Query 019805
Match_columns 335
No_of_seqs 231 out of 1631
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 07:22:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 3E-38 1E-42 279.7 21.3 276 42-334 4-291 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 2.6E-38 8.8E-43 281.1 14.7 280 41-334 4-297 (507)
3 3s79_A Cytochrome P450 19A1; o 100.0 1.2E-37 4.2E-42 276.4 17.5 267 43-334 42-313 (503)
4 2hi4_A Cytochrome P450 1A2; CY 100.0 3.9E-37 1.3E-41 272.4 19.3 278 41-334 11-300 (495)
5 3qz1_A Steroid 21-hydroxylase; 100.0 5.4E-38 1.9E-42 278.2 13.2 270 39-334 22-297 (496)
6 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.7E-36 9.3E-41 266.0 20.9 273 41-334 5-285 (476)
7 2fdv_A Cytochrome P450 2A6; CY 100.0 4.2E-36 1.4E-40 264.6 20.2 272 43-334 7-286 (476)
8 3czh_A Cytochrome P450 2R1; vi 100.0 3.6E-36 1.2E-40 265.2 19.4 274 43-334 9-291 (481)
9 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.5E-35 5E-40 261.7 22.5 275 38-334 16-301 (482)
10 1po5_A Cytochrome P450 2B4; ox 100.0 5.1E-36 1.8E-40 264.0 18.4 273 42-334 6-286 (476)
11 1r9o_A Cytochrome P450 2C9; mo 100.0 8.1E-36 2.8E-40 262.9 19.6 274 41-334 6-287 (477)
12 3nxu_A Cytochrome P450 3A4; al 100.0 1.5E-36 5.2E-41 268.2 11.8 272 44-334 12-290 (485)
13 3gw9_A Sterol 14alpha-demethyl 100.0 9.1E-36 3.1E-40 260.8 15.8 267 45-334 2-271 (450)
14 3tbg_A Cytochrome P450 2D6; mo 100.0 1.5E-34 5.3E-39 255.0 19.4 278 40-334 4-290 (479)
15 2ij2_A Cytochrome P450 BM3; mo 100.0 4.1E-34 1.4E-38 251.2 21.4 267 45-334 2-271 (470)
16 3ld6_A Lanosterol 14-alpha dem 100.0 9.5E-35 3.3E-39 254.9 14.8 261 44-334 9-270 (461)
17 3n9y_A Cholesterol SIDE-chain 100.0 2.3E-33 8E-38 247.9 20.3 277 40-334 3-293 (487)
18 2ve3_A Putative cytochrome P45 100.0 9.5E-33 3.2E-37 240.9 19.9 257 39-334 5-261 (444)
19 2cib_A Cytochrome P450 51; hem 100.0 2.5E-32 8.6E-37 239.0 17.7 258 46-334 4-263 (455)
20 3i3k_A Lanosterol 14-alpha dem 100.0 1.6E-32 5.3E-37 241.0 14.8 264 40-334 5-270 (461)
21 3dbg_A Putative cytochrome P45 100.0 1.6E-32 5.6E-37 241.1 9.2 257 45-334 22-281 (467)
22 3mdm_A Cholesterol 24-hydroxyl 100.0 4.9E-30 1.7E-34 224.8 21.3 248 64-334 9-261 (456)
23 2cd8_A Cytochrome P450 monooxy 100.0 6.2E-31 2.1E-35 228.4 15.2 243 42-334 22-270 (436)
24 1jfb_A Nitric-oxide reductase 100.0 8.8E-29 3E-33 213.3 19.3 240 47-334 2-247 (404)
25 3v8d_A Cholesterol 7-alpha-mon 100.0 9.7E-31 3.3E-35 231.3 5.1 266 40-334 7-275 (491)
26 1cpt_A Cytochrome P450-TERP; o 100.0 1.2E-28 4.2E-33 213.7 14.8 251 44-334 4-274 (428)
27 2zbx_A Cytochrome P450-SU1; be 100.0 9.4E-28 3.2E-32 207.1 19.6 238 45-334 4-251 (412)
28 1ued_A P450 OXYC, P450 monooxy 100.0 2.2E-28 7.7E-33 210.5 15.1 233 44-334 8-252 (406)
29 1izo_A P450bsbeta, cytochrome 100.0 3.3E-27 1.1E-31 204.3 21.4 239 54-334 8-249 (417)
30 3awm_A Fatty acid alpha-hydrox 100.0 6.8E-27 2.3E-31 202.2 21.4 242 48-334 4-248 (415)
31 2jjn_A Cytochrome P450 113A1; 99.9 4.9E-27 1.7E-31 202.6 16.3 237 38-334 11-248 (411)
32 3aba_A Cytochrome P450; oxidor 99.9 2.6E-26 9E-31 197.5 19.4 222 62-334 16-244 (403)
33 3tkt_A Cytochrome P450; aromat 99.9 5.7E-27 1.9E-31 204.3 15.3 232 67-334 47-296 (450)
34 3oo3_A OXY protein; cytochrome 99.9 1.8E-26 6.1E-31 197.5 17.5 219 64-334 11-233 (384)
35 3tyw_A Putative cytochrome P45 99.9 5.5E-26 1.9E-30 196.4 20.1 221 63-334 27-256 (417)
36 3abb_A CYP105D6, cytochrome P4 99.9 7.6E-27 2.6E-31 201.2 14.5 222 61-334 20-250 (408)
37 3ivy_A Cytochrome P450 CYP125; 99.9 6.5E-27 2.2E-31 203.0 14.0 242 45-334 17-275 (433)
38 2zwu_A Camphor 5-monooxygenase 99.9 1.6E-26 5.3E-31 199.4 16.2 239 41-334 6-256 (415)
39 1s1f_A Putative cytochrome P45 99.9 2E-26 6.8E-31 198.4 15.8 233 46-334 8-248 (406)
40 1odo_A Putative cytochrome P45 99.9 2E-26 6.9E-31 198.6 15.6 227 62-334 12-249 (408)
41 2wm5_A CYP124, putative cytoch 99.9 6.4E-26 2.2E-30 196.7 18.6 227 65-334 44-281 (435)
42 3dax_A Cytochrome P450 7A1; ch 99.9 2E-27 6.8E-32 210.2 8.8 263 41-334 8-275 (491)
43 2y5n_A MYCG, P-450-like protei 99.9 6.5E-26 2.2E-30 195.6 17.2 222 63-334 35-261 (417)
44 1n97_A CYP175A1; electron tran 99.9 1.9E-27 6.4E-32 203.8 7.0 225 50-334 3-228 (389)
45 3ejb_B Biotin biosynthesis cyt 99.9 1.9E-25 6.4E-30 192.5 17.9 225 64-334 12-241 (404)
46 2z36_A MOXA, cytochrome P450 t 99.9 8.8E-26 3E-30 194.6 15.0 236 44-334 5-252 (413)
47 3a4g_A Vitamin D hydroxylase; 99.9 3.9E-25 1.3E-29 190.4 18.5 220 63-334 18-243 (411)
48 4fb2_A P450CIN; heme, monooxyg 99.9 9.8E-26 3.3E-30 193.7 14.6 221 62-334 16-239 (398)
49 2xkr_A CYP142, putative cytoch 99.9 2.2E-25 7.7E-30 191.5 16.8 220 64-334 17-237 (398)
50 1z8o_A 6-deoxyerythronolide B 99.9 3E-25 1E-29 191.0 17.6 221 63-334 12-248 (404)
51 1gwi_A CYP154C1, cytochrome P4 99.9 3.6E-25 1.2E-29 190.8 16.3 222 62-334 14-249 (411)
52 1q5d_A P450 epoxidase; cytochr 99.9 1.1E-25 3.8E-30 194.5 12.6 227 63-334 24-261 (419)
53 2z3t_A Cytochrome P450; monoxy 99.9 4.9E-25 1.7E-29 190.7 16.4 226 64-334 19-261 (425)
54 3r9b_A Cytochrome P450 164A2; 99.9 1.5E-25 5.3E-30 193.9 12.3 228 63-334 27-263 (418)
55 2xbk_A PIMD protein; epoxidati 99.9 2.3E-24 7.8E-29 185.1 19.3 214 63-334 24-248 (404)
56 3b6h_A Prostacyclin synthase; 99.9 3.2E-25 1.1E-29 196.3 14.1 266 40-334 12-280 (498)
57 3lxh_A Cytochrome P450; heme, 99.9 1.2E-24 4.2E-29 188.2 15.5 225 64-334 37-263 (421)
58 2dkk_A Cytochrome P450; CYP158 99.9 3.7E-25 1.3E-29 190.6 10.5 218 64-334 26-251 (411)
59 3b98_A Prostaglandin I2 syntha 99.9 1.5E-25 5E-30 197.4 7.8 256 41-334 13-271 (475)
60 2uuq_A CYP130, cytochrome P450 99.9 1.9E-24 6.5E-29 186.4 14.6 222 64-334 24-257 (414)
61 3oft_A Cytochrome P450, CYP101 99.9 2.8E-24 9.5E-29 184.7 15.0 220 62-334 21-241 (396)
62 3nc3_A Cytochrome P450 CYPX; c 99.9 5.5E-25 1.9E-29 191.2 10.2 224 64-334 52-276 (441)
63 1lfk_A OXYB, P450 monooxygenas 99.9 2.3E-24 7.9E-29 185.1 13.6 214 69-334 17-243 (398)
64 3buj_A CALO2; heme, iron, meta 99.9 3E-24 1E-28 184.4 13.8 221 64-334 12-240 (397)
65 3mgx_A Putative P450 monooxyge 99.9 4.9E-24 1.7E-28 183.7 13.7 219 64-334 36-261 (415)
66 3dsk_A Cytochrome P450 74A, ch 99.9 8.8E-25 3E-29 193.4 3.8 167 41-212 23-206 (495)
67 2wiy_A XPLA-heme, cytochrome P 99.9 9.3E-23 3.2E-27 174.8 16.1 222 64-334 19-240 (394)
68 3rwl_A Cytochrome P450 alkane 99.9 8.8E-23 3E-27 176.5 16.0 225 64-334 37-272 (426)
69 3p3o_A Cytochrome P450; monoox 99.9 2.2E-23 7.5E-28 179.9 8.0 221 64-334 32-260 (416)
70 1n40_A P450 MT2, cytochrome P4 99.9 3.9E-23 1.3E-27 177.3 9.1 217 63-334 14-240 (396)
71 3b4x_A 367AA long hypothetical 99.9 3.4E-22 1.2E-26 169.6 12.0 204 68-334 2-217 (367)
72 3dan_A Cytochrome P450 74A2; A 99.9 4E-22 1.4E-26 175.4 12.4 165 41-211 4-187 (473)
73 1io7_A Cytochrome P450 CYP119; 99.9 7.9E-22 2.7E-26 167.6 11.3 205 67-334 1-216 (368)
74 2rfb_A Cytochrome P450; heme, 99.8 3E-21 1E-25 162.4 10.2 193 76-334 2-195 (343)
75 4dxy_A Cytochrome P450, CYP101 99.8 3.5E-20 1.2E-24 159.4 16.8 225 64-334 36-262 (417)
76 4dnj_A Putative cytochrome P45 99.8 8.5E-20 2.9E-24 157.2 14.0 233 52-334 18-258 (412)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.3 1.3E-09 4.4E-14 91.9 -10.2 133 47-210 35-180 (381)
78 2diu_A KIAA0430 protein; struc 82.9 4.1 0.00014 26.2 5.7 60 55-115 12-75 (96)
79 3lqv_A PRE-mRNA branch site pr 67.7 23 0.00079 23.2 7.7 58 47-106 3-66 (115)
80 2krb_A Eukaryotic translation 64.3 21 0.00072 21.6 7.2 51 56-106 5-66 (81)
81 3d2w_A TAR DNA-binding protein 62.6 22 0.00076 22.1 5.6 53 49-103 8-64 (89)
82 1s79_A Lupus LA protein; RRM, 55.2 39 0.0013 21.8 6.1 53 54-108 13-73 (103)
83 2nlw_A Eukaryotic translation 53.2 42 0.0014 21.5 6.9 53 54-106 17-80 (105)
84 1iqt_A AUF1, heterogeneous nuc 50.4 35 0.0012 20.0 4.8 41 68-108 13-62 (75)
85 2a3j_A U1 small nuclear ribonu 47.4 63 0.0021 21.8 6.3 53 54-106 31-91 (127)
86 1nu4_A U1A RNA binding domain; 47.3 49 0.0017 20.6 5.6 53 54-106 10-70 (97)
87 2dgx_A KIAA0430 protein; RRM d 45.4 54 0.0018 20.5 6.1 53 54-106 11-71 (96)
88 1whv_A Poly(A)-specific ribonu 44.0 55 0.0019 21.1 4.8 39 68-106 29-68 (100)
89 3beg_B Splicing factor, argini 43.6 66 0.0023 21.0 6.0 58 54-113 18-78 (115)
90 2kxn_B Transformer-2 protein h 42.4 76 0.0026 21.4 7.6 54 51-106 45-107 (129)
91 2cqc_A Arginine/serine-rich sp 40.7 63 0.0022 19.9 6.6 54 51-106 14-76 (95)
92 2ad9_A Polypyrimidine tract-bi 40.5 80 0.0027 21.1 6.3 51 53-105 32-85 (119)
93 1x4e_A RNA binding motif, sing 40.3 56 0.0019 19.7 4.7 50 54-105 7-65 (85)
94 2p22_C Protein SRN2; endosome, 39.9 1.1E+02 0.0038 22.6 6.9 57 136-195 110-167 (192)
95 1x4c_A Splicing factor, argini 39.5 74 0.0025 20.4 7.2 51 54-106 17-69 (108)
96 2dnr_A Synaptojanin-1; RRM dom 38.7 74 0.0025 20.2 5.3 45 64-108 25-70 (91)
97 2mss_A Protein (musashi1); RNA 38.6 59 0.002 19.0 5.6 41 68-108 13-62 (75)
98 1sjq_A Polypyrimidine tract-bi 37.8 83 0.0028 20.5 6.3 54 51-106 15-71 (105)
99 3s6e_A RNA-binding protein 39; 37.5 70 0.0024 21.1 5.0 67 48-114 3-83 (114)
100 3s8s_A Histone-lysine N-methyl 35.2 92 0.0031 20.2 5.7 51 54-106 8-67 (110)
101 3s7r_A Heterogeneous nuclear r 35.1 75 0.0026 19.2 4.7 53 54-108 13-74 (87)
102 2pe8_A Splicing factor 45; RRM 33.2 98 0.0033 19.9 5.2 64 51-114 7-84 (105)
103 4fxv_A ELAV-like protein 1; RN 33.1 93 0.0032 19.6 5.6 50 55-106 22-80 (99)
104 1sjr_A Polypyrimidine tract-bi 32.9 1.3E+02 0.0044 21.6 6.0 49 56-106 50-103 (164)
105 2d9o_A DNAJ (HSP40) homolog, s 32.7 98 0.0034 19.8 6.3 39 68-106 31-73 (100)
106 1x4d_A Matrin 3; structural ge 32.5 1E+02 0.0034 19.8 5.7 55 51-106 14-71 (102)
107 2jvr_A Nucleolar protein 3; RN 31.9 1.1E+02 0.0037 20.0 6.0 51 54-106 30-86 (111)
108 2dhg_A TRNA selenocysteine ass 30.4 1E+02 0.0035 19.4 7.0 56 49-106 6-70 (104)
109 3zzy_A Polypyrimidine tract-bi 30.0 1E+02 0.0035 21.0 4.9 51 54-106 30-85 (130)
110 2la6_A RNA-binding protein FUS 30.0 1E+02 0.0035 19.2 7.1 51 54-106 15-82 (99)
111 2d9p_A Polyadenylate-binding p 29.7 1.1E+02 0.0036 19.3 5.9 54 51-106 14-74 (103)
112 1rk8_A CG8781-PA, CG8781-PA pr 29.1 1.5E+02 0.0051 20.8 6.0 50 55-106 75-133 (165)
113 2dnz_A Probable RNA-binding pr 28.9 1E+02 0.0035 18.9 7.4 59 54-114 7-75 (95)
114 2jrs_A RNA-binding protein 39; 28.7 1.2E+02 0.0041 19.5 5.9 51 54-106 28-87 (108)
115 2bz2_A Negative elongation fac 28.0 1.3E+02 0.0045 19.9 5.2 49 54-106 41-92 (121)
116 4h62_V Mediator of RNA polymer 27.6 52 0.0018 15.0 2.9 22 308-329 8-29 (31)
117 2cq3_A RNA-binding protein 9; 27.3 1.2E+02 0.0041 19.0 7.0 51 54-106 17-74 (103)
118 1ghh_A DINI, DNA-damage-induci 27.1 1.1E+02 0.0036 18.9 4.0 38 68-105 23-68 (81)
119 1ufw_A Synaptojanin 2; RNP dom 27.0 1.3E+02 0.0043 19.3 4.9 45 64-108 34-79 (95)
120 2wbr_A GW182, gawky, LD47780P; 26.2 1.3E+02 0.0043 19.0 5.7 51 54-106 9-62 (89)
121 1x5p_A Negative elongation fac 26.2 1.2E+02 0.0041 18.8 6.8 49 54-106 17-68 (97)
122 3bs9_A Nucleolysin TIA-1 isofo 26.2 1.1E+02 0.0038 18.3 5.3 50 55-106 9-67 (87)
123 3v4m_A Splicing factor U2AF 65 25.9 1.4E+02 0.0046 19.2 5.9 47 68-114 29-87 (105)
124 2jwn_A Embryonic polyadenylate 25.2 1.3E+02 0.0044 19.7 4.8 51 56-108 40-99 (124)
125 2ahq_A Sigma-54, RNA polymeras 25.1 80 0.0027 19.2 3.2 24 292-318 24-47 (76)
126 3ctr_A Poly(A)-specific ribonu 24.7 42 0.0014 21.7 2.0 47 69-115 20-69 (101)
127 2dnq_A RNA-binding protein 4B; 24.7 1.2E+02 0.0042 18.4 6.6 51 54-106 10-61 (90)
128 3ex7_B RNA-binding protein 8A; 24.6 1.5E+02 0.0052 19.4 5.8 58 55-114 25-92 (126)
129 1x4f_A Matrin 3; structural ge 24.5 1.3E+02 0.0046 19.7 4.6 53 52-105 25-80 (112)
130 3mdf_A Peptidyl-prolyl CIS-tra 24.4 1.2E+02 0.0041 18.0 6.9 52 53-106 8-68 (85)
131 4f25_A Polyadenylate-binding p 24.3 1.5E+02 0.0051 19.2 5.2 50 55-106 8-64 (115)
132 1whx_A Hypothetical protein ri 24.2 1.5E+02 0.0051 19.1 5.8 59 55-115 13-75 (111)
133 2dgv_A HnRNP M, heterogeneous 24.1 1.3E+02 0.0044 18.3 7.2 51 54-106 10-67 (92)
134 3ns6_A Eukaryotic translation 23.5 1.4E+02 0.0049 18.7 6.0 52 55-106 9-73 (100)
135 2cq1_A PTB-like protein L; RRM 23.5 1.5E+02 0.0051 18.9 5.8 50 54-105 17-69 (101)
136 4f02_A Polyadenylate-binding p 23.2 1.7E+02 0.0058 21.6 5.6 55 51-107 14-77 (213)
137 2do4_A Squamous cell carcinoma 23.1 1.4E+02 0.0049 18.5 6.8 51 54-106 19-77 (100)
138 2dgs_A DAZ-associated protein 22.6 1.5E+02 0.005 18.4 7.8 59 54-114 12-79 (99)
139 2xnq_A Nuclear polyadenylated 22.5 1.5E+02 0.0051 18.5 6.7 50 55-106 25-76 (97)
140 2e5h_A Zinc finger CCHC-type a 22.2 1.4E+02 0.0049 18.2 6.8 51 54-106 18-77 (94)
141 2ywk_A Putative RNA-binding pr 22.1 1.4E+02 0.0049 18.2 4.7 51 54-106 18-76 (95)
142 2dnm_A SRP46 splicing factor; 21.6 1.6E+02 0.0054 18.4 6.6 58 54-113 15-82 (103)
143 2ezv_A Type II restriction enz 21.2 1.6E+02 0.0054 21.8 4.6 49 155-203 20-68 (269)
144 2kvi_A Nuclear polyadenylated 21.2 1.5E+02 0.0053 18.2 6.4 58 54-113 12-72 (96)
145 1p27_B RNA-binding protein 8A; 21.2 1.6E+02 0.0056 18.5 6.1 50 55-106 26-84 (106)
146 3ulh_A THO complex subunit 4; 21.0 1.7E+02 0.0057 18.5 5.9 51 54-106 31-89 (107)
147 1x4h_A RNA-binding protein 28; 20.8 1.7E+02 0.0058 18.5 8.0 51 54-106 17-76 (111)
148 2cpf_A RNA binding motif prote 20.8 1.6E+02 0.0054 18.2 5.2 51 54-106 7-69 (98)
149 2hvz_A Splicing factor, argini 20.4 1.7E+02 0.0057 18.2 5.6 39 68-106 14-56 (101)
150 2dgu_A Heterogeneous nuclear r 20.4 1.7E+02 0.0058 18.3 5.8 51 54-106 13-64 (103)
151 2dnp_A RNA-binding protein 14; 20.3 1.5E+02 0.0053 17.9 7.6 52 53-106 10-62 (90)
152 2adc_A Polypyrimidine tract-bi 20.3 2.7E+02 0.0093 20.7 6.8 58 55-113 37-99 (229)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=3e-38 Score=279.66 Aligned_cols=276 Identities=18% Similarity=0.268 Sum_probs=213.8
Q ss_pred CCCCCCCCCCCCCcccccccccC--cchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh
Q 019805 42 KLNYLPPPGPKPWPLIGNLNLLG--EHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA 119 (335)
Q Consensus 42 ~~~~~~ppgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~ 119 (335)
++..+.||||+++|++||+..+. +.++..+.+|+++|||||++++|+.++|+|+||+++++++.+++..|.+|+....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34567899999999999999883 4678899999999999999999999999999999999999998888988887655
Q ss_pred hcccccCCccccccCCChhHHHHHHHHHHhhcCh--hHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 120 GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSP--KRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
......++.|++++++|+.|+.+||++. +.|+. ..+..+.+.+.++++.+++.+.+. +++++|+.+.+..+++
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~~t~ 158 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATH----NGQSIDISFPVFVAVT 158 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT----TTEEECCHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHc----CCCcccHHHHHHHHHH
Confidence 5555545678888877999999999999 88874 456788999999999999999864 5688999999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHE 277 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 277 (335)
|+|+.++||.+++..+ +....+....+.+........+..++||+++++. ...+++.+..+.+.++++.++++++
T Consensus 159 dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~ 233 (494)
T 3swz_A 159 NVISLICFNTSYKNGD----PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYK 233 (494)
T ss_dssp HHHHHHHHSCCCCTTC----THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCcCCCCC----HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887544 2333344444444444444456678899887742 3456677788888899999998887
Q ss_pred HcccccccCCCCCcHHHHHHhccCCC--------CcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 278 RHGKRKFKERGTNDMVDVLLQLADDP--------TLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 278 ~~~~~~~~~~~~~d~l~~ll~~~~~~--------~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.. +.....|+++.|++...+. .....++++++.+ ++.++++||+|||++
T Consensus 234 ~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~ 291 (494)
T 3swz_A 234 EKF----RSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILT---TIGDIFGAGVETTTS 291 (494)
T ss_dssp TTC----CTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred Hhh----cccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHH---HHHHHhhcchhHHHH
Confidence 655 2345679999999764211 1124599999999 555999999999974
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=281.08 Aligned_cols=280 Identities=21% Similarity=0.301 Sum_probs=198.5
Q ss_pred cCCCCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhh
Q 019805 41 NKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAG 120 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 120 (335)
++++.+.||||+++|++|++..+..+++..+.+++++||+||++++|+.++|+|+||+++++|+.++...|.+++.....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 44567789999999999999998888999999999999999999999999999999999999998887788877765544
Q ss_pred cccccCCccccccCCChhHHHHHHHHHHhhcChhH------HHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHH
Q 019805 121 KHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKR------LAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFM 194 (335)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~------l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~ 194 (335)
.... ++.+++++.+|+.|+++|++++ +.|+... ++.+.+.+.++++++++.+.+... +++++|+.+.+.+
T Consensus 84 ~~~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~ 159 (507)
T 3pm0_A 84 RVVS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSA--DGAFLDPRPLTVV 159 (507)
T ss_dssp HHGG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTG--GGCCBCCHHHHHH
T ss_pred Hhhc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcc--cCCCcChHHHHHH
Confidence 3333 4567877767999999999998 7654332 344889999999999999987654 5678999999999
Q ss_pred HHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccc--cHHHHHHHHHHHHHHHHHHH
Q 019805 195 FNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQ--GNVKRMKAARKKIDKFYEHV 272 (335)
Q Consensus 195 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 272 (335)
+++|+++.++||.+++..+ +....+.+.+...........+...+|++++++.. +..+++.+..+.+.+++.++
T Consensus 160 ~~~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~ 235 (507)
T 3pm0_A 160 AVANVMSAVCFGCRYSHDD----PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDK 235 (507)
T ss_dssp HHHHHHHHHHTSCCCCTTC----HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCCCCC----HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987654 23344444455555554444456678888777321 24567788889999999999
Q ss_pred HHHHHHcccccccCCCCCcHHHHHHhccCCC--C----cCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 273 LDEHERHGKRKFKERGTNDMVDVLLQLADDP--T----LEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 273 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~----~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|+++++... .+..+.|+++.|++..+.+ + .+..++++++.+ ++.++++||+|||++
T Consensus 236 i~~~~~~~~---~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~---~~~~l~~AG~dTta~ 297 (507)
T 3pm0_A 236 FLRHCESLR---PGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPA---TITDIFGASQDTLST 297 (507)
T ss_dssp HHHHHHHCC---TTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhccc---cccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHH---HHHHHHhcccchHHH
Confidence 999988763 2245789999999654321 1 112599999999 556999999999974
No 3
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.2e-37 Score=276.43 Aligned_cols=267 Identities=14% Similarity=0.060 Sum_probs=197.5
Q ss_pred CCCCCCCCCCCCcccccccccC----cchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh
Q 019805 43 LNYLPPPGPKPWPLIGNLNLLG----EHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL 118 (335)
Q Consensus 43 ~~~~~ppgp~~~p~~g~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 118 (335)
++.+.||||+++|++||+..+. ...+..+.+|+++|||||++++|+.++|+++||+++++++.++ .|.+++...
T Consensus 42 ~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~ 119 (503)
T 3s79_A 42 EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSK 119 (503)
T ss_dssp ---CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCH
T ss_pred hccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhh
Confidence 4567899999999999998873 2345678899999999999999999999999999999999653 466665432
Q ss_pred h-hcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 119 A-GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
. .......+.|+++..+|+.|+++||+++ ++|+...++.+.+.+.++++++++.+.+..+ +++++|+.+.+.++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~--~~~~vdl~~~~~~~~~ 196 (503)
T 3s79_A 120 LGLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTN--ESGYVDVLTLLRRVML 196 (503)
T ss_dssp HHHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBC--TTSCBCHHHHHHHHHH
T ss_pred hhhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCeEcHHHHHHHHHH
Confidence 2 2222234577777777999999999999 9999999999999999999999998876544 5678999999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHE 277 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 277 (335)
|+++.++||.+++..+ ....+.+.+.......... ..++.+. ...++..++.+.+.+++.++|++++
T Consensus 197 ~vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~ 263 (503)
T 3s79_A 197 DTSNTLFLRIPLDESA-----IVVKIQGYFDAWQALLIKP---DIFFKIS-----WLYKKYEKSVKDLKDAIEVLIAEKR 263 (503)
T ss_dssp HHHHHHHTCCCCCHHH-----HHHHHHHHHHHHHHHTTCC---HHHHHSG-----GGTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcccCchh-----HHHHHHHHHHHHHHHhcCc---HHHhhcc-----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999875221 1222233333222221111 1111111 1235677888899999999999988
Q ss_pred HcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 278 RHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 278 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+..+.........|+++.|++..+++ .++++++.+ ++.++++||+|||++
T Consensus 264 ~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~---~~~~~~~AG~~Tta~ 313 (503)
T 3s79_A 264 RRISTEEKLEECMDFATELILAEKRG----DLTRENVNQ---CILEMLIAAPDTMSV 313 (503)
T ss_dssp HHHHTCTTTTTTCCHHHHHHHHHHTT----SSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHhhcccccchHHHHHHHHHHhcccC----CCCHHHHHH---HHHHHHHHcccHHHH
Confidence 76542211223459999999875432 599999999 555999999999974
No 4
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=272.38 Aligned_cols=278 Identities=19% Similarity=0.279 Sum_probs=210.8
Q ss_pred cCCCCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhh
Q 019805 41 NKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAG 120 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 120 (335)
+.++.+.+|||+++|++|++..+.++++..+.+++++|||||++++|+.++|+++||+++++|+.+++..|.+++.....
T Consensus 11 ~~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~ 90 (495)
T 2hi4_A 11 VPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS 90 (495)
T ss_dssp CCTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH
T ss_pred CCCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH
Confidence 34445556999999999999888778899999999999999999999999999999999999998776668777654333
Q ss_pred cccccCCcccccc-CCChhHHHHHHHHHHhhcC---hhHH---H---hhHHHHHHHHHHHHHHHHHhcCCCCCCccchHH
Q 019805 121 KHANYDYLVMPGA-PYGPHLRQTRKIYKTELLS---PKRL---A---QFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKE 190 (335)
Q Consensus 121 ~~~~~~~~~~~~~-~~g~~w~~~R~~l~~~~f~---~~~l---~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~ 190 (335)
.... ++.+++++ ++|+.|+++||+++ +.|+ ..++ + .+.+.+.++++++++.|.+.+. +|+++|+.+
T Consensus 91 ~~~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~--~~~~~d~~~ 166 (495)
T 2hi4_A 91 TLIT-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMA--GPGHFDPYN 166 (495)
T ss_dssp HTST-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHH--TTSCBCHHH
T ss_pred HHhc-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhcc--CCCccchHH
Confidence 3222 35678877 45999999999999 7754 3322 2 6889999999999999987443 567899999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHH
Q 019805 191 CVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYE 270 (335)
Q Consensus 191 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 270 (335)
.+..+++|+|+.++||.+++..+ +....+.+.+...........+...+|++++++. ...++..++.+.+.+++.
T Consensus 167 ~~~~~~~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~ 241 (495)
T 2hi4_A 167 QVVVSVANVIGAMCFGQHFPESS----DEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQ 241 (495)
T ss_dssp HHHHHHHHHHHHHHHGGGSCTTC----HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887533 1233444444555444333234556788776632 345677788899999999
Q ss_pred HHHHHHHHcccccccCCCCCcHHHHHHhccCC--CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 271 HVLDEHERHGKRKFKERGTNDMVDVLLQLADD--PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 271 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++|+++++.. +.....|+++.|++...+ ++++..++++|+.+ ++.++++||+|||++
T Consensus 242 ~~i~~r~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~---~~~~l~~AG~dTta~ 300 (495)
T 2hi4_A 242 KTVQEHYQDF----DKNSVRDITGALFKHSKKGPRASGNLIPQEKIVN---LVNDIFGAGFDTVTT 300 (495)
T ss_dssp HHHHHHHHTC----CTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHT---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh----cccccccHHHHHHHHhhhccCccccCCCHHHHHH---HHHHHHHhhhhhHHH
Confidence 9999998864 233457999999964211 11123699999999 566999999999974
No 5
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=5.4e-38 Score=278.23 Aligned_cols=270 Identities=20% Similarity=0.241 Sum_probs=203.9
Q ss_pred hccCCCCCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCch
Q 019805 39 SRNKLNYLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEI 117 (335)
Q Consensus 39 ~~~~~~~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 117 (335)
++..++.+.||||++ ++.+ .++++..+.+++++|||||++++|+.++|+|+||+++++|+.++...|.+++..
T Consensus 22 ~~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~ 95 (496)
T 3qz1_A 22 RWKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQI 95 (496)
T ss_dssp -------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCC
T ss_pred hhhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence 345566789999986 3344 678899999999999999999999999999999999999999887778887765
Q ss_pred hhhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 118 LAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
........+..+++++++|+.|+++||+++ +.|+...++.+.+.+.++++++++.+.+. +|+++|+.+.+..+++
T Consensus 96 ~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~ 170 (496)
T 3qz1_A 96 PSYKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRVQ----AGAPVTIQKEFSLLTC 170 (496)
T ss_dssp TTTTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHTT----CSCCCHHHHHHTHHHH
T ss_pred chHHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHhc----CCCccCHHHHHHHHHH
Confidence 544333333348888877999999999999 99987777789999999999999999863 5789999999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcc--cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGV--LDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDE 275 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 275 (335)
|+|+.++||. ..+ +....+.+.+......... ..+...+|++++++. +..++..+..+.+.+++.++|++
T Consensus 171 dvi~~~~fG~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~ 242 (496)
T 3qz1_A 171 SIICYLTFGN---KED----TLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRR 242 (496)
T ss_dssp HHTTTTSTTC---CCH----HHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC---CCC----hHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 111 1223444444443333222 223456788777642 34567888999999999999999
Q ss_pred HHHcccccccCCCCCcHHHHHHhccCCC---CcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 276 HERHGKRKFKERGTNDMVDVLLQLADDP---TLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 276 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++..+ .....|+++.|++...++ +....++++++.+ ++.++++||+|||++
T Consensus 243 ~~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~---~~~~l~~AG~dTta~ 297 (496)
T 3qz1_A 243 HKESMV----AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHM---SVVDLFIGGTETTAS 297 (496)
T ss_dssp HHHSCC----SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHhhcc----CCCccchHHHHHHHHHhccccCCcccccHHHHHH---HHHHHHHhhhHHHHH
Confidence 988762 345689999999876542 1112699999999 566999999999974
No 6
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=2.7e-36 Score=266.01 Aligned_cols=273 Identities=21% Similarity=0.275 Sum_probs=208.1
Q ss_pred cCCCCCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh
Q 019805 41 NKLNYLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA 119 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~ 119 (335)
.+++.+.||||+++|++||+..+ ..+++..+.+|+++||+||++++|+.++|+|+||+++++|+.++...|.+++....
