Query 019809
Match_columns 335
No_of_seqs 234 out of 2300
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 07:25:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 100.0 8.2E-57 2.8E-61 438.7 32.9 298 3-329 138-451 (490)
2 3qww_A SET and MYND domain-con 100.0 1.9E-56 6.6E-61 429.8 32.7 291 3-321 140-432 (433)
3 3qwp_A SET and MYND domain-con 100.0 5.8E-56 2E-60 426.9 28.7 287 3-328 136-428 (429)
4 3rq4_A Histone-lysine N-methyl 99.6 4.3E-17 1.5E-21 143.3 3.5 81 40-131 154-236 (247)
5 3s8p_A Histone-lysine N-methyl 99.5 1.7E-15 5.9E-20 134.4 4.3 85 37-131 180-265 (273)
6 3n71_A Histone lysine methyltr 99.4 4.4E-12 1.5E-16 123.3 14.2 112 188-299 352-463 (490)
7 1n3j_A A612L, histone H3 lysin 99.4 2.6E-13 8.8E-18 106.8 4.1 54 55-108 57-112 (119)
8 3edt_B KLC 2, kinesin light ch 99.3 8.7E-11 3E-15 103.2 18.7 141 189-329 45-185 (283)
9 3edt_B KLC 2, kinesin light ch 99.2 1.5E-10 5.1E-15 101.7 14.8 131 198-328 12-142 (283)
10 2w5y_A Histone-lysine N-methyl 99.2 6.8E-12 2.3E-16 106.6 5.1 54 63-125 125-182 (192)
11 3qww_A SET and MYND domain-con 99.2 9.7E-11 3.3E-15 112.1 12.2 88 241-328 310-397 (433)
12 3nf1_A KLC 1, kinesin light ch 99.2 1.7E-09 5.8E-14 96.5 18.4 138 191-328 73-210 (311)
13 3nf1_A KLC 1, kinesin light ch 99.2 1.8E-09 6.1E-14 96.3 17.9 139 189-327 29-167 (311)
14 3f9x_A Histone-lysine N-methyl 99.1 2.3E-11 7.8E-16 101.3 2.9 54 63-116 108-165 (166)
15 3qwp_A SET and MYND domain-con 99.1 3E-10 1E-14 108.7 11.0 93 236-328 294-386 (429)
16 3ope_A Probable histone-lysine 99.0 8E-11 2.7E-15 102.6 3.9 60 58-126 141-205 (222)
17 3smt_A Histone-lysine N-methyl 99.0 1.9E-10 6.5E-15 111.7 6.5 92 27-124 237-329 (497)
18 3ooi_A Histone-lysine N-methyl 99.0 1.9E-10 6.4E-15 100.8 5.5 62 55-126 157-223 (232)
19 3qxy_A N-lysine methyltransfer 99.0 5.7E-10 1.9E-14 107.3 7.0 92 27-124 183-278 (449)
20 3h6l_A Histone-lysine N-methyl 98.9 3.6E-10 1.2E-14 101.4 4.3 60 57-126 184-248 (278)
21 4gcn_A Protein STI-1; structur 98.9 6E-08 2E-12 76.3 16.8 102 190-300 11-112 (127)
22 2xev_A YBGF; tetratricopeptide 98.9 3.9E-08 1.3E-12 76.3 15.3 121 191-326 6-126 (129)
23 3hna_A Histone-lysine N-methyl 98.9 5.9E-10 2E-14 100.5 3.1 64 54-125 207-279 (287)
24 1ml9_A Histone H3 methyltransf 98.9 1.2E-09 4.2E-14 99.4 4.6 63 63-125 221-292 (302)
25 3rkv_A Putative peptidylprolyl 98.8 8.8E-08 3E-12 78.0 15.1 108 185-300 9-126 (162)
26 4gco_A Protein STI-1; structur 98.8 1.3E-07 4.5E-12 74.3 15.3 106 188-314 14-119 (126)
27 2f69_A Histone-lysine N-methyl 98.8 1.8E-09 6.3E-14 96.0 4.4 45 63-107 187-236 (261)
28 3upv_A Heat shock protein STI1 98.8 2.8E-07 9.7E-12 71.4 15.5 121 188-326 5-125 (126)
29 1mvh_A Cryptic LOCI regulator 98.8 4.4E-09 1.5E-13 95.4 5.1 44 63-106 214-265 (299)
30 2hr2_A Hypothetical protein; a 98.7 9.7E-07 3.3E-11 72.3 17.7 139 186-326 10-156 (159)
31 2r3a_A Histone-lysine N-methyl 98.7 7.7E-09 2.6E-13 93.8 5.4 44 62-105 215-266 (300)
32 1h3i_A Histone H3 lysine 4 spe 98.7 6.2E-09 2.1E-13 94.5 4.7 43 63-105 241-288 (293)
33 2qpw_A PR domain zinc finger p 98.7 9.4E-09 3.2E-13 83.6 5.1 45 63-107 100-147 (149)
34 3ro3_A PINS homolog, G-protein 98.7 6E-07 2.1E-11 71.2 15.8 134 188-327 10-143 (164)
35 3gyz_A Chaperone protein IPGC; 98.7 3.2E-07 1.1E-11 74.7 13.7 112 188-320 37-148 (151)
36 3bo5_A Histone-lysine N-methyl 98.7 1.2E-08 4E-13 92.3 5.5 49 59-107 201-255 (290)
37 3ulq_A Response regulator aspa 98.7 4.9E-07 1.7E-11 84.0 16.4 131 193-328 109-239 (383)
38 2vgx_A Chaperone SYCD; alterna 98.7 7.1E-07 2.4E-11 72.0 15.2 120 187-327 21-140 (148)
39 2xcb_A PCRH, regulatory protei 98.7 6.9E-07 2.4E-11 71.1 14.5 120 188-328 19-138 (142)
40 3sz7_A HSC70 cochaperone (SGT) 98.6 2E-06 6.7E-11 70.0 16.2 99 187-301 11-109 (164)
41 3ulq_A Response regulator aspa 98.6 1.5E-06 5.1E-11 80.7 17.3 134 188-326 144-277 (383)
42 2dba_A Smooth muscle cell asso 98.6 1.5E-06 5.1E-11 68.4 14.7 113 189-319 30-142 (148)
43 1elr_A TPR2A-domain of HOP; HO 98.6 4.5E-06 1.6E-10 63.8 16.9 103 189-300 6-108 (131)
44 2h21_A Ribulose-1,5 bisphospha 98.6 4.5E-08 1.5E-12 93.9 6.3 89 27-124 158-257 (440)
45 3u3w_A Transcriptional activat 98.6 2.7E-06 9.3E-11 76.2 17.8 129 194-327 122-250 (293)
46 2fbn_A 70 kDa peptidylprolyl i 98.6 2.4E-06 8.2E-11 71.7 16.2 121 184-319 35-165 (198)
47 3gw4_A Uncharacterized protein 98.6 3.4E-06 1.2E-10 70.2 16.6 113 189-304 28-140 (203)
48 3ro3_A PINS homolog, G-protein 98.5 2.3E-06 7.8E-11 67.8 14.3 111 189-303 51-161 (164)
49 3q15_A PSP28, response regulat 98.5 2.9E-06 1E-10 78.7 17.1 134 188-327 142-275 (378)
50 3q49_B STIP1 homology and U bo 98.5 5.9E-06 2E-10 64.3 16.3 100 189-304 11-110 (137)
51 3u3w_A Transcriptional activat 98.5 2E-06 6.7E-11 77.1 14.9 113 189-304 157-270 (293)
52 2qfc_A PLCR protein; TPR, HTH, 98.5 3.2E-06 1.1E-10 75.7 16.0 129 195-329 123-252 (293)
53 2qfc_A PLCR protein; TPR, HTH, 98.5 3.3E-06 1.1E-10 75.6 15.9 113 188-304 156-270 (293)
54 1elw_A TPR1-domain of HOP; HOP 98.5 5.8E-06 2E-10 61.9 14.9 110 188-318 5-114 (118)
55 3qky_A Outer membrane assembly 98.5 3.3E-06 1.1E-10 74.0 14.9 114 188-316 16-137 (261)
56 1ihg_A Cyclophilin 40; ppiase 98.5 5.1E-06 1.7E-10 77.6 16.6 127 180-319 216-350 (370)
57 3q15_A PSP28, response regulat 98.5 4.4E-06 1.5E-10 77.5 16.0 111 189-304 184-294 (378)
58 1qqe_A Vesicular transport pro 98.5 7.2E-06 2.5E-10 73.5 16.7 127 194-326 44-171 (292)
59 4a1s_A PINS, partner of inscut 98.4 7E-06 2.4E-10 76.2 17.1 133 186-327 47-180 (411)
60 4g1t_A Interferon-induced prot 98.4 5.5E-06 1.9E-10 78.6 16.0 117 193-314 57-176 (472)
61 4gyw_A UDP-N-acetylglucosamine 98.4 2.5E-06 8.7E-11 86.6 14.2 91 193-299 15-105 (723)
62 4ga2_A E3 SUMO-protein ligase 98.4 4E-06 1.4E-10 67.6 12.7 108 191-319 35-143 (150)
63 3k9i_A BH0479 protein; putativ 98.4 2E-06 6.7E-11 66.0 10.3 103 200-320 3-105 (117)
64 3qky_A Outer membrane assembly 98.4 4.4E-06 1.5E-10 73.2 13.9 117 200-331 110-250 (261)
65 3gw4_A Uncharacterized protein 98.4 9E-06 3.1E-10 67.6 15.0 113 189-304 68-180 (203)
66 3sf4_A G-protein-signaling mod 98.4 1.2E-05 4.1E-10 74.0 16.9 136 189-330 229-364 (406)
67 1a17_A Serine/threonine protei 98.4 2.4E-05 8.1E-10 62.6 16.5 108 185-313 11-118 (166)
68 3urz_A Uncharacterized protein 98.4 1.3E-05 4.5E-10 68.0 15.7 106 188-314 5-126 (208)
69 3ro2_A PINS homolog, G-protein 98.4 1.8E-05 6E-10 70.3 17.2 128 189-325 7-135 (338)
70 4a1s_A PINS, partner of inscut 98.4 8.4E-06 2.9E-10 75.7 15.6 132 190-327 226-357 (411)
71 2vyi_A SGTA protein; chaperone 98.4 2.2E-05 7.5E-10 59.7 15.3 105 187-312 12-116 (131)
72 2lni_A Stress-induced-phosphop 98.4 8.8E-06 3E-10 62.5 13.1 97 188-300 17-113 (133)
73 4g1t_A Interferon-induced prot 98.3 2.9E-06 9.8E-11 80.5 11.8 89 229-317 51-140 (472)
74 1p5q_A FKBP52, FK506-binding p 98.3 1E-05 3.4E-10 74.4 14.6 115 186-313 146-267 (336)
75 3sf4_A G-protein-signaling mod 98.3 2E-05 6.8E-10 72.5 16.7 127 190-325 12-139 (406)
76 2yhc_A BAMD, UPF0169 lipoprote 98.3 1.6E-05 5.6E-10 68.2 14.7 119 189-322 6-142 (225)
77 1hz4_A MALT regulatory protein 98.3 2.5E-05 8.4E-10 71.8 16.7 112 191-304 57-168 (373)
78 3ro2_A PINS homolog, G-protein 98.3 1.9E-05 6.6E-10 70.1 15.4 132 191-328 187-318 (338)
79 4eqf_A PEX5-related protein; a 98.3 1E-05 3.5E-10 74.0 13.9 117 190-322 216-336 (365)
80 2ifu_A Gamma-SNAP; membrane fu 98.3 1.8E-05 6.2E-10 71.4 15.3 111 189-304 78-188 (307)
81 2ifu_A Gamma-SNAP; membrane fu 98.3 1.5E-05 5.1E-10 72.0 14.7 126 195-327 44-169 (307)
82 1hxi_A PEX5, peroxisome target 98.3 5.5E-06 1.9E-10 64.2 10.2 94 191-300 21-114 (121)
83 4gyw_A UDP-N-acetylglucosamine 98.3 9.5E-06 3.3E-10 82.4 14.2 104 188-312 44-147 (723)
84 1na0_A Designed protein CTPR3; 98.2 5E-05 1.7E-09 57.1 14.9 103 190-313 12-114 (125)
85 4gcn_A Protein STI-1; structur 98.2 1.2E-05 4E-10 62.9 11.3 90 228-326 7-96 (127)
86 1wao_1 Serine/threonine protei 98.2 5E-06 1.7E-10 80.3 10.6 103 193-316 12-114 (477)
87 1kt0_A FKBP51, 51 kDa FK506-bi 98.2 1.9E-05 6.6E-10 75.7 14.2 107 186-300 267-380 (457)
88 3ieg_A DNAJ homolog subfamily 98.2 6.1E-05 2.1E-09 67.7 16.3 114 191-322 238-352 (359)
89 1hz4_A MALT regulatory protein 98.2 9.7E-05 3.3E-09 67.8 18.0 127 192-324 19-146 (373)
90 2c2l_A CHIP, carboxy terminus 98.2 5E-05 1.7E-09 67.8 15.4 98 189-302 6-103 (281)
91 3vtx_A MAMA; tetratricopeptide 98.2 2.7E-05 9.4E-10 63.9 12.7 91 194-300 80-170 (184)
92 1qqe_A Vesicular transport pro 98.2 6.9E-05 2.4E-09 67.0 16.2 110 188-301 78-188 (292)
93 4ga2_A E3 SUMO-protein ligase 98.2 1.1E-05 3.9E-10 64.9 9.9 93 199-312 9-101 (150)
94 1fch_A Peroxisomal targeting s 98.1 4.8E-05 1.6E-09 69.2 14.7 122 191-328 221-345 (368)
95 4i17_A Hypothetical protein; T 98.1 5.9E-05 2E-09 64.2 13.9 114 189-320 78-224 (228)
96 2pl2_A Hypothetical conserved 98.1 4.5E-05 1.5E-09 65.1 12.8 96 190-301 42-148 (217)
97 2if4_A ATFKBP42; FKBP-like, al 98.1 2.3E-05 7.9E-10 72.0 11.6 123 184-319 176-307 (338)
98 3uq3_A Heat shock protein STI1 98.1 0.00011 3.7E-09 62.9 14.9 114 190-321 142-255 (258)
99 2e2e_A Formate-dependent nitri 98.0 0.0001 3.4E-09 60.2 13.8 116 189-325 46-164 (177)
100 3uq3_A Heat shock protein STI1 98.0 9.5E-05 3.2E-09 63.3 14.0 104 187-300 5-108 (258)
101 2yhc_A BAMD, UPF0169 lipoprote 98.0 0.00022 7.7E-09 60.9 16.2 127 189-330 43-201 (225)
102 2kat_A Uncharacterized protein 98.0 5.2E-05 1.8E-09 57.4 10.8 104 205-326 3-106 (115)
103 2kck_A TPR repeat; tetratricop 98.0 3.5E-05 1.2E-09 57.0 9.7 93 194-300 13-106 (112)
104 2pl2_A Hypothetical conserved 98.0 4.5E-05 1.5E-09 65.1 11.5 103 190-313 8-121 (217)
105 2ho1_A Type 4 fimbrial biogene 98.0 0.0001 3.6E-09 63.3 13.6 91 193-299 43-133 (252)
106 1fch_A Peroxisomal targeting s 98.0 3.1E-05 1.1E-09 70.4 10.6 111 190-308 254-367 (368)
107 2vq2_A PILW, putative fimbrial 98.0 0.00019 6.6E-09 59.9 14.8 93 194-300 49-142 (225)
108 1hh8_A P67PHOX, NCF-2, neutrop 98.0 7E-05 2.4E-09 62.8 11.9 104 190-301 40-151 (213)
109 4gco_A Protein STI-1; structur 98.0 6.3E-05 2.1E-09 58.6 10.5 76 224-312 8-83 (126)
110 2y4t_A DNAJ homolog subfamily 98.0 0.00027 9.3E-09 66.1 16.9 113 191-321 261-374 (450)
111 4i17_A Hypothetical protein; T 97.9 8.3E-05 2.8E-09 63.3 11.8 102 189-310 9-110 (228)
112 1hh8_A P67PHOX, NCF-2, neutrop 97.9 0.00014 4.8E-09 60.9 13.1 94 189-301 8-101 (213)
113 3db5_A PR domain zinc finger p 97.9 8.5E-06 2.9E-10 66.2 5.0 45 62-106 97-144 (151)
114 2ho1_A Type 4 fimbrial biogene 97.9 0.00019 6.4E-09 61.6 14.0 94 193-300 77-170 (252)
115 3u4t_A TPR repeat-containing p 97.9 0.00013 4.4E-09 63.4 12.9 98 190-300 6-103 (272)
116 2fo7_A Synthetic consensus TPR 97.9 0.0003 1E-08 53.2 13.2 91 194-300 8-98 (136)
117 1xnf_A Lipoprotein NLPI; TPR, 97.9 0.00013 4.4E-09 63.3 12.4 102 188-310 44-145 (275)
118 3as5_A MAMA; tetratricopeptide 97.9 0.00029 1E-08 56.7 13.7 92 193-300 48-139 (186)
119 2vq2_A PILW, putative fimbrial 97.9 0.00029 9.8E-09 58.8 13.8 94 193-300 82-176 (225)
120 3hym_B Cell division cycle pro 97.9 0.00012 4E-09 65.2 12.0 100 193-300 165-265 (330)
121 3mkr_A Coatomer subunit epsilo 97.9 0.00012 4.1E-09 65.7 12.0 110 199-329 178-288 (291)
122 4eqf_A PEX5-related protein; a 97.9 4.6E-05 1.6E-09 69.6 9.2 112 190-309 250-365 (365)
123 3ma5_A Tetratricopeptide repea 97.9 9.9E-05 3.4E-09 54.8 9.5 68 229-304 7-74 (100)
124 3ieg_A DNAJ homolog subfamily 97.8 0.00026 8.8E-09 63.5 13.9 97 188-300 4-100 (359)
125 3cv0_A Peroxisome targeting si 97.8 0.00046 1.6E-08 61.2 15.1 121 190-326 175-299 (327)
126 3urz_A Uncharacterized protein 97.8 0.00026 9E-09 59.8 12.8 115 193-326 60-206 (208)
127 2fo7_A Synthetic consensus TPR 97.8 0.00036 1.2E-08 52.8 12.3 92 193-300 41-132 (136)
128 1na3_A Designed protein CTPR2; 97.8 0.00028 9.5E-09 50.3 10.9 72 229-313 9-80 (91)
129 3ep0_A PR domain zinc finger p 97.8 1.9E-05 6.4E-10 65.3 5.0 44 63-106 102-148 (170)
130 3hym_B Cell division cycle pro 97.8 0.00017 5.9E-09 64.1 11.9 113 190-315 196-309 (330)
131 1zu2_A Mitochondrial import re 97.8 0.00016 5.4E-09 59.0 10.2 99 202-321 17-136 (158)
132 2l6j_A TPR repeat-containing p 97.8 0.00023 7.8E-09 52.8 10.5 90 229-331 4-96 (111)
133 2vsy_A XCC0866; transferase, g 97.8 0.00021 7.1E-09 70.0 13.1 95 190-300 26-120 (568)
134 4abn_A Tetratricopeptide repea 97.8 0.00019 6.5E-09 69.0 12.6 94 201-312 193-294 (474)
135 3vtx_A MAMA; tetratricopeptide 97.8 0.0004 1.4E-08 56.7 12.9 121 192-329 10-157 (184)
136 3as5_A MAMA; tetratricopeptide 97.8 0.00019 6.5E-09 57.8 10.5 95 190-300 11-105 (186)
137 2q7f_A YRRB protein; TPR, prot 97.8 0.00052 1.8E-08 58.1 13.8 92 193-300 97-188 (243)
138 2q7f_A YRRB protein; TPR, prot 97.8 0.00028 9.6E-09 59.9 12.0 109 191-320 129-237 (243)
139 1xnf_A Lipoprotein NLPI; TPR, 97.8 0.00012 4E-09 63.6 9.7 90 199-300 17-106 (275)
140 1w3b_A UDP-N-acetylglucosamine 97.7 0.00027 9.2E-09 65.1 12.6 86 198-299 282-367 (388)
141 2xev_A YBGF; tetratricopeptide 97.7 0.00021 7.1E-09 54.6 9.9 86 232-327 5-90 (129)
142 4b4t_Q 26S proteasome regulato 97.7 0.00045 1.5E-08 64.4 13.8 131 189-325 57-187 (434)
143 3qou_A Protein YBBN; thioredox 97.7 0.00066 2.3E-08 60.5 14.2 104 188-300 118-248 (287)
144 2gw1_A Mitochondrial precursor 97.7 0.00045 1.6E-08 65.5 13.2 99 186-301 5-103 (514)
145 3cv0_A Peroxisome targeting si 97.7 0.00026 8.8E-09 62.8 10.7 112 190-309 209-324 (327)
146 1w3b_A UDP-N-acetylglucosamine 97.6 0.00039 1.3E-08 63.9 12.1 87 197-299 111-197 (388)
147 4b4t_Q 26S proteasome regulato 97.6 0.00098 3.4E-08 62.1 14.7 116 192-310 140-255 (434)
148 4abn_A Tetratricopeptide repea 97.6 0.00032 1.1E-08 67.4 11.5 95 189-300 139-250 (474)
149 2y4t_A DNAJ homolog subfamily 97.6 0.0013 4.4E-08 61.4 15.3 103 189-300 213-324 (450)
150 3u4t_A TPR repeat-containing p 97.6 0.00028 9.6E-09 61.2 10.0 95 193-300 43-137 (272)
151 2xpi_A Anaphase-promoting comp 97.6 0.001 3.5E-08 64.6 14.7 112 191-317 479-591 (597)
152 3gyz_A Chaperone protein IPGC; 97.6 0.00033 1.1E-08 56.6 9.2 75 225-312 32-106 (151)
153 1elr_A TPR2A-domain of HOP; HO 97.6 0.00079 2.7E-08 50.8 11.0 89 229-326 4-92 (131)
154 3upv_A Heat shock protein STI1 97.6 0.00059 2E-08 52.1 10.3 64 229-300 4-67 (126)
155 3rkv_A Putative peptidylprolyl 97.5 0.00049 1.7E-08 55.3 9.9 73 228-300 10-92 (162)
156 3dal_A PR domain zinc finger p 97.5 7.2E-05 2.5E-09 63.1 4.6 43 63-105 132-177 (196)
157 2r5s_A Uncharacterized protein 97.5 0.00026 8.8E-09 58.0 7.9 103 190-300 9-137 (176)
158 1wao_1 Serine/threonine protei 97.5 5E-05 1.7E-09 73.3 4.0 107 189-311 42-161 (477)
159 2xpi_A Anaphase-promoting comp 97.5 0.0018 6E-08 63.0 15.1 102 198-314 452-554 (597)
160 2h6f_A Protein farnesyltransfe 97.5 0.00055 1.9E-08 64.0 11.0 87 197-299 107-194 (382)
161 3sz7_A HSC70 cochaperone (SGT) 97.5 0.00081 2.8E-08 54.1 10.6 68 225-300 7-74 (164)
162 2hr2_A Hypothetical protein; a 97.5 0.0013 4.4E-08 53.6 11.3 74 230-304 12-90 (159)
163 2l6j_A TPR repeat-containing p 97.5 0.00011 3.8E-09 54.5 4.7 94 189-294 6-101 (111)
164 2e2e_A Formate-dependent nitri 97.4 0.00055 1.9E-08 55.7 8.4 95 197-312 20-117 (177)
165 2vgx_A Chaperone SYCD; alterna 97.4 0.0018 6E-08 51.6 11.3 76 225-313 17-92 (148)
166 2gw1_A Mitochondrial precursor 97.4 0.0028 9.5E-08 60.0 14.4 116 191-321 376-494 (514)
167 2h6f_A Protein farnesyltransfe 97.4 0.0005 1.7E-08 64.3 9.0 94 191-300 135-229 (382)
168 2xcb_A PCRH, regulatory protei 97.4 0.002 6.9E-08 50.5 11.3 76 225-313 14-89 (142)
169 2vsy_A XCC0866; transferase, g 97.4 0.0017 5.7E-08 63.5 12.8 97 190-302 60-159 (568)
170 1a17_A Serine/threonine protei 97.4 0.003 1E-07 49.9 12.2 100 190-303 50-149 (166)
171 2lni_A Stress-induced-phosphop 97.4 0.001 3.5E-08 50.5 9.0 71 222-300 9-79 (133)
172 3mkr_A Coatomer subunit epsilo 97.3 0.0029 9.8E-08 56.5 13.3 102 192-312 135-236 (291)
173 2kc7_A BFR218_protein; tetratr 97.3 0.0016 5.5E-08 47.3 9.6 67 234-313 5-72 (99)
174 3ihx_A PR domain zinc finger p 97.3 0.00015 5.2E-09 58.7 3.9 43 63-105 97-142 (152)
175 3fp2_A TPR repeat-containing p 97.3 0.002 6.8E-08 61.5 12.4 94 186-295 24-117 (537)
176 2v5f_A Prolyl 4-hydroxylase su 97.3 0.0048 1.6E-07 46.0 11.8 77 232-314 8-84 (104)
177 2dba_A Smooth muscle cell asso 97.3 0.0016 5.5E-08 50.5 9.5 67 229-300 28-94 (148)
178 3q49_B STIP1 homology and U bo 97.2 0.0017 5.7E-08 50.0 9.3 64 229-300 9-72 (137)
179 1p5q_A FKBP52, FK506-binding p 97.2 0.0022 7.5E-08 58.6 11.4 101 188-304 197-298 (336)
180 1ouv_A Conserved hypothetical 97.2 0.0043 1.5E-07 54.0 12.6 81 200-300 55-143 (273)
181 3fp2_A TPR repeat-containing p 97.2 0.003 1E-07 60.2 12.3 93 192-300 281-373 (537)
182 1na3_A Designed protein CTPR2; 97.2 0.0053 1.8E-07 43.3 10.7 80 190-285 12-91 (91)
183 2vyi_A SGTA protein; chaperone 97.2 0.0033 1.1E-07 47.1 10.1 66 227-300 10-75 (131)
184 2pzi_A Probable serine/threoni 97.1 0.0011 3.6E-08 66.8 9.0 93 190-299 436-528 (681)
185 1elw_A TPR1-domain of HOP; HOP 97.1 0.004 1.4E-07 45.8 10.0 70 229-311 4-73 (118)
186 2pzi_A Probable serine/threoni 97.1 0.001 3.6E-08 66.9 8.4 92 198-300 402-496 (681)
187 1hxi_A PEX5, peroxisome target 97.1 0.0047 1.6E-07 47.3 10.3 69 232-313 20-88 (121)
188 3ray_A PR domain-containing pr 97.1 0.00042 1.4E-08 59.8 4.6 44 63-106 141-187 (237)
189 1na0_A Designed protein CTPR3; 97.1 0.0047 1.6E-07 45.8 10.1 64 229-300 9-72 (125)
190 2kck_A TPR repeat; tetratricop 97.1 0.00056 1.9E-08 50.2 4.6 61 232-300 9-69 (112)
191 1ouv_A Conserved hypothetical 96.9 0.011 3.9E-07 51.2 12.3 91 190-300 77-179 (273)
192 1ihg_A Cyclophilin 40; ppiase 96.9 0.0048 1.6E-07 57.3 9.9 72 229-300 223-302 (370)
193 3k9i_A BH0479 protein; putativ 96.8 0.0015 5.1E-08 49.5 5.4 62 241-312 2-63 (117)
194 4f3v_A ESX-1 secretion system 96.8 0.013 4.4E-07 52.3 12.3 89 194-298 109-198 (282)
195 4f3v_A ESX-1 secretion system 96.8 0.017 6E-07 51.4 12.9 97 191-300 139-237 (282)
196 2c2l_A CHIP, carboxy terminus 96.8 0.0038 1.3E-07 55.3 8.6 69 230-311 5-73 (281)
197 2fbn_A 70 kDa peptidylprolyl i 96.8 0.0074 2.5E-07 49.9 9.9 71 229-300 38-117 (198)
