Query 019806
Match_columns 335
No_of_seqs 149 out of 223
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 07:23:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019806.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019806hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m0sa2 d.58.40.1 (A:127-198) 9.8 52 0.0038 23.1 1.4 11 176-186 2-12 (72)
2 d1v8fa_ c.26.1.4 (A:) Pantothe 7.3 49 0.0036 28.4 0.3 9 189-197 49-57 (276)
3 d1o8ba2 d.58.40.1 (A:127-198) 6.4 91 0.0066 21.7 1.4 10 177-186 2-11 (72)
4 d1xjua_ d.2.1.3 (A:) Endolysin 5.7 1.6E+02 0.012 21.9 2.6 25 191-215 130-154 (158)
5 d1ihoa_ c.26.1.4 (A:) Pantothe 5.5 69 0.0051 27.5 0.3 10 189-198 54-63 (282)
6 d1v0ea2 b.108.1.3 (A:761-910) 5.3 86 0.0063 25.3 0.7 33 159-191 6-39 (150)
7 d1e0na_ b.72.1.1 (A:) Hypothet 4.3 1.2E+02 0.0089 18.2 0.8 12 185-196 8-19 (27)
8 d2a84a1 c.26.1.4 (A:3-288) Pan 4.2 76 0.0056 27.3 -0.4 10 189-198 63-72 (286)
9 d1ztwa1 e.8.1.2 (A:24-278) MML 3.9 3E+02 0.022 22.1 3.2 36 188-223 34-71 (255)
10 d1a8ya1 c.47.1.3 (A:3-126) Cal 3.8 3E+02 0.022 19.0 2.8 24 179-202 3-26 (124)
No 1
>d1m0sa2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase (RpiA), lid domain {Haemophilus influenzae [TaxId: 727]}
Probab=9.79 E-value=52 Score=23.06 Aligned_cols=11 Identities=36% Similarity=0.791 Sum_probs=8.2
Q ss_pred CccCCCcccCC
Q 019806 176 ARVPLPLELAE 186 (335)
Q Consensus 176 ~r~pLP~~~~e 186 (335)
.++|||+|...
T Consensus 2 ~kFPlPVEV~p 12 (72)
T d1m0sa2 2 STFPLPVEVIP 12 (72)
T ss_dssp SSSCEEEEECG
T ss_pred CCCCEeEEEcH
Confidence 46889988765
No 2
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Probab=7.29 E-value=49 Score=28.42 Aligned_cols=9 Identities=33% Similarity=0.807 Sum_probs=7.3
Q ss_pred ceeechhhh
Q 019806 189 PIYVNAKQY 197 (335)
Q Consensus 189 PvyVNaKQy 197 (335)
.|||||.||
T Consensus 49 SIFVNP~QF 57 (276)
T d1v8fa_ 49 SVFVNPLQF 57 (276)
T ss_dssp EECCCGGGC
T ss_pred EEEecCccC
Confidence 479999993
No 3
>d1o8ba2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase (RpiA), lid domain {Escherichia coli [TaxId: 562]}
Probab=6.38 E-value=91 Score=21.72 Aligned_cols=10 Identities=40% Similarity=0.929 Sum_probs=7.4
Q ss_pred ccCCCcccCC
Q 019806 177 RVPLPLELAE 186 (335)
Q Consensus 177 r~pLP~~~~e 186 (335)
.+|||+|...
T Consensus 2 ~FPlPvEV~p 11 (72)
T d1o8ba2 2 KFPLPVEVIP 11 (72)
T ss_dssp SSCEEEEECG
T ss_pred CCCcCEEEeh
Confidence 5788887755
No 4
>d1xjua_ d.2.1.3 (A:) Endolysin Lyz {Bacteriophage P1 [TaxId: 10678]}
Probab=5.67 E-value=1.6e+02 Score=21.91 Aligned_cols=25 Identities=20% Similarity=0.161 Sum_probs=18.8
Q ss_pred eechhhhHHHHHHHHHHHHHHHhcc
Q 019806 191 YVNAKQYRAILRRRQYRAKLEAQNK 215 (335)
Q Consensus 191 yVNaKQy~rIlrRR~~Rakle~~~k 215 (335)
|.+-|-..++.+||++.++|=.++.
T Consensus 130 ~~~g~~~~GL~~RR~~E~~L~l~g~ 154 (158)
T d1xjua_ 130 NSNGVPLRGLKIRREKERQLCLTGL 154 (158)
T ss_dssp EETTEECHHHHHHHHHHHHHHHTTT
T ss_pred hcCCEEChhHHHHHHHHHHHHHccc
Confidence 3344557899999999998876664
No 5
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=5.54 E-value=69 Score=27.54 Aligned_cols=10 Identities=40% Similarity=0.770 Sum_probs=7.9
Q ss_pred ceeechhhhH
Q 019806 189 PIYVNAKQYR 198 (335)
Q Consensus 189 PvyVNaKQy~ 198 (335)
.|||||.||.