T Consensus 5 ~~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~ 84 (476)
T 3e6i_A 5 TSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA 84 (476)
T ss_dssp -----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGG
T ss_pred ccCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCch
Confidence 44567789999999999999998 67889999999999999999999999999999999999999988777877765544
Q ss_pred hcccccCCccccccCCChhHHHHHHHHHHhhcChhHH--HhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 120 GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRL--AQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
..... ++ |+++++ |+.|+++||++. +.|+...+ ..+.+.+.++++.+++.+.+. .|+++|+.+.+..+++
T Consensus 85 ~~~~~-~~-~l~~~~-g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~~d~~~~~~~~~~ 156 (476)
T 3e6i_A 85 FHAHR-DR-GIIFNN-GPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKT----QGQPFDPTFLIGCAPC 156 (476)
T ss_dssp GGGGT-TS-SSTTCC-STTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT----TTSCBCTHHHHTHHHH
T ss_pred hheec-CC-CEEecC-CcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHh----CCCCcChHHHHHHHHH
Confidence 43333 23 888887 999999999888 77655433 346789999999999999764 5678999999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhccc--ccccccc-cccccccccHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVL--DIGGAIP-WLAFLDLQGNVKRMKAARKKIDKFYEHVLD 274 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 274 (335)
|+|+.++||.+++..+ +....+...+...+...... .+...+| +++++ ++..++..+..+.+.+++.+.|+
T Consensus 157 dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~ 230 (476)
T 3e6i_A 157 NVIADILFRKHFDYND----EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL--PGSHRKVIKNVAEVKEYVSERVK 230 (476)
T ss_dssp HHHHHHHHSCCCCTTC----HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTS--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987654 23344444554444433221 1223456 55554 34556778888999999999999
Q ss_pred HHHHcccccccCCCCCcHHHHHHhccCCC--CcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 275 EHERHGKRKFKERGTNDMVDVLLQLADDP--TLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 275 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++++... ...+.|+++.|+....++ +.+..++++++.+ +++++++||+|||++
T Consensus 231 ~~~~~~~----~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~ 285 (476)
T 3e6i_A 231 EHHQSLD----PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITV---TVADLFFAGTETTST 285 (476)
T ss_dssp HHHHTCC----TTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHhhcCC----CCCCccHHHHHHHHHHhcccCCCCCcCHHHHHH---HHHHHHhcchHHHHH
Confidence 9988763 334679999999754332 1234699999999 566999999999974
No 7
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=4.2e-36 Score=264.60 Aligned_cols=272 Identities=17% Similarity=0.219 Sum_probs=208.6
Q ss_pred CCCCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhc
Q 019805 43 LNYLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGK 121 (335)
Q Consensus 43 ~~~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~ 121 (335)
++.+.||||+++|++|++..+ ..+++..+.+++++|||||++++|+.++|+++||+++++|+.++...|.+++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred ccCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence 344689999999999999988 6788999999999999999999999999999999999999977665677655433222
Q ss_pred ccccCCccccccCCChhHHHHHHHHHHhhcChhHH--HhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHH
Q 019805 122 HANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRL--AQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAI 199 (335)
Q Consensus 122 ~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~v 199 (335)
... .+.++++++ |+.|+++|+++. +.|+...+ +.+.+.+.++++++++.+.+. +|+++|+.+.+..+++|+
T Consensus 87 ~~~-~~~~l~~~~-g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~~v 159 (476)
T 2fdv_A 87 WVF-KGYGVVFSN-GERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGT----GGANIDPTFFLSRTVSNV 159 (476)
T ss_dssp HHH-TTCSSSSCC-HHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT----TTCCBCCHHHHHHHHHHH
T ss_pred hhc-CCCCeEecC-chHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhc----CCCccChHHHHHHHHHHH
Confidence 222 246788886 999999999999 99987766 789999999999999999764 457899999999999999
Q ss_pred HHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhccc--cccccccc-ccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 200 MSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVL--DIGGAIPW-LAFLDLQGNVKRMKAARKKIDKFYEHVLDEH 276 (335)
Q Consensus 200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 276 (335)
++.++||.+++..+ +....+.+.+.......... .+...+|+ ++++ ++..++..++.+.+.+++.++|+++
T Consensus 160 i~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~~~~~~i~~r 233 (476)
T 2fdv_A 160 ISSIVFGDRFDYKD----KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL--PGPQQQAFQLLQGLEDFIAKKVEHN 233 (476)
T ss_dssp HHHHHHSSCCCTTC----HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcCCCCC----HHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987543 13344555455544332211 12335665 4444 3445677788889999999999998
Q ss_pred HHcccccccCCCCCcHHHHHHhccCC--CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 277 ERHGKRKFKERGTNDMVDVLLQLADD--PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 277 ~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++.. +...+.|+++.|++...+ ++++..++++++.+ +++++++||+|||++
T Consensus 234 ~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~ 286 (476)
T 2fdv_A 234 QRTL----DPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM---TTLNLFIGGTETVST 286 (476)
T ss_dssp HTTC----CTTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHhc----CCCCCccHHHHHHHHHHhcccCccccccHHHHHH---HHHHHHHhccccHHH
Confidence 8754 233467999999976421 11124699999999 566999999999974
No 8
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=3.6e-36 Score=265.18 Aligned_cols=274 Identities=21% Similarity=0.298 Sum_probs=207.7
Q ss_pred CCCCCCCCCCCCcccccccccCcc---hhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh
Q 019805 43 LNYLPPPGPKPWPLIGNLNLLGEH---LHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA 119 (335)
Q Consensus 43 ~~~~~ppgp~~~p~~g~~~~~~~~---~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~ 119 (335)
++.+.||||+++|++|++..+... ++..+.+++++|||||++++|+.++|+|+||+++++|+.++...|.+++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 456789999999999999877333 78899999999999999999999999999999999999887667877764433
Q ss_pred hcccccCCccccccCCChhHHHHHHHHHHhhcChhHH--HhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 120 GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRL--AQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
...+. ++.|+++..+|+.|+++|++++ +.|+...+ ..+.+.+.++++.+++.+.+. +|+++|+.+.+.++++
T Consensus 89 ~~~~~-~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~~d~~~~~~~~~~ 162 (481)
T 3czh_A 89 FMKMT-KMGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETY----KGRPFDFKQLITNAVS 162 (481)
T ss_dssp HHHHH-TTCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT----TTCCBCCHHHHHHHHH
T ss_pred HHhhc-CCCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHc----CCCCcCHHHHHHHHHH
Confidence 33332 2346666555999999999999 88876543 578899999999999999764 4568999999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccc--cccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLD--IGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDE 275 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 275 (335)
|+++.++||.+++..+ +....+.+.+........... +...+|++++++. ...++..++.+.+.+++.++|++
T Consensus 163 ~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~ 237 (481)
T 3czh_A 163 NITNLIIFGERFTYED----TDFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEK 237 (481)
T ss_dssp HHHHHHHHSSCCCTTC----HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887433 233445555555554333211 3446787765532 34567778888999999999999
Q ss_pred HHHcccccccCCCCCcHHHHHHhccCC--CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 276 HERHGKRKFKERGTNDMVDVLLQLADD--PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 276 ~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.. +...+.|+++.|++...+ ++++..++++|+.+ ++.++++||+|||++
T Consensus 238 r~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~---~~~~l~~AG~dTta~ 291 (481)
T 3czh_A 238 ASVNR----KPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIF---SVGELIIAGTETTTN 291 (481)
T ss_dssp HHTTC----CTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhc----CCCchHHHHHHHHHHHHhcccCccccccHHHHHH---HHHHHHHhccchHHH
Confidence 98764 233467999999976422 11124699999999 566999999999974
No 9
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=1.5e-35 Score=261.75 Aligned_cols=275 Identities=17% Similarity=0.212 Sum_probs=210.9
Q ss_pred hhccCCCCCCCCCCCCCccccccccc-----CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccC
Q 019805 38 FSRNKLNYLPPPGPKPWPLIGNLNLL-----GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFA 112 (335)
Q Consensus 38 ~~~~~~~~~~ppgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~ 112 (335)
+....++.+.+|||+++|++||+..+ .++++..+.+++++|||||++++|+.+.|+++||+++++|+.++. .|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTES-AHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTCC-SSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhcC-CCC
Confidence 34567788899999999999999877 246788999999999999999999999999999999999998754 677
Q ss_pred CCCchhh---hcccccCCccccccCCChhHHHHHHHHHHhhc-ChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccch
Q 019805 113 TRPEILA---GKHANYDYLVMPGAPYGPHLRQTRKIYKTELL-SPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHL 188 (335)
Q Consensus 113 ~~~~~~~---~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~ 188 (335)
+++.... .......+.|+++.+ |+.|+++||.+. +.| +.+.++.+.+.+.++++.+++.+.+.... +|+++|+
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~-~g~~vd~ 171 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQ-KKLMKPVEIMKLDKKINEVLADFLERMDELCDE-RGRIPDL 171 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHH-HHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCT-TSCCTTH
T ss_pred CCCCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhh-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCH
Confidence 7654321 122222457888887 999999999999 764 88889999999999999999999876421 3568999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccc--cccccccccHHHHHHHHHHHHH
Q 019805 189 KECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIP--WLAFLDLQGNVKRMKAARKKID 266 (335)
Q Consensus 189 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~~~~~~~~~~~~~~~~~~~ 266 (335)
.+.+.++++|+|+.++||.+++..++........+.+.+.......... ..+| +++++. ....++..+..+.+.
T Consensus 172 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~~~l~-~~~~~~~~~~~~~~~ 247 (482)
T 3k9v_A 172 YSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKM---MVTPVELHKRLN-TKVWQAHTLAWDTIF 247 (482)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGG---SSSCHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHH---HhhhHHHHHhcC-CHHHHHHHHHHHHHH
Confidence 9999999999999999999997654322234567777777766544322 2233 222222 234456677788889
Q ss_pred HHHHHHHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 267 KFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 267 ~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.++|+++++... .....|++..++.. ..++++|+.+ ++.++++||+|||++
T Consensus 248 ~~~~~~i~~r~~~~~----~~~~~d~l~~ll~~-------~~l~~~ei~~---~~~~~~~AG~dTta~ 301 (482)
T 3k9v_A 248 KSVKPCIDNRLQRYS----QQPGADFLCDIYQQ-------DHLSKKELYA---AVTELQLAAVETTAN 301 (482)
T ss_dssp HHHHHHHHHHHHHTT----TCTTSCHHHHHHHH-------TCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----cCCchHHHHHHHhc-------cCCCHHHHHH---HHHHHHHhhhhhHHH
Confidence 999999999887652 23457899888874 1489999999 566999999999974
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=5.1e-36 Score=264.02 Aligned_cols=273 Identities=19% Similarity=0.252 Sum_probs=203.4
Q ss_pred CCCCCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhh
Q 019805 42 KLNYLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAG 120 (335)
Q Consensus 42 ~~~~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~ 120 (335)
+++.+.||||+++|++|++..+ ..+++..+.+++++|||||++++|+.++|+++||+++++|+.++...|.+++.....
T Consensus 6 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 1po5_A 6 SSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVV 85 (476)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGG
T ss_pred cCCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 3445689999999999999988 678899999999999999999999999999999999999998766667765543322
Q ss_pred cccccCCccccccCCChhHHHHHHHHHHhhcChh--HHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHH
Q 019805 121 KHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPK--RLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLA 198 (335)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~ 198 (335)
.... .+.++++++ |+.|+++||++. +.|+.. .++.+.+.+.++++++++.+.+. .|+++|+.+.+..+++|
T Consensus 86 ~~~~-~~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~~d~~~~~~~~~~~ 158 (476)
T 1po5_A 86 DPIF-QGYGVIFAN-GERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKS----KGALLDNTLLFHSITSN 158 (476)
T ss_dssp CSCC-SSCCCCCSS-HHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT----TTCCBCCHHHHHHHHHH
T ss_pred Hhhc-CCCceEecC-CcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhc----CCCccCHHHHHHHHHHH
Confidence 2222 346788886 999999999998 888776 45778999999999999999864 45789999999999999
Q ss_pred HHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhccc--cccccccc-ccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 019805 199 IMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVL--DIGGAIPW-LAFLDLQGNVKRMKAARKKIDKFYEHVLDE 275 (335)
Q Consensus 199 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 275 (335)
+|+.++||.+++..+ +....+.+.+.......... .+...+|+ ++++ +...++..++.+.+.+++.++|++
T Consensus 159 vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~ 232 (476)
T 1po5_A 159 IICSIVFGKRFDYKD----PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEK 232 (476)
T ss_dssp HHHHHHHSSCCCTTC----HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS--SCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCC----HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc--CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887543 12223333333322111111 11235565 3433 333466778888999999999999
Q ss_pred HHHcccccccCCCCCcHHHHHHhccCC--CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 276 HERHGKRKFKERGTNDMVDVLLQLADD--PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 276 ~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.. ++..+.|+++.|+....+ ++++..++++++.+ ++.++++||+|||++
T Consensus 233 r~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~ 286 (476)
T 1po5_A 233 HRATL----DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL---TVLSLFFAGTETTST 286 (476)
T ss_dssp HHTTC----CTTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhc----CCCCcccHHHHHHHHHHhhccCCCCCCCHHHHHH---HHHHHHhhccccHHH
Confidence 98754 233457999999864321 11123589999999 566999999999974
No 11
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=8.1e-36 Score=262.87 Aligned_cols=274 Identities=18% Similarity=0.220 Sum_probs=196.8
Q ss_pred cCCCCCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh
Q 019805 41 NKLNYLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA 119 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~ 119 (335)
++++.+.||||+++|++|++..+ ..+++..+.+++++|||||++++|+.+.|+++||+++++|+.++...|.+++....
T Consensus 6 ~~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~ 85 (477)
T 1r9o_A 6 SSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL 85 (477)
T ss_dssp ---CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSC
T ss_pred ccCCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchh
Confidence 34445689999999999999988 56788999999999999999999988999999999999999776656776554322
Q ss_pred hcccccCCccccccCCChhHHHHHHHHHHhhcChh--HHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 120 GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPK--RLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
..... .+.++++++ |+.|+++||++. +.|+.. .++.+.+.+.++++.+++.+.+. .++++|+.+.+..+++
T Consensus 86 ~~~~~-~~~~l~~~~-g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~~ 158 (477)
T 1r9o_A 86 AERAN-RGFGIVFSN-GKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKT----KASPCDPTFILGCAPC 158 (477)
T ss_dssp CCTTT-CTTSSTTCC-HHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT----TTSCBCTHHHHHHHHH
T ss_pred hhhcc-CCCceEecC-ChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhc----CCCccChHHHHHHHHH
Confidence 22222 346788776 999999999998 888876 44678999999999999999764 4578999999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhccc--cccccccc-ccccccccHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVL--DIGGAIPW-LAFLDLQGNVKRMKAARKKIDKFYEHVLD 274 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 274 (335)
|+|+.++||.+++..+ +....+.+.+.......... .+...+|+ ++++ +...++..++.+.+.+++.++|+
T Consensus 159 ~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--p~~~~~~~~~~~~~~~~~~~~i~ 232 (477)
T 1r9o_A 159 NVICSIIFHKRFDYKD----QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYILEKVK 232 (477)
T ss_dssp HHHHHHHHSCCCCTTC----HHHHHHHHHHHHHHHHHTCCBC-------CCCSCC--TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCCCCC----HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987543 12334444444444322211 12345676 3333 33346677788899999999999
Q ss_pred HHHHcccccccCCCCCcHHHHHHhccCC--CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 275 EHERHGKRKFKERGTNDMVDVLLQLADD--PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 275 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++++.. +...+.|+++.|++...+ ++.+..++++++.+ +++++++||+|||++
T Consensus 233 ~r~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~ 287 (477)
T 1r9o_A 233 EHQESM----DMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLEN---TAVDLFGAGTETTST 287 (477)
T ss_dssp HHHHTC----CTTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhcc----CCCCchHHHHHHHHHHHhhhccCCCCCCHHHHHH---HHHHHhhcccccHHH
Confidence 998764 233457999999864321 11124699999999 566999999999974
No 12
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=1.5e-36 Score=268.21 Aligned_cols=272 Identities=13% Similarity=0.189 Sum_probs=193.7
Q ss_pred CCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhc-CCccCCCCchhhhcc
Q 019805 44 NYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTH-DLTFATRPEILAGKH 122 (335)
Q Consensus 44 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~-~~~~~~~~~~~~~~~ 122 (335)
+.+.||||+++|++||+..+..+++.++.+|+++|||||++++|+.++|+|+||+++++|+.++ ...|.+++.......
T Consensus 12 k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~ 91 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF 91 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG
T ss_pred hhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc
Confidence 3457999999999999999977889999999999999999999999999999999999999887 456766654432221
Q ss_pred cccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHH
Q 019805 123 ANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSR 202 (335)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~ 202 (335)
.+.++++.+ |+.|+++||+++ ++|+.++++.+.+.+.++++++++.+.+... +|+++|+.+.+..+++|+|+.
T Consensus 92 ---~~~~l~~~~-g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~--~g~~~d~~~~~~~~~~dvi~~ 164 (485)
T 3nxu_A 92 ---MKSAISIAE-DEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAE--TGKPVTLKDVFGAYSMDVITS 164 (485)
T ss_dssp ---GGGSTTTCC-HHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCCEEHHHHHHHHHHHHHHH
T ss_pred ---cccCccccC-CcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcCcHHHHHHHHHHHHHHH
Confidence 246777776 999999999999 9999999999999999999999999986544 578999999999999999999
Q ss_pred HHhcccccCCCcCCCCChHHHHHHHHHHHHhhccc---cccccccccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 203 MLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVL---DIGGAIPWLAFL-DLQGNVKRMKAARKKIDKFYEHVLDEHER 278 (335)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 278 (335)
++||.+++..++ ..+.+.+.+.......... .....+|++.++ ...+.........+.+.++++++++++.+
T Consensus 165 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T 3nxu_A 165 TSFGVNIDSLNN----PQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 240 (485)
T ss_dssp HHHSCCCCGGGC----TTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCccccccC----CCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh
Confidence 999999887542 1223433333222111000 011233433221 00000000123344555566666665544
Q ss_pred cccccccCCCCCcHHHHHHhccCCCC--cCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 279 HGKRKFKERGTNDMVDVLLQLADDPT--LEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 279 ~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.. .....|+++.|++...+++ .+..++++|+.+ +++++++||+|||++
T Consensus 241 ~~-----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~---~~~~l~~AG~dTTa~ 290 (485)
T 3nxu_A 241 DT-----QKHRVDFLQLMIDSQNSKETESHKALSDLELVA---QSIIFIFAGYETTSS 290 (485)
T ss_dssp CC--------CCCHHHHHHHHHC--------CCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred cc-----CCCcccHHHHHHHhhhccccccccCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 32 3456799999998754321 134699999999 566999999999974
No 13
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=9.1e-36 Score=260.85 Aligned_cols=267 Identities=13% Similarity=0.116 Sum_probs=212.3
Q ss_pred CCCCCCCCC-CcccccccccCcchhHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcc
Q 019805 45 YLPPPGPKP-WPLIGNLNLLGEHLHLSFHSLSQKYG-PLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKH 122 (335)
Q Consensus 45 ~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (335)
.+.||||++ +|++||+..+..+++.++.+++++|| +||++++|+.++|+|+||+++++++.++...|.+++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467999665 99999999887788999999999999 9999999999999999999999999987777777654433322
Q ss_pred cccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHH-HHHHhcCCCCCCccchHHHHHHHHHHHHH
Q 019805 123 ANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMC-KLYKLSSSSYSTPVHLKECVFMFNLAIMS 201 (335)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~d~~~~~~~~~~~vi~ 201 (335)
.. +.|+++..+|+.|+++|++++ +.|+..+++.+.+.+.++++++++ .+.+ .++++|+.+.+..+++++++
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~-----~~~~vd~~~~~~~~~~~~i~ 153 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK-----DEGEINLLEDCSTMIINTAC 153 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS-----SEEEEEHHHHHHHHHHHHHH
T ss_pred Hh--cCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCcccHHHHHHHHHHHHHH
Confidence 22 456766656999999999999 999999999999999999999998 5543 34679999999999999999
Q ss_pred HHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 019805 202 RMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGK 281 (335)
Q Consensus 202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 281 (335)
.++||.+++... ....+.+.+........ .....+|++++++. +..++..++.+.+.+++.++|+++++...
T Consensus 154 ~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 225 (450)
T 3gw9_A 154 QCLFGEDLRKRL-----DARRFAQLLAKMESSLI--PAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEV 225 (450)
T ss_dssp HHHSCHHHHHHS-----CHHHHHHHHHHHHHTCC--GGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCcchhhhh-----hhHHHHHHHHHHHhccc--cchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999886543 23556666655543322 23446788876643 34567778889999999999999886532
Q ss_pred ccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 282 RKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 282 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
. ++....|+++.|++...+++ ..++++++.+ +++++++||+|||++
T Consensus 226 ~--~~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~---~~~~~~~AG~dTta~ 271 (450)
T 3gw9_A 226 N--KDSSTSDLLSGLLSAVYRDG--TPMSLHEVCG---MIVAAMFAGQHTSSI 271 (450)
T ss_dssp H--TSCCCCSHHHHHHHCBCTTS--CBCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred c--cCCccchHHHHHHHhhccCC--CCCCHHHHHH---HHHHHHHHhhhHhHH
Confidence 1 23557899999998765433 4699999999 566999999999974
No 14
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=1.5e-34 Score=255.03 Aligned_cols=278 Identities=18% Similarity=0.227 Sum_probs=199.4
Q ss_pred ccCCCCCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh
Q 019805 40 RNKLNYLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL 118 (335)
Q Consensus 40 ~~~~~~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 118 (335)
+..++.+.||||+++|++||++.+ ..+++..+.+|+++|||||++++|+.++|+|+||+++++||.+++..|.+|+...
T Consensus 4 ~~ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~ 83 (479)
T 3tbg_A 4 KTSSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP 83 (479)
T ss_dssp -----CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG
T ss_pred CCCCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH
Confidence 344556799999999999999988 6788889999999999999999999999999999999999998888888887665
Q ss_pred hhcccc--cCCccccccCCChhHHHHHHHHHHhhcChhHHHh--hHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHH
Q 019805 119 AGKHAN--YDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQ--FEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFM 194 (335)
Q Consensus 119 ~~~~~~--~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~ 194 (335)
....+. ..+.+++++.+|+.|+++|+.+. +.|+...+.. +.+.+......+...+... .++.+|+.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~ 158 (479)
T 3tbg_A 84 ITQILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFANH----SGRPFRPNGLLDK 158 (479)
T ss_dssp GGGGGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT----TTCCBCTHHHHHH
T ss_pred HHHHhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHhc----cCCcccHHHHHHH
Confidence 554443 23456777777999999999999 8887665542 4566666677777666654 5678999999999
Q ss_pred HHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccc--cccccccccccccccHHHHHHHHHHHHHHHHHHH
Q 019805 195 FNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLD--IGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHV 272 (335)
Q Consensus 195 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (335)
+++|+++.++||..++..+. ....+.+............. ....+|+..++ ....++.....+...+++.+.
T Consensus 159 ~~~~~~~~~~fg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 232 (479)
T 3tbg_A 159 AVSNVIASLTCGRRFEYDDP----RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDEL 232 (479)
T ss_dssp HHHHHHHHHHHSCCCCTTCH----HHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCcccccch----hhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987652 23333333333333222111 11223333332 334455666777778888888
Q ss_pred HHHHHHcccccccCCCCCcHHHHHHhccC--CCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 273 LDEHERHGKRKFKERGTNDMVDVLLQLAD--DPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 273 i~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++++.+... ......|+++.++.... ..+....++++++.+ ++.++++||+||||+
T Consensus 233 ~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~ 290 (479)
T 3tbg_A 233 LTEHRMTWD---PAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRI---VVADLFSAGMVTTST 290 (479)
T ss_dssp HHHHHHHCC---TTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhhh---cccccchhhhhhhhhhhhcccCCccchhhHHHHH---HHHHHHHhhhhhhHH
Confidence 888777653 23445677766654321 112235799999999 566999999999974
No 15
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=4.1e-34 Score=251.23 Aligned_cols=267 Identities=13% Similarity=0.132 Sum_probs=198.3
Q ss_pred CCCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhccc
Q 019805 45 YLPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHA 123 (335)
Q Consensus 45 ~~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 123 (335)
.+.||||+++|++||+..+ ..+++..+.+++++|||||++++++.+.|+|+||+++++|+.+. .|.+... .....+
T Consensus 2 ~~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~ 78 (470)
T 2ij2_A 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFV 78 (470)
T ss_dssp -CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHH
T ss_pred CCCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHH
Confidence 3578999999999999888 45788889999999999999999999999999999999999653 2533221 111111
Q ss_pred -ccCCcccccc-CCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHH
Q 019805 124 -NYDYLVMPGA-PYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMS 201 (335)
Q Consensus 124 -~~~~~~~~~~-~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~ 201 (335)
...+.++++. .+|+.|+++||+++ ++|+..+++.+.+.+.++++++++.|.+.. +++++|+.+.+..+++|+|+
T Consensus 79 ~~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~vd~~~~~~~~~~~vi~ 154 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLN---ADEHIEVPEDMTRLTLDTIG 154 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCC---TTCCEEHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhhC---CCCeEEHHHHHHHHHHHHHH
Confidence 1124677776 45999999999999 999999999999999999999999997532 45689999999999999999
Q ss_pred HHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 019805 202 RMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGK 281 (335)
Q Consensus 202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 281 (335)
.++||.+++..+. +....+.+.+...+....... ...|++.+++ ....++..++.+.+.+++.++|+++++..
T Consensus 155 ~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~- 227 (470)
T 2ij2_A 155 LCGFNYRFNSFYR---DQPHPFITSMVRALDEAMNKL--QRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKASG- 227 (470)
T ss_dssp HHHHSCCCCGGGC---SSCCHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHcCCccccccc---CCCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 9999999875421 122345555544433221111 0113443331 23345667778889999999999888643
Q ss_pred ccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 282 RKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 282 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
..+.|+++.|++..++++ +..++++++.+ +++++++||+|||++
T Consensus 228 -----~~~~dll~~ll~~~~~~~-~~~ls~~ei~~---~~~~~~~AG~dTta~ 271 (470)
T 2ij2_A 228 -----EQSDDLLTHMLNGKDPET-GEPLDDENIRY---QIITFLIAGHETTSG 271 (470)
T ss_dssp -----CCCSSHHHHHHHCCCTTT-CCCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred -----cCchhHHHHHHhccCccc-CCCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 345799999998754321 24699999999 566999999999974
No 16
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=9.5e-35 Score=254.90 Aligned_cols=261 Identities=13% Similarity=0.126 Sum_probs=202.0
Q ss_pred CCCCCCCCCC-CcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcc
Q 019805 44 NYLPPPGPKP-WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKH 122 (335)
Q Consensus 44 ~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (335)
..+.||+|++ +|++||++.+..+++.++.+++++|||||++++|+.++|+|+||+++++++.+++..|..++.......
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 4567888775 999999999988899999999999999999999999999999999999999988777776654332211
Q ss_pred cccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHH
Q 019805 123 ANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSR 202 (335)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~ 202 (335)
.. .+.++++..+|+.|+++|+++. ++|+...++.+.+.+.++++++++.|.+ +..+|+.+.+..+++++++.
T Consensus 89 ~~-~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~ 160 (461)
T 3ld6_A 89 PV-FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE------SGEKNVFEALSELIILTASH 160 (461)
T ss_dssp HH-HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS------EEEEEHHHHHHHHHHHHHHH
T ss_pred cc-CCCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHHHHHHH
Confidence 11 2467776666999999999999 9999999999999999999999888753 45789999999999999999
Q ss_pred HHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q 019805 203 MLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKR 282 (335)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 282 (335)
++||.+++...+ ..+......+...+.. ....+|.+. + .+..++..++.+.+.+++.+.|+++++..
T Consensus 161 ~~fG~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~--~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-- 227 (461)
T 3ld6_A 161 CLHGKEIRSQLN------EKVAQLYADLDGGFSH--AAWLLPGWL--P-LPSFRRRDRAHREIKDIFYKAIQKRRQSQ-- 227 (461)
T ss_dssp HHTCHHHHHTCC------HHHHHHHHHHHTTSSH--HHHHSCTTS--C-CHHHHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred HHcCcchhhhhh------hhhhhhhhhhhhhhhh--HHHhhhhhc--c-CcHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 999998765431 3444444443332221 111233222 2 23445667888899999999998887643
Q ss_pred cccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 283 KFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 283 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+..+|+++.|+++..+++ ..++++|+.+ +++++++||+|||++
T Consensus 228 ----~~~~d~l~~ll~~~~~~~--~~ls~~ei~~---~~~~~~~aG~dTt~~ 270 (461)
T 3ld6_A 228 ----EKIDDILQTLLDATYKDG--RPLTDDEVAG---MLIGLLLAGQHTSST 270 (461)
T ss_dssp ----CCCCSHHHHHHTCBCTTS--CBCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred ----CCCcchhhhhHHhhhccc--CCCCHHHHHH---HHHhhhhcccccccc
Confidence 456899999998876543 4699999999 555999999999974
No 17
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=2.3e-33 Score=247.94 Aligned_cols=277 Identities=16% Similarity=0.130 Sum_probs=200.6
Q ss_pred ccCCCCCCCCCCCCCccccccccc-----CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCC
Q 019805 40 RNKLNYLPPPGPKPWPLIGNLNLL-----GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATR 114 (335)
Q Consensus 40 ~~~~~~~~ppgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~ 114 (335)
+..++++.+|||++.++. +++.+ ..+++..+.+++++|||||++++|+.+.|+|+||+++++|+.+++ .|.++
T Consensus 3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r 80 (487)
T 3n9y_A 3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPER 80 (487)
T ss_dssp -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCC
T ss_pred CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCC
Confidence 356788889999987765 55544 246788899999999999999999999999999999999998765 67777
Q ss_pred Cchhhh---cccccCCccccccCCChhHHHHHHHHHHh-hcChhHHHhhHHHHHHHHHHHHHHHHHhcC--CCCCCccch
Q 019805 115 PEILAG---KHANYDYLVMPGAPYGPHLRQTRKIYKTE-LLSPKRLAQFEYMRVEERKAFMCKLYKLSS--SSYSTPVHL 188 (335)
Q Consensus 115 ~~~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~l~~~-~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~d~ 188 (335)
+..... ......+.++++.+ |+.|+++||+++ + +|+.++++.+.+.+.++++++++.|.+... ..++.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~ 158 (487)
T 3n9y_A 81 FLIPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALN-QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDI 158 (487)
T ss_dssp CCCHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHH-HHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECC
T ss_pred CCCcHHHHHHHHccccCCCccCC-cHHHHHHHHhcC-cccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccH
Confidence 643321 11222456777776 999999999999 7 599999999999999999999999976421 003568999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhccccccccccc--ccccccccHHHHHHHHHHHHH
Q 019805 189 KECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPW--LAFLDLQGNVKRMKAARKKID 266 (335)
Q Consensus 189 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~ 266 (335)
.+.+.++++|+|+.++||.+++..++...+....+.+.+......... ...+|. ++++. ....++..+..+.+.
T Consensus 159 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~-~~~~~~~~~~~~~~~ 234 (487)
T 3n9y_A 159 SDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFR-TKTWKDHVAAWDVIF 234 (487)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcc-cHHHHHHHHHHHHHH
Confidence 999999999999999999999866532222334455555555443321 223342 22221 233445556666677
Q ss_pred HHHHHHHHHHHHcccccc-cCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 267 KFYEHVLDEHERHGKRKF-KERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 267 ~~~~~~i~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.++|+++++...... ......|+++.|++. ..++++++.+ ++.++++||+|||++
T Consensus 235 ~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~l~~~ei~~---~~~~~~~AG~dTta~ 293 (487)
T 3n9y_A 235 SKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD-------SKMSFEDIKA---NVTEMLAGGVDTTSM 293 (487)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS-------CSSCHHHHHH---HHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhc-------CCCCHHHHHH---HHHHHHHHhhhhHHH
Confidence 777777776654432110 123457999999973 1489999999 566999999999974
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=9.5e-33 Score=240.93 Aligned_cols=257 Identities=15% Similarity=0.131 Sum_probs=191.6
Q ss_pred hccCCCCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh
Q 019805 39 SRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL 118 (335)
Q Consensus 39 ~~~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 118 (335)
..+.++.+.||||+++|++|++..+..++. ++.+++++|||||++++++.+.|+++||+++++|+.++...|+.+....
