma inva 98.8 4.2E-09 1.4E-13 99.8 7.5 105 2-112 8-125 (279)
73 4f7h_A Fermitin family homolog 98.8 5.2E-08 1.8E-12 86.8 12.2 103 3-109 45-148 (173)
74 2d9w_A Docking protein 2; PH d 98.8 6.7E-08 2.3E-12 82.5 12.3 104 1-109 8-119 (127)
75 4ejn_A RAC-alpha serine/threon 98.7 1.5E-08 5E-13 97.3 8.0 103 2-113 3-110 (446)
76 3hk0_A Growth factor receptor- 98.6 2E-07 6.9E-12 87.2 12.2 103 3-110 130-239 (256)
77 4bbk_A Kindlin-1, fermitin fam 98.5 6.8E-07 2.3E-11 79.1 11.6 103 3-109 24-127 (165)
78 2d9z_A Protein kinase C, NU ty 98.1 2.4E-05 8.2E-10 66.9 10.4 101 2-110 5-122 (129)
79 2coa_A Protein kinase C, D2 ty 98.0 3.6E-05 1.2E-09 65.5 10.6 101 2-110 5-118 (125)
80 1w1g_A HPDK1, 3-phosphoinositi 97.6 0.00019 6.6E-09 62.7 9.1 89 5-112 52-140 (151)
81 3qwm_A Iqsec1, IQ motif and SE 97.5 0.00045 1.5E-08 59.7 9.8 90 19-116 31-127 (140)
82 1v61_A RAC/CDC42 guanine nucle 97.2 0.00097 3.3E-08 56.7 7.8 77 24-111 44-126 (132)
83 1mai_A Phospholipase C delta-1 96.6 0.0043 1.5E-07 51.5 6.9 97 9-112 17-122 (131)
84 3mpx_A FYVE, rhogef and PH dom 96.4 0.0062 2.1E-07 58.6 7.7 95 6-113 245-339 (434)
85 3tfm_A Myosin X; split PH doma 96.1 0.0063 2.2E-07 54.6 5.4 46 3-55 19-64 (228)
86 2pz1_A RHO guanine nucleotide 95.9 0.094 3.2E-06 51.1 13.1 105 7-116 336-445 (466)
87 2dfk_A Collybistin II; DH doma 95.5 0.13 4.4E-06 49.5 12.3 105 7-116 259-368 (402)
88 3ky9_A Proto-oncogene VAV; cal 95.5 0.066 2.3E-06 54.1 10.7 102 7-114 408-510 (587)
89 3zvr_A Dynamin-1; hydrolase, D 95.5 0.057 1.9E-06 57.5 10.6 96 5-109 540-643 (772)
90 3odw_A RHO guanine nucleotide 95.4 0.064 2.2E-06 54.0 10.0 99 6-114 413-527 (536)
91 3p6a_A RHO guanine nucleotide 95.3 0.1 3.6E-06 48.9 10.7 97 6-112 260-372 (377)
92 1kz7_A Guanine nucleotide exch 95.2 0.15 5.2E-06 48.0 11.6 104 7-116 212-330 (353)
93 2vrw_B P95VAV, VAV1, proto-onc 95.1 0.19 6.4E-06 48.1 12.0 102 7-114 236-338 (406)
94 1dbh_A Protein (human SOS 1); 94.3 0.18 6E-06 47.2 9.2 90 7-109 249-347 (354)
95 1xcg_A PDZ-rhogef, RHO guanine 94.1 0.38 1.3E-05 45.1 11.1 96 7-112 255-367 (368)
96 1txd_A RHO guanine nucleotide 94.0 0.47 1.6E-05 44.9 11.6 100 7-116 259-374 (385)
97 2lg1_A A-kinase anchor protein 93.5 0.45 1.5E-05 41.8 9.9 96 6-113 72-174 (185)
98 2z0q_A XPLN, RHO guanine nucle 92.4 0.19 6.5E-06 46.8 6.2 96 7-111 234-346 (346)
99 1zc3_B Exocyst complex protein 92.2 2.7 9.1E-05 34.0 12.1 97 6-113 9-109 (113)
100 1nty_A Triple functional domai 92.2 1.1 3.7E-05 41.2 10.9 84 25-113 222-310 (311)
101 3t06_A PDZ-rhogef, RHO guanine 92.0 1.2 4.1E-05 42.5 11.3 96 6-112 296-409 (418)
102 3ml4_A Protein DOK-7; tyrosine 91.8 1.1 3.6E-05 41.5 10.2 102 1-113 5-115 (224)
103 3jzy_A Intersectin 2; C2 domai 91.6 0.034 1.1E-06 54.2 0.0 97 7-116 255-367 (510)
104 2rgn_B RHOA/RAC/CDC42 exchange 91.1 1.5 5.2E-05 41.2 10.9 89 25-119 229-326 (354)
105 1foe_A T-lymphoma invasion and 86.3 6.1 0.00021 37.0 11.4 29 86-114 341-369 (377)
106 3ksy_A SOS-1, SON of sevenless 85.1 2.5 8.6E-05 46.0 9.1 93 6-111 445-546 (1049)
107 2d4r_A Hypothetical protein TT 82.1 2.3 7.9E-05 32.5 5.4 41 229-270 3-43 (147)
108 1t17_A Conserved hypothetical 79.2 15 0.00053 29.2 9.7 42 229-271 3-44 (148)
109 3tl1_A WHIE ORF VI, polyketide 78.8 2.5 8.5E-05 35.8 5.0 45 230-277 5-50 (159)
110 1v5m_A SH2 and PH domain-conta 71.8 22 0.00074 30.5 8.9 99 7-111 20-130 (136)
111 3tvq_A Multifunctional cyclase 70.0 5.1 0.00017 34.2 4.7 39 231-271 6-45 (169)
112 1z87_A Alpha-1-syntrophin; pro 69.1 4.5 0.00016 37.5 4.5 51 57-110 211-261 (263)
113 2le1_A Uncharacterized protein 64.0 4.9 0.00017 32.3 3.3 33 230-263 4-36 (151)
114 3ijt_A SMU.440, putative uncha 61.9 7.3 0.00025 32.6 4.0 33 229-263 19-52 (155)
115 3p51_A Uncharacterized protein 59.1 7 0.00024 33.0 3.5 30 230-261 4-33 (160)
116 3tfz_A Cyclase; helix-GRIP, BE 58.3 9.6 0.00033 31.8 4.2 42 229-271 6-47 (172)
117 3f08_A Uncharacterized protein 54.5 7.3 0.00025 32.1 2.8 34 230-264 4-37 (146)
118 3v5w_A G-protein coupled recep 52.4 72 0.0024 33.5 10.4 98 6-116 560-657 (689)
119 2zkm_X 1-phosphatidylinositol- 48.6 53 0.0018 34.9 8.8 98 10-113 22-137 (799)
120 2qpv_A Uncharacterized protein 48.6 8.9 0.00031 32.5 2.4 40 231-273 30-69 (156)
121 3q6a_A Uncharacterized protein 46.7 18 0.0006 28.5 3.8 29 230-259 3-31 (135)
122 3ggn_A Uncharacterized protein 46.6 9.6 0.00033 31.1 2.3 39 228-267 4-42 (155)
123 3p9v_A Uncharacterized protein 44.9 13 0.00044 30.8 2.8 40 230-273 9-48 (161)
124 2pcs_A Conserved protein; stru 43.3 13 0.00046 29.8 2.6 35 230-265 5-39 (162)
125 2ns9_A Hypothetical protein AP 39.5 39 0.0013 26.5 4.8 31 230-261 15-45 (157)
126 2leq_A Uncharacterized protein 39.3 15 0.00053 28.3 2.3 29 228-257 5-33 (146)
127 2jp2_A Spred-2, sprouty-relate 38.2 88 0.003 25.9 6.9 30 84-113 95-124 (126)
128 2adz_A Alpha-1-syntrophin; pro 35.8 52 0.0018 29.1 5.4 34 76-110 143-176 (178)
129 3pu2_A Uncharacterized protein 35.8 32 0.0011 28.3 3.9 31 228-259 13-43 (164)
130 2l8o_A Uncharacterized protein 33.0 16 0.00054 29.4 1.4 28 229-257 3-30 (144)
131 3jtz_A Integrase; four strande 28.0 1.4E+02 0.0049 22.9 6.1 46 58-110 27-75 (88)
132 1mke_A WIP - N-WAsp, fusion pr 27.9 2.9E+02 0.0098 23.7 8.9 93 19-114 31-144 (152)
133 3eli_A AHSA1, AHA1 domain prot 26.3 21 0.00072 28.7 1.1 23 229-251 3-25 (152)
134 2lgh_A Uncharacterized protein 24.9 28 0.00096 27.9 1.6 27 230-257 3-29 (144)
135 2lcg_A Uncharacterized protein 24.8 22 0.00074 28.2 0.9 27 230-257 3-29 (142)
136 3a98_B Engulfment and cell mot 24.7 2.1E+02 0.0071 25.4 7.4 96 10-112 37-151 (203)
137 3syx_A Sprouty-related, EVH1 d 24.1 82 0.0028 26.6 4.3 30 86-115 95-124 (130)
138 1z94_A Conserved hypothetical 23.6 24 0.00081 27.4 0.9 28 230-258 5-32 (147)
139 1xn5_A BH1534 unknown conserve 23.0 27 0.00092 27.9 1.1 29 228-257 5-33 (146)
140 2ldk_A Uncharacterized protein 22.5 33 0.0011 28.1 1.6 29 228-257 12-40 (172)
141 1xuv_A Hypothetical protein MM 22.3 36 0.0012 28.2 1.8 29 228-257 22-50 (178)
142 3q63_A MLL2253 protein; struct 21.9 32 0.0011 27.9 1.3 31 228-259 9-39 (151)
143 2kew_A Uncharacterized protein 21.7 31 0.0011 27.8 1.3 29 228-257 10-38 (152)
144 1xn6_A Hypothetical protein BC 21.2 30 0.001 27.3 1.0 31 228-259 8-38 (143)
145 2lak_A AHSA1-like protein RHE_ 21.2 33 0.0011 27.7 1.3 30 228-258 9-38 (160)
146 1tw0_A Pathogenesis-related cl 20.8 1.9E+02 0.0065 23.9 6.0 52 231-283 6-59 (157)
147 3q64_A MLL3774 protein; struct 20.3 35 0.0012 27.9 1.3 29 229-258 10-38 (162)
148 2il5_A Hypothetical protein; s 20.2 35 0.0012 27.7 1.3 29 228-257 14-42 (171)
No 1
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=99.89 E-value=9.5e-23 Score=182.39 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=105.5
Q ss_pred CCcEEEEeecCeEEEEEecccCCCCccCccceEEeeeeecCHHHHHHHh--hccCCCcccccceeeeeeEEEEEeCcccE
Q 019797 199 KHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELV--MSMDGTRYEWDCSFQYGSLVEEVDGHTAI 276 (335)
Q Consensus 199 ~~W~l~~~~nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IFe~l--m~~d~~R~eWD~~~~~~~vVE~iD~HtdI 276 (335)
..|+++..+||++||....+. ..++++|++|+|++||++||++| ++++ .|.+||..+.++++||++|++++|
T Consensus 43 ~~W~~~~~~~gv~v~~~~~~~-----~~~~~~k~~~~v~~~~~~v~~~l~~~d~~-~r~~Wd~~~~~~~vle~i~~~~~i 116 (231)
T 2r55_A 43 AGWKICREGNGVSVSWRPSVE-----FPGNLYRGEGIVYGTLEEVWDCVKPAVGG-LRVKWDENVTGFEIIQSITDTLCV 116 (231)
T ss_dssp SSCEEEECCSSEEEEEEECSS-----SSSEEEEEEEEESSCHHHHHHHHCC--CC-SHHHHCTTCSEEEEEEECSSSEEE
T ss_pred CCCEEEEeCCCEEEEEEccCC-----CCCcEEEEEEEECCCHHHHHHHHHhhCcc-hhhhhccccceeEEEEEcCCCEEE
Confidence 679999999999999986531 24579999999999999999999 5455 699999999999999999999998
Q ss_pred EEEEEeeCcccCcccCceeEEEEeeEecCCCcEEEEEeeeechhhhhhc
Q 019797 277 LYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYGSMRTVVHNQDMYELT 325 (335)
Q Consensus 277 vy~~~~p~wlp~~~~~RDlv~~RyWrR~~DGsYvIl~~Sv~H~~~~~~t 325 (335)
+| .+.+.|+++.+++||||++|+|++.+||+|+|+..||+||+++...
T Consensus 117 ~~-~~~~~~~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~ 164 (231)
T 2r55_A 117 SR-TSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKP 164 (231)
T ss_dssp EE-EECCCBTTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCT
T ss_pred EE-EEeccccCCccCCCeEEEEEEEEEcCCCEEEEEEEeccCCCCCCCC
Confidence 55 4666777788999999999999999999999999999999998653
No 2
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=99.89 E-value=5.1e-23 Score=192.14 Aligned_cols=145 Identities=21% Similarity=0.275 Sum_probs=119.2
Q ss_pred CCCCCcccCcccccCccccCC--CCccccccCCcEEEEeecCeEEEEEecccCCCCccCccceEEeeeeecCHHHHHHHh
Q 019797 170 GPPDLVHDWTRELDSDLSNQN--INNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELV 247 (335)
Q Consensus 170 gp~~~~~dwt~~~~~~~~n~~--~~~dv~~~~~W~l~~~~nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IFe~l 247 (335)
.+|-++. |+..++..+.+.+ +-.+..+.+.|++..++||++||.... +....+|+.|+|++||++||++|
T Consensus 36 ~~p~~~~-w~~~~~~~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~-------~~~l~~k~~~~v~~~~~~v~~~L 107 (258)
T 3fo5_A 36 EVPLSVP-WDPSNQVYLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLED-------DKFLSFHMEMVVHVDAAQAFLLL 107 (258)
T ss_dssp TSCSEEE-CCGGGHHHHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEEC-------SSCEEEEEEEEESSCHHHHHHHH
T ss_pred CCCcccc-cCcccceecccCCHHHHHhhhccCCCEEEecCCCeEEEEEEC-------CCceEEEEEEEEeCCHHHHHHHH
Confidence 3555555 9987766544333 355667789999999999999999532 22457899999999999999999
Q ss_pred hccCCCcccccceeeeeeEEEEEeCcccEEEEEEeeCcccCcccCceeEEEEeeEec-CCCc-EEEEEeeeechhhhhhc
Q 019797 248 MSMDGTRYEWDCSFQYGSLVEEVDGHTAILYHRLQLDWFPMFVWPRDLCYVRYWRRN-DDGS-YGSMRTVVHNQDMYELT 325 (335)
Q Consensus 248 m~~d~~R~eWD~~~~~~~vVE~iD~HtdIvy~~~~p~wlp~~~~~RDlv~~RyWrR~-~DGs-YvIl~~Sv~H~~~~~~t 325 (335)
|++. .|.+||..+.+.+|||+||+| ||||+ +..+|+++.++|||||++|+||+. +||. |+|+.+||+||++|..-
T Consensus 108 ~D~~-~R~~WD~~~~~~~vle~id~~-~ivY~-~~~p~~~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~ 184 (258)
T 3fo5_A 108 SDLR-QRPEWDKHYRSVELVQQVDED-DAIYH-VTSPALGGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETP 184 (258)
T ss_dssp HCGG-GGGGTCTTCCEEEEEEEEETT-EEEEE-EEECCCTTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCT
T ss_pred hCch-hHhHhhhhccEEEEEEEcCCC-eEEEE-EecCCccCCCCCCEEEEEEEEEeccCCCCEEEEEEEeccCCCCCCCC
Confidence 9886 599999999999999999999 89994 555555467999999999999985 4885 99999999999998654
No 3
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=99.87 E-value=4.6e-22 Score=178.45 Aligned_cols=118 Identities=14% Similarity=0.234 Sum_probs=104.3
Q ss_pred cCCcEEEEeecCeEEEEEecccCCCCccCccceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEeCcccEE
Q 019797 198 RKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVDGHTAIL 277 (335)
Q Consensus 198 ~~~W~l~~~~nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD~HtdIv 277 (335)
...|++....||++||..... .+.+.++|++|+|++||++||++|++.+ .|.+||..+.+.++||++|+|++|+
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~-----~~~~~~~k~~~~v~~~~~~v~~~l~d~~-~r~~Wd~~~~~~~vle~id~~~~I~ 115 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSE-----EFNGYLYKAQGVMDDVVNNVIDHIRPGP-WRLDWDRLMTSLDVLEHFEENCCVM 115 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECS-----SSSSEEEEEEEEESSCHHHHHHHHSSST-THHHHCSSEEEEEEEEECSTTEEEE
T ss_pred CCCCEEEEECCCEEEEEEecc-----CCCceEEEEEEEEeCCHHHHHHHHhCcc-cccccccceeeEEEEEEcCCCeEEE
Confidence 567999999999999998533 1345789999999999999999999976 6999999999999999999999999
Q ss_pred EEEEeeCcccCcccCceeEEEEeeEecCCCcEEEEEeeeechhhhh
Q 019797 278 YHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYGSMRTVVHNQDMYE 323 (335)
Q Consensus 278 y~~~~p~wlp~~~~~RDlv~~RyWrR~~DGsYvIl~~Sv~H~~~~~ 323 (335)
|....+.| |+++++||||++|+|++.+|| |+|+..||+||+++.
T Consensus 116 y~~~~~~~-~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~~ 159 (224)
T 1jss_A 116 RYTTAGQL-LNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETRP 159 (224)
T ss_dssp EEEECCBT-TTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCCT
T ss_pred EEEccccc-CCCCCCCeEEEEEEEEEcCCe-EEEEEeeeecCCCCC
Confidence 99999754 345999999999999999887 677889999999843
No 4
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=99.85 E-value=4.5e-21 Score=171.12 Aligned_cols=119 Identities=18% Similarity=0.258 Sum_probs=102.1
Q ss_pred cCCcEEEE-eecCeEEEEEecccCCCCccCccceEEeeeeecCHHHHHHHh-hccCCCcccccceeeeeeEEEEEeCccc
Q 019797 198 RKHWRLLQ-CQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELV-MSMDGTRYEWDCSFQYGSLVEEVDGHTA 275 (335)
Q Consensus 198 ~~~W~l~~-~~nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IFe~l-m~~d~~R~eWD~~~~~~~vVE~iD~Htd 275 (335)
...|++.. .+||+.||....+ +.+.++|+.|+|++||++||+.| ++++ .|.+||..+.+.++||++|+|++
T Consensus 30 ~~gW~~~~~~~~gv~vy~~~~~------~~g~~~k~~~~v~~~~~~v~~~l~~d~~-~r~~Wd~~~~~~~vle~~~~~t~ 102 (221)
T 3p0l_A 30 QEGWKKESQQDNGDKVMSKVVP------DVGKVFRLEVVVDQPMERLYEELVERME-AMGEWNPNVKEIKVLQKIGKDTF 102 (221)
T ss_dssp CTTCEEEEECTTSCEEEEEECS------SSCEEEEEEEEESSCHHHHHHHHTTTGG-GTTTSCTTCSEEEEEEECSSSEE
T ss_pred CCCCeEeeecCCCcEEEEEEcC------CCceEEEEEEEEcCCHHHHHHHHHhccc-hhhhcCcchheEEEEEecCCCeE
Confidence 46799995 8899999998754 23589999999999999999998 5777 59999999999999999999999
Q ss_pred EEEEEEeeCcccCcccCceeEEEEeeEecCCCcEEEEEeeeechhhhhhc
Q 019797 276 ILYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYGSMRTVVHNQDMYELT 325 (335)
Q Consensus 276 Ivy~~~~p~wlp~~~~~RDlv~~RyWrR~~DGsYvIl~~Sv~H~~~~~~t 325 (335)
|+|... +.|+++.+++||||++|+|++. +|+|+|+..||+||++|...
T Consensus 103 I~y~~~-~~~~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~ 150 (221)
T 3p0l_A 103 ITHELA-AEAAGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQK 150 (221)
T ss_dssp EEEEEE-CC---CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCT
T ss_pred EEEEee-ccccCCccCCceEEEEEEEEEc-CCeEEEEEEeccCCCCCCCC
Confidence 888765 4455567999999999999996 79999999999999998753
No 5
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=99.84 E-value=6.9e-21 Score=170.43 Aligned_cols=119 Identities=15% Similarity=0.221 Sum_probs=101.6
Q ss_pred cCCcEEEEee-cCeEEEEEecccCCCCccCccceEEeeeeecCHHHHH-HHhhccCCCcccccceeeeeeEEEEEeCccc
Q 019797 198 RKHWRLLQCQ-NGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIF-ELVMSMDGTRYEWDCSFQYGSLVEEVDGHTA 275 (335)
Q Consensus 198 ~~~W~l~~~~-nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IF-e~lm~~d~~R~eWD~~~~~~~vVE~iD~Htd 275 (335)
...|++.... ||+.||+...+ +.+..+|+.|+|++||++|| +++++++ .|.+||..+.++++||++|+||+
T Consensus 41 ~~~W~~~~~~~~g~~vy~~~~~------~~g~~~k~~~~v~~~~~~v~~~~~~d~~-~r~~Wd~~~~~~~vle~~~~~t~ 113 (229)
T 1em2_A 41 EENWKFEKNNEYGDTVYTIEVP------FHGKTFILKTFLPCPAELVYQEVILQPE-RMVLWNKTVTACQILQRVEDNTL 113 (229)
T ss_dssp GGGCEEEEECTTCCEEEEEEET------TTEEEEEEEEEESSCHHHHHHHTTTCHH-HHTTTCTTEEEEEEEEEETTTEE
T ss_pred CCCCEEEEecCCCCEEEEEecC------CCCceEEEEEEecCCHHHHHHHHHhCcc-chhhcccccceEEEEEecCCCeE
Confidence 3589999997 89999998765 23468999999999999999 6777776 69999999999999999999999
Q ss_pred EEEEEEeeCcccCcccCceeEEEEeeEecCCCcEEEEEeeeechhhhhhc
Q 019797 276 ILYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYGSMRTVVHNQDMYELT 325 (335)
Q Consensus 276 Ivy~~~~p~wlp~~~~~RDlv~~RyWrR~~DGsYvIl~~Sv~H~~~~~~t 325 (335)
|+|....| .+++.+++||||++|+|++. +++|+|+.+||+||+++...
T Consensus 114 I~~~~~~p-~~~~~~~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~ 161 (229)
T 1em2_A 114 ISYDVSAG-AAGGVVSPRDFVNVRRIERR-RDRYLSSGIATSHSAKPPTH 161 (229)
T ss_dssp EEEEEECC-BTTTTBCCEEEEEEEEEEEC-SSEEEEEEEECCCTTSCCCT
T ss_pred EEEEEecC-cCCCCcCCCeeEEEEEEEEc-CCEEEEEEecccCCCCCCCC
Confidence 87765544 33456999999999999998 66799999999999998653
No 6
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=99.84 E-value=1.2e-20 Score=172.25 Aligned_cols=118 Identities=21% Similarity=0.201 Sum_probs=103.0
Q ss_pred ccCCcEEEEeecCeEEEEEecccCCCCccCccceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEeCcccE
Q 019797 197 SRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVDGHTAI 276 (335)
Q Consensus 197 ~~~~W~l~~~~nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD~HtdI 276 (335)
....|++....||+.||....+. .+...++|++++|+++|++||..|+.- |.+||..+.+.++||+||++++|
T Consensus 48 ~~~gW~~~~~~~gi~V~~k~~~~----~~~~~~~K~~~~v~~~~~~v~~~ll~d---r~~Wd~~~~~~~vle~id~~~~I 120 (237)
T 2pso_A 48 KFKGWVTCSSTDNTDLAFKKVGD----GNPLKLWKASVEVEAPPSVVLNRVLRE---RHLWDEDFVQWKVVETLDRQTEI 120 (237)
T ss_dssp HCCSCEEECCSSSCEEEEECCCS----SCCCCEEEEEEEESSCHHHHHHHHHHC---GGGTCTTBCCCEEEEEEETTEEE
T ss_pred CCCCCEEEecCCCeEEEEEEcCC----CCCcEEEEEEEEEcCChHHHHHHHHhh---hhhHHhhhceEEEEEEcCCCcEE
Confidence 36789999999999999986421 234468999999999999998766532 99999999999999999999999
Q ss_pred EEEEEeeCcccCcccCceeEEEEeeEec-CCCcEEEEEeeeechhhhhh
Q 019797 277 LYHRLQLDWFPMFVWPRDLCYVRYWRRN-DDGSYGSMRTVVHNQDMYEL 324 (335)
Q Consensus 277 vy~~~~p~wlp~~~~~RDlv~~RyWrR~-~DGsYvIl~~Sv~H~~~~~~ 324 (335)
+|+.+++.| .+++||||++|+|+++ +||+|+|+..||.||++|..
T Consensus 121 ~y~~~~~p~---p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~ 166 (237)
T 2pso_A 121 YQYVLNSMA---PHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL 166 (237)
T ss_dssp EEEEECCSS---SCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC
T ss_pred EEEEecCCC---CcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCC
Confidence 999999655 4899999999999985 78999999999999998865
No 7
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=99.82 E-value=1.1e-19 Score=165.31 Aligned_cols=125 Identities=15% Similarity=0.280 Sum_probs=106.1
Q ss_pred cccccCCcEEEEeecCeEEEEEecccCCCCccC-ccceEEeeeee-cCHHHHHHHhhccCCCcccccceeeeeeEEEEEe
Q 019797 194 QAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSC-SRAMKAVGVVE-ASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVD 271 (335)
Q Consensus 194 dv~~~~~W~l~~~~nGlrif~e~~~~~~~~~~~-~~~~kavgvV~-aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD 271 (335)
.+.+...|+++...||++||....+.. +. -+.+|++++|. ++|++||+++++++ .|.+||..+.+.+|||+||
T Consensus 42 ~~~~~~~W~~~~~~~gv~vy~~~~~~~----g~~~~~~K~~~~~~~~~~~~v~~~l~d~~-~r~~Wd~~~~~~~vle~i~ 116 (255)
T 2e3n_A 42 DVGGDANWQLVVEEGEMKVYRREVEEN----GIVLDPLKATHAVKGVTGHEVCNYFWNVD-VRNDWETTIENFHVVETLA 116 (255)
T ss_dssp CCTTCTTEEEEEEETTEEEEEECCEET----TEECCCEEEEEEEETCCHHHHHHHHHCGG-GHHHHCCSEEEEEEEEEEE
T ss_pred hcCCCCCcEEEEeCCCEEEEEEEcCCC----CceeeeEEEEEEEcCCCHHHHHHHHhCcc-hHhhhhhhcceeEEEEEcC
Confidence 344567899999999999999875421 11 12689999886 89999999999998 6999999999999999999
Q ss_pred CcccEEEEEEeeCcccCcccCceeEEEEeeEec----CC--CcEEEEEeeeechhhhhhcc
Q 019797 272 GHTAILYHRLQLDWFPMFVWPRDLCYVRYWRRN----DD--GSYGSMRTVVHNQDMYELTW 326 (335)
Q Consensus 272 ~HtdIvy~~~~p~wlp~~~~~RDlv~~RyWrR~----~D--GsYvIl~~Sv~H~~~~~~t~ 326 (335)
++++|+|..++.. +.+++||||++|+||+. ++ ++|+|+..|++|++++.+..