198 3qou_A Protein YBBN; thioredox 96.7 0.0065 2.2E-07 53.9 9.2 67 229-301 219-285 (287)
199 1pc2_A Mitochondria fission pr 96.6 0.035 1.2E-06 44.6 12.2 85 228-324 31-119 (152)
200 2r5s_A Uncharacterized protein 96.6 0.01 3.5E-07 48.1 9.0 82 206-301 93-174 (176)
201 3rjv_A Putative SEL1 repeat pr 96.5 0.013 4.4E-07 49.4 9.2 63 231-299 87-157 (212)
202 2kc7_A BFR218_protein; tetratr 96.4 0.01 3.5E-07 42.8 7.0 60 192-258 5-64 (99)
203 1kt0_A FKBP51, 51 kDa FK506-bi 96.3 0.017 5.7E-07 55.0 9.8 89 189-293 319-407 (457)
204 3rjv_A Putative SEL1 repeat pr 96.2 0.055 1.9E-06 45.4 11.5 86 200-300 102-197 (212)
205 3ma5_A Tetratricopeptide repea 96.2 0.028 9.6E-07 41.1 8.5 63 190-260 10-72 (100)
206 2ond_A Cleavage stimulation fa 96.2 0.052 1.8E-06 48.2 11.9 83 204-300 81-163 (308)
207 1klx_A Cysteine rich protein B 95.9 0.11 3.7E-06 40.5 11.6 83 198-300 36-126 (138)
208 3bee_A Putative YFRE protein; 95.8 0.066 2.3E-06 39.0 9.1 80 232-324 9-91 (93)
209 3ffl_A Anaphase-promoting comp 95.8 0.21 7.3E-06 40.5 12.6 105 191-295 24-146 (167)
210 2ff4_A Probable regulatory pro 95.8 0.21 7.1E-06 46.5 14.5 124 188-319 116-254 (388)
211 2ond_A Cleavage stimulation fa 95.7 0.088 3E-06 46.7 11.3 96 198-300 110-232 (308)
212 2if4_A ATFKBP42; FKBP-like, al 95.5 0.022 7.4E-07 51.9 6.8 94 190-299 233-327 (338)
213 2kat_A Uncharacterized protein 95.0 0.14 4.9E-06 37.7 8.9 63 190-260 22-84 (115)
214 3txn_A 26S proteasome regulato 94.9 0.62 2.1E-05 43.4 14.6 106 193-302 105-212 (394)
215 3mv2_B Coatomer subunit epsilo 94.8 0.45 1.6E-05 42.8 12.9 109 202-329 193-306 (310)
216 2xm6_A Protein corresponding t 94.8 0.3 1E-05 46.2 12.5 47 200-256 56-106 (490)
217 2v5f_A Prolyl 4-hydroxylase su 94.7 0.86 2.9E-05 33.3 12.5 74 191-270 9-82 (104)
218 2xm6_A Protein corresponding t 94.4 0.38 1.3E-05 45.5 12.3 48 200-257 92-143 (490)
219 2ooe_A Cleavage stimulation fa 93.8 1.3 4.4E-05 42.3 14.8 53 198-257 332-384 (530)
220 1klx_A Cysteine rich protein B 93.6 0.28 9.6E-06 38.1 7.9 77 202-300 10-90 (138)
221 1xi4_A Clathrin heavy chain; a 92.8 0.42 1.4E-05 51.5 10.0 95 190-300 1198-1309(1630)
222 3ffl_A Anaphase-promoting comp 92.7 1.3 4.3E-05 35.9 10.6 95 237-332 28-141 (167)
223 1zu2_A Mitochondrial import re 92.6 0.25 8.6E-06 39.9 6.4 48 203-258 62-120 (158)
224 2ooe_A Cleavage stimulation fa 92.4 0.82 2.8E-05 43.7 11.0 87 200-300 292-385 (530)
225 1xi4_A Clathrin heavy chain; a 92.3 0.84 2.9E-05 49.3 11.5 87 195-297 1113-1221(1630)
226 1b89_A Protein (clathrin heavy 92.0 0.12 4.1E-06 49.0 4.3 32 266-300 205-236 (449)
227 1nzn_A CGI-135 protein, fissio 91.8 2.9 9.9E-05 32.2 11.3 86 228-322 34-120 (126)
228 1pc2_A Mitochondria fission pr 91.7 0.91 3.1E-05 36.3 8.6 64 188-258 33-100 (152)
229 3e4b_A ALGK; tetratricopeptide 91.4 0.82 2.8E-05 43.0 9.5 78 202-298 194-278 (452)
230 2o8p_A 14-3-3 domain containin 91.1 2.3 7.8E-05 36.2 10.9 62 242-303 138-200 (227)
231 3bee_A Putative YFRE protein; 91.1 1.1 3.6E-05 32.4 7.8 63 203-278 25-87 (93)
232 4b4t_R RPN7, 26S proteasome re 90.9 2.1 7.2E-05 40.1 11.7 101 192-300 136-237 (429)
233 3e4b_A ALGK; tetratricopeptide 90.5 1.7 5.8E-05 40.8 10.8 78 200-299 264-350 (452)
234 3uzd_A 14-3-3 protein gamma; s 89.8 2.5 8.5E-05 36.5 10.2 77 246-324 148-228 (248)
235 2br9_A 14-3-3E, 14-3-3 protein 89.0 3.2 0.00011 35.6 10.2 76 246-324 147-227 (234)
236 3ly7_A Transcriptional activat 88.7 1.6 5.5E-05 40.2 8.7 60 232-300 280-339 (372)
237 3u64_A Protein TP_0956; tetrat 88.3 2.3 7.8E-05 37.8 9.0 97 204-314 180-282 (301)
238 1o9d_A 14-3-3-like protein C; 87.9 3.9 0.00013 35.6 10.1 54 246-299 152-206 (260)
239 2wpv_A GET4, UPF0363 protein Y 87.4 14 0.00048 33.0 13.8 122 192-318 18-142 (312)
240 4h7y_A Dual specificity protei 87.0 10 0.00035 30.2 11.5 85 204-299 36-122 (161)
241 3ubw_A 14-3-3E, 14-3-3 protein 86.9 5.2 0.00018 34.8 10.2 77 246-325 173-254 (261)
242 4g26_A Pentatricopeptide repea 86.7 7.3 0.00025 37.2 12.5 90 195-298 113-202 (501)
243 3iqu_A 14-3-3 protein sigma; s 86.6 7.3 0.00025 33.3 10.9 77 246-324 150-230 (236)
244 4b4t_P 26S proteasome regulato 86.1 16 0.00056 34.2 14.4 101 197-302 147-249 (445)
245 1nzn_A CGI-135 protein, fissio 85.9 6.5 0.00022 30.2 9.4 62 189-257 37-102 (126)
246 3o48_A Mitochondria fission 1 84.6 12 0.00042 28.9 10.9 81 229-322 40-124 (134)
247 2npm_A 14-3-3 domain containin 84.3 5.9 0.0002 34.4 9.4 77 246-325 173-253 (260)
248 1dce_A Protein (RAB geranylger 83.6 11 0.00038 36.6 12.3 87 198-300 39-138 (567)
249 1y8m_A FIS1; mitochondria, unk 82.9 13 0.00045 29.1 10.0 82 228-322 38-123 (144)
250 3mv2_B Coatomer subunit epsilo 82.2 5.4 0.00019 35.7 8.7 62 233-300 104-165 (310)
251 3dra_A Protein farnesyltransfe 81.6 14 0.00049 32.7 11.3 88 202-301 48-140 (306)
252 3efz_A 14-3-3 protein; 14-3-3, 81.4 9.5 0.00032 33.2 9.5 55 246-300 169-226 (268)
253 2v6y_A AAA family ATPase, P60 80.5 8.1 0.00028 27.2 7.4 53 270-322 10-64 (83)
254 3txn_A 26S proteasome regulato 79.7 38 0.0013 31.2 17.0 80 231-314 101-180 (394)
255 3spa_A Mtrpol, DNA-directed RN 78.7 24 0.00083 36.9 13.0 94 192-296 132-226 (1134)
256 1b89_A Protein (clathrin heavy 78.5 0.96 3.3E-05 42.8 2.5 54 231-300 124-177 (449)
257 3mkq_A Coatomer beta'-subunit; 78.4 13 0.00044 36.9 11.0 90 231-321 683-791 (814)
258 2w2u_A Hypothetical P60 katani 77.7 10 0.00036 26.7 7.2 51 272-322 20-72 (83)
259 4g26_A Pentatricopeptide repea 77.4 32 0.0011 32.7 13.0 82 203-298 86-167 (501)
260 1dce_A Protein (RAB geranylger 77.3 8.3 0.00028 37.4 8.9 83 202-300 124-221 (567)
261 4b4t_S RPN3, 26S proteasome re 77.0 7.1 0.00024 37.5 8.0 77 217-299 219-298 (523)
262 1wfd_A Hypothetical protein 15 75.7 19 0.00063 25.9 8.3 36 184-219 12-47 (93)
263 3mkq_B Coatomer subunit alpha; 75.4 11 0.00036 30.8 7.7 98 198-308 16-131 (177)
264 3re2_A Predicted protein; meni 73.9 53 0.0018 30.0 12.9 73 247-322 275-349 (472)
265 1ya0_A SMG-7 transcript varian 73.6 7.4 0.00025 37.3 7.3 62 230-299 153-214 (497)
266 4gq4_A Menin; tumor suppressor 73.1 60 0.002 30.2 14.1 74 247-323 282-357 (489)
267 1y8m_A FIS1; mitochondria, unk 73.0 10 0.00035 29.7 6.7 62 189-257 41-105 (144)
268 3o48_A Mitochondria fission 1 72.6 11 0.00038 29.2 6.7 62 189-257 42-106 (134)
269 4e6h_A MRNA 3'-END-processing 70.8 55 0.0019 32.5 13.1 94 199-300 355-463 (679)
270 1pft_A TFIIB, PFTFIIBN; N-term 70.5 2.6 8.9E-05 26.5 2.3 31 145-177 5-36 (50)
271 2ff4_A Probable regulatory pro 70.1 41 0.0014 30.7 11.4 73 192-272 176-249 (388)
272 3u84_A Menin; MLL, JUND, ledgf 70.1 54 0.0018 30.5 11.5 73 247-322 297-371 (550)
273 3dra_A Protein farnesyltransfe 69.2 31 0.0011 30.5 10.0 91 197-300 77-175 (306)
274 1vq8_Z 50S ribosomal protein L 67.9 1.1 3.9E-05 31.7 0.1 29 145-175 27-55 (83)
275 3dss_A Geranylgeranyl transfer 66.8 71 0.0024 28.5 12.3 63 190-257 32-102 (331)
276 4a5x_A MITD1, MIT domain-conta 66.7 19 0.00065 25.4 6.5 44 271-314 16-60 (86)
277 1dl6_A Transcription factor II 66.5 2.6 8.9E-05 27.6 1.7 35 140-176 6-41 (58)
278 3q7a_A Farnesyltransferase alp 65.9 64 0.0022 29.1 11.5 83 201-299 68-153 (349)
279 3ly7_A Transcriptional activat 64.7 39 0.0013 30.9 9.7 33 268-300 274-306 (372)
280 2cpt_A SKD1 protein, vacuolar 64.2 34 0.0012 25.7 7.8 44 270-313 17-62 (117)
281 1wfd_A Hypothetical protein 15 62.6 36 0.0012 24.3 7.5 36 270-305 14-49 (93)
282 3spa_A Mtrpol, DNA-directed RN 60.4 45 0.0015 35.0 10.2 68 226-297 124-191 (1134)
283 2v6x_A Vacuolar protein sortin 60.4 34 0.0011 23.9 6.8 36 269-304 11-46 (85)
284 2br9_A 14-3-3E, 14-3-3 protein 59.3 28 0.00095 29.7 7.3 54 204-257 147-201 (234)
285 2crb_A Nuclear receptor bindin 58.1 24 0.00081 25.4 5.5 43 266-308 9-52 (97)
286 2yrc_A Protein transport prote 57.4 4 0.00014 26.8 1.3 31 145-175 9-43 (59)
287 2o8p_A 14-3-3 domain containin 56.8 46 0.0016 28.1 8.1 70 249-319 98-173 (227)
288 3u64_A Protein TP_0956; tetrat 56.1 21 0.00072 31.6 6.1 52 245-302 179-235 (301)
289 3iqu_A 14-3-3 protein sigma; s 55.5 36 0.0012 29.0 7.3 54 204-257 150-204 (236)
290 3uzd_A 14-3-3 protein gamma; s 55.4 35 0.0012 29.3 7.3 55 204-258 148-203 (248)
291 3ubw_A 14-3-3E, 14-3-3 protein 54.5 37 0.0013 29.4 7.3 55 204-258 173-228 (261)
292 3o10_A Sacsin; all-helical dom 53.4 75 0.0026 24.4 9.4 38 175-212 4-41 (141)
293 2npm_A 14-3-3 domain containin 53.0 43 0.0015 29.0 7.5 53 204-257 173-226 (260)
294 1o9d_A 14-3-3-like protein C; 52.5 41 0.0014 29.1 7.3 54 204-257 152-206 (260)
295 4e6h_A MRNA 3'-END-processing 52.5 1.2E+02 0.0042 29.9 11.8 96 198-300 389-499 (679)
296 2xze_A STAM-binding protein; h 49.5 27 0.00091 27.4 5.2 42 270-312 39-80 (146)
297 2rpa_A Katanin P60 ATPase-cont 49.0 31 0.001 24.0 4.8 51 274-327 15-66 (78)
298 3dss_A Geranylgeranyl transfer 47.7 69 0.0024 28.6 8.4 82 202-299 125-221 (331)
299 2cpt_A SKD1 protein, vacuolar 47.2 86 0.0029 23.4 8.2 38 184-221 15-52 (117)
300 1om2_A Protein (mitochondrial 46.8 36 0.0012 24.6 5.1 50 275-326 24-83 (95)
301 3lpz_A GET4 (YOR164C homolog); 46.8 1.6E+02 0.0055 26.4 16.6 117 196-318 21-144 (336)
302 4b4t_O 26S proteasome regulato 46.3 1.7E+02 0.0059 26.6 12.2 94 199-293 88-191 (393)
303 2dl1_A Spartin; SPG20, MIT, st 45.8 92 0.0031 23.3 8.3 44 244-303 18-61 (116)
304 3mkq_B Coatomer subunit alpha; 44.1 35 0.0012 27.6 5.2 49 238-299 14-62 (177)
305 4gns_B Protein CSD3, chitin bi 43.9 82 0.0028 31.7 8.9 51 193-251 343-393 (754)
306 2v6y_A AAA family ATPase, P60 43.9 39 0.0013 23.5 4.8 37 183-219 7-43 (83)
307 3t5v_B Nuclear mRNA export pro 43.1 2.1E+02 0.0073 26.7 11.4 73 227-301 174-250 (455)
308 1zbp_A Hypothetical protein VP 43.0 1.7E+02 0.0057 25.4 10.2 51 196-254 6-56 (273)
309 3kae_A CDC27, possible protein 42.2 1.4E+02 0.0048 24.4 11.0 76 221-300 56-143 (242)
310 4b4t_P 26S proteasome regulato 42.2 1.7E+02 0.0058 27.1 10.5 70 228-300 136-206 (445)
311 1gh9_A 8.3 kDa protein (gene M 41.7 5 0.00017 27.5 -0.2 50 145-212 4-53 (71)
312 3efz_A 14-3-3 protein; 14-3-3, 41.4 55 0.0019 28.4 6.3 55 204-258 169-226 (268)
313 1vdy_A Hypothetical protein (R 41.2 53 0.0018 25.5 5.6 23 259-281 17-39 (140)
314 4gns_B Protein CSD3, chitin bi 41.2 88 0.003 31.5 8.7 52 236-295 344-395 (754)
315 2ijq_A Hypothetical protein; s 40.7 1.3E+02 0.0046 23.8 8.6 64 239-306 42-110 (161)
316 4b4t_R RPN7, 26S proteasome re 39.3 56 0.0019 30.2 6.6 69 230-303 132-200 (429)
317 2pk7_A Uncharacterized protein 38.6 18 0.00061 24.5 2.2 34 141-176 4-37 (69)
318 2jmo_A Parkin; IBR, E3 ligase, 37.2 24 0.00081 24.5 2.8 29 145-173 25-58 (80)
319 3r9m_A BRO1 domain-containing 37.1 2.4E+02 0.0081 25.5 12.8 35 270-304 252-286 (376)
320 3jyw_9 60S ribosomal protein L 36.3 24 0.00082 24.1 2.5 29 145-175 26-54 (72)
321 3k1s_A PTS system, cellobiose- 36.2 1.3E+02 0.0044 22.2 10.2 70 186-262 21-105 (109)
322 1wvo_A Sialic acid synthase; a 36.1 14 0.00049 25.6 1.5 18 84-101 8-25 (79)
323 2jny_A Uncharacterized BCR; st 34.8 21 0.00071 24.0 2.0 34 141-176 6-39 (67)
324 3myv_A SUSD superfamily protei 33.8 93 0.0032 28.9 7.2 35 225-259 186-220 (454)
325 4b4t_O 26S proteasome regulato 33.6 2.7E+02 0.0093 25.2 11.9 72 237-308 84-164 (393)
326 3mzk_B Protein transport prote 33.2 2.9E+02 0.0099 25.7 10.3 60 268-328 353-412 (441)
327 2w2u_A Hypothetical P60 katani 33.1 1.2E+02 0.0042 21.0 8.5 37 183-219 15-51 (83)
328 2cwy_A Hypothetical protein TT 32.6 70 0.0024 22.8 4.8 77 239-323 11-89 (94)
329 3kez_A Putative sugar binding 32.4 98 0.0033 28.8 7.1 34 225-258 192-225 (461)
330 1wcr_A PTS system, N, N'-diace 32.3 1.4E+02 0.005 21.6 10.0 70 186-262 17-101 (103)
331 2a9u_A Ubiquitin carboxyl-term 31.7 1.3E+02 0.0046 23.3 6.6 42 270-313 41-82 (144)
332 2e2a_A Protein (enzyme IIA); h 31.3 1.5E+02 0.0052 21.6 10.2 70 186-262 19-103 (105)
333 2rpa_A Katanin P60 ATPase-cont 31.0 43 0.0015 23.2 3.2 33 234-266 17-49 (78)
334 3j20_Y 30S ribosomal protein S 30.8 18 0.0006 22.8 1.1 25 147-174 21-46 (50)
335 2jr6_A UPF0434 protein NMA0874 30.3 20 0.0007 24.1 1.4 33 142-176 5-37 (68)
336 2js4_A UPF0434 protein BB2007; 30.2 22 0.00074 24.2 1.5 33 142-176 5-37 (70)
337 3eab_A Spastin; spastin, MIT, 30.1 88 0.003 22.2 4.8 71 243-326 11-81 (89)
338 2wb7_A PT26-6P; extra chromoso 30.1 1.9E+02 0.0065 27.4 8.3 38 246-283 449-486 (526)
339 1l1o_C Replication protein A 7 29.5 20 0.00068 29.2 1.5 27 147-174 45-71 (181)
340 1wy6_A Hypothetical protein ST 29.5 1.7E+02 0.0057 23.0 6.6 34 266-299 120-153 (172)
341 3q7a_A Farnesyltransferase alp 29.4 3.1E+02 0.011 24.5 10.5 85 202-299 140-236 (349)
342 3l8r_A PTCA, putative PTS syst 29.3 1.8E+02 0.0062 21.8 9.6 68 186-260 36-118 (120)
343 2hf1_A Tetraacyldisaccharide-1 29.0 21 0.00071 24.1 1.3 33 142-176 5-37 (68)
344 2crb_A Nuclear receptor bindin 28.8 1.2E+02 0.0041 21.7 5.2 43 227-269 13-56 (97)
345 4a17_Y RPL37A, 60S ribosomal p 28.6 42 0.0014 24.6 2.9 13 163-175 52-64 (103)
346 2wm9_A Dedicator of cytokinesi 27.4 2.6E+02 0.0088 25.8 9.0 50 231-282 90-139 (428)
347 4a5x_A MITD1, MIT domain-conta 27.4 1.6E+02 0.0054 20.5 7.3 32 188-219 17-48 (86)
348 3ga8_A HTH-type transcriptiona 27.3 58 0.002 22.2 3.4 28 164-191 35-63 (78)
349 1m1j_A Fibrinogen alpha subuni 26.8 3.9E+02 0.013 24.9 11.0 19 305-323 172-190 (491)
350 1zb1_A BRO1 protein; AIP1, BRO 26.8 3.6E+02 0.012 24.4 13.0 59 270-328 256-319 (392)
351 3iz5_m 60S ribosomal protein L 26.8 54 0.0018 23.5 3.1 13 163-175 52-64 (92)
352 3mcx_A SUSD superfamily protei 26.2 1.1E+02 0.0038 28.5 6.3 34 225-258 198-231 (477)
353 3j21_g 50S ribosomal protein L 26.1 27 0.00092 22.1 1.3 27 142-174 11-37 (51)
354 3qzr_A 3C protein; chymotrypsi 26.0 90 0.0031 25.5 4.9 64 40-105 15-84 (187)
355 3t5x_A PCI domain-containing p 25.5 82 0.0028 25.9 4.7 32 270-301 13-44 (203)
356 3izc_m 60S ribosomal protein R 24.1 62 0.0021 23.2 3.0 13 163-175 52-64 (92)
357 3ax2_A Mitochondrial import re 23.2 85 0.0029 21.4 3.5 25 275-299 21-45 (73)
358 2wxu_A Phospholipase C; cytoly 22.7 1.6E+02 0.0054 26.8 6.2 41 270-310 97-137 (370)
359 2v6x_A Vacuolar protein sortin 22.5 1.9E+02 0.0066 19.8 8.3 35 185-219 11-45 (85)
360 3mkq_A Coatomer beta'-subunit; 22.4 2.3E+02 0.0078 27.6 8.1 51 238-288 745-800 (814)
361 2exd_A NFED short homolog; mem 22.4 64 0.0022 22.3 2.9 31 74-104 31-61 (80)
362 3iqc_A FLIS, flagellar protein 22.3 2.4E+02 0.0083 21.3 6.5 25 278-302 43-67 (131)
363 1m2o_A SEC23, protein transpor 21.9 41 0.0014 34.0 2.4 30 146-175 54-87 (768)
364 3j21_i 50S ribosomal protein L 21.4 23 0.00079 24.9 0.4 29 145-175 35-63 (83)
365 4ard_A Capsid protein P27; vir 21.3 98 0.0034 23.1 3.8 19 303-321 14-32 (116)
366 2yin_A DOCK2, dedicator of cyt 21.1 4.9E+02 0.017 24.0 10.4 92 187-281 35-143 (436)
367 2xze_A STAM-binding protein; h 20.7 1.2E+02 0.004 23.6 4.4 39 231-270 42-80 (146)
368 3qt1_I DNA-directed RNA polyme 20.6 57 0.002 25.0 2.5 28 147-176 26-57 (133)
369 2vkj_A TM1634; membrane protei 20.5 1.8E+02 0.0062 20.7 4.8 32 185-216 51-82 (106)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=8.2e-57 Score=438.71 Aligned_cols=298 Identities=23% Similarity=0.379 Sum_probs=267.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhccccccccCC-CCceeeEecccccccccCCccCcEEEEe
Q 019809 3 DIDEKQLLLYAQIANLVNLILQW--PEISINEIAENFSKLACNAHTICNSE-LRPLGTGLYPVISIINHSCLPNAVLVFE 79 (335)
Q Consensus 3 ~~~~~~~~~~~~~a~~~~~~l~~--~~~~~~~~~~~~~~~~~N~~~~~~~~-~~~~g~~~~~~~s~~nHsC~pn~~~~~~ 79 (335)
++++++...+...+..+..+++. ..++.+++..+++++.+|+|+|.+.+ ...+|+||||.+|+|||||.|||.+.|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~N~f~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~ 217 (490)
T 3n71_A 138 HFGEEEQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFN 217 (490)
T ss_dssp GCCHHHHHHHHHHHHHHHHHSCTTSCCCCHHHHHHHHHHHHTTEEEEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEE
T ss_pred hcCchHHHHHHHHHHHHHHHccccccCCCHHHHHHHHHHHhccCcccccCCCCccceEEEchhhhhcccCCCCCeeEEec
Confidence 45666666666655556667763 36899999999999999999999877 5789999999999999999999999999
Q ss_pred CC-------------EEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEeccccCCcccCCcchhhhhhhcC
Q 019809 80 GR-------------LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGY 146 (335)
Q Consensus 80 ~~-------------~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~ 146 (335)
++ .+.|+|++||++||||||||++..+++.+||+.|+++|+|.|.|.+|.++.+ .+.++. +
T Consensus 218 ~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~-----~~~~~~-~ 291 (490)
T 3n71_A 218 NGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLK-----DDLFLA-A 291 (490)
T ss_dssp CCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCHHHHHTTT-----HHHHTC-B
T ss_pred CCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCCCCCCCCc-----ccchhh-c
Confidence 87 8999999999999999999999999999999999999999999999999632 223332 2
Q ss_pred ccCCCCCCcceecCCCCCccccCcCCCCCcHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCCh
Q 019809 147 RCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV 226 (335)
Q Consensus 147 ~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~ 226 (335)
.+ +...+.+.+..+++.++.+.+.+..+..+|++++|+.+++++++++.+++|++|+
T Consensus 292 ~~-----------------------~~~~s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp 348 (490)
T 3n71_A 292 KE-----------------------DPKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNL 348 (490)
T ss_dssp CS-----------------------SSCCCHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSH
T ss_pred cc-----------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCH
Confidence 11 1123567788888899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcC
Q 019809 227 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 306 (335)
Q Consensus 227 ~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G 306 (335)
.++.++++|+.+|..+|+|++|+.++++++++++++||++||.+|..+++||.+|..+|++++|+.+|++|++|++.++|
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHhccc
Q 019809 307 TNSPFMKELILKLEEAQAEASYK 329 (335)