T Consensus 5 p~~~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 83 (444)
T 2ve3_A 5 PTNLNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLS 83 (444)
T ss_dssp ----CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHH
T ss_pred CCCCCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHH
Confidence 344567789999999999999988755566 7889999999999999888889999999999999987754565322111
Q ss_pred hhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHH
Q 019805 119 AGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLA 198 (335)
Q Consensus 119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~ 198 (335)
..... +..++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+ ++++|+.+.+..+++|
T Consensus 84 -~~~~~-g~~~l~~~~-g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~------~~~vd~~~~~~~~~~~ 153 (444)
T 2ve3_A 84 -TRILL-GPNALATQM-GEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK------ANEVIWYPQLRRMTFD 153 (444)
T ss_dssp -HHHHH-CTTSGGGCC-HHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH------SSEEEHHHHHHHHHHH
T ss_pred -HHHHh-CccccccCC-chHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC------CCcEeHHHHHHHHHHH
Confidence 11111 234777766 999999999999 9999999999999999999999999853 4689999999999999
Q ss_pred HHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 199 IMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHER 278 (335)
Q Consensus 199 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 278 (335)
+++.++|| +.... . .++.+.+......... +...+|+ ...++..++.+.+.+++.++|+++++
T Consensus 154 vi~~~~fG-~~~~~------~-~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~ 216 (444)
T 2ve3_A 154 VAATLFMG-EKVSQ------N-PQLFPWFETYIQGLFS--LPIPLPN-------TLFGKSQRARALLLAELEKIIKARQQ 216 (444)
T ss_dssp HHHHHHTC-HHHHS------C-TTHHHHHHHHHHHHSS--CCCCSTT-------SHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC-CCccc------H-HHHHHHHHHHHHHHhc--CCccCCC-------cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999 33221 1 2334444433332211 1111221 12345667788899999999999876
Q ss_pred cccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 279 HGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 279 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.. ....|+++.|++..++++ ..++++++.+ +++++++||+|||++
T Consensus 217 ~~------~~~~d~l~~ll~~~~~~~--~~l~~~~i~~---~~~~~~~AG~~Tt~~ 261 (444)
T 2ve3_A 217 QP------PSEEDALGILLAARDDNN--QPLSLPELKD---QILLLLFAGHETLTS 261 (444)
T ss_dssp SC------CCCSSHHHHHHHCBCTTS--CBCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CC------CCccCHHHHHHhccccCC--CCCCHHHHHH---HHHHHHHHcchHHHH
Confidence 42 346799999998765432 4699999999 566999999999974
No 19
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=2.5e-32 Score=238.98 Aligned_cols=258 Identities=12% Similarity=0.142 Sum_probs=179.5
Q ss_pred CCCCC-CCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccc
Q 019805 46 LPPPG-PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHAN 124 (335)
Q Consensus 46 ~~ppg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~ 124 (335)
+.||| |+++|++|++..+..+++.++.+++++|||||++++++.++++++||+++++|+.+++..|.+++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 57898 77899999998887788999999999999999999999999999999999999987655676665432222121
Q ss_pred cCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHH
Q 019805 125 YDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRML 204 (335)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 204 (335)
+.+++ .+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|.+ ++++|+.+.+..+++|+++.++
T Consensus 84 --g~~~~-~~-~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~~------~~~vd~~~~~~~~~~~vi~~~~ 152 (455)
T 2cib_A 84 --GEGVV-FD-ASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWGE------AGEIDLLDFFAELTIYTSSACL 152 (455)
T ss_dssp --C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS------EEEEEHHHHHHHHHHHHHHHHH
T ss_pred --CCccc-cC-cHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhCC------CCcEeHHHHHHHHHHHHHHHHH
Confidence 23543 45 999999999999 9999999999999999999999988642 3579999999999999999999
Q ss_pred hcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Q 019805 205 FGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKF 284 (335)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 284 (335)
||.+++...+ ..+.+.+..+..... .+...+||+. ....++..++.+.+.+++.++|+++++....
T Consensus 153 fG~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-- 218 (455)
T 2cib_A 153 IGKKFRDQLD------GRFAKLYHELERGTD--PLAYVDPYLP----IESFRRRDEARNGLVALVADIMNGRIANPPT-- 218 (455)
T ss_dssp TCHHHHTTCC------HHHHHHHHHHHTTCC--GGGGTCTTCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred cCCCcchhhh------HHHHHHHHHHHhhhh--HHHHhcccCC----ChhHHHHHHHHHHHHHHHHHHHHHHHhcccC--
Confidence 9999875431 355555555433211 1222345432 1234566678889999999999999876421
Q ss_pred cCCCCCcHHHHHHhccCCCCcCCC-CCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 285 KERGTNDMVDVLLQLADDPTLEVK-LERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 285 ~~~~~~d~l~~ll~~~~~~~~~~~-l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.....|+++.|++..++++ .. ++++++.+ +++++++||+|||++
T Consensus 219 -~~~~~dll~~ll~~~~~~~--~~~l~~~~i~~---~~~~l~~AG~eTta~ 263 (455)
T 2cib_A 219 -DKSDRDMLDVLIAVKAETG--TPRFSADEITG---MFISMMFAGHHTSSG 263 (455)
T ss_dssp ----CCCHHHHHHHCBCTTS--SBSCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred -CCCcccHHHHHHHhhhhcC--CCCCCHHHHHH---HHHHHHHhccccHHH
Confidence 1123499999998765432 34 99999999 566999999999974
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=1.6e-32 Score=240.96 Aligned_cols=264 Identities=14% Similarity=0.148 Sum_probs=199.3
Q ss_pred ccCCCCCCCCC-CCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh
Q 019805 40 RNKLNYLPPPG-PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL 118 (335)
Q Consensus 40 ~~~~~~~~ppg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 118 (335)
...++.+.||| |+++|++||+..+..+++.++.+++++|||||++++++.+.|+|++|+++++++.++...+..++...
T Consensus 5 ~~~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 5 TLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp -----CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred cCCCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 34456788999 88999999999887788999999999999999999999999999999999999988765555432221
Q ss_pred h-hcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 119 A-GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 119 ~-~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
. .... .+.|+++..+|+.|+++||++. +.|+...++.+.+.+.+++.++++.|.+ +..+|+.+.+..+++
T Consensus 85 ~~~~~~--~g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~------~~~~dl~~~~~~~~~ 155 (461)
T 3i3k_A 85 RLTTPV--FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE------SGEKNVFEALSELII 155 (461)
T ss_dssp HHHHHH--HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS------EEEEEHHHHHHHHHH
T ss_pred Hhhhhh--cCCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh------cCCcCHHHHHHHHHH
Confidence 1 1111 2467777766999999999999 9999999999999999999999988753 345899999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHE 277 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 277 (335)
++++.++||.++....+ ..+.+.+..+...... ....+|. |++ .+..++..++.+.+.+++.++|++++
T Consensus 156 ~~~~~~~~G~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~P~--~l~-~~~~~~~~~~~~~~~~~~~~~i~~~~ 224 (461)
T 3i3k_A 156 LTASHCLHGKEIRSQLN------EKVAQLYADLDGGFSH--AAWLLPG--WLP-LPSFRRRDRAHREIKDIFYKAIQKRR 224 (461)
T ss_dssp HHHHHHHTCHHHHHTCC------HHHHHHHHHHHTTSSH--HHHHSCT--TSC-CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHccHhhhhHHH------HHHHHHHHHHHhcccc--chhhccc--ccC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988764321 3344444433322111 1112331 222 23445677888899999999999887
Q ss_pred HcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 278 RHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 278 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.. ....|+++.|++...+++ ..++++++.+ +++++++||+|||++
T Consensus 225 ~~~------~~~~d~l~~ll~~~~~~~--~~l~~~~i~~---~~~~l~~ag~~Tt~~ 270 (461)
T 3i3k_A 225 QSQ------EKIDDILQTLLDATYKDG--RPLTDDEVAG---MLIGLLLAGQHTSST 270 (461)
T ss_dssp TCC------CCCCSHHHHHHTCBCTTS--CBCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred hcc------cccccHHHHHHHhhhccC--CCCCHHHHHH---HHHHHHhhccHHHHH
Confidence 643 446899999998765433 4699999999 555999999999974
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.97 E-value=1.6e-32 Score=241.10 Aligned_cols=257 Identities=17% Similarity=0.195 Sum_probs=170.7
Q ss_pred CCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCcc-CCCCchhhhccc
Q 019805 45 YLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTF-ATRPEILAGKHA 123 (335)
Q Consensus 45 ~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~-~~~~~~~~~~~~ 123 (335)
...||||+++|++||+..+..+++.++.++++ |||||++++|+.++++|+||+++++|+.++ .| .+.+........
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~ 98 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL 98 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence 45689999999999999887788999999988 999999999999999999999999999876 35 332222222222
Q ss_pred ccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHH
Q 019805 124 NYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRM 203 (335)
Q Consensus 124 ~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~ 203 (335)
. +..++++.+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|. +++++|+.+.+..+++++++.+
T Consensus 99 ~-g~~~l~~~d-g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~------~~~~~d~~~~~~~~~~~vi~~~ 169 (467)
T 3dbg_A 99 L-GKEGVATAN-GPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQ------PGKTVDATSESFRVAVRVAARC 169 (467)
T ss_dssp -------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSC------TTSCEEHHHHHHHHHHHHHHHH
T ss_pred c-CCCCcccCC-cHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhc------cCCcCcHHHHHHHHHHHHHHHH
Confidence 1 226777776 999999999999 999999999999999999999999884 3578999999999999999999
Q ss_pred HhcccccCCCcCCCCChHHHHHHHHHHHHhhccccccccccc--ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 019805 204 LFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPW--LAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGK 281 (335)
Q Consensus 204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 281 (335)
+||.+++.. ....+...+......... ...+|+ +.+++ .+..++..++.+.+.+++.++|+++++..
T Consensus 170 ~~g~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~- 238 (467)
T 3dbg_A 170 LLRGQYMDE------RAERLCVALATVFRGMYR---RMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEIIAERRASG- 238 (467)
T ss_dssp HSCSSCCHH------HHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTCC-
T ss_pred HhCCcccch------hHHHHHHHHHHHHHHHHH---HhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 999987642 234555555555443221 123342 23322 12345666778889999999998887643
Q ss_pred ccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 282 RKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 282 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
....|+++.|++..++++ ..++++++.+ +++++++||+|||++
T Consensus 239 -----~~~~dll~~ll~~~~~~~--~~ls~~ei~~---~~~~l~~AG~eTTa~ 281 (467)
T 3dbg_A 239 -----QKPDDLLTALLEAKDDNG--DPIGEQEIHD---QVVAILTPGSETIAS 281 (467)
T ss_dssp -----SSCCSHHHHHTTC----------CHHHHHH---HHHHHHHHHHHHHHH
T ss_pred -----CCchHHHHHHHhhccCCC--CCCCHHHHHH---HHHHHHHHhHHHHHH
Confidence 346799999998765432 3699999999 556999999999974
No 22
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.97 E-value=4.9e-30 Score=224.80 Aligned_cols=248 Identities=14% Similarity=0.164 Sum_probs=184.8
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh-h-cccc--cCCccccccCCChhH
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA-G-KHAN--YDYLVMPGAPYGPHL 139 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~~~~~~g~~w 139 (335)
+..++..+.+|+++|||||++++|+.+.|+|+||+++++|+.++ .|.+++.... . .... ..+.|+++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 44678889999999999999999999999999999999999743 3554433211 1 1111 124677777569999
Q ss_pred HHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHhcccccCCCcCCCCC
Q 019805 140 RQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVT 219 (335)
Q Consensus 140 ~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~ 219 (335)
+++||+++ ++|+.++++.+.+.+.++++++++.+.+... +++++|+.+.+..+++|+++.++||.+++..++ .
T Consensus 87 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~----~ 159 (456)
T 3mdm_A 87 HKQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKAD--GQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG----A 159 (456)
T ss_dssp HHHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCS--SSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT----C
T ss_pred HHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc----c
Confidence 99999999 9999999999999999999999999988654 567999999999999999999999999876542 2
Q ss_pred hHHHHHHHHHHHHhhccccccccccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHh
Q 019805 220 PKELTEIVEEVFFLSGVLDIGGAIPWLAFLDL-QGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQ 298 (335)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 298 (335)
...+...+......+... ..|++.+++. ....++..+..+.+.+++.++|+++++.... ....+.|+++.|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~~~~d~l~~ll~ 233 (456)
T 3mdm_A 160 QKPLSQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKR--GEEVPADILTQILK 233 (456)
T ss_dssp CHHHHHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccchhhHHHHHHH
Confidence 244555555444332211 1223333311 1123455677788888999999988876532 22346799999998
Q ss_pred ccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 299 LADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 299 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
..+ ..++++++.+ +++++++||+|||++
T Consensus 234 ~~~-----~~~~~~~l~~---~~~~l~~AG~dTTa~ 261 (456)
T 3mdm_A 234 AEE-----GAQDDEGLLD---NFVTFFIAGHETSAN 261 (456)
T ss_dssp HTS-----SCSSSHHHHH---HHHHHHHHTTHHHHH
T ss_pred hcC-----CCCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 653 2588999999 566999999999974
No 23
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.97 E-value=6.2e-31 Score=228.38 Aligned_cols=243 Identities=12% Similarity=0.157 Sum_probs=178.0
Q ss_pred CCCCCCCCCCCCCccccccc-ccCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh
Q 019805 42 KLNYLPPPGPKPWPLIGNLN-LLGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPEILA 119 (335)
Q Consensus 42 ~~~~~~ppgp~~~p~~g~~~-~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~ 119 (335)
++..+.||||+++|++|++. .+..+++.++.++ ++|||||++++ ++.++|+++||+++++|+.++ .|.+++....
T Consensus 22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 34456799999999999976 4567788999999 99999999997 778899999999999999876 4766643211
Q ss_pred hccc---ccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHH
Q 019805 120 GKHA---NYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMF 195 (335)
Q Consensus 120 ~~~~---~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~ 195 (335)
.... ...+.++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+. .++++|+.+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~~~ 172 (436)
T 2cd8_A 99 TPLTEAEAALNHNMLESD-PPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLAA----PDGRADLMESLAWPL 172 (436)
T ss_dssp SCCCTTGGGTCCSGGGCC-TTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHTC----TTSCEEHHHHTTTHH
T ss_pred cccccccccccccccccC-chHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCcchHHHHHHHH
Confidence 1110 11246777766 999999999999 99999999999999999999999999752 35789999977 579
Q ss_pred HHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Q 019805 196 NLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDE 275 (335)
Q Consensus 196 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 275 (335)
++++++. +||.+.+. ...+.+....+... . + + ++..++.+.+.+++.++|++
T Consensus 173 ~~~vi~~-~~G~~~~~--------~~~~~~~~~~~~~~------~---~-------~---~~~~~~~~~~~~~~~~~i~~ 224 (436)
T 2cd8_A 173 PITVISE-LLGVPEPD--------RAAFRVWTDAFVFP------D---D-------P---AQAQTAMAEMSGYLSRLIDS 224 (436)
T ss_dssp HHHHHHH-HHTCCGGG--------HHHHHHHHHHHHSC------S---S-------T---THHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhCCCHHH--------HHHHHHHHHHHhcc------C---C-------H---HHHHHHHHHHHHHHHHHHHH
Confidence 9999998 69987542 23455544443321 0 0 1 34567788899999999988
Q ss_pred HHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 276 HERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 276 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.. ..|+++.|++..+++ +..++++|+.+ ++.++++||+|||++
T Consensus 225 r~~~~--------~~d~l~~ll~~~~~~--~~~ls~~ei~~---~~~~l~~AG~eTta~ 270 (436)
T 2cd8_A 225 KRGQD--------GEDLLSALVRTSDED--GSRLTSEELLG---MAHILLVAGHETTVN 270 (436)
T ss_dssp HTTSC--------CCSHHHHHHHHHHHC--TTTSCHHHHHH---HHHHHHHTTHHHHHH
T ss_pred HhcCC--------CCCHHHHHHHhhhcc--CCCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 87632 469999999765431 13699999999 566999999999974
No 24
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.96 E-value=8.8e-29 Score=213.26 Aligned_cols=240 Identities=11% Similarity=0.122 Sum_probs=176.9
Q ss_pred CCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHhcC-CccCCCCchhhhcc--
Q 019805 47 PPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-LNIMVVCSSAEVAELFLKTHD-LTFATRPEILAGKH-- 122 (335)
Q Consensus 47 ~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~~p~~~~~i~~~~~-~~~~~~~~~~~~~~-- 122 (335)
.||||+++|++|++.. +++..+.+++ +||||+++.++ |.+.++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999775 7888898886 59999999874 566777899999999998764 12333332221110
Q ss_pred --cccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHH
Q 019805 123 --ANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIM 200 (335)
Q Consensus 123 --~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi 200 (335)
...++.++++.+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|.+... +++++|+.+.+...+.+++
T Consensus 78 ~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~~d~~~~~~~~~~~~i 153 (404)
T 1jfb_A 78 KQAAKAKPTFVDMD-PPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGC--ANGPVDLVKEFALPVPSYI 153 (404)
T ss_dssp HHHTTSCCCGGGCC-TTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCS--TTSCEEHHHHTTTHHHHHH
T ss_pred cchhcccCcccccC-chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCccHHHHHHHHHHHHH
Confidence 112335677776 999999999999 9999999999999999999999999987543 4578999999999999999
Q ss_pred HHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 019805 201 SRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHG 280 (335)
Q Consensus 201 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 280 (335)
+..+||.+.+. .++......... .+. +..++..++.+.+.+++.++|+++++..
T Consensus 154 ~~~~~G~~~~~---------~~~~~~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 207 (404)
T 1jfb_A 154 IYTLLGVPFND---------LEYLTQQNAIRT-----------NGS------STAREASAANQELLDYLAILVEQRLVEP 207 (404)
T ss_dssp HHHHHTCCGGG---------HHHHHHHHHHHH-----------CTT------SCHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHcCCCHHH---------HHHHHHHHHHHh-----------ccC------cchHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999987642 122222222110 000 1234566778889999999999987743
Q ss_pred cccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 281 KRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 281 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.+|+++.|++...++ ..++++|+.+ ++.++++||+|||++
T Consensus 208 --------~~d~l~~ll~~~~~~---~~l~~~ei~~---~~~~l~~AG~eTt~~ 247 (404)
T 1jfb_A 208 --------KDDIISKLCTEQVKP---GNIDKSDAVQ---IAFLLLVAGNATMVN 247 (404)
T ss_dssp --------CSSHHHHHHHHTTTT---TSSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred --------CCcHHHHHHHhhccC---CCCCHHHHHH---HHHHHHHHhhhhHHH
Confidence 469999999654332 2699999999 566999999999974
No 25
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.96 E-value=9.7e-31 Score=231.31 Aligned_cols=266 Identities=11% Similarity=0.064 Sum_probs=189.1
Q ss_pred ccCCCCCCCCCCCC-CcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCC-ccCCCCch
Q 019805 40 RNKLNYLPPPGPKP-WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDL-TFATRPEI 117 (335)
Q Consensus 40 ~~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~-~~~~~~~~ 117 (335)
.++++.+.||||++ +|++||+..+..+++.++.+++++|||||++++|+.++|+|++|+++++++.++.. .+..++..
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~ 86 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHH
Confidence 34556779999998 69999999998899999999999999999999999999999999999999976542 22222111
Q ss_pred hhhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcC-CCCCCccchHHHHHHHH
Q 019805 118 LAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSS-SSYSTPVHLKECVFMFN 196 (335)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~ 196 (335)
.....+ + .+.+...+|+.|+++|+.+. ++|++++++.+.+.+.+++.++++.+..... ...+..+++.+.+..++
T Consensus 87 ~~~~~~--g-~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~ 162 (491)
T 3v8d_A 87 LSAKAF--G-HRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHH--T-CCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred HHHHhc--C-CcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence 112222 2 23333334999999999998 9999999999999999999999985532211 00235689999999999
Q ss_pred HHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 197 LAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEH 276 (335)
Q Consensus 197 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 276 (335)
+++++..+||.+....+ .....+.+.++.+.. +...+|++.+.......++..++.+++.+++.+.+.++
T Consensus 163 ~~~~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~ 232 (491)
T 3v8d_A 163 FEAGYLTIFGRDLTRRD----TQKAHILNNLDNFKQ------FDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQK 232 (491)
T ss_dssp HHHHHHHHHCBCCSCGG----GHHHHHHHHHHHHHH------HHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTT
T ss_pred HHHHHHHHcCccccccc----hhhhhhHHHHHHHHH------HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999876533 122334444433332 12233333221112334566677777777666555433
Q ss_pred HHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 277 ERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 277 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+ ....|+++.++...++++ .++++|+.+ +++.+++||+|||++
T Consensus 233 ~---------~~~~d~l~~l~~~~~~~~---~~~~~ei~~---~~~~~~~ag~~tt~~ 275 (491)
T 3v8d_A 233 R---------ESISELISLRMFLNDTLS---TFDDLEKAK---THLVVLWASQANTIP 275 (491)
T ss_dssp C---------BSCCHHHHHHHHHHHHHB---CCCHHHHHH---HHHHHHHHHHTTHHH
T ss_pred c---------ccccHHHHHHHHHhhccC---CCchHHHHH---HHHHHHHHhHHHHHH
Confidence 2 235799999987654432 589999999 555999999999974
No 26
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.96 E-value=1.2e-28 Score=213.71 Aligned_cols=251 Identities=11% Similarity=0.087 Sum_probs=178.9
Q ss_pred CCCCCCCCCCCcccccccccC-----cchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCc-
Q 019805 44 NYLPPPGPKPWPLIGNLNLLG-----EHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPE- 116 (335)
Q Consensus 44 ~~~~ppgp~~~p~~g~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~- 116 (335)
+.+.||| ++|++.... .+++..+.++++ ||||++++. |+.+.|++++++++++++.+. +.|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 4567777 788765542 467888888876 799999998 678999999999999999765 36777654
Q ss_pred hhhh---c---c---cc---cCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 019805 117 ILAG---K---H---AN---YDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYST 184 (335)
Q Consensus 117 ~~~~---~---~---~~---~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 184 (335)
.... . . .+ ..+.++++.+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|.+ .++
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~ 149 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD-----FDG 149 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT-----SSS
T ss_pred ccCCcccccchhccccccccccccccccCC-hHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH-----hCC
Confidence 2211 1 1 21 1135677776 999999999999 9999999999999999999999999976 335
Q ss_pred ccchHHH-HHHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHH
Q 019805 185 PVHLKEC-VFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARK 263 (335)
Q Consensus 185 ~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 263 (335)
++|+.+. ...+++|+|+.+ ||.+.+.. ..+.+........... ....+|++.++. +...++..++.+
T Consensus 150 ~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~P~l~~~~-~~~~~~~~~~~~ 217 (428)
T 1cpt_A 150 ECDFMTDCALYYPLHVVMTA-LGVPEDDE--------PLMLKLTQDFFGVHEP--DEQAVAAPRQSA-DEAARRFHETIA 217 (428)
T ss_dssp EEEHHHHTTTTHHHHHHHHH-HTCCGGGH--------HHHHHHHHTTTCC-------------------CHHHHHHHHHH
T ss_pred CeehHHHHHhhhHHHHHHHH-cCCCHhHH--------HHHHHHHHHHHhcccc--cccccccccccc-hhhHHHHHHHHH
Confidence 7999855 467999999999 99876532 3444443332221111 112345544331 133456778888
Q ss_pred HHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 264 KIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 264 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.+.+++.++|+++++.. ..|+++.|++...+ +..++++|+.+ ++.++++||+|||++
T Consensus 218 ~~~~~~~~~i~~r~~~~--------~~dll~~ll~~~~~---~~~ls~~ei~~---~~~~l~~AG~eTta~ 274 (428)
T 1cpt_A 218 TFYDYFNGFTVDRRSCP--------KDDVMSLLANSKLD---GNYIDDKYINA---YYVAIATAGHDTTSS 274 (428)
T ss_dssp HHHHHHHHHHHHHTTSC--------CSSHHHHHHHCBSS---SSBCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--------CCcHHHHHHhcccc---CCCCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 99999999999887632 46999999987653 23699999999 566999999999974
No 27
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.96 E-value=9.4e-28 Score=207.07 Aligned_cols=238 Identities=13% Similarity=0.161 Sum_probs=178.4
Q ss_pred CCCCCCCCCCcccccccccCcchhHHHHHHHHhh-CCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcc
Q 019805 45 YLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKY-GPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKH 122 (335)
Q Consensus 45 ~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (335)
...||+|+++|.+.....+..+++..+.++ ++| ||||++++ |+.+.|+|++|+++++|+.++. +.+++.......
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~ 80 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPA 80 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccc
Confidence 346778888886644444567889999999 788 99999997 8899999999999999998654 444432111111
Q ss_pred c-------ccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHH-
Q 019805 123 A-------NYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFM- 194 (335)
Q Consensus 123 ~-------~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~- 194 (335)
. ...+.++++.+ |+.|+++||+++ +.|+.++++.+.+.+.++++++++.|.+ .|+++|+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~g~~~d~~~~~~~~ 153 (412)
T 2zbx_A 81 TSPRFEAVRESPQAFIGLD-PPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA-----AGPTADLVSQFALP 153 (412)
T ss_dssp CSGGGC----CCCCGGGCC-TTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH-----HCSCEEHHHHTTTH
T ss_pred cccccccccccccccccCC-cHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHH
Confidence 1 00234677665 999999999999 9999999999999999999999999985 4568999998874
Q ss_pred HHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Q 019805 195 FNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLD 274 (335)
Q Consensus 195 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 274 (335)
+++++++. +||.+.+.. +.+.+.+..+... + .+ ++..++.+.+.+++.++|+
T Consensus 154 ~~~~vi~~-~~G~~~~~~--------~~~~~~~~~~~~~----------~-------~~--~~~~~~~~~~~~~~~~~i~ 205 (412)
T 2zbx_A 154 VPSMVICR-LLGVPYADH--------EFFQDASKRLVQS----------T-------DA--QSALTARNDLAGYLDGLIT 205 (412)
T ss_dssp HHHHHHHH-HHTCCGGGH--------HHHHHHHHHHHHC----------S-------SH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCCHHHH--------HHHHHHHHHHhcc----------C-------cH--HHHHHHHHHHHHHHHHHHH
Confidence 99999997 699875421 3455554443321 0 11 4566788889999999999
Q ss_pred HHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 275 EHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 275 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++++.. ..|+++.|++..+++ ..++++++.+ ++.++++||+|||++
T Consensus 206 ~r~~~~--------~~d~l~~ll~~~~~~---~~ls~~ei~~---~~~~~~~AG~dTt~~ 251 (412)
T 2zbx_A 206 QFQTEP--------GAGLVGALVADQLAN---GEIDREELIS---TAMLLLIAGHETTAS 251 (412)
T ss_dssp HHHHSC--------CSSHHHHHHHTTTTT---TSSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhCC--------CCCHHHHHHHhcccC---CCCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 988743 469999999876532 3699999999 566999999999974
No 28
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.96 E-value=2.2e-28 Score=210.55 Aligned_cols=233 Identities=14% Similarity=0.150 Sum_probs=176.0
Q ss_pred CCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEe----c-CC-eeEEEeCCHHHHHHHH-HhcCCccCCCCc
Q 019805 44 NYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLK----L-GL-NIMVVCSSAEVAELFL-KTHDLTFATRPE 116 (335)
Q Consensus 44 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~----~-~~-~~~v~i~~p~~~~~i~-~~~~~~~~~~~~ 116 (335)
..+.||||+++|+. +..+++.++.++ ++|||||+++ + ++ .++|+++||+++++|+ .++. |.+++.
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~~ 79 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRPQ 79 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCCC
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--cccccc
Confidence 35678999999886 456889999999 9999999999 6 78 8999999999999999 5443 555443
Q ss_pred hhhhc-ccc---cCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH
Q 019805 117 ILAGK-HAN---YDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV 192 (335)
Q Consensus 117 ~~~~~-~~~---~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~ 192 (335)
..... .+. ..+.++++.+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|.. .|+++|+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~g~~~d~~~~~ 152 (406)
T 1ued_A 80 FTQSKSGAHVEAQFVGQISTYD-PPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA-----EGPSADLQGLF 152 (406)
T ss_dssp C---------CGGGTTCGGGCC-TTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-----HCTTEEHHHHT
T ss_pred ccccccccccccccccccccCC-CHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCeeHHHHH
Confidence 11110 011 0234677765 999999999999 9999999999999999999999999985 45789999988
Q ss_pred HH-HHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHH
Q 019805 193 FM-FNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEH 271 (335)
Q Consensus 193 ~~-~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (335)
.. +++++++. +||.+.+. .+.+.+.+..+.. . . ...++..++.+.+.+++.+
T Consensus 153 ~~~~~~~vi~~-~~G~~~~~--------~~~~~~~~~~~~~----~----~----------~~~~~~~~~~~~~~~~~~~ 205 (406)
T 1ued_A 153 ADPVGAHALCE-LLGIPRDD--------QREFVRRIRRNAD----L----S----------RGLKARAADSAAFNRYLDN 205 (406)
T ss_dssp HHHHHHHHHHH-HHTCCHHH--------HHHHHHHHHHCC---------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHH-HcCCCHHH--------HHHHHHHHHHHHh----c----c----------CCHHHHHHHHHHHHHHHHH
Confidence 75 99999995 69987431 1234443333211 0 0 0124566788899999999
Q ss_pred HHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 272 VLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 272 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+|+++++.. ..|+++.|++.. + ..++++++.+ ++.++++||+|||++
T Consensus 206 ~i~~r~~~~--------~~d~l~~ll~~~-~----~~ls~~ei~~---~~~~l~~AG~dTt~~ 252 (406)
T 1ued_A 206 LLARQRADP--------DDGLLGMIVRDH-G----DNVTDEELKG---LCTALILGGVETVAG 252 (406)
T ss_dssp HHHHHHHSC--------CSSHHHHHHHHH-G----GGSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC--------CCCHHHHHHHhc-C----CCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 999988743 469999999865 1 2599999999 566999999999974
No 29
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.96 E-value=3.3e-27 Score=204.26 Aligned_cols=239 Identities=15% Similarity=0.119 Sum_probs=177.2
Q ss_pred CcccccccccCcchhHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh--hhcccccCCccc
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYG-PLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL--AGKHANYDYLVM 130 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 130 (335)
.|++|++..+..+++.++.+++++|| |||++++++.+.|++++|++++.++ +. ..|.+++..+ ....+. +..++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~-g~~~l 84 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSLF-GVNAI 84 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTTT-CTTCG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhhc-cccce
Confidence 48999999887789999999999998 9999999889999999999998654 33 2355433221 111121 23467
Q ss_pred cccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHhccccc
Q 019805 131 PGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYT 210 (335)
Q Consensus 131 ~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 210 (335)
+..+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.+ ++++|+.+.+..+++++++.+ ||.+.+
T Consensus 85 ~~~d-g~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~------~~~~dl~~~~~~~~~~vi~~~-~G~~~~ 155 (417)
T 1izo_A 85 QGMD-GSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK------ADEVVLFEEAKEILCRVACYW-AGVPLK 155 (417)
T ss_dssp GGCC-HHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT------SSEEEHHHHHHHHHHHHHHHH-HTCCCC
T ss_pred eecC-ChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc------CCCeeHHHHHHHHHHHHHHHH-cCCCCC
Confidence 7666 999999999999 9999999999999999999999999853 468999999999999999998 698866
Q ss_pred CCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCC
Q 019805 211 EENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTN 290 (335)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 290 (335)
.. ...++.+.+......... . .+..++..++.+.+.+++.++|+++++... .....
T Consensus 156 ~~------~~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~~~ 211 (417)
T 1izo_A 156 ET------EVKERADDFIDMVDAFGA-----V---------GPRHWKGRRARPRAEEWIEVMIEDARAGLL----KTTSG 211 (417)
T ss_dssp TT------THHHHHHHHHHHHHHTTC-----C---------SHHHHHHHHHHHHHHHHHHHHHHHHHTTSS----CCCTT
T ss_pred ch------HHHHHHHHHHHHHhhccc-----C---------CccchhHHHHHHHHHHHHHHHHHHHHhhcc----CCCcC
Confidence 42 234444444443332110 0 112245667888999999999999987542 23457
Q ss_pred cHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 291 DMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 291 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|+++.|++..++++ ..++++++.+. +.. ++||+|||++
T Consensus 212 d~l~~ll~~~~~~g--~~l~~~~~~~~---~~~-~~ag~~tt~~ 249 (417)
T 1izo_A 212 TALHEMAFHTQEDG--SQLDSRMAAIE---LIN-VLRPIVAISY 249 (417)
T ss_dssp SHHHHHHHCBCTTS--CBCCHHHHHHH---HHH-HHHHHHTHHH
T ss_pred CHHHHHHHhccccC--CCCCHHHHHHH---HHH-HHhhhhHHHH
Confidence 99999998755432 46888888773 334 4599999863
No 30
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.95 E-value=6.8e-27 Score=202.19 Aligned_cols=242 Identities=11% Similarity=0.065 Sum_probs=176.4
Q ss_pred CCCCCCCcccccccccCcchhHHHHHHHHhh-CCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh--hhcccc
Q 019805 48 PPGPKPWPLIGNLNLLGEHLHLSFHSLSQKY-GPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL--AGKHAN 124 (335)
Q Consensus 48 ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--~~~~~~ 124 (335)
|||| |++|++..+..+++.++.+++++| ||||++++++.+.+++++|++++ ++.+.. .|.+++... ....+.
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~~-~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDTT-RFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCTT-TEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhccc-ccccccccchhhhhhcc
Confidence 6776 899999988778999999999999 79999998888999999999986 665543 465543221 111121
Q ss_pred cCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHH
Q 019805 125 YDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRML 204 (335)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~ 204 (335)
+..+++..+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.+ ++++|+.+.+..+++++++.+
T Consensus 79 -g~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~------~~~vdl~~~~~~~~~~vi~~~- 148 (415)
T 3awm_A 79 -GQGGVQGLD-GETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR------KGEIVFYDELHEPLTRAVCAW- 148 (415)
T ss_dssp -CSSSGGGCC-HHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH------HSEEEHHHHHHHHHHHHHHHH-
T ss_pred -CCcceeecC-cHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc------CCcEeHHHHHHHHHHHHHHHH-
Confidence 235676666 999999999999 9999999999999999999999999975 257999999999999999999
Q ss_pred hcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Q 019805 205 FGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKF 284 (335)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 284 (335)
||.+.+.. +..++.+.+........ ++ .+..++..++.+++.+++.++|+++++...
