Query 019800
Match_columns 335
No_of_seqs 120 out of 132
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 07:17:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019800.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019800hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sgla_ d.124.1.1 (A:) Trichom 30.3 10 0.00076 30.9 2.0 10 319-328 95-104 (206)
2 d1iyba_ d.124.1.1 (A:) RNase N 27.5 13 0.00094 30.2 2.1 29 300-328 70-103 (208)
3 d1v6ga1 g.39.1.3 (A:1-41) Acti 19.6 14 0.001 24.4 0.6 14 320-333 8-26 (41)
4 g8pch.1 d.3.1.1 (P:,A:) Cathep 18.4 16 0.0012 28.8 0.8 24 258-281 199-228 (228)
5 d1x6aa1 g.39.1.3 (A:8-41) Lim 17.7 9.4 0.00068 24.5 -0.6 9 320-328 1-9 (34)
6 d1s4va_ d.3.1.1 (A:) Vignain ( 17.6 21 0.0015 27.8 1.4 26 258-283 188-223 (224)
7 d1ucda_ d.124.1.1 (A:) Ribonuc 13.0 21 0.0016 28.5 0.2 28 301-328 60-90 (190)
8 d2fnaa1 a.4.5.11 (A:284-356) H 12.9 60 0.0043 23.3 2.7 22 290-311 32-53 (73)
9 d1bola_ d.124.1.1 (A:) Ribonuc 12.5 23 0.0016 29.1 0.2 10 320-329 103-112 (222)
10 d1ansa_ g.11.1.1 (A:) Neurotox 12.3 32 0.0023 20.6 0.8 13 255-268 5-17 (27)
No 1
>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]}
Probab=30.31 E-value=10 Score=30.87 Aligned_cols=10 Identities=40% Similarity=0.757 Sum_probs=8.0
Q ss_pred chhhhhhcCC
Q 019800 319 LKDHWAKHGT 328 (335)
Q Consensus 319 lk~~wa~hgt 328 (335)
.+--|.||||
T Consensus 95 w~hEW~KHGT 104 (206)
T d1sgla_ 95 WGQQYEKHGT 104 (206)
T ss_dssp HHHHHHHTGG
T ss_pred HHHHHHhccc
Confidence 3567999998
No 2
>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]}
Probab=27.50 E-value=13 Score=30.24 Aligned_cols=29 Identities=31% Similarity=0.627 Sum_probs=18.7
Q ss_pred HHHHHHHhhcccCCCCC----ccch-hhhhhcCC
Q 019800 300 NKLLTRLAAEGHDLSHP----VDLK-DHWAKHGT 328 (335)
Q Consensus 300 ~k~l~~l~~eg~~~~~p----~dlk-~~wa~hgt 328 (335)
..||..|...=-+|-.+ .+|= --|.||||
T Consensus 70 ~~l~~~l~~~Wp~l~~~~~~~~~~w~hEW~KHGt 103 (208)
T d1iyba_ 70 SDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGT 103 (208)
T ss_dssp GGGHHHHHHHSCCCCSSCCCSHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHhhcccCccHHHHHHhccccee
Confidence 55777777655555433 3454 44999998
No 3
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.60 E-value=14 Score=24.42 Aligned_cols=14 Identities=29% Similarity=0.349 Sum_probs=11.1
Q ss_pred hhhhhhcCC-----cceee
Q 019800 320 KDHWAKHGT-----NRYIT 333 (335)
Q Consensus 320 k~~wa~hgt-----n~~~t 333 (335)
+|||++.|| +.|||
T Consensus 8 ~DYq~~fG~~C~~C~~~It 26 (41)
T d1v6ga1 8 LDYQRLYGTRCFSCDQFIE 26 (41)
T ss_dssp SCGGGSCCCBCTTTCCBCC
T ss_pred ccHHHHhCcccccccCEee
Confidence 589999987 66765
No 4
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]}
Probab=18.40 E-value=16 Score=28.83 Aligned_cols=24 Identities=33% Similarity=0.958 Sum_probs=18.4
Q ss_pred eccCCcc------cccccccccccccCCCC
Q 019800 258 KWGNGGW------QSACCTTSLSMYPLPAV 281 (335)
Q Consensus 258 ~wg~ggw------qs~cctt~~s~yplp~~ 281 (335)
.||.+|+ .-.|.-.+-..||+|+.