T Consensus 54 SIFVNP~QF~ 63 (282)
T d1ihoa_ 54 SIFVNPMQFD 63 (282)
T ss_dssp EECCCGGGCS
T ss_pred EEEecCccCc
Confidence 4899998853
No 6
>d1v0ea2 b.108.1.3 (A:761-910) Endo-alpha-sialidase {Bacteriophage K1F [TaxId: 344021]}
Probab=5.30 E-value=86 Score=25.29 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=23.6
Q ss_pred CCCcccccCCcccCCCCCc-cCCCcccCCCCcee
Q 019806 159 LPPQAMIHHPQMMGMAPAR-VPLPLELAEDEPIY 191 (335)
Q Consensus 159 Yg~q~~~~~p~~~G~~~~r-~pLP~~~~e~ePvy 191 (335)
||.-+-..-|.+||..-.| ||.|++..+|--|+
T Consensus 6 YGAtPnr~iP~fm~tdGvR~vpaPl~ft~D~~v~ 39 (150)
T d1v0ea2 6 YGAVPNRAVPVFFDTNGVRTVPAPMEFTGDLGLG 39 (150)
T ss_dssp ECSCCCSSSCCEECTTSCEEECSCEEECSCEEES
T ss_pred ccCCCCcccceEecCCCceecccceEecCCceEE
Confidence 5554445679999988766 89999887764443
No 7
>d1e0na_ b.72.1.1 (A:) Hypothetical protein Yjq8 (Set2p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.32 E-value=1.2e+02 Score=18.18 Aligned_cols=12 Identities=42% Similarity=0.794 Sum_probs=9.2
Q ss_pred CCCCceeechhh
Q 019806 185 AEDEPIYVNAKQ 196 (335)
Q Consensus 185 ~e~ePvyVNaKQ 196 (335)
....|+|-||.+
T Consensus 8 engrpmyynaq~ 19 (27)
T d1e0na_ 8 ENGRPLYYNAEQ 19 (27)
T ss_dssp SSSSEEEEETTT
T ss_pred cCCceeeeehhh
Confidence 356899999864
No 8
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.23 E-value=76 Score=27.27 Aligned_cols=10 Identities=40% Similarity=0.747 Sum_probs=8.0
Q ss_pred ceeechhhhH
Q 019806 189 PIYVNAKQYR 198 (335)
Q Consensus 189 PvyVNaKQy~ 198 (335)
.|||||.||.
T Consensus 63 SIFVNP~QF~ 72 (286)
T d2a84a1 63 SIFVNPMQFG 72 (286)
T ss_dssp EECCCCCCTT
T ss_pred EEeecccccC
Confidence 4799999954
No 9
>d1ztwa1 e.8.1.2 (A:24-278) MMLV reverse transcriptase {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=3.86 E-value=3e+02 Score=22.10 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=21.0
Q ss_pred CceeechhhhHHHHHH--HHHHHHHHHhcccccCCCCc
Q 019806 188 EPIYVNAKQYRAILRR--RQYRAKLEAQNKLVKGRKPY 223 (335)
Q Consensus 188 ePvyVNaKQy~rIlrR--R~~Rakle~~~kl~k~rk~Y 223 (335)
+|+++.+-.+..-.+. |+.-+++.++|.+.....+|
T Consensus 34 ~P~~~~~~~~~~~~~~~l~~~i~~ll~~G~I~p~~s~~ 71 (255)
T d1ztwa1 34 TPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPW 71 (255)
T ss_dssp CCCBCCCCCCCHHHHHHHHHHHHHHHHHTSEEEECCSC
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHhhhceeeecCCCc
Confidence 6766654333433332 45556777788877766665
No 10
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=3.81 E-value=3e+02 Score=19.02 Aligned_cols=24 Identities=33% Similarity=0.493 Sum_probs=17.1
Q ss_pred CCCcccCCCCceeechhhhHHHHH
Q 019806 179 PLPLELAEDEPIYVNAKQYRAILR 202 (335)
Q Consensus 179 pLP~~~~e~ePvyVNaKQy~rIlr 202 (335)
.+|.-...+.-|-+|++.|.++|+
T Consensus 3 ~~p~~d~~~~V~~L~~~nf~~~l~ 26 (124)
T d1a8ya1 3 DFPEYDGVDRVINVNAKNYKNVFK 26 (124)
T ss_dssp CCCCCCCCCCCEECCTTTHHHHHH
T ss_pred CCCccCCCCccEECCHHHHHHHHH
Confidence 445444455678999999998874
Done!