T Consensus 149 ~G~~~~~~------~~~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--- 205 (415)
T 3awm_A 149 AGVPLPDD------EAGNRAGELRALFDAAG---------SA-----SPRHLWSRLARRRVDAWAKRIIEGIRAGSI--- 205 (415)
T ss_dssp HTCCCCGG------GHHHHHHHHHHHHHSTT---------CS-----SHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---
T ss_pred cCCCCCcc------hHHHHHHHHHHHHHHhc---------cc-----CchHHHHHHHHHHHHHHHHHHHHHHHHhhh---
Confidence 89876542 22334333333332111 00 122345677888999999999999987642
Q ss_pred cCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 285 KERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 285 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
....+|+++.|++..++++ ..++++++.+. +..+ +||+|||++
T Consensus 206 -~~~~~d~l~~ll~~~~~~g--~~~~~~~~~~~---~~~~-~ag~~tt~~ 248 (415)
T 3awm_A 206 -GSGSGTAAYAIAWHRDRHD--DLLSPHVAAVE---LVNV-LRPTVAIAV 248 (415)
T ss_dssp -CCCTTSHHHHHHHCBCTTS--CBCCHHHHHHH---HHHH-HHHHHTHHH
T ss_pred -cCCCCCHHHHHHhhhhccC--CCCCHHHHHHH---HHHH-HHhhhhHHH
Confidence 2345799999998755432 36888888874 3354 599999863
No 31
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.95 E-value=4.9e-27 Score=202.62 Aligned_cols=237 Identities=12% Similarity=0.125 Sum_probs=172.0
Q ss_pred hhccCCCCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCch
Q 019805 38 FSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEI 117 (335)
Q Consensus 38 ~~~~~~~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~ 117 (335)
++++.++.+.+|||+. ..+++.++.++++ |||| +.++.+.+++++|+++++++.+.. .|++++..
T Consensus 11 yr~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~-~f~~~~~~ 75 (411)
T 2jjn_A 11 ARRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTA-TFSSDPTR 75 (411)
T ss_dssp ------CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTT-TEESCGGG
T ss_pred hhcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCcc-cccCcccc
Confidence 4566788889999872 2477888999976 9998 456678999999999999998654 67776543
Q ss_pred hhhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHH
Q 019805 118 LAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFN 196 (335)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~ 196 (335)
.. ......+.++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++. . + +++|+.+. ...++
T Consensus 76 ~~-~~~~~~~~~~~~~~-g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~--~-----~-~~~d~~~~~~~~~~ 144 (411)
T 2jjn_A 76 VI-EGASPTPGMIHEID-PPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD--A-----G-ESFDLVDVLAFPLP 144 (411)
T ss_dssp GS-TTCCCCTTCGGGCC-TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT--S-----C-SEEEHHHHTTTHHH
T ss_pred cC-CcccccccccccCC-chHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc--C-----C-CceeHHHHHHHHHH
Confidence 21 11112345677776 999999999999 9999999999999999999999988 2 3 47999955 56899
Q ss_pred HHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 197 LAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEH 276 (335)
Q Consensus 197 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 276 (335)
+|+++.+ ||.+.+..+ . +.+....+.... .|. ++ .+...++..++.+.+.+++.++|+++
T Consensus 145 ~~vi~~~-fG~~~~~~~-----~---~~~~~~~~~~~~--------~~~--~~-~p~~~~~~~~~~~~~~~~~~~~i~~r 204 (411)
T 2jjn_A 145 VTIVAEL-LGLPPMDHE-----Q---FGDWSGALVDIQ--------MDD--PT-DPALAERIADVLNPLTAYLKARCAER 204 (411)
T ss_dssp HHHHHHH-HTCCSCCCS-----T---TCCHHHHHHHSC--------CSC--TT-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-cCCCHHHHH-----H---HHHHHHHHHhcc--------Ccc--cc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999875432 2 222333333221 111 00 02334567788889999999999998
Q ss_pred HHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 277 ERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 277 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++.. ..|+++.|++...+ +..++++|+.+ ++.++++||+|||++
T Consensus 205 ~~~~--------~~d~l~~ll~~~~~---~~~l~~~el~~---~~~~~~~AG~eTt~~ 248 (411)
T 2jjn_A 205 RADP--------GDDLISRLVLAEVD---GRALDDEEAAN---FSTALLLAGHITTTV 248 (411)
T ss_dssp HHSC--------CSSHHHHHHHCCBT---TBCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HhCC--------CCCHHHHHHhcccC---CCCCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 7732 47999999987543 23699999999 566999999999974
No 32
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.95 E-value=2.6e-26 Score=197.46 Aligned_cols=222 Identities=11% Similarity=0.118 Sum_probs=169.2
Q ss_pred ccCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCc--h-hhhcccc--cCCccccccCC
Q 019805 62 LLGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPE--I-LAGKHAN--YDYLVMPGAPY 135 (335)
Q Consensus 62 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~--~-~~~~~~~--~~~~~~~~~~~ 135 (335)
.+..+++.++.++ ++||||+++++ |+.+.|++++|+++++|+.++. |.+++. . ....... ..+.++++.+
T Consensus 16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 91 (403)
T 3aba_A 16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDSS--FSVQVPHALHTQDGVVTQKPGRGSLLWQD- 91 (403)
T ss_dssp SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCTT--EESCCSCCTTSSSCCCCCCCCTTCCTTCC-
T ss_pred ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCCC--cccccccccccccccccccccccccccCC-
Confidence 3456788899999 89999999997 8899999999999999998753 666532 1 1111111 1346777766
Q ss_pred ChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCc
Q 019805 136 GPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENE 214 (335)
Q Consensus 136 g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~ 214 (335)
|+.|+++||+++ ++|++++++.+.+.+.++++++++.|.+ .++++|+...+ ..+++++++. +||.+.+..
T Consensus 92 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-- 162 (403)
T 3aba_A 92 EPEHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA-----RGGPVDLVKTFANAVPSMVISD-LFGVPVERR-- 162 (403)
T ss_dssp TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH-----HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH--
T ss_pred chhHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH--
Confidence 999999999999 9999999999999999999999999985 24679998766 4799999998 699875422
Q ss_pred CCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHH
Q 019805 215 NNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVD 294 (335)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~ 294 (335)
+.+......+... . . ++ ++..++.+.+.+++.++|+++++.. .+|+++
T Consensus 163 ------~~~~~~~~~~~~~---~-----~--------~p--~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~ 210 (403)
T 3aba_A 163 ------AEFQDIAEAMMRV---D-----Q--------DA--AATEAAGMRLGGLLYQLVQERRANP--------GDDLIS 210 (403)
T ss_dssp ------HHHHHHHHHHSBS---S-----S--------CH--HHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHH
T ss_pred ------HHHHHHHHHHHhc---c-----C--------cH--HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHH
Confidence 3444443332211 0 0 11 4566788889999999999988743 469999
Q ss_pred HHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 295 VLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 295 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.|++..++ +..++++|+.+ ++.++++||+|||++
T Consensus 211 ~ll~~~~~---~~~l~~~ei~~---~~~~l~~AG~dTt~~ 244 (403)
T 3aba_A 211 ALITTEDP---DGVVDDMFLMN---AAGTLLIAAHDTTAC 244 (403)
T ss_dssp HHHTSCCT---TCCCSHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhhccC---CCCCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 99987543 23699999999 566999999999974
No 33
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.95 E-value=5.7e-27 Score=204.30 Aligned_cols=232 Identities=13% Similarity=0.073 Sum_probs=170.4
Q ss_pred hhHHHHHHHHhhCCce--EEe-cCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccc-------------cCCccc
Q 019805 67 LHLSFHSLSQKYGPLM--QLK-LGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHAN-------------YDYLVM 130 (335)
Q Consensus 67 ~~~~~~~~~~~yG~i~--~~~-~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 130 (335)
++..+.++ ++||||+ +++ +|+.+.++|++++++++++.+. ..|++++......... ..++++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 88888888 6789999 888 6778999999999999999776 4677765432211100 122467
Q ss_pred cccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccc
Q 019805 131 PGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRY 209 (335)
Q Consensus 131 ~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~ 209 (335)
+..+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|.+ .++++|+...+ ..++++||+.+ ||.+.
T Consensus 125 ~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~~dl~~~~~~~~~~~vi~~l-~G~~~ 196 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLG-----AGEEGDFMALVAAPYPLHVVMQI-LGVPP 196 (450)
T ss_dssp GGCC-TTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHH-----TCSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred ccCC-CHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCEeeHHHHHHHHHHHHHHHH-cCCCh
Confidence 7666 999999999999 9999999999999999999999999986 46789998888 69999999996 99764
Q ss_pred cCCCcCCCCChHHHHHHHHHHHHhhccccccccccccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCC
Q 019805 210 TEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFL-DLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERG 288 (335)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 288 (335)
+. ...+.+....+..... ....++..++ +.....++..++.+++.+++.++|+++++..
T Consensus 197 ~~--------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------- 256 (450)
T 3tkt_A 197 ED--------EPKMLFLTQQMFGGQD----EDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP-------- 256 (450)
T ss_dssp GG--------HHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC--------
T ss_pred hH--------HHHHHHHHHHHhcccc----chhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC--------
Confidence 32 2345444444322111 1122332222 1133456778888999999999999988743
Q ss_pred CCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 289 TNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 289 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.+|+++.|++...++ ..++++|+.+ +++.+++||+|||++
T Consensus 257 ~~dll~~ll~~~~~~---~~ls~~ei~~---~~~~l~~AG~dTTa~ 296 (450)
T 3tkt_A 257 TDDVATVIANAVVDG---EPMSDRDTAG---YYIITASAGHDTTSA 296 (450)
T ss_dssp CSSHHHHHHTCEETT---EECCHHHHHH---HHHHHHHHHSHHHHH
T ss_pred CCCHHHHHHhccccC---CCCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 569999999876532 3699999999 555999999999974
No 34
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.94 E-value=1.8e-26 Score=197.52 Aligned_cols=219 Identities=11% Similarity=0.092 Sum_probs=169.5
Q ss_pred CcchhHHHHHHHHhhCCceEEecCC----eeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhH
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGL----NIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHL 139 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~----~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 139 (335)
..+++.++.++ ++||||+++++++ .++|+|+||+++++|+.+ ...|.+++...........+.+++..+ |+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILAD-HERFSSMRPVDDEADRALLPGILQAYD-PPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHC-TTTEECSCCCC-----CCCTTCGGGCC-TTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhC-chhccCCccccccccccccccccccCC-ChhH
Confidence 57899999999 5999999999876 899999999999999954 456877765432222122334555555 9999
Q ss_pred HHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHhcccccCCCcCCCCC
Q 019805 140 RQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVT 219 (335)
Q Consensus 140 ~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~ 219 (335)
+++|++++ ++|++++++.+.+.+.++++++++.|.+ .|+++|+.+.+...+.++++..+||.+.+..
T Consensus 88 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~------- 154 (384)
T 3oo3_A 88 TRLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES-----VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ------- 154 (384)
T ss_dssp HHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-----SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-------
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-------
Confidence 99999999 9999999999999999999999999976 5678999999998887777777899876432
Q ss_pred hHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhc
Q 019805 220 PKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQL 299 (335)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~ 299 (335)
..+.+.+..... . ...++..++.+.+.+++.++|+++++.. .+|+++.|++.
T Consensus 155 -~~~~~~~~~~~~---~----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~d~l~~ll~~ 206 (384)
T 3oo3_A 155 -AELSRMIRESRE---S----------------RLPRQRTLSGLGIVNYTKRLTSGKRRDP--------GDGMIGVIVRE 206 (384)
T ss_dssp -HHHHHHHHHHHH---C----------------SCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHHH
T ss_pred -HHHHHHHHHHhc---c----------------CChHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHHh
Confidence 355555555433 0 1234666788899999999999887643 46999999986
Q ss_pred cCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 300 ADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 300 ~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
. +..++++++.+ ++.++++||+|||++
T Consensus 207 ~-----~~~l~~~~l~~---~~~~~~~AG~~Tta~ 233 (384)
T 3oo3_A 207 H-----GAEISDEELAG---LAEGNLIMAAEQMAA 233 (384)
T ss_dssp H-----GGGSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred c-----CCCCCHHHHHH---HHHHHHHhhHHHHHH
Confidence 2 13699999999 555999999999974
No 35
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.94 E-value=5.5e-26 Score=196.41 Aligned_cols=221 Identities=10% Similarity=0.075 Sum_probs=172.6
Q ss_pred cCcchhHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccc-------cCCccccccC
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKLG-LNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHAN-------YDYLVMPGAP 134 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 134 (335)
+..+++.++.+++++ |||++++++ |.+.|+|++|+++++++.++ .|++++......... ..+.++++.+
T Consensus 27 ~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 103 (417)
T 3tyw_A 27 CPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD 103 (417)
T ss_dssp STTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC
T ss_pred cccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC
Confidence 457899999999998 999999986 58999999999999999876 466643221111111 1346777776
Q ss_pred CChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCC
Q 019805 135 YGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEEN 213 (335)
Q Consensus 135 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 213 (335)
|+.|+++|++++ ++|++++++.+.+.+.++++++++.+.+ .|+++|+.+.+ ..+++++++.+ ||.+.+..+
T Consensus 104 -g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~ 175 (417)
T 3tyw_A 104 -APEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA-----AGGPVDLVSAYANAVSTSVICEL-LGIPRHDLE 175 (417)
T ss_dssp -HHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH-----HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTT
T ss_pred -CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-----hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHHH
Confidence 999999999999 9999999999999999999999999987 45789999988 58999999997 998876432
Q ss_pred cCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHH
Q 019805 214 ENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMV 293 (335)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l 293 (335)
.+......+.... + ..++..++.+.+.+++.++|+++++.. ..|++
T Consensus 176 --------~~~~~~~~~~~~~---------~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~d~l 221 (417)
T 3tyw_A 176 --------FFRDVTRISGSRN---------S---------TAEQVSEALGGLFGLLGGLVAERREEP--------RDDLI 221 (417)
T ss_dssp --------HHHHHHHHHHSSS---------S---------CTTHHHHHHHHHHHHHHHHHHHHHSSC--------CSSHH
T ss_pred --------HHHHHHHHHhccc---------C---------CHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCCHH
Confidence 4444444332210 1 113566788889999999999887643 57999
Q ss_pred HHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 294 DVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 294 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.|++...+++ .++++++.+ ++..+++||+|||++
T Consensus 222 ~~ll~~~~~~~---~ls~~el~~---~~~~l~~AG~eTta~ 256 (417)
T 3tyw_A 222 SKLVTDHLVPG---NVTTEQLLS---TLGITINAGRETTTS 256 (417)
T ss_dssp HHHHHHTTTTT---SSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCC---CCCHHHHHH---HHHHHHhhhHHHHHH
Confidence 99998866543 699999999 555999999999974
No 36
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.94 E-value=7.6e-27 Score=201.23 Aligned_cols=222 Identities=10% Similarity=0.076 Sum_probs=165.2
Q ss_pred cccCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcc---ccc----CCccccc
Q 019805 61 NLLGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKH---ANY----DYLVMPG 132 (335)
Q Consensus 61 ~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 132 (335)
..+..+++..+.++ ++||||+++++ |+.+.|+++||+++++|+.++. |.+++....... +.. .+.++++
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccccc
Confidence 34467889999999 89999999997 8889999999999999998654 444432111110 110 1246766
Q ss_pred cCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHH-HHHHHHHHHHHhcccccC
Q 019805 133 APYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVF-MFNLAIMSRMLFGKRYTE 211 (335)
Q Consensus 133 ~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~ 211 (335)
.+ |+.|+++|++++ +.|+.++++.+.+.+.++++++++.|.. .|+++|+.+.+. .+++++++. +||.+.+.
T Consensus 97 ~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 168 (408)
T 3abb_A 97 VD-DPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA-----KGPGADLVSAFALPVPSVAICE-LLGVPYGD 168 (408)
T ss_dssp CC-TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-----TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred CC-chHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH
Confidence 65 999999999999 9999999999999999999999999985 467899999886 499999997 69987542
Q ss_pred CCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCc
Q 019805 212 ENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTND 291 (335)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 291 (335)
. +.+...+..+... . .+ ++..++.+.+.+++.++|+++++.. .+|
T Consensus 169 ~--------~~~~~~~~~~~~~---~-----~~-----------~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d 213 (408)
T 3abb_A 169 H--------DFFEECSRNFVGA---A-----TS-----------AEADAAFGELYTYLHGLVGRKQAEP--------EDG 213 (408)
T ss_dssp H--------HHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC--------CSS
T ss_pred H--------HHHHHHHHHHhcc---c-----ch-----------HHHHHHHHHHHHHHHHHHHHHHhCC--------CCC
Confidence 2 3444444332210 0 01 2233466778889999999887743 369
Q ss_pred HHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 292 MVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 292 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.|++..+++ ..++++|+.+ ++.++++||+|||++
T Consensus 214 ~l~~ll~~~~~~---~~ls~~ei~~---~~~~l~~AG~dTt~~ 250 (408)
T 3abb_A 214 LLDELIARQLEE---GDLDHDEVVM---IALVLLVAGHETTVN 250 (408)
T ss_dssp HHHHHHHHHHTS---SSCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCC---CCCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 999999875432 3699999999 566999999999974
No 37
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.94 E-value=6.5e-27 Score=203.05 Aligned_cols=242 Identities=15% Similarity=0.126 Sum_probs=170.9
Q ss_pred CCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEe--------cCCeeEEEeCCHHHHHHHHHhcCCccCCCCc
Q 019805 45 YLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLK--------LGLNIMVVCSSAEVAELFLKTHDLTFATRPE 116 (335)
Q Consensus 45 ~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~--------~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~ 116 (335)
...||+|..++++........+++.++.++ ++||||+++. +|+.++++|++++++++|+.+. ..|++++.
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~ 94 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYEN 94 (433)
T ss_dssp ---CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTT
T ss_pred cCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcc
Confidence 345667766776655443356789999999 7899999998 4557999999999999999765 45776654
Q ss_pred hhhhc--------ccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccch
Q 019805 117 ILAGK--------HANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHL 188 (335)
Q Consensus 117 ~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~ 188 (335)
..... .....+.+++..+ |+.|+++|++++ ++|+++.++.+.+.+.++++++++.|... +++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~------~~~d~ 166 (433)
T 3ivy_A 95 GVIPRFKNDIAREDIEVQRFVMLNMD-APHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAAA------GSGDF 166 (433)
T ss_dssp CSCCCCCTTCCHHHHHGGGGSGGGCC-TTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHHH------CEEEH
T ss_pred cccccccccccccccccccCCccccC-hHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhhC------CCeeH
Confidence 32221 1112346777776 999999999998 99999999999999999999999999752 56899
Q ss_pred HHHH-HHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHH
Q 019805 189 KECV-FMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDK 267 (335)
Q Consensus 189 ~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 267 (335)
...+ ..+++++++.+ ||.+... ...+.+.... +.. ...|.+.. .+..++.+.+.+
T Consensus 167 ~~~~~~~~~~~vi~~l-~G~~~~~--------~~~~~~~~~~----~~~----~~~p~~~~-------~~~~~~~~~~~~ 222 (433)
T 3ivy_A 167 VEQVSCELPLQAIAGL-LGVPQED--------RGKLFHWSNE----MTG----NEDPEYAH-------IDPKASSAELIG 222 (433)
T ss_dssp HHHTTSHHHHHHHHHH-HTCCHHH--------HHHHHHHHTT----CSC----CCCGGGTT-------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHH--------HHHHHHHHHH----Hhc----cCCchhhh-------HHHHHHHHHHHH
Confidence 8888 99999999996 8964321 1233322211 111 12232211 144567788999
Q ss_pred HHHHHHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 268 FYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 268 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++.++|+++++.. .+|+++.|++...++ ..++++|+.+ ++..+++||+|||++
T Consensus 223 ~~~~~i~~r~~~~--------~~dll~~ll~~~~~~---~~ls~~ei~~---~~~~ll~AG~dTTa~ 275 (433)
T 3ivy_A 223 YAMKMAEEKAKNP--------ADDIVTQLIQADIDG---EKLSDDEFGF---FVVMLAVAGNETTRN 275 (433)
T ss_dssp HHHHHHHHC---------------CHHHHHSCC--C---CCCCHHHHHH---HHHHHHHHSSHHHHH
T ss_pred HHHHHHHHHhcCC--------CCcHHHHHHhhhcCC---CCCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 9999998887643 569999999876543 3699999999 555999999999974
No 38
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.94 E-value=1.6e-26 Score=199.36 Aligned_cols=239 Identities=11% Similarity=0.102 Sum_probs=176.8
Q ss_pred cCCCCCCCCCCCCCccc--ccccc-----cCcchhHHHHHHHHhhC--CceEEecCCeeEEEeCCHHHHHHHHHhcCCcc
Q 019805 41 NKLNYLPPPGPKPWPLI--GNLNL-----LGEHLHLSFHSLSQKYG--PLMQLKLGLNIMVVCSSAEVAELFLKTHDLTF 111 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~--g~~~~-----~~~~~~~~~~~~~~~yG--~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~ 111 (335)
...+.+.||||++.|.. +.+-. +..+++.++.+++ +|| |||+++..+ +.|++++++++++|+.+. +.|
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f 82 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHF 82 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTE
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-ccc
Confidence 35567889999998864 43222 2457888898985 799 999998333 689999999999999754 467
Q ss_pred CCCC-chhhhcccccCCcc-ccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchH
Q 019805 112 ATRP-EILAGKHANYDYLV-MPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLK 189 (335)
Q Consensus 112 ~~~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~ 189 (335)
.+++ ....... ..+.+ +++.+ |+.|+++|+++. ++|++.+++.+.+.+.++++++++.|.+ + +++|+.
T Consensus 83 ~~~~~~~~~~~~--~~~~~~l~~~~-g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~-~~~d~~ 152 (415)
T 2zwu_A 83 SSECPFIPREAG--EAYDFIPTSMD-PPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRP-----Q-GQCNFT 152 (415)
T ss_dssp ETTSCSSSHHHH--HHCCCTTTTCC-TTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGG-----G-TEEEHH
T ss_pred CCCcccCCCCcc--ccccccCccCC-CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCccHH
Confidence 7765 2221111 11355 77776 999999999999 9999999999999999999999999975 3 379999
Q ss_pred HHH-HHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHH
Q 019805 190 ECV-FMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKF 268 (335)
Q Consensus 190 ~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 268 (335)
+.+ ..+++++++.+ ||.+.+.. +.+.+....+... ..|. +..++.+.+.++
T Consensus 153 ~~~~~~~~~~vi~~~-~G~~~~~~--------~~~~~~~~~~~~~--------~~P~-----------~~~~~~~~~~~~ 204 (415)
T 2zwu_A 153 EDYAEPFPIRIFMLL-AGLPEEDI--------PHLKYLTDQMTRP--------DGSM-----------TFAEAKEALYDY 204 (415)
T ss_dssp HHTTTHHHHHHHHHH-HTCCGGGH--------HHHHHHHHHHHSC--------CSSS-----------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHH--------HHHHHHHHHHHhc--------cCHH-----------HHHHHHHHHHHH
Confidence 865 78999999999 99986532 3555554444321 0121 345677788999
Q ss_pred HHHHHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 269 YEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 269 ~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.++|+++++.. ..|+++.|++...+ +..++++++.+ ++.++++||+|||++
T Consensus 205 ~~~~i~~r~~~~--------~~dll~~ll~~~~~---~~~l~~~~i~~---~~~~l~~AG~dTta~ 256 (415)
T 2zwu_A 205 LIPIIEQRRQKP--------GTDAISIVANGQVN---GRPITSDEAKR---MCGLLLVGGLDTVVN 256 (415)
T ss_dssp HHHHHHHHHHSC--------CSSHHHHHHTCEET---TEECCHHHHHH---HHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhCC--------CCCHHHHHHHhhhc---CCCCCHHHHHH---HHHHHHHHhHhHHHH
Confidence 999999988742 47999999987543 23699999999 556999999999974
No 39
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.94 E-value=2e-26 Score=198.38 Aligned_cols=233 Identities=11% Similarity=0.166 Sum_probs=173.8
Q ss_pred CCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEec-CCee-EEEeCCHHHHHHHHHhcCCccCCCCchhhhc--
Q 019805 46 LPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKL-GLNI-MVVCSSAEVAELFLKTHDLTFATRPEILAGK-- 121 (335)
Q Consensus 46 ~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~-~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~-- 121 (335)
+.+|+|+.+|+.++ ...+++.++.+++ +||||+++++ ++.+ .|+|+||+++++|+.+. .|.+++......
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCccc
Confidence 56788887888766 3467889998885 7999999996 5666 99999999999999863 476664332111
Q ss_pred --c-cccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHH
Q 019805 122 --H-ANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNL 197 (335)
Q Consensus 122 --~-~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~ 197 (335)
. ....+.++++.+ |+.|+++||+++ +.|++++++.+.+.+.++++++++.|.+ .++++|+...+ ..+++
T Consensus 82 ~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~ 154 (406)
T 1s1f_A 82 LAPHFIPARGAVGFLD-PPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR-----AGPPADLTEAVLSPFPI 154 (406)
T ss_dssp SSSSCSSCTTSGGGCC-TTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH-----HCSSEEHHHHTTTHHHH
T ss_pred ccccccccccccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHhhHhHH
Confidence 1 211256787776 999999999999 9999999999999999999999999985 23589998766 47999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHE 277 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 277 (335)
++++. +||.+.+.. +.+......+..... | . ++..++.+.+.+++.++|++++
T Consensus 155 ~vi~~-~~G~~~~~~--------~~~~~~~~~~~~~~~--------~-------~---~~~~~~~~~~~~~~~~~i~~r~ 207 (406)
T 1s1f_A 155 AVICE-LMGVPATDR--------HSMHTWTQLILSSSH--------G-------A---EVSERAKNEMNAYFSDLIGLRS 207 (406)
T ss_dssp HHHHH-HHTCCGGGH--------HHHHHHHHHHHHHHT--------T-------C---CCCHHHHTHHHHHHHHHHHTSC
T ss_pred HHHHH-HhCCCHHHH--------HHHHHHHHHHHhccC--------C-------H---HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 599876532 345555444433211 1 0 1234566778888888887765
Q ss_pred HcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 278 RHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 278 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+. ...|+++.|++..++ ..++++|+.+ ++.++++|| |||++
T Consensus 208 ~~--------~~~d~l~~ll~~~~~----~~ls~~el~~---~~~~l~~AG-eTt~~ 248 (406)
T 1s1f_A 208 DS--------AGEDVTSLLGAAVGR----DEITLSEAVG---LAVLLQIGG-EAVTN 248 (406)
T ss_dssp CS--------CCCSHHHHHHHHHHT----TSSCHHHHHH---HHHHHHHHT-THHHH
T ss_pred hC--------CCCCHHHHHHHhhcc----cCCCHHHHHH---HHHHHHHhh-HHHHH
Confidence 42 246999999986533 2699999999 556999999 99974
No 40
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.94 E-value=2e-26 Score=198.55 Aligned_cols=227 Identities=16% Similarity=0.186 Sum_probs=169.3
Q ss_pred ccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCc--hhhh-cc-----cc--cCCcccc
Q 019805 62 LLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPE--ILAG-KH-----AN--YDYLVMP 131 (335)
Q Consensus 62 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~--~~~~-~~-----~~--~~~~~~~ 131 (335)
.+..+++..+.++ ++||||+++++++.+.|+++||+++++|+.++. +.+++. .... .. +. ..+.+++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 4467889999999 999999999988889999999999999998654 433321 1100 00 00 0234676
Q ss_pred ccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHH-HHHHHHHHHHHhccccc
Q 019805 132 GAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVF-MFNLAIMSRMLFGKRYT 210 (335)
Q Consensus 132 ~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~ 210 (335)
+.+ |+.|+++||+++ ++|++.+++.+.+.+.++++++++.|.+.. +++++|+.+.+. .+++|+++. +||.+.+
T Consensus 89 ~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 162 (408)
T 1odo_A 89 TAY-GPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAELP---AGEPVDLRQELAYPLPIAVIGH-LMGVPQD 162 (408)
T ss_dssp GCC-HHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHSC---TTSCEEHHHHTTTHHHHHHHHH-HHTCCHH
T ss_pred ccC-ChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCcchHHHHhhhhHHHHHHH-HhCCCHH
Confidence 666 999999999999 999999999999999999999999998642 367899999887 599999996 6998754
Q ss_pred CCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCC
Q 019805 211 EENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTN 290 (335)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 290 (335)
.. +.+.+.+..+... . . . .++..++.+.+.+++.++|+++++.. ..
T Consensus 163 ~~--------~~~~~~~~~~~~~---~-----~--------~--~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~ 208 (408)
T 1odo_A 163 RR--------DGFRALVDGVFDT---T-----L--------D--QAEAQANTARLYEVLDQLIAAKRATP--------GD 208 (408)
T ss_dssp HH--------HHHHHHHHHHHCT---T-----C--------C--HHHHHHHHHHHHHHHHHHHHHHHHSC--------CS
T ss_pred HH--------HHHHHHHHHHhcc---c-----C--------C--HHHHHHHHHHHHHHHHHHHHHHhhCC--------CC
Confidence 21 3444444443321 0 0 1 13566778889999999999987643 36
Q ss_pred cHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 291 DMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 291 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|+++.|++..++++.+..++++++.+ ++.++++||+|||++
T Consensus 209 d~l~~ll~~~~~~~~~~~l~~~ei~~---~~~~~~~AG~dTt~~ 249 (408)
T 1odo_A 209 DMTSLLIAARDDEGDGDRLSPEELRD---TLLLMISAGYETTVN 249 (408)
T ss_dssp SHHHHHHHHHCC-----CCCHHHHHH---HHHHHHHHHHTTHHH
T ss_pred CHHHHHHHhcccccccCCCCHHHHHH---HHHHHHHHhHHHHHH
Confidence 99999998765421123699999999 566999999999974
No 41
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.94 E-value=6.4e-26 Score=196.71 Aligned_cols=227 Identities=14% Similarity=0.135 Sum_probs=174.5
Q ss_pred cchhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHhcCCccCCCCch--h-hhcccccCCccccccC
Q 019805 65 EHLHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKTHDLTFATRPEI--L-AGKHANYDYLVMPGAP 134 (335)
Q Consensus 65 ~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 134 (335)
.+++.++.+++ +|||||+++++ +.++|+|+||+++++|+.++. .|++++.. . ....+...+.++++.+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~d 121 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPD-IFSSYPNITINDQTPELAEYFGSMIVLD 121 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTT-TEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcc-cccCccccccCccccchhhhccccccCC
Confidence 57888899996 68999999986 668999999999999998753 67776532 1 1111111246787776
Q ss_pred CChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCC
Q 019805 135 YGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEEN 213 (335)
Q Consensus 135 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 213 (335)
|+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+.. +++++|+.+.+ ..+++++++.+ ||.+.+..
T Consensus 122 -g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~---~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~- 194 (435)
T 2wm5_A 122 -DPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIANN---PDRQADLVSELAGPLPLQIICDM-MGIPKADH- 194 (435)
T ss_dssp -TTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGH-
T ss_pred -cHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcEehHHHHHHHHHHHHHHHH-cCCCHHHH-
Confidence 999999999999 999999999999999999999999998742 34589999766 78999999999 99987532
Q ss_pred cCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHH
Q 019805 214 ENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMV 293 (335)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l 293 (335)
+.+.+....+.... .|++. +..++..++.+.+.+++.++|+++++.. ..|++
T Consensus 195 -------~~~~~~~~~~~~~~--------~p~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll 246 (435)
T 2wm5_A 195 -------QRIFHWTNVILGFG--------DPDLA-----TDFDEFMQVSADIGAYATALAEDRRVNH--------HDDLT 246 (435)
T ss_dssp -------HHHHHHHHHHHHTT--------CTTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHH
T ss_pred -------HHHHHHHHHHhccC--------Ccchh-----hhHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCHH
Confidence 35555555544321 13221 1235677888899999999999988742 47999
Q ss_pred HHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 294 DVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 294 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.|++...+ +..++++++.+ ++.++++||+|||++
T Consensus 247 ~~ll~~~~~---~~~ls~~ei~~---~~~~l~~AG~dTt~~ 281 (435)
T 2wm5_A 247 SSLVEAEVD---GERLSSREIAS---FFILLVVAGNETTRN 281 (435)
T ss_dssp HHHHHCCBT---TBCCCHHHHHH---HHHHHHHHTTHHHHH
T ss_pred HHHHhhhcc---CCCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 999987543 23699999999 556999999999974
No 42
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.94 E-value=2e-27 Score=210.19 Aligned_cols=263 Identities=11% Similarity=0.087 Sum_probs=171.3
Q ss_pred cCCCCCCCCCCCC-CcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh-
Q 019805 41 NKLNYLPPPGPKP-WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL- 118 (335)
Q Consensus 41 ~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~- 118 (335)
+++..+.||||++ +|++||+..+..+++.++.+++++||+||++++|+.++|+|+||+++++|+.++.. +..++...