T Consensus 117 ~~~~i~y~~~~~p---~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g 174 (255)
T 2e3n_A 117 DNAIIIYQTHKRV---WPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNR 174 (255)
T ss_dssp TTEEEEEEEECCC---TTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSS
T ss_pred CCCEEEEEEeecC---CCcCCceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCC
Confidence 9999999999954 45899999999999987 34 49999999999999887543
No 8
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=99.81 E-value=4.1e-19 Score=153.77 Aligned_cols=118 Identities=14% Similarity=0.221 Sum_probs=103.4
Q ss_pred cCCcEEEEeecCeEEEEEecccCCCCccCccceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEeCcccEE
Q 019797 198 RKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVDGHTAIL 277 (335)
Q Consensus 198 ~~~W~l~~~~nGlrif~e~~~~~~~~~~~~~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD~HtdIv 277 (335)
+..|++....||++||....+. +....+|+.++|++||+++|++|++++ .|.+||..+..++|||+ +++++|+
T Consensus 2 ~~~W~~~~~~~gv~v~~~~~~~-----~~~~~~k~~~~v~~s~~~v~~~l~D~~-~~~~W~~~~~~~~vle~-~~~~~i~ 74 (189)
T 3qsz_A 2 QDGWSLAKDAEGIKVYVRNVEG-----SPLREFRGEVRLKAAADDVVKVLRDAN-AFRQWMPDVAASELLKA-TDTEQYH 74 (189)
T ss_dssp -CCCEEEEEETTEEEEEECCTT-----CSSCEEEEEEEESSCHHHHHHHHHCGG-GGGGTSTTEEEEEEEEE-CSSEEEE
T ss_pred CCCCEEEEcCCCEEEEEEeCCC-----CCeEEEEEEEEEECCHHHHHHHHHhHH-HhhhHHHhcCEEEEEee-cCCceEE
Confidence 5689999999999999987541 234689999999999999999999998 59999999999999999 9999999
Q ss_pred EEEEeeCcccCcccCceeEEEEeeEecCCCcEEEEEeeeechhhhhhcc
Q 019797 278 YHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYGSMRTVVHNQDMYELTW 326 (335)
Q Consensus 278 y~~~~p~wlp~~~~~RDlv~~RyWrR~~DGsYvIl~~Sv~H~~~~~~t~ 326 (335)
|..++..| .+++||||+.|+|++..||+|+|.+.| .|+.+|....
T Consensus 75 y~~~~~p~---p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~ 119 (189)
T 3qsz_A 75 YLDNSAPW---PVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKG 119 (189)
T ss_dssp EEEECCSS---SCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTT
T ss_pred EEEeecCC---CcCCcceEEEEEEEECCCCeEEEEEEc-CCCccCCCCC
Confidence 99999554 589999999999999989998887766 7888887544
No 9
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=99.80 E-value=3e-19 Score=156.76 Aligned_cols=118 Identities=21% Similarity=0.305 Sum_probs=101.9
Q ss_pred ccCCcEEEEeecCeEEEEEecccCCCCccCccceEEeeee-ecCHHHHHHHhhccCCCcccccceeeeeeEEEEEeCccc
Q 019797 197 SRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVV-EASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVDGHTA 275 (335)
Q Consensus 197 ~~~~W~l~~~~nGlrif~e~~~~~~~~~~~~~~~kavgvV-~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD~Htd 275 (335)
+...|+++..++|++||....+. +..+.+|++|+| ++||++||++|++++ .|.+||..+.+.+|+|. |+ ++
T Consensus 26 ~~~~W~~~~~~~~v~v~~~~~~~-----~~~~~~k~~~~i~~~~~~~v~~~l~d~~-~r~~Wd~~~~~~~vle~-~~-~~ 97 (214)
T 1ln1_A 26 AGADWQLLVETSGISIYRLLDKK-----TGLYEYKVFGVLEDCSPTLLADIYMDSD-YRKQWDQYVKELYEQEC-NG-ET 97 (214)
T ss_dssp TTTTCEEEEEETTEEEEEEEETT-----TTEEEEEEEEEETTSCHHHHHHHHHCHH-HHHHHCTTEEEEEEEEE-TT-EE
T ss_pred CCCCcEEEEECCCeEEEEeccCC-----CCcEEEEEEEEECCCCHHHHHHHHcCHH-HHHHHHHHHhhEEEecc-CC-CE
Confidence 45689999999999999986541 334699999999 599999999999987 59999999999999998 77 88
Q ss_pred EEEEEEeeCcccCcccCceeEEEEeeEec-CCCc--EEEEEeeeechhhhhhc
Q 019797 276 ILYHRLQLDWFPMFVWPRDLCYVRYWRRN-DDGS--YGSMRTVVHNQDMYELT 325 (335)
Q Consensus 276 Ivy~~~~p~wlp~~~~~RDlv~~RyWrR~-~DGs--YvIl~~Sv~H~~~~~~t 325 (335)
|+|.+++.+| .+++||||+.|+|++. +||+ |+|+.+||+||+++.+.
T Consensus 98 i~~~~~~~p~---p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~ 147 (214)
T 1ln1_A 98 VVYWEVKYPF---PMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERS 147 (214)
T ss_dssp EEEEEECCCT---TSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCT
T ss_pred EEEEEEEcCC---CCCCceEEEEEEEEecccCCCeEEEEEEecccCCCCCCCC
Confidence 9999999544 4799999999999975 4774 78999999999988654
No 10
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.68 E-value=2.1e-16 Score=130.12 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=77.2
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCC---C----CCccEEEEecCceEEeeCCcceecCceeEE
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD---N----QVPIKTLLIDGNCRVEDRGLKTHHGHMVYV 76 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~---~----~~Pirs~vid~~~rVed~Gre~~hg~~~yv 76 (335)
.+.+|||||+.|.. ...+++|||||+++.|.|||..+.. . ..|.+++-| .+|+|+.. .+ -+.+..|+
T Consensus 11 ~~~k~G~L~K~g~~---~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L-~~~~v~~~-~~-~~~~k~~~ 84 (124)
T 2w2x_D 11 EHKQQGELYMWDSI---DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDL-NTYNVVKA-PQ-GKNQKSFV 84 (124)
T ss_dssp --CCEEEEEEEETT---TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEG-GGEEEEEC-TT-CBTTBSEE
T ss_pred hcceeEEEEEECCC---CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEEC-CCCEEEEc-cC-CcCCCCEE
Confidence 45699999999843 5668899999999999999975421 1 134566667 67777763 22 23356689
Q ss_pred EEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 77 LSVYNKKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 77 f~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
|.|+....+.+.+.|+|.|.||+..||+||+.|+.
T Consensus 85 F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 85 FILEPKQQGDPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp EEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence 99999877788999999999999999999999953
No 11
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.63 E-value=1.6e-15 Score=129.14 Aligned_cols=99 Identities=13% Similarity=0.185 Sum_probs=75.8
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecc----cCCCCCCCccEEEEecCceEEeeCC--cceecCceeEEEE
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYK----KKPQDNQVPIKTLLIDGNCRVEDRG--LKTHHGHMVYVLS 78 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK----~~P~~~~~Pirs~vid~~~rVed~G--re~~hg~~~yvf~ 78 (335)
.+++||||+.|.+.+ --+++|||||+++.|.||| ++. ..+|++.+.+ ++|+|+.-. .+.. +.-|+|.
T Consensus 8 ~~~~G~L~KqG~~~~--K~WKrRwFVL~~~~LyYfk~~~~~~~--~~~p~G~I~L-~g~tV~~~~~~~~~~--~~k~~F~ 80 (126)
T 1wi1_A 8 MKHSGYLWAIGKNVW--KRWKKRFFVLVQVSQYTFAMCSYREK--KAEPQELLQL-DGYTVDYTDPQPGLE--GGRAFFN 80 (126)
T ss_dssp EEEEEEEEEECSSSC--CSCEEEEEEEEEEETTEEEEEECCSS--SSCCSEEEEC-SSCEEEECCCCSSCC--SCSSEEE
T ss_pred CceeEEEEEeCCCcc--cccceEEEEEeCCEEEEEEccccccc--CCCCceEEEC-CCcEEEEecCCcccc--cCceEEE
Confidence 359999999997543 3345999999999999998 444 2489999999 567887321 1112 2347888
Q ss_pred EEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 79 VYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 79 iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
|.-. ++++.|+|.|.||++.||+||..|+.|.
T Consensus 81 ~v~~---~~ty~~~Adseee~~~WikAi~~A~~~~ 112 (126)
T 1wi1_A 81 AVKE---GDTVIFASDDEQDRILWVQAMYRATGQS 112 (126)
T ss_dssp EECS---SCEEEEECSSHHHHHHHHHHHHHHHTCS
T ss_pred EecC---CceEEEEcCCHHHHHHHHHHHHHHhccc
Confidence 7743 4579999999999999999999998754
No 12
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.62 E-value=2.1e-15 Score=126.65 Aligned_cols=99 Identities=18% Similarity=0.355 Sum_probs=76.2
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.++|||++.| +..-+++|||||+++.|.|||... + ..|++++.|. +|.|.+... .+.-|.|.|+..
T Consensus 6 ~~v~k~GwL~K~g----~~k~WkrRWfVLk~~~L~yyk~~~-~-~~p~G~I~L~-~~~v~~~~~----~~~~~~F~i~~~ 74 (130)
T 1v88_A 6 SGIVMADWLKIRG----TLKSWTKLWCVLKPGVLLIYKTQK-N-GQWVGTVLLN-ACEIIERPS----KKDGFCFKLFHP 74 (130)
T ss_dssp SSCCEEEEEEECC----SSSSCEEEEEEEETTEEEEESCSS-S-CCCCEEEECS-SCEECCCCT----TTSSCEEEEECT
T ss_pred CceEEEeEEEEeC----CCCCceEEEEEEECCEEEEECCCC-C-CCceEEEEcC-CCEEEECCC----CCCCeEEEEEcC
Confidence 4556999999987 233466999999999999998654 3 4899999994 555654311 234589999976
Q ss_pred CCC---------------------cceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 83 KEK---------------------YHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 83 ~~~---------------------~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
..+ .+.+.|.|.|.+|+..||+||+.||..
T Consensus 75 ~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 75 LEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp TCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred CccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 442 245889999999999999999999653
No 13
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.61 E-value=6.8e-15 Score=116.68 Aligned_cols=105 Identities=22% Similarity=0.311 Sum_probs=81.3
Q ss_pred CCCCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEE
Q 019797 1 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVY 80 (335)
Q Consensus 1 ~~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iy 80 (335)
|.+.+.+||||++.|... .-+++|||||+++.|.|||.+ .+ ..|.+.+.|.+++.|+.... ..+..|+|.|.
T Consensus 1 me~~~~~~G~L~K~g~~~---~~Wk~R~fvL~~~~L~yy~~~-~~-~~~~g~i~L~~~~~~~~~~~---~~~~~~~F~i~ 72 (113)
T 1pls_A 1 MEPKRIREGYLVKKGSVF---NTWKPMWVVLLEDGIEFYKKK-SD-NSPKGMIPLKGSTLTSPCQD---FGKRMFVFKIT 72 (113)
T ss_dssp CCCCCSEEEEEEEESSSS---SCCEEEEEEEETTEEEEESST-TC-SSCSEEEESSSCCEESSCCS---SCCSSSEEEEE
T ss_pred CCCCCcEEEEEEEeCCCC---CCceEEEEEEECCEEEEEeCC-CC-CCcceEEEcCCCEEEEecCC---CCCCccEEEEE
Confidence 456778999999998643 345699999999999999865 33 48999999977776652111 12456789997
Q ss_pred ecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhh
Q 019797 81 NKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQE 115 (335)
Q Consensus 81 n~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~ 115 (335)
.. ..+.+.|.|.|.+|+..|++||+.||.....
T Consensus 73 ~~--~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 105 (113)
T 1pls_A 73 TT--KQQDHFFQAAFLEERDAWVRDINKAIKCIEG 105 (113)
T ss_dssp ET--TTEEEEEECSSHHHHHHHHHHHHHHHHHHTT
T ss_pred cC--CCCEEEEECCCHHHHHHHHHHHHHHHhccch
Confidence 64 3689999999999999999999999866533
No 14
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.60 E-value=7.2e-15 Score=117.67 Aligned_cols=101 Identities=20% Similarity=0.326 Sum_probs=79.1
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.++|||++.|...- -+++|||||+++.|.|||.. .+ ..|.+.+.|.+ |.|..... ....++|.|...
T Consensus 3 ~~~~~~G~L~K~g~~~~---~Wk~R~fvL~~~~L~yy~~~-~~-~~~~g~i~L~~-~~v~~~~~----~~~~~~f~i~~~ 72 (127)
T 1fgy_A 3 FNPDREGWLLKLGGRVK---TWKRRWFILTDNCLYYFEYT-TD-KEPRGIIPLEN-LSIREVLD----PRKPNCFELYNP 72 (127)
T ss_dssp SSCSEEEEEEEECSSSC---CEEEEEEEEETTEEEEESST-TC-SSCSEEEECTT-CEEEEECC----SSCSSEEEEECS
T ss_pred CCCceEeEEEEECCCCC---CeEEEEEEEECCEEEEeCCC-CC-CCcceEEECCc-eEEEEccC----CCCCceEEEecC
Confidence 56789999999986543 35699999999999999854 34 48999999955 55554321 245678999876
Q ss_pred CCC-------------------cceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 83 KEK-------------------YHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 83 ~~~-------------------~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
... .+.+.|.|.|.+|+..|++||+.||.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 73 SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp SSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 432 4789999999999999999999998654
No 15
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.59 E-value=1.1e-14 Score=112.89 Aligned_cols=104 Identities=18% Similarity=0.297 Sum_probs=78.7
Q ss_pred CCceeeeEEEeeecc-cccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 4 KVVYEGWMVRYGRRK-IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 4 ~~~~EGWly~~g~~~-~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
.+.++|||++.|... +...-+++|||||+++.|.|||... + ..|.+.+.|.++. |..........+.-|.|.|...
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~-~-~~~~g~i~L~~~~-v~~~~~~~~~~~~~~~F~i~~~ 78 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEK-S-KQPKGTFLIKGYS-VRMAPHLRRDSKKESCFELTSQ 78 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTT-C-SSCSEEEECTTCE-EEECGGGCSSGGGGGEEEEECS
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCC-C-CCCCEEEEecceE-EEeCCccccccCCcceEEEEcC
Confidence 467999999999753 3335677999999999999998544 3 4899999995554 5542111122344588999853
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
..+.+.|.|.|.+|+..|+.||+.||..
T Consensus 79 --~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 79 --DRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp --SSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 4588999999999999999999999764
No 16
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.59 E-value=9.5e-15 Score=121.60 Aligned_cols=101 Identities=17% Similarity=0.318 Sum_probs=76.5
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC-CCccEEEEecCceEEeeCCccee--cC---ceeEEEE
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN-QVPIKTLLIDGNCRVEDRGLKTH--HG---HMVYVLS 78 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~-~~Pirs~vid~~~rVed~Gre~~--hg---~~~yvf~ 78 (335)
+.++|||++.|...-++ ++|||||++++|.|||...... ..|++++.| ++|.|+....+.. .+ ..-+.|.
T Consensus 6 ~~k~G~L~Kk~~~~k~W---~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L-~~c~v~~~~~~~~~~~~~~~~~~~~F~ 81 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSY---SKGYYVLTPNFLHEFKTADRKKDLVPVMSLAL-SECTVTEHSRKNSTSSPNSTGSDAKFV 81 (120)
T ss_dssp CSEEEEEEEEETTTTEE---EEEEEEECSSEEEEESSCCTTTCCSCSEEEEG-GGEEEEEECCCCC---------CCEEE
T ss_pred ccEEEEEEEcCCCCCCC---ccEEEEEeCCEEEEEcCCCcCcCCCceEEEEC-CCCEEEEcccccccccccccCCCcEEE
Confidence 67999999999744444 4999999999999999876432 589999999 7888877433210 00 1334566
Q ss_pred EEecCCC----cceEEEeecCHHHHHHHHHHHHHH
Q 019797 79 VYNKKEK----YHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 79 iyn~~~~----~~~~~laa~s~eea~~W~~a~~~A 109 (335)
|..+... ++.+.|.|.|.+|+..|++||+.|
T Consensus 82 i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~ 116 (120)
T 4a6h_A 82 LHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKIL 116 (120)
T ss_dssp EEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHH
Confidence 6655432 579999999999999999999998
No 17
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=9.6e-15 Score=115.33 Aligned_cols=103 Identities=24% Similarity=0.352 Sum_probs=80.9
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.+||||++.|.. ..-+++|||||+++.|.|||.. .+. .|.+.+.|.+.|.|+...... ..-+.|.|...
T Consensus 6 ~~~~~~G~L~K~~~~---~~~Wk~R~fvL~~~~L~yy~~~-~~~-~~~g~i~L~~~~~v~~~~~~~---~~~~~F~i~~~ 77 (115)
T 2dn6_A 6 SGVLKQGYMMKKGHR---RKNWTERWFVLKPNIISYYVSE-DLK-DKKGDILLDENCCVESLPDKD---GKKCLFLVKCF 77 (115)
T ss_dssp CSCSEEEEEEEECTT---SSCEEEEEEEECSSCEEEESST-TCS-SEEEEECCCTTCEEEEECCCT---TCCSEEEEECS
T ss_pred CCceEEEEEEecCCC---CCCcEEeEEEEECCEEEEeCCC-CCc-ccCcEEEecCcEEEEECCCCC---CCeeEEEEEeC
Confidence 455699999999863 3446699999999999999853 344 899999998888887632211 23468888653
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
.+.+.|.|.|.+|+..|+.||+.||..+++.
T Consensus 78 ---~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~ 108 (115)
T 2dn6_A 78 ---DKTFEISASDKKKKQEWIQAIHSTIHLLKLG 108 (115)
T ss_dssp ---SCEEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---CCEEEEEcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999999999999999998876554
No 18
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.58 E-value=4e-15 Score=114.99 Aligned_cols=92 Identities=15% Similarity=0.135 Sum_probs=72.4
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCC
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKE 84 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~ 84 (335)
+.++|||++.|...-|++ +|||||+++.|.||+.+......|++.+.+..+..+.+.+. -+.|.|..
T Consensus 1 V~k~G~L~K~g~~~k~Wk---kR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~~~-------~~~F~i~~--- 67 (94)
T 2rsg_A 1 VERCGVLSKWTNYIHGWQ---DRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDFD-------ECRFDISV--- 67 (94)
T ss_dssp CCEEEEEEEESSSTTCEE---EEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEECSSC-------SSEEEEEE---
T ss_pred CCEEEEEEEeCCCCCCce---EEEEEEECCEEEEEEecccccccceeeEecceeeeecCccc-------ceeEEEEe---
Confidence 468999999986544555 99999999999999865543467999999965555444322 24677765
Q ss_pred CcceEEEeecCHHHHHHHHHHHHHH
Q 019797 85 KYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 85 ~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
.++.+.|.|.|.+|+..||+||++|
T Consensus 68 ~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 68 NDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp TTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHHHhh
Confidence 4688999999999999999999998
No 19
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.57 E-value=1.5e-14 Score=114.12 Aligned_cols=102 Identities=20% Similarity=0.325 Sum_probs=77.5
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.++|||++.|...- -+++|||||+++.|.|||... + ..|.+.+.| .+|.|.+...... ...-|+|.|...
T Consensus 6 ~~~~~~G~L~K~g~~~~---~Wk~R~fvL~~~~L~yy~~~~-~-~~~~g~i~L-~~~~v~~~~~~~~-~~~~~~f~i~~~ 78 (118)
T 1v89_A 6 SGPIKMGWLKKQRSIVK---NWQQRYFVLRAQQLYYYKDEE-D-TKPQGCMYL-PGCTIKEIATNPE-EAGKFVFEIIPA 78 (118)
T ss_dssp SCEEEEEEEEEECSSSS---CEEEEEEEEETTEEEEESSSS-C-CSCSEEECS-TTEEEEEECCCSS-CCCCCEEEEEES
T ss_pred CCCcEEEEEEecCCCCC---CccEEEEEEECCEEEEEeCCC-C-CCceEEEEC-CCCEEEEcCcCcc-cCCcceEEEECC
Confidence 34569999999986433 366999999999999998654 3 489999999 5555554221111 133689999875
Q ss_pred C-----CCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 83 K-----EKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 83 ~-----~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
. ...+.+.|.|.|.+|+..|++||+.||.
T Consensus 79 ~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 79 SWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 3 3778999999999999999999999965
No 20
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.57 E-value=2.2e-14 Score=113.30 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=74.6
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.++|||++.|... .-+++|||||+++.|.|||.+. + ..|.+++.|.+++.|... .+. ..-++|.|..
T Consensus 6 ~~~~~~G~L~K~~~~~---~~Wk~RwfvL~~~~L~yyk~~~-~-~~~~~~i~L~~~~~~~~~-~~~---~~~~~F~i~~- 75 (109)
T 1wgq_A 6 SGSTMSGYLYRSKGSK---KPWKHLWFVIKNKVLYTYAASE-D-VAALESQPLLGFTVTLVK-DEN---SESKVFQLLH- 75 (109)
T ss_dssp CSCSCEEEEEEESSTT---SCCEEEEEEEETTEEEEESCTT-C-SSCSEEEECSSEEEEECC-CSS---CSSSEEEEEE-
T ss_pred CCCeEEEEEEeCCCCC---CCceeEEEEEeCCEEEEECCCC-c-CccCceEECCCCEEEECC-CCC---CCCcEEEEEe-
Confidence 4566999999987543 3456999999999999998543 3 489999999665555442 221 2346888875
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
.+.+.+.|.|.|.+|+..|+.||+.|+
T Consensus 76 -~~~~~~~~~a~s~~e~~~Wi~al~~a~ 102 (109)
T 1wgq_A 76 -KGMVFYVFKADDAHSTQRWIDAFQEGT 102 (109)
T ss_dssp -TTEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 456779999999999999999999993
No 21
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=116.99 Aligned_cols=103 Identities=22% Similarity=0.381 Sum_probs=79.6
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEEec--ceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEE
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVLES--RLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSV 79 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g--~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~i 79 (335)
++.+.+||||++.|... .-+++|||||++ +.|.|||.+......|.+++.|.. |.|+... ..-+.|.|
T Consensus 5 ~~~~~~~G~L~K~~~~~---~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~-~~v~~~~------~~~~~F~i 74 (120)
T 2d9x_A 5 SSGENVYGYLMKYTNLV---TGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAG-AVISPSD------EDSHTFTV 74 (120)
T ss_dssp CSCCCCEEEEEEEEETT---TEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTT-CCEECCS------SSSSCEEE
T ss_pred CCCCcEEEEEEecCCCC---CCceEEEEEEECCCCEEEEEecCcccCCCccceEEcce-EEEEecC------CCCCEEEE
Confidence 35667999999999533 345699999994 799999876643347999999955 5666532 12378888
Q ss_pred EecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 80 YNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 80 yn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
... ..+.+.|.|.|.+|+..|++||+.||......
T Consensus 75 ~~~--~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (120)
T 2d9x_A 75 NAA--SGEQYKLRATDAKERQHWVSRLQICTQHHTEA 109 (120)
T ss_dssp CCS--SSCCEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcC--CCCEEEEECCCHHHHHHHHHHHHHHHHHhhhh
Confidence 753 35889999999999999999999998877554
No 22
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.56 E-value=1.1e-14 Score=113.82 Aligned_cols=94 Identities=17% Similarity=0.284 Sum_probs=73.0
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCCCc
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKY 86 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~~~ 86 (335)
|||||++.|...-+ +++|||||+++.|.|||........|.+++.| .+|.|+....+ -+.|.|.. ...
T Consensus 1 ~eG~L~K~g~~~k~---Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L-~~~~v~~~~~~------~~~F~i~~--~~~ 68 (103)
T 3rcp_A 1 MEGVLYKWTNYLTG---WQPRWFVLDNGILSYYDSQDDVCKGSKGSIKM-AVCEIKVHSAD------NTRMELII--PGE 68 (103)
T ss_dssp CEEEEEEECCTTTC---EEEEEEEEETTEEEEESSCC---CCCSCEEEG-GGCEEECCTTC------SSEEEEEE--TTT
T ss_pred CceEEEEccCCCCC---eeceEEEEECCEEEEEecCCcccCCcccEEEe-eeeEEEEcCCC------CceEEEEe--CCC
Confidence 79999999965444 45999999999999998665323479999999 57777653221 34677775 457
Q ss_pred ceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 87 HRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 87 ~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
+.+.|.|.|.+|+..|++||+.|+..
T Consensus 69 r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 69 QHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999543
No 23
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.56 E-value=1.4e-14 Score=115.46 Aligned_cols=97 Identities=14% Similarity=0.275 Sum_probs=78.3
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEe
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 81 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn 81 (335)
.+.+.++|||++.|.. +..-+++|||||+++.|.|||.+. + ..|.+.+.|...+.|+..+ -+.|.|.