Q Consensus 307 ~~hp~~~~l~~~l~~~~~el~~~ 329 (335)
++||.|.++..+|.+++.|++..
T Consensus 429 ~~Hp~~~~~~~~l~~~~~e~~~~ 451 (490)
T 3n71_A 429 PSHPITKDLEAMRMQTEMELRMF 451 (490)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877653
No 2
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=1.9e-56 Score=429.83 Aligned_cols=291 Identities=23% Similarity=0.435 Sum_probs=254.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHhccccccccCCCCceeeEecccccccccCCccCcEEEEeC
Q 019809 3 DIDEKQLLLYAQIANLVNLILQW--PEISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEG 80 (335)
Q Consensus 3 ~~~~~~~~~~~~~a~~~~~~l~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~g~~~~~~~s~~nHsC~pn~~~~~~~ 80 (335)
++++++...+......+..+++. ..++.+++.++++++.+|+|+|.+.+...+|+||||.+|+|||||.||+.+.|+|
T Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~N~f~i~~~~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~ 219 (433)
T 3qww_A 140 KLDNEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKG 219 (433)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHHCEEEECTTCCEEEEEECTTGGGSEECSSCSEEEEEET
T ss_pred ccChHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHcCCceecccCCccceeEEecccccccCCCCCCCceEEEcC
Confidence 44555544554545555666543 4568999999999999999999999888999999999999999999999999999
Q ss_pred CEEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEeccccCCcccCCcchhhhhhhcCccCCCCCCcceecC
Q 019809 81 RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRD 160 (335)
Q Consensus 81 ~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~g~~~~~ 160 (335)
+.++|+|+++|++||||||||++..+++.+||+.|+++|+|.|.|.+|.++++ +....++++ |
T Consensus 220 ~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~------d~~~~~~~~----~------- 282 (433)
T 3qww_A 220 TLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKDK------DKAKVEVRK----L------- 282 (433)
T ss_dssp TEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSHHHHHCTT------HHHHTCBCC----C-------
T ss_pred CEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECCCCCCCCc------chhhhhhhh----c-------
Confidence 99999999999999999999999999999999999999999999999999632 222222221 1
Q ss_pred CCCCccccCcCCCCCcHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHH
Q 019809 161 SDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM 240 (335)
Q Consensus 161 ~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~ 240 (335)
+.....+.+..+.......++...+....|++++|+.+++++++++.+++|++|+.++.++++|+.+|.
T Consensus 283 -----------~~~~~~e~v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~ 351 (433)
T 3qww_A 283 -----------SSPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL 351 (433)
T ss_dssp -----------SSCCCHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH
T ss_pred -----------CCCccHHHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH
Confidence 112234566666666667777766667789999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHH
Q 019809 241 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 241 ~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~ 320 (335)
.+|+|++|+.++++++++++++||++||.+|..+++||.+|+.+|++++|+.+|++|++|++.++|++||.|+++.++|+
T Consensus 352 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 352 YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred H
Q 019809 321 E 321 (335)
Q Consensus 321 ~ 321 (335)
+
T Consensus 432 ~ 432 (433)
T 3qww_A 432 S 432 (433)
T ss_dssp C
T ss_pred c
Confidence 4
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=5.8e-56 Score=426.87 Aligned_cols=287 Identities=30% Similarity=0.511 Sum_probs=254.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCC------CCCHHHHHHHHHHHhccccccccCCCCceeeEecccccccccCCccCcEE
Q 019809 3 DIDEKQLLLYAQIANLVNLILQWP------EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVL 76 (335)
Q Consensus 3 ~~~~~~~~~~~~~a~~~~~~l~~~------~~~~~~~~~~~~~~~~N~~~~~~~~~~~~g~~~~~~~s~~nHsC~pn~~~ 76 (335)
++++++...+..++..+..+++.. .++.+++.++++++.+|+|+|.+.+...+|.|+||.+|+|||||.||+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~N~f~i~~~~~~~~g~~l~~~~s~~NHsC~PN~~~ 215 (429)
T 3qwp_A 136 KLTEDRKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSI 215 (429)
T ss_dssp GCCHHHHHHHHHHHHHHHHHTTTTCCSGGGSCTTCCHHHHHHHHHHHCEEEECTTSCEEEEEECTTGGGCEECSSCSEEE
T ss_pred hcChhHHHHHHHHHHHHHHHHhhhcCccccCCCHHHHHHHHHHHHhcCccccccccccceEEEchhhHhhCcCCCCCeEE
Confidence 456677778888888888888643 23567899999999999999999888899999999999999999999999
Q ss_pred EEeCCEEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEeccccCCcccCCcchhhhhhhcCccCCCCCCcc
Q 019809 77 VFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGF 156 (335)
Q Consensus 77 ~~~~~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~g~ 156 (335)
.|+|+.++|+|+++|++||||||||++..+++.+||+.|+++|+|.|.|.+|.++.. .+.++.+
T Consensus 216 ~~~~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~-----~~~~~~~----------- 279 (429)
T 3qwp_A 216 VFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQDK-----DADMLTG----------- 279 (429)
T ss_dssp EEETTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHHTTT-----HHHHTCS-----------
T ss_pred EEeCCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCCCcc-----ccccccc-----------
Confidence 999999999999999999999999999999999999999999999999999999631 1122110
Q ss_pred eecCCCCCccccCcCCCCCcHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHH
Q 019809 157 LLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLI 236 (335)
Q Consensus 157 ~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~ 236 (335)
. . .....++.+......+..+|++++|+.+++++++++.+++|++|+.++.++++|+
T Consensus 280 ----~-~------------------~~~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~ 336 (429)
T 3qwp_A 280 ----D-E------------------QVWKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAM 336 (429)
T ss_dssp ----C-H------------------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHH
T ss_pred ----c-h------------------hhhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHH
Confidence 0 0 0112233444555566788999999999999999999999999999999999999
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHH
Q 019809 237 KILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 316 (335)
Q Consensus 237 ~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~ 316 (335)
.+|..+|+|++|++++++++.+++++||++||.+|..+++||.+|+.+|++++|+.+|++|++|++.++|++||.|+++.
T Consensus 337 ~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 416 (429)
T 3qwp_A 337 DACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLI 416 (429)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 019809 317 LKLEEAQAEASY 328 (335)
Q Consensus 317 ~~l~~~~~el~~ 328 (335)
.+|++++.|+..
T Consensus 417 ~~l~~~~~e~~~ 428 (429)
T 3qwp_A 417 LLLEECDANIRA 428 (429)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999863
No 4
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.64 E-value=4.3e-17 Score=143.25 Aligned_cols=81 Identities=28% Similarity=0.398 Sum_probs=68.7
Q ss_pred HhccccccccCCCCceeeEeccc-ccccccCCccCcEEEEe-CCEEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhc
Q 019809 40 LACNAHTICNSELRPLGTGLYPV-ISIINHSCLPNAVLVFE-GRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKE 117 (335)
Q Consensus 40 ~~~N~~~~~~~~~~~~g~~~~~~-~s~~nHsC~pn~~~~~~-~~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~ 117 (335)
...|.|.+..+. ...+.++|+. ++++||||.|||.+.+. +..+.|+|+++|++|||||++|++.++.
T Consensus 154 ~~~n~f~i~~~~-~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~---------- 222 (247)
T 3rq4_A 154 AGENDFSIMYST-RKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFG---------- 222 (247)
T ss_dssp TTTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSS----------
T ss_pred ccCCcEEEEecC-CcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcC----------
Confidence 347889887553 3467899998 78999999999977754 6789999999999999999999999774
Q ss_pred cCCeEEeccccCCc
Q 019809 118 QYLFTCTCPRCIKL 131 (335)
Q Consensus 118 ~~~F~C~C~~C~~~ 131 (335)
.++|.|.|.+|.++
T Consensus 223 ~~~f~C~C~~C~~~ 236 (247)
T 3rq4_A 223 EKNEHCECHTCERK 236 (247)
T ss_dssp GGGTTCCCHHHHHH
T ss_pred CCCCEEECCCCCCC
Confidence 57899999999985
No 5
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.55 E-value=1.7e-15 Score=134.43 Aligned_cols=85 Identities=24% Similarity=0.340 Sum_probs=67.5
Q ss_pred HHHHhccccccccCCCCceeeEecccccccccCCccCcEEEEeCC-EEEEEeccccCCCCeEEEeecCCCCCHHHHHHHH
Q 019809 37 FSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGR-LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKAL 115 (335)
Q Consensus 37 ~~~~~~N~~~~~~~~~~~~g~~~~~~~s~~nHsC~pn~~~~~~~~-~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L 115 (335)
+.....|.|.+..+.....+......++++||||.|||.+.+.|. .+.++|+|||++|||||++|++..+.
T Consensus 180 ~~~~~~~dF~i~~s~~~~~a~~~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~-------- 251 (273)
T 3s8p_A 180 LLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFG-------- 251 (273)
T ss_dssp HCCTTTSCTTEEEETTTTEEEEEESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTS--------
T ss_pred HhhhcccccceeccccccccceecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcC--------
Confidence 444467888887544333444444456899999999999988776 89999999999999999999988765
Q ss_pred hccCCeEEeccccCCc
Q 019809 116 KEQYLFTCTCPRCIKL 131 (335)
Q Consensus 116 ~~~~~F~C~C~~C~~~ 131 (335)
.++|.|.|.+|...
T Consensus 252 --~~~f~C~C~~c~cr 265 (273)
T 3s8p_A 252 --ENNEFCECYTCERR 265 (273)
T ss_dssp --GGGTTCCCHHHHHH
T ss_pred --CCCeEEECCCCcCC
Confidence 46799999999874
No 6
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.37 E-value=4.4e-12 Score=123.30 Aligned_cols=112 Identities=13% Similarity=-0.071 Sum_probs=105.4
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..+...+..+..+|+|++|+.++++++++..+++|+.|+.++.++.+|+.+|..+|+|++|+.+++++++++++++|++|
T Consensus 352 ~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H 431 (490)
T 3n71_A 352 RLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSH 431 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 44555666777899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
|.++..+.+|+.++..++++++|+..|++|.+
T Consensus 432 p~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 432 PITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999854
No 7
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.37 E-value=2.6e-13 Score=106.85 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=49.0
Q ss_pred eeeEecccccccccCCccCcEEEEe--CCEEEEEeccccCCCCeEEEeecCCCCCH
Q 019809 55 LGTGLYPVISIINHSCLPNAVLVFE--GRLAVVRAVQHVPKGAEVLISYIETAGST 108 (335)
Q Consensus 55 ~g~~~~~~~s~~nHsC~pn~~~~~~--~~~~~~~a~~~i~~g~el~~~Y~~~~~~~ 108 (335)
-+..++|.++++||||.|||.+.++ +..+.++|+|+|++|||||++|++..+..
T Consensus 57 d~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 57 MSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp EEEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred ccccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 5788999999999999999999887 34899999999999999999999988765
No 8
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.33 E-value=8.7e-11 Score=103.15 Aligned_cols=141 Identities=17% Similarity=0.167 Sum_probs=128.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+..+...|++++|+..+++++.+....+++.++....++..++.++...|++++|+.++++++...+...++.+|
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 124 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHP 124 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 34455666778899999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhccc
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 329 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~~ 329 (335)
..+..+.++|.++..+|++++|+.++++|+.+.+...|+++|....+...+..+.......
T Consensus 125 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 125 DVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999999999888888888776655443
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.23 E-value=1.5e-10 Score=101.66 Aligned_cols=131 Identities=14% Similarity=0.043 Sum_probs=121.2
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 277 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~L 277 (335)
.+.|++++|+..+++++.+..++.++.++....++..++.++...|++++|+.++.+++...+..+|+.+|..+..+.++
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 91 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNL 91 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 46689999999999999998888888889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcc
Q 019809 278 GKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 278 a~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~ 328 (335)
|.++..+|++++|+.++.+|+.+.+...|+++|....+...+..+...+..
T Consensus 92 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 142 (283)
T 3edt_B 92 AVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGK 142 (283)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999998888888877655543
No 10
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.22 E-value=6.8e-12 Score=106.61 Aligned_cols=54 Identities=28% Similarity=0.538 Sum_probs=40.6
Q ss_pred ccccccCCccCcEEEE---eC-CEEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEec
Q 019809 63 ISIINHSCLPNAVLVF---EG-RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTC 125 (335)
Q Consensus 63 ~s~~nHsC~pn~~~~~---~~-~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C 125 (335)
++++||||.|||.+.+ +| ..+.++|+|+|++|||||++|.+..+.. .+.|.|.|
T Consensus 125 arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~---------~~~~~C~C 182 (192)
T 2w5y_A 125 ARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDA---------SNKLPCNC 182 (192)
T ss_dssp GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC----------------CCBCCC
T ss_pred hHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcC---------CCCceeEC
Confidence 4678999999998643 34 3789999999999999999999877642 46799988
No 11
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.19 E-value=9.7e-11 Score=112.14 Aligned_cols=88 Identities=16% Similarity=0.125 Sum_probs=83.0
Q ss_pred hchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHH
Q 019809 241 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 241 ~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~ 320 (335)
..|+|++|++++++++++.++++|++||.++..+.+||.+|..+|++++|+.++++|++|.+..+|++||.+...+.+|.
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcc
Q 019809 321 EAQAEASY 328 (335)
Q Consensus 321 ~~~~el~~ 328 (335)
.+....+.
T Consensus 390 ~~~~~qg~ 397 (433)
T 3qww_A 390 RLYMGLEN 397 (433)
T ss_dssp HHHHHTTC
T ss_pred HHHHhccC
Confidence 88765543
No 12
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=1.7e-09 Score=96.46 Aligned_cols=138 Identities=15% Similarity=0.133 Sum_probs=124.8
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
...+..+...|++++|+..+++++.+....+++.++....++..++.++...|++++|+.++++++...+..+|+.+|..
T Consensus 73 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (311)
T 3nf1_A 73 NILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDV 152 (311)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 34555566789999999999999998888888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcc
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~ 328 (335)
+..+.++|.++...|++++|+.++++|+.+.+...|+++|....+...+..+......
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 210 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK 210 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999988888888777655544
No 13
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=1.8e-09 Score=96.32 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=124.7
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+..+...|++++|+..+++++.+.....++.++....+...++.++...|++++|+.++++++...+..++..+|
T Consensus 29 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 108 (311)
T 3nf1_A 29 TLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHP 108 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 34455666678899999999999999987777777788888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
..+..++.+|.++...|++++|+.++++|+++.+..+|+++|....+...+..+.....
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 167 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQG 167 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999998888888877755443
No 14
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.10 E-value=2.3e-11 Score=101.33 Aligned_cols=54 Identities=22% Similarity=0.233 Sum_probs=44.2
Q ss_pred ccccccCCccCcEEE--EeCC--EEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHh
Q 019809 63 ISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALK 116 (335)
Q Consensus 63 ~s~~nHsC~pn~~~~--~~~~--~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~ 116 (335)
+.++||||.|||... +.++ .+.++|+|||++|||||++|.+.......|+..|+
T Consensus 108 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~L~ 165 (166)
T 3f9x_A 108 GRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSKASIEAHPWLK 165 (166)
T ss_dssp GGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCHHHHHHCGGGG
T ss_pred hheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChhhHhhhCchhc
Confidence 467899999998764 3343 68899999999999999999998877777766665
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.10 E-value=3e-10 Score=108.72 Aligned_cols=93 Identities=22% Similarity=0.180 Sum_probs=86.1
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHH
Q 019809 236 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKEL 315 (335)
Q Consensus 236 ~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l 315 (335)
+..+..+|+|++|++++++++++.++++|+.||.++..+.+||.+|..+|++++|+.++++|++|.+..+|++||.+...
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc
Q 019809 316 ILKLEEAQAEASY 328 (335)
Q Consensus 316 ~~~l~~~~~el~~ 328 (335)
+.+|..+....+.