T Consensus 8 ~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~ 86 (491)
T 3dax_A 8 RRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFA 86 (491)
T ss_dssp CCCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHH
T ss_pred hccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHH
Confidence 3445578899988 89999999887788999999999999999999999999999999999999976542 22221111
Q ss_pred hhcccccCCcccc-ccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhc-CCCCCCccchHHHHHHHH
Q 019805 119 AGKHANYDYLVMP-GAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLS-SSSYSTPVHLKECVFMFN 196 (335)
Q Consensus 119 ~~~~~~~~~~~~~-~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~d~~~~~~~~~ 196 (335)
...... +.+++ ..+ |+.|+++|+.+. +.|+.++++.+.+.+.+++.++++...... +......+++...+..++
T Consensus 87 ~~~~~~--g~~~~~~~~-g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i 162 (491)
T 3dax_A 87 TSAKAF--GHRSIDPMD-GNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHH--TCCCCCGGG-TSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHH
T ss_pred HHHHHc--CCCcccccc-hhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHH
Confidence 111111 34555 555 899999999998 899999999998888888887776653221 000234688999999999
Q ss_pred HHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccc-cccccHHHHHHHHHHHHHHHHHHHHHH
Q 019805 197 LAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAF-LDLQGNVKRMKAARKKIDKFYEHVLDE 275 (335)
Q Consensus 197 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~ 275 (335)
+++++.++||.+....+ .....+......+.. +...+|++.+ ++. ...++..+..+.+.+.+ +++
T Consensus 163 ~~~~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~------~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~---~~~ 228 (491)
T 3dax_A 163 FEAGYLTIFGRDLTRRD----TQKAHILNNLDNFKQ------FDKVFPALVAGLPI-HMFRTAHNAREKLAESL---RHE 228 (491)
T ss_dssp HHHHHHHHHCBCSTTGG----GHHHHHHHHHHHHHH------HHHHHHHHHTTCCG-GGSHHHHHHHHHHHHHT---SHH
T ss_pred HHHhHHHHcCccccccc----chhhhhhHHHHHHHH------HHHHhHHHHHhCCH-hhhhHHHHHHHHHHHHH---HHH
Confidence 99999999998775432 111112222221111 1223454322 211 12233444444443332 233
Q ss_pred HHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 276 HERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 276 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.+.. ....|+++.+++..++++ .++++++.+ +++++++||+|||++
T Consensus 229 ~~~~~------~~~~d~l~~ll~~~~~~~---~~~~~~i~~---~~~~~~~ag~~tta~ 275 (491)
T 3dax_A 229 NLQKR------ESISELISLRMFLNDTLS---TFDDLEKAK---THLVVLWASQANTIP 275 (491)
T ss_dssp HHTTC------BSCCHHHHHHHHHHHHHB---CCCHHHHHH---HHHHHHHHHHTTHHH
T ss_pred Hhhcc------cchhHHHHHHHHHHHhcC---CChHHHHHH---HHHHHHHHhccchHH
Confidence 33222 236799999886543322 488999998 555999999999974
No 43
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.94 E-value=6.5e-26 Score=195.61 Aligned_cols=222 Identities=13% Similarity=0.173 Sum_probs=168.2
Q ss_pred cCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCch-hhhcccc--cCCccccccCCChh
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPEI-LAGKHAN--YDYLVMPGAPYGPH 138 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~g~~ 138 (335)
+..+++.++.++ ++||||+++++ |+.+.|+++||+++++|+.++. |.+++.. .....+. ..+.++++.+ |+.
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 110 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGR--FVRGPSMTRDEPRTRPEMVKGGLLSMD-PPE 110 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCTT--EESGGGGTSCCCBSSSSCCCCSGGGCC-TTH
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCCC--cccCccccccccccCcccccccCccCC-chH
Confidence 456889999999 89999999997 8899999999999999998753 6555432 1111111 1346777776 999
Q ss_pred HHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHH-HHHHHHHHHHHhcccccCCCcCCC
Q 019805 139 LRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVF-MFNLAIMSRMLFGKRYTEENENNV 217 (335)
Q Consensus 139 w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~ 217 (335)
|+++||+++ +.|++++++.+.+.+.++++++++.|.. ++.++|+.+.+. .+++++++. +||.+.+..
T Consensus 111 h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~----- 178 (417)
T 2y5n_A 111 HSRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAA-----TGQPADLVAMFARQLPVRVICE-LLGVPSADH----- 178 (417)
T ss_dssp HHHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHH-----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-----
T ss_pred HHHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH-----
Confidence 999999999 9999999999999999999999999975 333799997764 699999998 599876421
Q ss_pred CChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHH
Q 019805 218 VTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLL 297 (335)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll 297 (335)
+.+.+....+.. . .. . + .++..++.+.+.+++.++|+++++.. .+|+++.|+
T Consensus 179 ---~~~~~~~~~~~~----~--~~-~--------~--~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~dll~~ll 230 (417)
T 2y5n_A 179 ---DRFTRWSGAFLS----T--AE-V--------T--AEEMQEAAEQAYAYMGDLIDRRRKEP--------TDDLVSALV 230 (417)
T ss_dssp ---HHHHHHHHTTST----T--CC-C--------C--HHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHH
T ss_pred ---HHHHHHHHHHhc----c--cC-C--------C--HHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHH
Confidence 234333322111 0 00 0 1 24667788899999999999988743 469999999
Q ss_pred hccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 298 QLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 298 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+..++ +..++++++.+ +++++++||+|||++
T Consensus 231 ~~~~~---~~~ls~~ei~~---~~~~l~~AG~eTta~ 261 (417)
T 2y5n_A 231 QARDQ---QDSLSEQELLD---LAIGLLVAGYESTTT 261 (417)
T ss_dssp HCCBT---TBCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred hhhcc---CCCCCHHHHHH---HHHHHHHHhHHHHHH
Confidence 87543 23699999999 566999999999974
No 44
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.94 E-value=1.9e-27 Score=203.79 Aligned_cols=225 Identities=17% Similarity=0.123 Sum_probs=165.9
Q ss_pred CCCCCcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCC-chhhhcccccCCc
Q 019805 50 GPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRP-EILAGKHANYDYL 128 (335)
Q Consensus 50 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 128 (335)
+++.+|++||+..+..+++.++.+++++||||++ ++|+.++|+++||+++++|+.++ .|.+++ .......+. +.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 4566899999988866788999999999999999 99888999999999999999876 577765 222222222 36
Q ss_pred cccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHhccc
Q 019805 129 VMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKR 208 (335)
Q Consensus 129 ~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 208 (335)
++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|. ++++|+.+.+..+++|+++.++||.+
T Consensus 78 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~-------~~~~dl~~~~~~~~~~vi~~~~fG~~ 148 (389)
T 1n97_A 78 GLLTDW-GESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR-------GEERDLDHEMLALSLRLLGRALFGKP 148 (389)
T ss_dssp STTTCC-HHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC-------SCCEEHHHHHHHHHHHHHHHHHHSSC
T ss_pred ccccCC-cHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc-------CCcCcHHHHHHHHHHHHHHHHHcCCc
Confidence 787776 999999999999 999999999999999999999998875 36799999999999999999999998
Q ss_pred ccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCC
Q 019805 209 YTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERG 288 (335)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 288 (335)
++ + ++.+.+..+....... .++++.+++ ....++..++.+.+.+++.++|+++
T Consensus 149 ~~--~--------~~~~~~~~~~~~~~~~----~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~r------------ 201 (389)
T 1n97_A 149 LS--P--------SLAEHALKALDRIMAQ----TRSPLALLD-LAAEARFRKDRGALYREAEALIVHP------------ 201 (389)
T ss_dssp CC--H--------HHHHHHHHHHHHHHHH----HHCGGGGGC-HHHHHHHHHHHHHHHHHHGGGTTST------------
T ss_pred ch--H--------HHHHHHHHHHHHHHHH----HhhHHHhcC-CchhHHHHHHHHHHHHHHHHHHHHH------------
Confidence 75 1 3444444443322110 111122322 1123444555555555555444321
Q ss_pred CCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 289 TNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 289 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|+ + .++++|+.+ ++.++++||+|||++
T Consensus 202 -------ll------~---~l~~~~l~~---~~~~~~~aG~~Tt~~ 228 (389)
T 1n97_A 202 -------PL------S---HLPRERALS---EAVTLLVAGHETVAS 228 (389)
T ss_dssp -------TG------G---GSCHHHHHH---HHHHHHHHHSHHHHH
T ss_pred -------hc------c---cCCHHHHHH---HHHHHHHcCchhHHH
Confidence 22 1 489999999 566999999999974
No 45
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.94 E-value=1.9e-25 Score=192.48 Aligned_cols=225 Identities=12% Similarity=0.156 Sum_probs=169.0
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhc----ccccCCccccccCCChhH
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGK----HANYDYLVMPGAPYGPHL 139 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~w 139 (335)
..+++.++.++ ++||||+++++++.+.|++++|+++++++.++ ..|++++...... .....+.++++.+ |+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQN-QPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCC-TTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcC-CchH
Confidence 56788889888 58999999999999999999999999999877 4677665321110 0111245777776 9999
Q ss_pred HHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHHHHHHHHHHhcccccCCCcCCCC
Q 019805 140 RQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFNLAIMSRMLFGKRYTEENENNVV 218 (335)
Q Consensus 140 ~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~ 218 (335)
+++||+++ ++|++++++.+.+.+.++++++++.|.+ ++.+|+... ...+++++++.+ ||.+.+..
T Consensus 89 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~------~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~------ 154 (404)
T 3ejb_B 89 RRLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQG------KKKMEVISDFAFPLASFVIANI-IGVPEEDR------ 154 (404)
T ss_dssp HHHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTTT------TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGH------
T ss_pred HHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhhh------cCCcchHHHHHHHHHHHHHHHH-cCCCHHHH------
Confidence 99999999 9999999999999999999999998864 356898655 456999999995 89875432
Q ss_pred ChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHh
Q 019805 219 TPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQ 298 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 298 (335)
..+.+....+...... |+. ....++..++.+.+.+++.++|+++++.. ..|+++.|+
T Consensus 155 --~~~~~~~~~~~~~~~~-------p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll- 211 (404)
T 3ejb_B 155 --EQLKEWAASLIQTIDF-------TRS-----RKALTEGNIMAVQAMAYFKELIQKRKRHP--------QQDMISMLL- 211 (404)
T ss_dssp --HHHHHHHHHHHGGGST-------TCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHH-
T ss_pred --HHHHHHHHHHHHhccC-------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------cchHHHHHH-
Confidence 3455555544332211 321 12345677888999999999999988643 579999999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 299 LADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 299 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
...++ ..++++|+.+ ++..+++||+|||++
T Consensus 212 ~~~~~---~~ls~~el~~---~~~~l~~AG~dTta~ 241 (404)
T 3ejb_B 212 KGREK---DKLTEEEAAS---TCILLAIAGHETTVN 241 (404)
T ss_dssp HC-------CCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred hcccC---CCCCHHHHHH---HHHHHHHcchHHHHH
Confidence 43332 3699999999 555999999999974
No 46
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.93 E-value=8.8e-26 Score=194.63 Aligned_cols=236 Identities=13% Similarity=0.107 Sum_probs=171.4
Q ss_pred CCCCCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcc
Q 019805 44 NYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKH 122 (335)
Q Consensus 44 ~~~~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (335)
.....+||.. |+- ..+..+++.++.+++ +||||+++++ |+.++|++++|+++++++.++ .|.+++.......
T Consensus 5 ~~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~ 77 (413)
T 2z36_A 5 VADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPL 77 (413)
T ss_dssp -----CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCC
T ss_pred HHHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccc
Confidence 3445677663 442 334568899999997 7899999997 889999999999999999874 4766643221110
Q ss_pred ---c-cc-----CCcc-ccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH
Q 019805 123 ---A-NY-----DYLV-MPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV 192 (335)
Q Consensus 123 ---~-~~-----~~~~-~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~ 192 (335)
. .. ++.+ +++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+. .++++|+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~~~d~~~~~ 151 (413)
T 2z36_A 78 FTLDAATLQQLRSQPPLMLGMD-GAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLAT----DQRPVDLVQAL 151 (413)
T ss_dssp SSCCHHHHHHHTTSCCCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTC----SCSSEEHHHHT
T ss_pred cccccccccccccccccccccC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCccHHHHH
Confidence 0 11 2467 77666 999999999999 99999999999999999999999999742 36789998766
Q ss_pred H-HHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHH
Q 019805 193 F-MFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEH 271 (335)
Q Consensus 193 ~-~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (335)
. .+++++++.+ ||.+.+.. +.+......+. .. . .+ ++..++.+.+.+++.+
T Consensus 152 ~~~~~~~vi~~~-~G~~~~~~--------~~~~~~~~~~~----~~-----~--------~~--~~~~~~~~~~~~~~~~ 203 (413)
T 2z36_A 152 SLPVPSLVICEL-LGVPYTDH--------DFFQSRTTMMV----SR-----T--------SM--EDRRRAFAELRAYIDD 203 (413)
T ss_dssp TTHHHHHHHHHH-HTCCGGGH--------HHHHHHHHHTT----CS-----S--------CH--HHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHH-hCCCHHHH--------HHHHHHHHHHh----cc-----c--------Cc--HHHHHHHHHHHHHHHH
Confidence 5 6999999995 99875422 23333322211 00 0 01 4566788889999999
Q ss_pred HHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 272 VLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 272 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+|+++++.. .+|+++.|++..++ +..++++++.+ ++.++++||+|||++
T Consensus 204 ~i~~r~~~~--------~~dll~~ll~~~~~---~~~ls~~ei~~---~~~~l~~AG~eTta~ 252 (413)
T 2z36_A 204 LITRKESEP--------GDDLFSRQIARQRQ---EGTLDHAGLVS---LAFLLLTAGHETTAN 252 (413)
T ss_dssp HHHHHHSSC--------CSSHHHHHHHHHHH---HSCCCHHHHHH---HHHHHHHHHSHHHHH
T ss_pred HHHHHHhCC--------CCCHHHHHHHhhcC---CCCCCHHHHHH---HHHHHHhcchHHHHH
Confidence 999887642 46999999986432 23699999999 566999999999974
No 47
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.93 E-value=3.9e-25 Score=190.45 Aligned_cols=220 Identities=13% Similarity=0.177 Sum_probs=168.5
Q ss_pred cCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhh-----cccccCCccccccCCCh
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAG-----KHANYDYLVMPGAPYGP 137 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~ 137 (335)
+..+++.++.++ ++|||||++++++.+.|+|++|+++++++.++. |++++..... ......+.++++.+ |+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMD-PP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCC-ch
Confidence 456889999999 899999999999999999999999999998764 7776543211 11111356777766 99
Q ss_pred hHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHHHHHHHHHHhcccccCCCcCC
Q 019805 138 HLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFNLAIMSRMLFGKRYTEENENN 216 (335)
Q Consensus 138 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~ 216 (335)
.|+++||+++ +.|++++++.+.+.+.++++++++.|.+ ++++|+... ...+++++++.+ ||.+.+..
T Consensus 94 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~---- 161 (411)
T 3a4g_A 94 DHTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT------DGPVDLMREYAFQIPVQVICEL-LGVPAEDR---- 161 (411)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS------SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGH----
T ss_pred HHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh------cCCccHHHHHHHHhHHHHHHHH-hCCCHHHH----
Confidence 9999999999 9999999999999999999999999864 257999755 568999999975 99876421
Q ss_pred CCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHH
Q 019805 217 VVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVL 296 (335)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l 296 (335)
..+.+....+... .| + ++..++.+.+.+++.++|+++++.. .+|+++.|
T Consensus 162 ----~~~~~~~~~~~~~---------~p-------~---~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~l 210 (411)
T 3a4g_A 162 ----DDFSAWSSVLVDD---------SP-------A---DDKNAAMGKLHGYLSDLLERKRTEP--------DDALLSSL 210 (411)
T ss_dssp ----HHHHHHHHHHTTS---------SC-------T---TTHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHH
T ss_pred ----HHHHHHHHHHhcc---------CC-------H---HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHH
Confidence 3454444333221 12 1 1445677889999999999988743 46999999
Q ss_pred HhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 297 LQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 297 l~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++..+++ +..++++++.+ ++.++++||+|||++
T Consensus 211 l~~~~~~--~~~ls~~ei~~---~~~~l~~AG~dTt~~ 243 (411)
T 3a4g_A 211 LAVSDED--GDRLSQEELVA---MAMLLLIAGHETTVN 243 (411)
T ss_dssp HHCCCTT--CCCCCHHHHHH---HHHHHHHHHSHHHHH
T ss_pred HHhhccC--CCCCCHHHHHH---HHHHHHHhchhhHHH
Confidence 9875422 23699999999 566999999999974
No 48
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.93 E-value=9.8e-26 Score=193.73 Aligned_cols=221 Identities=12% Similarity=0.062 Sum_probs=168.3
Q ss_pred ccCcchhHHHHHHHHhh--CCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhH
Q 019805 62 LLGEHLHLSFHSLSQKY--GPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHL 139 (335)
Q Consensus 62 ~~~~~~~~~~~~~~~~y--G~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 139 (335)
.+..+++.++.+++++| |||+++++++ +.++|++|+++++|+.+ .+.|.+++..........++.+++..+ |+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYETGEFELMMAGQD-DPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC----CCCTTTTCC-TTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCCCcccccCcccCC-chHH
Confidence 34578899999999999 9999999876 58999999999999954 446776654432111222233455555 9999
Q ss_pred HHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHHHHHHHHHHhcccccCCCcCCCC
Q 019805 140 RQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFNLAIMSRMLFGKRYTEENENNVV 218 (335)
Q Consensus 140 ~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~ 218 (335)
+++|+++. ++|++++++.+.+.+.++++++++.|.+ ++.+|+... ...+++++++. +||.+.+.
T Consensus 93 ~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------- 157 (398)
T 4fb2_A 93 KKYRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE------LGEGDAATWLANEIPARLTAI-LLGLPPED------- 157 (398)
T ss_dssp HHHHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT------TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG-------
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh------cCCccHHHHHHHHHHHHHHHH-HcCCCHHH-------
Confidence 99999999 9999999999999999999999998864 245786544 46899999999 68986543
Q ss_pred ChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHh
Q 019805 219 TPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQ 298 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~ 298 (335)
.+.+.+....+.. ++ ..++..++.+.+.+++.++|+++++.. ..|+++.|++
T Consensus 158 -~~~~~~~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~ 209 (398)
T 4fb2_A 158 -GDTYRRWVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTNP--------GNDIMSRVIM 209 (398)
T ss_dssp -HHHHHHHHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHH
T ss_pred -HHHHHHHHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHH
Confidence 2455555555433 10 113666788899999999999998743 5799999998
Q ss_pred ccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 299 LADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 299 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
...++ ..++++++.+ ++.++++||+|||++
T Consensus 210 ~~~~~---~~l~~~~i~~---~~~~l~~AG~~Tt~~ 239 (398)
T 4fb2_A 210 SKIDG---ESLSEDDLIG---FFTILLLGGIDNTAR 239 (398)
T ss_dssp CCBTT---BCCCHHHHHH---HHHHCCCCCCHHHHH
T ss_pred cccCC---CCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 76542 3699999999 555999999999974
No 49
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.2e-25 Score=191.48 Aligned_cols=220 Identities=13% Similarity=0.164 Sum_probs=168.6
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHHHH
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTR 143 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 143 (335)
..+++.++.++++ |||||++. .+.|+|++|+++++++.++. .|++++... .... .+.++++.+ |+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--ccccccccC-chHHHHHH
Confidence 4578889999987 99999774 37899999999999998654 677765432 1111 346777776 99999999
Q ss_pred HHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchH-HHHHHHHHHHHHHHHhcccccCCCcCCCCChHH
Q 019805 144 KIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLK-ECVFMFNLAIMSRMLFGKRYTEENENNVVTPKE 222 (335)
Q Consensus 144 ~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 222 (335)
++++ ++|++++++.+.+.+.++++++++.|.+ + +++|+. +....+++++++.+ ||.+.+.. ..
T Consensus 88 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~-~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~--------~~ 151 (398)
T 2xkr_A 88 KLVN-AGFTRKRVKDKEASIAALCDTLIDAVCE-----R-GECDFVRDLAAPLPMAVIGDM-LGVRPEQR--------DM 151 (398)
T ss_dssp HHHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT-----T-SEEEHHHHTTTHHHHHHHHHH-HTCCGGGH--------HH
T ss_pred HHhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh-----c-CCccHHHHHHHHHHHHHHHHH-hCCCHHHH--------HH
Confidence 9999 9999999999999999999999999864 3 479999 45568999999999 99986432 35
Q ss_pred HHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccCC
Q 019805 223 LTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADD 302 (335)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 302 (335)
+.+....+..... |.+ + +...++..++.+.+.+++.++|+++++.. ..|+++.|++...+
T Consensus 152 ~~~~~~~~~~~~~--------~~~--~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~~~~~ 211 (398)
T 2xkr_A 152 FLRWSDDLVTFLS--------SHV--S--QEDFQITMDAFAAYNDFTRATIAARRADP--------TDDLVSVLVSSEVD 211 (398)
T ss_dssp HHHHHHHHHHHHT--------SCC--C--HHHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHHCCBT
T ss_pred HHHHHHHHHhccC--------ccc--c--hhhHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHHhhcc
Confidence 5555555443221 110 1 23345677788899999999999987732 47999999987653
Q ss_pred CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 303 PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 303 ~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+..++++++.+ ++.++++||+|||++
T Consensus 212 ---~~~ls~~ei~~---~~~~l~~AG~eTt~~ 237 (398)
T 2xkr_A 212 ---GERLSDDELVM---ETLLILIGGDETTRH 237 (398)
T ss_dssp ---TBCCCHHHHHH---HHHHHHHHHSHHHHH
T ss_pred ---CCCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 23699999999 556999999999974
No 50
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.93 E-value=3e-25 Score=190.99 Aligned_cols=221 Identities=13% Similarity=0.179 Sum_probs=169.9
Q ss_pred cCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCch--h----hhc---cc-c----cCCc
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEI--L----AGK---HA-N----YDYL 128 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--~----~~~---~~-~----~~~~ 128 (335)
+..+++.++.++ ++||||+++++++.+.|++++|+++++++.++ .|.+++.. . ... .+ . ..+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 356789999999 99999999999999999999999999999876 47666532 1 110 11 0 0246
Q ss_pred cccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcc
Q 019805 129 VMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGK 207 (335)
Q Consensus 129 ~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~ 207 (335)
++++.+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|.+ ++++|+...+ ..+++++++.+ ||.
T Consensus 89 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~vi~~~-~G~ 159 (404)
T 1z8o_A 89 NMGTSD-PPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVGD------SGVVDIVDRFAHPLPIKVICEL-LGV 159 (404)
T ss_dssp SGGGCC-TTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSCS------SSEEEHHHHTTTHHHHHHHHHH-TTC
T ss_pred ccccCC-CcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhhh------cCCcchHHHHhHHHHHHHHHHH-hCC
Confidence 777776 999999999999 9999999999999999999999998853 4689998765 68999999985 998
Q ss_pred cccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCC
Q 019805 208 RYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKER 287 (335)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 287 (335)
+.+..+ .+.+....+.. . . .| . .++..++.+.+.+++.++|+++++..
T Consensus 160 ~~~~~~--------~~~~~~~~~~~-~---~----~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~~------- 207 (404)
T 1z8o_A 160 DEKYRG--------EFGRWSSEILV-M---D----PE--------R-AEQRGQAAREVVNFILDLVERRRTEP------- 207 (404)
T ss_dssp CGGGTT--------THHHHHHHHHC-C---C----GG--------G-HHHHHHHHHHHHHHHHHHHHHHHHSC-------
T ss_pred CHHHHH--------HHHHHHHHHhc-c---C----Ch--------h-HHHHHHHHHHHHHHHHHHHHHHHhCC-------
Confidence 765432 34444444332 1 0 11 1 35667788899999999999988743
Q ss_pred CCCcHHHHHHhc-cCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 288 GTNDMVDVLLQL-ADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 288 ~~~d~l~~ll~~-~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
..|+++.|++. .++ +..++++|+.+ ++.++++||+|||++
T Consensus 208 -~~dll~~ll~~~~~~---~~~l~~~ei~~---~~~~~~~AG~~Tt~~ 248 (404)
T 1z8o_A 208 -GDDLLSALIRVQDDD---DGRLSADELTS---IALVLLLAGFEASVS 248 (404)
T ss_dssp -CSSHHHHHHHCEETT---TEECCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHhhhccc---CCCCCHHHHHH---HHHHHHhcchHHHHH
Confidence 46999999987 442 23699999999 566999999999974
No 51
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.93 E-value=3.6e-25 Score=190.75 Aligned_cols=222 Identities=15% Similarity=0.144 Sum_probs=168.5
Q ss_pred ccCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCC-chhhhc--ccc--------cC-Cc
Q 019805 62 LLGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRP-EILAGK--HAN--------YD-YL 128 (335)
Q Consensus 62 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~-~~~~~~--~~~--------~~-~~ 128 (335)
.+..+++..+.++ ++||||+++++ |+.+.|+++||+++++|+.++. +.+++ ...... ... .. +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 4456889999999 99999999997 8899999999999999998764 44433 111100 000 02 35
Q ss_pred cccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHH-HHHHHHHHHHHhcc
Q 019805 129 VMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVF-MFNLAIMSRMLFGK 207 (335)
Q Consensus 129 ~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~ 207 (335)
++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+ .++++|+.+.+. .+++++++. +||.
T Consensus 91 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~ 162 (411)
T 1gwi_A 91 SMLTVD-GAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA-----DGGVVDLKAAFAYPLPMYVVAD-LMGI 162 (411)
T ss_dssp SGGGCC-HHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC-----SCCCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred ccccCC-cHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCcchHHHHhhHHHHHHHHH-HhCC
Confidence 676665 999999999999 9999999999999999999999999863 356899998886 599999996 6998
Q ss_pred cccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCC
Q 019805 208 RYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKER 287 (335)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 287 (335)
+.+. .+.+.+....+.... . ..++..++.+.+.+++.++|+++++..
T Consensus 163 ~~~~--------~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~------- 209 (411)
T 1gwi_A 163 EEAR--------LPRLKVLFEKFFSTQ--------T----------PPEEVVATLTELASIMTDTVAAKRAAP------- 209 (411)
T ss_dssp CGGG--------HHHHHHHHHHHHCTT--------S----------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------
T ss_pred CHHH--------HHHHHHHHHHHhccC--------C----------ChHHHHHHHHHHHHHHHHHHHHHHhCC-------
Confidence 7542 234555554433210 0 114566788889999999999987643
Q ss_pred CCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 288 GTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 288 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
..|+++.|++..++ +..++++++.+ ++.++++||+|||++
T Consensus 210 -~~d~l~~ll~~~~~---~~~l~~~~i~~---~~~~~~~AG~dTt~~ 249 (411)
T 1gwi_A 210 -GDDLTSALIQASEN---GDHLTDAEIVS---TLQLMVAAGHETTIS 249 (411)
T ss_dssp -CSSHHHHHHHCCBT---TBCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHhccc---CCCCCHHHHHH---HHHHHHHHHhhHHHH
Confidence 46999999987543 23699999999 566999999999974
No 52
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.93 E-value=1.1e-25 Score=194.54 Aligned_cols=227 Identities=13% Similarity=0.100 Sum_probs=171.2
Q ss_pred cCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCc-----hh-h--hcccccC-Ccccccc
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPE-----IL-A--GKHANYD-YLVMPGA 133 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~ 133 (335)
+..+++.++.++ ++||||++ + ++.+.|++++|+++++|+.++. |.+++. .. . ...+... +.++++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence 356789999998 78999999 6 6778999999999999998764 877752 11 1 1111101 3567777
Q ss_pred CCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHHHHHHHHHHhcccccCC
Q 019805 134 PYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFNLAIMSRMLFGKRYTEE 212 (335)
Q Consensus 134 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~ 212 (335)
+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+ + +++|+... ...+++|+++.+ ||.+.+..
T Consensus 99 ~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~-~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~ 169 (419)
T 1q5d_A 99 P-PEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG-----Q-EEFDVVRDYAEGIPMRAISAL-LKVPAECD 169 (419)
T ss_dssp C-HHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT-----S-SCEETTTTTGGGSHHHHHHHH-TTCCGGGH
T ss_pred C-chHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCCCHHHHHHHHHHHHHHHHH-hCCCHHHH
Confidence 6 999999999999 9999999999999999999999999964 3 37998864 589999999998 99876532
Q ss_pred CcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCC-c
Q 019805 213 NENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTN-D 291 (335)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d 291 (335)
..+.+....+...... ..+|+.. ...++..++.+.+.+++.++|+++++.. .+ |
T Consensus 170 --------~~~~~~~~~~~~~~~~----~~~P~~~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~~d 224 (419)
T 1q5d_A 170 --------EKFRRFGSATARALGV----GLVPRVD-----EETKTLVASVTEGLALLHGVLDERRRNP--------LEND 224 (419)
T ss_dssp --------HHHHHHHHHHHHHTTT----TTSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSC
T ss_pred --------HHHHHHHHHHHHhccc----ccccCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCC
Confidence 3455555555443221 1234321 2235677888899999999999988742 34 9
Q ss_pred HHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 292 MVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 292 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.|++..++ +..++++++.+ ++.++++||+|||++
T Consensus 225 ll~~ll~~~~~---~~~l~~~ei~~---~~~~l~~AG~dTta~ 261 (419)
T 1q5d_A 225 VLTMLLQAEAD---GSRLSTKELVA---LVGAIIAAGTDTTIY 261 (419)
T ss_dssp HHHHHHHHHHS---STTCCHHHHHH---HHHHHHHHHSHHHHH
T ss_pred HHHHHHhhhcc---CCCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 99999987533 23699999999 566999999999974
No 53
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.93 E-value=4.9e-25 Score=190.68 Aligned_cols=226 Identities=12% Similarity=0.095 Sum_probs=164.4
Q ss_pred CcchhHHHHHHHHhhCCceEEecC--CeeEEEeCCHHHHHHHHHhcCCccCCCCch--------h-hhc----cc-ccCC
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLG--LNIMVVCSSAEVAELFLKTHDLTFATRPEI--------L-AGK----HA-NYDY 127 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--------~-~~~----~~-~~~~ 127 (335)
..+++.++.+++ +||||+++++| +.++|+|++|+++++|+.++ .|++++.. . ... .. ..++
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 457888898886 49999999987 77899999999999999875 57776531 1 000 01 1123
Q ss_pred ccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhc
Q 019805 128 LVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFG 206 (335)
Q Consensus 128 ~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG 206 (335)
.++++.+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|.+ .| ++|+...+ ..+++++++.+ ||
T Consensus 96 ~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~g-~~dl~~~~~~~~~~~vi~~~-~G 166 (425)
T 2z3t_A 96 NWLVFLD-PPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA-----QR-RPDLVEGFAAPLPILVISAL-LG 166 (425)
T ss_dssp TCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT-----SS-SCBHHHHTTTHHHHHHHHHH-HT
T ss_pred cccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cC-CccHHHHHHHHHHHHHHHHH-hC
Confidence 6788776 999999999999 9999999999999999999999999965 33 79998754 78999999998 99
Q ss_pred ccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccC
Q 019805 207 KRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKE 286 (335)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 286 (335)
.+.+.. ..+.+....+.... ..+| +. ....++..++.+.+.+++.++|+++++..
T Consensus 167 ~~~~~~--------~~~~~~~~~~~~~~------~~~~-~~----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------ 221 (425)
T 2z3t_A 167 IPEEDH--------TWLRANAVALQEAS------TTRA-RD----GRGYARAEAASQEFTRYFRREVDRRGGDD------ 221 (425)
T ss_dssp CCGGGH--------HHHHHHHHHHHTTC------TTCC-C-------HHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred CCHHHH--------HHHHHHHHHHHhhc------cccC-CC----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC------
Confidence 876532 34555444443321 1112 00 12335667788889999999998876532
Q ss_pred CCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 287 RGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 287 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
..|+++.|++..+++ ..++++++.+ ++.++++||+|||++
T Consensus 222 --~~dll~~ll~~~~~~---~~ls~~el~~---~~~~l~~AG~dTt~~ 261 (425)
T 2z3t_A 222 --RDDLLTLLVRARDTG---SPLSVDGIVG---TCVHLLTAGHETTTN 261 (425)
T ss_dssp ----CHHHHHHHHHHTT---CCCCHHHHHH---HHHHHHHHTTTTHHH
T ss_pred --CCCHHHHHHHhhccC---CCCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 569999999875432 3699999999 556999999999974
No 54
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.93 E-value=1.5e-25 Score=193.87 Aligned_cols=228 Identities=13% Similarity=0.160 Sum_probs=167.0
Q ss_pred cCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccc--------cCCccccccC
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHAN--------YDYLVMPGAP 134 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 134 (335)
+..+++.++.++ ++||||+++++| .++|++|+++++++.+.. .+++++......... ..+.++++.+
T Consensus 27 ~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 101 (418)
T 3r9b_A 27 TRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD 101 (418)
T ss_dssp GTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred hccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccchhhcC
Confidence 367889999888 578999998775 899999999999997654 445544322111111 1346777777
Q ss_pred CChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCC
Q 019805 135 YGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEEN 213 (335)
Q Consensus 135 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 213 (335)
|+.|+++||+++ ++|++++++.+.+.+.++++++++ +.+ ++++|+...+ ..+++++++. +||.+.+..