T Consensus 199 ~WG~~Gy~~i~~g~n~cgi~~~~~~p~~~~ 228 (228)
T g8pch.1 199 QWGMNGYFLIERGKNMCGLAACASYPIPLV 228 (228)
T ss_dssp TSTBTTEEEEECSSCGGGTTTSCEEEEECC
T ss_pred CcccCCEEEEEcCCCcccCcccceeccccC
Confidence 5888875 24588788889999984
No 5
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.73 E-value=9.4 Score=24.47 Aligned_cols=9 Identities=56% Similarity=1.110 Sum_probs=7.1
Q ss_pred hhhhhhcCC
Q 019800 320 KDHWAKHGT 328 (335)
Q Consensus 320 k~~wa~hgt 328 (335)
|+||+|-|-
T Consensus 1 kdYw~kfge 9 (34)
T d1x6aa1 1 KDYWGKFGE 9 (34)
T ss_dssp CCSSCCSSC
T ss_pred CcHHHHHHH
Confidence 689999763
No 6
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]}
Probab=17.61 E-value=21 Score=27.82 Aligned_cols=26 Identities=27% Similarity=0.754 Sum_probs=18.8
Q ss_pred eccCCcc----------cccccccccccccCCCCCC
Q 019800 258 KWGNGGW----------QSACCTTSLSMYPLPAVPN 283 (335)
Q Consensus 258 ~wg~ggw----------qs~cctt~~s~yplp~~~~ 283 (335)
.||.+|+ -..|=-.+...||+|-+|+
T Consensus 188 ~WG~~Gy~~i~~g~~~~~n~CgI~~~~~yp~~~~~~ 223 (224)
T d1s4va_ 188 EWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSN 223 (224)
T ss_dssp TSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSC
T ss_pred ccccCceEEEECCCCCCCCcCCccceeeeeeccCCC
Confidence 5888887 2334355678899999886
No 7
>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]}
Probab=13.04 E-value=21 Score=28.52 Aligned_cols=28 Identities=25% Similarity=0.470 Sum_probs=15.8
Q ss_pred HHHHHHhhcccCCCC--Cccc-hhhhhhcCC
Q 019800 301 KLLTRLAAEGHDLSH--PVDL-KDHWAKHGT 328 (335)
Q Consensus 301 k~l~~l~~eg~~~~~--p~dl-k~~wa~hgt 328 (335)
.|+.+|...=-||.. ..+| +.-|.||||
T Consensus 60 ~l~~~L~~~wp~l~~~~~~~~w~hEW~KHGt 90 (190)
T d1ucda_ 60 HLQSQLNTLWPNVLRANNQQFWSHEWTKHGT 90 (190)
T ss_dssp GGHHHHHHHSCCSSSSCHHHHHHHHHHHTGG
T ss_pred hHHHHHHHHhhhhccccChHHHHHHHHhCcc
Confidence 356666544344432 2334 455999998
No 8
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=12.91 E-value=60 Score=23.33 Aligned_cols=22 Identities=27% Similarity=0.368 Sum_probs=18.9
Q ss_pred cccccchHHHHHHHHHHhhccc
Q 019800 290 GGRKMSGSAFNKLLTRLAAEGH 311 (335)
Q Consensus 290 ~grkms~~~f~k~l~~l~~eg~ 311 (335)
-||..+.+.|+.||..|..-|+
T Consensus 32 ~G~~I~d~~ls~lL~nL~k~~~ 53 (73)
T d2fnaa1 32 EGIEISDSEIYNYLTQLTKHSW 53 (73)
T ss_dssp HCSCCCHHHHHHHHHHHHHTTS
T ss_pred cCCCCChHHHHHHHHHHHHcCc
Confidence 4889999999999999986653
No 9
>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}
Probab=12.51 E-value=23 Score=29.06 Aligned_cols=10 Identities=50% Similarity=1.089 Sum_probs=7.7
Q ss_pred hhhhhhcCCc
Q 019800 320 KDHWAKHGTN 329 (335)
Q Consensus 320 k~~wa~hgtn 329 (335)
+.-|.||||=
T Consensus 103 ~hEW~KHGTC 112 (222)
T d1bola_ 103 SHEWSKHGTC 112 (222)
T ss_dssp HHHHHHTGGG
T ss_pred HHHHHhcccc
Confidence 3458999995
No 10
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=12.25 E-value=32 Score=20.58 Aligned_cols=13 Identities=46% Similarity=1.569 Sum_probs=8.3
Q ss_pred cceeccCCcccccc
Q 019800 255 QCYKWGNGGWQSAC 268 (335)
Q Consensus 255 ~cy~wg~ggwqs~c 268 (335)
+|| ||.--|--.|
T Consensus 5 pcy-wggcpwgqnc 17 (27)
T d1ansa_ 5 PCY-WGGCPWGQNC 17 (27)
T ss_dssp CST-TTTCSSSCSS
T ss_pred ccc-ccCCcccccc
Confidence 466 7666676666
Done!