T Consensus 374 l~nLa~~~~~~g~ 386 (429)
T 3qwp_A 374 VMKVGKLQLHQGM 386 (429)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999888766544
No 16
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.04 E-value=8e-11 Score=102.58 Aligned_cols=60 Identities=23% Similarity=0.278 Sum_probs=45.0
Q ss_pred Eecccc-cccccCCccCcEEEE--eCC--EEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEecc
Q 019809 58 GLYPVI-SIINHSCLPNAVLVF--EGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 126 (335)
Q Consensus 58 ~~~~~~-s~~nHsC~pn~~~~~--~~~--~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 126 (335)
..+... .++||||.||+.+.. .++ .+.++|+|+|++|||||++|.+..+.. ...|.|.|.
T Consensus 141 ~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~---------~~~~~C~CG 205 (222)
T 3ope_A 141 YRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNV---------EKQQLCKCG 205 (222)
T ss_dssp SSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCC---------SCCCBCCCC
T ss_pred ccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCC---------cCCCEeeCC
Confidence 334444 478999999997654 333 688999999999999999999876542 345777654
No 17
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=99.03 E-value=1.9e-10 Score=111.73 Aligned_cols=92 Identities=14% Similarity=0.111 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHhccccccccCCCCceeeEecccccccccCCccCc-EEEEeCCEEEEEeccccCCCCeEEEeecCCC
Q 019809 27 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNA-VLVFEGRLAVVRAVQHVPKGAEVLISYIETA 105 (335)
Q Consensus 27 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~g~~~~~~~s~~nHsC~pn~-~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~ 105 (335)
.++.++....++.+.+++|.+...+....+.+++|.+.++||||.|+. .+.++++.+.++|.++|++||||+|||++..
T Consensus 237 ~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~~ 316 (497)
T 3smt_A 237 SFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRS 316 (497)
T ss_dssp CCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSCC
T ss_pred ccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCCC
Confidence 478899999999999999999766666678999999999999999964 3444567899999999999999999999853
Q ss_pred CCHHHHHHHHhccCCeEEe
Q 019809 106 GSTMTRQKALKEQYLFTCT 124 (335)
Q Consensus 106 ~~~~~R~~~L~~~~~F~C~ 124 (335)
...|...|||.+.
T Consensus 317 ------n~~Ll~~YGFv~~ 329 (497)
T 3smt_A 317 ------NAEFVIHSGFFFD 329 (497)
T ss_dssp ------HHHHHHHHSCCCT
T ss_pred ------hHHHHHHCCCCCC
Confidence 2566779999975
No 18
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=99.03 E-value=1.9e-10 Score=100.84 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=46.5
Q ss_pred eeeEeccc-ccccccCCccCcEEEE--eC--CEEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEecc
Q 019809 55 LGTGLYPV-ISIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 126 (335)
Q Consensus 55 ~g~~~~~~-~s~~nHsC~pn~~~~~--~~--~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 126 (335)
|....+.. +.++||||.||+.+.+ .+ ..+.++|+|+|++|||||++|....+. ...|.|.|.
T Consensus 157 IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 223 (232)
T 3ooi_A 157 IDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLG----------NGKTVCKCG 223 (232)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTT----------CTTCBCCCC
T ss_pred EeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCC----------CCCcEeECC
Confidence 44444544 4578999999997743 22 368899999999999999999876643 346888773
No 19
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.97 E-value=5.7e-10 Score=107.25 Aligned_cols=92 Identities=23% Similarity=0.227 Sum_probs=77.5
Q ss_pred CCCHHHHHHHHHHHhccccccccCC----CCceeeEecccccccccCCccCcEEEEeCCEEEEEeccccCCCCeEEEeec
Q 019809 27 EISINEIAENFSKLACNAHTICNSE----LRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYI 102 (335)
Q Consensus 27 ~~~~~~~~~~~~~~~~N~~~~~~~~----~~~~g~~~~~~~s~~nHsC~pn~~~~~~~~~~~~~a~~~i~~g~el~~~Y~ 102 (335)
.++.+.....++.+.+.+|.+...+ ...-+.++.|.+.++||+|.||+.+.|+++.+.++|.++|++||||+|||+
T Consensus 183 ~~t~e~f~wA~~~v~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG 262 (449)
T 3qxy_A 183 VRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYG 262 (449)
T ss_dssp GCCHHHHHHHHHHHHHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECSSEEEEEESSCBCTTCEEEECCS
T ss_pred cCcHHHHHHHHHHHHHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeCCeEEEEECCCcCCCchhhccCC
Confidence 3678888888999999999875322 224678999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCeEEe
Q 019809 103 ETAGSTMTRQKALKEQYLFTCT 124 (335)
Q Consensus 103 ~~~~~~~~R~~~L~~~~~F~C~ 124 (335)
+.. ...|...|||...
T Consensus 263 ~~~------n~~ll~~YGF~~~ 278 (449)
T 3qxy_A 263 QMA------NWQLIHMYGFVEP 278 (449)
T ss_dssp SCC------HHHHHHHHSCCCC
T ss_pred CCC------HHHHHHhCCCCCC
Confidence 843 2566669999873
No 20
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.95 E-value=3.6e-10 Score=101.35 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=43.8
Q ss_pred eEeccc-ccccccCCccCcEEE--EeCC--EEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEecc
Q 019809 57 TGLYPV-ISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 126 (335)
Q Consensus 57 ~~~~~~-~s~~nHsC~pn~~~~--~~~~--~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 126 (335)
...+.. +.++||||.|||.+. +.++ .+.++|+|+|++|||||++|....+. ...|.|.|.
T Consensus 184 a~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 248 (278)
T 3h6l_A 184 ATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYG----------KEAQKCFCG 248 (278)
T ss_dssp CSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEEC----------SSCEECCCC
T ss_pred CcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCC----------CCCcEeECC
Confidence 333444 457899999998653 3333 68899999999999999999865432 346888763
No 21
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.95 E-value=6e-08 Score=76.27 Aligned_cols=102 Identities=12% Similarity=0.107 Sum_probs=86.9
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
..+.+..+...|++++|+..|.+++++ .|.+ ..++.+++.+|..+|+|++|++.+.+++.+... .+..++.
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~-----~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~ 81 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIEL-----DPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-TRADYKL 81 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-cchhhHH
Confidence 334556677889999999999999874 4555 446788999999999999999999999987654 4567788
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
++..++++|.++..+|++++|+.+|++|+.+
T Consensus 82 ~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 82 IAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999874
No 22
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.94 E-value=3.9e-08 Score=76.25 Aligned_cols=121 Identities=11% Similarity=0.020 Sum_probs=99.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
+..+..+...|++++|+..+++++.. .|.+.....+...++.++...|++++|+.++.+++.. .+.++..
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~ 75 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDKA 75 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTTH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCccc
Confidence 44566667889999999999988763 5667766778889999999999999999999988863 2466666
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
...++.+|.++..+|++++|+.++++++... |+++........|..+...+
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~l~~~~ 126 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQSIRLGQ 126 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHhhh
Confidence 7889999999999999999999999998853 78999988888888776544
No 23
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.88 E-value=5.9e-10 Score=100.55 Aligned_cols=64 Identities=28% Similarity=0.462 Sum_probs=47.5
Q ss_pred ceeeEeccccc-ccccCCccCcEEE--EeC------CEEEEEeccccCCCCeEEEeecCCCCCHHHHHHHHhccCCeEEe
Q 019809 54 PLGTGLYPVIS-IINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCT 124 (335)
Q Consensus 54 ~~g~~~~~~~s-~~nHsC~pn~~~~--~~~------~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~R~~~L~~~~~F~C~ 124 (335)
.|....+...+ ++||||.||+.+. |.. ..+.++|+|+|++|||||++|.+.++... ...|.|.
T Consensus 207 ~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~--------~~~~~C~ 278 (287)
T 3hna_A 207 CIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIK--------GKLFSCR 278 (287)
T ss_dssp EEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHH--------TTTCCCC
T ss_pred EEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccC--------CCcCEee
Confidence 35566666655 6699999999753 321 27999999999999999999986544321 3478998
Q ss_pred c
Q 019809 125 C 125 (335)
Q Consensus 125 C 125 (335)
|
T Consensus 279 C 279 (287)
T 3hna_A 279 C 279 (287)
T ss_dssp C
T ss_pred C
Confidence 7
No 24
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.86 E-value=1.2e-09 Score=99.40 Aligned_cols=63 Identities=27% Similarity=0.502 Sum_probs=34.9
Q ss_pred ccccccCCccCcEEEE-eC-------CEEEEEeccccCCCCeEEEeecCCCCCHHH-HHHHHhccCCeEEec
Q 019809 63 ISIINHSCLPNAVLVF-EG-------RLAVVRAVQHVPKGAEVLISYIETAGSTMT-RQKALKEQYLFTCTC 125 (335)
Q Consensus 63 ~s~~nHsC~pn~~~~~-~~-------~~~~~~a~~~i~~g~el~~~Y~~~~~~~~~-R~~~L~~~~~F~C~C 125 (335)
+.++||||.||+.+.. .+ ..+.++|+|+|++|||||++|.+..+.... +....+....|.|.|
T Consensus 221 arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~C 292 (302)
T 1ml9_A 221 TRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC 292 (302)
T ss_dssp GGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-----------------------
T ss_pred HHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeC
Confidence 4579999999997643 22 268999999999999999999987664321 111222234577876
No 25
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.85 E-value=8.8e-08 Score=78.01 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhccc---CCC-------ChhHHHHHHHHHHHHHhchhHHHHHHHHHH
Q 019809 185 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY---HPF-------SVNLMQTREKLIKILMELEDWKEALAYCQL 254 (335)
Q Consensus 185 ~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l---~~~-------h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~ 254 (335)
..+..+.+.+..+...|++++|+..|.+++.+..... .|. ++....++.+++.+|..+|+|++|+.++.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3455667778888899999999999999988643321 122 344567888999999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 255 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 255 ~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
++.+ .|.....++++|.++..+|++++|+..|++|+.+
T Consensus 89 al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 89 VLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 9875 3444568999999999999999999999999987
No 26
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.84 E-value=1.3e-07 Score=74.26 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=86.0
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
+...+.+..+...|++++|+..|++++++ .|.++ .++.+++.++..+|++++|+..+.+++.+ .
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~ 77 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKR-----DPENA---ILYSNRAACLTKLMEFQRALDDCDTCIRL--------D 77 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHhhccHHHHHHHHHHHHHh--------h
Confidence 34455677788999999999999998764 44453 45778999999999999999999999874 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 314 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~ 314 (335)
|.....++++|.++..+|++++|+..|++|+++ -|+++..+.
T Consensus 78 p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l-----~P~~~~a~~ 119 (126)
T 4gco_A 78 SKFIKGYIRKAACLVAMREWSKAQRAYEDALQV-----DPSNEEARE 119 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred hhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CcCCHHHHH
Confidence 334467899999999999999999999999985 567765544
No 27
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.83 E-value=1.8e-09 Score=95.96 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=37.0
Q ss_pred ccccccCCccCcEEEE--e---CCEEEEEeccccCCCCeEEEeecCCCCC
Q 019809 63 ISIINHSCLPNAVLVF--E---GRLAVVRAVQHVPKGAEVLISYIETAGS 107 (335)
Q Consensus 63 ~s~~nHsC~pn~~~~~--~---~~~~~~~a~~~i~~g~el~~~Y~~~~~~ 107 (335)
+.++||||.|||.+.+ + +..+.++|+|||++|||||++|.....+
T Consensus 187 aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~~ 236 (261)
T 2f69_A 187 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 236 (261)
T ss_dssp GGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCC
T ss_pred eeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCcccc
Confidence 4688999999998876 2 2345899999999999999999866543
No 28
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.79 E-value=2.8e-07 Score=71.44 Aligned_cols=121 Identities=15% Similarity=0.123 Sum_probs=93.6
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..+...+..+...|++++|+..|++++.+ .|.+ ..++.+++.++...|++++|+..+++++.. .
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~ 68 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEK--------D 68 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------C
Confidence 44566677778899999999999998775 3444 356788999999999999999999998875 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
|.....++++|.++..+|++++|+..+++|+.+-.... +.|...++...+..+...+
T Consensus 69 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 69 PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHHhh
Confidence 33356789999999999999999999999999763331 2344456666666665544
No 29
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.77 E-value=4.4e-09 Score=95.41 Aligned_cols=44 Identities=20% Similarity=0.320 Sum_probs=36.8
Q ss_pred ccccccCCccCcEEE--EeC------CEEEEEeccccCCCCeEEEeecCCCC
Q 019809 63 ISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETAG 106 (335)
Q Consensus 63 ~s~~nHsC~pn~~~~--~~~------~~~~~~a~~~i~~g~el~~~Y~~~~~ 106 (335)
+.++||||.||+.+. +.+ ..+.++|+|+|++|||||++|.+..+
T Consensus 214 aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 214 SRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp GGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred hheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 457899999999763 322 37899999999999999999988766
No 30
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.74 E-value=9.7e-07 Score=72.34 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=103.7
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCC---CC-hhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP---FS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 261 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~---~h-~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~ 261 (335)
+...+...+..+...|++++|+..|.+++++.-..... ++ +.-..++.+++.++..+|+|++|+..+.++|+++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 44556677788888999999999999999875331000 11 123447889999999999999999999999997655
Q ss_pred hcCCCChHHHHHH----HHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 262 VYPQFHPLLGLQY----YTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 262 ~~p~~hp~~~~~l----~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
.. ...|..+..+ +++|.++..+|++++|+..|++|+++-----| --+....+.+++++-+..|
T Consensus 90 ~~-e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~-~~~~~~~~~~~~~~~~~k~ 156 (159)
T 2hr2_A 90 RG-ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG-ETPGKERMMEVAIDRIAQL 156 (159)
T ss_dssp HC-CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS-CCTTHHHHHHHHHHHHHHH
T ss_pred cc-cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHHHHh
Confidence 53 4567777788 99999999999999999999999998544333 3344455555555544444
No 31
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.73 E-value=7.7e-09 Score=93.78 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=36.2
Q ss_pred cccccccCCccCcEEE--EeC------CEEEEEeccccCCCCeEEEeecCCC
Q 019809 62 VISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETA 105 (335)
Q Consensus 62 ~~s~~nHsC~pn~~~~--~~~------~~~~~~a~~~i~~g~el~~~Y~~~~ 105 (335)
.+.++||||.||+.+. +.+ ..+.++|+|+|++|||||++|.+..
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~ 266 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKG 266 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSS
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCc
Confidence 3568999999999764 321 3789999999999999999998763
No 32
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.73 E-value=6.2e-09 Score=94.53 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=35.2
Q ss_pred ccccccCCccCcEEEEe-----CCEEEEEeccccCCCCeEEEeecCCC
Q 019809 63 ISIINHSCLPNAVLVFE-----GRLAVVRAVQHVPKGAEVLISYIETA 105 (335)
Q Consensus 63 ~s~~nHsC~pn~~~~~~-----~~~~~~~a~~~i~~g~el~~~Y~~~~ 105 (335)
++++||||.|||.+.+. +..+.++|+|+|++|||||++|....
T Consensus 241 ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~ 288 (293)
T 1h3i_A 241 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDH 288 (293)
T ss_dssp GGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTB
T ss_pred eeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCC
Confidence 44789999999988762 22358999999999999999997544
No 33
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.72 E-value=9.4e-09 Score=83.55 Aligned_cols=45 Identities=18% Similarity=0.313 Sum_probs=40.1
Q ss_pred ccccccCCcc---CcEEEEeCCEEEEEeccccCCCCeEEEeecCCCCC
Q 019809 63 ISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGS 107 (335)
Q Consensus 63 ~s~~nHsC~p---n~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~~~ 107 (335)
+.++||||.| ||...-.++.+.++|+|+|++||||++.|.+...+
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred eeeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEccCCccCC
Confidence 4588999999 99987677899999999999999999999887654
No 34
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.72 E-value=6e-07 Score=71.19 Aligned_cols=134 Identities=14% Similarity=0.074 Sum_probs=103.7
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
......+..+...|++++|+..+++++.+.... +.......+...++.++...|++++|++++++++...+.. ...
T Consensus 10 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~ 85 (164)
T 3ro3_A 10 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDR 85 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCc
Confidence 344455666678899999999999988875542 2234556788899999999999999999999999988765 455
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
+..+..++++|.++...|++++|+.++++|+.+.+.. | +++....+...+..+.....
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~~~g 143 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYTALG 143 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHHHcc
Confidence 6678899999999999999999999999999998765 2 34455555666666554443
No 35
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.70 E-value=3.2e-07 Score=74.70 Aligned_cols=112 Identities=10% Similarity=0.092 Sum_probs=87.9
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..++..+..+...|++++|+..|++++.+ .|.++. +..+++.++...|++++|+..+++++.+. +.+
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~~g~~~~Ai~~~~~al~l~-----P~~ 103 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQIKEQFQQAADLYAVAFALG-----KND 103 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHHccHHHHHHHHHHHHhhC-----CCC
Confidence 44566677778899999999999998764 555544 56789999999999999999999988743 345
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~ 320 (335)
| ..++++|.++..+|++++|+..|++|+.+ .|+++.-......|+
T Consensus 104 ~---~~~~~lg~~~~~lg~~~eA~~~~~~al~l-----~~~~~~~~~A~~ll~ 148 (151)
T 3gyz_A 104 Y---TPVFHTGQCQLRLKAPLKAKECFELVIQH-----SNDEKLKIKAQSYLD 148 (151)
T ss_dssp C---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCHHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHH
Confidence 5 46899999999999999999999999986 356664444444433
No 36
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.70 E-value=1.2e-08 Score=92.27 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=39.5
Q ss_pred eccc-ccccccCCccCcEEEE---eC--CEEEEEeccccCCCCeEEEeecCCCCC
Q 019809 59 LYPV-ISIINHSCLPNAVLVF---EG--RLAVVRAVQHVPKGAEVLISYIETAGS 107 (335)
Q Consensus 59 ~~~~-~s~~nHsC~pn~~~~~---~~--~~~~~~a~~~i~~g~el~~~Y~~~~~~ 107 (335)
.+.. +.++||||.||+.+.. ++ .++.++|+|+|++|||||++|.+.++.
T Consensus 201 ~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~ 255 (290)
T 3bo5_A 201 YIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLN 255 (290)
T ss_dssp EEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTC
T ss_pred ecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccc
Confidence 3444 4588999999998753 33 479999999999999999999987753
No 37
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.69 E-value=4.9e-07 Score=83.99 Aligned_cols=131 Identities=10% Similarity=0.029 Sum_probs=107.8
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+......|++++|+..+++++.+...+ +.+.....++..++.+|...|++++|+.++.+++++++.. +..++..+.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~ 185 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHH
Confidence 6666778899999999999998765543 3455678889999999999999999999999999998775 445788899
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcc
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~ 328 (335)
.++++|.++..+|++++|+.++.+|+++.... ++++....+...+..+...+..
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~ 239 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKNSQSQ 239 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999998876 4556666666666666554443
No 38
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.68 E-value=7.1e-07 Score=72.03 Aligned_cols=120 Identities=12% Similarity=0.115 Sum_probs=91.5
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 187 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 187 ~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
....+..+..+...|++++|+..+++++.+ .|.++ .+...++.++...|+|++|+..+++++.. .+.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~ 87 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVL-----DHYDS---RFFLGLGACRQAMGQYDLAIHSYSYGAVM-----DIX 87 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHc-----CcccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCC
Confidence 344556677778899999999999988764 45554 34567899999999999999999998874 234
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
+| ..++++|.++..+|++++|+..|++|+.+- |++|...++...+..+...+.
T Consensus 88 ~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~l~~l~ 140 (148)
T 2vgx_A 88 EP---RFPFHAAECLLQXGELAEAESGLFLAQELI-----ANXPEFXELSTRVSSMLEAIK 140 (148)
T ss_dssp CT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----TTCGGGHHHHHHHHHHHHHC-
T ss_pred Cc---hHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----cCCCcchHHHHHHHHHHHHHH
Confidence 44 457899999999999999999999998864 456666666665555544443
No 39
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.66 E-value=6.9e-07 Score=71.12 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=92.6
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..++..+..+...|++++|+..+++++.. .|.++ .+...++.++...|++++|+.++++++.. .+.+
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~ 85 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCML-----DHYDA---RYFLGLGACRQSLGLYEQALQSYSYGALM-----DINE 85 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCCC
Confidence 34555667777889999999999988763 55554 34667899999999999999999998874 2344
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcc
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~ 328 (335)
| ..++++|.++..+|++++|+..|++|+.+. |++|....+..++......+..
T Consensus 86 ~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~l~~l~~ 138 (142)
T 2xcb_A 86 P---RFPFHAAECHLQLGDLDGAESGFYSARALA-----AAQPAHEALAARAGAMLEAVTA 138 (142)
T ss_dssp T---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----HTCGGGHHHHHHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHHHh
Confidence 5 357899999999999999999999999864 4666666666666655555443
No 40
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.62 E-value=2e-06 Score=70.00 Aligned_cols=99 Identities=12% Similarity=0.085 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 187 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 187 ~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
...+...+..+...|++++|+..|++++.+ .|.+ ..++.+++.+|...|++++|+.++++++.+.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------- 75 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSI-----APAN---PIYLSNRAAAYSASGQHEKAAEDAELATVVD------- 75 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-------
Confidence 344556677777889999999999998875 3444 4567889999999999999999999988752
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
|.....++++|.++..+|++++|+..|++|+.+-
T Consensus 76 -p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 76 -PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3335678999999999999999999999999864
No 41
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.61 E-value=1.5e-06 Score=80.71 Aligned_cols=134 Identities=12% Similarity=0.175 Sum_probs=106.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
......+......|++++|+..+.+++.+.... +..+.....++..++.+|...|++++|++++.+++++.+.. +++
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 220 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQP 220 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CCh
Confidence 344555666678899999999999999886653 33356778899999999999999999999999999988876 567
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
+..+..+++||.++..+|++++|+.++++|+.+.+.... .|....+...+..+...+
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~~ 277 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIHYKL 277 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHC
Confidence 888999999999999999999999999999999877643 133344455555554433
No 42
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=1.5e-06 Score=68.41 Aligned_cols=113 Identities=15% Similarity=0.151 Sum_probs=88.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|+..+++++. ..|.+.....++..++.++...+++++|+.++++++.. .|
T Consensus 30 ~~~~~a~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----~~---- 96 (148)
T 2dba_A 30 QLRKEGNELFKCGDYGGALAAYTQALG-----LDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK----DG---- 96 (148)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----TS----
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh----Cc----
Confidence 344556667788999999999998865 34555555778889999999999999999999998864 22
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHH
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 319 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l 319 (335)
.....++.+|.++..+|++++|+.++++++.+ .|+++.+...+..+
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 97 GDVKALYRRSQALEKLGRLDQAVLDLQRCVSL-----EPKNKVFQEALRNI 142 (148)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CSSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCcHHHHHHHHHH
Confidence 23566889999999999999999999999975 56676655544443
No 43
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.59 E-value=4.5e-06 Score=63.75 Aligned_cols=103 Identities=13% Similarity=0.126 Sum_probs=84.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++.+++..... .+..++
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~ 76 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKAKEL-----DPTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYR 76 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCcc---HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHH
Confidence 3445566667889999999999988764 3334 345678899999999999999999999987653 355667
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..+..++.+|.++...|++++|+.++++++.+
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 77889999999999999999999999999984
No 44
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=98.59 E-value=4.5e-08 Score=93.91 Aligned_cols=89 Identities=19% Similarity=0.235 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHHHhccccccccCCCCceeeEecccccccccCCccCc---EEEEe--------CCEEEEEeccccCCCC
Q 019809 27 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNA---VLVFE--------GRLAVVRAVQHVPKGA 95 (335)
Q Consensus 27 ~~~~~~~~~~~~~~~~N~~~~~~~~~~~~g~~~~~~~s~~nHsC~pn~---~~~~~--------~~~~~~~a~~~i~~g~ 95 (335)
.++.++....++.+.+++|.+.+. -+.++.|.+.++||+|.||. .+.++ ++.++++|.++|++||
T Consensus 158 ~~t~~~f~wA~~~v~SRaf~~~~~----~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Ge 233 (440)
T 2h21_A 158 PVTLDDFFWAFGILRSRAFSRLRN----ENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGE 233 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCBCCC-------CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTS
T ss_pred CCCHHHHHHHHHHhcccceeccCC----CceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCC
Confidence 467889999999999999976542 25799999999999999974 33332 2469999999999999
Q ss_pred eEEEeecCCCCCHHHHHHHHhccCCeEEe
Q 019809 96 EVLISYIETAGSTMTRQKALKEQYLFTCT 124 (335)
Q Consensus 96 el~~~Y~~~~~~~~~R~~~L~~~~~F~C~ 124 (335)
||+|||++... ...|...|||...