T Consensus 102 -g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~- 170 (418)
T 3r9b_A 102 -PPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AVD------GPEFNLIDNLAYPLPVAVICR-LLGVPIEDE- 170 (418)
T ss_dssp -TTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TCC------SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGH-
T ss_pred -CchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hhc------cCCeehHHHHhCcCCHHHHHH-HcCCCHHHH-
Confidence 999999999999 999999999999999999999999 742 3588976555 6899999999 799876532
Q ss_pred cCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHH
Q 019805 214 ENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMV 293 (335)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l 293 (335)
..+.+....+...... .+++.++. ....++..++.+.+.+++.++|+++++.. .+|++
T Consensus 171 -------~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~d~l 228 (418)
T 3r9b_A 171 -------PKFSRASALLAAALDP------FLALTGET-SDLFDEQMKAGMWLRDYLRALIDERRRTP--------GEDLM 228 (418)
T ss_dssp -------HHHHHHHHHHHHTTSC------HHHHHSSC-CTTHHHHHHHHHHHHHHHHHHHHHTTTSC--------CSSHH
T ss_pred -------HHHHHHHHHHHhhcCc------cccccccC-HHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CccHH
Confidence 3455544444332211 11111111 23456778888999999999998876532 57999
Q ss_pred HHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 294 DVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 294 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.|++...++ ..++++|+.+ ++..+++||+|||++
T Consensus 229 ~~ll~~~~~~---~~ls~~ei~~---~~~~l~~AG~eTTa~ 263 (418)
T 3r9b_A 229 SGLVAVEESG---DQLTEDEIIA---TCNLLLIAGHETTVN 263 (418)
T ss_dssp HHHHHHHHHS---SSCCHHHHHH---HHHHHHHHHHHTHHH
T ss_pred HHHHHhhhcc---CCCCHHHHHH---HHHHHHHHhHHHHHH
Confidence 9999774332 3699999999 566999999999974
No 55
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.93 E-value=2.3e-24 Score=185.11 Aligned_cols=214 Identities=14% Similarity=0.157 Sum_probs=163.4
Q ss_pred cCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCchh-hhcccccCCcc--ccccCCC--
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPEIL-AGKHANYDYLV--MPGAPYG-- 136 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~g-- 136 (335)
+..+++.++.++ ++||||+++++ ++.+.|+|++|+++++|+.++. |.+++... ...... .+.+ +++.+ |
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~-~~~~~~l~~~~-g~~ 98 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDER--IGRTHPDPPSAAQYV-RSPFLDLLISD-ADA 98 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTT--EESBCSSGGGSCCSS-CCHHHHTTCBC-SCH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCC--CCCCccccccCCccc-ccccccceeeC-CCC
Confidence 356788999999 89999999997 8899999999999999998753 65554332 111111 2345 66665 9
Q ss_pred ----hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccC
Q 019805 137 ----PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTE 211 (335)
Q Consensus 137 ----~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~ 211 (335)
+.|+++||+++ ++|++++++.+.+.+.++++++++.|.. .|+++|+.+.+ ..+++++++. +||.+.+.
T Consensus 99 ~~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 171 (404)
T 2xbk_A 99 ESGRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA-----QGPPGDLHGELTVPFALTVLCE-VIGVPPQR 171 (404)
T ss_dssp HHHHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-----TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG
T ss_pred CCCCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH
Confidence 99999999999 9999999999999999999999999985 56789998766 5799999998 69987542
Q ss_pred CCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCc
Q 019805 212 ENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTND 291 (335)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 291 (335)
. +.+.+....+... . . ++ +..++.+.+.+++.++|+++++.. .+|
T Consensus 172 ~--------~~~~~~~~~~~~~---~-----~--------~p---~~~~~~~~~~~~~~~~i~~r~~~~--------~~d 216 (404)
T 2xbk_A 172 R--------AELTTLLAGIAKL---D-----D--------RE---GAVRAQDDLFGYVAGLVEHKRAEP--------GPD 216 (404)
T ss_dssp H--------HHHHHHHHHHTBS---S-----C--------HH---HHHHHHHHHHHHHHHHHHHHHHSC--------CSS
T ss_pred H--------HHHHHHHHHHHhc---c-----C--------cH---HHHHHHHHHHHHHHHHHHHHHhCC--------CCC
Confidence 1 3444444332210 0 0 11 456677889999999999988743 468
Q ss_pred HHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 292 MVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 292 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.| + + + .++++++.+ ++.++++||+|||++
T Consensus 217 ll~~l-~--~----~-~ls~~ei~~---~~~~l~~AG~dTta~ 248 (404)
T 2xbk_A 217 IISRL-N--D----G-ELTEDRVAH---LAMGLLFAGLDSVAS 248 (404)
T ss_dssp HHHHH-H--S----S-SCCHHHHHH---HHHHHHHHTTHHHHH
T ss_pred HHHHh-h--c----C-CCCHHHHHH---HHHHHHHhchHHHHH
Confidence 99998 2 1 2 599999999 566999999999974
No 56
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.93 E-value=3.2e-25 Score=196.35 Aligned_cols=266 Identities=13% Similarity=0.060 Sum_probs=168.4
Q ss_pred ccCCCCCCCCCCCC-CcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh
Q 019805 40 RNKLNYLPPPGPKP-WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL 118 (335)
Q Consensus 40 ~~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~ 118 (335)
.++++.+.||||++ +|++||+..+..+++.++.+++++|||||++++|+.++|+++||+++++++.++...+..++...
T Consensus 12 ~~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~ 91 (498)
T 3b6h_A 12 RRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI 91 (498)
T ss_dssp -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred HhccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence 34556678999988 89999998886678999999999999999999999999999999999999976653233332221
Q ss_pred -hhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805 119 -AGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL 197 (335)
Q Consensus 119 -~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 197 (335)
..... .+.+++..+ |+.| |+.+. +.|+.+.++.+.+.+.+++...++....... .....+++...+..+++
T Consensus 92 ~~~~~~--~g~~~~~~~-~~~~---rr~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~l~~~~~~vi~ 163 (498)
T 3b6h_A 92 FLMERI--FDVQLPHYS-PSDE---KARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAG-SGWHEMGLLDFSYSFLL 163 (498)
T ss_dssp HHHHHT--SCCCCTTCC-HHHH---HHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEEHHHHHHHHHH
T ss_pred HHHHHH--cCCCccccC-HHHH---HHHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccC-CCcceecHHHHHHHHHH
Confidence 11111 234555554 6666 56666 7899888988888888877777766543211 02346789999999999
Q ss_pred HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccc-cHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQ-GNVKRMKAARKKIDKFYEHVLDEH 276 (335)
Q Consensus 198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~ 276 (335)
++++.++||.+++..+. .........+.+....+. .+...+|++.+.+.+ ...++..++.+.+.+. +++++
T Consensus 164 ~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 235 (498)
T 3b6h_A 164 RAGYLTLYGIEALPRTH---ESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKL---LSPAR 235 (498)
T ss_dssp HHHHHHHHCBSCSSCCH---HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH---TCHHH
T ss_pred HHHHHhhcCcccccccc---cchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHHHH---HHHHH
Confidence 99999999998754320 000112222233222211 122345543221111 1222333433333332 22333
Q ss_pred HHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 277 ERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 277 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.+. .....|+++.+++..++++ .++++++. .++ ++++||+|||++
T Consensus 236 ~~~------~~~~~d~l~~ll~~~~~~~---~~~~~~~~-~~~---~~l~ag~~tt~~ 280 (498)
T 3b6h_A 236 LAR------RAHRSKWLESYLLHLEEMG---VSEEMQAR-ALV---LQLWATQGNMGP 280 (498)
T ss_dssp HTT------CBSCCHHHHHHHHHHHHTT---CCHHHHHH-HHH---HHHHHHHTTHHH
T ss_pred Hhc------cccHHHHHHHHHHHHHhCC---CCHHHHHH-HHH---HHHHHhhhchHH
Confidence 322 2345799999997654322 46777766 444 788999999974
No 57
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.92 E-value=1.2e-24 Score=188.23 Aligned_cols=225 Identities=12% Similarity=0.138 Sum_probs=168.0
Q ss_pred CcchhHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHHH
Q 019805 64 GEHLHLSFHSLSQKYG-PLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQT 142 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 142 (335)
..+++.++.++++++| ||+++..++ +.++|++|+.+++|+.+. +.|.+++...........+.+++..+ |+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCC-cHHHHHH
Confidence 4688999999987766 899998876 489999999999999544 46777653221111112335666666 9999999
Q ss_pred HHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcCCCCChH
Q 019805 143 RKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENENNVVTPK 221 (335)
Q Consensus 143 R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 221 (335)
|++++ ++|++++++.+.+.+.++++++++.|.+ ++.+|+...+ ..++.++++.+ ||.+.+. ..
T Consensus 114 R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~d~~~~~~~~~~~~v~~~~-~G~~~~~--------~~ 177 (421)
T 3lxh_A 114 RKAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD------RGHCEFGSEFSTVFPVRVFLAL-AGLPVED--------AT 177 (421)
T ss_dssp HHHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT------TSEEEHHHHTTTTHHHHHHHHH-HTCCGGG--------HH
T ss_pred HHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh------cCCeehHHHHHHHHHHHHHHHH-cCCCHHH--------HH
Confidence 99999 9999999999999999999999999864 3468875555 66888888875 8976543 24
Q ss_pred HHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccC
Q 019805 222 ELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLAD 301 (335)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 301 (335)
.+.++...+..... .+|. ...++..++.+++.+++.++|+++++.. .+|+++.|++...
T Consensus 178 ~~~~~~~~~~~~~~------~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ll~~~~ 236 (421)
T 3lxh_A 178 KLGLLANEMTRPSG------NTPE-------EQGRSLEAANKGFFEYVAPIIAARRGGS--------GTDLITRILNVEI 236 (421)
T ss_dssp HHHHHHHHHHSCCC------SSHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTCC--------CCSHHHHHHTSCB
T ss_pred HHHHHHHHHhcccc------CCCc-------hhHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHhhhc
Confidence 56655555433211 1121 2245777888999999999999887642 5799999998765
Q ss_pred CCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 302 DPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 302 ~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++ ..++++|+.+ +++++++||+|||++
T Consensus 237 ~~---~~l~~~ei~~---~~~~l~~AG~eTta~ 263 (421)
T 3lxh_A 237 DG---KPMPDDRALG---LVSLLLLGGLDTVVN 263 (421)
T ss_dssp TT---BCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred cC---CCCCHHHHHH---HHHHHHHHhHHHHHH
Confidence 42 3699999999 556999999999974
No 58
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.92 E-value=3.7e-25 Score=190.55 Aligned_cols=218 Identities=10% Similarity=0.091 Sum_probs=162.0
Q ss_pred CcchhHHHHHHHHhhCCceEEecCC--eeEEEeCCHHHHHHHHHhcCCccCCCCchhh----hcccccC-CccccccCCC
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGL--NIMVVCSSAEVAELFLKTHDLTFATRPEILA----GKHANYD-YLVMPGAPYG 136 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~g 136 (335)
.++++.++.+++ +||||+++++++ .+.+++++|+.+++|+.+. .|.+++.... ....... +.++++.+ |
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFAD-Q 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCC-T
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCC-c
Confidence 456668888887 899999999754 7899999999999999863 4665543211 1111111 46777766 9
Q ss_pred hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHH-HHHHHHHHHHHhcccccCCCcC
Q 019805 137 PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVF-MFNLAIMSRMLFGKRYTEENEN 215 (335)
Q Consensus 137 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~~~ 215 (335)
+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.+ +|+++|+.+.+. .+++++++. +||.+.+..
T Consensus 102 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~--- 171 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILA-----EGPPADLVERVLEPFPIAVVSE-VMGVPAADR--- 171 (411)
T ss_dssp THHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-----HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH---
T ss_pred hHHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH---
Confidence 99999999999 9999999999999999999999999986 356899998776 699999999 599875421
Q ss_pred CCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHH
Q 019805 216 NVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDV 295 (335)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ 295 (335)
..+..+... +.. ..+ ..++..++.+.+.+++.++|+++++.. .+|+++.
T Consensus 172 -----~~~~~~~~~----~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~dll~~ 220 (411)
T 2dkk_A 172 -----ERVHSWTRQ----IIS-----TSG---------GAEAAERAKRGLYGWITETVRARAGSE--------GGDVYSM 220 (411)
T ss_dssp -----HHHHHHHGG----GCS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTCC--------SSCHHHH
T ss_pred -----HHHHHHHHH----HHh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHH
Confidence 233322221 111 111 123566778889999999998776532 4699999
Q ss_pred HHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 296 LLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 296 ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|++. .+ +..++++|+.+ +++++++|| |||++
T Consensus 221 ll~~-~~---~~~ls~~el~~---~~~~l~~AG-eTta~ 251 (411)
T 2dkk_A 221 LGAA-VG---RGEVGETEAVG---LAGPLQIGG-EAVTH 251 (411)
T ss_dssp HHHH-HH---TTSSCTTSHHH---HHHHHHHTH-HHHHH
T ss_pred HHHh-cC---CCCCCHHHHHH---HHHHHHHhh-HHHHH
Confidence 9987 32 23699999999 566999999 99974
No 59
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.92 E-value=1.5e-25 Score=197.44 Aligned_cols=256 Identities=14% Similarity=0.077 Sum_probs=163.6
Q ss_pred cCCCCCCCCCCCC-CcccccccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCch-h
Q 019805 41 NKLNYLPPPGPKP-WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEI-L 118 (335)
Q Consensus 41 ~~~~~~~ppgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~ 118 (335)
++++.+.||||++ +|++||+..+..+++.++.+++++|||||++++|+.++|++++|+++++++.++.. +..++.. .
T Consensus 13 ~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~ 91 (475)
T 3b98_A 13 RTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQV 91 (475)
T ss_dssp CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHH
T ss_pred cccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHH
Confidence 3555678999998 89999999887788999999999999999999999999999999999999976542 3322211 1
Q ss_pred hhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHH
Q 019805 119 AGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLA 198 (335)
Q Consensus 119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~ 198 (335)
..... .+.+++..+ |+.| |+++. ++|+.++++.+.+.+.+++.++++.+...........+++...+..++++
T Consensus 92 ~~~~~--~g~~~~~~~-~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (475)
T 3b98_A 92 LMKRI--FNMILPSHN-PESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK 164 (475)
T ss_dssp HHHHT--TCCCCTTCC-HHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred HHHHH--hCCCCCCCC-hHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence 11111 134555555 6655 67777 89999999999999999999888776432100022356888888888888
Q ss_pred HHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccc-cHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805 199 IMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQ-GNVKRMKAARKKIDKFYEHVLDEHE 277 (335)
Q Consensus 199 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~ 277 (335)
+++...||.+.. ....+.+....+... ...+|++.+.+.+ ...++..+..+.+.+++ ++++.
T Consensus 165 ~~~~~~~g~~~~--------~~~~~~~~~~~~~~~------~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 227 (475)
T 3b98_A 165 TGYLTVFGAENN--------NSAALTQIYEEFRRF------DKLLPKLARTTVNKEEKQIASAAREKLWKWL---TPSGL 227 (475)
T ss_dssp HHHHHHHCCTTS--------CHHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH---SCTTS
T ss_pred HhhhheeCCccc--------cchhcHHHHHHHHHH------HhhhHHHHHHhcChhhhHHHHHHHHHHHHHH---HHHHh
Confidence 888888884321 122333333322221 1234433221111 12223333333322221 11111
Q ss_pred HcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 278 RHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 278 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+ ......|+++.+++..++++ .++++++. .+. ++++||+|||++
T Consensus 228 ~------~~~~~~d~l~~ll~~~~~~~---~~~~~~i~-~~~---~~l~ag~~TTa~ 271 (475)
T 3b98_A 228 D------RKPREQSWLGSYVKQLQDEG---IDAEMQRR-AML---LQLWVTQGNAGP 271 (475)
T ss_dssp C------CCCCTTSHHHHHHHHHHHTT---CCHHHHHH-HHH---HHHHHHHSSHHH
T ss_pred h------ccccccHHHHHHHHHHHHcC---CCHHHHHH-HHH---HHHHHccccHHH
Confidence 1 12346799999997654322 47788776 555 899999999974
No 60
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.92 E-value=1.9e-24 Score=186.38 Aligned_cols=222 Identities=10% Similarity=0.018 Sum_probs=165.0
Q ss_pred CcchhHHHHHHHHhhCCce-----EEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh-hhc--cc-c-cCCcccccc
Q 019805 64 GEHLHLSFHSLSQKYGPLM-----QLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL-AGK--HA-N-YDYLVMPGA 133 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~-----~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 133 (335)
..+++.++.+++ +||||+ ++++ .+.|++++|+++++|+.++ ..|++++... ... .+ . ..+.++++.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 467888898885 689999 8866 5799999999999999876 4677765432 111 22 1 235678877
Q ss_pred CCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchH-HHHHHHHHHHHHHHHhcccccCC
Q 019805 134 PYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLK-ECVFMFNLAIMSRMLFGKRYTEE 212 (335)
Q Consensus 134 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~ 212 (335)
+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+ . +++|+. +.+..+++++++. +||.+.+..
T Consensus 100 ~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~ 170 (414)
T 2uuq_A 100 D-PPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRA-----N-GGGDIVTELFKPLPSMVVAH-YLGVPEEDW 170 (414)
T ss_dssp C-TTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHH-----T-TEEEHHHHTTTHHHHHHHHH-HTTCCGGGH
T ss_pred C-chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCccHHHHHHHHhHHHHHHH-HhCCCHHHH
Confidence 6 999999999999 9999999999999999999999999986 3 359997 5567999999999 599887532
Q ss_pred CcCCCCChHHHHHHHHHHHHhhccccccccc-ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCc
Q 019805 213 NENNVVTPKELTEIVEEVFFLSGVLDIGGAI-PWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTND 291 (335)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 291 (335)
+.+.+....+.... .+ |.. ++..++.+++.+++.++|+++++.. ..|
T Consensus 171 --------~~~~~~~~~~~~~~-------~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d 218 (414)
T 2uuq_A 171 --------TQFDGWTQAIVAAN-------AVDGAT---------TGALDAVGSMMAYFTGLIERRRTEP--------ADD 218 (414)
T ss_dssp --------HHHHHHHHHHHHHH-------HC--------------CCHHHHHHHHHHHHHHHHHHTTSC--------CSS
T ss_pred --------HHHHHHHHHHHhhc-------ccCCch---------hHHHHHHHHHHHHHHHHHHHHHhCC--------CCC
Confidence 34444444433310 11 211 1234567788899999998876532 479
Q ss_pred HHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 292 MVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 292 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++.|++...+++ +..++++++.+ ++.++++||+|||++
T Consensus 219 ll~~ll~~~~~~~-~~~ls~~ei~~---~~~~l~~AG~eTt~~ 257 (414)
T 2uuq_A 219 AISHLVAAGVGAD-GDTAGTLSILA---FTFTMVTGGNDTVTG 257 (414)
T ss_dssp HHHHHHHTTTTCT-TCHHHHHHHHH---HHHHHHHHHSHHHHH
T ss_pred HHHHHHhcccccC-CCCCCHHHHHH---HHHHHHHhhHHHHHH
Confidence 9999998754211 23689999999 566999999999974
No 61
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.92 E-value=2.8e-24 Score=184.68 Aligned_cols=220 Identities=10% Similarity=0.068 Sum_probs=165.0
Q ss_pred ccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHH
Q 019805 62 LLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQ 141 (335)
Q Consensus 62 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 141 (335)
.+..+++.++.+++++ |||+++..++ +.++|++|+++++++.+. +.|.+++...........+.+++..+ |+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccC-CcHHHH
Confidence 3457899999999999 9999998874 588999999999999765 46777653221111111234555565 999999
Q ss_pred HHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcCCCCCh
Q 019805 142 TRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENENNVVTP 220 (335)
Q Consensus 142 ~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 220 (335)
+||+++ ++|++++++.+.+.+.++++++++.|.+ + +.+|+...+ ..++.++++. +||.+.+. .
T Consensus 97 ~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~-~~~d~~~~~~~~~~~~v~~~-~~G~~~~~--------~ 160 (396)
T 3oft_A 97 FRTPVM-KGLASRFVVALEPKVQAVARKLMESLRP-----R-GSCDFVSDFAEILPLNIFLT-LIDVPLED--------R 160 (396)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGG-----G-SEEEHHHHTTTTHHHHHHHH-HTTCCGGG--------H
T ss_pred HHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh-----c-CCccHHHHHHHHHHHHHHHH-HcCCCHHH--------H
Confidence 999999 9999999999999999999999999975 2 467876555 5677888877 58876432 2
Q ss_pred HHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhcc
Q 019805 221 KELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLA 300 (335)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~ 300 (335)
..+.+....+..... .++..++.+.+.+++.++|+++++.. .+|+++.|++..
T Consensus 161 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ll~~~ 213 (396)
T 3oft_A 161 PRLRQLGVQLTRPDG-------------------SMTVEQLKQAADDYLWPFIEKRMAQP--------GDDLFSRILSEP 213 (396)
T ss_dssp HHHHHHHHHHHSCCS-------------------SCCHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHTSC
T ss_pred HHHHHHHHHHhCCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHHhh
Confidence 355555544432100 12445677889999999999998753 579999999876
Q ss_pred CCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 301 DDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 301 ~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+++ ..++++++.+ +++++++||+|||++
T Consensus 214 ~~~---~~l~~~el~~---~~~~l~~AG~dTta~ 241 (396)
T 3oft_A 214 VGG---RPWTVDEARR---MCRNLLFGGLDTVAA 241 (396)
T ss_dssp BTT---BCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred ccC---CCCCHHHHHH---HHHHHHHHhhHHHHH
Confidence 542 3699999999 555999999999974
No 62
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.91 E-value=5.5e-25 Score=191.21 Aligned_cols=224 Identities=12% Similarity=0.117 Sum_probs=155.1
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHHHH
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTR 143 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 143 (335)
..+++.++.++ ++||||+++..++ .++|++|+++++|+.++. .|.+++......... ++.+++..+ |+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~-~~~~l~~~d-g~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM-RGPVLAQMH-GKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC-C--------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccccc-CCCccccCC-cHHHHHHH
Confidence 46778888776 6899999987665 899999999999998765 477665443322222 223466666 99999999
Q ss_pred HHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchH-HHHHHHHHHHHHHHHhcccccCCCcCCCCChHH
Q 019805 144 KIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLK-ECVFMFNLAIMSRMLFGKRYTEENENNVVTPKE 222 (335)
Q Consensus 144 ~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 222 (335)
+++. ++|+++.++.+.+.+.++++++++.|.+ ++.+|+. +....+++++++. +||.+.... ..
T Consensus 126 r~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~--------~~ 189 (441)
T 3nc3_A 126 RIVV-RSFIGDALDHLSPLIKQNAENLLAPYLE------RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDH--------EK 189 (441)
T ss_dssp HHHH-HHHHHTHHHHHHHHHHHHHHHHHTTTTT------TTEEECCCCCHHHHHHHHHHH-HTTCCGGGH--------HH
T ss_pred HHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHH--------HH
Confidence 9999 9999999999999999999999998864 3568864 4556799999999 489875432 35
Q ss_pred HHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccCC
Q 019805 223 LTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADD 302 (335)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 302 (335)
+.++...+........ .+ ....++..++.+++.+++.++|+++++.. .+|+++.|++...+
T Consensus 190 ~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~~Dll~~Ll~~~~~ 250 (441)
T 3nc3_A 190 ISEWHSGVADFITSIS----QS-------PEARAHSLWCSEQLSQYLMPVIKERRVNP--------GSDLISILCTSEYE 250 (441)
T ss_dssp HHHHHHHHHHHHHCSC----CC-------HHHHHHHHHHHHHHHHHHHHHHHHHTTSC--------CSSHHHHHCC----
T ss_pred HHHHHHHHHHhccccc----CC-------hHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHHHHhhcc
Confidence 6666555554432211 01 11235666788899999999999886533 56999999987653
Q ss_pred CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 303 PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 303 ~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+ ..++++|+.+ +++.+++||+|||++
T Consensus 251 ~---~~ls~~el~~---~~~~ll~AG~eTTa~ 276 (441)
T 3nc3_A 251 G---MALSDKDILA---LILNVLLAATEPADK 276 (441)
T ss_dssp -----CCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred C---CCCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 2 3699999999 566999999999974
No 63
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.91 E-value=2.3e-24 Score=185.11 Aligned_cols=214 Identities=13% Similarity=0.102 Sum_probs=156.7
Q ss_pred HHHHHHHHhhCCceEEecC-Ce---eEEEeCCHHHHHHHHHhcCCccCCCCc------hhhhccc--ccCCccccccCCC
Q 019805 69 LSFHSLSQKYGPLMQLKLG-LN---IMVVCSSAEVAELFLKTHDLTFATRPE------ILAGKHA--NYDYLVMPGAPYG 136 (335)
Q Consensus 69 ~~~~~~~~~yG~i~~~~~~-~~---~~v~i~~p~~~~~i~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~g 136 (335)
..+.+++++ |||++++++ |. ++|+|++|+++++++.++. .|.+++. ....... ...+.++++.+ |
T Consensus 17 ~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g 93 (398)
T 1lfk_A 17 DPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYD-P 93 (398)
T ss_dssp EECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGGCC-T
T ss_pred ChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccccC-C
Confidence 344567776 999999875 45 8999999999999993323 3665543 1101111 11246777776 9
Q ss_pred hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHH-HHHHHHHHHHhcccccCCCcC
Q 019805 137 PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFM-FNLAIMSRMLFGKRYTEENEN 215 (335)
Q Consensus 137 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~-~~~~vi~~~~fG~~~~~~~~~ 215 (335)
+.|+++||+++ +.|++++++.+.+.+.++++++++.|.+ .|+++|+.+.+.. ++.++++. +||.+.+..
T Consensus 94 ~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~--- 163 (398)
T 1lfk_A 94 PEHTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER-----AGSPADLIAFVADKVPGAVLCE-LVGVPRDDR--- 163 (398)
T ss_dssp THHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH---
T ss_pred HHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH---
Confidence 99999999999 9999999999999999999999999975 4568999999987 99999998 599876421
Q ss_pred CCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHH
Q 019805 216 NVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDV 295 (335)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ 295 (335)
+.+.+....... . ++..++..++.+.+.+++.++|+++++.. ..|+++.
T Consensus 164 -----~~~~~~~~~~~~---------~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ 212 (398)
T 1lfk_A 164 -----DMFMKLCHGHLD---------A---------SLSQKRRAALGDKFSRYLLAMIARERKEP--------GEGMIGA 212 (398)
T ss_dssp -----HHHHHHHHHTTC---------T---------TSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHH
T ss_pred -----HHHHHHHHHHHh---------c---------ccchHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHH
Confidence 244443332211 0 11225667788899999999999988743 4699999
Q ss_pred HHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 296 LLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 296 ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|++.. + ..++++++.+ ++.++++||+|||++
T Consensus 213 ll~~~-~----~~l~~~el~~---~~~~l~~AG~dTt~~ 243 (398)
T 1lfk_A 213 VVAEY-G----DDATDEELRG---FCVQVMLAGDDNISG 243 (398)
T ss_dssp HHHHH-G----GGSCHHHHHH---HHHHHHHHTSHHHHH
T ss_pred HHHhc-C----CCCCHHHHHH---HHHHHHHHhccHHHH
Confidence 99865 1 2599999999 556999999999974
No 64
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.91 E-value=3e-24 Score=184.40 Aligned_cols=221 Identities=14% Similarity=0.122 Sum_probs=164.5
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhc------ccccC-CccccccCCC
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGK------HANYD-YLVMPGAPYG 136 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~g 136 (335)
..+++.++.++ ++||||++ + +.+.|+|++|+++++++.+. .|.+++...... ..... +.++++.+ |
T Consensus 12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g 84 (397)
T 3buj_A 12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-E 84 (397)
T ss_dssp HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-T
T ss_pred ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCC-c
Confidence 34678888776 58999999 6 57899999999999999863 466543221010 11111 46777776 9
Q ss_pred hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHHHHHHHHHHhcccccCCCcC
Q 019805 137 PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFNLAIMSRMLFGKRYTEENEN 215 (335)
Q Consensus 137 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~ 215 (335)
+.|+++|++++ ++|++++++.+.+.+.++++++++.|.+ + +++|+... ...+++++++.+ ||.+.+..
T Consensus 85 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~-~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~--- 153 (397)
T 3buj_A 85 PDHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA-----R-GAMDVVDELAYPLALRAVLGL-LGLPAADW--- 153 (397)
T ss_dssp THHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT-----T-TEEEHHHHTHHHHHHHHHHHH-HTCCGGGH---
T ss_pred hhHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh-----c-CCeehHHHHHHHhHHHHHHHH-hCCCHHHH---
Confidence 99999999999 9999999999999999999999999974 2 47998754 578999999999 99876532
Q ss_pred CCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHH
Q 019805 216 NVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDV 295 (335)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ 295 (335)
+.+......+...... .++ +...++..++.+.+.+++.++|+++++.. .+|+++.
T Consensus 154 -----~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ 208 (397)
T 3buj_A 154 -----GAVGRWSRDVGRTLDR-----GAS-------AEDMRRGHAAIAEFADYVERALARRRREG--------GEDLLAL 208 (397)
T ss_dssp -----HHHHHHHHHHHGGGCS-----SCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCSHHHH
T ss_pred -----HHHHHHHHHHHhhcCC-----CCC-------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CCCHHHH
Confidence 3455555544432211 011 12345667788899999999999988743 4699999
Q ss_pred HHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 296 LLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 296 ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|++..++ + . ++++|+.+ ++.++++||+|||++
T Consensus 209 ll~~~~~-~--~-ls~~ei~~---~~~~~~~AG~~Tt~~ 240 (397)
T 3buj_A 209 MLDAHDR-G--L-MSRNEIVS---TVVTFIFTGHETVAS 240 (397)
T ss_dssp HHHHHHT-T--S-SCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhhhc-C--C-CCHHHHHH---HHHHHHHcCchHHHH
Confidence 9987532 2 3 99999999 556999999999974
No 65
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.91 E-value=4.9e-24 Score=183.65 Aligned_cols=219 Identities=12% Similarity=0.133 Sum_probs=162.8
Q ss_pred CcchhHHHHHHHHhhCCceEEecCC--eeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccc---cC-CccccccCCCh
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGL--NIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHAN---YD-YLVMPGAPYGP 137 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~ 137 (335)
..+++.++.++++ ||||+++...| .+.++|++++++++++.+.. .|++++......... .. +.+++..+ |+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~-~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPSA-PLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTTS-SEECTTCSSTTCCSSSCCTTTTTSGGGCC-HH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhChh-hhcCCccccccccccccccccCCCccccC-cH
Confidence 4578999999887 89999997445 78999999999999996543 577665433221111 11 44566666 99
Q ss_pred hHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcCC
Q 019805 138 HLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENENN 216 (335)
Q Consensus 138 ~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 216 (335)
.|+++||+++ ++|++++++.+.+.+.++++++++.|.+ + +++|+.+.+ ..+++++++.+ ||.+.+.
T Consensus 113 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~-~~~dl~~~~~~~~~~~vi~~l-~G~~~~~----- 179 (415)
T 3mgx_A 113 QHRKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD-----G-EVCDAATAIGPRIPAAVVCEI-LGVPAED----- 179 (415)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS-----S-SCEESTTTTTTHHHHHHHHHH-HTCCGGG-----
T ss_pred HHHHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCcchHHHHHHHHHHHHHHHH-cCCCHHH-----
Confidence 9999999999 9999999999999999999999998754 3 479999877 67999999985 8875432
Q ss_pred CCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHH
Q 019805 217 VVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVL 296 (335)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l 296 (335)
...+.+....+..... ....| . ...++.+++.+++.++|+++++.. .+|+++.|
T Consensus 180 ---~~~~~~~~~~~~~~~~----~~~~~-------~----~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~l 233 (415)
T 3mgx_A 180 ---EDMLIDLTNHAFGGED----ELFDG-------M----TPRQAHTEILVYFDELITARRKEP--------GDDLVSTL 233 (415)
T ss_dssp ---HHHHHHHHHHHTSCCC--------C-------C----CHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHH
T ss_pred ---HHHHHHHHHHHHcccC----cccch-------H----HHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHH
Confidence 2455555555433211 00111 0 112677889999999999998753 57999999
Q ss_pred HhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 297 LQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 297 l~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++.. .++++|+.+ +++.+++||+|||++
T Consensus 234 l~~~-------~ls~~el~~---~~~~ll~AG~eTTa~ 261 (415)
T 3mgx_A 234 VTDD-------DLTIDDVLL---NCDNVLIGGNETTRH 261 (415)
T ss_dssp HHCT-------TSCHHHHHH---HHHHHHHHHHTTHHH
T ss_pred HhCC-------CCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 9864 489999999 555999999999974
No 66
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.90 E-value=8.8e-25 Score=193.41 Aligned_cols=167 Identities=12% Similarity=0.093 Sum_probs=125.7
Q ss_pred cCCCCCCCCCCCCCccccccccc-----CcchhHHHHHHHHhhCC-ceEEecCCeeE-------EEeCCHHHHHHHHHhc
Q 019805 41 NKLNYLPPPGPKPWPLIGNLNLL-----GEHLHLSFHSLSQKYGP-LMQLKLGLNIM-------VVCSSAEVAELFLKTH 107 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------v~i~~p~~~~~i~~~~ 107 (335)
...+.+.||||+++|++|++..+ ..+++.++.+++++||+ ||++++++.++ |++.+++..+.++...
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 34577899999999999998776 57889999999999999 99999988777 6677777666666432
Q ss_pred C----CccCCCCchhhhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCC
Q 019805 108 D----LTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYS 183 (335)
Q Consensus 108 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 183 (335)
. +.+....... ...++......+...+|+.|+++|+++. +.|+... +.+.+.+.+.++++++.|.+... ++
T Consensus 103 ~v~k~~~~~~~~~~~-~~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~--~~ 177 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPS-TELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELS--LK 177 (495)
T ss_dssp TEECSSCTTSSSCCC-GGGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHH--HH
T ss_pred cccccccccccCCCC-ccccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc--cC
Confidence 1 1121111111 1222211122333334999999999999 8998754 88999999999999999976432 45
Q ss_pred CccchHHHHHHHHHHHHHHHHhcccccCC
Q 019805 184 TPVHLKECVFMFNLAIMSRMLFGKRYTEE 212 (335)
Q Consensus 184 ~~~d~~~~~~~~~~~vi~~~~fG~~~~~~ 212 (335)
+++|+.+.+..+++++++.++||.+....