T Consensus 5 ~~~~~~~G~L~K~~~~--~~~~WkkR~fvL~~~~L~yy~~~~-~-~~~~g~i~l~~~~~v~~~~--------~~~F~i~- 71 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQ--GKRMFQKRWVKFDGLSISYYNNEK-E-MYSKGIIPLSAISTVRVQG--------DNKFEVV- 71 (115)
T ss_dssp CSCCCEEEEEEECCSS--SSSCCEEEEEEECSSEEEEEESSC-C-SSCCCEEETTTEEEEEEET--------TTEEEEE-
T ss_pred CCCccEEEEEEEcCCC--CCCCCceEEEEEECCEEEEEcCCC-C-cccCCEEECCcceEEEeCC--------CCEEEEE-
Confidence 3456799999998852 233467999999999999998654 3 3799999998877888754 3678887
Q ss_pred cCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 82 KKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 82 ~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
...+.+.|.|.|.+|+..|++||+.||..+
T Consensus 72 --~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~ 101 (115)
T 2cod_A 72 --TTQRTFVFRVEKEEERNDWISILLNALKSQ 101 (115)
T ss_dssp --ESSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --eCCcEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 347889999999999999999999997544
No 24
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.55 E-value=1.8e-14 Score=120.05 Aligned_cols=106 Identities=15% Similarity=0.238 Sum_probs=82.1
Q ss_pred CCCceeeeEEEeeecc---cccccceeeEEEEecc-----eeeecccCCCCCCCccEEEEecCceEEeeCCcceecCcee
Q 019797 3 SKVVYEGWMVRYGRRK---IGRSFIHMRYFVLESR-----LLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMV 74 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~---~g~q~~~~RyFVL~g~-----~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~ 74 (335)
..+.++|||++.|.+. .+..-+++|||||+++ .|.|||..+.+. .|.+++.|..+..|... . ...-
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~-~~~g~I~L~~~~~~~~~-~----~~~~ 89 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISK-EPKGSIFLDSCMGVVQN-N----KVRR 89 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSS-CCSEEECTTTCCEECCC-C----SSCT
T ss_pred CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCC-CcCcEEecccCEEEecC-C----CCCc
Confidence 3466999999998654 2445667999999997 999999877554 89999999665554421 1 2345
Q ss_pred EEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 75 YVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 75 yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
|+|.|.... .+.+.|.|.|.+|+..|+.||+.||.+..+.
T Consensus 90 ~~F~i~~~~--~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~~ 129 (150)
T 1wg7_A 90 FAFELKMQD--KSSYLLAADSEVEMEEWITILNKILQLNFEA 129 (150)
T ss_dssp TEEEEECSS--SCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCC--CcEEEEEeCCHHHHHHHHHHHHHHHHhhhHH
Confidence 789998752 4899999999999999999999999865443
No 25
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.5e-14 Score=114.27 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=75.0
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCC
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKE 84 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~ 84 (335)
+.++|||++.|.+. ..-+++|||||+++.|.|||... + ..|.+.+.|.++ .|...+.+... ..-|+|.|.. .
T Consensus 22 ~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~~-~-~~~~g~i~L~~~-~v~~~~~~~~~-~~~~~F~i~~--~ 93 (122)
T 2yry_A 22 VTKAGWLFKQASSG--VKQWNKRWFVLVDRCLFYYKDEK-E-ESILGSIPLLSF-RVAAVQPSDNI-SRKHTFKAEH--A 93 (122)
T ss_dssp EEEEEEEEEECCSS--SCCEEEEEEEEETTEEEEESSTT-C-CSCCEEEESTTC-CCEECCTTCSC-SSSSEEEEEC--S
T ss_pred ccEEEEEEEECCCC--CCCcEEEEEEEeCCEEEEECCCC-C-CCcccEEEcCCC-EEEEcCccccC-CcccEEEEec--C
Confidence 45999999998432 34577999999999999997553 3 389999999554 46553322211 2347888864 3
Q ss_pred CcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 85 KYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 85 ~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
..+.+.|.|.|.+|+..|+.||+.|+.
T Consensus 94 ~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 94 GVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 568999999999999999999999964
No 26
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.55 E-value=3.8e-14 Score=114.34 Aligned_cols=100 Identities=20% Similarity=0.241 Sum_probs=78.7
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.++|||++.|.. ..-+++|||||+++.|.|||... + ..|.+.+.|.++..|+... ..+..|+|.|..
T Consensus 16 ~~~~~~G~L~K~g~~---~~~Wk~R~fvL~~~~L~yy~~~~-~-~~~~g~i~L~~~~~v~~~~----~~~~~~~F~i~~- 85 (126)
T 1fao_A 16 SLGTKEGYLTKQGGL---VKTWKTRWFTLHRNELKYFKDQM-S-PEPIRILDLTECSAVQFDY----SQERVNCFCLVF- 85 (126)
T ss_dssp CTTCEEEEEEEECSS---SCCEEEEEEEEETTEEEEESSTT-C-SSCSEEEEGGGCCEEEEEC----SSSSSSEEEEEE-
T ss_pred CCccEEEEEEEcCCC---CCCcccEEEEEECCEEEEeCCCC-C-CCceeEEEccceEEEEecc----cCCCCCEEEEEe-
Confidence 456699999999853 34467999999999999998543 4 4899999997777676521 123457889886
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
..+.+.|.|.|.+|+..|+.||+.||.+.+
T Consensus 86 --~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 115 (126)
T 1fao_A 86 --PFRTFYLCAKTGVEADEWIKILRWKLSQIR 115 (126)
T ss_dssp --TTEEEEEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred --CCcEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999987743
No 27
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.55 E-value=8.5e-15 Score=119.08 Aligned_cols=107 Identities=16% Similarity=0.257 Sum_probs=77.3
Q ss_pred CCCCceeeeEEEe--eecccccccceeeEEEEecceeeecccCCCCC-CCccEEEEecCceE--EeeCCcceecCceeEE
Q 019797 2 SSKVVYEGWMVRY--GRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN-QVPIKTLLIDGNCR--VEDRGLKTHHGHMVYV 76 (335)
Q Consensus 2 ~~~~~~EGWly~~--g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~-~~Pirs~vid~~~r--Ved~Gre~~hg~~~yv 76 (335)
.+.+.++|||++. |. +..-+++|||||+++.|.|||...... ..|++++.|.++.. |+...++.. ...|.
T Consensus 2 ~~~v~~~G~L~K~~~~~---~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~--~~~~~ 76 (134)
T 2y7b_A 2 NSSVEERGFLTIFEDVS---GFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFC--ARRNT 76 (134)
T ss_dssp CCCCCEEEEEEEEEEET---TEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTC--CCTTE
T ss_pred CCCceEEeeEEEEcCCC---CCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhc--cCCCE
Confidence 3678899999998 43 344567999999999999998543222 58999999955432 555333211 23467
Q ss_pred EEEEecCCC-----------------cceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 77 LSVYNKKEK-----------------YHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 77 f~iyn~~~~-----------------~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
|.|+...++ .+.+.|.|.|.+|+..||+||+.||...
T Consensus 77 F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~ 130 (134)
T 2y7b_A 77 FELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDI 130 (134)
T ss_dssp EEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 888763111 2479999999999999999999998654
No 28
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.54 E-value=2e-14 Score=114.00 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=73.1
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.++|||++. +..-+++|||||+++.|.|||.+.. ...|...+.+ .+|.|+.. .+ ...-|+|.|...
T Consensus 6 ~~~~~~G~L~K~-----~~k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l-~~~~v~~~-~~---~~~~~~F~i~~~ 74 (107)
T 2cof_A 6 SGLETSSYLNVL-----VNSQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSL-VGCEVVPD-PS---PDHLYSFRILHK 74 (107)
T ss_dssp CCCTTCCEEEEE-----ETTEEEEEEEEECSSCEEEECSSTT-CSEEEEEECT-TTCEEECC-CB---TTBSCEEEEEET
T ss_pred CCCcEeEEEEEe-----cCCCcceEEEEEECCEEEEEeCCcc-cCCCeeEEec-cceEEEEC-CC---CCCCeEEEEEeC
Confidence 456699999997 3455679999999999999987764 3355555555 56666642 11 245689999873
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
+.+.+.|.|.|.+|+..||+||+.|++
T Consensus 75 --~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 75 --GEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp --TEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred --CCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 478899999999999999999999943
No 29
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.54 E-value=4.2e-14 Score=110.65 Aligned_cols=100 Identities=17% Similarity=0.368 Sum_probs=73.9
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecc--eeeecccCCCCCCCccEEEEecCceEEeeCCcce--ecCceeEEEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR--LLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKT--HHGHMVYVLS 78 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~--~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~--~hg~~~yvf~ 78 (335)
..+.++|||++.|...-+ +++|||||+++ .|.|||.. .+ ..|.+++.|.+ |.|....... ...+..++|.
T Consensus 5 ~~~~~~G~L~K~g~~~~~---Wk~R~fvL~~~~~~L~yyk~~-~~-~~~~g~i~L~~-~~v~~~~~~~~~~~~~~~~~F~ 78 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHRRKN---WKVRKFILREDPAYLHYYDPA-GA-EDPLGAIHLRG-CVVTSVESNSNGRKSEEENLFE 78 (109)
T ss_dssp CCEEEEEEEEEECTTTCC---EEEEEEEEETTTTEEEEECTT-SC-SSCSEEEECTT-CEEEEECC--------CCSEEE
T ss_pred CceeEEEEEEEcCCCCCC---ceEEEEEEeCCCcEEEEECCC-CC-CCccEEEECCC-CEEEEccCCcccccCCCceEEE
Confidence 456799999999864333 56999999987 99999754 33 48999999955 6665422110 0113567899
Q ss_pred EEecCCCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 79 VYNKKEKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 79 iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
|... ..+.+.|.|.|.+|+..|+.||+.||
T Consensus 79 i~~~--~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 79 IITA--DEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EECT--TCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeC--CCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9864 34669999999999999999999996
No 30
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.53 E-value=2.9e-14 Score=118.98 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=75.4
Q ss_pred CceeeeEEEeeecccccccceeeEEEEe---cceeeecccC---CCCCCCccEEEEecCceEEeeCCcceecCceeEEEE
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLE---SRLLAYYKKK---PQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLS 78 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~---g~~l~~YK~~---P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~ 78 (335)
..++|||++.|... ..-+++|||||+ |++|.|||+. +.+ ..|++++.|+.++.|++.--+. ..+.-|.|.
T Consensus 15 ~~~~G~L~K~g~~~--~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~-~~~~G~I~L~~~~~V~~~~~~~-~~~~~~~F~ 90 (126)
T 1v5p_A 15 NRICGFLDIEDNEN--SGKFLRRYFILDTQANCLLWYMDNPQNLAVG-AGAVGSLQLTYISKVSIATPKQ-KPKTPFCFV 90 (126)
T ss_dssp CCEECCEEEECTTC--SSCEEEEEEEEETTTTEEEEESSCTTTSCTT-CCCSEEEETTTCCEEEECCTTT-SCSCSSEEE
T ss_pred CceEEEEEEeCCCC--CCCccceEEEEecCCCCEEEEECCCCCCCCC-ceeeEEEECCCccEEecCCccc-CCCCCEEEE
Confidence 44899999998432 345669999999 8888877653 333 5999999998878998743111 112346776
Q ss_pred EEecCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 79 VYNKKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 79 iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
|. ...+.+.|.|.|.+|+..||+||..|++
T Consensus 91 i~---t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 91 IN---ALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp EE---CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EE---CCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 64 4578999999999999999999999943
No 31
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.53 E-value=4.1e-14 Score=113.92 Aligned_cols=99 Identities=16% Similarity=0.287 Sum_probs=76.3
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
.+.++|||++.|... ..-+++|||||+++.|.|||... +. .|.+.+.| .+|.|+....+.. ...-|+|.|...
T Consensus 20 ~~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~~-~~-~~~g~i~L-~~~~v~~~~~~~~-~~~~~~F~i~~~- 92 (128)
T 2dkp_A 20 PVVRRGWLYKQDSTG--MKLWKKRWFVLSDLCLFYYRDEK-EE-GILGSILL-PSFQIALLTSEDH-INRKYAFKAAHP- 92 (128)
T ss_dssp CCCEEEEEEEECCSS--SCCEEEEEEEEETTEEEEESSTT-CC-SEEEEECG-GGSEEEECCGGGC-CSSCSEEEEECS-
T ss_pred CcEEEEEEEEeCCCC--CCCceeEEEEEeCCEEEEECCCC-Cc-ccceEEEc-CceEEEEcCCccc-CCCCeEEEEEcC-
Confidence 345999999998632 34467999999999999998543 33 89999999 5677776433322 234578999864
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
..+.+.|.|.|.+|+..|++||+.|+
T Consensus 93 -~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 93 -NMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp -SSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 35789999999999999999999994
No 32
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.53 E-value=3.3e-14 Score=114.81 Aligned_cols=105 Identities=21% Similarity=0.374 Sum_probs=77.9
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecc-eeeecccCCCCC---CCccEEEEecCceEEeeCCcceecCceeEEEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR-LLAYYKKKPQDN---QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLS 78 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~-~l~~YK~~P~~~---~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~ 78 (335)
+.+.++|||++.|... .-+++|||||+++ .|.|||.++... ..||....+- .|.|... + ...-+.|.
T Consensus 6 ~~~~~~G~L~K~g~~~---k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~-~~~~~~~--~---~~~~~~F~ 76 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYI---KTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVA-QCQLMKT--E---RPRPNTFI 76 (125)
T ss_dssp GCEEEEEEEEEECSSS---CCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECT-TCEEEEE--C---SSSTTEEE
T ss_pred CCeeEEeeEEeccCCc---cCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEE-eeeeccc--c---cCCCCEEE
Confidence 3456999999998643 4456999999975 999999877543 5788888773 3443321 0 12346888
Q ss_pred EEecC-CCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 79 VYNKK-EKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 79 iyn~~-~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
|.... ...+.+.|.|.|.+|+..|+.||+.|+.+.++.
T Consensus 77 I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~ 115 (125)
T 1unq_A 77 IRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQ 115 (125)
T ss_dssp EEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcccc
Confidence 87643 456789999999999999999999998877554
No 33
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=6.9e-14 Score=110.71 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=74.9
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
.+.++|||++.|.+. ..-+++|||||+++.|.|||.. .+ ..|.+.+.|.+ |.|.....+. ....-|+|.|..
T Consensus 10 ~~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~-~~-~~~~g~i~L~~-~~v~~~~~~~-~~~~~~~F~i~~-- 81 (117)
T 2d9y_A 10 PVTKAGWLFKQASSG--VKQWNKRWFVLVDRCLFYYKDE-KE-ESILGSIPLLS-FRVAAVQPSD-NISRKHTFKAEH-- 81 (117)
T ss_dssp CCCEEEEEEEECTTS--SSCEEEEEEEEETTEEEEESST-TC-CSCCEEEECSS-CEEEECCTTT-TCCCSSEEEEEC--
T ss_pred CeeEEEEEEEeCCCC--CCCceEEEEEECCCEEEEECCC-CC-CCcCCEEEeCC-eEEEEcCccc-cCCCccEEEEEc--
Confidence 345999999998432 3456799999999999999854 33 48999999955 4455432211 123347888864
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
...+.+.|.|.|.+|+..|+.||+.|+..
T Consensus 82 ~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 110 (117)
T 2d9y_A 82 AGVRTYFFSAESPEEQEAWIQAMGEAARV 110 (117)
T ss_dssp SSSCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence 35688999999999999999999999643
No 34
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.52 E-value=5.6e-14 Score=112.42 Aligned_cols=103 Identities=17% Similarity=0.277 Sum_probs=79.6
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
..+.++|||++.|... .-+++|||||+++.|.|||... + ..|.+.+.|.+...|+....+. ....-++|.|..
T Consensus 12 ~~~~~~G~L~K~g~~~---~~Wk~R~fvL~~~~L~yy~~~~-~-~~~~g~i~l~~~~~v~~~~~~~-~~~~~~~F~i~~- 84 (125)
T 1eaz_A 12 SAVIKAGYCVKQGAVM---KNWKRRYFQLDENTIGYFKSEL-E-KEPLRVIPLKEVHKVQECKQSD-IMMRDNLFEIVT- 84 (125)
T ss_dssp CCCSEEEEEEEECTTT---CCEEEEEEEECSSEEEEESSTT-C-SSCSEEEEGGGCCEEEECTTHH-HHTCSSEEEEEC-
T ss_pred CCccEEEEEEEeCCCC---CCcceEEEEEeCCEEEEEcCCC-C-CcceeEEEcccceEEeeccccc-cCCcCCEEEEEe-
Confidence 3456999999998533 3466999999999999998653 3 4899999998887787632111 123357888884
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
..+.+.|.|.|.+|+..|+.||+.||...+
T Consensus 85 --~~r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 85 --TSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp --SSCEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred --CCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 468899999999999999999999986543
No 35
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=8.2e-14 Score=112.79 Aligned_cols=101 Identities=16% Similarity=0.241 Sum_probs=78.3
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecc--eeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR--LLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVY 80 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~--~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iy 80 (335)
.++.++|||++.|.... ..-+++|||||+++ .|.|||... +. .|.+++-|.+.+.|.+.. ..-+.|.|.
T Consensus 6 ~~~~~~G~L~K~g~~~~-~k~WkkRwfvL~~~~~~L~Yy~~~~-~~-~~~g~I~L~~~~~~~~~~------~~~~~F~i~ 76 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGP-IRGWKSRWFFYDERKCQLYYSRTAQ-DA-NPLDSIDLSSAVFDCKAD------AEEGIFEIK 76 (119)
T ss_dssp SCCCCEEEEEECSCSSS-SCCCEEEEEEEETTTTEEEEESSTT-CC-SCSEEEEGGGCEEEECTT------GGGCEEEEE
T ss_pred CCCcEEEEEEecCCCCC-CCCceeEEEEEECCccEEEEECCCC-Cc-ccccEEECCCCEEEecCC------CCCCEEEEE
Confidence 45569999999985211 23456999999999 999997553 33 899999997777776521 223588887
Q ss_pred ecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhh
Q 019797 81 NKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQE 115 (335)
Q Consensus 81 n~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~ 115 (335)
.. .+.+.|.|.|.+|+..||+||+.|+.+...
T Consensus 77 ~~---~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (119)
T 2dhk_A 77 TP---SRVITLKAATKQAMLYWLQQLQMKRWEFHN 108 (119)
T ss_dssp CS---SCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eC---CcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 64 789999999999999999999999765433
No 36
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.52 E-value=6.2e-14 Score=113.53 Aligned_cols=102 Identities=17% Similarity=0.359 Sum_probs=76.0
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecc--eeeecccCCCCCCCccEEEEecCceEEeeCCcce--ecCceeEEEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR--LLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKT--HHGHMVYVLS 78 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~--~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~--~hg~~~yvf~ 78 (335)
..+.++|||++.|...-+ +++|||||+++ .|.|||.. .+ ..|.+++.|.+ |.|+...... ...+.-++|.
T Consensus 16 ~~~~~~G~L~K~g~~~~~---Wk~R~fvL~~~~~~L~yy~~~-~~-~~~~g~i~L~~-~~v~~~~~~~~~~~~~~~~~F~ 89 (129)
T 1x05_A 16 GVIIKQGCLLKQGHRRKN---WKVRKFILREDPAYLHYYDPA-GA-EDPLGAIHLRG-CVVTSVESNSNGRKSEEENLFE 89 (129)
T ss_dssp SEEEEEEEEEECCSSCCC---CEEEEEEEEETTTEEEEECSS-CC-SSCSEEEECTT-CEEEECCCCCCSSSCSSCSEEE
T ss_pred CCceEEEEEEecCCCCCC---CeeEEEEEeCCCCEEEEECCC-CC-CcceeEEEccC-CEEEEccCCccccccCCCeEEE
Confidence 345699999999864333 56999999987 89999754 33 48999999955 6666432221 0123567899
Q ss_pred EEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 79 VYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 79 iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
|... ..+.+.|.|.|.+|+..|++||+.||..
T Consensus 90 i~~~--~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 90 IITA--DEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp EECT--TCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEcC--CCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 9864 3466999999999999999999999654
No 37
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.52 E-value=9e-14 Score=118.38 Aligned_cols=98 Identities=21% Similarity=0.377 Sum_probs=77.3
Q ss_pred CCceeeeEEEe--eecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEe
Q 019797 4 KVVYEGWMVRY--GRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 81 (335)
Q Consensus 4 ~~~~EGWly~~--g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn 81 (335)
++..+|||++. |.-+-|+. +|||||.++.|+|||... + .+|.+.+.| +|+.|.+..-... .--|.|.||+
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk---~rWFVLt~~~L~yyKd~~-e-ke~~G~IpL-~~~~vr~v~~~~~--~rk~~F~l~~ 82 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSK---EYWFVLTAENLSWYKDDE-E-KEKKYMLSV-DNLKLRDVEKGFM--SSKHIFALFN 82 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSE---EEEEEEESSEEEEESSTT-C-SCEEEEEEC-TTEEEEECCSCSS--SSCEEEEEEE
T ss_pred ceEEEEEEEEecCccccCCce---eeEEEEeccceeeecCCc-c-cccceEEEC-CCceEeccCCCCC--CCceEEEEEC
Confidence 36899999996 33333455 999999999999998766 3 489999999 7777777432222 3569999999
Q ss_pred cCC-----CcceEEEeecCHHHHHHHHHHHHHH
Q 019797 82 KKE-----KYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 82 ~~~-----~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
... +.++++|+|.|.||++.||.||..|
T Consensus 83 ~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 83 TEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 642 3579999999999999999999888
No 38
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.51 E-value=9.1e-14 Score=111.17 Aligned_cols=100 Identities=16% Similarity=0.304 Sum_probs=76.9
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
++.++|||++.|.+. ..-+++|||||+++.|.|||... + ..|.+.+.| .+|.|+...... ..+.-|+|.|...
T Consensus 10 ~~~~~G~L~K~~~~~--~~~WkkR~fvL~~~~L~yy~~~~-~-~~~~g~i~l-~~~~v~~~~~~~-~~~~~~~f~i~~~- 82 (123)
T 1upq_A 10 PVHIRGWLHKQDSSG--LRLWKRRWFVLSGHCLFYYKDSR-E-ESVLGSVLL-PSYNIRPDGPGA-PRGRRFTFTAEHP- 82 (123)
T ss_dssp CEEEEEEEEEECSSS--SCCEEEEEEEEETTEEEEESSTT-C-CSCCEEEEG-GGCEEEECCSSC-TTSSSSEEEEECT-
T ss_pred CceEEEEEEeeCCCC--CCCceeEEEEEeCCEEEEECCCC-C-cccceEEEC-CCCEEEECCCCc-cCCCcEEEEEECC-
Confidence 345999999998533 34577999999999999998544 3 389999998 556777653322 1234678888753
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
..+.+.|.|.|.+|+..|+.||+.|+.
T Consensus 83 -~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 83 -GMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp -TSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred -CCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 458899999999999999999999964
No 39
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.51 E-value=8.7e-14 Score=116.14 Aligned_cols=107 Identities=14% Similarity=0.229 Sum_probs=77.1
Q ss_pred CCceeeeEEEeeecc-cccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 4 KVVYEGWMVRYGRRK-IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 4 ~~~~EGWly~~g~~~-~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
.+.++|||++.|... +...-+++|||||+++.|.|||... + ..|.+.+.|.+++ |....-....++.-|+|.|...
T Consensus 16 ~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~-~-~~~~g~i~L~~~~-v~~~~~~~~~~~~~~~F~I~~~ 92 (148)
T 1u5f_A 16 FVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK-D-KQQKGEFAIDGYD-VRMNNTLRKDGKKDCCFEICAP 92 (148)
T ss_dssp SEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTT-C-SSCSEEEECTTCE-EEECTTSCSSTTGGGEEEEECT
T ss_pred CccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCC-C-cccceEEEcCCcE-EEECCCcccCCCCccEEEEECC
Confidence 345999999998653 2345678999999999999997543 3 4899999995555 5432111112233478999863
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhhhhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQHQE 115 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~ 115 (335)
..+.+.|.|.|.+|+..|++||+.||...+.
T Consensus 93 --~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 93 --DKRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp --TSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred --CCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 3589999999999999999999999765433
No 40
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.51 E-value=3e-14 Score=112.81 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=76.9
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEe--cceeeecccCCCCCCCccEEEEecCceEEeeC----CcceecCceeEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLE--SRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDR----GLKTHHGHMVYV 76 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~--g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~----Gre~~hg~~~yv 76 (335)
+.+.++|||++.|... .-+++|||||+ ++.|.|||... + ..|.+.+.|..++.|+.. |+.. ....-|+
T Consensus 6 ~~~~~~G~L~K~g~~~---~~Wk~R~fvL~~~~~~L~yy~~~~-~-~~~~g~i~L~~~~~v~~~~~~~~~~~-~~~~~~~ 79 (117)
T 1v5u_A 6 SGRSYEGILYKKGAFM---KPWKARWFVLDKTKHQLRYYDHRM-D-TECKGVIDLAEVEAVAPGTPTIGAPK-TVDEKAF 79 (117)
T ss_dssp CSSSEEEEEEECCCSS---SCCEEEEEEEETTTTEEEEESSSS-C-SSCCCEEEGGGEEEEECCCCCTTSCS-SSCTTTC
T ss_pred CCccEEEEEEecCCCC---CCceeeEEEEECCCCEEEEeecCC-C-CccceEEEccCcEEEeecCccccccc-cCCCCeE
Confidence 4566999999998653 44669999999 88999998543 3 379999999877777642 2211 1122367
Q ss_pred EEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 77 LSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 77 f~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
|.|.. ..+.+.|.|.|.+|+..|++||+.||.+
T Consensus 80 F~i~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 80 FDVKT---TRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp EEEEE---SSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred EEEEC---CCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 88854 5789999999999999999999999643
No 41
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.49 E-value=1.9e-13 Score=117.91 Aligned_cols=108 Identities=17% Similarity=0.203 Sum_probs=82.5
Q ss_pred CCCCceeeeEEEeeecc--cccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcc--eecCceeEEE
Q 019797 2 SSKVVYEGWMVRYGRRK--IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLK--THHGHMVYVL 77 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~--~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre--~~hg~~~yvf 77 (335)
...+.+||||++.|.++ ++..-+++|||||+++.|.|||.+... ..|.+++.|...+.|+....+ ...-..-+.|
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~-~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f 90 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK-KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPF 90 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS-CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEE
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc-cccccEEEEeeeEEEEeccccccCcccccceeE
Confidence 34566999999998764 455567899999999999999865433 478889999777777653222 1122455788
Q ss_pred EEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 78 SVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 78 ~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.|... .+.+-|.|.|.+|+..||+||+++|...
T Consensus 91 ~i~t~---~rt~~l~A~s~~e~~~Wi~aL~~~i~~n 123 (164)
T 2lul_A 91 QVVHD---ANTLYIFAPSPQSRDLWVKKLKEEIKNN 123 (164)
T ss_dssp EEECS---SCEEEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred EEecC---CcEEEEECCCHHHHHHHHHHHHHHHHHC
Confidence 88754 5789999999999999999999997653
No 42
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.4e-13 Score=109.07 Aligned_cols=97 Identities=10% Similarity=0.136 Sum_probs=73.0
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
.+.++|||++.|.. ...-+++|||||+++.|.|||.+. ..|.+.+++ -+|.|+..- ..-++|.|..