T Consensus 234 ei~~sYG~~~~-----N~~LL~~YGFv~~ 257 (440)
T 2h21_A 234 QVYIQYDLNKS-----NAELALDYGFIEP 257 (440)
T ss_dssp BCEECSCTTCC-----HHHHHHHSSCCCS
T ss_pred EEEEeCCCCCC-----HHHHHHhCCCCcC
Confidence 99999997631 1456669999764
No 45
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.59 E-value=2.7e-06 Score=76.17 Aligned_cols=129 Identities=10% Similarity=0.033 Sum_probs=101.8
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 273 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~ 273 (335)
+......+++++|+..+++++.+... .+.....+.+..+++.+|...|++++|+.++++++...+.. |..++..+..
T Consensus 122 ~~~~~~~~~~~~Ai~~~~~al~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~ 198 (293)
T 3u3w_A 122 AAYVLKKVDYEYCILELKKLLNQQLT--GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKV 198 (293)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHTCCC--CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHH
T ss_pred HHHHHcccCHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHH
Confidence 33345667999999999998875322 22233456778999999999999999999999999987654 5688889999
Q ss_pred HHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 274 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 274 l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
++++|.++..+|++++|+.++.+|+++.... .+++....+...+..+...+.
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999988765 244555666666666666555
No 46
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.58 E-value=2.4e-06 Score=71.74 Aligned_cols=121 Identities=11% Similarity=0.062 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChh----------HHHHHHHHHHHHHhchhHHHHHHHHH
Q 019809 184 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN----------LMQTREKLIKILMELEDWKEALAYCQ 253 (335)
Q Consensus 184 ~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~----------l~~~~~~L~~~~~~~~~~~~Al~~~~ 253 (335)
......+...+..+...|++++|+..|.+++.+... .+.... ...++.+++.++...|+|++|+.++.
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 35 VQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH--TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 344556677788888999999999999999875322 111111 13677889999999999999999999
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHH
Q 019809 254 LTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 319 (335)
Q Consensus 254 ~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l 319 (335)
+++.. .|.....++++|.++..+|++++|+.+|++|+.+ .|+++.....+..+
T Consensus 113 ~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~~ 165 (198)
T 2fbn_A 113 KVLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASL-----NPNNLDIRNSYELC 165 (198)
T ss_dssp HHHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCHHHHHHHHHH
T ss_pred HHHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHHHHHHHH
Confidence 99875 3444567899999999999999999999999986 56666554443333
No 47
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.56 E-value=3.4e-06 Score=70.17 Aligned_cols=113 Identities=8% Similarity=0.047 Sum_probs=93.0
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+......|++++|...+++++.+.... ...+....++.+++.++...|++++|++++.+++...+ -.|..++
T Consensus 28 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~ 104 (203)
T 3gw4_A 28 ARFMLGYVYAFMDRFDEARASFQALQQQAQKS--GDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLA-SLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HSCCCHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCccHH
Confidence 34445556667899999999999998876543 23456678889999999999999999999999999887 3454445
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..+..++++|.++..+|++++|+.++++|+.+.+..
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999999999986543
No 48
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.54 E-value=2.3e-06 Score=67.76 Aligned_cols=111 Identities=20% Similarity=0.167 Sum_probs=92.2
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|...+++++.+.... +.......+...++.++...|++++|++++++++...+.. ..++
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~ 126 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRI 126 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cchH
Confidence 34455666778899999999999988875443 2344557788899999999999999999999999887654 3567
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
..+..+..+|.++..+|++++|+.++++|+++.+.
T Consensus 127 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 127 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999998764
No 49
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.54 E-value=2.9e-06 Score=78.69 Aligned_cols=134 Identities=10% Similarity=0.099 Sum_probs=104.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
......+......|++++|+..+++++.+.... +......+.+...++.+|...|++++|++++.+++++.+.. +..
T Consensus 142 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~ 218 (378)
T 3q15_A 142 EFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QND 218 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCH
Confidence 344455666678899999999999998876542 22234678889999999999999999999999999988765 455
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
+..+..+++||.++..+|++++|+.++.+|+.+.+..- +|....+...+..+...+.
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~~g 275 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCKAG 275 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHHCC
Confidence 67888999999999999999999999999999988763 3444555555555544433
No 50
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.53 E-value=5.9e-06 Score=64.33 Aligned_cols=100 Identities=13% Similarity=0.113 Sum_probs=81.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++... |
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--------p 74 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALELD--------G 74 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------T
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhh-----CcCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------c
Confidence 3455566677889999999999998775 3444 4567889999999999999999999988742 3
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
.....++.+|.++..+|++++|+..+++|+.+-...
T Consensus 75 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 75 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 344578999999999999999999999999987653
No 51
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.52 E-value=2e-06 Score=77.11 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=95.6
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+..+...|++++|+..+++++...... +..+.....++.+++.+|..+|++++|+.++.+++++.... ..++
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~ 233 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMA 233 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHH
Confidence 34555666778899999999999998865443 34566778899999999999999999999999999987654 4667
Q ss_pred HHHHHHHHHhHHHHhcCC-hHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGD-TENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~-~~eA~~~l~~A~~il~~~ 304 (335)
..+..++++|.++..+|+ +++|+.++++|+.+.+..
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 789999999999999995 699999999999999865
No 52
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.51 E-value=3.2e-06 Score=75.70 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=96.6
Q ss_pred HhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH-HHH
Q 019809 195 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GLQ 273 (335)
Q Consensus 195 ~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~-~~~ 273 (335)
......|++++|+..+++++...... ......+.+..+++.+|...|++++|+.++.+++...+.. | ..+.. ...
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~-~-~~~~~~~~~ 198 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQLTG--IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-H-DNEEFDVKV 198 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCCCS--SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-C-CCHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-C-ccccchHHH
Confidence 33456678899998888887654332 2233456788999999999999999999999999987754 3 23433 378
Q ss_pred HHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhccc
Q 019809 274 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 329 (335)
Q Consensus 274 l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~~ 329 (335)
++++|.++..+|++++|+.++++|+.+... ..++.....+...+..+...+...
T Consensus 199 ~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~ 252 (293)
T 2qfc_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCR--INSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCSSHHHHHHHHHHHHHHTTCC
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999843 345555666666666665555443
No 53
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.50 E-value=3.3e-06 Score=75.63 Aligned_cols=113 Identities=19% Similarity=0.145 Sum_probs=93.0
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhH-HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l-~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
......+..+...|++++|+..+++++.+.... +.+... ..++.+++.+|..+|+|++|+.++++++.+... ...
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~ 231 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR--INS 231 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTB
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCc
Confidence 344556666778899999999999998765432 223332 378899999999999999999999999998753 456
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHH-HHHHHHHHHhhhhh
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRIT 304 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA-~~~l~~A~~il~~~ 304 (335)
+...+..++++|.++..+|++++| ..++++|+.+.+..
T Consensus 232 ~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 232 MALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp CSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 777899999999999999999999 88899999998765
No 54
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.50 E-value=5.8e-06 Score=61.88 Aligned_cols=110 Identities=23% Similarity=0.225 Sum_probs=84.7
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..+...+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----~---- 68 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKL-----DPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL----K---- 68 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----C----
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh----C----
Confidence 34555666777889999999999988764 3444 345677889999999999999999998874 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 318 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~ 318 (335)
|.....++.+|.++...|++++|+.++++++.+ .|+++.....+..
T Consensus 69 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~l~~ 114 (118)
T 1elw_A 69 PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH-----EANNPQLKEGLQN 114 (118)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc-----CCCCHHHHHHHHH
Confidence 223456889999999999999999999999864 5677655544433
No 55
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.48 E-value=3.3e-06 Score=74.00 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=95.3
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..++..+..+...|++++|+..+++++. ..|.++....++..++.++...|+|++|+..+++++... +.+
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~-----~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----p~~ 85 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFT-----YGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY-----QID 85 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGG-----GCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-----CCC
Confidence 3456677778889999999999998865 357777778889999999999999999999999988743 456
Q ss_pred hHHHHHHHHHhHHHHh--------cCChHHHHHHHHHHHHhhhhhcCCCChhHHHHH
Q 019809 268 PLLGLQYYTCGKLEWF--------LGDTENAIKSMTEAVEILRITHGTNSPFMKELI 316 (335)
Q Consensus 268 p~~~~~l~~La~l~~~--------~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~ 316 (335)
|.....++.+|.++.. +|++++|+..|++++.. -|+++......
T Consensus 86 ~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~ 137 (261)
T 3qky_A 86 PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDAT 137 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHH
T ss_pred chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHH
Confidence 7788899999999999 99999999999999885 36677666555
No 56
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.46 E-value=5.1e-06 Score=77.61 Aligned_cols=127 Identities=14% Similarity=0.173 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcc--------cCCCChhHHHHHHHHHHHHHhchhHHHHHHH
Q 019809 180 IKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL--------YHPFSVNLMQTREKLIKILMELEDWKEALAY 251 (335)
Q Consensus 180 ~~~~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~--------l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~ 251 (335)
..........+...+..+...|++++|+..|++++++.... ....++....++.+++.+|..+++|++|+.+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 33445556667778888889999999999999998743221 0012445567889999999999999999999
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHH
Q 019809 252 CQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 319 (335)
Q Consensus 252 ~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l 319 (335)
+++++.. .|..+..++++|.++..+|++++|+..|++|+++ .|+++.....+..+
T Consensus 296 ~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l-----~P~~~~~~~~l~~~ 350 (370)
T 1ihg_A 296 CLEALEI--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI-----APEDKAIQAELLKV 350 (370)
T ss_dssp HHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHH
T ss_pred HHHHHHh--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Confidence 9999873 3455677999999999999999999999999986 45666554443333
No 57
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.46 E-value=4.4e-06 Score=77.50 Aligned_cols=111 Identities=11% Similarity=0.002 Sum_probs=93.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|+..+++++.+.... +.......++.+++.+|...|++++|++++.+++.+.+.. .+|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~ 258 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPD 258 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CCh
Confidence 34455666678899999999999998876543 2334667889999999999999999999999999988776 445
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..+..+++||.++..+|++++|+.++++|+.+....
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 667889999999999999999999999999987654
No 58
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.45 E-value=7.2e-06 Score=73.52 Aligned_cols=127 Identities=12% Similarity=-0.034 Sum_probs=95.6
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 273 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~ 273 (335)
+..+...|++++|+..|.+++.+.... + +......++.+++.+|..+|++++|+.++++++.++... +..+..+..
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~ 119 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKA-G-NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR--GQFRRGANF 119 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHH
Confidence 334557899999999999998876543 2 234557888999999999999999999999999987653 334455778
Q ss_pred HHHHhHHHHhc-CChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 274 YYTCGKLEWFL-GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 274 l~~La~l~~~~-g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
+.++|.++... |++++|+.+|++|+++.... | +++...++...+..+..++
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~-~-~~~~~~~~~~~lg~~~~~~ 171 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQD-Q-SVALSNKCFIKCADLKALD 171 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC-C-ChHHHHHHHHHHHHHHHHh
Confidence 99999999996 99999999999999987642 2 1222234555555554433
No 59
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.44 E-value=7e-06 Score=76.22 Aligned_cols=133 Identities=11% Similarity=0.065 Sum_probs=106.9
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChh-HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 264 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~-l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p 264 (335)
....+...+..+...|++++|+..+++++.+ .|.+.. ...++..++.+|...|++++|+.++++++...+..
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-- 119 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM-- 119 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--
Confidence 3445566777778899999999999998875 455543 45788899999999999999999999999988766
Q ss_pred CCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 265 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 265 ~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
.++|..+..++.+|.++...|++++|+.++.+|+.+.... .+++....+...+..+...+.
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g 180 (411)
T 4a1s_A 120 NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAKG 180 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHcC
Confidence 5678899999999999999999999999999999998776 245555555555555544433
No 60
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.42 E-value=5.5e-06 Score=78.56 Aligned_cols=117 Identities=10% Similarity=0.059 Sum_probs=96.3
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhccc-CCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLY-HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l-~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
.+......|++++|++.+++++++..... ...++..+.++.+++.+|..+|++++|+.++.+++.+.+.+.++.++..+
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 34445678999999999999988754432 23466777889999999999999999999999999999999989999888
Q ss_pred HHHHHHhHHHHhc--CChHHHHHHHHHHHHhhhhhcCCCChhHHH
Q 019809 272 LQYYTCGKLEWFL--GDTENAIKSMTEAVEILRITHGTNSPFMKE 314 (335)
Q Consensus 272 ~~l~~La~l~~~~--g~~~eA~~~l~~A~~il~~~~G~~hp~~~~ 314 (335)
..+.++|..+... +++++|+..|++|+.+ .|++|....
T Consensus 137 ~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~-----~p~~~~~~~ 176 (472)
T 4g1t_A 137 ELDCEEGWTRLKCGGNQNERAKVCFEKALEK-----KPKNPEFTS 176 (472)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-----STTCHHHHH
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHh-----CCCCHHHHH
Confidence 8888888776654 5689999999999986 577776543
No 61
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.41 E-value=2.5e-06 Score=86.62 Aligned_cols=91 Identities=21% Similarity=0.256 Sum_probs=41.5
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|+..|++++++ .|.+ ..++.+|+.+|..+|++++|+.++++++++ .|..+.
T Consensus 15 LG~~~~~~G~~~eAi~~~~kAl~l-----~P~~---~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~~~ 78 (723)
T 4gyw_A 15 LANIKREQGNIEEAVRLYRKALEV-----FPEF---AAAHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTFAD 78 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHH
Confidence 333444455555555555555442 2222 233444555555555555555555544432 122233
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
.+++||.++..+|++++|+..|++|++
T Consensus 79 a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 79 AYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444444444444444444444444444
No 62
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.41 E-value=4e-06 Score=67.60 Aligned_cols=108 Identities=10% Similarity=-0.065 Sum_probs=85.4
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
+..+..+...|++++|+..+++++++ .|.+ ..++..++.+|...|++++|+.++++++++ .+.+
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~--- 98 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINV-----QERD---PKAHRFLGLLYELEENTDKAVECYRRSVEL-----NPTQ--- 98 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCchHHHHHHHHHHHHh-----CCCC---
Confidence 34556667889999999999999874 4555 456788999999999999999999998874 2333
Q ss_pred HHHHHHHhHHHHhcCChHHHHH-HHHHHHHhhhhhcCCCChhHHHHHHHH
Q 019809 271 GLQYYTCGKLEWFLGDTENAIK-SMTEAVEILRITHGTNSPFMKELILKL 319 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~-~l~~A~~il~~~~G~~hp~~~~l~~~l 319 (335)
...+++||.++...|++++|.. ++++|+.+ -|+||.+..+...|
T Consensus 99 ~~~~~~la~~~~~~~~~~~aa~~~~~~al~l-----~P~~~~~~~l~~~l 143 (150)
T 4ga2_A 99 KDLVLKIAELLCKNDVTDGRAKYWVERAAKL-----FPGSPAVYKLKEQL 143 (150)
T ss_dssp HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH-----STTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHh-----CcCCHHHHHHHHHH
Confidence 4568999999999999987665 56899875 68899887766655
No 63
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.41 E-value=2e-06 Score=65.99 Aligned_cols=103 Identities=13% Similarity=0.111 Sum_probs=78.1
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhH
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 279 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~ 279 (335)
.|++++|+..+++++++ ++.++....++..++.+|...|++++|+.++++++.. .| .+ ...++++|.
T Consensus 3 ~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~----~p-~~---~~~~~~l~~ 69 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ----FP-NH---QALRVFYAM 69 (117)
T ss_dssp ----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT-TC---HHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC-Cc---hHHHHHHHH
Confidence 46788899998888653 2335666788899999999999999999999998864 23 33 467889999
Q ss_pred HHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHH
Q 019809 280 LEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 280 l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~ 320 (335)
++..+|++++|+..+++|+.+ .|++|.+......+.
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAE-----TSDDETIQSYKQAIL 105 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH-----HCCCHHHHHTHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCcHHHHHHHHHHH
Confidence 999999999999999999875 466776655444443
No 64
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.41 E-value=4.4e-06 Score=73.15 Aligned_cols=117 Identities=9% Similarity=0.071 Sum_probs=94.4
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHH--------------HHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCC
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTR--------------EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 265 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~--------------~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~ 265 (335)
.|++++|+..+++++.. .|.+.....+. ..++.+|...|+|++|+..+++++.. + +
T Consensus 110 ~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~----~-p 179 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDA----Y-P 179 (261)
T ss_dssp CHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C-T
T ss_pred chhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH----C-C
Confidence 78899999999888764 45565555555 78899999999999999999998863 3 3
Q ss_pred CChHHHHHHHHHhHHHHhc----------CChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhccccc
Q 019809 266 FHPLLGLQYYTCGKLEWFL----------GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKLS 331 (335)
Q Consensus 266 ~hp~~~~~l~~La~l~~~~----------g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~~~~ 331 (335)
.++.....++.+|.++..+ |++++|+..+++++... |+||.+.+....+..+..++.....
T Consensus 180 ~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~~~~~~~~~~~ 250 (261)
T 3qky_A 180 DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF-----PDSPLLRTAEELYTRARQRLTELEG 250 (261)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC-----TTCTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHHHHHHhhh
Confidence 5666777889999999877 88899999999998753 8999999999988888776655443
No 65
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.40 E-value=9e-06 Score=67.56 Aligned_cols=113 Identities=11% Similarity=0.045 Sum_probs=92.2
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|...+++++.+... .+........++.+++.++...|++++|+.++++++...+.. ...+
T Consensus 68 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 144 (203)
T 3gw4_A 68 ALHQVGMVERMAGNWDAARRCFLEERELLAS-LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA--DDQV 144 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--cchH
Confidence 3445566667889999999999999887653 332333667888999999999999999999999999876543 3345
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..+..+..+|.++..+|++++|+.++++|+++.+..
T Consensus 145 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 145 AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 567788999999999999999999999999998776
No 66
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.38 E-value=1.2e-05 Score=73.99 Aligned_cols=136 Identities=19% Similarity=0.150 Sum_probs=108.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|...+++++.+.... +.+.....++..++.++...|++++|+.++++++.+.... ..++
T Consensus 229 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~ 304 (406)
T 3sf4_A 229 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRI 304 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc--CCcH
Confidence 34445566678899999999999988765442 3345667888899999999999999999999999887764 3467
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcccc
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKL 330 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~~~ 330 (335)
..+..+..+|.++..+|++++|+.++++|+.+.... | +.+....+...+.++...++...
T Consensus 305 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~g~~~ 364 (406)
T 3sf4_A 305 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV-G-DKSGELTARLNLSDLQMVLGLSY 364 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-c-CCcchhHHHHHHHHHHHHhhHhH
Confidence 778899999999999999999999999999998776 3 44556667777777776666543
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.37 E-value=2.4e-05 Score=62.60 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC
Q 019809 185 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 264 (335)
Q Consensus 185 ~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p 264 (335)
.....+...+..+...|++++|...+++++.. .|.+ ..+...++.++...|+|++|+.++.+++...
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~----- 77 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIELD----- 77 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----
Confidence 34455666777788899999999999998764 3333 4567788999999999999999999988752
Q ss_pred CCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHH
Q 019809 265 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 313 (335)
Q Consensus 265 ~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~ 313 (335)
|.....++.+|.++..+|++++|+.++.+|+.+ .|+++...
T Consensus 78 ---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~~~~ 118 (166)
T 1a17_A 78 ---KKYIKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDAK 118 (166)
T ss_dssp ---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHHH
T ss_pred ---cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCHHHH
Confidence 333467899999999999999999999999875 45555443
No 68
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.37 E-value=1.3e-05 Score=68.01 Aligned_cols=106 Identities=11% Similarity=0.161 Sum_probs=83.4
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHH----------------HHHHHHhchhHHHHHHH
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREK----------------LIKILMELEDWKEALAY 251 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~----------------L~~~~~~~~~~~~Al~~ 251 (335)
..++..+..+...|++++|+..+++++.+. +.-..++.. ++.+|...|++++|+..
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALN--------IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLF 76 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHH
Confidence 445667777788999999999999987752 222233344 99999999999999999
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHH
Q 019809 252 CQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 314 (335)
Q Consensus 252 ~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~ 314 (335)
+++++.. +|.-...++++|.++...|++++|+..|++|+.+ .|+++....
T Consensus 77 ~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~~~a~~ 126 (208)
T 3urz_A 77 YKELLQK--------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQL-----EADNLAANI 126 (208)
T ss_dssp HHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred HHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCCHHHHH
Confidence 9998874 2333467899999999999999999999999985 577765543
No 69
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.37 E-value=1.8e-05 Score=70.32 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=101.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChh-HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~-l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
.+...+..+...|++++|+..+++++.. .|.++. ...++..++.++...|++++|++++++++...+.. +.+
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 79 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQ 79 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--ccc
Confidence 3445566677889999999999998875 445543 45788899999999999999999999999988766 567
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 325 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~e 325 (335)
|..+..+..+|.++...|++++|+.++.+|+.+.... ++++....+...+..+...
T Consensus 80 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~ 135 (338)
T 3ro2_A 80 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHA 135 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999998875 2334444444455444433
No 70
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.37 E-value=8.4e-06 Score=75.71 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=103.9
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.+.... ........++..++.+|...|++++|+.++++++...... ..++.
T Consensus 226 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~ 301 (411)
T 4a1s_A 226 CGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL--GEREV 301 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc--CCHHH
Confidence 3445556678899999999999998875542 2344556788899999999999999999999999988765 45667
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
.+..+..+|.++..+|++++|+.++++|+.+.... .+++....+...+..+...++
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g 357 (411)
T 4a1s_A 302 EAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL--GDRIGEARACWSLGNAHSAIG 357 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999999999999998776 234455555666666554443
No 71
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.36 E-value=2.2e-05 Score=59.68 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 187 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 187 ~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
.......+......|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++.+++.. .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----~--- 76 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIEL-----NPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICI----D--- 76 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C---
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhhchHHHHHHHHHHHhc----C---
Confidence 344455666677889999999999988764 3333 445778899999999999999999998874 2
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
|.....++.+|.++...|++++|+.++++|+.+ .|+++..