T Consensus 178 ~~vdl~~~~~~~~~~~i~~~~~G~~~~~~ 206 (495)
T 3dsk_A 178 GKADFGGSSDGTAFNFLARAFYGTNPADT 206 (495)
T ss_dssp SSEESHHHHHHHHHHHHHHHHHSCCGGGS
T ss_pred CCccHHHHHHHHHHHHHHHHHcCCCcchh
Confidence 78999999999999999999999987654
No 67
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.90 E-value=9.3e-23 Score=174.76 Aligned_cols=222 Identities=14% Similarity=0.157 Sum_probs=161.2
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHHHH
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTR 143 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 143 (335)
..+++.++.+++++ |||+++..| .+++++++.+++++.+. .|+.++...........+++++..+ |+.|+++|
T Consensus 19 ~~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R 91 (394)
T 2wiy_A 19 RNNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSD-PPHHTVLR 91 (394)
T ss_dssp HHCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHH
T ss_pred ccCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCC-chHHHHHH
Confidence 34778888888665 899988653 68999999999999754 3554322211111111235666666 99999999
Q ss_pred HHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHhcccccCCCcCCCCChHHH
Q 019805 144 KIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKEL 223 (335)
Q Consensus 144 ~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~ 223 (335)
|+++ +.|+++.++.+.+.+.+.++++++.+. .++++|+...+..+++++++..+||.+.+. ...+
T Consensus 92 ~~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~------~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~--------~~~~ 156 (394)
T 2wiy_A 92 RQTN-KWFTPKLVDGWVRTTRELVGDLLDGVE------AGQVIEARRDLAVVPTHVTMARVLQLPEDD--------ADAV 156 (394)
T ss_dssp HHHH-TTCSHHHHHHHTHHHHHHHHHHHHTCC------TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC--------HHHH
T ss_pred HHHH-hccCHHHHHHHHHHHHHHHHHHHHHHh------ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH--------HHHH
Confidence 9999 999999999999999999999988774 346799999999999999999999986432 2345
Q ss_pred HHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccCCC
Q 019805 224 TEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDP 303 (335)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~ 303 (335)
.+.+....... ...|. ....++..++.+.+.+++.++|+++++.. .+|+++.|++...+
T Consensus 157 ~~~~~~~~~~~------~~~p~------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~Ll~~~~~- 215 (394)
T 2wiy_A 157 MEAMFEAMLMQ------SAEPA------DGDVDRAAVAFGYLSARVAEMLEDKRVNP--------GDGLADSLLDAARA- 215 (394)
T ss_dssp HHHHHHHHGGG------SSSCC------TTHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHHHHHT-
T ss_pred HHHHHHHHHhc------cCCcc------chHHHHHHHHHHHHHHHHHHHHHHhhcCC--------CCcHHHHHHHhhhc-
Confidence 54443322110 01121 12234556677888999999999887643 36899999976543
Q ss_pred CcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 304 TLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 304 ~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+ .++++|+.+ +++++++||+|||++
T Consensus 216 ~---~ls~~el~~---~~~~l~~AG~eTTa~ 240 (394)
T 2wiy_A 216 G---EITESEAIA---TILVFYAVGHMAIGY 240 (394)
T ss_dssp T---SSCHHHHHH---HHHHHHHHTTTHHHH
T ss_pred C---CCCHHHHHH---HHHHHHHhhhhhHHH
Confidence 2 499999999 555999999999974
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.90 E-value=8.8e-23 Score=176.54 Aligned_cols=225 Identities=13% Similarity=0.168 Sum_probs=163.3
Q ss_pred CcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccCCCCc---hhhhc-----c-cccCCcccccc
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFATRPE---ILAGK-----H-ANYDYLVMPGA 133 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~ 133 (335)
..+++.++.+++++ |||+++.. ++.+.++|++++.+++++.+.. .|++++. ..... . ....+.+++..
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCccccc
Confidence 45688999999876 99999987 5577999999999999998764 4655431 11111 0 11133556666
Q ss_pred CCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCC
Q 019805 134 PYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEE 212 (335)
Q Consensus 134 ~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~ 212 (335)
+ |+.|+++|++++ +.|++.+++.+.+.+.+.++++++.|. .++++|+...+ ..+++++++. +||.+....
T Consensus 115 d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~------~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~ 185 (426)
T 3rwl_A 115 D-RPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLP------VGEEFDWVDRVSIEITTQMLAT-LFDFPFEER 185 (426)
T ss_dssp C-TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSC------SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGT
T ss_pred C-chHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhh------cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHH
Confidence 6 999999999999 999999999999999999999999883 45789977776 6888999887 799864432
Q ss_pred CcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcH
Q 019805 213 NENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDM 292 (335)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~ 292 (335)
+.+..+......... +.. ....++..++.+++.+++.++|+++++. ...+|+
T Consensus 186 --------~~~~~~~~~~~~~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~~~~dl 237 (426)
T 3rwl_A 186 --------RKLTRWSDVTTAAPG--------GGV-----VESWDQRKTELLECAAYFQVLWNERVNK-------DPGNDL 237 (426)
T ss_dssp --------HHHHHHHHHHTCCTT--------SSS-----CSSHHHHHHHHHHHHHHHHHHHHHHHTS-------CCCSSH
T ss_pred --------HHHHHHHHHHHhccC--------ccc-----cccHHHHHHHHHHHHHHHHHHHHHHhhc-------CCCCCH
Confidence 244443322211100 100 1223455677789999999999988432 236799
Q ss_pred HHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 293 VDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 293 l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++.|++...++ .++++|+.+ +++.+++||+|||++
T Consensus 238 l~~ll~~~~~~----~ls~~el~~---~~~~l~~AG~eTTa~ 272 (426)
T 3rwl_A 238 ISMLAHSPATR----NMTPEEYLG---NVLLLIVGGNDTTRN 272 (426)
T ss_dssp HHHHHHCGGGG----GCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCC----CCCHHHHHH---HHHHHHHHHHHHHHH
Confidence 99999875432 489999999 555999999999974
No 69
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.88 E-value=2.2e-23 Score=179.94 Aligned_cols=221 Identities=8% Similarity=0.063 Sum_probs=159.8
Q ss_pred CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCc-hhh-hc----c-cccCCccccccCCC
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPE-ILA-GK----H-ANYDYLVMPGAPYG 136 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~-~~----~-~~~~~~~~~~~~~g 136 (335)
..+++.+ ++.++||||+++.+|+.. ++|++++.+++|+.++. +..... ... .. . ....+.+++..+ |
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 105 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-G 105 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-H
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-c
Confidence 4567777 556679999999886656 99999999999998765 332211 100 00 0 001134666666 9
Q ss_pred hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHH-HHHHHHHHHHHHHhcccccCCCcC
Q 019805 137 PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKEC-VFMFNLAIMSRMLFGKRYTEENEN 215 (335)
Q Consensus 137 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~ 215 (335)
+.|+++||+++ ++|+++.++.+.+.+.++++++++.+ . +| .+|+... ...+++++++.+ ||.+....
T Consensus 106 ~~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~-----~g-~~d~~~~~~~~~~~~vi~~l-~G~~~~~~--- 173 (416)
T 3p3o_A 106 ADHRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P-----QG-DFDFVQHFPHPLPALVMCQL-LGFPLEDY--- 173 (416)
T ss_dssp HHHHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C-----SS-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH---
T ss_pred hHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c-----cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH---
Confidence 99999999999 99999999999999999999999999 3 34 4896554 456999999995 89764422
Q ss_pred CCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHH
Q 019805 216 NVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDV 295 (335)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ 295 (335)
+.+..+...+.... .+. ......++..++.+++.+++.++|+++++.. .+|+++.
T Consensus 174 -----~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~ 228 (416)
T 3p3o_A 174 -----DTVGRLSIETNLGL---------ALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP--------GDDLTSD 228 (416)
T ss_dssp -----HHHHHHHHTTCGGG---------TTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHH
T ss_pred -----HHHHHHHHHHHhhc---------ccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC--------CccHHHH
Confidence 34443333322211 110 0123456778889999999999999998753 5799999
Q ss_pred HHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 296 LLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 296 ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|++...++ .++++|+.+ +++.+++||+|||++
T Consensus 229 ll~~~~~~----~ls~~el~~---~~~~l~~AG~eTTa~ 260 (416)
T 3p3o_A 229 IVRAFHDG----VLDDYELRT---LVATVLVAGYETTNH 260 (416)
T ss_dssp HHHHHHTT----SSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHhhccC----CCCHHHHHH---HHHHHHHhhccHHHH
Confidence 99876542 599999999 555999999999974
No 70
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.88 E-value=3.9e-23 Score=177.29 Aligned_cols=217 Identities=14% Similarity=0.122 Sum_probs=157.8
Q ss_pred cCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcCCccC-C-CCch--hhhc--cccc-CCccccccC
Q 019805 63 LGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHDLTFA-T-RPEI--LAGK--HANY-DYLVMPGAP 134 (335)
Q Consensus 63 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~ 134 (335)
+..+++..+.++ ++|||||++++ |+.+.|++++|+++++++.++. |. + ++.. .... .+.. .+.+++++
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH-
Confidence 456889999999 99999999997 7899999999999999998753 55 4 3321 1110 1111 23456555
Q ss_pred CChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCC
Q 019805 135 YGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEEN 213 (335)
Q Consensus 135 ~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 213 (335)
.|+++||+++ +.|+++ ++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++++. +||.+.+..
T Consensus 90 ---~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~- 157 (396)
T 1n40_A 90 ---ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLIT-----EGAPADLRNDFADPLATALHCK-VLGIPQEDG- 157 (396)
T ss_dssp ---HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHH-----HCSCEETTTTTHHHHHHHHHHH-HHTCCGGGH-
T ss_pred ---HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHhHHHHHHH-HhCCChhhH-
Confidence 9999999999 999999 999999999999999999976 24679998665 5899999999 799876421
Q ss_pred cCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHH
Q 019805 214 ENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMV 293 (335)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l 293 (335)
+.+.+.......... ..| .++..++.+.+ +++.++|+ .. ....|++
T Consensus 158 -------~~~~~~~~~~~~~~~------~~p----------~~~~~~~~~~~-~~~~~~i~----~~------~~~~dll 203 (396)
T 1n40_A 158 -------PKLFRSLSIAFMSSA------DPI----------PAAKINWDRDI-EYMAGILE----NP------NITTGLM 203 (396)
T ss_dssp -------HHHHHTHHHHTBCCS------SCC----------HHHHHHHHHHH-HHHHHHHH----CT------TCCSHHH
T ss_pred -------HHHHHHHHHHhcccc------CCC----------HHHHHHHHHHH-HHHHHHHh----CC------CCCCCHH
Confidence 345544444322110 011 13555666777 88888776 11 2357999
Q ss_pred HHHHhccCC-CCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 294 DVLLQLADD-PTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 294 ~~ll~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
+.|++...+ + +..++++++.+ ++.++++||+|||++
T Consensus 204 ~~ll~~~~~~~--~~~l~~~~i~~---~~~~~~~AG~dTt~~ 240 (396)
T 1n40_A 204 GELSRLRKDPA--YSHVSDELFAT---IGVTFFGAGVISTGS 240 (396)
T ss_dssp HHHHHHHTSGG--GTTSCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccc--cCCCCHHHHHH---HHHHHHHHhhhhHHH
Confidence 999986521 1 23699999999 556999999999974
No 71
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.87 E-value=3.4e-22 Score=169.60 Aligned_cols=204 Identities=13% Similarity=0.122 Sum_probs=151.2
Q ss_pred hHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCc-hh-hh-----c-ccccC---CccccccCCC
Q 019805 68 HLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPE-IL-AG-----K-HANYD---YLVMPGAPYG 136 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~-~~-----~-~~~~~---~~~~~~~~~g 136 (335)
+..+.++ ++||||++++ | .+++++|+.+++++.++. .|++++. .. .. . .+. + +.++++.+ |
T Consensus 2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~d-g 73 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFF-DIPTRYTMLTSD-P 73 (367)
T ss_dssp HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCC-CCGGGSSGGGCC-T
T ss_pred CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchh-hcccccccccCC-c
Confidence 4567777 4799999987 3 799999999999998763 6776642 21 11 1 121 2 36788776 9
Q ss_pred hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcC
Q 019805 137 PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENEN 215 (335)
Q Consensus 137 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 215 (335)
+.|+++||+++ ++|++++++. +.+.++++++++.|. | .+|+.+.+ ..+++++++. +||.+ +.
T Consensus 74 ~~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~-------g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~---- 136 (367)
T 3b4x_A 74 PLHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD-------E-EFDVIESFAIPLPILVISK-MLGIN-PD---- 136 (367)
T ss_dssp THHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC-------S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC----
T ss_pred hhHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc-------C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc----
Confidence 99999999999 9999999888 999999999988774 2 39999765 7999999999 79998 42
Q ss_pred CCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHH
Q 019805 216 NVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDV 295 (335)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ 295 (335)
...+.+....+..... ..|.. .++. ++.+.+.+++.++|+++++.. .+|+++.
T Consensus 137 ----~~~~~~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ 189 (367)
T 3b4x_A 137 ----VKKVKDWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKGKE--------IVDLTGK 189 (367)
T ss_dssp ----HHHHHHHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTTTC--------CSSHHHH
T ss_pred ----HHHHHHHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhcCC--------CCCHHHH
Confidence 2456655555443211 12311 1122 567788889999998876532 5699999
Q ss_pred HHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 296 LLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 296 ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|++. .++++|+.+ ++.++++||+|||++
T Consensus 190 ll~~--------~ls~~el~~---~~~~l~~AG~eTt~~ 217 (367)
T 3b4x_A 190 IANS--------NLSELEKEG---YFILLMIAGNETTTN 217 (367)
T ss_dssp HHTS--------SSCHHHHHH---HHHHHHHTTTHHHHH
T ss_pred HHhc--------cCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 9975 389999999 566999999999974
No 72
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.87 E-value=4e-22 Score=175.39 Aligned_cols=165 Identities=13% Similarity=0.063 Sum_probs=122.9
Q ss_pred cCCCCCCCCCCCCCccccccccc-----Cc-chhHHHHHHHHhhCC-ceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 41 NKLNYLPPPGPKPWPLIGNLNLL-----GE-HLHLSFHSLSQKYGP-LMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 41 ~~~~~~~ppgp~~~p~~g~~~~~-----~~-~~~~~~~~~~~~yG~-i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
...+.+.||||+++|++|++..+ .. +++.++.+++++||+ ||+++++ .+..|++.+....+.++..
T Consensus 4 ~~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~ 83 (473)
T 3dan_A 4 SSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDV 83 (473)
T ss_dssp GGSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCC
Confidence 34678899999999999998875 45 789999999999999 9999986 3455666666655455531
Q ss_pred ----cCCccCCCCchhhhcccccC-CccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCC
Q 019805 107 ----HDLTFATRPEILAGKHANYD-YLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSS 181 (335)
Q Consensus 107 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~ 181 (335)
+...+...... .....++. ..+++..+ |+.|+++|+++. +.|+++ ++.+.+.+.+.++++++.|.+...
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~-~~~h~~~R~~~~-~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~-- 157 (473)
T 3dan_A 84 SKVEKKDLFTGTYMP-STKLTGGYRVLSYLDPS-EPRHAQLKNLLF-FMLKNS-SNRVIPQFETTYTELFEGLEAELA-- 157 (473)
T ss_dssp TTEECSSCTTSSSCC-CGGGGTTSCCGGGCCTT-SHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cceeccccccccccC-CccccCCCcceeeeCCC-cHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 11112111111 11122211 22334444 999999999999 999984 899999999999999999986432
Q ss_pred CCCccchHHHHHHHHHHHHHHHHhcccccC
Q 019805 182 YSTPVHLKECVFMFNLAIMSRMLFGKRYTE 211 (335)
Q Consensus 182 ~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 211 (335)
+++++|+.+.+.++++++++.++||.+.+.
T Consensus 158 ~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 158 KNGKAAFNDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp HHSCEECHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred cCCcccHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 357899999999999999999999998876
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.86 E-value=7.9e-22 Score=167.55 Aligned_cols=205 Identities=12% Similarity=0.188 Sum_probs=149.0
Q ss_pred hhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCc-----hhhh--cc--ccc-CCccccccCCC
Q 019805 67 LHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPE-----ILAG--KH--ANY-DYLVMPGAPYG 136 (335)
Q Consensus 67 ~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~g 136 (335)
++..+.++ ++||||+++ | +.+++++|+++++++.+.. .|++++. .... .. +.. .+.++++.+ |
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNFS-KFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-P 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCTT-TEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-T
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCcc-cccccccccccccccccccccccccccccccccCC-C
Confidence 35567777 589999987 4 5899999999999998754 6877764 1101 11 111 125677776 9
Q ss_pred hhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcC
Q 019805 137 PHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENEN 215 (335)
Q Consensus 137 ~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 215 (335)
+.|+++||+++ ++|++++++.+.+.+.++++++++.| + +| ++|+.+.+ ..+++++++.+ ||.+.+..
T Consensus 74 ~~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~-----~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--- 141 (368)
T 1io7_A 74 PLHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D-----PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK--- 141 (368)
T ss_dssp THHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C-----TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH---
T ss_pred hHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h-----cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH---
Confidence 99999999999 99999999999999999999999998 4 44 69999876 78999999999 99876421
Q ss_pred CCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHH
Q 019805 216 NVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDV 295 (335)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ 295 (335)
+.+.+....+ ... .. .|. ..++..++.+.+.+++.++| .. ..|+++.
T Consensus 142 -----~~~~~~~~~~----~~~-~~--~p~--------~~~~~~~~~~~~~~~~~~~i-----~~--------~~d~l~~ 188 (368)
T 1io7_A 142 -----EKFKEWSDLV----AFR-LG--KPG--------EIFELGKKYLELIGYVKDHL-----NS--------GTEVVSR 188 (368)
T ss_dssp -----HHHHHHGGGC----TTS-CC--CTT--------CHHHHHHHHHHHHHHHHHHT-----TS--------SCHHHHH
T ss_pred -----HHHHHHHHHH----Hhc-cC--ChH--------HHHHHHHHHHHHHHHHHHHh-----CC--------CCCHHHH
Confidence 2333322111 110 00 121 12455667777888887777 11 4689999
Q ss_pred HHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 296 LLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 296 ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
|++. .++++|+.+ ++.++++||+|||++
T Consensus 189 ll~~--------~l~~~ei~~---~~~~l~~AG~dTt~~ 216 (368)
T 1io7_A 189 VVNS--------NLSDIEKLG---YIILLLIAGNETTTN 216 (368)
T ss_dssp HHTS--------SCCHHHHHH---HHHHHHHTTHHHHHH
T ss_pred HHhc--------cCCHHHHHH---HHHHHHHhhhHHHHH
Confidence 9975 389999999 566999999999974
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.85 E-value=3e-21 Score=162.36 Aligned_cols=193 Identities=10% Similarity=0.062 Sum_probs=139.0
Q ss_pred HhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHHHHHHHHHhhcChhH
Q 019805 76 QKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKR 155 (335)
Q Consensus 76 ~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~ 155 (335)
++||||+++ | .+++++|+++++++.++. .|.+++...... .++.++++.+ |+.|+++||+++ ++|++++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~---~~~~~l~~~~-g~~~~~~R~~~~-~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSN---AGGISFITMD-NPEHKEFRDISA-PYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC------CCGGGGCC-HHHHHHHHHHHH-HHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCC---ccccccccCC-chHHHHHHHHhh-hhcCHHH
Confidence 589999986 3 899999999999998764 677765211111 1356777776 999999999999 9999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhh
Q 019805 156 LAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLS 234 (335)
Q Consensus 156 l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (335)
++.+.+.+.++++++++.|. ++|+.+.+ ..+++|+++.+ ||.+.+.. +.+.+....+...
T Consensus 71 l~~~~~~i~~~~~~l~~~l~---------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--------~~~~~~~~~~~~~- 131 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID---------NKDIISEYAVRLPVNIISKI-LGIPDSDM--------PLFKLWSDYIIGN- 131 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT---------TSCHHHHTTTHHHHHHHHHH-HTCCGGGH--------HHHHHHHHHHHTS-
T ss_pred HHHHHHHHHHHHHHHHHhcc---------ccCHHHHHhhhhhHHHHHHH-cCCCHHHH--------HHHHHHHHHHhhc-
Confidence 99999999999999987763 58998865 89999999999 99876422 3455554443321
Q ss_pred cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHH
Q 019805 235 GVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQE 314 (335)
Q Consensus 235 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i 314 (335)
..|++. ..++. ++.+.+.+++.++| .+| ++.|++...+ +..++++++
T Consensus 132 -------~~p~~~------~~~~~-~~~~~~~~~~~~~i---------------~~d-l~~ll~~~~~---~~~l~~~ei 178 (343)
T 2rfb_A 132 -------KRDENF------NYVNN-RMVSRLLEIFKSDS---------------HGI-INVLAGSSLK---NRKLTMDEK 178 (343)
T ss_dssp -------CCSSHH------HHHHH-HHHHHHHHHHHSCC---------------SSH-HHHHHTCBCS---SSBCCHHHH
T ss_pred -------cCcchh------hHHHH-HHHHHHHHHHHHHH---------------hcc-HHHHHhhhcC---CCCCCHHHH
Confidence 113211 11233 55555555555444 357 9999987543 236999999
Q ss_pred HHHHHhhhhhhhccCCCCCC
Q 019805 315 IILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 315 ~~~~~~~~~~~~AG~ett~s 334 (335)
.+ ++.++++||+|||++
T Consensus 179 ~~---~~~~~~~AG~dTt~~ 195 (343)
T 2rfb_A 179 IK---YIMLLIIGGNETTTN 195 (343)
T ss_dssp HH---HHHHHHHHHHHHHHH
T ss_pred HH---HHHHHHHHhhHHHHH
Confidence 99 566999999999974
No 75
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.85 E-value=3.5e-20 Score=159.42 Aligned_cols=225 Identities=9% Similarity=0.111 Sum_probs=154.9
Q ss_pred CcchhHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccccCCccccccCCChhHHHH
Q 019805 64 GEHLHLSFHSLSQKYG-PLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQT 142 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 142 (335)
..+++..+.+++++.+ +++....++ ..++|++.+.+++|+.+.. .|+.+...............++..+ +++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~D-~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKAQMVPTKMD-PPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSSCTTTTTCC-TTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCch-hccCCCcccccccccccccCcccCC-cHHHHHH
Confidence 4577788888876644 455554433 5678899999999997654 5655432211111111122334444 9999999
Q ss_pred HHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-HHHHHHHHHHHHhcccccCCCcCCCCChH
Q 019805 143 RKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-FMFNLAIMSRMLFGKRYTEENENNVVTPK 221 (335)
Q Consensus 143 R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 221 (335)
||+++ ++|++++++.+.+.+.+.++++++.+.. . +.+|+...+ ..+++.+++.+ +|.+.... .
T Consensus 113 Rrll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~-----~-g~~D~v~~~a~~l~~~vi~~l-lg~~~~d~--------~ 176 (417)
T 4dxy_A 113 RKALD-KGLNLAKIRKVEDKVREVASSLIDSFAA-----R-GECDFAAEYAELFPVHVFMAL-ADLPLEDI--------P 176 (417)
T ss_dssp HHHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHT-----T-SEEEHHHHTTTTHHHHHHHHH-TTCCGGGH--------H
T ss_pred HHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhh-----c-CCeeeHHHHHhhhHHHHHHHH-cCCCHHHH--------H
Confidence 99999 9999999999999999999999999975 3 457765544 55677777765 78764432 3
Q ss_pred HHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCCcHHHHHHhccC
Q 019805 222 ELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLAD 301 (335)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 301 (335)
.+.++...+..... ..| ....+....+.+.+.+++.++++++++.. .+|+++.|+....
T Consensus 177 ~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~li~~rr~~~--------~ddl~s~L~~~~~ 235 (417)
T 4dxy_A 177 VLSEYARQMTRPEG------NTP-------EEMATDLEAGNNGFYAYVDPIIRARVGGD--------GDDLITLMVNSEI 235 (417)
T ss_dssp HHHHHHHHHHSCCC------SSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------CCSHHHHHHTCEE
T ss_pred HHHhhhhhhccccc------cCh-------HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------ccchhhhhccccc
Confidence 45544444322111 001 12334566778889999999998876543 5799999998766
Q ss_pred CCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 302 DPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 302 ~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
++ ..++++++.+ ++..+++||+|||++
T Consensus 236 ~~---~~~~~~e~~~---~~~~ll~AG~eTTa~ 262 (417)
T 4dxy_A 236 NG---ERIAHDKAQG---LISLLLLGGLDTVVN 262 (417)
T ss_dssp TT---EECCHHHHHH---HHHHHHHHTTHHHHH
T ss_pred cC---CccchhHHHH---HHHHHHhhcccchhh
Confidence 53 3799999999 555999999999974
No 76
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.82 E-value=8.5e-20 Score=157.18 Aligned_cols=233 Identities=13% Similarity=0.070 Sum_probs=145.3
Q ss_pred CCCccccc---ccccCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh---hcccc-
Q 019805 52 KPWPLIGN---LNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA---GKHAN- 124 (335)
Q Consensus 52 ~~~p~~g~---~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~---~~~~~- 124 (335)
.++|.++- ...+..+|+.++.++++ +|||+++ ++.+.++|++++.+++++.+.. .|+....... .....
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccc
Confidence 34666652 22335688888888865 6999865 4456889999999999997655 4543321111 11111
Q ss_pred cCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccch-HHHHHHHHHHHHHHH
Q 019805 125 YDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHL-KECVFMFNLAIMSRM 203 (335)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~-~~~~~~~~~~vi~~~ 203 (335)
..+..++..+ |++|+++||+++ ++|++++++.+.+.+.+.++++++.+.. .++.+|+ .+....+++++++.+
T Consensus 94 ~~~~~~~~~D-g~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~-----~~~~~D~v~~~~~~~~~~~i~~l 166 (412)
T 4dnj_A 94 RPPSLILEAD-PPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLA-----RGGNIDAIADLAEAYPLSVFPDA 166 (412)
T ss_dssp SCCCTTTTCC-TTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHH-----TTSEEETCCCCCCHHHHHHHHHH
T ss_pred cCCCccccCC-hHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhc-----cCCCceeHHHHHhhhhHhHHHHH
Confidence 1223455555 999999999999 9999999999999999999999999977 3455664 556677888888887
Q ss_pred HhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Q 019805 204 LFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRK 283 (335)
Q Consensus 204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 283 (335)
+|.+....+ .+......+....... ....+...... ..+...+.++.+..
T Consensus 167 -~g~~~~~~~--------~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~--- 216 (412)
T 4dnj_A 167 -MGLKQEGRE--------NLLPYAGLVFNAFGPP--------------NELRQSAIERS----APHQAYVAEQCQRP--- 216 (412)
T ss_dssp -HTCCSTTGG--------GHHHHHHHHHHHTSCS--------------SHHHHHHHHTC----HHHHHHHHHHTSGG---
T ss_pred -cCCchhhhh--------hhhhhhhccccccccc--------------HHHHHHHHHHH----HHHHHHHHHHHHhh---
Confidence 565543332 3333333333322111 01111111222 22233333333322
Q ss_pred ccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805 284 FKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS 334 (335)
Q Consensus 284 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s 334 (335)
.. ..|.+..++....++ ..++++|+.+ ++.++++||+|||++
T Consensus 217 --~~-~~~~~~~l~~~~~~~---~~l~~~e~~~---~~~~l~~AG~eTTa~ 258 (412)
T 4dnj_A 217 --NL-APGGFGACIHAFSDT---GEITPEEAPL---LVRSLLSAGLDTTVN 258 (412)
T ss_dssp --GS-CTTSHHHHHHHTTTT---TSSCTTHHHH---HHHHHHHHSSHHHHH
T ss_pred --cc-ccccchhhhHhhhhc---cchhHHHHHH---HHHHHHhccchhHHH
Confidence 12 234455555554443 3699999999 555999999999974
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.33 E-value=1.3e-09 Score=91.93 Aligned_cols=133 Identities=8% Similarity=-0.032 Sum_probs=86.7
Q ss_pred CCCC-CCCCcccccccc-----cCcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchh--
Q 019805 47 PPPG-PKPWPLIGNLNL-----LGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEIL-- 118 (335)
Q Consensus 47 ~ppg-p~~~p~~g~~~~-----~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-- 118 (335)
.||| ++++|++|+... +..+++.++.+++++ ||++.. .+.+++++++.+++|+.+. .|++++...
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4677 556799997543 356889999998876 999864 4689999999999999873 466543211
Q ss_pred hh----cccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHH-H
Q 019805 119 AG----KHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECV-F 193 (335)
Q Consensus 119 ~~----~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~-~ 193 (335)
.. ......+.++++.+ |+.| + ++|+ . .+.+++.++++++.+. +++|+...+ .
T Consensus 108 ~~~~~~~~~~~~~~~l~~~d-g~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~--------g~~Dl~~~~a~ 164 (381)
T 2yjn_B 108 WMRAAGAPPAEWAQPFRDVH-AASW-------E-GEVP-----D-VGELAESFAGLLPGAG--------ARLDLVGDFAW 164 (381)
T ss_dssp HHHHHTCCHHHHTHHHHHHH-HCCC-------C-SCCC-----C-CSCHHHHTSTTSCC--------------CCCCCCT
T ss_pred cccccccccchhhhhhhhCC-chhh-------h-hccC-----C-hHHHHHHHHHHHHhcc--------CcchHHHHHHH
Confidence 00 00000124677776 9999 5 8888 3 6888888888888774 257887555 6
Q ss_pred HHHHHHHHHHHhccccc
Q 019805 194 MFNLAIMSRMLFGKRYT 210 (335)
Q Consensus 194 ~~~~~vi~~~~fG~~~~ 210 (335)
.++++||+++ ||.+.+
T Consensus 165 ~l~~~vi~~l-~G~~~~ 180 (381)
T 2yjn_B 165 QVPVQGMTAV-LGAAGV 180 (381)
T ss_dssp HHHHHHHHTC------C
T ss_pred HHHHHHHHHH-cCCCHH
Confidence 9999999995 998754
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.93 E-value=4.1 Score=26.20 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=42.9
Q ss_pred ccccccccc-C-cchhHHHHHHHHhhC-CceEEecCCeeEEEeCCHHHHHHHHHh-cCCccCCCC
Q 019805 55 PLIGNLNLL-G-EHLHLSFHSLSQKYG-PLMQLKLGLNIMVVCSSAEVAELFLKT-HDLTFATRP 115 (335)
Q Consensus 55 p~~g~~~~~-~-~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~~p~~~~~i~~~-~~~~~~~~~ 115 (335)
-+++|+..- . ......+.++..+|| +|..+ .+|.-.|...+.+.++..+.. ++..+..|+
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 457888765 2 233445788999995 99888 568889999999999888864 443444444
No 79
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=67.70 E-value=23 Score=23.22 Aligned_cols=58 Identities=24% Similarity=0.252 Sum_probs=40.9
Q ss_pred CCCCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecC------CeeEEEeCCHHHHHHHHHh
Q 019805 47 PPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 47 ~ppgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~~p~~~~~i~~~ 106 (335)
.||.|...-++|++..- -....+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 45555556677887643 2244577888999999888761 3457888899988888873
No 80
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=64.30 E-value=21 Score=21.56 Aligned_cols=51 Identities=20% Similarity=0.218 Sum_probs=35.7
Q ss_pred ccccccccCcc----hhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 56 LIGNLNLLGEH----LHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 56 ~~g~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
++|+++.-..+ ....+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 45665543222 346678888999999888764 3457778899999998864
No 81
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=62.65 E-value=22 Score=22.14 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=36.0
Q ss_pred CCCCCCcccccccccCcchhHHHHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHH
Q 019805 49 PGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG----LNIMVVCSSAEVAELF 103 (335)
Q Consensus 49 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~~p~~~~~i 103 (335)
+-|+..-++|++..- --...+.++..+||+|..+.+. |.-.|...+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~~--~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTED--MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 334445667777653 2245577888999999988764 4567888999988853
No 82
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=55.21 E-value=39 Score=21.75 Aligned_cols=53 Identities=19% Similarity=0.184 Sum_probs=37.0
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHhcC
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG--------LNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~~p~~~~~i~~~~~ 108 (335)
.-++|++..- -....+.++..+||+|..+.+. |.-.|...+++.++.++..++
T Consensus 13 ~lfV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~ 73 (103)
T 1s79_A 13 SVYIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG 73 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSC
T ss_pred EEEEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCC
Confidence 3456666542 2345577888999998887653 345778899999999987443
No 83
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=53.15 E-value=42 Score=21.52 Aligned_cols=53 Identities=19% Similarity=0.177 Sum_probs=38.3
Q ss_pred CcccccccccCcc----hhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEH----LHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..-..+ ....+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 4567887754221 456788899999999888764 3457777888888888875
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=50.36 E-value=35 Score=19.99 Aligned_cols=41 Identities=7% Similarity=0.097 Sum_probs=30.2
Q ss_pred hHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 019805 68 HLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~~ 108 (335)
...+.++..+||+|..+.+. |.-.|...+++.++.++..+.
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 44577888899998887652 234677789999999987543
No 85
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=47.41 E-value=63 Score=21.83 Aligned_cols=53 Identities=23% Similarity=0.328 Sum_probs=36.5
Q ss_pred Cccccccccc-C-cchhHHHHHHHHhhCCceEEecC------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLL-G-EHLHLSFHSLSQKYGPLMQLKLG------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~-~-~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..- . .+....+.++..+||+|..+.+. |.-.|...+++.+...+..