T Consensus 9 ~~~~~G~L~K~~~~--~~k~WkkR~fvL~~~~L~yyk~~~---~~~~~~i~l-~~~~v~~~~------~~~~~F~I~~-- 74 (114)
T 2da0_A 9 GSEKKGYLLKKSDG--IRKVWQRRKCSVKNGILTISHATS---NRQPAKLNL-LTCQVKPNA------EDKKSFDLIS-- 74 (114)
T ss_dssp CSCEEEEEEEECSS--SCCCEEEEEEEEETTEEEECCSSC---CSCCEEEET-TTSEEEECS------SSSSCEEEEE--
T ss_pred CccEEEEEEEeCCC--CCCCceeEEEEEeCCEEEEEcCCC---CCCCCEEEe-eeeEEEECC------CCCCEEEEEc--
Confidence 45699999999953 124567999999999999998743 256666555 455565321 1125888884
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHhhhhh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVIDQHQE 115 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~ 115 (335)
..+.+.|.|.|.+|+..|+.||+.||.+...
T Consensus 75 -~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 75 -HNRTYHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp -TTEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCcEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999876543
No 43
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.47 E-value=9.2e-14 Score=112.27 Aligned_cols=102 Identities=23% Similarity=0.347 Sum_probs=74.2
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEe--cceeeecccCCCCCCCccEEEEecCceEEeeCCcc--e---ecCceeEE
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLE--SRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLK--T---HHGHMVYV 76 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~--g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre--~---~hg~~~yv 76 (335)
.+.++|||++.|.. ..-+++|||||+ +..|.|||....+. .|.+.+.|.+ |.|...... . .....-|+
T Consensus 17 ~~~~~G~L~K~g~~---~~~Wk~R~fvL~~d~~~L~yy~~~~~~~-~~~g~i~L~~-~~v~~~~~~~~p~~~~~~~~~~~ 91 (129)
T 1x1g_A 17 TVVKQGYLAKQGHK---RKNWKVRRFVLRKDPAFLHYYDPSKEEN-RPVGGFSLRG-SLVSALEDNGVPTGVKGNVQGNL 91 (129)
T ss_dssp EEEEEEEEEEECSS---SSSEEEEEEEEEESSCEEEEECSSSCCS-SCSCCEESTT-CCCEECCSSSSCSSCSSCCCSSC
T ss_pred CEEEEEEEEEECCC---CCCeeeEEEEEeCCCCeEEEeCCCCcCC-ccceEEECcC-CEEEEeCCCCCcccccCCCCCce
Confidence 45599999999865 444569999999 46999888653444 8999999955 555432111 0 00013578
Q ss_pred EEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 77 LSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 77 f~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
|.|... ..+.+.|.|.|.+|+..|++||+.||.+
T Consensus 92 F~I~~~--~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 92 FKVITK--DDTHYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp EEECCT--TCCCEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred EEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 888754 3467999999999999999999999654
No 44
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.47 E-value=2e-13 Score=117.73 Aligned_cols=98 Identities=12% Similarity=0.144 Sum_probs=75.7
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
++.+||||++.|.. ..-+++|||||+|+.|.|||++. +. .|.+.+.|..++.|.+...+ .+.-+.|+|..
T Consensus 17 pv~keG~L~Kkg~~---~k~WkrRWFvLk~~~L~Yyk~~~-d~-~~~g~I~L~~~~~~~~~~~~---~~~~~~F~I~t-- 86 (149)
T 1x1f_A 17 PLYFEGFLLIKRSG---YREYEHYWTELRGTTLFFYTDKK-SI-IYVDKLDIVDLTCLTEQNST---EKNCAKFTLVL-- 86 (149)
T ss_dssp CEEEEEEEEEECTT---CCSCEEEEEEEETTEEEEESCSS-CS-SCSEECCCSSCCEEEECCCT---TSCCCEEEEEC--
T ss_pred CccEEEEEEEeCCC---CCCceeEEEEEcCCEEEEEeCCC-cc-ccCcEEECCCceEEeeccCC---CCcCcEEEEEc--
Confidence 35699999999953 35677999999999999998653 33 78899999777777442111 11247888875
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
..+.+.|.|.|.||+..||+||+.++..
T Consensus 87 -~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 87 -PKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp -SSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred -CCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 3578999999999999999999999653
No 45
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.47 E-value=3.6e-13 Score=111.69 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=75.8
Q ss_pred CCCceeeeEEEe----eecccccccceeeEEEEecceeeecccCCC---------CCCCccEEEEecCceEEeeCCccee
Q 019797 3 SKVVYEGWMVRY----GRRKIGRSFIHMRYFVLESRLLAYYKKKPQ---------DNQVPIKTLLIDGNCRVEDRGLKTH 69 (335)
Q Consensus 3 ~~~~~EGWly~~----g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~---------~~~~Pirs~vid~~~rVed~Gre~~ 69 (335)
..+.+||||++. |-.++. .-+++|||||+|+.|.|||+... ....|.+.+-| .+|.|+.-..++
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~-k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L-~~~~v~~~~~~~- 86 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLR-KNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDL-RGAALAHGRHLS- 86 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECC-CCCEEEEEEEESSEEEEESCC--------------CCSEEEEC-TTCEEEECTTSC-
T ss_pred cceeEEEEEEEeeeccCCCcCC-CCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEe-CCcEEEECCCCC-
Confidence 455699999996 223332 55779999999999999997731 12489999999 566776421111
Q ss_pred cCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 70 HGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 70 hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.--++|+|.. ...+.+-|.|.|.+|+..|++||+.||.++
T Consensus 87 --kr~~~F~l~t--~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 87 --SRRNVLHIRT--IPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp --SSSSEEEEEC--TTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcEEEEEc--CCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 2346888863 445778999999999999999999998764
No 46
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.47 E-value=2.2e-13 Score=118.69 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=78.9
Q ss_pred CCceeeeEEEeeecc--cccccceeeEEEEecceeeecccC---CCCCCCccEEEEecCceEEeeCC--cceecCce---
Q 019797 4 KVVYEGWMVRYGRRK--IGRSFIHMRYFVLESRLLAYYKKK---PQDNQVPIKTLLIDGNCRVEDRG--LKTHHGHM--- 73 (335)
Q Consensus 4 ~~~~EGWly~~g~~~--~g~q~~~~RyFVL~g~~l~~YK~~---P~~~~~Pirs~vid~~~rVed~G--re~~hg~~--- 73 (335)
.+.+||||++.|.++ ++..-+++|||||+++.|.|||.. +.+ ..|.+++.|.+.+.|+... -+.--+..
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~-~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~ 80 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRR-GSKKGSIDVEKITCVETVVPEKNPPPERQIPR 80 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEE-EEEEEEEEGGGEEEEEECCCCSSCCGGGCC--
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCC-CceeeEEECcceEEEEeccCCCCcchhccccc
Confidence 466999999987654 556668899999999999999974 223 4899999997777676431 11100000
Q ss_pred -----------------eEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 74 -----------------VYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 74 -----------------~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
.|+|.|... .+.+-|.|.|.+|+..||+||+.||.
T Consensus 81 ~~~~~~~~~~~~i~~~~~~~F~I~t~---~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 81 RGEESSEMEQISIIERFPYPFQVVYD---EGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp -------CCTTHHHHCCCEEEEEEET---TCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccCcccccccccccccccccEEEEeC---CceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 189999864 37899999999999999999999965
No 47
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.47 E-value=1.5e-13 Score=108.73 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=72.8
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEE-ecceeeecccCCCCCCCccEEEEecCce-------EEeeCCcceecCce
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVL-ESRLLAYYKKKPQDNQVPIKTLLIDGNC-------RVEDRGLKTHHGHM 73 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL-~g~~l~~YK~~P~~~~~Pirs~vid~~~-------rVed~Gre~~hg~~ 73 (335)
...+.++|||++.|.. ..-+++||||| +++.|.|||.... ..|.+.+.+..+| .|++-..+. ....
T Consensus 2 ~~~~~~~G~L~K~g~~---~k~WkkR~fvL~~~~~L~yyk~~~~--~~~~g~i~l~~~~i~l~~~~~v~~v~~~~-~~~~ 75 (112)
T 3aj4_A 2 SMAFVKSGWLLRQSTI---LKRWKKNWFDLWSDGHLIYYDDQTR--QNIEDKVHMPMDCINIRTGQECRDTQPPD-GKSK 75 (112)
T ss_dssp CCSCSEEEEEEEECSS---SCCEEEEEEEECTTSEEEEESSTTC--CSEEEEEEHHHHEEEEEEGGGCCSCCCST-TCCG
T ss_pred CcceeEEEEEEeeCCC---CCCeeceEEEEeeCCEEEEEcCCCC--CCCCccccccccceeecccccccccCCCC-CCCc
Confidence 3567799999999863 34567999999 9999999986553 3677777665554 333200000 0112
Q ss_pred eEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 74 VYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 74 ~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
.|.|.|.. .+.+.+.|.|.|.+|+..|++||+.|+
T Consensus 76 ~~~F~i~~--~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 76 DCMLQIVC--RDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp GGEEEEEE--TTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEe--cCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 57888874 347899999999999999999999993
No 48
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.46 E-value=2.1e-13 Score=106.12 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=67.9
Q ss_pred eeeeEEEeeec-----ccccccceeeEEEEecceeeecccCCC----CCCCccEEEEecCceEEeeCCcceecCceeEEE
Q 019797 7 YEGWMVRYGRR-----KIGRSFIHMRYFVLESRLLAYYKKKPQ----DNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVL 77 (335)
Q Consensus 7 ~EGWly~~g~~-----~~g~q~~~~RyFVL~g~~l~~YK~~P~----~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf 77 (335)
|||||++.+.. +-+..-+++|||||+|+.|.|||.... ....|...+-+ .+|.|+..-. ..+--++|
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l-~~~~~~~~~~---~~~~~~~F 76 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSL-KEAICEVALD---YKKKKHVF 76 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEEC-TTCEEEECSS---CCSSSSEE
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEEC-CCCEEEEccc---ccCCccEE
Confidence 79999999831 134555779999999999999986542 11234444555 3444442111 11234789
Q ss_pred EEEecCCCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 78 SVYNKKEKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 78 ~iyn~~~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
.|.. ...+.+.|.|.|.+|+..|+.||+.|
T Consensus 77 ~i~~--~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 77 KLRL--SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp EEEC--TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred EEEe--cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 9874 35689999999999999999999876
No 49
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.46 E-value=2.7e-13 Score=111.75 Aligned_cols=95 Identities=13% Similarity=0.048 Sum_probs=74.2
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEEecc---eeeecccCCCCCCCccEEEEecCceEEee--CCcceecCceeEE
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR---LLAYYKKKPQDNQVPIKTLLIDGNCRVED--RGLKTHHGHMVYV 76 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~---~l~~YK~~P~~~~~Pirs~vid~~~rVed--~Gre~~hg~~~yv 76 (335)
+....+.|||++.+. .- -+.+|||||+++ .|.|||.. .|. .|++++.| .+|.|.. .+.+. .--|+
T Consensus 5 ~~~~~~~G~L~k~~~-~~---~WkkrWfVL~~~~~~~Ly~Yk~~-~d~-~p~g~I~L-~g~~V~~~~~~~~~---~~~~~ 74 (112)
T 2coc_A 5 SSGSLLCGPLRLSES-GE---TWSEVWAAIPMSDPQVLHLQGGS-QDG-RLPRTIPL-PSCKLSVPDPEERL---DSGHV 74 (112)
T ss_dssp CSSSSSEEEEEEESS-SS---CEEEEEEECCTTCTTCEEEECCT-TCS-SSCSEECG-GGCEEECCCSSSCC---SSSEE
T ss_pred cCCceEEEEEEecCC-CC---CceEEEEEEECCCccEEEEECCC-Ccc-CcceEEEc-CCCEEEecCccccc---CCCCE
Confidence 345568999999653 22 366999999996 68878744 454 89999999 7888883 33333 35689
Q ss_pred EEEEecCCCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 77 LSVYNKKEKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 77 f~iyn~~~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
|.|.. ..+.+.|+|.|.|++.+||+||+.|
T Consensus 75 Fki~~---~~~~y~f~A~s~e~~~~Wl~al~~A 104 (112)
T 2coc_A 75 WKLQW---AKQSWYLSASSAELQQQWLETLSTA 104 (112)
T ss_dssp EEEEE---TTEEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEec---CCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 99993 3578999999999999999999998
No 50
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.45 E-value=4.5e-13 Score=108.42 Aligned_cols=97 Identities=16% Similarity=0.306 Sum_probs=72.9
Q ss_pred eeeeEEEe-eecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCc-eE--EeeCCcceecCceeEEEEEEec
Q 019797 7 YEGWMVRY-GRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGN-CR--VEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 7 ~EGWly~~-g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~-~r--Ved~Gre~~hg~~~yvf~iyn~ 82 (335)
+||||.++ |.++.+..-+++|||||+|+.|.|||.. .+ ..|++++-|.+. |. +.. ....--++|.|...
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~-~~-~~p~~~i~l~~~~~~~~~~~-----~~~~r~~~F~l~~~ 74 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDR-TD-VIPLLSVNMGGEQCGGCRRA-----NTTDRPHAFQVILS 74 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSS-SC-CSCSEEEETTC-CEEEEEEC-----CCSSCTTEEEEEET
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCC-CC-CCccceEEecCCEEEeeecc-----CCCCCCeEEEEEcC
Confidence 79999977 5556677888899999999999999865 33 378888777533 44 111 11234568998764
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
..+.+.|.|.|.||+..||+||..||.+
T Consensus 75 --~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 75 --DRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp --TSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred --CCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 3457899999999999999999999654
No 51
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.44 E-value=2.1e-13 Score=110.27 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=74.4
Q ss_pred CCCceeeeEEEeeec-----ccccccceeeEEEEecceeeecccCCCCC--CC--ccEEEEecCceEEeeCCcceecCce
Q 019797 3 SKVVYEGWMVRYGRR-----KIGRSFIHMRYFVLESRLLAYYKKKPQDN--QV--PIKTLLIDGNCRVEDRGLKTHHGHM 73 (335)
Q Consensus 3 ~~~~~EGWly~~g~~-----~~g~q~~~~RyFVL~g~~l~~YK~~P~~~--~~--Pirs~vid~~~rVed~Gre~~hg~~ 73 (335)
..+.+||||++.+.. +.+..-+++|||||+++.|.|||...... .. |...+-+ .+|.|+.-- + ..+-
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l-~~~~~~~~~-~--~~~r 81 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSL-ARAQGSVAF-D--YRKR 81 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEEC-TTCEEEECT-T--CSSC
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEc-cCcEEeecc-c--ccCC
Confidence 456799999999864 33466678999999999999998654221 12 3333444 335555321 1 1234
Q ss_pred eEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 74 VYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 74 ~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
-|+|+|... ..+.+.|.|.|.+|+..|++||+.||.+.
T Consensus 82 ~~~F~i~~~--~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~ 119 (123)
T 1wjm_A 82 KHVFKLGLQ--DGKEYLFQAKDEAEMSSWLRVVNAAIASG 119 (123)
T ss_dssp SSEEEEECS--SSCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEc--CCcEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 578998753 45789999999999999999999997643
No 52
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=1.2e-12 Score=107.82 Aligned_cols=102 Identities=22% Similarity=0.293 Sum_probs=71.4
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEE-ecceeeecccCCCCCCCccEEEEecCceE-EeeCCcc------eecCce
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVL-ESRLLAYYKKKPQDNQVPIKTLLIDGNCR-VEDRGLK------THHGHM 73 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL-~g~~l~~YK~~P~~~~~Pirs~vid~~~r-Ved~Gre------~~hg~~ 73 (335)
.+.+.+||||++.|... .-+++||||| +++.|.|||... +. .|.+.+.+...|. |.. |.+ .-....
T Consensus 5 ~~~v~~~G~L~K~g~~~---k~WkkRwFVL~~~~~L~Yyk~~~-~~-~~~g~i~l~~~~~~i~~-~~~~~~v~~~~~~~~ 78 (130)
T 2d9v_A 5 SSGLVRGGWLWRQSSIL---RRWKRNWFALWLDGTLGYYHDET-AQ-DEEDRVVIHFNVRDIKV-GQECQDVQPPEGRSR 78 (130)
T ss_dssp CCCEEEEEEEEEECSSS---CCEEEEEEEEETTTEEEEESSSS-TT-SEEEEEECTTTEEEEEE-GGGCSSCCCCSSCCT
T ss_pred CCceeEEEEEEeecCcc---CCceeeEEEEccCCEEEEEeCCC-CC-CcCceEecccceeEEec-cccccccCCCCCCCc
Confidence 34566999999998633 3466999999 899999998654 22 5777776654442 211 100 001123
Q ss_pred eEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 74 VYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 74 ~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
-|.|.|... ..+.+.|.|.|.+|+..||+||+.|+.
T Consensus 79 ~~~F~I~~~--~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 79 DGLLTVNLR--EGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp TTEEEEEET--TSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEeC--CCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 468888763 346899999999999999999999954
No 53
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.43 E-value=5.8e-13 Score=112.96 Aligned_cols=101 Identities=21% Similarity=0.245 Sum_probs=79.7
Q ss_pred ceeeeEEEe-----eecccccccceeeEEEEecceeeecccCC---CC----CCCccEEEEecCceEEeeCCcceecCce
Q 019797 6 VYEGWMVRY-----GRRKIGRSFIHMRYFVLESRLLAYYKKKP---QD----NQVPIKTLLIDGNCRVEDRGLKTHHGHM 73 (335)
Q Consensus 6 ~~EGWly~~-----g~~~~g~q~~~~RyFVL~g~~l~~YK~~P---~~----~~~Pirs~vid~~~rVed~Gre~~hg~~ 73 (335)
.|+|+|++. |.+ .....+.+|||||.||.|.||+.+. .+ ..+|.+.+.| .||+|+. .+ +...
T Consensus 2 ~~~G~L~rk~llK~G~k-~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L-~g~~V~~--~e--~~~~ 75 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRK-PALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSI-VGWMVQL--PD--DPEH 75 (126)
T ss_dssp CEEEEEEEEEEEBTTBC-CSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEEC-TTCEEEC--CC--CTTS
T ss_pred ceeeeeeeeehhhcCCc-ccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEe-CCCEEEe--cC--CCCC
Confidence 589999976 433 2246677999999999999999663 11 1489999999 9999983 22 2245
Q ss_pred eEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 74 VYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 74 ~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.++|.|++. +..+.+.|.|.|.++|+.|++||..||...
T Consensus 76 ~~~F~L~~~-~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~ 114 (126)
T 2dtc_A 76 PDIFQLNNP-DKGNVYKFQTGSRFHAILWHKHLDDACKSS 114 (126)
T ss_dssp TTEEEEECT-TSCSEEEEECSSHHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEeeC-CCCCEEEEeCCCHHHHHHHHHHHHHHHhcC
Confidence 789999975 456779999999999999999999997543
No 54
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.41 E-value=6.1e-13 Score=113.16 Aligned_cols=105 Identities=16% Similarity=0.182 Sum_probs=66.4
Q ss_pred CCceeeeEEEeee-----cc--cccccceeeEEEEecceeeecccCCCCCCCccEEEEecC-ceEEeeCCcceecCceeE
Q 019797 4 KVVYEGWMVRYGR-----RK--IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDG-NCRVEDRGLKTHHGHMVY 75 (335)
Q Consensus 4 ~~~~EGWly~~g~-----~~--~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~-~~rVed~Gre~~hg~~~y 75 (335)
.+.+||||+++.. .+ -+..-+++|||||+++.|.|||.+......|.+.+.|+. +|.|+-...+ .+.-|
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~---~~~~~ 78 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSE---TKRKN 78 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSS---CSCSS
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEecccc---CCCCC
Confidence 4679999995420 01 133447799999999999999876543346777766654 2444321111 13347
Q ss_pred EEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 76 VLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 76 vf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
+|.|... ++.+.|.|.|.+|+..||.||+.|+....
T Consensus 79 ~F~I~t~---~r~~~l~A~s~~e~~~Wi~ai~~~~~~~~ 114 (168)
T 2j59_M 79 VFRLTTS---DCECLFQAEDRDDMLAWIKTIQESSNLNE 114 (168)
T ss_dssp EEEEECS---SCEEEEECSSHHHHHHHHHHHHHHCCCCH
T ss_pred EEEEEeC---CceEEEEcCCHHHHHHHHHHHHHHHhcCc
Confidence 8999864 27899999999999999999999976543
No 55
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.38 E-value=2.1e-12 Score=116.29 Aligned_cols=103 Identities=15% Similarity=0.262 Sum_probs=78.4
Q ss_pred CceeeeEEEeeecc-cccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 5 VVYEGWMVRYGRRK-IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 5 ~~~EGWly~~g~~~-~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
+.++|||++.|... +...-+++|||||+++.|.|||... + ..|.+.+.|.+++.|...-. ...++.-|+|.|...
T Consensus 106 v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~-~-~~p~g~I~L~~~~~v~~~~~-~~~~~k~~~F~I~t~- 181 (211)
T 1u5e_A 106 VIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDK-D-KQQKGEFAIDGYDVRMNNTL-RKDGKKDCCFEICAP- 181 (211)
T ss_dssp EEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTT-C-SSCSEEEECTTCEEEECGGG-CSSTTGGGEEEEECS-
T ss_pred ccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCC-C-ccceEEEEeCCcEEEEcCCc-cccCCCCCEEEEEcC-
Confidence 56999999999642 2345577999999999999998654 3 48999999977776653100 011233478888863
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
..+.+.|.|.|.+|+..||+||+.||..
T Consensus 182 -~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 182 -DKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp -SSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred -CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999764
No 56
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.37 E-value=2.7e-12 Score=112.18 Aligned_cols=98 Identities=22% Similarity=0.269 Sum_probs=77.3
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCC----------------------C----------CCc----
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD----------------------N----------QVP---- 49 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~----------------------~----------~~P---- 49 (335)
.++||||+.+...-.++ +|||||.++.|.|++..-.+ + .+|
T Consensus 2 ~k~G~L~~~~~~~~~w~---~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWY---PHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp CEEEEEEEEETTTTEEE---EEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSS
T ss_pred CcceEEEeecCCCCCce---EeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhc
Confidence 47999999998777777 99999999999988822111 0 122
Q ss_pred -----------cEEEEecCceEEeeC-CcceecCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 50 -----------IKTLLIDGNCRVEDR-GLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 50 -----------irs~vid~~~rVed~-Gre~~hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
.+++.| .+|+|+.. +.+. .-.|||+|-......+.+.|||.|.||+..||+||++|+
T Consensus 79 l~E~~~lG~l~kG~IdL-~gc~V~~~~~~~~---~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDV-PACQIAIRPEGKN---NRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp SCTTTTTTTCCCEEECS-TTCEEEEETTCSS---SCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccccccccccccceEec-CccEEEeccCCCC---CCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 577777 88888863 1222 478999998887778899999999999999999999993
No 57
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.35 E-value=3.1e-12 Score=115.75 Aligned_cols=99 Identities=16% Similarity=0.264 Sum_probs=80.5
Q ss_pred CCCceeeeEEEeeec--ccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEE
Q 019797 3 SKVVYEGWMVRYGRR--KIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVY 80 (335)
Q Consensus 3 ~~~~~EGWly~~g~~--~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iy 80 (335)
..+.++|||++.|.. +++..-+++|||||+++.|.|||.... ..|.+++.|.++..|++... .-|+|.|.
T Consensus 56 ~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~I~L~~~~~v~~~~~------k~~~F~I~ 127 (228)
T 3tfm_A 56 QEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE--EKLKGTVEVRSAKEIIDNTN------KENGIDII 127 (228)
T ss_dssp CCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC--CSEEEEEEGGGCSEEEEETT------TTSEEEEE
T ss_pred CCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC--cceeEEEEcCCCEEeccCCC------CCcEEEEE
Confidence 345699999999974 355567789999999999999986543 48999999988777776431 23678886
Q ss_pred ecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 81 NKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 81 n~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
. ..+.+.|.|.|.+|+..|++||+.||..
T Consensus 128 t---~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 128 M---ADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp C---SSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred c---CCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 5 4689999999999999999999999864
No 58
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.32 E-value=9.2e-12 Score=115.89 Aligned_cols=105 Identities=16% Similarity=0.171 Sum_probs=77.4
Q ss_pred CCCceeeeEEEeeec------c---cccccceeeEEEEecceeeecccCCC----CCCCccEEEEecCceEEeeCCccee
Q 019797 3 SKVVYEGWMVRYGRR------K---IGRSFIHMRYFVLESRLLAYYKKKPQ----DNQVPIKTLLIDGNCRVEDRGLKTH 69 (335)
Q Consensus 3 ~~~~~EGWly~~g~~------~---~g~q~~~~RyFVL~g~~l~~YK~~P~----~~~~Pirs~vid~~~rVed~Gre~~ 69 (335)
+.+.++|||++...- + .|..-+++|||||+|+.|.|||.++. .+..|.+.+.|. +|.|+......
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~-~~~v~~~~~~~- 86 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAE-DSIVQSVPEHP- 86 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECT-TCEEEECTTCS-
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcC-CcEEEECCcCC-
Confidence 456799999943321 1 12456789999999999999998642 225899999995 66666421111
Q ss_pred cCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 70 HGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 70 hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.--|+|.|... ..+.+.|.|.|.+|+..||+||+.|+...
T Consensus 87 --kk~~~F~I~t~--~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 87 --KKEHVFCLSNS--CGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp --SCSSEEEEECT--TSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEEcC--CCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 23578999864 56789999999999999999999998655
No 59
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=5.4e-12 Score=108.92 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=88.7
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.|+.++||=..+..++++--.++|||||+|+.|.|||++.....+||+.+.+ .+|+|++. .++ .+--|.|+|--.