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~ 116 (131)
T 2vyi_A 77 -PAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL-----DPDNETY 116 (131)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHH
T ss_pred -ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CccchHH
Confidence 233457899999999999999999999999986 4555543
No 72
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.36 E-value=8.8e-06 Score=62.47 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=77.9
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..+...+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .
T Consensus 17 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~----~---- 80 (133)
T 2lni_A 17 LMVKNKGNECFQKGDYPQAMKHYTEAIKR-----NPKD---AKLYSNRAACYTKLLEFQLALKDCEECIQL----E---- 80 (133)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH----C----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh----C----
Confidence 34455566677889999999999888653 3434 456778999999999999999999998874 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
|.....++.+|.++..+|++++|+.++++++.+
T Consensus 81 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 81 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 233457899999999999999999999999986
No 73
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.34 E-value=2.9e-06 Score=80.52 Aligned_cols=89 Identities=9% Similarity=-0.076 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC-CCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCC
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 307 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p-~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~ 307 (335)
+.+++.|+.++..+|++++|++++++++++.+...+ ..+|..+..+.++|.++..+|++++|+.++++|+.|.....++
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc
Confidence 456778999999999999999999999999988877 5689999999999999999999999999999999999988887
Q ss_pred CChhHHHHHH
Q 019809 308 NSPFMKELIL 317 (335)
Q Consensus 308 ~hp~~~~l~~ 317 (335)
.++...++..
T Consensus 131 ~~~~~~~~~~ 140 (472)
T 4g1t_A 131 YRIESPELDC 140 (472)
T ss_dssp SCCCCHHHHH
T ss_pred cchhhHHHHH
Confidence 7665444433
No 74
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.32 E-value=1e-05 Score=74.40 Aligned_cols=115 Identities=13% Similarity=0.135 Sum_probs=87.9
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccC--C-----CChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH--P-----FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 258 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~--~-----~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~ 258 (335)
........+..+...|++++|+..|++++.+...... . .+.....++.+++.+|..+|+|++|+.++.+++..
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3445566777778889999999999999875321100 0 01223577889999999999999999999999875
Q ss_pred HHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHH
Q 019809 259 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 313 (335)
Q Consensus 259 ~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~ 313 (335)
.|.....++++|.++..+|++++|+..|++|+.+ .|+++...
T Consensus 226 --------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~~a~ 267 (336)
T 1p5q_A 226 --------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL-----YPNNKAAK 267 (336)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSCHHHH
T ss_pred --------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CCCCHHHH
Confidence 2344567899999999999999999999999986 45555433
No 75
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.32 E-value=2e-05 Score=72.50 Aligned_cols=127 Identities=16% Similarity=0.135 Sum_probs=101.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChh-HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~-l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
+...+..+...|++++|+..+++++.+ .|.++. ...++..++.++...|++++|+.++++++...+.. .++|
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 84 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQL 84 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--cccH
Confidence 445566677889999999999998875 445543 46788899999999999999999999999988765 5678
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHH
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 325 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~e 325 (335)
..+..+..+|.++...|++++|+.++.+|+.+..... +.+....+...+..+...
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~ 139 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHA 139 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--cccchHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999988763 334444455555444433
No 76
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.30 E-value=1.6e-05 Score=68.16 Aligned_cols=119 Identities=18% Similarity=0.162 Sum_probs=90.7
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.++..+..+...|++++|+..+++++.. .|.++....++..++.+|...|+|++|+..+++++.. +| .++
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~----~P-~~~ 75 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL----NP-THP 75 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT-TCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH----Cc-CCC
Confidence 3455666777889999999999988763 5666666778889999999999999999999988853 34 567
Q ss_pred HHHHHHHHHhHHHHh------------------cCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHH
Q 019809 269 LLGLQYYTCGKLEWF------------------LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 322 (335)
Q Consensus 269 ~~~~~l~~La~l~~~------------------~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~ 322 (335)
.....++.+|.++.. +|++++|+..|++++.. -|+++...+....+..+
T Consensus 76 ~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~P~~~~a~~a~~~l~~~ 142 (225)
T 2yhc_A 76 NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG-----YPNSQYTTDATKRLVFL 142 (225)
T ss_dssp THHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT-----CTTCTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH-----CcCChhHHHHHHHHHHH
Confidence 666778888888765 56788888888888764 36777766655544443
No 77
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.29 E-value=2.5e-05 Score=71.84 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=93.4
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
...+..+...|++++|...+++++.+.... ........+...++.++...|++++|+.++++++...+...+..+|..
T Consensus 57 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 57 SVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 344445567799999999999988865442 222344667788999999999999999999999999988877778999
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
+..+.++|.++...|++++|+.++.+|+.+....
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 168 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY 168 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999987653
No 78
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.29 E-value=1.9e-05 Score=70.08 Aligned_cols=132 Identities=14% Similarity=0.081 Sum_probs=102.7
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
...+..+...|++++|+..+++++.+.... +.+.....+...++.++...|++++|+.++++++...... ..++..
T Consensus 187 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~ 262 (338)
T 3ro2_A 187 GNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVE 262 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh--cchhHH
Confidence 344555667799999999999988765442 2345566788899999999999999999999999887764 456777
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcc
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~ 328 (335)
+..+..+|.++...|++++|..++++|+.+..... +++....+...+..+...++.
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~~g~ 318 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTALGN 318 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999999999999999987652 244445555666666544443
No 79
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.29 E-value=1e-05 Score=74.04 Aligned_cols=117 Identities=14% Similarity=0.142 Sum_probs=86.8
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++++ .|.+ ..++..++.++...|++++|+.++++++.. +|.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~ 279 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTV-----RPED---YSLWNRLGATLANGDRSEEAVEAYTRALEI--------QPG 279 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCC
Confidence 344455566779999999999998764 3444 346778999999999999999999998875 344
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH----HHHHHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM----KELILKLEEA 322 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~----~~l~~~l~~~ 322 (335)
....++++|.++..+|++++|+.+|++|+.+.....|+.|+.. ..+...|..+
T Consensus 280 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 336 (365)
T 4eqf_A 280 FIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIA 336 (365)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHH
Confidence 5678899999999999999999999999999998888766543 2344444444
No 80
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.28 E-value=1.8e-05 Score=71.38 Aligned_cols=111 Identities=10% Similarity=0.020 Sum_probs=87.6
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+..+...|++++|+..+++++.+.... + .......++.+++.+|.. |++++|+.++++++++++.. ...+
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g-~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~--~~~~ 152 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN-G-TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE--ERLR 152 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT-T-CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC--CChh
Confidence 33444555667789999999999998875432 1 123456788899999988 99999999999999988752 2334
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..+..+.++|.++..+|++++|+.+|++|+.+....
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 557789999999999999999999999999987654
No 81
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.28 E-value=1.5e-05 Score=71.99 Aligned_cols=126 Identities=15% Similarity=0.101 Sum_probs=96.4
Q ss_pred HhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Q 019809 195 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 274 (335)
Q Consensus 195 ~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l 274 (335)
..+...|++++|+..+.+++.+.... + .......++.+++.+|..+|++++|+.++++++.++... ......+..+
T Consensus 44 ~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~ 119 (307)
T 2ifu_A 44 VAFKNAKQLEQAKDAYLQEAEAHANN-R-SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN--GTPDTAAMAL 119 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT--TCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHH
Confidence 34557789999999999998876543 2 234557788999999999999999999999999987642 3344567899
Q ss_pred HHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhc
Q 019809 275 YTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 275 ~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~ 327 (335)
.++|.++.. |++++|+.+|++|+++.... | +.+....+...+..+...+.
T Consensus 120 ~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~-~-~~~~~~~~~~~lg~~~~~~g 169 (307)
T 2ifu_A 120 DRAGKLMEP-LDLSKAVHLYQQAAAVFENE-E-RLRQAAELIGKASRLLVRQQ 169 (307)
T ss_dssp HHHHHHHTT-TCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHc-CCHHHHHHHHHHHHHHHHhC-C-ChhHHHHHHHHHHHHHHHcC
Confidence 999999998 99999999999999998763 3 22334455566665554443
No 82
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.28 E-value=5.5e-06 Score=64.24 Aligned_cols=94 Identities=11% Similarity=-0.056 Sum_probs=75.6
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
+..+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+..+++++.. .+.++
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~-- 85 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQK-----EPER---EEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKDI-- 85 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH--
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH--
Confidence 34455666889999999999998764 4444 445678999999999999999999998874 23344
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..++.||.++...|++++|+..+++++.+
T Consensus 86 -~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 86 -AVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999864
No 83
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.26 E-value=9.5e-06 Score=82.40 Aligned_cols=104 Identities=20% Similarity=0.213 Sum_probs=85.9
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
......+..+...|++++|+..|++++++ .|.+ ..++.+|+.++..+|++++|++++++++++ .
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l-----~P~~---~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~ 107 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRI-----SPTF---ADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------N 107 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 34455667778889999999999999875 3444 567889999999999999999999999874 3
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
|..+..+++||.++..+|++++|+..|++|+++ .|+++..
T Consensus 108 P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l-----~P~~~~a 147 (723)
T 4gyw_A 108 PAFADAHSNLASIHKDSGNIPEAIASYRTALKL-----KPDFPDA 147 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHH
Confidence 555678999999999999999999999999985 4566543
No 84
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.25 E-value=5e-05 Score=57.10 Aligned_cols=103 Identities=22% Similarity=0.303 Sum_probs=78.8
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..++++... .|.+ ..+...++.++...|++++|+.++++++.. .| .+
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----~~-~~-- 76 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----DP-NN-- 76 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT-TC--
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh----CC-cc--
Confidence 344455566788999999999988764 2333 345678899999999999999999988764 22 23
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 313 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~ 313 (335)
...++.+|.++...|++++|+.++++++.+ .|+++...
T Consensus 77 -~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~ 114 (125)
T 1na0_A 77 -AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNNAEAK 114 (125)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCcHHHH
Confidence 456789999999999999999999999875 45555433
No 85
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.24 E-value=1.2e-05 Score=62.90 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCC
Q 019809 228 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 307 (335)
Q Consensus 228 l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~ 307 (335)
.+.+..+|+..+...|+|++|++++.+++++ +|..+..++++|.++..+|++++|+..+.+|+.+-... .+
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~-~~ 77 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET-RA 77 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-ch
Confidence 4556678999999999999999999999875 34456778999999999999999999999999986543 44
Q ss_pred CChhHHHHHHHHHHHHHHh
Q 019809 308 NSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 308 ~hp~~~~l~~~l~~~~~el 326 (335)
.++....+...+..+...+
T Consensus 78 ~~~~~a~~~~~lg~~~~~~ 96 (127)
T 4gcn_A 78 DYKLIAKAMSRAGNAFQKQ 96 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHc
Confidence 5555555555555554443
No 86
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.22 E-value=5e-06 Score=80.32 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=83.7
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|+..|++++++ +|.+ ..++.+++.+|..+|++++|++++++++.. +|..+.
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--------~p~~~~ 75 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIEL--------DKKYIK 75 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCCHH
Confidence 344556788999999999999875 3444 566788999999999999999999999875 455567
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHH
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 316 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~ 316 (335)
.++++|.++..+|++++|+..+++|+++ .|+++.....+
T Consensus 76 ~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~~~~~~~l 114 (477)
T 1wao_1 76 GYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDAKMKY 114 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCTTHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHH
Confidence 8999999999999999999999999986 45665544433
No 87
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.20 E-value=1.9e-05 Score=75.70 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=84.6
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhccc--C-----CCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY--H-----PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 258 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l--~-----~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~ 258 (335)
........+..+...|++++|+..|++++.+....- . ..+.....++.+++.+|..+++|++|+.++.+++.+
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 345566677788889999999999999987532210 0 001233577889999999999999999999999874
Q ss_pred HHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 259 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 259 ~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
. |.....++++|.++..+|++++|+..|++|+.+
T Consensus 347 ~--------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 347 D--------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp S--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred C--------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 2 334577999999999999999999999999985
No 88
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.18 E-value=6.1e-05 Score=67.73 Aligned_cols=114 Identities=17% Similarity=0.163 Sum_probs=88.7
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChh-HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~-l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
...+..+...|++++|+..+++++.. .|.+.. ...+...++.++...|++++|+.++.+++.. +|.
T Consensus 238 ~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~ 304 (359)
T 3ieg_A 238 IESAEELIRDGRYTDATSKYESVMKT-----EPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM--------EPD 304 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------Ccc
Confidence 34466677889999999999988764 344443 3466778999999999999999999998875 333
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 322 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~ 322 (335)
....++.+|.++...|++++|+..+++|+++ .|+++.....+..+...
T Consensus 305 ~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~-----~p~~~~~~~~l~~~~~~ 352 (359)
T 3ieg_A 305 NVNALKDRAEAYLIEEMYDEAIQDYEAAQEH-----NENDQQIREGLEKAQRL 352 (359)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHH
Confidence 4567899999999999999999999999975 57777665555444443
No 89
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.17 E-value=9.7e-05 Score=67.80 Aligned_cols=127 Identities=13% Similarity=0.046 Sum_probs=98.6
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCCh-hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~-~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
..+......|++++|...+++++... ++.+. ....+...++.++...|++++|..++++++...+.. +.....
T Consensus 19 ~~a~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~ 92 (373)
T 1hz4_A 19 LRAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYA 92 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHH
Confidence 34445567899999999999887642 23332 345677888999999999999999999999887763 233455
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHH
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 324 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~ 324 (335)
+..+.++|.++..+|++++|+.++++|+.+.....++.+|....+...+..+..
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 146 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW 146 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999998888777766666555555543
No 90
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.17 E-value=5e-05 Score=67.76 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=80.9
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+..+...|++++|+..|++++.. .|.+ ..++.+++.+|...|++++|+.++++++.. +|
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p 69 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALEL--------DG 69 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CC
Confidence 3455666777889999999999998774 4444 345778999999999999999999998863 34
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 302 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~ 302 (335)
.....++++|.++..+|++++|+..|++|+.+--
T Consensus 70 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 4456789999999999999999999999998654
No 91
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.16 E-value=2.7e-05 Score=63.92 Aligned_cols=91 Identities=18% Similarity=0.116 Sum_probs=71.4
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 273 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~ 273 (335)
+......++++.+...+.++..+ .|.+. .+...++.++..+|++++|++.+++++.. +|.....
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~~---~~~~~lg~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~ 143 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVYA---DAYYKLGLVYDSMGEHDKAIEAYEKTISI--------KPGFIRA 143 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHHhCCchhHHHHHHHHHHh--------cchhhhH
Confidence 34445667888888887777653 34443 45667889999999999999999998864 3444567
Q ss_pred HHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 274 YYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 274 l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
++++|.++..+|++++|+..|++|+++
T Consensus 144 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 144 YQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 899999999999999999999999875
No 92
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.16 E-value=6.9e-05 Score=67.00 Aligned_cols=110 Identities=16% Similarity=0.115 Sum_probs=86.7
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~-~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
..+.+.+..+...|++++|+..+++++.+.... + .......++.+++.+|... |++++|+.++++++.+.... ..
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g-~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~--~~ 153 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR-G-QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD--QS 153 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC--CC
Confidence 344556666778899999999999998876432 1 1233467788999999996 99999999999999877632 12
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
++..+..+.++|.++..+|++++|+.+|++|+.+.
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 23345678999999999999999999999999865
No 93
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.16 E-value=1.1e-05 Score=64.85 Aligned_cols=93 Identities=14% Similarity=0.058 Sum_probs=71.0
Q ss_pred hcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHh
Q 019809 199 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 278 (335)
Q Consensus 199 ~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La 278 (335)
+.|++++|+..++++.. .++.-......++.+|...|+|++|++++++++.+ +|.-...++.+|
T Consensus 9 ~~~~~e~ai~~~~~a~~--------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~lg 72 (150)
T 4ga2_A 9 SKADVERYIASVQGSTP--------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPKAHRFLG 72 (150)
T ss_dssp CHHHHHHHHHHHHHHSC--------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHH
T ss_pred HcChHHHHHHHHHHhcc--------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHH
Confidence 44566777766665532 23333445678999999999999999999999874 233456789999
Q ss_pred HHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 279 KLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 279 ~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
.++..+|++++|+..|++|+++ .|+++..
T Consensus 73 ~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 101 (150)
T 4ga2_A 73 LLYELEENTDKAVECYRRSVEL-----NPTQKDL 101 (150)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHcCchHHHHHHHHHHHHh-----CCCCHHH
Confidence 9999999999999999999986 5666543
No 94
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.13 E-value=4.8e-05 Score=69.21 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=91.6
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
...+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++.. +|..
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~ 284 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSV-----RPND---YLLWNKLGATLANGNQSEEAVAAYRRALEL--------QPGY 284 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCc
Confidence 34455566789999999999988764 3444 346778999999999999999999998874 3444
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC---ChhHHHHHHHHHHHHHHhcc
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN---SPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~---hp~~~~l~~~l~~~~~el~~ 328 (335)
...++.+|.++..+|++++|+.++++|+.+.....|+. ++....+...+..+...++.
T Consensus 285 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 345 (368)
T 1fch_A 285 IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQ 345 (368)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 56789999999999999999999999999877664443 44455566666666555543
No 95
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.10 E-value=5.9e-05 Score=64.24 Aligned_cols=114 Identities=18% Similarity=0.105 Sum_probs=85.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCCh----hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV----NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 264 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~----~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p 264 (335)
.....+..+...|++++|+..+++++++ .|.+. .+..++..++.++...|++++|++++++++..
T Consensus 78 ~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------ 146 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEYIATLTEGIKA-----VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV------ 146 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc------
Confidence 3445566667889999999999998764 34444 23466788999999999999999999998874
Q ss_pred CCChH--HHHHHHHHhHHHHhcCCh---------------------------HHHHHHHHHHHHhhhhhcCCCChhHHHH
Q 019809 265 QFHPL--LGLQYYTCGKLEWFLGDT---------------------------ENAIKSMTEAVEILRITHGTNSPFMKEL 315 (335)
Q Consensus 265 ~~hp~--~~~~l~~La~l~~~~g~~---------------------------~eA~~~l~~A~~il~~~~G~~hp~~~~l 315 (335)
+|. ....++++|.++..+|+. ++|+.++++|+++ .|+++.+..+
T Consensus 147 --~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p~~~~~~~~ 219 (228)
T 4i17_A 147 --TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTL-----SPNRTEIKQM 219 (228)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHH
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCHHHHHH
Confidence 566 667788888888877776 7777777777764 6788766666
Q ss_pred HHHHH
Q 019809 316 ILKLE 320 (335)
Q Consensus 316 ~~~l~ 320 (335)
+..+.
T Consensus 220 l~~i~ 224 (228)
T 4i17_A 220 QDQVK 224 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 96
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.08 E-value=4.5e-05 Score=65.09 Aligned_cols=96 Identities=17% Similarity=0.097 Sum_probs=74.0
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc-----------hhHHHHHHHHHHHHHH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----------EDWKEALAYCQLTIPV 258 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~-----------~~~~~Al~~~~~~l~~ 258 (335)
....+..+...|++++|+..+++++++ .|.+ ..++..++.++... |++++|+..+++++..
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 113 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVAR-----TPRY---LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV 113 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh
Confidence 344555667789999999999998774 4444 34567888999999 9999999999998874
Q ss_pred HHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 259 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 259 ~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
.|.-...++++|.++..+|++++|+..|++|+++-
T Consensus 114 --------~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 114 --------NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred --------CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 23334556788888888888888888888888764
No 97
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.08 E-value=2.3e-05 Score=72.04 Aligned_cols=123 Identities=13% Similarity=0.174 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhccc--CCC-------ChhHHHHHHHHHHHHHhchhHHHHHHHHHH
Q 019809 184 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY--HPF-------SVNLMQTREKLIKILMELEDWKEALAYCQL 254 (335)
Q Consensus 184 ~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l--~~~-------h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~ 254 (335)
......+...+..+...|++++|+..|++++.+..... ... ......++.+++.+|..+++|++|+.++.+
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34455667788888899999999999999877532100 000 000113678899999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHH
Q 019809 255 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 319 (335)
Q Consensus 255 ~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l 319 (335)
++.. +|.....++++|.++..+|++++|+..|++|+.+ .|+++.....+..+
T Consensus 256 al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l-----~p~~~~a~~~L~~l 307 (338)
T 2if4_A 256 VLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY-----APDDKAIRRELRAL 307 (338)
T ss_dssp HHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHH
Confidence 9874 2344567899999999999999999999999875 35555544443333
No 98
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.00011 Score=62.90 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=86.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++.+++... |.
T Consensus 142 ~~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--------~~ 205 (258)
T 3uq3_A 142 ARLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEKD--------PN 205 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-----Cccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC--------HH
Confidence 344555667889999999999998764 3334 3557789999999999999999999988742 33
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 321 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~ 321 (335)
....++.+|.++..+|++++|..++++|+.+..... +.|...++...|..
T Consensus 206 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 206 FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYK 255 (258)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHH
Confidence 356788999999999999999999999999875442 33444455555543
No 99
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.05 E-value=0.0001 Score=60.22 Aligned_cols=116 Identities=7% Similarity=0.009 Sum_probs=88.4
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHH-HHhchhH--HHHHHHHHHHHHHHHHhcCC
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKI-LMELEDW--KEALAYCQLTIPVYQRVYPQ 265 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~-~~~~~~~--~~Al~~~~~~l~~~~~~~p~ 265 (335)
.....+..+...|++++|+..+++++.+. |.+. .+...++.+ +...|++ ++|+.++.+++.. . +
T Consensus 46 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~----~-p 112 (177)
T 2e2e_A 46 QWALLGEYYLWQNDYSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL----D-S 112 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH----C-T
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh----C-C
Confidence 34445566678899999999999987653 3443 356678888 7889998 9999999988864 2 2
Q ss_pred CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHH
Q 019809 266 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 325 (335)
Q Consensus 266 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~e 325 (335)
.+ ...++.+|.++...|++++|+.++++|+.+ .|+++....+...+..++.-
T Consensus 113 ~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~i~~~~~~ 164 (177)
T 2e2e_A 113 NE---ITALMLLASDAFMQANYAQAIELWQKVMDL-----NSPRINRTQLVESINMAKLL 164 (177)
T ss_dssp TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----CCTTSCHHHHHHHHHHHHHH
T ss_pred Cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHhh-----CCCCccHHHHHHHHHHHHHh
Confidence 33 456889999999999999999999999875 45566677777777766543
No 100
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.03 E-value=9.5e-05 Score=63.29 Aligned_cols=104 Identities=10% Similarity=0.087 Sum_probs=86.8
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 187 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 187 ~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
...+...+..+...|++++|+..+++++... .+ ..++..++.++...|++++|+.++.+++...... ++.
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~------~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~ 74 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH------KD---ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREM-RAD 74 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh------cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-ccc
Confidence 4456667777788999999999999988753 22 3456788999999999999999999999876543 446
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
++..+..++.+|.++...|++++|+.++++++.+
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 6777889999999999999999999999999985
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.03 E-value=0.00022 Score=60.91 Aligned_cols=127 Identities=9% Similarity=-0.001 Sum_probs=93.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh------------------chhHHHHHH
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME------------------LEDWKEALA 250 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~------------------~~~~~~Al~ 250 (335)
..+..+..+...|++++|+..++++++ ..|.+.....++..++.++.. .|++++|+.