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 3566777643 1 22233466789999999887652 3467888899988888864
No 86
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=47.33 E-value=49 Score=20.60 Aligned_cols=53 Identities=21% Similarity=0.330 Sum_probs=36.8
Q ss_pred Cccccccccc--CcchhHHHHHHHHhhCCceEEecC------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLL--GEHLHLSFHSLSQKYGPLMQLKLG------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..- ..+....+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3466776643 222333445889999999888664 4567888999999988864
No 87
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=45.41 E-value=54 Score=20.51 Aligned_cols=53 Identities=13% Similarity=0.126 Sum_probs=36.1
Q ss_pred Cccccccccc--CcchhHHHHHHHHhhCCceEEecC------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLL--GEHLHLSFHSLSQKYGPLMQLKLG------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~~p~~~~~i~~~ 106 (335)
--++|++..- ..+....+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 11 ~l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 11 DVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 3466777643 223333344889999999888764 3357778899999888874
No 88
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=44.03 E-value=55 Score=21.12 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=30.4
Q ss_pred hHHHHHHHHhhCCceEEecCCe-eEEEeCCHHHHHHHHHh
Q 019805 68 HLSFHSLSQKYGPLMQLKLGLN-IMVVCSSAEVAELFLKT 106 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~~~-~~v~i~~p~~~~~i~~~ 106 (335)
..-+.++.+.||.|.--|+-.. -.+++.+|+.+++++..
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 3446788889998777777554 57888999999999983
No 89
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=43.58 E-value=66 Score=21.03 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=39.6
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC--CeeEEEeCCHHHHHHHHHh-cCCccCC
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG--LNIMVVCSSAEVAELFLKT-HDLTFAT 113 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~i~~p~~~~~i~~~-~~~~~~~ 113 (335)
.-+++++..- --...+.++..+||+|..+.+. +.-.|...+++.++..+.. +...+..
T Consensus 18 ~l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 18 RVVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp CEEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 3456777643 2244567888999999888764 5567888899999888874 3433444
No 90
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=42.37 E-value=76 Score=21.36 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=37.3
Q ss_pred CCCCcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 51 PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 51 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
|...-+++++..- --...+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 45 ~~~~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 45 PNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CSSCBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3334566776643 2244577888999998887662 2346777899999998874
No 91
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.70 E-value=63 Score=19.94 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=36.8
Q ss_pred CCCCcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 51 PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 51 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
|...-+++++..- -....+.++.++||+|..+.+. +.-.|-..+++.++.++..
T Consensus 14 ~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 14 PNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp GGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3334566776643 2244578888999998877652 1246777899999998874
No 92
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.50 E-value=80 Score=21.08 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=36.7
Q ss_pred CCcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHH
Q 019805 53 PWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLK 105 (335)
Q Consensus 53 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~ 105 (335)
..-++|++..- --...+.++..+||.|..+.+. +.-.|-..+.+.+..++.
T Consensus 32 ~~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 32 RVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp SEEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 34567887753 2245578889999998887653 456778889988888876
No 93
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.27 E-value=56 Score=19.70 Aligned_cols=50 Identities=20% Similarity=0.066 Sum_probs=33.7
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHH
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLK 105 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~ 105 (335)
.-++|++..- -....+.++..+||+|..+.+. +.-.|...+++.++.++.
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 4556776543 2234567777889998887642 235677789998888876
No 94
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=39.93 E-value=1.1e+02 Score=22.56 Aligned_cols=57 Identities=5% Similarity=-0.035 Sum_probs=38.0
Q ss_pred ChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCC-CccchHHHHHHH
Q 019805 136 GPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYS-TPVHLKECVFMF 195 (335)
Q Consensus 136 g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~d~~~~~~~~ 195 (335)
...|..++..++ ..|++.++......-..+++.-++.+.+.-. +| ...|+..++..|
T Consensus 110 ~~k~q~~~~~ls-~~~sp~~L~~~L~~a~~e~eeeS~~l~~~F~--~~~~e~dv~~Fl~~y 167 (192)
T 2p22_C 110 VASWQDYHSEFS-KKYGDIALKKKLEQNTKKLDEESSQLETTTR--SIDSADDLDQFIKNY 167 (192)
T ss_dssp HHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHHHSCS--CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCcccchHHHHHHHH
Confidence 455666666777 7789988887777777777777777776543 22 246666666554
No 95
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=39.46 E-value=74 Score=20.40 Aligned_cols=51 Identities=8% Similarity=-0.046 Sum_probs=37.5
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC--CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG--LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- --...+.++..+||+|..+.+. +.-.|...+++.++..+..
T Consensus 17 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCSS--CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 3466777642 2355678888999998887763 5677888999999998875
No 96
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.71 E-value=74 Score=20.16 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=32.6
Q ss_pred CcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcC
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~ 108 (335)
..+....+.+...+||.|..+++ .+.-.|...+.+.+..+..-++
T Consensus 25 d~~l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG 70 (91)
T 2dnr_A 25 DDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNG 70 (91)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTT
T ss_pred CHHHHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCC
Confidence 33445566777888999988886 4456777789998888886555
No 97
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=38.58 E-value=59 Score=18.96 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=29.8
Q ss_pred hHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 019805 68 HLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~~ 108 (335)
...+.++..+||+|..+.+. |.-.|-..+++.++.++..++
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 62 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF 62 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence 44577888999998887652 234677789999999886433
No 98
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.80 E-value=83 Score=20.46 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=38.4
Q ss_pred CCCCcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 019805 51 PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 51 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~~ 106 (335)
|...-++|++..- --...+.++..+||+|..+.+. |.-.|-..+++.++.....
T Consensus 15 ~~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~~ 71 (105)
T 1sjq_A 15 PSRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNY 71 (105)
T ss_dssp CCCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3335667887753 2234577889999999888763 4567888899988888863
No 99
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=37.47 E-value=70 Score=21.12 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=39.8
Q ss_pred CCCCCCCccccccccc--------CcchhHHHHHHHHhhCCceEEecC-----CeeEEEeCCHHHHHHHHHh-cCCccCC
Q 019805 48 PPGPKPWPLIGNLNLL--------GEHLHLSFHSLSQKYGPLMQLKLG-----LNIMVVCSSAEVAELFLKT-HDLTFAT 113 (335)
Q Consensus 48 ppgp~~~p~~g~~~~~--------~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~v~i~~p~~~~~i~~~-~~~~~~~ 113 (335)
+|.|...-.+.|.... ..+...-+.+...+||.|..+.+. |.-.|-..+++.++..... ++..|.+
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 4555545555555443 122334456667789999888752 4456777888888877764 4434444
Q ss_pred C
Q 019805 114 R 114 (335)
Q Consensus 114 ~ 114 (335)
|
T Consensus 83 R 83 (114)
T 3s6e_A 83 K 83 (114)
T ss_dssp E
T ss_pred E
Confidence 3
No 100
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=35.18 E-value=92 Score=20.21 Aligned_cols=51 Identities=18% Similarity=0.099 Sum_probs=36.2
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
--++|++..- --...+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 8 ~lfV~nL~~~--~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLNDN--VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 4556776643 2345677888999998887652 1247888899999998874
No 101
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=35.13 E-value=75 Score=19.19 Aligned_cols=53 Identities=13% Similarity=0.175 Sum_probs=35.9
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~~ 108 (335)
.-++|++..- -....+.++..+||+|..+.+. |.-.|...+++.++.++....
T Consensus 13 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~ 74 (87)
T 3s7r_A 13 KMFVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKE 74 (87)
T ss_dssp EEEEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSC
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCC
Confidence 4566777643 2345577888999998877652 124677789999988886533
No 102
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=33.21 E-value=98 Score=19.94 Aligned_cols=64 Identities=20% Similarity=0.225 Sum_probs=38.2
Q ss_pred CCCCcccccccc---cCcchhHHHHHHHHhhCCceEEecC----------CeeEEEeCCHHHHHHHHHh-cCCccCCC
Q 019805 51 PKPWPLIGNLNL---LGEHLHLSFHSLSQKYGPLMQLKLG----------LNIMVVCSSAEVAELFLKT-HDLTFATR 114 (335)
Q Consensus 51 p~~~p~~g~~~~---~~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~v~i~~p~~~~~i~~~-~~~~~~~~ 114 (335)
|...-++.|+.. +..+...-+.+...+||+|..+++. |.-.|-..+++.+...... ++..|..|
T Consensus 7 ~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp CCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 444455566553 2334556677888899998887652 2235667888888777764 44344433
No 103
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=33.11 E-value=93 Score=19.65 Aligned_cols=50 Identities=22% Similarity=0.068 Sum_probs=34.4
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC-----C----eeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-----L----NIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~----~~~v~i~~p~~~~~i~~~ 106 (335)
-++||+..- --...+.++.++||+|..+.+. + .-.|-..+++.++..+..
T Consensus 22 lfV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 456676643 2245677888999998877652 1 235777899999888864
No 104
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=32.89 E-value=1.3e+02 Score=21.55 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=34.8
Q ss_pred ccccccccCcchhHHHHHHHHhhCCceEEecC-----CeeEEEeCCHHHHHHHHHh
Q 019805 56 LIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-----LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 56 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~v~i~~p~~~~~i~~~ 106 (335)
++||+..- --.+.+.++..+||+|-++++. +.-.|-..+++.++.....
T Consensus 50 ~VgNL~~~--vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFYP--VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCSC--CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 46776532 2245578899999998887763 2457788899888888874
No 105
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.66 E-value=98 Score=19.79 Aligned_cols=39 Identities=28% Similarity=0.363 Sum_probs=31.2
Q ss_pred hHHHHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHHHHh
Q 019805 68 HLSFHSLSQKYGPLMQLKLG----LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~----~~~~v~i~~p~~~~~i~~~ 106 (335)
...+.++..+||+|..+.+. |.-.|...+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 46678899999999888763 3457888899999988876
No 106
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.55 E-value=1e+02 Score=19.84 Aligned_cols=55 Identities=11% Similarity=0.101 Sum_probs=38.5
Q ss_pred CCCCcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 019805 51 PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 51 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~~ 106 (335)
|...-++|++..- .--..-+.++..+||.|..+++. +.-.|-..+++.+..+...
T Consensus 14 p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 14 TRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 4445667887751 12234577888999999888864 3457888899888888763
No 107
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=31.86 E-value=1.1e+02 Score=20.03 Aligned_cols=51 Identities=12% Similarity=-0.053 Sum_probs=37.2
Q ss_pred CcccccccccCcchhHHHHHHHHhhC-CceEEecC-----CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYG-PLMQLKLG-----LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~-----~~~~v~i~~p~~~~~i~~~ 106 (335)
--++|++..- --.+.+.++.++|| .|..+.+. |.-.|-..+++.++..+..
T Consensus 30 ~l~VgnLp~~--~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPEG--CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSCC--CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 4566777643 23456788899999 78777663 4568888999999988865
No 108
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.40 E-value=1e+02 Score=19.36 Aligned_cols=56 Identities=16% Similarity=-0.007 Sum_probs=38.1
Q ss_pred CCCCCCcccccccccCcchhHHHHHHHHh-hCCceEEecC--------CeeEEEeCCHHHHHHHHHh
Q 019805 49 PGPKPWPLIGNLNLLGEHLHLSFHSLSQK-YGPLMQLKLG--------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 49 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~-yG~i~~~~~~--------~~~~v~i~~p~~~~~i~~~ 106 (335)
+.|...-++|++..- --...+.++..+ ||+|..+.+. +.-.|-..+++.++.++..
T Consensus 6 ~~~~~~l~V~nLp~~--~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPD--VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCTT--CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC--CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 334445567777653 224456788888 9998877652 2346777899999999874
No 109
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=30.04 E-value=1e+02 Score=20.97 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=35.4
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecCC-----eeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGL-----NIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~-----~~~v~i~~p~~~~~i~~~ 106 (335)
.-++||+..- --...+.++..+||+|.++.+.. .-.|...+++.++.....
T Consensus 30 ~I~V~NL~~~--vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 30 RIIVENLFYP--VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEEEESCCSC--CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EEEECCCCCC--CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 3457777532 22445788999999988876532 357788898888887764
No 110
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=29.95 E-value=1e+02 Score=19.19 Aligned_cols=51 Identities=12% Similarity=-0.026 Sum_probs=33.9
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceE--------EecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQ--------LKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~--------~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..- --...+.++..+||.|.. +.+. |.-.|...+++.++..+..
T Consensus 15 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~ 82 (99)
T 2la6_A 15 TIFVQGLGEN--VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 82 (99)
T ss_dssp EEEEECCCSS--CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 4566776643 234557788899998865 4331 1346777899999888863
No 111
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.73 E-value=1.1e+02 Score=19.28 Aligned_cols=54 Identities=17% Similarity=-0.020 Sum_probs=36.9
Q ss_pred CCCCcccccccccCcchhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 51 PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 51 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
+...-+++++..- -....+.++..+||+|..+.+. +.-.|...+++.++.++..
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 3445567777643 2234567788899998877654 2346777899999998874
No 112
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=29.12 E-value=1.5e+02 Score=20.82 Aligned_cols=50 Identities=10% Similarity=0.057 Sum_probs=35.1
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
-++|++..- -....+.++..+||+|..+.+. |.-.|...+++.++.++..
T Consensus 75 l~V~nLp~~--~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 456666542 2345678888999998877653 2346777899999888864
No 113
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.92 E-value=1e+02 Score=18.89 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=38.7
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh-cCCccCCC
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT-HDLTFATR 114 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~-~~~~~~~~ 114 (335)
.-+++++..- -....+.++..+||+|..+.+. +.-.|...+++.++.++.. +...+..+
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 75 (95)
T 2dnz_A 7 GLYVGSLHFN--ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGR 75 (95)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCc
Confidence 4456776543 2345577888999998877652 2346778899999998874 33334433
No 114
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=28.65 E-value=1.2e+02 Score=19.48 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=35.2
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..- -....+.++..+||+|..+.+. |.-.|...+++.++.++..
T Consensus 28 ~l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 87 (108)
T 2jrs_A 28 RLYVGSLHFN--ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 87 (108)
T ss_dssp EEEEECCCSS--CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3456776542 2345577888999998777652 2346777899999998863
No 115
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=27.97 E-value=1.3e+02 Score=19.86 Aligned_cols=49 Identities=10% Similarity=0.043 Sum_probs=34.8
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++ . --...+.++..+||+|..+.+. +.-.|...+++.+...+..
T Consensus 41 ~lfVgnl-~---~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 41 TLYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEEECS-S---CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEEcCC-C---CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3456763 2 2345678888999998877664 4467778899988888864
No 116
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=27.57 E-value=52 Score=15.03 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHhhhhhhhccC
Q 019805 308 KLERDQEIILRHRCRIFYLADL 329 (335)
Q Consensus 308 ~l~~~~i~~~~~~~~~~~~AG~ 329 (335)
.+++++|..++.+|+.-++|-.
T Consensus 8 rfdekqieelldncietfvaek 29 (31)
T 4h62_V 8 RFDEKQIEELLDNCIETFVAEK 29 (31)
T ss_dssp --CHHHHHHHHHHHHHHHHTCC
T ss_pred cccHHHHHHHHHHHHHHHHhhc
Confidence 4667776666667878777743
No 117
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.34 E-value=1.2e+02 Score=19.05 Aligned_cols=51 Identities=8% Similarity=0.087 Sum_probs=36.1
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- --...+.++..+||+|..+.+. +.-.|...+++.++.++..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 17 RLHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 4566776643 2244577888999998887653 3457778899999998874
No 118
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=27.14 E-value=1.1e+02 Score=18.94 Aligned_cols=38 Identities=3% Similarity=-0.048 Sum_probs=26.3
Q ss_pred hHHHHHHHHhhCCc---eEEecCCeeEEEeC-----CHHHHHHHHH
Q 019805 68 HLSFHSLSQKYGPL---MQLKLGLNIMVVCS-----SAEVAELFLK 105 (335)
Q Consensus 68 ~~~~~~~~~~yG~i---~~~~~~~~~~v~i~-----~p~~~~~i~~ 105 (335)
.+...+++++|.++ +++..++.+-+-|. |.+.+.++++
T Consensus 23 ~EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLq 68 (81)
T 1ghh_A 23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQ 68 (81)
T ss_dssp HHHHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHH
Confidence 34456888899985 89988887777763 3455555554
No 119
>1ufw_A Synaptojanin 2; RNP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.98 E-value=1.3e+02 Score=19.27 Aligned_cols=45 Identities=16% Similarity=0.261 Sum_probs=30.7
Q ss_pred CcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHhcC
Q 019805 64 GEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 64 ~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~~~ 108 (335)
..+....+.+...+||.|..+++ ..+-.|...+.+.+..++.-++
T Consensus 34 d~~l~~~L~~~F~~~G~Vilvr~v~d~~fVtF~d~~sAl~AI~ldG 79 (95)
T 1ufw_A 34 PEDLRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDG 79 (95)
T ss_dssp CHHHHHHHHHHHHHHSCCSEEEEETTEEEEECSCSHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCcEEEEEcChHHHHHHHhcCC
Confidence 33444556777788998888876 4455666678888777776444
No 120
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=26.17 E-value=1.3e+02 Score=18.98 Aligned_cols=51 Identities=20% Similarity=0.202 Sum_probs=34.2
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~~ 106 (335)
+-++||+..- --...+.++..+||||..+++. |--.|-..+++.++.....
T Consensus 9 wL~VgNL~~~--~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~~ 62 (89)
T 2wbr_A 9 WLLLKNLTAQ--IDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMA 62 (89)
T ss_dssp EEEEECCCTT--CCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred eEEEeCCCcc--CCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHHH
Confidence 4456776543 2245678999999999988753 3456777788666666543
No 121
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.17 E-value=1.2e+02 Score=18.77 Aligned_cols=49 Identities=10% Similarity=0.071 Sum_probs=35.6
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++ .. -...+.++..+||+|..+.++ +.-.|...+++.+...+..
T Consensus 17 ~l~V~n~-~~---t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE-DM---TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS-SC---CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC-CC---CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 4466773 22 245577888999999888764 3457778899999998865
No 122
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=26.16 E-value=1.1e+02 Score=18.31 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=34.3
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
-++|++..- -....+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 9 l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSPE--ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 455666542 2345577888999998877652 1346777899999998874
No 123
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=25.88 E-value=1.4e+02 Score=19.22 Aligned_cols=47 Identities=19% Similarity=0.204 Sum_probs=31.6
Q ss_pred hHHHHHHHHhhCCceEEecC-----------CeeEEEeCCHHHHHHHHHh-cCCccCCC
Q 019805 68 HLSFHSLSQKYGPLMQLKLG-----------LNIMVVCSSAEVAELFLKT-HDLTFATR 114 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~-----------~~~~v~i~~p~~~~~i~~~-~~~~~~~~ 114 (335)
..-+.+...+||+|..+.+. |.-.|-..+++.++..... ++..|..|
T Consensus 29 ~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR 87 (105)
T 3v4m_A 29 VEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 87 (105)
T ss_dssp HHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred HHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCC
Confidence 34566777899999988763 2346777899888877754 34344443
No 124
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=25.24 E-value=1.3e+02 Score=19.75 Aligned_cols=51 Identities=6% Similarity=0.107 Sum_probs=33.9
Q ss_pred ccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcC
Q 019805 56 LIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKTHD 108 (335)
Q Consensus 56 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~~ 108 (335)
++|++..- --...+.++..+||+|..+.+. +.-.|...+++.++..+.-++
T Consensus 40 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g 99 (124)
T 2jwn_A 40 YVGNVDYG--STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDE 99 (124)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCC
Confidence 45555432 2245578888999998777652 234677889999999884333
No 125
>2ahq_A Sigma-54, RNA polymerase sigma factor RPON; sigma-54,sigma factors, solution structure, transcription; NMR {Aquifex aeolicus} PDB: 2o8k_A 2o9l_A
Probab=25.12 E-value=80 Score=19.19 Aligned_cols=24 Identities=4% Similarity=0.094 Sum_probs=14.5
Q ss_pred HHHHHHhccCCCCcCCCCCHHHHHHHH
Q 019805 292 MVDVLLQLADDPTLEVKLERDQEIILR 318 (335)
Q Consensus 292 ~l~~ll~~~~~~~~~~~l~~~~i~~~~ 318 (335)
.+..|++.++.. .+|||+.|.+.+
T Consensus 24 ~Ik~lI~~Ed~~---kPlSD~~I~~~L 47 (76)
T 2ahq_A 24 LIKEIVENEDKR---KPYSDQEIANIL 47 (76)
T ss_dssp HHHHHGGGCCSS---SCCCHHHHHHHH
T ss_pred HHHHHHHhcCCC---CCCCHHHHHHHH
Confidence 455555554432 368888888754
No 126
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=24.75 E-value=42 Score=21.70 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=33.3
Q ss_pred HHHHHHHHhhCCceEEecCCe-eEEEeCCHHHHHHHHHhc--CCccCCCC
Q 019805 69 LSFHSLSQKYGPLMQLKLGLN-IMVVCSSAEVAELFLKTH--DLTFATRP 115 (335)
Q Consensus 69 ~~~~~~~~~yG~i~~~~~~~~-~~v~i~~p~~~~~i~~~~--~~~~~~~~ 115 (335)
.-+.++.+.||.+.--|+... -.+++.+|+.+++++..- ...|.-+.
T Consensus 20 ~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~~~~~y~i~t 69 (101)
T 3ctr_A 20 SDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQT 69 (101)
T ss_dssp HHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHHHTTCSSCCCCC
T ss_pred HHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEEE
Confidence 446778888997777777554 578889999999999842 33344443
No 127
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.71 E-value=1.2e+02 Score=18.36 Aligned_cols=51 Identities=22% Similarity=0.221 Sum_probs=36.5
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..- --...+.++..+||+|..+.+ -+.-.|-..+++.++.++..
T Consensus 10 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 10 KLFIGNLPRE--ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp EEEEESCCSS--CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 4456776643 234557888899999888775 34567788899999988864
No 128
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=24.61 E-value=1.5e+02 Score=19.41 Aligned_cols=58 Identities=10% Similarity=0.140 Sum_probs=39.0
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh-cCCccCCC
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT-HDLTFATR 114 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~-~~~~~~~~ 114 (335)
-+++++..- -....+.++..+||+|..+.+. +.-.|...+++.++.++.. ++..+..+
T Consensus 25 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 92 (126)
T 3ex7_B 25 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 92 (126)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCe
Confidence 455666542 2345577888999999888762 3457888999999999864 44344433
No 129
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.48 E-value=1.3e+02 Score=19.69 Aligned_cols=53 Identities=15% Similarity=0.095 Sum_probs=37.0
Q ss_pred CCCcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHH
Q 019805 52 KPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLK 105 (335)
Q Consensus 52 ~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~ 105 (335)
...-++||+..- .--...+.++..+||+|..+++. +.-.|-..+++.+...+.
T Consensus 25 ~~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 25 GRVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CCEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CCEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 334567777651 02234577888999999888764 346778889988888876
No 130
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=24.40 E-value=1.2e+02 Score=18.05 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=36.0
Q ss_pred CCcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 53 PWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 53 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
..-+++++..- -....+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 8 ~~l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 8 RVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp SEEEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 34566776643 2245677888999999888652 2346778899999988854
No 131
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=24.27 E-value=1.5e+02 Score=19.20 Aligned_cols=50 Identities=18% Similarity=0.119 Sum_probs=35.6
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
-++|++..- --...+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 8 lfV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 466776643 2245678888999998877652 2347888899999998864
No 132
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.20 E-value=1.5e+02 Score=19.11 Aligned_cols=59 Identities=19% Similarity=0.161 Sum_probs=39.3
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHHh-cCCccCCCC
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLKT-HDLTFATRP 115 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~~-~~~~~~~~~ 115 (335)
-+++++..- -....+.++..+||+|..+.+. +.-.|...+++.++..+.. ++..+..++
T Consensus 13 l~V~nLp~~--~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 13 ILAKNLPAG--TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 345665532 2345678889999999888763 3467788899998888864 443444443
No 133
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=24.07 E-value=1.3e+02 Score=18.30 Aligned_cols=51 Identities=18% Similarity=0.072 Sum_probs=35.2
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC-------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- -....+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 10 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 10 QIFVRNLPFD--FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEEECSCCTT--CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 3456676642 2345678888999998877653 2346777899999988874
No 134
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=23.51 E-value=1.4e+02 Score=18.67 Aligned_cols=52 Identities=19% Similarity=0.294 Sum_probs=36.2
Q ss_pred cccccccccC----cchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNLLG----EHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
-++|+++... .-....+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 9 vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 73 (100)
T 3ns6_A 9 IVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKS 73 (100)
T ss_dssp EEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4566666431 22345677888999999888763 3357888899999988864
No 135
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.46 E-value=1.5e+02 Score=18.87 Aligned_cols=50 Identities=12% Similarity=0.056 Sum_probs=36.0
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---CeeEEEeCCHHHHHHHHH
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---LNIMVVCSSAEVAELFLK 105 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~~p~~~~~i~~ 105 (335)
.-++|++..- --...+.++..+||.|..+.+. +.-.|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~~--~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPGE--VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCTT--CCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 4667777642 2244567888999998887653 456788889998888876
No 136
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=23.16 E-value=1.7e+02 Score=21.56 Aligned_cols=55 Identities=18% Similarity=0.139 Sum_probs=37.4
Q ss_pred CCCCcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhc
Q 019805 51 PKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKTH 107 (335)
Q Consensus 51 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~ 107 (335)
|...-++|++..- --...+.++.++||+|..+.+. |.-.|...+++.+...+...
T Consensus 14 p~~tlfVgnLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~~ 77 (213)
T 4f02_A 14 PMASLYVGDLHPD--VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 77 (213)
T ss_dssp -CCEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHHh
Confidence 3334567877643 2245677888999999877642 23477888999999888653
No 137
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.13 E-value=1.4e+02 Score=18.51 Aligned_cols=51 Identities=14% Similarity=0.073 Sum_probs=35.6
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG--------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- -....+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 19 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 4456666643 2244577888999998877653 2346777899999998864
No 138
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.57 E-value=1.5e+02 Score=18.42 Aligned_cols=59 Identities=7% Similarity=0.049 Sum_probs=39.5
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHhcCCccCCC
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKTHDLTFATR 114 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~~~~~~~~~ 114 (335)
.-++|++..- --...+.++..+||+|..+.+. +.-.|...+++.++.++.-+...+..+
T Consensus 12 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 79 (99)
T 2dgs_A 12 KIFVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 79 (99)
T ss_dssp EEEEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSC
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCe
Confidence 3456776643 2244577888999998887662 235677889999999987544344433
No 139
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=22.46 E-value=1.5e+02 Score=18.47 Aligned_cols=50 Identities=18% Similarity=0.220 Sum_probs=35.9
Q ss_pred cccccccc-cCcchhHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNL-LGEHLHLSFHSLSQKYGPLMQLKLG-LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~-~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~~p~~~~~i~~~ 106 (335)
-++|++.. - --...+.++..+||+|..+.+. |.-.|...+++.++.++..
T Consensus 25 l~V~nLp~~~--~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 25 LFIGNLPLKN--VSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEEESCCSSC--CCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCccc--CCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 35677663 2 2245577888999999888763 4567788899999998874
No 140
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.19 E-value=1.4e+02 Score=18.16 Aligned_cols=51 Identities=12% Similarity=0.157 Sum_probs=36.0
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- -....+.++.++||+|..+.+. +.-.|-..+++.++.++..
T Consensus 18 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 18 TVYVSNLPFS--LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp SEEEESCCTT--SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 4566777643 2344577888999998887662 2357788899999998864
No 141
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=22.06 E-value=1.4e+02 Score=18.18 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=35.1
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG--------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- -....+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 18 ~l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (95)
T 2ywk_A 18 TVFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 76 (95)
T ss_dssp EEEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHH
Confidence 3456666543 2245578888999998887653 2346777899999888873
No 142
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.65 E-value=1.6e+02 Score=18.44 Aligned_cols=58 Identities=14% Similarity=0.015 Sum_probs=38.6
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh-cCCccCC
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT-HDLTFAT 113 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~-~~~~~~~ 113 (335)
.-+++++..- --...+.++..+||+|..+.+. +.-.|...+++.++.++.. +...+..
T Consensus 15 ~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 82 (103)
T 2dnm_A 15 TLKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDG 82 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBTT
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 4456776643 2345577888999999888763 2357778888888888874 4433433
No 143
>2ezv_A Type II restriction enzyme SFII; type IIF restriction endonuclease, protein/DNA complex, hydrolase/DNA complex; 2.40A {Synthetic} PDB: 2f03_A*
Probab=21.23 E-value=1.6e+02 Score=21.78 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=32.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHH
Q 019805 155 RLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRM 203 (335)
Q Consensus 155 ~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~ 203 (335)
.|+-....+.+...+..+-+.+..+.++|...|+.+.+.+.++|..+..
T Consensus 20 tLr~vvqAi~dY~k~A~~IF~~e~d~~~~lv~diaEDITreALd~lg~~ 68 (269)
T 2ezv_A 20 TLRTIVQALQQYSKEAKSIFETTAADSSGEVIVLAEDITQYALEVAETY 68 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCSSSCCHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhCCC
Confidence 3444445555555555566666544335678899999999999987644
No 144
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=21.22 E-value=1.5e+02 Score=18.23 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=39.6
Q ss_pred Ccccccccc-cCcchhHHHHHHHHhhCCceEEec-CCeeEEEeCCHHHHHHHHHh-cCCccCC
Q 019805 54 WPLIGNLNL-LGEHLHLSFHSLSQKYGPLMQLKL-GLNIMVVCSSAEVAELFLKT-HDLTFAT 113 (335)
Q Consensus 54 ~p~~g~~~~-~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~~p~~~~~i~~~-~~~~~~~ 113 (335)
.-++|++.. - -....+.++..+||+|..+.+ -+.-.|...+++.++.++.. ++..+..
T Consensus 12 ~l~V~nlp~~~--~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g 72 (96)
T 2kvi_A 12 RLFIGNLPLKN--VSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFG 72 (96)
T ss_dssp EEEEESSTTSC--CCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBT
T ss_pred EEEEeCCCccc--CCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCC
Confidence 345677764 2 224557788899999888776 34567888999999999874 4433433
No 145
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=21.18 E-value=1.6e+02 Score=18.46 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=34.8
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
-++|++..- -....+.++..+||+|..+.+. |.-.|-..+++.++.++..
T Consensus 26 l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 456666542 2345578888999998887652 2346777899999988874
No 146
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=20.99 E-value=1.7e+02 Score=18.46 Aligned_cols=51 Identities=18% Similarity=0.100 Sum_probs=34.8
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC--------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG--------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- -....+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 31 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3456666543 2245577888899998777653 2346777899999988874
No 147
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.83 E-value=1.7e+02 Score=18.54 Aligned_cols=51 Identities=18% Similarity=0.153 Sum_probs=36.5
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC---------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG---------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- --...+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 17 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 17 TVFIRNLSFD--SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 4566777643 2345577888999999887764 2346777899999998875
No 148
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.75 E-value=1.6e+02 Score=18.16 Aligned_cols=51 Identities=22% Similarity=0.148 Sum_probs=35.4
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC------------CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG------------LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------------~~~~v~i~~p~~~~~i~~~ 106 (335)
.-++|++..- -....+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 7 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3456666643 2245577888999998777653 2346777899999999875
No 149
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=20.37 E-value=1.7e+02 Score=18.23 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=29.7
Q ss_pred hHHHHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHHHHh
Q 019805 68 HLSFHSLSQKYGPLMQLKLG----LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 68 ~~~~~~~~~~yG~i~~~~~~----~~~~v~i~~p~~~~~i~~~ 106 (335)
...+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 14 ~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 14 KGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp HHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 45577888999998877652 3457778899999988873
No 150
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=20.37 E-value=1.7e+02 Score=18.33 Aligned_cols=51 Identities=12% Similarity=0.025 Sum_probs=36.8
Q ss_pred CcccccccccCcchhHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHh
Q 019805 54 WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 54 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~~p~~~~~i~~~ 106 (335)
.-+++++..- --...+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 13 ~l~V~nl~~~--~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANT--VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 3456776643 2345577888999999888763 3457788899999998874
No 151
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.32 E-value=1.5e+02 Score=17.87 Aligned_cols=52 Identities=13% Similarity=0.093 Sum_probs=37.2
Q ss_pred CCcccccccccCcchhHHHHHHHHhhCCceEEecC-CeeEEEeCCHHHHHHHHHh
Q 019805 53 PWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG-LNIMVVCSSAEVAELFLKT 106 (335)
Q Consensus 53 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~~p~~~~~i~~~ 106 (335)
..-++|++..- -....+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 10 ~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 10 WKIFVGNVSAA--CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CCEEEESCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 34566777643 2345577888999999888763 3457778899999988874
No 152
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=20.28 E-value=2.7e+02 Score=20.70 Aligned_cols=58 Identities=22% Similarity=0.230 Sum_probs=39.3
Q ss_pred cccccccccCcchhHHHHHHHHhhCCceEEecC----CeeEEEeCCHHHHHHHHHh-cCCccCC
Q 019805 55 PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG----LNIMVVCSSAEVAELFLKT-HDLTFAT 113 (335)
Q Consensus 55 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~~p~~~~~i~~~-~~~~~~~ 113 (335)
-++|++... .--...+.++.++||+|..+.+. +.-.|...+++.++..+.. ++..+..
T Consensus 37 l~V~nLp~~-~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g 99 (229)
T 2adc_A 37 LLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHG 99 (229)
T ss_dssp EEEESCCTT-TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSS
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeECC
Confidence 456777641 11235677888999999888764 4467888999999998863 4433433
Done!