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L-~gceV~pd--~~~-~~~kf~ikl~iP 82 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNL-KGCEVVPD--VNV-SGQKFCIKLLVP 82 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCT-TTCEEEEC--CBG-GGTBEEEEEEEE
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhccCCCceEEEC-CCCEEecc--ccc-cCCceEEEEEcc
Confidence 45789999999999999988888999999999999999888654589999999 88999974 322 345678777765
Q ss_pred -CCCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 83 -KEKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 83 -~~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
.++.+.+-|.|.|.++.++||.|++.|
T Consensus 83 s~~g~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 83 SPEGMSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp CSSSEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHHHh
Confidence 467799999999999999999999999
No 60
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.31 E-value=2e-12 Score=105.01 Aligned_cols=104 Identities=15% Similarity=0.143 Sum_probs=73.3
Q ss_pred CCCceeeeEEEeeec-----ccccccceeeEEEEecceeeecccCCCCCC---Ccc---EEEEecCceEEeeCCcceecC
Q 019797 3 SKVVYEGWMVRYGRR-----KIGRSFIHMRYFVLESRLLAYYKKKPQDNQ---VPI---KTLLIDGNCRVEDRGLKTHHG 71 (335)
Q Consensus 3 ~~~~~EGWly~~g~~-----~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~---~Pi---rs~vid~~~rVed~Gre~~hg 71 (335)
.++.+||||++++.- +.+..-+++|||||+|+.|.|||....... .|+ +++-| .+|.|+.--.. .
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L-~~~~v~~~~d~---~ 81 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDL-QNAAIEIASDY---T 81 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCC-SSCCCEECCSS---S
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEEC-CCCEEEeCCCC---C
Confidence 467799999998652 235667889999999999999987653221 222 34445 44555431111 1
Q ss_pred ceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 72 HMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 72 ~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
+--++|+|.. ...+.+.|.|.|.+|+..|++||+.||..
T Consensus 82 kr~~~F~l~t--~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 82 KKKHVLRVKL--ANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp SSTTEEEEEC--SSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEE--cCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 2356888872 45688999999999999999999999764
No 61
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.27 E-value=3.4e-11 Score=99.11 Aligned_cols=105 Identities=13% Similarity=0.166 Sum_probs=73.3
Q ss_pred CCCceeeeEEEeee----cccccccceeeEEEEecceeeecccCCCCC----------CCccEEEEecCceEEeeCCcce
Q 019797 3 SKVVYEGWMVRYGR----RKIGRSFIHMRYFVLESRLLAYYKKKPQDN----------QVPIKTLLIDGNCRVEDRGLKT 68 (335)
Q Consensus 3 ~~~~~EGWly~~g~----~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~----------~~Pirs~vid~~~rVed~Gre~ 68 (335)
..+.+||||+++.. .+.+..-+++|||||+|+.|.+||+..... ..|...+-| .+|.|+.--.+.
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L-~~a~v~~~~~d~ 84 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVEL-RGATLSWAPKDK 84 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEEC-TTCEEEECCGGG
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEc-CCCEEEeccccc
Confidence 45679999999832 233545678999999999999999755332 157777776 667777531011
Q ss_pred ecCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 69 HHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 69 ~hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
.+--+||.|-. ...+.+.|.|.|.+|+..|++||..||.+
T Consensus 85 --~krk~vF~l~t--~~~~~ylfqA~s~~e~~~Wi~aI~~aI~~ 124 (124)
T 3pp2_A 85 --SSRKNVLELRS--RDGSEYLIQHDSEAIISTWHKAIAQGIQE 124 (124)
T ss_dssp --CSSSSEEEEEC--TTSCEEEEECSCHHHHHHHHHHHHHHHC-
T ss_pred --CCCceEEEEEC--CCCCEEEEECCCHHHHHHHHHHHHHHHhC
Confidence 12245788764 34578999999999999999999999853
No 62
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.27 E-value=1.2e-11 Score=112.54 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=73.4
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC-CCccEEEEecCceEEee--CCcceecCceeEEEEEE
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN-QVPIKTLLIDGNCRVED--RGLKTHHGHMVYVLSVY 80 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~-~~Pirs~vid~~~rVed--~Gre~~hg~~~yvf~iy 80 (335)
.++++||||+.|.++-+++ +|||||+++.|.|||...... ...|...-+ ..|.|.. .+++......-|+|+|.
T Consensus 167 ~p~~~G~L~k~~~~~k~Wk---kR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l-~~~~v~~~~~~~~~~~~~~~~~F~i~ 242 (291)
T 3tca_A 167 VPELEGALYLKEDGKKSWK---RRYFLLRASGIYYVPKGKTKTSRDLACFIQF-ENVNIYYGIQCKMKYKAPTDHCFVLK 242 (291)
T ss_dssp CCCCEEEEEEECTTSSCEE---EEEEEECSSEEEECCTTCCSSTTTCEEEEEG-GGCEEEEECSHHHHHCCSSSCEEEEE
T ss_pred CCceEEEEEEeCCCCCCce---EEEEEEeCCEEEEEecCccccccCceeeccc-eeEEEEecCccccccCCCCCeEEEEE
Confidence 4679999999998776655 999999999999998655333 222332333 3344432 23444444567899998
Q ss_pred ecC---CCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 81 NKK---EKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 81 n~~---~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
... ...+.+-|+|.|.+|+..||.||+.|.
T Consensus 243 ~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 243 HPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp CTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 543 334678899999999999999999984
No 63
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.26 E-value=2e-11 Score=117.23 Aligned_cols=99 Identities=20% Similarity=0.359 Sum_probs=77.3
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCC
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKE 84 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~ 84 (335)
+.++|||++.|...-+ +++|||||+++.|.|||... + ..|.+.+.|. +|.|..... ...-|+|.|+....
T Consensus 213 ~~k~G~L~K~g~~~k~---WkkRwFVL~~~~L~Yyk~~~-~-~~p~G~I~L~-~~~v~~~~~----~~~~~~F~I~~~~~ 282 (347)
T 2r09_A 213 PDREGWLLKLGGRVKT---WKRRWFILTDNCLYYFEYTT-D-KEPRGIIPLE-NLSIREVED----PRKPNCFELYNPSH 282 (347)
T ss_dssp CCEEEEEEEECSSSCC---EEEEEEEEETTEEEEESSTT-C-SSCSEEEECT-TCEEEEECC----SSCSSEEEEECSSS
T ss_pred cccCCeeEecCCCccc---ceeEEEEEcCCEEEEEcCCC-c-cCCcEEEEcC-CeEEEEccC----CCCCCEEEEEeCCc
Confidence 5799999999876444 55999999999999998543 4 4899999995 555665211 23457899987532
Q ss_pred -------------------CcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 85 -------------------KYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 85 -------------------~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
+.+.+.|.|.|.+|+..|++||+.||.+.
T Consensus 283 ~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 283 KGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp TTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 25889999999999999999999998654
No 64
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.23 E-value=3.2e-11 Score=117.67 Aligned_cols=103 Identities=17% Similarity=0.310 Sum_probs=77.0
Q ss_pred CCCceeeeEEEeeecc-cccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEE---eeCCcceecC-ceeEEE
Q 019797 3 SKVVYEGWMVRYGRRK-IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRV---EDRGLKTHHG-HMVYVL 77 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~-~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rV---ed~Gre~~hg-~~~yvf 77 (335)
..+.++|||++.|... -+ +++|||||+++.|.|||.. .+. .|.+++.|+..+.| .+.-.....+ +--|.|
T Consensus 267 ~~~~k~G~L~K~g~~~~k~---WKkRwFVL~~~~L~YYk~~-~d~-~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F 341 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEG---FRKRWFTMDDRRLMYFKDP-LDA-FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGI 341 (386)
T ss_dssp CCCSEEEEEEECCTTSCSC---CEEEEEEEETTEEEEESST-TCS-BCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEE
T ss_pred cccceeeeEEEECCCCCCC---CcccEEEEECCEEEEEecC-CCc-ccceEEEeecceeeeeecccCCccccccCCCcEE
Confidence 3456999999998654 34 4599999999999999864 344 89999999665443 3311111111 115899
Q ss_pred EEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 78 SVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 78 ~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.|... .+.+.|.|.|.+|+..|++||+.||+++
T Consensus 342 ~I~t~---~rty~l~A~s~~e~~~Wi~aL~~~i~~p 374 (386)
T 3lju_X 342 TIVTP---DRKFLFACETESDQREWVAAFQKAVDRP 374 (386)
T ss_dssp EEECS---SCEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred EEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 99854 4899999999999999999999998774
No 65
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.22 E-value=1.8e-11 Score=118.45 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=74.3
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
+.+.+|||||+...+.....-+++|||||+++.|.|||... ..|...+.| .+|.|.....+ .--|+|.|...
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~---~~~~~~~~l-~~~~v~~~~~~----~r~~cF~i~~~ 370 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGA---VAGGLIQDL-DNCSVMAVDCE----DRRYCFQITTP 370 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTC---SSCCCCBCS-SCCEEEEECCT----TCSSEEEEECT
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCC---CCCCeEEEC-CceEEEECCCC----CCCceEEEEec
Confidence 34569999999865444345578999999999999998544 244445555 45666542111 22478999864
Q ss_pred CCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 83 KEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 83 ~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
++.+.+.|.|.|.+|+..||+||+.||.+.
T Consensus 371 -~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 371 -NGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp -TSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred -CCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 455789999999999999999999997654
No 66
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.22 E-value=3.3e-11 Score=98.54 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=63.9
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEec-ceeeecccCCCC-------C---------CCccEEEEecCceEEeeC-
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLES-RLLAYYKKKPQD-------N---------QVPIKTLLIDGNCRVEDR- 64 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g-~~l~~YK~~P~~-------~---------~~Pirs~vid~~~rVed~- 64 (335)
+.+.+||||++.+.+.+ ..-+++|||||++ .+|.||+. +.+ . ..|.+.+.+ .+|.+.+.
T Consensus 2 ~~~~k~G~L~K~~g~~~-~k~WkkRwFvL~~~~~l~Y~~~-~~d~~~~~~~~~i~l~~~~~~~~~~~i~l-~~~~~~~~~ 78 (128)
T 2rlo_A 2 AIPIKQSFLLKRSGNSL-NKEWKKKYVTLSSNGFLLYHPS-INDYIHSTHGKEMDLLRTTVKVPGKRPPR-AISAFGPSA 78 (128)
T ss_dssp CCEEEEEEEEEECSCST-TCCEEEEEEEEETTTEEEEESS-HHHHHHTCSCEEEESSSCEEECSSCCCCC-SSCCCSCCS
T ss_pred CcceeEEEEEEecCCCc-cCCccEEEEEEeCCCEEEEecc-hhhhccccCCCeeeeeeeEEecCCCcccc-ccccccccc
Confidence 45679999999953322 3346699999997 57776653 111 0 123332333 22222210
Q ss_pred -CcceecCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 65 -GLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 65 -Gre~~hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
|........-|.|.|... ..+.+.|.|.|.+|+..||+||+.||..
T Consensus 79 ~~~~~~~~~~~~~F~I~t~--~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 79 SGSAGQAEEENFEFLIVSS--TGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp CCCCSSCCCCCCCEEEECT--TSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCceEEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 000000123467888643 4588999999999999999999999754
No 67
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.20 E-value=3.5e-11 Score=115.74 Aligned_cols=101 Identities=13% Similarity=0.121 Sum_probs=71.5
Q ss_pred CCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecC
Q 019797 4 KVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 83 (335)
Q Consensus 4 ~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~ 83 (335)
.+.++|||++.|.+.+...-+++|||||+++.|.|||. + + ..|.+.+-| .+|.|... +. ..--|+|.|...
T Consensus 277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~-~-~~~~~~i~l-~~~~v~~~--~~--~~r~~~F~i~t~- 347 (385)
T 2q13_A 277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-G-D-VAGGLAMDI-DNCSVMAV--DC--EDRRYCFQITSF- 347 (385)
T ss_dssp CSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-S-C-SSCEEEEEC-TTCEEEEE--CC--TTCSSEEEEECT-
T ss_pred CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-C-C-cCCCceEEc-cceEEEec--cc--cCCCceEEEEeC-
Confidence 45799999999876433334779999999999998887 2 3 368888878 44555432 11 123478999854
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
++.+.+.|.|.|.+|+..||+||+.||.+.
T Consensus 348 ~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 348 DGKKSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp TSCBCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 334889999999999999999999997653
No 68
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.17 E-value=3.4e-11 Score=112.20 Aligned_cols=97 Identities=19% Similarity=0.352 Sum_probs=74.6
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecc-------eeeecccCCCCC---CCccEEEEecCceEEeeCCcceecCc
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR-------LLAYYKKKPQDN---QVPIKTLLIDGNCRVEDRGLKTHHGH 72 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~-------~l~~YK~~P~~~---~~Pirs~vid~~~rVed~Gre~~hg~ 72 (335)
..+.++|||++. .-+++|||||+++ .|.|||.+.... ..|.+++-|..++.|+.... .+
T Consensus 8 ~~v~k~G~L~K~-------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~----~~ 76 (264)
T 1qqg_A 8 SDVRKVGYLRKP-------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD----SK 76 (264)
T ss_dssp -CEEEEEEEECT-------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC----SS
T ss_pred CCccEEEEEEEC-------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccC----CC
Confidence 456699999987 2466999999999 999998665311 37999999977777765321 23
Q ss_pred eeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 73 MVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 73 ~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.-|+|.|+.. .+.+.|.|.|.+|+..|++||+.++.+.
T Consensus 77 ~~~~F~I~t~---~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 77 NKHLVALYTR---DEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp CSSEEEEEES---SCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred CCcEEEEEEC---CEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 4578999854 7899999999999999999999996554
No 69
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.09 E-value=1.1e-10 Score=113.87 Aligned_cols=98 Identities=18% Similarity=0.138 Sum_probs=72.4
Q ss_pred CceeeeEEEeeecccccccceeeEEEE--ecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEE-e
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVL--ESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVY-N 81 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL--~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iy-n 81 (335)
..+||||++.|...-.+. +||||| +++.|.|||+. .+. .|.+.+.|.+.+.|.. -+. .+..+.|.|. .
T Consensus 146 ~~keG~L~KrG~~~k~Wk---rRwFVL~~~~~~L~Yy~~~-~~~-~p~g~I~L~~~~~~~~--~~~--~~~~~~f~I~~~ 216 (386)
T 3lju_X 146 GYREGFLWKRGRDNGQFL---SRKFVLTEREGALKYFNRN-DAK-EPKAVMKIEHLNATFQ--PAK--IGHPHGLQVTYL 216 (386)
T ss_dssp SEEEEEEEEECSSSCCEE---EEEEEEETTTTEEEEEC-------CCSEEEEGGGEEEEEC--HHH--HTSTTCEEEEEE
T ss_pred cccccceeeeccccCCce---EEEEEEEcCCCEEEEECCC-Ccc-CcccEEEeeccEEEEc--ccc--cCCCceEEEEEe
Confidence 458999999998876655 999999 99999999865 344 9999999966444442 111 1244566664 3
Q ss_pred cCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 82 KKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 82 ~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
....++.+-|.|.|.+|+..|++||+.|..
T Consensus 217 ~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 217 KDNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp ETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 346679999999999999999999998843
No 70
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=98.98 E-value=8.5e-10 Score=91.28 Aligned_cols=104 Identities=15% Similarity=0.247 Sum_probs=74.8
Q ss_pred ceeeeEEE--eeecccccccceeeEEEEecceeeecccCCCC-CCCccEEEEecCceEEeeCCc-ceecC---ceeEEEE
Q 019797 6 VYEGWMVR--YGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD-NQVPIKTLLIDGNCRVEDRGL-KTHHG---HMVYVLS 78 (335)
Q Consensus 6 ~~EGWly~--~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~-~~~Pirs~vid~~~rVed~Gr-e~~hg---~~~yvf~ 78 (335)
.+||||-+ .|..+- +.+++|||||.++.|.||+.++.. ...|.+.+-|+....|+.-.. +.+|- ...++|.
T Consensus 2 ~~eGwl~~pk~~~~~k--~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~ 79 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKK--FGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQ 79 (117)
T ss_dssp CSEEEEECCCCSSSSC--CCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEE
T ss_pred ceEEEEEeecCCCccC--CCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEE
Confidence 48999986 432222 235599999999999999976532 247898888877766665311 11221 2468999
Q ss_pred EEecC---CCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 79 VYNKK---EKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 79 iyn~~---~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
|-... ...+.+-|.|.|.||..+|+.||+.+|.
T Consensus 80 I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 80 ILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp EEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred EEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 95432 3458999999999999999999999864
No 71
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=98.84 E-value=7e-09 Score=98.37 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=74.3
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC--CCccEEEEecCceEEee--CCcceecCceeEEEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN--QVPIKTLLIDGNCRVED--RGLKTHHGHMVYVLS 78 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~--~~Pirs~vid~~~rVed--~Gre~~hg~~~yvf~ 78 (335)
+.++.+||||+.+..+-+++ +|||||+++.|.||++.. ++ ..++..+.+ ++|-|.. .+++.+.--.-|.|+
T Consensus 156 ~~pe~~G~L~~k~~~~k~Wk---kRyfvLr~sgLyy~~K~~-sk~~r~l~~l~~L-~~~~VY~~~~~kkk~kaPt~~~F~ 230 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWK---KRYFLLRASGIYYVPKGK-AKVSRDLVCFLQL-DHVNVYYGQDYRNKYKAPTDYCLV 230 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEE---EEEEEECSSCEEEC----------CCEEEECG-GGCEEEEESSHHHHTCCSCSCEEE
T ss_pred CCCccEEEEEEECCCCCCCe---EEEEEEeCCEEEEEeCCC-CCccccceEEEEc-CCcEEEEecccccccCCCCCcEEE
Confidence 46779999999988777776 999999999998777543 33 244556667 4555543 234444445689999
Q ss_pred EEecC---CCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 79 VYNKK---EKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 79 iyn~~---~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
|.... .......|.|.|.++...||.||..|.
T Consensus 231 ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 231 LKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp EECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 99654 345678999999999999999999993
No 72
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=98.84 E-value=4.2e-09 Score=99.79 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=75.1
Q ss_pred CCCCceeeeEEEe-----ee----cccccccceeeEEEEecceeeecccCCCCC----CCccEEEEecCceEEeeCCcce
Q 019797 2 SSKVVYEGWMVRY-----GR----RKIGRSFIHMRYFVLESRLLAYYKKKPQDN----QVPIKTLLIDGNCRVEDRGLKT 68 (335)
Q Consensus 2 ~~~~~~EGWly~~-----g~----~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~----~~Pirs~vid~~~rVed~Gre~ 68 (335)
.+++.++|||.++ |. ...+...+++|||||+|+.|.|||.+.... ..|...+.| .+|.|+..-.
T Consensus 8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L-~ga~v~~a~d-- 84 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWV-ENSIVQAVPE-- 84 (279)
T ss_dssp --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBC-CSCEECCCTT--
T ss_pred CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEec-cCcEEEeccc--
Confidence 4567799999875 21 123567888999999999999999765331 367778888 6677773211
Q ss_pred ecCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 69 HHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 69 ~hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
+.+--+||+|-.. ..+.+.|.|.|.+|+..|+.||..|+..
T Consensus 85 -~~kKk~vF~L~t~--~g~~yLFQA~s~eEm~~WI~aI~~a~~~ 125 (279)
T 3a8n_A 85 -HPKKDFVFCLSNS--LGDAFLFQTTSQTELENWITAIHSACAA 125 (279)
T ss_dssp -SSSSCSCCCEEET--TTEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCcEEEEEcC--CCCEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 1122358888654 6778999999999999999999999653
No 73
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=98.78 E-value=5.2e-08 Score=86.81 Aligned_cols=103 Identities=14% Similarity=0.224 Sum_probs=83.0
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
..|+-.+||=..+..++.+-=+++||||+++..|.|||.+-....+|+.++.+ .+|.|+.. .++.+ -=|.+++...
T Consensus 45 ~iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~geP~~~I~L-rGCEVtpD--Vnva~-~Kf~IkL~vP 120 (173)
T 4f7h_A 45 SIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNL-RGCEVTPD--VNISG-QKFNIKLLIP 120 (173)
T ss_dssp GTTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCSSCCSEEEEC-TTCEEEEE--EETTT-TEEEEEEEEE
T ss_pred cChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhcCCCceEEec-CceEEecc--ccccc-cceeEEEecc
Confidence 34667899988899999999999999999999999999877656799999999 88888861 11111 1144555544
Q ss_pred -CCCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 83 -KEKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 83 -~~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
.++.+.+-|.|.|.++-++||-|++.|
T Consensus 121 ~~~gm~e~~Lrcd~E~qya~WMAAcrLA 148 (173)
T 4f7h_A 121 VAEGMNEIWLRCDNEKQYAHWMAACRLA 148 (173)
T ss_dssp ETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCcceeeeecCCHHHHHHHHHHhhhh
Confidence 357888999999999999999999999
No 74
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=6.7e-08 Score=82.48 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=82.6
Q ss_pred CCCCCceeeeEEEeeecccccccceeeEEEEecc------eeeecccCCCCC--CCccEEEEecCceEEeeCCcceecCc
Q 019797 1 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESR------LLAYYKKKPQDN--QVPIKTLLIDGNCRVEDRGLKTHHGH 72 (335)
Q Consensus 1 ~~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~------~l~~YK~~P~~~--~~Pirs~vid~~~rVed~Gre~~hg~ 72 (335)
|...+.|+||||+-..-++|-- +++|||||-.. .|.+|..+-..+ +.|-|++-+.+|++|.+-+-|+---+
T Consensus 8 m~e~~vk~G~L~~q~q~~fgkK-Wrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk 86 (127)
T 2d9w_A 8 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPR 86 (127)
T ss_dssp SCCCSSEEEEEEECBCSSSSCB-CCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCS
T ss_pred ccCccccceEEEecccchhhhh-hheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCC
Confidence 4456779999999887789865 99999999875 467676543322 68899999999999999766621223
Q ss_pred eeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 73 MVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 73 ~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
.-++|+|+-+ ++.+.|||.+ +|...||.+|.+.
T Consensus 87 ~~~aF~l~T~---er~~~laAe~-~E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 87 DTSAFFLETK---ERLYLLAAPA-AERGDWVQAICLL 119 (127)
T ss_dssp SCEEEEEEES---SCEEEEEECH-HHHHHHHHHHHHH
T ss_pred cceEEEEEeC---CcEEEEEeCc-HHHHHHHHHHHHH
Confidence 5599999975 4999999996 5899999999877
No 75
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.74 E-value=1.5e-08 Score=97.32 Aligned_cols=103 Identities=20% Similarity=0.294 Sum_probs=64.8
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEEe-cceeeecccCCCCC---CCccEEEEecCceEEeeCCcceecCceeEEE
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVLE-SRLLAYYKKKPQDN---QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVL 77 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~-g~~l~~YK~~P~~~---~~Pirs~vid~~~rVed~Gre~~hg~~~yvf 77 (335)
+.++.+||||.|.|..- ..+++|||||+ ++.|.|||++|... .+||...-+.++..+...+ ...+.|
T Consensus 3 ~~~v~keG~L~K~g~~~---k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~------~~~~~f 73 (446)
T 4ejn_A 3 DVAIVKEGWLHKRGEYI---KTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER------PRPNTF 73 (446)
T ss_dssp -CCEEEEEEEEEEETTT---TEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECS------SSTTEE
T ss_pred CceEEEEeeEEeecccc---ccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCC------CCCcee
Confidence 45677999999998543 35779999997 78888999998554 3455443332222222221 113456
Q ss_pred EEEecCCC-cceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 78 SVYNKKEK-YHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 78 ~iyn~~~~-~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.|...... ...-++.+.++||.+.|+.||+.||+..
T Consensus 74 ~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 74 IIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp EEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred EEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 66532211 1122788999999999999999997654
No 76
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=98.64 E-value=2e-07 Score=87.18 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=72.8
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCc--cEE-EEecCceEEee-CCcceecCceeEEEE
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVP--IKT-LLIDGNCRVED-RGLKTHHGHMVYVLS 78 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~P--irs-~vid~~~rVed-~Gre~~hg~~~yvf~ 78 (335)
+.++.+||||+.+..+-+++ +|||||+++.|.||+ +..++ .| +.. +-+++...... .+++.+.--.-|.|+
T Consensus 130 ~~P~~~G~L~~ke~~~K~Wk---kRyfvLr~sgLy~~~-k~~sk-~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ 204 (256)
T 3hk0_A 130 SSPEIQGFLHVKELGKKSWK---KLYVCLRRSGLYCST-KGTSA-APRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLC 204 (256)
T ss_dssp SCEEEEEEEEEECTTSSCEE---EEEEEEETTEEEEES-STTCC-CGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEE
T ss_pred CCCcceeEEEEecCCCCcce---EEEEEEeCCEEEEEe-cCCCC-ccccceEEEEcCCCEEEEecccccccCCCCCCEEE
Confidence 45679999999987776666 999999999997666 44444 33 222 24533333232 345544445579999
Q ss_pred EEecCC---CcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 79 VYNKKE---KYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 79 iyn~~~---~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
|..... .....-|.|.|.+++..|+.||..|.
T Consensus 205 ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 205 IKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp EEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 985432 24568899999999999999999993
No 77
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=98.53 E-value=6.8e-07 Score=79.07 Aligned_cols=103 Identities=13% Similarity=0.238 Sum_probs=76.1
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEec
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNK 82 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~ 82 (335)
..++-.|||=..+..++.+-=+++||||+++-.|.|||.+-....+|+.++-+ .+|.|... ...-+.=|.+++...