T Consensus 43 a~~~lg~~~~~~~~~~~A~~~~~~~l~-----~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 117 (225)
T 2yhc_A 43 VQLDLIYAYYKNADLPLAQAAIDRFIR-----LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFS 117 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHH-----HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHH
Confidence 345556667788999999999999876 356777666667777777654 679999999
Q ss_pred HHHHHHHHHHHhcCCCChHHH--------------HHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHH
Q 019809 251 YCQLTIPVYQRVYPQFHPLLG--------------LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 316 (335)
Q Consensus 251 ~~~~~l~~~~~~~p~~hp~~~--------------~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~ 316 (335)
.+++++.. +| .++... ...+.+|.++...|++.+|+..|+++++.. |++|...+..
T Consensus 118 ~~~~~l~~----~P-~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~ 187 (225)
T 2yhc_A 118 DFSKLVRG----YP-NSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDAL 187 (225)
T ss_dssp HHHHHHTT----CT-TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHH
T ss_pred HHHHHHHH----Cc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHH
Confidence 98887753 34 334322 222577889999999999999999998864 5677777777
Q ss_pred HHHHHHHHHhcccc
Q 019809 317 LKLEEAQAEASYKL 330 (335)
Q Consensus 317 ~~l~~~~~el~~~~ 330 (335)
..+..+..++....
T Consensus 188 ~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 188 PLMENAYRQMQMNA 201 (225)
T ss_dssp HHHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCcH
Confidence 77777766665443
No 102
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.03 E-value=5.2e-05 Score=57.43 Aligned_cols=104 Identities=18% Similarity=0.171 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhc
Q 019809 205 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL 284 (335)
Q Consensus 205 ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~ 284 (335)
+++..++++++ ..|.+. .++..++.++...|++++|+.++++++.. .|..+..++.+|.++..+
T Consensus 3 ~a~~~~~~al~-----~~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLA-----QGTDNM---LLRFTLGKTYAEHEQFDAALPHLRAALDF--------DPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHT-----TTCCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCcH---HHHHHHHHHHHHccCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHc
Confidence 34555555543 344443 46778999999999999999999998864 233355789999999999
Q ss_pred CChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 285 GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 285 g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
|++++|+..|++|+.+.... | +.....++...+..+....
T Consensus 67 g~~~~A~~~~~~al~~~~~~-~-~~~~~~~l~~~l~~l~~~~ 106 (115)
T 2kat_A 67 GDRAGARQAWESGLAAAQSR-G-DQQVVKELQVFLRRLARED 106 (115)
T ss_dssp TCHHHHHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccc-c-cHHHHHHHHHHHHHhcccc
Confidence 99999999999999875443 2 2233455556666555443
No 103
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.03 E-value=3.5e-05 Score=56.97 Aligned_cols=93 Identities=17% Similarity=0.098 Sum_probs=73.0
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 273 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~ 273 (335)
+..+...|++++|+..+++++.+ .|.+ ..+...++.++...|++++|+.++++++.. .| . ......
T Consensus 13 ~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----~~-~-~~~~~~ 78 (112)
T 2kck_A 13 GVLQYDAGNYTESIDLFEKAIQL-----DPEE---SKYWLMKGKALYNLERYEEAVDCYNYVINV----IE-D-EYNKDV 78 (112)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----SC-C-TTCHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh----Cc-c-cchHHH
Confidence 34456788999999999988764 3333 345678899999999999999999988864 22 2 113456
Q ss_pred HHHHhHHHHhc-CChHHHHHHHHHHHHh
Q 019809 274 YYTCGKLEWFL-GDTENAIKSMTEAVEI 300 (335)
Q Consensus 274 l~~La~l~~~~-g~~~eA~~~l~~A~~i 300 (335)
++.+|.++..+ |++++|+.++++++..
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 89999999999 9999999999998763
No 104
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.02 E-value=4.5e-05 Score=65.13 Aligned_cols=103 Identities=15% Similarity=0.099 Sum_probs=81.5
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..++++++ ..|.+ ..++..++.++...|++++|+.++++++... |.
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~-----~~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--------P~ 71 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALK-----ENPQD---PEALYWLARTQLKLGLVNPALENGKTLVART--------PR 71 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHT-----TSSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CC
Confidence 34455666788999999999998865 34555 4457789999999999999999999988742 33
Q ss_pred HHHHHHHHhHHHHhc-----------CChHHHHHHHHHHHHhhhhhcCCCChhHH
Q 019809 270 LGLQYYTCGKLEWFL-----------GDTENAIKSMTEAVEILRITHGTNSPFMK 313 (335)
Q Consensus 270 ~~~~l~~La~l~~~~-----------g~~~eA~~~l~~A~~il~~~~G~~hp~~~ 313 (335)
....++++|.++..+ |++++|+..+++|+++ .|+++...
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~P~~~~~~ 121 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV-----NPRYAPLH 121 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh-----CcccHHHH
Confidence 446688999999999 9999999999999986 56665443
No 105
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.00 E-value=0.0001 Score=63.26 Aligned_cols=91 Identities=14% Similarity=0.083 Sum_probs=40.2
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|++++++++.. .|....
T Consensus 43 ~a~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~ 106 (252)
T 2ho1_A 43 LGLGYLQRGNTEQAKVPLRKALEI-----DPSS---ADAHAALAVVFQTEMEPKLADEEYRKALAS--------DSRNAR 106 (252)
T ss_dssp HHHHHHHTTCTGGGHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhc-----CCCh---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHH
Confidence 333344455555555555554432 1111 233344445555555555555555544432 111123
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
.++.+|.++...|++++|+.++++++.
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 344444444444444444444444443
No 106
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.99 E-value=3.1e-05 Score=70.45 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=90.5
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhc---CCC
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY---PQF 266 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~---p~~ 266 (335)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++....... +..
T Consensus 254 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 325 (368)
T 1fch_A 254 WNKLGATLANGNQSEEAVAAYRRALEL-----QPGY---IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEG 325 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------C
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccc
Confidence 344555667789999999999998764 3434 35678899999999999999999999998776552 234
Q ss_pred ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 267 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
+|..+..+..||.++..+|++++|...+.++++++...+|.+
T Consensus 326 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~ 367 (368)
T 1fch_A 326 GAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLP 367 (368)
T ss_dssp CCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHHHTTCC
T ss_pred cchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHHhcCCC
Confidence 666788899999999999999999999999999999988854
No 107
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.99 E-value=0.00019 Score=59.92 Aligned_cols=93 Identities=11% Similarity=0.033 Sum_probs=57.7
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~-~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
+..+...|++++|...+++++.. .|.+ ..+...++.++... |++++|+.++++++. .+.+|....
T Consensus 49 ~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~ 114 (225)
T 2vq2_A 49 AEIYQYLKVNDKAQESFRQALSI-----KPDS---AEINNNYGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYI 114 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHH
Confidence 34445556667776666666543 2223 23445566677777 777777777666654 234455556
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++.+|.++...|++++|+.++.+++.+
T Consensus 115 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 115 ANLNKGICSAKQGQFGLAEAYLKRSLAA 142 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 6677777777777777777777777653
No 108
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.98 E-value=7e-05 Score=62.78 Aligned_cols=104 Identities=10% Similarity=-0.058 Sum_probs=81.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhc------
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY------ 263 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~------ 263 (335)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++......-
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 111 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINR-----DKHL---AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKI 111 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 344556667889999999999998765 3333 45678899999999999999999999886432100
Q ss_pred -C-CCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 264 -P-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 264 -p-~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
+ ..+|.....++++|.++..+|++++|+..+++|+.+.
T Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 112 LGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp GTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred hccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 0 1456677889999999999999999999999998763
No 109
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.97 E-value=6.3e-05 Score=58.63 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=64.0
Q ss_pred CChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 224 FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 224 ~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
-+|.......+++..+...|+|++|++++.+++.. .|.-...++++|.++..+|++++|+..+++|+.+
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--- 76 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL--- 76 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh---
Confidence 36778888889999999999999999999998864 2344567899999999999999999999999985
Q ss_pred hcCCCChhH
Q 019809 304 THGTNSPFM 312 (335)
Q Consensus 304 ~~G~~hp~~ 312 (335)
.|+++..
T Consensus 77 --~p~~~~a 83 (126)
T 4gco_A 77 --DSKFIKG 83 (126)
T ss_dssp --CTTCHHH
T ss_pred --hhhhhHH
Confidence 5566543
No 110
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.96 E-value=0.00027 Score=66.10 Aligned_cols=113 Identities=17% Similarity=0.168 Sum_probs=88.9
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhH-HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l-~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
...+..+...|++++|+..+++++.+ .|.++.. ..++..++.++...|++++|+.++++++.. +|.
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~p~ 327 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM--------EPD 327 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------Ccc
Confidence 33466677889999999999988763 4555443 567888999999999999999999998864 344
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 321 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~ 321 (335)
.+..++.+|.++...|++++|+..+++|+++ .|+++.....+..+..
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~~~~ 374 (450)
T 2y4t_A 328 NVNALKDRAEAYLIEEMYDEAIQDYETAQEH-----NENDQQIREGLEKAQR 374 (450)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----SSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CcchHHHHHHHHHHHH
Confidence 4577899999999999999999999999884 5777766655554433
No 111
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.94 E-value=8.3e-05 Score=63.29 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=81.6
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.++..+..+...|++++|+..+++++.+.. +.+. .+...++.++...|++++|+.++.+++. ..|
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~----~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~--------~~p 73 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTN----NQDS---VTAYNCGVCADNIKKYKEAADYFDIAIK--------KNY 73 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTT----TCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHH--------TTC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccC----CCCc---HHHHHHHHHHHHhhcHHHHHHHHHHHHH--------hCc
Confidence 455667777888999999999999887531 1333 3456689999999999999999999885 344
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCCh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 310 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp 310 (335)
.....++.+|.++..+|++++|+..+++|+.+ .|+++
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~ 110 (228)
T 4i17_A 74 NLANAYIGKSAAYRDMKNNQEYIATLTEGIKA-----VPGNA 110 (228)
T ss_dssp SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcH
Confidence 56677899999999999999999999999875 35555
No 112
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.94 E-value=0.00014 Score=60.89 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=76.9
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
..+..+..+...|++++|+..++++ +.+ + ..++..++.++...|++++|+.++.+++... |
T Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~a-------~~~-~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--------~ 68 (213)
T 1hh8_A 8 SLWNEGVLAADKKDWKGALDAFSAV-------QDP-H---SRICFNIGCMYTILKNMTEAEKAFTRSINRD--------K 68 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTS-------SSC-C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------T
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH-------cCC-C---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------c
Confidence 4556677777889999999888765 222 2 3577889999999999999999999988752 3
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
.....++++|.++..+|++++|+..+++|+.+.
T Consensus 69 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 69 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 345678999999999999999999999999864
No 113
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=97.93 E-value=8.5e-06 Score=66.21 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=38.1
Q ss_pred cccccccCCcc---CcEEEEeCCEEEEEeccccCCCCeEEEeecCCCC
Q 019809 62 VISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAG 106 (335)
Q Consensus 62 ~~s~~nHsC~p---n~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~~ 106 (335)
.+.++||+|.+ |+...-.++.+.++|+|+|++||||++-|.+.+.
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC---
T ss_pred ceeEEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEecCHHHH
Confidence 35688999975 9988778899999999999999999999998774
No 114
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.93 E-value=0.00019 Score=61.62 Aligned_cols=94 Identities=9% Similarity=0.050 Sum_probs=60.3
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|...+++++.. .|.+ ..+...++.++...|++++|++++++++. .+.+|....
T Consensus 77 la~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~ 142 (252)
T 2ho1_A 77 LAVVFQTEMEPKLADEEYRKALAS-----DSRN---ARVLNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSR 142 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHH
Confidence 344445667777777777776553 2222 33455667777777777777777776665 234555566
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++.+|.++...|++++|+.++.+++.+
T Consensus 143 ~~~~la~~~~~~g~~~~A~~~~~~~~~~ 170 (252)
T 2ho1_A 143 VFENLGLVSLQMKKPAQAKEYFEKSLRL 170 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 6677777777777777777777777654
No 115
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.92 E-value=0.00013 Score=63.36 Aligned_cols=98 Identities=15% Similarity=0.050 Sum_probs=71.5
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
++..+..+...|++++|+..++++++. .|.+.. +...++.++...|++++|+.++.+++. .|.....
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~---~~~~l~~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~ 72 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAK-----KYNSPY---IYNRRAVCYYELAKYDLAQKDIETYFS-----KVNATKA 72 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHT-----TCCCST---THHHHHHHHHHTTCHHHHHHHHHHHHT-----TSCTTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHHHhhHHHHHHHHHHHHh-----ccCchhH
Confidence 345566667788888888888887653 333432 355677788888889888888888775 2333333
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.+..++.+|.++...|++++|+.++++|+.+
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 4677888888888888888888888888874
No 116
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.90 E-value=0.0003 Score=53.22 Aligned_cols=91 Identities=24% Similarity=0.335 Sum_probs=67.4
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 273 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~ 273 (335)
+..+...|++++|...++++... .|.+ ..+...++.++...|++++|+.++.+++.. .| . ....
T Consensus 8 ~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----~~-~---~~~~ 71 (136)
T 2fo7_A 8 GNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----DP-R---SAEA 71 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----CT-T---CHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHc-----CCcc---hhHHHHHHHHHHHhcCHHHHHHHHHHHHHH----CC-C---chHH
Confidence 44455668889999888887654 2333 344566888888889999999988887753 22 2 2345
Q ss_pred HHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 274 YYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 274 l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
++.+|.++...|++++|+.++.+++.+
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 778899999999999999999988875
No 117
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.90 E-value=0.00013 Score=63.29 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=80.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
......+..+...|++++|+..+++++.+ .|.+. .++..++.++...|++++|+.++++++.. .|
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~----~~--- 108 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAI-----RPDMP---EVFNYLGIYLTQAGNFDAAYEAFDSVLEL----DP--- 108 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT---
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHc-----CCCcH---HHHHHHHHHHHHccCHHHHHHHHHHHHhc----Cc---
Confidence 33445566677889999999999998774 34443 45678999999999999999999998874 22
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCCh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 310 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp 310 (335)
.....++.+|.++...|++++|+.++++++.+ .|+++
T Consensus 109 -~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~ 145 (275)
T 1xnf_A 109 -TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD-----DPNDP 145 (275)
T ss_dssp -TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH
T ss_pred -cccHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCh
Confidence 22467889999999999999999999999874 45555
No 118
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.89 E-value=0.00029 Score=56.66 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=69.6
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|...++++... .|.+ ..+...++.++...|++++|+.++.+++.. +|....
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~ 111 (186)
T 3as5_A 48 LGIAYVKTGAVDRGTELLERSLAD-----APDN---VKVATVLGLTYVQVQKYDLAVPLLIKVAEA--------NPINFN 111 (186)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcHhHH
Confidence 344455678899999888887764 3333 344667888888899999999998887764 223345
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++.+|.++...|++++|+.++++++.+
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 6788899999999999999999998875
No 119
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.87 E-value=0.00029 Score=58.85 Aligned_cols=94 Identities=10% Similarity=-0.007 Sum_probs=71.3
Q ss_pred HHHhhhhc-CChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 193 KTLALTSC-GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 193 ~a~~~~~~-g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
.+..+... |++++|+..+++++. .+.++....+...++.++...|++++|+.++.+++.. .| .+ .
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~----~~-~~---~ 147 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA----QP-QF---P 147 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----ST-TC---H
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC-CC---c
Confidence 34445677 888888888887754 2344555667788889999999999999988887763 22 23 4
Q ss_pred HHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 272 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..++.+|.++...|++++|..++++++.+
T Consensus 148 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 148 PAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 56788899999999999999999998874
No 120
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.87 E-value=0.00012 Score=65.17 Aligned_cols=100 Identities=10% Similarity=0.050 Sum_probs=80.4
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC-hHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH-PLLG 271 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h-p~~~ 271 (335)
.+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.......+... |...
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 236 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSI-----APED---PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWE 236 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHH
Confidence 445556778999999998887653 3444 355678899999999999999999999998776655333 4556
Q ss_pred HHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 272 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..++.+|.++...|++++|+.++++|+.+
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 67899999999999999999999999986
No 121
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.87 E-value=0.00012 Score=65.68 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=84.1
Q ss_pred hcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHh
Q 019809 199 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 278 (335)
Q Consensus 199 ~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La 278 (335)
..|++++|...+++++.. .|.+ ..++.+++.++..+|+|++|..++++++.. .+.+|. .++++|
T Consensus 178 ~~~~~~eA~~~~~~~l~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~---~l~~l~ 241 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADK-----CSPT---LLLLNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPE---TLINLV 241 (291)
T ss_dssp CTTHHHHHHHHHHHHHHH-----SCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH---HHHHHH
T ss_pred CchHHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHH
Confidence 347888888888887764 3444 345677888999999999999999988863 245554 478999
Q ss_pred HHHHhcCChHH-HHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhccc
Q 019809 279 KLEWFLGDTEN-AIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 329 (335)
Q Consensus 279 ~l~~~~g~~~e-A~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~~ 329 (335)
.++..+|+..+ +..+++++++ ..|+||.+.++..+-..-..-....
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~-----~~P~~~~~~d~~~~~~~fd~~~~~~ 288 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKD-----AHRSHPFIKEYRAKENDFDRLVLQY 288 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH-----HCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHHHHHc
Confidence 99999999976 5678888875 4799999999988877766554433
No 122
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.86 E-value=4.6e-05 Score=69.63 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=88.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.+ +|.+ ..++..++.+|...|++++|+.++++++.......++.++.
T Consensus 250 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 321 (365)
T 4eqf_A 250 WNRLGATLANGDRSEEAVEAYTRALEI-----QPGF---IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVP 321 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCc---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccc
Confidence 344555667789999999999998775 3444 55678899999999999999999999999988777765554
Q ss_pred H----HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCC
Q 019809 270 L----GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 309 (335)
Q Consensus 270 ~----~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~h 309 (335)
. +..+..|+.++...|+.+.|.....+++++++..+|.++
T Consensus 322 ~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~l~~~~~~~~~~~ 365 (365)
T 4eqf_A 322 HPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLDP 365 (365)
T ss_dssp -----CHHHHHHHHHHHHHTCHHHHHHHHTTCCGGGTTTTTCC-
T ss_pred hhhhHHHHHHHHHHHHHHcCcHHHHHHHHHhhHHHHHHhcCCCC
Confidence 3 567889999999999999999999999999999999763
No 123
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.86 E-value=9.9e-05 Score=54.79 Aligned_cols=68 Identities=26% Similarity=0.256 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..++..++.+|...|++++|+.++++++.. .| .+ ...++.||.++..+|++++|+..|++|+.+-...
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----~p-~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVET----DP-DY---VGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----ST-TC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC-Cc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 345778999999999999999999998874 22 23 3478999999999999999999999999986543
No 124
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.85 E-value=0.00026 Score=63.54 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=79.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
..+...+..+...|++++|+..+++++.. .|.++ .+...++.++...|++++|+.++++++.. .
T Consensus 4 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~---~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~ 67 (359)
T 3ieg_A 4 EKHLELGKKLLAAGQLADALSQFHAAVDG-----DPDNY---IAYYRRATVFLAMGKSKAALPDLTKVIAL--------K 67 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CcccH---HHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Confidence 44566677778899999999999998764 44443 46778999999999999999999998865 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
|.....++.+|.++...|++++|+..+++++.+
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 100 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS 100 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 333467899999999999999999999999875
No 125
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.83 E-value=0.00046 Score=61.17 Aligned_cols=121 Identities=12% Similarity=0.005 Sum_probs=86.4
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++... |.
T Consensus 175 ~~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~ 238 (327)
T 3cv0_A 175 HASLGVLYNLSNNYDSAAANLRRAVEL-----RPDD---AQLWNKLGATLANGNRPQEALDAYNRALDIN--------PG 238 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TT
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CC
Confidence 344555566789999999999988764 3444 3456788999999999999999999887642 33
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCCh----hHHHHHHHHHHHHHHh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP----FMKELILKLEEAQAEA 326 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp----~~~~l~~~l~~~~~el 326 (335)
....++.+|.++..+|++++|+.++++|+.+.....++.+. ....+...+..+...+
T Consensus 239 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 299 (327)
T 3cv0_A 239 YVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVM 299 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhc
Confidence 34568899999999999999999999999876554333321 1344445555554433
No 126
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.82 E-value=0.00026 Score=59.79 Aligned_cols=115 Identities=18% Similarity=0.138 Sum_probs=79.3
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH---
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL--- 269 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~--- 269 (335)
.+..+...|++++|+..+++++++ .|.+. .++..++.++...|++++|+.++++++... | .++.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~----P-~~~~a~~ 126 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK-----APNNV---DCLEACAEMQVCRGQEKDALRMYEKILQLE----A-DNLAANI 126 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC----T-TCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC----C-CCHHHHH
Confidence 566667889999999999998874 45554 557789999999999999999999988642 2 2221
Q ss_pred -HHH----------------------------HHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHH
Q 019809 270 -LGL----------------------------QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 270 -~~~----------------------------~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~ 320 (335)
+|. .++++|..+...|++++|+..|++|+.+. |+ +.....+..+.
T Consensus 127 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~-----P~-~~~~~~l~~i~ 200 (208)
T 3urz_A 127 FLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF-----PS-TEAQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS-----CC-HHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CC-HHHHHHHHHHH
Confidence 121 23334445555677888888888887653 33 33455566666
Q ss_pred HHHHHh
Q 019809 321 EAQAEA 326 (335)
Q Consensus 321 ~~~~el 326 (335)
+++.++
T Consensus 201 ~~~~~~ 206 (208)
T 3urz_A 201 RIEKEV 206 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666654
No 127
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.81 E-value=0.00036 Score=52.78 Aligned_cols=92 Identities=24% Similarity=0.330 Sum_probs=71.6
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|...++++... .|.+ ..+...++.++...|++++|+.++.+++.. .| .+ ..
T Consensus 41 ~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~----~~-~~---~~ 104 (136)
T 2fo7_A 41 LGNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----DP-RS---AE 104 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH----CT-TC---HH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHH-----CCCc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----CC-CC---hH
Confidence 344455678999999999887654 3333 345667889999999999999999988763 22 22 35
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++.+|.++...|++++|+.++.+++.+
T Consensus 105 ~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 105 AWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 6788999999999999999999999875
No 128
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.81 E-value=0.00028 Score=50.27 Aligned_cols=72 Identities=24% Similarity=0.344 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
..+...++.++...|++++|+.++++++.. .|.....++.+|.++...|++++|+.++++|+.+ .|+
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~p~ 75 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPN 75 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCC
Confidence 456678889999999999999999998864 2333467889999999999999999999999986 455
Q ss_pred ChhHH
Q 019809 309 SPFMK 313 (335)
Q Consensus 309 hp~~~ 313 (335)
++...
T Consensus 76 ~~~~~ 80 (91)
T 1na3_A 76 NAEAK 80 (91)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 65443
No 129
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.81 E-value=1.9e-05 Score=65.25 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=37.5
Q ss_pred ccccccCCc---cCcEEEEeCCEEEEEeccccCCCCeEEEeecCCCC
Q 019809 63 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAG 106 (335)
Q Consensus 63 ~s~~nHsC~---pn~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~~ 106 (335)
+.++||+|. +|+...-.++.+.++|+|+|++|+||++-|.+.+.