T Consensus 24 ~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~geP~~~inL-rGCEVtPD---Vnva~~Kf~ikL~ip 99 (165)
T 4bbk_A 24 DIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNL-RGCEIVPD---VNVSGRKFGIKLLIP 99 (165)
T ss_dssp --CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTTSCCSEEEEC-TTCEEEEE---EETTTTEEEEEEEEE
T ss_pred cChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhcCCCceEEec-CccEEecc---cccccceeeEEEecC
Confidence 45678899988899999999999999999999999999877666899999999 66888851 000112266777655
Q ss_pred C-CCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 83 K-EKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 83 ~-~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
. ++...+-|.|.|.++-++||-|++.|
T Consensus 100 ~~~gm~e~~LrcdsE~QYa~WMAAcrLA 127 (165)
T 4bbk_A 100 VADGMNEVYLRCDHEDQYARWMAACILA 127 (165)
T ss_dssp ETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCcceeeeeecCCHHHHHHHHHHhhhc
Confidence 4 46678889999999999999999999
No 78
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.07 E-value=2.4e-05 Score=66.92 Aligned_cols=101 Identities=20% Similarity=0.332 Sum_probs=69.6
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeC-Ccce-ecCceeEEEEE
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDR-GLKT-HHGHMVYVLSV 79 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~-Gre~-~hg~~~yvf~i 79 (335)
.+.+-+||||+|.....-- .+++|++|++|.+.||+.+-. ..|.|-+.+.+=..|+.- +-.. ..+...+.|.|
T Consensus 5 ~s~vlkeGWmVH~t~~d~~---rKRHYWrLD~K~Itlf~~e~~--~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi 79 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRDNL---RKRHYWRLDSKCLTLFQNESG--SKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEI 79 (129)
T ss_dssp CTTSEEEEEEEEEESSCCC---CEEEEEEEESSCEEEESCSSC--CSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEE
T ss_pred CCceeecceEEEEccCCcc---ccceeeEecCCeEEEEecCCC--CceeceeeHHHhcccccccCccccCCCCCCceEEE
Confidence 3566799999999976654 559999999999999998643 356666666666667663 1211 12334466777
Q ss_pred EecCCCcceEEEeec---------------CHHHHHHHHHHHHHHH
Q 019797 80 YNKKEKYHRITMAAF---------------NIQEALIWKEKIELVI 110 (335)
Q Consensus 80 yn~~~~~~~~~laa~---------------s~eea~~W~~a~~~Ai 110 (335)
-. .+..+=+|+. ..+.|..|..|+++|+
T Consensus 80 ~T---~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqAL 122 (129)
T 2d9z_A 80 IT---DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQAL 122 (129)
T ss_dssp EC---SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHH
T ss_pred EE---CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhc
Confidence 53 2444445552 2799999999999994
No 79
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.02 E-value=3.6e-05 Score=65.50 Aligned_cols=101 Identities=17% Similarity=0.293 Sum_probs=72.1
Q ss_pred CCCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCccee--cCceeEEEEE
Q 019797 2 SSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTH--HGHMVYVLSV 79 (335)
Q Consensus 2 ~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~--hg~~~yvf~i 79 (335)
.+.+-+||||+|.....--+ +++|++|++|.+.||+.+- + ..|.|.+.+.+=+.|+.---.+. -+...+.|.|
T Consensus 5 ~s~vlkeGW~VH~t~~d~~r---KRHYWrLD~K~Itlf~~e~-~-~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi 79 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLR---KRHYWRLDCKCITLFQNNT-T-NRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEI 79 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCC---EEEEEEECSSEEEEESSSS-C-SSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEE
T ss_pred CCceeecceEEEEccCCccc---cceeeEecCCeEEEEecCC-C-CceeeeeehhHeecccccccccccCCCCCCceEEE
Confidence 35667999999999777655 5999999999999999863 2 37888888888888887422221 2234578888
Q ss_pred EecCCCcceEEEeec-----------CHHHHHHHHHHHHHHH
Q 019797 80 YNKKEKYHRITMAAF-----------NIQEALIWKEKIELVI 110 (335)
Q Consensus 80 yn~~~~~~~~~laa~-----------s~eea~~W~~a~~~Ai 110 (335)
-.. +..+=+|+. ..+.|..|..|+++|+
T Consensus 80 ~T~---~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 80 VTA---NATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp ECS---SCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred EeC---CeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 642 222333331 2388999999999994
No 80
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=97.64 E-value=0.00019 Score=62.74 Aligned_cols=89 Identities=20% Similarity=0.204 Sum_probs=68.0
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCC
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKE 84 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~ 84 (335)
+-+.|.|.++.- .|+++|+|||.....-||- +|... +--+.+.++.+|+|+-.+-+ .|.|.-.
T Consensus 52 Ilk~G~v~KrkG-----l~~kkR~liLT~~PrL~Yv-dp~~~-~~KGeIpls~~l~ve~k~~~--------~F~I~Tp-- 114 (151)
T 1w1g_A 52 ILKMGPVDKRKG-----LFARRRQLLLTEGPHLYYV-DPVNK-VLKGEIPWSQELRPEAKNFK--------TFFVHTP-- 114 (151)
T ss_dssp EEEEEEEEEEET-----TEEEEEEEEEETTTEEEEE-ETTTT-EEEEEECCCTTCEEEESSSS--------EEEEEET--
T ss_pred EEEEEEEEeccc-----CcceeEEEEEcCCceEEEE-cCccc-cccceEecCCCeeEEEcCCC--------EEEEECC--
Confidence 448999999431 5588999999988887675 56444 66677788899999975433 5666544
Q ss_pred CcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 85 KYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 85 ~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
++++.|.+. ..+|..|++||+.|+..
T Consensus 115 -~RtY~~~d~-~~~AqeWv~aI~~~~~~ 140 (151)
T 1w1g_A 115 -NRTYYLMDP-SGNAHKWCRKIQEVWRQ 140 (151)
T ss_dssp -TEEEEEECT-TSCHHHHHHHHHHHHHH
T ss_pred -CceEEEEcC-ccCHHHHHHHHHHHHHH
Confidence 399999997 88999999999999654
No 81
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.53 E-value=0.00045 Score=59.70 Aligned_cols=90 Identities=18% Similarity=0.047 Sum_probs=64.5
Q ss_pred cccccceeeEEEEecceeeecc----cCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCCC---cceEEE
Q 019797 19 IGRSFIHMRYFVLESRLLAYYK----KKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEK---YHRITM 91 (335)
Q Consensus 19 ~g~q~~~~RyFVL~g~~l~~YK----~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~~---~~~~~l 91 (335)
-|.| -|||+|=+.+|=|=| ++....=.-..++-+ .+..|+.-.-+ ...|.|+|++..++ ...+.|
T Consensus 31 kg~q---qR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L-~gm~V~~~e~e----~~p~~~~l~s~~~G~~~k~~i~~ 102 (140)
T 3qwm_A 31 LGLH---QREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSL-YGMQVLLFENQ----YYPNGIRLTSSVPGADIKVLINF 102 (140)
T ss_dssp TTTT---EEEEEEESSCEEEEECCC---CCCCCCCEEEECC-TTEEEEEECCS----SCTTEEEEEECCTTSCCEEEEEE
T ss_pred cccc---ceEEEEecchhhheeecccCCCCCceEEEEEeee-cceEEEcccCC----CCceEEEEEecCCCCcceEEEEE
Confidence 3555 999999988887554 222222233344455 66777663333 37899999987644 466999
Q ss_pred eecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 92 AAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 92 aa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
+|.|.+|.++|+++|++||.+.++-
T Consensus 103 ~A~s~~ER~rwi~dL~esI~e~~em 127 (140)
T 3qwm_A 103 NAPNPQDRKKFTDDLRESIAEVQEM 127 (140)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887664
No 82
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.19 E-value=0.00097 Score=56.74 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=57.4
Q ss_pred ceeeEEEEecceeeecccCCCCC------CCccEEEEecCceEEeeCCcceecCceeEEEEEEecCCCcceEEEeecCHH
Q 019797 24 IHMRYFVLESRLLAYYKKKPQDN------QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQ 97 (335)
Q Consensus 24 ~~~RyFVL~g~~l~~YK~~P~~~------~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~~~~~~~laa~s~e 97 (335)
.+.|||+|=.+.|=|-+..|... ..|++.+ .|++.--. -...+.|.|+-+. .+.+.++|.|.|
T Consensus 44 ~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~------~V~~~ed~---~~~~~aFeI~g~~--~~~i~v~~~s~e 112 (132)
T 1v61_A 44 KEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGM------VVNRLDEI---EGSDCMFEITGST--VERIVVHCNNNQ 112 (132)
T ss_dssp CCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTC------BCSTTCSS---SSSCCCEEEECSS--SCEEEECCCCSH
T ss_pred ceEEEEEEcCCeEEEEEecCCCceEEEEEEEeccee------EEEecccc---ccCccEEEEecCC--CceEEEEeCCHH
Confidence 35999999999998888877432 4566544 44442111 1367889999543 478999999999
Q ss_pred HHHHHHHHHHHHHh
Q 019797 98 EALIWKEKIELVID 111 (335)
Q Consensus 98 ea~~W~~a~~~Ai~ 111 (335)
|..+||++|+.||+
T Consensus 113 E~~~Wl~~L~~~i~ 126 (132)
T 1v61_A 113 DFQEWMEQLNRLTK 126 (132)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999964
No 83
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.61 E-value=0.0043 Score=51.50 Aligned_cols=97 Identities=9% Similarity=0.135 Sum_probs=63.4
Q ss_pred eeEEEeeecccccccceeeEEEEecceeeeccc-CCCCC--------CCccEEEEecCceEEeeCCcceecCceeEEEEE
Q 019797 9 GWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKK-KPQDN--------QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSV 79 (335)
Q Consensus 9 GWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~-~P~~~--------~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~i 79 (335)
..|.++++++.. +.|||+|..+...+|.. +|... ..=|+.+..|..|.+-.+-++.. ..-..|+|
T Consensus 17 t~l~K~~~~~~~----k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~--~~~~~FsI 90 (131)
T 1mai_A 17 SQLLKVKSSSWR----RERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDI--PEDRCFSI 90 (131)
T ss_dssp EEEEEESSSSCE----EEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTS--CGGGEEEE
T ss_pred CeEEEECCCCcc----eeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcC--CccceEEE
Confidence 467777765532 57999999877666653 33211 23356666665554422211111 13458998
Q ss_pred EecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 80 YNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 80 yn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
.-.. +.+.+-|-|.|.+||..|+.+|+..|..
T Consensus 91 iy~~-~~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 91 VFKD-QRNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp EESS-SCCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EECC-CCceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 8774 3689999999999999999999988654
No 84
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=96.43 E-value=0.0062 Score=58.59 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=59.7
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCCC
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEK 85 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~~ 85 (335)
.+||.++++...+ .+.|||+|=.++|=+-|.+....-..-..+-+ .++.|++. ..+...+.|.|.++
T Consensus 245 i~~g~l~~~~~~~-----~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L-~~l~v~~~----~~~~~~~~f~i~~~--- 311 (434)
T 3mpx_A 245 LKEGTLMKVTGKN-----RRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAV-ANMKVSRP----VMEKVPYALKIETS--- 311 (434)
T ss_dssp EECCEEEEEETTE-----EEEEEEEEESSEEEEEEECTTSCEEEEEEEEC------CCC----CCTTSCSEEEEECS---
T ss_pred EecceEEEEeCCC-----ceEEEEEEECCEEEEEEecCCCeEEEEEEEEc-CCcEEEec----CCCCCCeeEEEecC---
Confidence 3899998876433 24799999888888777554333112222333 55566532 22345688888653
Q ss_pred cceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 86 YHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 86 ~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
.+.++|.|.|.+|...|+++|+.||++.
T Consensus 312 ~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 312 ESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 4579999999999999999999998764
No 85
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=96.10 E-value=0.0063 Score=54.63 Aligned_cols=46 Identities=13% Similarity=0.266 Sum_probs=36.1
Q ss_pred CCCceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEe
Q 019797 3 SKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLI 55 (335)
Q Consensus 3 ~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vi 55 (335)
..+-.+|||++.|.---+ +++|||||+++.|.||+.++ .+++.|.+
T Consensus 19 ~~~~~~g~l~~~~~~~~~---w~~rw~vl~~~~~~~~~~~~----~~~k~G~L 64 (228)
T 3tfm_A 19 GSPYFHSFLYMNGGLMNS---WKRRWCVLKDETFLWFRSKQ----EALKQGWL 64 (228)
T ss_dssp --CCEEEEEEECCTTTCC---CEEEEEEEETTEEEEESSCC----CSSEEEEE
T ss_pred CCCceEEEEeecCccccc---ceEEEEEEeCCEEEEeccCC----CcceEEEE
Confidence 345589999999755444 56999999999999998554 78888887
No 86
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=95.90 E-value=0.094 Score=51.09 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=67.4
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCC-CCCCcc-EEEEecCceEEeeC--Ccc-eecCceeEEEEEEe
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQ-DNQVPI-KTLLIDGNCRVEDR--GLK-THHGHMVYVLSVYN 81 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~-~~~~Pi-rs~vid~~~rVed~--Gre-~~hg~~~yvf~iyn 81 (335)
++|.|..+...+ |. ...|||+|=.++|=+=|.+.. ...--. ..+-+ .++.|++. |.. ..+....+.|.|++
T Consensus 336 ~~G~l~~~~~~~-~~--~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l-~~~~v~~~~d~~~~~~~~~~~~~F~i~~ 411 (466)
T 2pz1_A 336 YSGELTRVTQPQ-AK--SQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDM-DGLEVVDLEDGKDRDLHVSIKNAFRLHR 411 (466)
T ss_dssp EEEEEEEECTTT-CC--EEEEEEEEETTEEEEEEECSSCTTCEEEEEEEET-TTCEEEECCSBSCCSSCCCBCEEEEEEC
T ss_pred EeeeEEEEecCC-CC--eeEEEEEEECCEEEEEEeccccCCceEEeeeeec-cceEEEeCCCCcccccccccceeEEEEe
Confidence 778877765321 11 247888888777765554421 111112 22334 66777763 321 12223568999998
Q ss_pred cCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 82 KKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 82 ~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
+. ....+.|.|.|.+|-..|+++|+.|+.+.++.
T Consensus 412 ~~-~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~~ 445 (466)
T 2pz1_A 412 GA-TGDSHLLCTRKPEQKQRWLKAFAREREQVQLD 445 (466)
T ss_dssp SS-SCCEEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CC-CCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 64 45689999999999999999999998876553
No 87
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=95.52 E-value=0.13 Score=49.47 Aligned_cols=105 Identities=21% Similarity=0.199 Sum_probs=67.0
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCC-CCCccE-EEEecCceEEeeC--Ccc-eecCceeEEEEEEe
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD-NQVPIK-TLLIDGNCRVEDR--GLK-THHGHMVYVLSVYN 81 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~-~~~Pir-s~vid~~~rVed~--Gre-~~hg~~~yvf~iyn 81 (335)
++|.|..+... -|. ...|||+|=.++|=+=|.+... ..--.+ .+-+ .++.|++. |.. ..+....+.|.|.+
T Consensus 259 ~~G~l~~~~~~-~~k--~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l-~~~~v~~~~d~~~~~~~~~~~~~F~i~~ 334 (402)
T 2dfk_A 259 YTGEMAWIYQP-YGR--NQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDM-DKYEVIDIEDGRDDDFNVSMKNAFKLHN 334 (402)
T ss_dssp EEEEEEEESST-TCC--CEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEG-GGEEEEECCSEECSSSCCEESSEEEEEE
T ss_pred EeceEEEEecc-CCc--eEEEEEEeeCCEEEEEEeccccCCceEEeeeeec-cceEEEecCCCCccccccccceeEEEEE
Confidence 77877776431 121 2478888888777655544311 111122 2333 56777763 321 11223457899988
Q ss_pred cCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 82 KKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 82 ~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
.. ....+.|.|.|.+|-..|+++|+.|+.+.++.
T Consensus 335 ~~-~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~ 368 (402)
T 2dfk_A 335 KE-TEEVHLFFAKKLEEKIRWLRAFREERKMVQED 368 (402)
T ss_dssp SS-SSCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 64 45689999999999999999999998887664
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=95.52 E-value=0.066 Score=54.14 Aligned_cols=102 Identities=13% Similarity=0.121 Sum_probs=65.5
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcc-eecCceeEEEEEEecCCC
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLK-THHGHMVYVLSVYNKKEK 85 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre-~~hg~~~yvf~iyn~~~~ 85 (335)
++|.+......+-.. ..|||+|=.++|=+=|++ .+.-..-..+-+ .++.|++.-.. .-.....+.|.|... .+
T Consensus 408 ~~G~l~~~~~~~~~~---~~r~~fLF~d~Ll~~k~~-~~~y~~k~~i~L-~~~~v~~~~~~~~~~~~~~~~f~i~~~-~~ 481 (587)
T 3ky9_A 408 IDGELKITSVERRSK---MDRYAFLLDKALLICKRR-GDSYDLKDFVNL-HSFQVRDDSSGDRDNKKWSHMFLLIED-QG 481 (587)
T ss_dssp EEEEEEEECSSCCSC---EEEEEEEETTEEEEEEEE-TTEEEEEEEEEG-GGEEEEEC-----CCCTTCEEEEEEET-TC
T ss_pred EEeeEEEEeccCCCc---ceEEEEEECCEEEEEEec-CCEEEeeeeech-hhceeeecCCCCcccccccceeEEEEc-CC
Confidence 688887765433323 378988888888766665 222122223333 67777774111 111235688999885 34
Q ss_pred cceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 86 YHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 86 ~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
.+.++|.|.|.+|...|+++|+.||++..
T Consensus 482 ~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 482 AQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp ---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 57899999999999999999999987653
No 89
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=95.52 E-value=0.057 Score=57.51 Aligned_cols=96 Identities=18% Similarity=0.385 Sum_probs=64.8
Q ss_pred CceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC---CCccEEEEecCceEEeeCCcceecCceeEEEEEEe
Q 019797 5 VVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN---QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 81 (335)
Q Consensus 5 ~~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~---~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn 81 (335)
+.-.|||-....+-+ .-=++.=||||...-|..||.+-... +.|+ +++++.|. +..-+..-++|.|+|
T Consensus 540 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~ 610 (772)
T 3zvr_A 540 VIRKGWLTINNIGIM-KGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSV------DNLKLRDV--EKGFMSSKHIFALFN 610 (772)
T ss_dssp EEEEEEEEESSSCCC----CCEEEEEEESSEEEEESSTTCCCEEEEEEC------TTEEEEEC---------CEEEEEEE
T ss_pred ceeeeeeeecccccc-cCCCccceeeccccccccccchhhhcccccccc------cccccchh--hhccccccccccccC
Confidence 345699887442221 11245679999999999999744222 4444 57776663 211123447899998
Q ss_pred cCCC-----cceEEEeecCHHHHHHHHHHHHHH
Q 019797 82 KKEK-----YHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 82 ~~~~-----~~~~~laa~s~eea~~W~~a~~~A 109 (335)
+... .+|++|+|.|.|+...|+.+|-.|
T Consensus 611 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 611 TEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp TTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred CccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 8765 589999999999999999999988
No 90
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=95.37 E-value=0.064 Score=54.01 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=61.1
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC--CCcc--------------EEEEecCceEEeeCCccee
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN--QVPI--------------KTLLIDGNCRVEDRGLKTH 69 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~--~~Pi--------------rs~vid~~~rVed~Gre~~ 69 (335)
.+||.|..+..+. .. ..|||+|=.++|=+-|++.... ...- ..+-+ .++.|++.+.+.
T Consensus 413 I~eG~l~~~~~~~-k~---~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L-~~l~v~e~~~d~- 486 (536)
T 3odw_A 413 VHEGPLTWRVTKD-KA---VEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRL-TSAMTREVATDH- 486 (536)
T ss_dssp EEEEEEEEESCC-------CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEG-GGEEEEECTTCT-
T ss_pred eeecceEEEecCC-Ce---eEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeec-ccceeecccccC-
Confidence 3788887765332 22 3788888888777666543210 0100 01222 566777754443
Q ss_pred cCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 70 HGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 70 hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
+.+|+.. ........++|.|.|.+|-..||++|+.||++..
T Consensus 487 --~~ffli~--~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 487 --KAFYVLF--TWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp --TEEEEEE--C---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred --CceEEEe--cCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 4555543 2234667899999999999999999999987653
No 91
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=95.32 E-value=0.1 Score=48.95 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=60.2
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC--CCccE--------------EEEecCceEEeeCCccee
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN--QVPIK--------------TLLIDGNCRVEDRGLKTH 69 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~--~~Pir--------------s~vid~~~rVed~Gre~~ 69 (335)
.+||.|..+..+. . .+.|||+|=.++|=+-|++.... ..+.+ .+-+ .++.|++..-+.
T Consensus 260 i~eG~l~~~~~~~-~---~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l-~~~~v~e~~~~~- 333 (377)
T 3p6a_A 260 VHEGPLTWRVTKD-K---AVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRL-TSAMTREVATDH- 333 (377)
T ss_dssp EEEEEEEEESSSS-C---EEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEG-GGEEEEECTTCT-
T ss_pred EEECCcEEEecCC-C---eEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEec-hhhhcccccccc-
Confidence 3788887665332 2 24788888777776666553211 11111 1222 556676643332
Q ss_pred cCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 70 HGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 70 hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
+.+| -|.....+...++|.|.|.+|-..||++|++||+.
T Consensus 334 --~~~~--~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 334 --KAFY--VLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp --TEEE--EEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --ceeE--EEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence 2333 33444457788999999999999999999999754
No 92
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=95.23 E-value=0.15 Score=48.05 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=65.5
Q ss_pred eeeeEEEeeeccccc--------ccceeeEEEEecceeeecccCCCC-----C--CCccEEEEecCceEEeeCCcceecC
Q 019797 7 YEGWMVRYGRRKIGR--------SFIHMRYFVLESRLLAYYKKKPQD-----N--QVPIKTLLIDGNCRVEDRGLKTHHG 71 (335)
Q Consensus 7 ~EGWly~~g~~~~g~--------q~~~~RyFVL~g~~l~~YK~~P~~-----~--~~Pirs~vid~~~rVed~Gre~~hg 71 (335)
++|.+......+-|. .=...||++|=..+|=+=|.++.. + .--.|..+-=.++.|++...
T Consensus 212 ~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~----- 286 (353)
T 1kz7_A 212 MQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK----- 286 (353)
T ss_dssp EEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT-----
T ss_pred eecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC-----
Confidence 788877643333331 113478887777766655555311 1 01122222235677776411
Q ss_pred ceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 72 HMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 72 ~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
+.-+.|.|.... ....+.|.|.|.+|-..|+++|+.||.++++.
T Consensus 287 ~~~~~F~i~~~~-~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 330 (353)
T 1kz7_A 287 GDTKKFEIWYNA-REEVYIIQAPTPEIKAAWVNAIRKVLTSQLQA 330 (353)
T ss_dssp TBTTEEEEEETT-TTEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEECC-CCcEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 134568888753 46789999999999999999999999988775
No 93
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=95.14 E-value=0.19 Score=48.07 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=62.8
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcc-eecCceeEEEEEEecCCC
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLK-THHGHMVYVLSVYNKKEK 85 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre-~~hg~~~yvf~iyn~~~~ 85 (335)
++|.+......+-. ...||++|=.++|=+-|.+. +. --++..+-=..+.|++..-. .-+....+.|.|... ..
T Consensus 236 ~~G~l~~~~~~~~~---~~~~~~fLF~d~Ll~~k~k~-~~-y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~-~~ 309 (406)
T 2vrw_B 236 IDGELKITSVERRS---KTDRYAFLLDKALLICKRRG-DS-YDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIED-QG 309 (406)
T ss_dssp EEEEEEEECSSCCS---CEEEEEEEESSEEEEEEEET-TE-EEEEEEEETTTEEEEC--------CTTCEEEEEEET-TC
T ss_pred ccccEEEEecCCCc---cceEEEEecCCEEEEEEecC-Cc-eEEEEEecccceeeeecCCCCccCCccceeeEEEec-CC
Confidence 78888766432222 24788888877776555542 22 11222222256667663111 111234588888865 34
Q ss_pred cceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 86 YHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 86 ~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
.+.++|.|.|.+|...|+++|+.||.+..
T Consensus 310 ~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 310 AQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred CceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 56799999999999999999999987654
No 94
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=94.28 E-value=0.18 Score=47.19 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=59.9
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCC---------CCCCccEEEEecCceEEeeCCcceecCceeEEE
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQ---------DNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVL 77 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~---------~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf 77 (335)
++|-+...|. ...|||+|=..+|=+=|.+.. ..-.--..+-+ .++.|++..-. ...-+.|
T Consensus 249 ~eG~l~~~g~-------~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l-~~~~v~~~~d~---~~~~~~F 317 (354)
T 1dbh_A 249 MEGTLTRVGA-------KHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFM-RKVQINDKDDT---NEYKHAF 317 (354)
T ss_dssp EEEEEEETTC-------SSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEES-CSCEEEECCCS---SSCCSEE
T ss_pred EEeeEEEEec-------CceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEec-cceEEEeCCcc---cccCccE
Confidence 7787777741 247888888777765555421 11111234444 57777774111 1245778
Q ss_pred EEEecCCCcceEEEeecCHHHHHHHHHHHHHH
Q 019797 78 SVYNKKEKYHRITMAAFNIQEALIWKEKIELV 109 (335)
Q Consensus 78 ~iyn~~~~~~~~~laa~s~eea~~W~~a~~~A 109 (335)
.|.++. ...+.|.|.|.+|...|+++|+.|
T Consensus 318 ~i~~~~--~~~~~l~a~s~~ek~~W~~~i~~~ 347 (354)
T 1dbh_A 318 EIILKD--ENSVIFSAKSAEEKNNWMAALISL 347 (354)
T ss_dssp EECCTT--SCCEEEECSSHHHHHHHHHHHHHH
T ss_pred EEecCC--CCEEEEEeCCHHHHHHHHHHHHHH
Confidence 888754 568999999999999999999999
No 95
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=94.09 E-value=0.38 Score=45.07 Aligned_cols=96 Identities=11% Similarity=0.088 Sum_probs=55.9
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCC---------------CCCccEEEEecCceEEeeCCcceecC
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD---------------NQVPIKTLLIDGNCRVEDRGLKTHHG 71 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~---------------~~~Pirs~vid~~~rVed~Gre~~hg 71 (335)
++|.+.....++ -...||++|=.++|=+-|.+... ..--.+..|-=.++.|++.... .
T Consensus 255 ~~G~l~~~~~~~----~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~---~ 327 (368)
T 1xcg_A 255 HEGPLTWRISKD----KTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATD---K 327 (368)
T ss_dssp EEEEEEECCSSS----CCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSC---S
T ss_pred eecceEeeecCC----CeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccCC---C
Confidence 778877554322 13478888777776655544210 0000111221245667764211 1
Q ss_pred ceeEEEEEEecC--CCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 72 HMVYVLSVYNKK--EKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 72 ~~~yvf~iyn~~--~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
+.+ .|.... .+...++|.|.|.+|-..|+++|+.||++
T Consensus 328 ~~f---~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 328 RAF---FIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp SEE---EEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceE---EEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 233 344332 23578999999999999999999999764
No 96
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=93.96 E-value=0.47 Score=44.89 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=60.5
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCCC---------------CCccE-EEEecCceEEeeCCcceec
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDN---------------QVPIK-TLLIDGNCRVEDRGLKTHH 70 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~---------------~~Pir-s~vid~~~rVed~Gre~~h 70 (335)
++|-+.....+. =...||++|=.++|=+-|++.... .--++ .+-+ .++.|++...+.
T Consensus 259 ~eG~l~~~~~~~----~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~v~~~~~d~-- 331 (385)
T 1txd_A 259 HEGPLVWKVNRD----KTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKL-STVLVRQVATDN-- 331 (385)
T ss_dssp EEEEEEEESSSS----CBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEG-GGEEEEECCC-C--
T ss_pred EECcEEEEcCCC----CeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceec-ccccccccccCC--
Confidence 777776543221 124788888777776555432100 00011 1222 566777642221
Q ss_pred CceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 71 GHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 71 g~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
+.+|+++. ...+...++|.|.|.+|-..|+++|++||++....
T Consensus 332 -~~~f~i~~--~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~ 374 (385)
T 1txd_A 332 -KALFVISM--SDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQ 374 (385)
T ss_dssp -CEEEEEEE--CSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ceEEEEEE--cCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCC
Confidence 34555443 33457889999999999999999999999887554
No 97
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=93.55 E-value=0.45 Score=41.76 Aligned_cols=96 Identities=15% Similarity=0.164 Sum_probs=59.7
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCC-------CccEEEEecCceEEeeCCcceecCceeEEEE
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQ-------VPIKTLLIDGNCRVEDRGLKTHHGHMVYVLS 78 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~-------~Pirs~vid~~~rVed~Gre~~hg~~~yvf~ 78 (335)
-+||=|+.+..+. .. ..||++|=..+|=+=+++..... .|+ +-+ ..+.|.+.-.+. +.+|+++
T Consensus 72 l~eG~L~~k~~~~-~~---~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pv--i~L-~~~~vre~a~d~---~~~fli~ 141 (185)
T 2lg1_A 72 VRDGSVFLKNAAG-RL---KEVQAVLLTDILVFLQEKDQKYIFASLDQKSTV--ISL-KKLIVREVAHEE---KGLFLIS 141 (185)
T ss_dssp EEEEEEEEECTTC-CE---EEEEEEEESSEEECCEEETTEEECCCCSSSCSE--EES-SSCEEECCSSCS---SEEEEEC
T ss_pred eeeceEEEeccCC-Ce---eeEEEEeecCEEEEEEecCCEEEEEcccCCCCe--Eee-cceEEeccCCCC---CeEEEEE
Confidence 4788887554433 33 38998888877754433311101 121 113 355566543332 4555543
Q ss_pred EEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 79 VYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 79 iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
. ...+..-++|-|.|++|-..||++|+.||...
T Consensus 142 ~--~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~ 174 (185)
T 2lg1_A 142 M--GMTDPEMVEVHASSKEERNSWIQIIQDTINTL 174 (185)
T ss_dssp C--SSSCCCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred e--cCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhC
Confidence 3 33457889999999999999999999998765
No 98
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=92.45 E-value=0.19 Score=46.83 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=57.0
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCc---cE-EEEecCceEEeeCCcc--eec----------
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVP---IK-TLLIDGNCRVEDRGLK--THH---------- 70 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~P---ir-s~vid~~~rVed~Gre--~~h---------- 70 (335)
++|-|... -| ..||++|=.++|=+=|.+....... .+ .+-+ .++.|++.--. ...
T Consensus 234 ~~G~l~~~----~~----~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l-~~l~v~~~~d~~~~~~~s~~g~~~~~ 304 (346)
T 2z0q_A 234 CHGELKNN----RG----VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPV-KDLTLEDLQDGEVRLGGSLRGAFSNN 304 (346)
T ss_dssp EEEEEEET----TS----CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEG-GGCEEEECCTTTSCCCSCC--CCSHH
T ss_pred EeceeEEC----CC----cEEEEEECCCcEEEEEEeccCCceeeeeecCCcch-hhceeeecCCCccccCccccccccCC
Confidence 67776542 13 4788888777775555432111000 01 1223 45666664111 000
Q ss_pred CceeEEEEEEecC-CCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 71 GHMVYVLSVYNKK-EKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 71 g~~~yvf~iyn~~-~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
...-+.|.|.... .....++|.|.|.+|-..|+++|+.||+
T Consensus 305 ~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 305 ERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp HHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 1235788887643 2467899999999999999999999963
No 99
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=92.18 E-value=2.7 Score=34.04 Aligned_cols=97 Identities=18% Similarity=0.055 Sum_probs=56.1
Q ss_pred ceeeeEEEeeecccccccceeeEEEE-ecceeeecccCCCCCCCccE---EEEecCceEEeeCCcceecCceeEEEEEEe
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVL-ESRLLAYYKKKPQDNQVPIK---TLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 81 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL-~g~~l~~YK~~P~~~~~Pir---s~vid~~~rVed~Gre~~hg~~~yvf~iyn 81 (335)
.+||=|..+-+ -.+...+++||+| ..-+|-..+ ++... .+.+ ..-+ .++.|+|-.- ++.+-.+|.|--
T Consensus 9 v~eG~l~el~~--~~~k~~~~v~~FLfND~Ll~a~~-~~~~~-~~~~~~~~~~L-~~~~v~d~~d---~~~~~n~f~i~~ 80 (113)
T 1zc3_B 9 VYNGDLVEYEA--DHMAQLQRVHGFLMNDCLLVATW-LPQRR-GMYRYNALYPL-DRLAVVNVKD---NPPMKDMFKLLM 80 (113)
T ss_dssp EEEEEEEEEET--TTCCEEEEEEEEEESSEEEEEEE-ECCTT-SCEEEEEEEET-TTCEEEEECC---BTTBSSEEEEEE
T ss_pred EEeCcEEEEcc--ccCCCCccEEEEecCCEEEEEEE-eccCc-ccEEEEEEEEc-ccCEEEECCC---CcccceEEEEEe
Confidence 37887776643 2334455775555 444444333 33221 1111 2233 3456665211 234566666654
Q ss_pred cCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 82 KKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 82 ~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
. .+...+.|+|++|-..|+.+|+.|++..
T Consensus 81 ~---~~s~~~~aes~~eK~~Wl~~~~~a~~~~ 109 (113)
T 1zc3_B 81 F---PESRIFQAENAKIKREWLEVLEETKRAL 109 (113)
T ss_dssp T---TEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred C---CceEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 2 3457899999999999999999998764
No 100
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=92.16 E-value=1.1 Score=41.15 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=52.9
Q ss_pred eeeEEEEecceeeecccCCCC-C--CCccEEEEecCceEEeeCCcceecCceeEEEEEEecC--CCcceEEEeecCHHHH
Q 019797 25 HMRYFVLESRLLAYYKKKPQD-N--QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK--EKYHRITMAAFNIQEA 99 (335)
Q Consensus 25 ~~RyFVL~g~~l~~YK~~P~~-~--~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~--~~~~~~~laa~s~eea 99 (335)
+.||++|=...|=+=|.+... . .--.+..+-=.++.|++.- .| ....|.|.... .....+.|.|.|.+|-
T Consensus 222 ~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~----~~-~~~~F~i~~~~~~~~~~~~~l~a~s~~ek 296 (311)
T 1nty_A 222 RERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHV----EG-DPCKFALWVGRTPTSDNKIVLKASSIENK 296 (311)
T ss_dssp EEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCC----TT-CTTEEEEEESSSCCTTTCEEEECSSHHHH
T ss_pred ceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEcc----CC-CCceEEEEeCCCCCCCceEEEECCCHHHH
Confidence 578888777777655544321 1 1112222222677787631 11 23457777632 2456799999999999
Q ss_pred HHHHHHHHHHHhhh
Q 019797 100 LIWKEKIELVIDQH 113 (335)
Q Consensus 100 ~~W~~a~~~Ai~q~ 113 (335)
.+|+++|+.||+|.
T Consensus 297 ~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 297 QDWIKHIREVIQER 310 (311)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998763
No 101
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=91.97 E-value=1.2 Score=42.47 Aligned_cols=96 Identities=11% Similarity=0.091 Sum_probs=57.8
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCC------Cc---------c-EEEEecCceEEeeCCccee
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQ------VP---------I-KTLLIDGNCRVEDRGLKTH 69 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~------~P---------i-rs~vid~~~rVed~Gre~~ 69 (335)
.++|.|.....+.- ...||++|=.++|=+-|++..... .+ . ..+-+ .++.|++..-
T Consensus 296 i~eG~l~~~~~~~~----~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l-~~~~v~~~~~--- 367 (418)
T 3t06_A 296 IHEGPLTWRISKDK----TLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKL-NAVLIRSVAT--- 367 (418)
T ss_dssp EEEEEEEECCBTTB----CCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEG-GGEEEEECSS---
T ss_pred EEeceEEEEeCCCC----eEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceec-hhceeccccc---
Confidence 37888887653321 236888877777765665431100 00 0 11223 4666665421
Q ss_pred cCceeEEEEEEecCC-C-cceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 70 HGHMVYVLSVYNKKE-K-YHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 70 hg~~~yvf~iyn~~~-~-~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
.-..|.|.+... + .+.++|.|.|.+|-..|+++|+.||..
T Consensus 368 ---~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 368 ---DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp ---CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ---cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 122455555432 2 379999999999999999999999654
No 102
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=91.82 E-value=1.1 Score=41.50 Aligned_cols=102 Identities=17% Similarity=0.272 Sum_probs=70.5
Q ss_pred CCCCCceeeeEEEeeecccccccceeeEEEEec--c-----eeeecccCCCCC--CCccEEEEecCceEEeeCCcceecC
Q 019797 1 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLES--R-----LLAYYKKKPQDN--QVPIKTLLIDGNCRVEDRGLKTHHG 71 (335)
Q Consensus 1 ~~~~~~~EGWly~~g~~~~g~q~~~~RyFVL~g--~-----~l~~YK~~P~~~--~~Pirs~vid~~~rVed~Gre~~hg 71 (335)
|+..+..||-+ +.+.+|. +..||.||+- . .|..||+++.-. ..+=-++-+.+.|-||.- ...-
T Consensus 5 ~~~~~v~eg~v-k~r~~Kk----Wk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g---~~ld 76 (224)
T 3ml4_A 5 MTEAALVEGQV-KLRDGKK----WKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPA---LPYE 76 (224)
T ss_dssp --CCCSEEEEE-EEC---C----CEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEE---EEET
T ss_pred cccceeEEEee-eeecCCc----eeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCcccc---cccc
Confidence 45566788865 4455553 4599999984 1 466798776321 344556999999999962 2223
Q ss_pred ceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 72 HMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 72 ~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
+.-+++.|... +....||++|.|++..|-..|...+++.
T Consensus 77 k~s~TlAIIc~---d~~~vLAFds~e~l~~W~~~l~~slGe~ 115 (224)
T 3ml4_A 77 GLAHTLAIICL---SQAVMLGFDSHEAMCAWDTRIRYALGEV 115 (224)
T ss_dssp TEEEEEEEEES---SCEEEEECSSHHHHHHHHHHHHHHTSSE
T ss_pred CcccEEEEEec---CcEEEEEeCCHHHHHHHHHHHhhccCCC
Confidence 46788888865 4566999999999999999999886654
No 103
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=91.59 E-value=0.034 Score=54.17 Aligned_cols=97 Identities=19% Similarity=0.063 Sum_probs=0.0
Q ss_pred eeeeEEEeeecccccccceeeEEEEecceeeecccCCCC--------------C-CCcc-EEEEecCceEEeeCCcceec
Q 019797 7 YEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD--------------N-QVPI-KTLLIDGNCRVEDRGLKTHH 70 (335)
Q Consensus 7 ~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~--------------~-~~Pi-rs~vid~~~rVed~Gre~~h 70 (335)
+||.|++.+. .+.|||+|=..+|=+-|.++.. + .-.+ |..|-=.++.|++..-.
T Consensus 255 ~eG~l~~~~~-------~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~--- 324 (510)
T 3jzy_A 255 HSGKLYKTKS-------NKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDP--- 324 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeceEEEcCC-------CcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCC---
Confidence 7777776543 2378888877777655533321 0 0111 22222245555553111
Q ss_pred CceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 71 GHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 71 g~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
+...+.|.|..+ .+.++|.|.|.+|...|+++|+.||.+..+.
T Consensus 325 ~~~~~~F~i~~~---~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 367 (510)
T 3jzy_A 325 SSDEPVFHISHI---DRVYTLRTDNINERTAWVQKIKAASEQYIDT 367 (510)
T ss_dssp ----------------------------------------------
T ss_pred Cccccceeeecc---ceeEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 135678898775 3589999999999999999999998876544
No 104
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=91.08 E-value=1.5 Score=41.16 Aligned_cols=89 Identities=8% Similarity=0.115 Sum_probs=56.0
Q ss_pred eeeEEEEecceeeecccCCCC----C--CCccE-EEEecCceEEeeCCcceecCceeEEEEEEecC--CCcceEEEeecC
Q 019797 25 HMRYFVLESRLLAYYKKKPQD----N--QVPIK-TLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK--EKYHRITMAAFN 95 (335)
Q Consensus 25 ~~RyFVL~g~~l~~YK~~P~~----~--~~Pir-s~vid~~~rVed~Gre~~hg~~~yvf~iyn~~--~~~~~~~laa~s 95 (335)
..||++|=..+|=+=|.+... . .--.+ .+-+ .++.|++.- .+..+.|.|.... .....+.|-|.|
T Consensus 229 ~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l-~~~~v~~~~-----~~~~~~F~i~~~~~~~~~~~~~l~a~s 302 (354)
T 2rgn_B 229 RERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKV-SCLGLEGNL-----QGDPCRFALTSRGPEGGIQRYVLQAAD 302 (354)
T ss_dssp CEEEEEEESSEEEEEEECC--------CCEEEEEEEEG-GGEEEEESG-----GGCTTEEEEEEECSSSCEEEEEEEESS
T ss_pred ceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeec-cceeeeecc-----CCCCceEEEEecCCCCCceEEEEECCC
Confidence 467777777666544443311 0 00111 1223 567777641 1233566666543 246889999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcc
Q 019797 96 IQEALIWKEKIELVIDQHQESQVS 119 (335)
Q Consensus 96 ~eea~~W~~a~~~Ai~q~~~~~~~ 119 (335)
.+|-..|+++|..||.++.+...+
T Consensus 303 ~~ek~~W~~~i~~ai~~~~~~l~a 326 (354)
T 2rgn_B 303 PAISQAWIKHVAQILESQRDFLNA 326 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876443
No 105
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=86.26 E-value=6.1 Score=37.04 Aligned_cols=29 Identities=0% Similarity=0.046 Sum_probs=26.1
Q ss_pred cceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 86 YHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 86 ~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
.+.+.|.|.|.+|-..|+++|+.||.+.+
T Consensus 341 ~~~~~l~A~s~~eK~~W~~~i~~~i~~~~ 369 (377)
T 1foe_A 341 ERVFHLCCSSPESRKDFLKSVHSILRDKH 369 (377)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHHHhhHHh
Confidence 57899999999999999999999987654
No 106
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=85.14 E-value=2.5 Score=46.03 Aligned_cols=93 Identities=16% Similarity=0.242 Sum_probs=60.8
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCC---------CCCccEEEEecCceEEeeCCcceecCceeEE
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQD---------NQVPIKTLLIDGNCRVEDRGLKTHHGHMVYV 76 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~---------~~~Pirs~vid~~~rVed~Gre~~hg~~~yv 76 (335)
.+||.+.+.+.. +.||++|=..+|=+=|.+... .-.--..+-+ .++.|++..-.. ..-+.
T Consensus 445 i~eG~l~~~~~k-------~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L-~~l~V~~~~d~~---~~~~~ 513 (1049)
T 3ksy_A 445 IMEGTLTRVGAK-------HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFM-RKVQINDKDDTN---EYKHA 513 (1049)
T ss_dssp CCEEEEEETTCS-------SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECC-SSCCCCCCCCSS---SCCSE
T ss_pred EEeceEEEEccC-------ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEc-CceEEEECCCCc---cccce
Confidence 488988887632 478888887777666654211 1111122333 556666531111 34578
Q ss_pred EEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 77 LSVYNKKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 77 f~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
|.|..+.. ..++|.|.|.+|-.+|+++|+.+..
T Consensus 514 F~I~~~~~--~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 514 FEIILKDE--NSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp EEECCTTS--CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCC--CEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 88877643 7899999999999999999988743
No 107
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=82.12 E-value=2.3 Score=32.49 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=32.3
Q ss_pred ceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEE
Q 019797 229 AMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEV 270 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~i 270 (335)
.+...-.|+|||++||+.|.|++. -.+|...+...++++.-
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~-~~~w~p~~~~~~~~~~~ 43 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEG-LKPYLKEVESLEVVARE 43 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHH-HGGGCTTEEEEEEEEEE
T ss_pred eEEEEEEeCCCHHHHHHHHhChhh-hhhhcccccEEEEEEeC
Confidence 356678899999999999999973 45898777777777654
No 108
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=79.24 E-value=15 Score=29.23 Aligned_cols=42 Identities=14% Similarity=0.006 Sum_probs=35.6
Q ss_pred ceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEe
Q 019797 229 AMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVD 271 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD 271 (335)
.+...-.|++||++||++|.|++. -.+|-.-....++++.-+
T Consensus 3 ~~~~s~~i~ap~~~v~~~v~D~~~-~p~~~p~~~~~~v~~~~~ 44 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFELVGDVDA-YPKFVPWITGMRTWNGRV 44 (148)
T ss_dssp EEEEEEEESSCTHHHHHHHTTTTC-CSSCCSSCCCCCEEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHHHHhh-HHhhCCCcCeeEEEEecC
Confidence 456778999999999999999973 559988888899998765
No 109
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=78.81 E-value=2.5 Score=35.78 Aligned_cols=45 Identities=7% Similarity=0.179 Sum_probs=36.0
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcc-cccceeeeeeEEEEEeCcccEE
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRY-EWDCSFQYGSLVEEVDGHTAIL 277 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~-eWD~~~~~~~vVE~iD~HtdIv 277 (335)
....-+|+|||++||++|-|++ +| +|---...++++|. |+....+
T Consensus 5 v~~si~I~a~~~~V~~lV~Dve--~yP~~~p~~~~~~vl~~-~~~~~~~ 50 (159)
T 3tl1_A 5 TDNEITIAAPMELVWNMTNDIE--KWPGLFSEYASVEVLGR-DDDKVTF 50 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTCGG--GHHHHCSSEEEEEEEEE-CSSEEEE
T ss_pred eEEEEEecCCHHHHHHHHHhHH--HhhhhhhCceEEEEEec-CCCEEEE
Confidence 3456789999999999999986 55 99999999999988 4443333
No 110
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=71.79 E-value=22 Score=30.53 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=63.6
Q ss_pred eeeeE-EEeeeccc----ccccceeeEEEEec------ceeeecccCCCCCCCccEEEEecCceEEee-CCcceecCcee
Q 019797 7 YEGWM-VRYGRRKI----GRSFIHMRYFVLES------RLLAYYKKKPQDNQVPIKTLLIDGNCRVED-RGLKTHHGHMV 74 (335)
Q Consensus 7 ~EGWl-y~~g~~~~----g~q~~~~RyFVL~g------~~l~~YK~~P~~~~~Pirs~vid~~~rVed-~Gre~~hg~~~ 74 (335)
.||-| |-.+..-- +-.=++++.|||+- -+|.+| ..|... .|-.++-.....-|.. --+|..-....
T Consensus 20 kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy-~PPkss-KpK~~i~cs~I~EVR~tt~LEmPD~~nT 97 (136)
T 1v5m_A 20 REGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFF-VPPKAS-RPKVSIPLSAIIEVRTTMPLEMPEKDNT 97 (136)
T ss_dssp EEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEE-SSTTSS-SCSSCEETTTCCBCCCCCCSSSCCCTTE
T ss_pred eeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEe-cCCccc-CCccccchhhhhhhhhccccccCCccce
Confidence 78877 66664442 34445688888753 467766 666665 6666655432222211 02344444567
Q ss_pred EEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHh
Q 019797 75 YVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVID 111 (335)
Q Consensus 75 yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~ 111 (335)
||+.+.| ...+-|.|.+.+++..|+..|+..++
T Consensus 98 FVlK~~n----~~eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 98 FVLKVEN----GAEYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp ECCBCTT----SCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEecC----CcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence 7776544 45789999999999999999998854
No 111
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=69.96 E-value=5.1 Score=34.21 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=33.6
Q ss_pred EEeeeeecCHHHHHHHhhccCCCcc-cccceeeeeeEEEEEe
Q 019797 231 KAVGVVEASCEEIFELVMSMDGTRY-EWDCSFQYGSLVEEVD 271 (335)
Q Consensus 231 kavgvV~aspe~IFe~lm~~d~~R~-eWD~~~~~~~vVE~iD 271 (335)
...-+|+|||++||++|-|++ +| +|.--....+++|.-+
T Consensus 6 ~~si~I~a~~~~v~~lv~Dv~--~~p~w~p~~~~~~~~~~~~ 45 (169)
T 3tvq_A 6 DNSIVVNAPFELVWDVTNDIE--AWPELFSEYAEAEILRQDG 45 (169)
T ss_dssp EEEEEESSCHHHHHHHHTCGG--GHHHHCTTEEEEEEEEEET
T ss_pred EEEEEecCCHHHHHHHHHhhh--HHHHHHhheeEEEEEecCC
Confidence 456789999999999999986 55 9999999999999843
No 112
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=69.06 E-value=4.5 Score=37.50 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=39.3
Q ss_pred CceEEeeCCcceecCceeEEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 57 GNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 57 ~~~rVed~Gre~~hg~~~yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
..|.|+.. .+.....-+.|.|.. .++...+.|.|.+.+||..|.+||..+|
T Consensus 211 ~m~~~tR~--~~~~d~~~~~fev~s-~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 211 KMAYVSRR--CTPTDPEPRYLEICA-ADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp SSEEEEEE--CCSSCSSSCEEEEEE-TTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ceeeeeee--ccccCCCCceEEEEC-CCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 56666653 111112567899988 5889999999999999999999999985
No 113
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=64.04 E-value=4.9 Score=32.34 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=24.8
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccccceeee
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQY 263 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~ 263 (335)
+...-+|+|||++||++|.|++. -.+|...+..
T Consensus 4 v~~si~I~ap~e~Vw~~l~d~~~-~~~w~p~v~~ 36 (151)
T 2le1_A 4 LRRSVEVAAPAADVWTLVGDFSA-IHRWHPQVSA 36 (151)
T ss_dssp EEEEEEESSCHHHHHHHHTTSGG-GGGTCTTCCC
T ss_pred EEEEEEecCCHHHHHHHHhCcCc-HHHhcCCceE
Confidence 45667899999999999998863 3478654443
No 114
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=61.91 E-value=7.3 Score=32.65 Aligned_cols=33 Identities=9% Similarity=0.270 Sum_probs=27.2
Q ss_pred ceEEeeeeecCHHHHHHHhhccCCCcc-cccceeee
Q 019797 229 AMKAVGVVEASCEEIFELVMSMDGTRY-EWDCSFQY 263 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d~~R~-eWD~~~~~ 263 (335)
.+...-+|+|+|++|+++|-|++ ++ +|+..+..
T Consensus 19 ~i~~si~I~Appe~VW~~ltD~~--~~~~W~p~v~~ 52 (155)
T 3ijt_A 19 KFSFELAVNTKKEDAWTYYSQVN--QWFVWEGDLEQ 52 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGG--GGGGTSTTEEE
T ss_pred EEEEEEEEcCCHHHHHHHHhCcc--cccccchhhEe
Confidence 55567899999999999999886 55 99987654
No 115
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=59.07 E-value=7 Score=33.04 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=24.0
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCccccccee
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDCSF 261 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~ 261 (335)
+.+..+|+|||+.||++|.+.+.. .|.-.+
T Consensus 4 v~~si~I~Ap~~~VW~~v~Df~~~--~w~P~v 33 (160)
T 3p51_A 4 VYNSIVVDAPVERVWSRIRNFHDF--SWAPSL 33 (160)
T ss_dssp EEEEEEESSCHHHHHHHHCCTTCC--TTCTTT
T ss_pred EEEEEEECCCHHHHHHHHhCcCCC--eEccCc
Confidence 456788999999999999988854 887433
No 116
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=58.33 E-value=9.6 Score=31.76 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=34.2
Q ss_pred ceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEe
Q 019797 229 AMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVD 271 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD 271 (335)
.+...-+|+|||++||++|-|++. -.+|---....++++.-+
T Consensus 6 ~v~~si~I~ap~~~V~~~v~D~~~-~p~~~P~~~~~~v~~~~~ 47 (172)
T 3tfz_A 6 HVEHTVTVAAPADLVWEVLADVLG-YADIFPPTEKVEILEEGQ 47 (172)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG-HHHHCSSEEEEEEEEEET
T ss_pred EEEEEEEeCCCHHHHHHHHHhHHH-HHhhCcccceEEEEecCC
Confidence 345567899999999999999973 449998888888888754
No 117
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=54.52 E-value=7.3 Score=32.12 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=25.3
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccccceeeee
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYG 264 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~ 264 (335)
+...-+|+|||+.||++|.+.+. -.+|...+...
T Consensus 4 v~~si~I~Ap~~~VW~~l~d~~~-~~~w~p~v~~~ 37 (146)
T 3f08_A 4 TTTSMEIFGSTEQVWQLIGGFNS-LPDWLPYIPSS 37 (146)
T ss_dssp EEEEEEESSCHHHHHHHHCSTTC-HHHHCTTCCEE
T ss_pred EEEEEEEeCCHHHHHHHHhcccc-HHHhCCCeEEE
Confidence 45677899999999999998874 34776544433
No 118
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=52.41 E-value=72 Score=33.51 Aligned_cols=98 Identities=17% Similarity=0.226 Sum_probs=61.4
Q ss_pred ceeeeEEEeeecccccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCcceecCceeEEEEEEecCCC
Q 019797 6 VYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEK 85 (335)
Q Consensus 6 ~~EGWly~~g~~~~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~hg~~~yvf~iyn~~~~ 85 (335)
.+.|.+.+.|. .-.+-.++|||.|..+.+... ..+ +.|-..+.+++-.+|... +. - .-..|.+=.+ .
T Consensus 560 i~~G~~~k~~g--~f~~~~~rR~~~l~p~r~e~~-~e~---~~~~~l~~~~~v~~v~k~--~i-~--~~~~l~~~~k--~ 626 (689)
T 3v5w_A 560 IMHGYMSKMGN--PFLTQWQRRYFYLFPNRLEWR-GEG---EAPQSLLTMEEIQSVEET--QI-K--ERKCLLLKIR--G 626 (689)
T ss_dssp CEEEEEEEC---------CEEEEEEEETTEEEEE-CTT---SCCCEEEEGGGEEEEEEE--ES-S--SCEEEEEEET--T
T ss_pred eeecccccCCC--cccchhhhhccccCCCccccc-ccC---CCCcceeeeccccccccC--cC-C--CCcceeeeec--C
Confidence 37888888762 223345799999999888743 222 355566777777777652 11 1 1133444333 2
Q ss_pred cceEEEeecCHHHHHHHHHHHHHHHhhhhhh
Q 019797 86 YHRITMAAFNIQEALIWKEKIELVIDQHQES 116 (335)
Q Consensus 86 ~~~~~laa~s~eea~~W~~a~~~Ai~q~~~~ 116 (335)
.++.-+-+.|..++..|.++|+++-.+.++.
T Consensus 627 ~k~f~~~t~~~~~~~~W~~~i~~~~~~~~~~ 657 (689)
T 3v5w_A 627 GKQFILQCDSDPELVQWKKELRDAYREAQQL 657 (689)
T ss_dssp TEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCChHHHHHHHHHHHHHHHHHHHH
Confidence 3456666888999999999999997776655
No 119
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=48.61 E-value=53 Score=34.87 Aligned_cols=98 Identities=7% Similarity=0.134 Sum_probs=57.0
Q ss_pred eEEEeeecccccccceeeEEEEecc--eeeecccCCCCC---CCccEEEEecCceEE------ee-C----CcceecCce
Q 019797 10 WMVRYGRRKIGRSFIHMRYFVLESR--LLAYYKKKPQDN---QVPIKTLLIDGNCRV------ED-R----GLKTHHGHM 73 (335)
Q Consensus 10 Wly~~g~~~~g~q~~~~RyFVL~g~--~l~~YK~~P~~~---~~Pirs~vid~~~rV------ed-~----Gre~~hg~~ 73 (335)
.|.|++.++. +. +.|+|-|..+ .|.++...+... ..=|+.+-.|..++. -+ - .++...
T Consensus 22 ~~~K~~~~~~--~~-k~~~frLd~d~~~l~W~~~~k~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e--- 95 (799)
T 2zkm_X 22 RFIKWDDETT--VA-SPVILRVDPKGYYLYWTYQSKEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFL--- 95 (799)
T ss_dssp EEEEECTTTC--CE-EEEEEEECTTSCEEEEEETTSCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGG---
T ss_pred EEEEEcCCCc--ce-eEEEEEEcCCCCEEEEccCCCcCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccc---
Confidence 4566654443 22 5799999654 555332233212 233566666655542 00 0 011112
Q ss_pred eEEEEEEecCCC--cceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 74 VYVLSVYNKKEK--YHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 74 ~yvf~iyn~~~~--~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
--.|+|+-..+. -+.+-|.|.|.++|..|+..|+..+...
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 225677765443 3578999999999999999999887654
No 120
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=48.56 E-value=8.9 Score=32.49 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=31.2
Q ss_pred EEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEeCc
Q 019797 231 KAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVDGH 273 (335)
Q Consensus 231 kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD~H 273 (335)
...-+|+++|++||+.+.|+.. -.+|-..+.+. +++-++|
T Consensus 30 ~~si~I~ap~eeVy~~~~D~e~-lP~W~~~l~~~--~~~~~~~ 69 (156)
T 2qpv_A 30 IIHLSVEKPWAEVYDFAANPGN-MPRWAAGLAGG--LEADGED 69 (156)
T ss_dssp EEEEEESSCHHHHHHHHHCGGG-GGGTCGGGTTC--CEEETTE
T ss_pred EEEEEEcCCHHHHHHHHHChhh-HHHHHHhhhhh--cccCCCc
Confidence 4567899999999999999973 66999888774 5554443
No 121
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=46.71 E-value=18 Score=28.49 Aligned_cols=29 Identities=14% Similarity=0.077 Sum_probs=23.1
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccccc
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDC 259 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~ 259 (335)
+...-+|+|||+.||+.+.+++. -.+|..
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~~-~~~W~~ 31 (135)
T 3q6a_A 3 IITKMQVDVPRETVFEAFVDPEK-IGGFWF 31 (135)
T ss_dssp EEEEEEESSCHHHHHHHHHCTTT-GGGTSS
T ss_pred EEEEEEeCCCHHHHHHHHcCHHH-hcccCC
Confidence 45567899999999999999874 557743
No 122
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=46.63 E-value=9.6 Score=31.12 Aligned_cols=39 Identities=5% Similarity=0.113 Sum_probs=29.4
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEE
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLV 267 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vV 267 (335)
+-+...-+|+|||++||+++-|+.. -.+|..-....+++
T Consensus 4 ~~v~~s~~I~ap~e~V~~~~~D~e~-~p~w~p~~~~v~~~ 42 (155)
T 3ggn_A 4 TVVRDAVTIGKPAEQLYAVWRDLPG-LPLLMTHLRSVEVL 42 (155)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGG-HHHHSTTCCEEEEC
T ss_pred cEEEEEEEEcCCHHHHHHHHhCHHH-hHHHhhhceEEEEe
Confidence 4566778999999999999999873 44887665544443
No 123
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=44.90 E-value=13 Score=30.76 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=30.5
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccccceeeeeeEEEEEeCc
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGSLVEEVDGH 273 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~vVE~iD~H 273 (335)
+...-+|+|||++||++|-|++. |-.++.+-..+++.|+.
T Consensus 9 v~~s~~I~ap~e~v~~lv~Dve~----w~~~yp~~~p~~~~~~~ 48 (161)
T 3p9v_A 9 LNRDLEIPASYDEVFDLLADVPK----SASHFPKVDKLVDLGNN 48 (161)
T ss_dssp EEEEEEESSCHHHHHHHHTCHHH----HHTTSTTEEEEEEEETT
T ss_pred EEEEEEEcCCHHHHHHHHhChhh----hHhhCCCeEEEEEcCCC
Confidence 34567899999999999998863 66666666666777665
No 124
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=43.26 E-value=13 Score=29.84 Aligned_cols=35 Identities=9% Similarity=-0.055 Sum_probs=25.6
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccccceeeeee
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDCSFQYGS 265 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~~~~~ 265 (335)
+...-.|+|||++||+.|.|++. -.+|........
T Consensus 5 i~~~~~i~ap~e~Vw~~l~D~e~-~~~w~p~~~~~~ 39 (162)
T 2pcs_A 5 GNGSIELKGTVEEVWSKLMDPSI-LSKCIMGCKSLE 39 (162)
T ss_dssp EEEEEEEESCHHHHHHHHTCHHH-HHHHSTTEEEEE
T ss_pred EeeEEEecCCHHHHHHHhcCHHH-HHhhCCCceEeE
Confidence 44567899999999999998862 448875544333
No 125
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=39.51 E-value=39 Score=26.52 Aligned_cols=31 Identities=19% Similarity=0.090 Sum_probs=23.9
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCccccccee
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWDCSF 261 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD~~~ 261 (335)
+...-.|+|||++||+.+.|++. -.+|....
T Consensus 15 i~~~~~i~ap~e~Vw~~l~D~~~-~~~w~p~~ 45 (157)
T 2ns9_A 15 YEGSFEVSKTPEEVFEFLTDPKR-FSRAFPGF 45 (157)
T ss_dssp EEEEEEESSCHHHHHHHHTCHHH-HGGGSTTE
T ss_pred EeeEEEEcCCHHHHHHHHcCHHH-HHhhCCCc
Confidence 44567899999999999999873 34786543
No 126
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=39.27 E-value=15 Score=28.32 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=23.8
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
..+...-.|+|||+.||+.|.+++. ..+|
T Consensus 5 ~~i~~~~~i~ap~e~Vw~~ltd~~~-~~~W 33 (146)
T 2leq_A 5 LIAQVKTVINAPIEKVWEALVNPEI-IKEY 33 (146)
T ss_dssp EEEEEEEEECSCHHHHHHHHSCTTH-HHHH
T ss_pred ceEEEEEEECCCHHHHHHHHcCHHH-hcee
Confidence 4567778999999999999998863 4577
No 127
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=38.15 E-value=88 Score=25.93 Aligned_cols=30 Identities=7% Similarity=0.110 Sum_probs=25.6
Q ss_pred CCcceEEEeecCHHHHHHHHHHHHHHHhhh
Q 019797 84 EKYHRITMAAFNIQEALIWKEKIELVIDQH 113 (335)
Q Consensus 84 ~~~~~~~laa~s~eea~~W~~a~~~Ai~q~ 113 (335)
+...++=|.-.|.+||....+++++||++.
T Consensus 95 ~~~~~~GLnF~se~eA~~F~~~v~~al~~l 124 (126)
T 2jp2_A 95 VDNRKFGLTFQSPADARAFDRGVRKAIEDL 124 (126)
T ss_dssp CSSSEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 334668889999999999999999998765
No 128
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=35.80 E-value=52 Score=29.13 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=30.6
Q ss_pred EEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHH
Q 019797 76 VLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVI 110 (335)
Q Consensus 76 vf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai 110 (335)
.|.|... |+-..+-|=|.+.+||..|.+||...|
T Consensus 143 ~fEv~s~-DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 143 YLEICAA-DGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp EEEEEET-TTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcC-CCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 6788774 999999999999999999999998875
No 129
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=35.76 E-value=32 Score=28.31 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=25.8
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEWDC 259 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~ 259 (335)
+.+...-.|+|||+.||+.+.+++. ..+|-.
T Consensus 13 ~~i~~~~~i~Ap~e~Vw~altdp~~-~~~W~~ 43 (164)
T 3pu2_A 13 TRLEFRRHFAATPEQLWAALTSPAL-LPAWLF 43 (164)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCTTT-GGGTSC
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHH-HhhEeC
Confidence 5788888999999999999999873 556754
No 130
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=33.00 E-value=16 Score=29.44 Aligned_cols=28 Identities=14% Similarity=0.204 Sum_probs=23.0
Q ss_pred ceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 229 AMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
.+...-.|+|||+.||+.+.+++. ..+|
T Consensus 3 ~i~~~~~i~Ap~e~Vw~altdpe~-~~~W 30 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYWNEPAH-IMKW 30 (144)
T ss_dssp SEEEEEEECSCHHHHHHHHHCHHH-HHHH
T ss_pred EEEEEEEECCCHHHHHHHHCCHHH-Hhhc
Confidence 456677899999999999998863 5577
No 131
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=27.99 E-value=1.4e+02 Score=22.88 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=31.1
Q ss_pred ceEEeeCCcceecCceeEEEEEEecCCCcceEEEeec---CHHHHHHHHHHHHHHH
Q 019797 58 NCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAF---NIQEALIWKEKIELVI 110 (335)
Q Consensus 58 ~~rVed~Gre~~hg~~~yvf~iyn~~~~~~~~~laa~---s~eea~~W~~a~~~Ai 110 (335)
+++|..+|.++ |+|+... ..+.+.++||.. |.+||.+--..+...|
T Consensus 27 ~L~V~psG~K~------w~~ryr~-~Gk~~~~~LG~yp~~sL~~AR~~a~~~r~~l 75 (88)
T 3jtz_A 27 YLLVKPGGSRH------WYLKYRI-SGKESRIALGAYPAISLSDARQQREGIRKML 75 (88)
T ss_dssp EEEECTTSCEE------EEEEEEE-TTEEEEEEEEETTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEE------EEEEEEe-CCeEEEEEeECCCCCCHHHHHHHHHHHHHHH
Confidence 36777777654 6666543 356788999875 7888877665555553
No 132
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=27.95 E-value=2.9e+02 Score=23.68 Aligned_cols=93 Identities=15% Similarity=0.221 Sum_probs=63.3
Q ss_pred cccccceeeEEEEecceeeecccCCCCCCCccEEEEecCceEEeeCCccee--------cCceeEEEEEEecCC------
Q 019797 19 IGRSFIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTH--------HGHMVYVLSVYNKKE------ 84 (335)
Q Consensus 19 ~g~q~~~~RyFVL~g~~l~~YK~~P~~~~~Pirs~vid~~~rVed~Gre~~--------hg~~~yvf~iyn~~~------ 84 (335)
.-++..-++=.+|..-.++.|.-+|.+.=.+...|++ |-|.|+=++++ -++++|-..||+.-.
T Consensus 31 ~lf~llG~~C~~lataVaqLy~a~~~~~W~~~~~Gal---~~VkD~~~rsyf~RlvDl~~~~viweqELY~~f~Y~~~r~ 107 (152)
T 1mke_A 31 SLFSFLGKKCVTMSSAVVQLYAADRNCMWSKKCSGVA---CLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRG 107 (152)
T ss_dssp CCSCSSCCCCEEEEEEEEEEEEEETTTEEEEEEEEEE---EEEEETTTTEEEEEEECSSSCSEEEEEECCSSCCCBCSSS
T ss_pred HHHHHhCCCCcEEEEeeEEEEEECCCCceEecCceEE---EEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCC
Confidence 3344445566778888888888877655234456665 66777533332 357888888885432
Q ss_pred -------CcceEEEeecCHHHHHHHHHHHHHHHhhhh
Q 019797 85 -------KYHRITMAAFNIQEALIWKEKIELVIDQHQ 114 (335)
Q Consensus 85 -------~~~~~~laa~s~eea~~W~~a~~~Ai~q~~ 114 (335)
..-.+=|-..|.+||....+++.++|.+-+
T Consensus 108 ~FHtFe~d~c~~GLnFade~EA~~F~~~V~~~l~~~~ 144 (152)
T 1mke_A 108 YFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGRRQ 144 (152)
T ss_dssp SEEEEECSSSEEEEEESSHHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEecCCcEEEEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 234566778899999999999999976643
No 133
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=26.30 E-value=21 Score=28.72 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=19.3
Q ss_pred ceEEeeeeecCHHHHHHHhhccC
Q 019797 229 AMKAVGVVEASCEEIFELVMSMD 251 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d 251 (335)
.+...-.|+|||+.||+.+.+++
T Consensus 3 ~i~~~r~i~Ap~e~Vw~altdp~ 25 (152)
T 3eli_A 3 DLRLEREFAVAPEALFAWVSDGA 25 (152)
T ss_dssp EEEEEEEESSCHHHHHHHTTCHH
T ss_pred eEEEEEEECCCHHHHHHHHcCHH
Confidence 35566789999999999999865
No 134
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=24.89 E-value=28 Score=27.89 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=21.6
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
+...-.|+|||+.||+.+.+++. ..+|
T Consensus 3 i~~~~~i~Ap~e~Vw~altdp~~-~~~W 29 (144)
T 2lgh_A 3 ISIEAHIEQEIEAVWWAWNDPDC-IARW 29 (144)
T ss_dssp EEEEEEESSCHHHHHHHHHCHHH-HTTS
T ss_pred EEEEEEeCCCHHHHHHHhCCHHH-Hhcc
Confidence 34556899999999999998863 5577
No 135
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=24.78 E-value=22 Score=28.21 Aligned_cols=27 Identities=11% Similarity=0.295 Sum_probs=21.2
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
+...-.|+|||+.||+.|.+++. ..+|
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~~-~~~W 29 (142)
T 2lcg_A 3 ITVETTVAAPVGKVWRAYTTPED-IKQW 29 (142)
T ss_dssp EEEEEEESSCHHHHHHHTTCHHH-HHHH
T ss_pred EEEEEEeCCCHHHHHHHhCCHHH-HhcC
Confidence 34556899999999999998863 4577
No 136
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=24.66 E-value=2.1e+02 Score=25.42 Aligned_cols=96 Identities=16% Similarity=0.324 Sum_probs=54.8
Q ss_pred eEEEeeecccccccceeeEEEEecceee-ecccCCC-------CC-------CCccEEEEecCce-EEeeCCc-ceecCc
Q 019797 10 WMVRYGRRKIGRSFIHMRYFVLESRLLA-YYKKKPQ-------DN-------QVPIKTLLIDGNC-RVEDRGL-KTHHGH 72 (335)
Q Consensus 10 Wly~~g~~~~g~q~~~~RyFVL~g~~l~-~YK~~P~-------~~-------~~Pirs~vid~~~-rVed~Gr-e~~hg~ 72 (335)
|..+.+..+. +.+-||+-|..|.=. .|+.-.. -. ..=|++.+.+.+| .+.+.|. +. + +
T Consensus 37 ~F~k~~~~r~---~~k~~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~~kI~ls~Is~V~sg~~~p~~~~~~~~k~-~-~ 111 (203)
T 3a98_B 37 CFRKLNARRR---QDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQ-N-K 111 (203)
T ss_dssp EEECSSCCTT---CCSEEEEEECTTSSEEEEEECCBCSSCBCCBCCSCCEEEGGGEEEEEEGGGSTTC---------C-C
T ss_pred eEeccCCccc---cCceEEEEECCCCceEEEccccccccCCCChhhcccceeHhhhhHhhcCCCCccccccccccc-c-C
Confidence 6666554333 444578888876532 1432221 11 1235566666555 2223332 11 1 1
Q ss_pred ee--EEEEEEecCCCcceEEEeecCHHHHHHHHHHHHHHHhh
Q 019797 73 MV--YVLSVYNKKEKYHRITMAAFNIQEALIWKEKIELVIDQ 112 (335)
Q Consensus 73 ~~--yvf~iyn~~~~~~~~~laa~s~eea~~W~~a~~~Ai~q 112 (335)
.+ ..|+|.... +..+.|=|.|.+++..|..-|.-.+++
T Consensus 112 ~~~~laFSii~~~--~~~L~fvA~s~~~~~~W~DGL~~Llg~ 151 (203)
T 3a98_B 112 EVLELAFSILYDS--NCQLNFIAPDKHEYCIWTDGLNALLGK 151 (203)
T ss_dssp TTGGGEEEEEETT--TEEEEEECSSHHHHHHHHHHHHHHTTC
T ss_pred cccceEEEEecCC--CceEEEecCCHHHHHHHHHHHHHHhcC
Confidence 12 378888653 389999999999999999999988664
No 137
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=24.09 E-value=82 Score=26.60 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=25.6
Q ss_pred cceEEEeecCHHHHHHHHHHHHHHHhhhhh
Q 019797 86 YHRITMAAFNIQEALIWKEKIELVIDQHQE 115 (335)
Q Consensus 86 ~~~~~laa~s~eea~~W~~a~~~Ai~q~~~ 115 (335)
..++=|+..|.|||..+-++++.||++..+
T Consensus 95 ~~~yGL~F~S~~dA~~F~~~~~~Al~~L~~ 124 (130)
T 3syx_A 95 DKKFGLTFQSPADARAFDRGIRRAIEDISQ 124 (130)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHHGGGS
T ss_pred CeEeecccCCHHHHHHHHHHHHHHHHHHhc
Confidence 366788899999999999999999877544
No 138
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=23.60 E-value=24 Score=27.43 Aligned_cols=28 Identities=14% Similarity=0.263 Sum_probs=21.1
Q ss_pred eEEeeeeecCHHHHHHHhhccCCCccccc
Q 019797 230 MKAVGVVEASCEEIFELVMSMDGTRYEWD 258 (335)
Q Consensus 230 ~kavgvV~aspe~IFe~lm~~d~~R~eWD 258 (335)
+...-.|+|||+.||+.+.+++. ..+|-
T Consensus 5 ~~~~~~i~ap~e~Vw~altd~~~-~~~W~ 32 (147)
T 1z94_A 5 IRLHRVLSAPPERVYRAFLDPLA-LAKWL 32 (147)
T ss_dssp EEEEEEESSCHHHHHHHTTCHHH-HHHHS
T ss_pred EEEEEEeCCCHHHHHHHhCCHHH-Hhhcc
Confidence 44456899999999999998752 34664
No 139
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=23.04 E-value=27 Score=27.93 Aligned_cols=29 Identities=24% Similarity=0.356 Sum_probs=22.6
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
..+...-.|+|||+.||+.|.+++. ..+|
T Consensus 5 ~~i~~~~~i~Ap~e~Vw~altd~~~-~~~W 33 (146)
T 1xn5_A 5 PDIKKEVRFNAPIEKVWEAVSTSEG-LAFW 33 (146)
T ss_dssp CCEEEEEEESSCHHHHHHHTTSHHH-HHTT
T ss_pred cEEEEEEEEcCCHHHHHHHHhChhH-HHHh
Confidence 3567778999999999999998752 3355
No 140
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=22.48 E-value=33 Score=28.07 Aligned_cols=29 Identities=10% Similarity=0.237 Sum_probs=23.1
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
..+...-.|+|||+.||+.+.+++. ..+|
T Consensus 12 ~~i~~~~~i~Ap~e~Vw~altdp~~-~~~W 40 (172)
T 2ldk_A 12 LSFSIVAEFDADVKRVWAIWEDPRQ-LERW 40 (172)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCHHH-HHTT
T ss_pred ceEEEEEEeCCCHHHHHHHhCCHHH-HHhc
Confidence 5677788999999999999998652 3355
No 141
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=22.29 E-value=36 Score=28.22 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=23.1
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
..+...-.|+|||+.||+.+.+++. ..+|
T Consensus 22 ~~i~~~r~i~Ap~e~Vw~altdpe~-~~~W 50 (178)
T 1xuv_A 22 QEIIITREFDAPRELVFKAFTDPDL-YTQW 50 (178)
T ss_dssp SEEEEEEEESSCHHHHHHHHHCHHH-HTTT
T ss_pred cEEEEEEEECCCHHHHHHHhCCHHH-HHhC
Confidence 4566667999999999999998863 4466
No 142
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=21.92 E-value=32 Score=27.89 Aligned_cols=31 Identities=13% Similarity=0.151 Sum_probs=24.0
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEWDC 259 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~ 259 (335)
..+...-.|+|||+.||+.+.+++. ..+|-.
T Consensus 9 ~~i~~~~~i~Ap~e~Vw~altdp~~-~~~W~~ 39 (151)
T 3q63_A 9 RTVVVERQISHPPEKLWRALTQPHL-IEEWLM 39 (151)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCHHH-HHHHSC
T ss_pred CeEEEEEEeCCCHHHHHHHHcCHHH-HHhhcC
Confidence 4667778999999999999998752 335643
No 143
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=21.72 E-value=31 Score=27.79 Aligned_cols=29 Identities=21% Similarity=0.423 Sum_probs=23.1
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
..+...-.|+|||+.||+.|.+++. ..+|
T Consensus 10 ~~i~~~~~i~Ap~e~Vw~altd~~~-~~~W 38 (152)
T 2kew_A 10 PDITKSITLEAPIQKVWETVSTSEG-IAKW 38 (152)
T ss_dssp CCEEEEEEECSCHHHHHHHSSSSHH-HHHH
T ss_pred cEEEEEEEECCCHHHHHHHHhCHHH-HHHh
Confidence 4677788999999999999998752 3355
No 144
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=21.21 E-value=30 Score=27.27 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=23.9
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEWDC 259 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eWD~ 259 (335)
..+...-.|+|||+.||+.|.+++. -.+|-.
T Consensus 8 ~~i~~~~~i~ap~e~Vw~~ltd~~~-~~~W~~ 38 (143)
T 1xn6_A 8 NDIKQTIVFNASIQKVWSVVSTAEG-IASWFM 38 (143)
T ss_dssp CCEEEEEEESSCHHHHHHTTSCSHH-HHTTSC
T ss_pred CEEEEEEEEcCCHHHHHHHHhCHhH-HHHhcC
Confidence 4567778999999999999998752 336643
No 145
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=21.20 E-value=33 Score=27.71 Aligned_cols=30 Identities=13% Similarity=0.254 Sum_probs=23.4
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCccccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEWD 258 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eWD 258 (335)
..+...-.|+|||+.||++|.+++. ..+|-
T Consensus 9 ~~i~~~~~i~Ap~e~Vw~altdp~~-~~~W~ 38 (160)
T 2lak_A 9 FVVRREAHLAAPPAAVFALMTDPEK-ILRWM 38 (160)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCHHH-HHHTS
T ss_pred ceEEEEEEeCCCHHHHHHHhcChHH-HhhhC
Confidence 4567778999999999999998752 34664
No 146
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=20.79 E-value=1.9e+02 Score=23.85 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=36.5
Q ss_pred EEeeeeecCHHHHHHHhh-ccCCCcccccceeeeeeEEEEEeC-cccEEEEEEee
Q 019797 231 KAVGVVEASCEEIFELVM-SMDGTRYEWDCSFQYGSLVEEVDG-HTAILYHRLQL 283 (335)
Q Consensus 231 kavgvV~aspe~IFe~lm-~~d~~R~eWD~~~~~~~vVE~iD~-HtdIvy~~~~p 283 (335)
...-.|.+||+.+|..+. +.+.....|-..+...+++|- |+ .--|....+.+
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG-~g~~Gsir~~~~~~ 59 (157)
T 1tw0_A 6 RDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEG-NGGVGTIKKITANE 59 (157)
T ss_dssp EEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEES-SSSTTCEEEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeC-CCCCCeEEEEEeeC
Confidence 445678999999999988 877445666666777777775 43 34566666654
No 147
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=20.30 E-value=35 Score=27.92 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=21.9
Q ss_pred ceEEeeeeecCHHHHHHHhhccCCCccccc
Q 019797 229 AMKAVGVVEASCEEIFELVMSMDGTRYEWD 258 (335)
Q Consensus 229 ~~kavgvV~aspe~IFe~lm~~d~~R~eWD 258 (335)
.+...-.|+|||+.||+.+.+++. ..+|-
T Consensus 10 ~i~~~r~i~Ap~e~Vw~altdp~~-~~~W~ 38 (162)
T 3q64_A 10 TFIIERLYPAPPSKVFFALGNADA-KRRWF 38 (162)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHH-HHHHS
T ss_pred eEEEEEEeCCCHHHHHHHHCCHHH-HhhcC
Confidence 456677899999999999998752 33454
No 148
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=20.23 E-value=35 Score=27.71 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=23.0
Q ss_pred cceEEeeeeecCHHHHHHHhhccCCCcccc
Q 019797 228 RAMKAVGVVEASCEEIFELVMSMDGTRYEW 257 (335)
Q Consensus 228 ~~~kavgvV~aspe~IFe~lm~~d~~R~eW 257 (335)
+.+...-.|+|||+.||+.+.+++. ..+|
T Consensus 14 ~~i~~~~~i~ap~e~Vw~altdp~~-~~~W 42 (171)
T 2il5_A 14 VEVEIEKLYKFSPELVYEAWTKKDL-LKQW 42 (171)
T ss_dssp EEEEEEEEESSCHHHHHHHTTCHHH-HTTT
T ss_pred ceEEEEEEeCCCHHHHHHHHCCHHH-HHhc
Confidence 4567778899999999999998752 3455
Done!