T Consensus 102 mR~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 102 MTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC---
T ss_pred eeeEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 467899997 89988778899999999999999999999998764
No 130
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.80 E-value=0.00017 Score=64.07 Aligned_cols=113 Identities=15% Similarity=0.210 Sum_probs=85.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCC-hhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h-~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
....+..+...|++++|+..+++++......-.+.. +....+...++.++...|++++|+.++++++... |
T Consensus 196 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--------~ 267 (330)
T 3hym_B 196 MHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI--------P 267 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------T
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC--------c
Confidence 344555667789999999999999887544333222 2234567789999999999999999999988752 2
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHH
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKEL 315 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l 315 (335)
.....++.+|.++..+|++++|+.++++|+.+ .|+++.....
T Consensus 268 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~ 309 (330)
T 3hym_B 268 QNASTYSAIGYIHSLMGNFENAVDYFHTALGL-----RRDDTFSVTM 309 (330)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTT-----CSCCHHHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHHHHHHHHHcc-----CCCchHHHHH
Confidence 33456889999999999999999999998864 4666654443
No 131
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.79 E-value=0.00016 Score=58.99 Aligned_cols=99 Identities=12% Similarity=0.152 Sum_probs=68.6
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhH----------HHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDW----------KEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~----------~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
.|++|+..++++.++ .|.+ ..++.+++.++..++++ ++|+..++++|.+ .|...
T Consensus 17 ~feeA~~~~~~Ai~l-----~P~~---aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--------dP~~~ 80 (158)
T 1zu2_A 17 LFEQIRQDAENTYKS-----NPLD---ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--------DPKKD 80 (158)
T ss_dssp HHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------CcCcH
Confidence 456677777766553 4444 44566777788877665 4777777776653 23445
Q ss_pred HHHHHHhHHHHhcC-----------ChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHH
Q 019809 272 LQYYTCGKLEWFLG-----------DTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 321 (335)
Q Consensus 272 ~~l~~La~l~~~~g-----------~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~ 321 (335)
..+++||.+|..+| ++++|+.+|++|+++ -|+++.+...++....
T Consensus 81 ~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l-----~P~~~~y~~al~~~~k 136 (158)
T 1zu2_A 81 EAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE-----QPDNTHYLKSLEMTAK 136 (158)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHh
Confidence 66888898888774 899999999999986 6788877766555443
No 132
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00023 Score=52.76 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
......++..+...|+|++|++++++++.. .|.....++++|.++..+|++++|+..+++|+.+ .|+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~ 70 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-----TST 70 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----CSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC
Confidence 345667888999999999999999998874 2233466899999999999999999999999875 344
Q ss_pred C---hhHHHHHHHHHHHHHHhccccc
Q 019809 309 S---PFMKELILKLEEAQAEASYKLS 331 (335)
Q Consensus 309 h---p~~~~l~~~l~~~~~el~~~~~ 331 (335)
+ .....+...+..+...+.....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (111)
T 2l6j_A 71 AEHVAIRSKLQYRLELAQGAVGSVQI 96 (111)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 3 1224455566666665554433
No 133
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.79 E-value=0.00021 Score=70.00 Aligned_cols=95 Identities=17% Similarity=-0.000 Sum_probs=77.3
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++++ .|.+ ..++..++.+|...|++++|++++++++.. +|.
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~ 89 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLAL-----HPGH---PEAVARLGRVRWTQQRHAEAAVLLQQASDA--------APE 89 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTT-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCC
Confidence 344555566778999999999988763 4444 456778999999999999999999998874 233
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
....++++|.++..+|++++|+.+|++|+++
T Consensus 90 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 90 HPGIALWLGHALEDAGQAEAAAAAYTRAHQL 120 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999886
No 134
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.78 E-value=0.00019 Score=68.99 Aligned_cols=94 Identities=12% Similarity=0.019 Sum_probs=76.3
Q ss_pred CChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc--------hhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 201 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL--------EDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 201 g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~--------~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
|++++|+..+++++++ .|.+. .++..++.+|... |++++|+.++++++... +.++..+.
T Consensus 193 g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~ 259 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQM-----DVLDG---RSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD-----RKASSNPD 259 (474)
T ss_dssp HHHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----GGGGGCHH
T ss_pred hhHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC-----CCcccCHH
Confidence 8899999999988774 34443 4577889999988 99999999999998752 11236678
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
.++++|.++..+|++++|+..|++|+.+ .|+++..
T Consensus 260 ~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~~~~a 294 (474)
T 4abn_A 260 LHLNRATLHKYEESYGEALEGFSQAAAL-----DPAWPEP 294 (474)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 8999999999999999999999999986 4666643
No 135
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.77 E-value=0.0004 Score=56.71 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=78.9
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-----------
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ----------- 260 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~----------- 260 (335)
..+......|++++|+..|++++++ .|.+. .++..++.+|...|++++|+..+.+++....
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGS 81 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 4455566778999999999888764 45554 4566788888888888888887766543211
Q ss_pred ----------------HhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHH
Q 019809 261 ----------------RVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 324 (335)
Q Consensus 261 ----------------~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~ 324 (335)
+.. ...|.-...+..+|.++..+|++++|+..|++++++ .|+++ ++...+..+..
T Consensus 82 ~~~~~~~~~~a~~~~~~a~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~-----~p~~~---~~~~~lg~~~~ 152 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAI-ALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI-----KPGFI---RAYQSIGLAYE 152 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH-HhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh-----cchhh---hHHHHHHHHHH
Confidence 000 012333345677788888888888888888888875 34444 44555555555
Q ss_pred Hhccc
Q 019809 325 EASYK 329 (335)
Q Consensus 325 el~~~ 329 (335)
.++..
T Consensus 153 ~~g~~ 157 (184)
T 3vtx_A 153 GKGLR 157 (184)
T ss_dssp HTTCH
T ss_pred HCCCH
Confidence 55443
No 136
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.76 E-value=0.00019 Score=57.83 Aligned_cols=95 Identities=9% Similarity=0.020 Sum_probs=74.1
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++. ..|.+ ..+...++.++...|++++|+.++.+++.. .|.
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~ 74 (186)
T 3as5_A 11 YRDKGISHAKAGRYSQAVMLLEQVYD-----ADAFD---VDVALHLGIAYVKTGAVDRGTELLERSLAD--------APD 74 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTCC-----TTSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH-----hCccC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCC
Confidence 34455556677899999988776543 23333 456778899999999999999999998865 233
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
....++.+|.++...|++++|+.++++++.+
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3466889999999999999999999999886
No 137
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.76 E-value=0.00052 Score=58.14 Aligned_cols=92 Identities=15% Similarity=0.014 Sum_probs=61.3
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|+..++++.+. .|.+. .+...++.++...|++++|+.++++++... |....
T Consensus 97 la~~~~~~~~~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~ 160 (243)
T 2q7f_A 97 AGNVYVVKEMYKEAKDMFEKALRA-----GMENG---DLFYMLGTVLVKLEQPKLALPYLQRAVELN--------ENDTE 160 (243)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----TCCSH---HHHHHHHHHHHHTSCHHHHHHHHHHHHHHC--------TTCHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHhccHHHHHHHHHHHHHhC--------CccHH
Confidence 344455667788888777777653 23332 345567777778888888888877776531 22234
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++.+|.++...|++++|+.++.+++..
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 161 ARFQFGMCLANEGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 5677777787888888888888777664
No 138
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.76 E-value=0.00028 Score=59.87 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=83.5
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
...+..+...|++++|+..++++... .|.+ ..+...++.++...|++++|+.++.+++.. .|..
T Consensus 129 ~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~ 192 (243)
T 2q7f_A 129 YMLGTVLVKLEQPKLALPYLQRAVEL-----NEND---TEARFQFGMCLANEGMLDEALSQFAAVTEQ--------DPGH 192 (243)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------Cccc
Confidence 34455566789999999999988764 3333 345677899999999999999999988764 2233
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHH
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~ 320 (335)
...++.+|.++...|++++|+.++++++.+ .|+++.....+..+.
T Consensus 193 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 193 ADAFYNAGVTYAYKENREKALEMLDKAIDI-----QPDHMLALHAKKLLG 237 (243)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHHH-----CTTCHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHcc-----CcchHHHHHHHHHHH
Confidence 456889999999999999999999999874 577777766655544
No 139
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.75 E-value=0.00012 Score=63.57 Aligned_cols=90 Identities=10% Similarity=-0.018 Sum_probs=72.9
Q ss_pred hcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHh
Q 019809 199 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 278 (335)
Q Consensus 199 ~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La 278 (335)
..+++++|+..++++++. .+..++....+...++.++...|++++|+.++++++.. +|.....++.+|
T Consensus 17 ~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la 84 (275)
T 1xnf_A 17 PTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEVFNYLG 84 (275)
T ss_dssp CCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHHHHHHH
Confidence 446788888888887653 12234566788889999999999999999999998874 233445789999
Q ss_pred HHHHhcCChHHHHHHHHHHHHh
Q 019809 279 KLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 279 ~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++...|++++|+.++++|+.+
T Consensus 85 ~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 85 IYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhc
Confidence 9999999999999999999986
No 140
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.75 E-value=0.00027 Score=65.07 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=46.3
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 277 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~L 277 (335)
...|++++|+..+++++++ .|.+. .+...++.++...|++++|+.++++++.. +|.....++++
T Consensus 282 ~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l 345 (388)
T 1w3b_A 282 KEKGSVAEAEDCYNTALRL-----CPTHA---DSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNL 345 (388)
T ss_dssp HHHSCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHTTTCHHHHHHHHHHHTTS--------CTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhh-----CcccH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHHHHHHH
Confidence 3445555555555554432 22222 23344555555555555555555554431 23444556666
Q ss_pred hHHHHhcCChHHHHHHHHHHHH
Q 019809 278 GKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 278 a~l~~~~g~~~eA~~~l~~A~~ 299 (335)
|.++..+|++++|+..+++|+.
T Consensus 346 ~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 346 ASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHh
Confidence 6666667777777777776665
No 141
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.74 E-value=0.00021 Score=54.63 Aligned_cols=86 Identities=12% Similarity=-0.012 Sum_probs=67.6
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChh
Q 019809 232 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 311 (335)
Q Consensus 232 ~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~ 311 (335)
...++..+...|+|++|+.++.+++.. + +.++.....++.+|.++...|++++|+.++.+++.. .|+++.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~----~-p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~ 74 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLEL----Y-PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDK 74 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH----C-SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH----C-CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCcc
Confidence 456778899999999999999987763 2 467777778899999999999999999999999874 477766
Q ss_pred HHHHHHHHHHHHHHhc
Q 019809 312 MKELILKLEEAQAEAS 327 (335)
Q Consensus 312 ~~~l~~~l~~~~~el~ 327 (335)
..+..-.+..+...+.
T Consensus 75 ~~~~~~~la~~~~~~g 90 (129)
T 2xev_A 75 AAGGLLKLGLSQYGEG 90 (129)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHcC
Confidence 5555556655554443
No 142
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00045 Score=64.41 Aligned_cols=131 Identities=8% Similarity=0.059 Sum_probs=89.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.+...+..+...|++++|.+.+..++.....+ +.+.....++..+..++...|++++|+.+++..+...... ...+
T Consensus 57 al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~ 132 (434)
T 4b4t_Q 57 SILELGQLYVTMGAKDKLREFIPHSTEYMMQF--AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE--KRVF 132 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS--CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS--SCCS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh--CccH
Confidence 34455556667889999999988887765442 1122233445556666667788888888888888877654 3455
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHH
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 325 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~e 325 (335)
..+..+.+||.++..+|++.+|..++.+++.+.... .+++...++...+..+...
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKL--DDKPSLVDVHLLESKVYHK 187 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS--SCSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHHH
Confidence 567778888888888888888888888888776554 2455555555555544433
No 143
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.71 E-value=0.00066 Score=60.49 Aligned_cols=104 Identities=13% Similarity=0.031 Sum_probs=80.9
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH---------
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV--------- 258 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~--------- 258 (335)
..+...+..+...|++++|+..|++++.. .|.+. .++..++.++...|++++|+.++++++..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~~---~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~ 189 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQL-----SNQNG---EIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGL 189 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----TTSCH---HHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHh-----CCcch---hHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHH
Confidence 45667777888999999999999998764 45554 56788999999999999999988876431
Q ss_pred ------------------HHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 259 ------------------YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 259 ------------------~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+++.. ..+|.-...+++||.++...|++++|+..|.+++..
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al-~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQV-AENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCccHHHHHHHH-hcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 11111 114444567899999999999999999999999885
No 144
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.00045 Score=65.49 Aligned_cols=99 Identities=11% Similarity=0.037 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCC
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 265 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~ 265 (335)
.+..+...+..+...|++++|+..|++++... | + ..++..++.++...|++++|+.++.+++..
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p-~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~------- 68 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALELK-----E-D---PVFYSNLSACYVSVGDLKKVVEMSTKALEL------- 68 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-----c-c---HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc-------
Confidence 44566777888889999999999999998753 3 2 456788999999999999999999998863
Q ss_pred CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 266 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 266 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
.|.....++.+|.++..+|++++|+..|++++.+-
T Consensus 69 -~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 103 (514)
T 2gw1_A 69 -KPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNG 103 (514)
T ss_dssp -CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred -ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 23344678899999999999999999999988754
No 145
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.66 E-value=0.00026 Score=62.81 Aligned_cols=112 Identities=12% Similarity=0.029 Sum_probs=87.1
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC---
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF--- 266 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~--- 266 (335)
....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.......+..
T Consensus 209 ~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 280 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDI-----NPGY---VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEA 280 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccc
Confidence 344555566789999999999988764 3333 34567889999999999999999999987654322221
Q ss_pred -ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCC
Q 019809 267 -HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 309 (335)
Q Consensus 267 -hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~h 309 (335)
+......+..+|.++..+|++++|...++++++++...+|-++
T Consensus 281 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~ 324 (327)
T 3cv0_A 281 SREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQS 324 (327)
T ss_dssp CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTTSSC
T ss_pred hhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchhhhHHH
Confidence 2225678899999999999999999999999999998888665
No 146
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.65 E-value=0.00039 Score=63.95 Aligned_cols=87 Identities=23% Similarity=0.242 Sum_probs=46.9
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 019809 197 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 276 (335)
Q Consensus 197 ~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~ 276 (335)
+...|++++|+..++++++. .|.+ ..+...++.++...|++++|++++++++.. +|..+..+++
T Consensus 111 ~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~ 174 (388)
T 1w3b_A 111 LVAAGDMEGAVQAYVSALQY-----NPDL---YCVRSDLGNLLKALGRLEEAKACYLKAIET--------QPNFAVAWSN 174 (388)
T ss_dssp HHHHSCSSHHHHHHHHHHHH-----CTTC---THHHHHHHHHHHTTSCHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHH
Confidence 34445555555555554432 2222 223344555566666666666666655542 2333445566
Q ss_pred HhHHHHhcCChHHHHHHHHHHHH
Q 019809 277 CGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 277 La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
+|.++...|++++|+..+++|+.
T Consensus 175 l~~~~~~~g~~~~A~~~~~~al~ 197 (388)
T 1w3b_A 175 LGCVFNAQGEIWLAIHHFEKAVT 197 (388)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh
Confidence 66666666666666666666655
No 147
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.00098 Score=62.07 Aligned_cols=116 Identities=14% Similarity=-0.017 Sum_probs=95.5
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
..+..+...|++.+|...+..+....... ..+...+.+...++++|...|+|++|..++++++.+.... +..+...+
T Consensus 140 ~la~~~~~~g~~~~A~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~ 216 (434)
T 4b4t_Q 140 KLATLHYQKKQYKDSLALINDLLREFKKL--DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI-YCPTQTVA 216 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTS--SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHH
T ss_pred HHHHHHHHccChHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC-CCchHHHH
Confidence 34555667899999999999887754432 2456778889999999999999999999999999877665 34456678
Q ss_pred HHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCCh
Q 019809 272 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 310 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp 310 (335)
..+..+|.++...+++.+|..++.+|+.+....-..++.
T Consensus 217 ~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~~~~~~~ 255 (434)
T 4b4t_Q 217 ELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSY 255 (434)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHTTTSSCH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 889999999999999999999999999999888666654
No 148
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.62 E-value=0.00032 Score=67.38 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=78.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc---------hhHHHHHHHHHHHHHHH
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL---------EDWKEALAYCQLTIPVY 259 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~---------~~~~~Al~~~~~~l~~~ 259 (335)
.....+..+...|++++|+..+++++++ .|. ..++..++.++... |++++|+.++++++..
T Consensus 139 a~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~----~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~- 208 (474)
T 4abn_A 139 AWNQLGEVYWKKGDVTSAHTCFSGALTH-----CKN----KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM- 208 (474)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTT-----CCC----HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCC----HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-
Confidence 4455666677889999999999988764 343 36788899999999 9999999999998874
Q ss_pred HHhcCCCChHHHHHHHHHhHHHHhc--------CChHHHHHHHHHHHHh
Q 019809 260 QRVYPQFHPLLGLQYYTCGKLEWFL--------GDTENAIKSMTEAVEI 300 (335)
Q Consensus 260 ~~~~p~~hp~~~~~l~~La~l~~~~--------g~~~eA~~~l~~A~~i 300 (335)
.|.-+..+++||.++..+ |++++|+..|++|+.+
T Consensus 209 -------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 209 -------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 244456789999999998 9999999999999987
No 149
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.62 E-value=0.0013 Score=61.42 Aligned_cols=103 Identities=12% Similarity=0.013 Sum_probs=79.4
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHH---------HHHHHHHHhchhHHHHHHHHHHHHHHH
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTR---------EKLIKILMELEDWKEALAYCQLTIPVY 259 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~---------~~L~~~~~~~~~~~~Al~~~~~~l~~~ 259 (335)
.....+..+...|++++|+..+++++.+ .|.+....... ..++.++...|++++|+.++++++.
T Consensus 213 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~-- 285 (450)
T 2y4t_A 213 AFYKISTLYYQLGDHELSLSEVRECLKL-----DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMK-- 285 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--
Confidence 3445566667889999999999988753 45555543333 3348889999999999999999886
Q ss_pred HHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 260 QRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 260 ~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..|.........+..+|.++...|++++|+.++++|+.+
T Consensus 286 --~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 286 --TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp --HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred --cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 345433334668899999999999999999999999986
No 150
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.61 E-value=0.00028 Score=61.16 Aligned_cols=95 Identities=14% Similarity=-0.014 Sum_probs=62.1
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.+..+...|++++|+..+++++.. +++......++..++.++...|++++|+.++.+++.. +|....
T Consensus 43 l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~ 109 (272)
T 3u4t_A 43 RAVCYYELAKYDLAQKDIETYFSK-----VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRLD 109 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTT-----SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhc-----cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccHH
Confidence 334445667888888777776541 1222233556677777888888888888887777763 122234
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.+..+|.++...|++++|+.++++|+.+
T Consensus 110 ~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 110 MYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 5677777777777777777777777664
No 151
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.59 E-value=0.001 Score=64.61 Aligned_cols=112 Identities=13% Similarity=0.050 Sum_probs=85.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChh-HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~-l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
...+..+...|++++|+..++++++..... +.++. ...++..++.+|...|++++|+++++++++.. +.+
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----p~~-- 549 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS-----TND-- 549 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SCC--
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CCC--
Confidence 344555667899999999999887764321 12222 35677889999999999999999999988642 233
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELIL 317 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~ 317 (335)
...++.||.++...|++++|+.++++++++ .|+++.....+.
T Consensus 550 -~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~l~ 591 (597)
T 2xpi_A 550 -ANVHTAIALVYLHKKIPGLAITHLHESLAI-----SPNEIMASDLLK 591 (597)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHH
T ss_pred -hHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCChHHHHHHH
Confidence 467899999999999999999999999985 677776555443
No 152
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.58 E-value=0.00033 Score=56.58 Aligned_cols=75 Identities=9% Similarity=-0.023 Sum_probs=62.6
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
++.-..++..++.++...|++++|+.++++++.. .|.+ ...+++||.++..+|++++|+..|++|+.+
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~---~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l---- 99 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYN---VDYIMGLAAIYQIKEQFQQAADLYAVAFAL---- 99 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHccHHHHHHHHHHHHhh----
Confidence 5666778889999999999999999999998864 2334 456899999999999999999999999985
Q ss_pred cCCCChhH
Q 019809 305 HGTNSPFM 312 (335)
Q Consensus 305 ~G~~hp~~ 312 (335)
.|++|..
T Consensus 100 -~P~~~~~ 106 (151)
T 3gyz_A 100 -GKNDYTP 106 (151)
T ss_dssp -SSSCCHH
T ss_pred -CCCCcHH
Confidence 4666643
No 153
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.58 E-value=0.00079 Score=50.81 Aligned_cols=89 Identities=11% Similarity=0.045 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
......++..+...|++++|+.++.+++... |.....++++|.++...|++++|+.++.+++.+.... +++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~ 74 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD--------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-RED 74 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-chh
Confidence 4556778889999999999999999988742 2234668899999999999999999999999976533 445
Q ss_pred ChhHHHHHHHHHHHHHHh
Q 019809 309 SPFMKELILKLEEAQAEA 326 (335)
Q Consensus 309 hp~~~~l~~~l~~~~~el 326 (335)
++....+...+..+...+
T Consensus 75 ~~~~~~~~~~la~~~~~~ 92 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKE 92 (131)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 554455555555554443
No 154
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.57 E-value=0.00059 Score=52.14 Aligned_cols=64 Identities=19% Similarity=0.067 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
......++..+...|+|++|+.++.+++... |.-...++++|.++..+|++++|+..+++|+.+
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA--------PEDARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4456678889999999999999999988742 333577899999999999999999999999986
No 155
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.55 E-value=0.00049 Score=55.29 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC----------ChHHHHHHHHHhHHHHhcCChHHHHHHHHHH
Q 019809 228 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF----------HPLLGLQYYTCGKLEWFLGDTENAIKSMTEA 297 (335)
Q Consensus 228 l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~----------hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A 297 (335)
.+......+..+...|+|++|+.++.+++.......+.. .|..+..++++|.++..+|++++|+..+.+|
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 455566788899999999999999999999877654322 4666788999999999999999999999999
Q ss_pred HHh
Q 019809 298 VEI 300 (335)
Q Consensus 298 ~~i 300 (335)
+.+
T Consensus 90 l~~ 92 (162)
T 3rkv_A 90 LKR 92 (162)
T ss_dssp HHH
T ss_pred Hhc
Confidence 886
No 156
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=97.52 E-value=7.2e-05 Score=63.07 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=38.2
Q ss_pred ccccccCCc---cCcEEEEeCCEEEEEeccccCCCCeEEEeecCCC
Q 019809 63 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETA 105 (335)
Q Consensus 63 ~s~~nHsC~---pn~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~ 105 (335)
+.++||+|. +|+...-.++.+.++|+|+|++|+||++-|.+.+
T Consensus 132 mRfVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwYg~~Y 177 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDF 177 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHH
T ss_pred EEeEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEecCHHH
Confidence 468899997 7998877889999999999999999999998544
No 157
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.51 E-value=0.00026 Score=57.97 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=73.3
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH----------
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY---------- 259 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~---------- 259 (335)
.+..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++...
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~ 80 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDE-----LQSR---GDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIA 80 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHH-----HHTS---HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHH
Confidence 344555667788999999988877653 3333 4557788889999999999988777654321
Q ss_pred ----HHhcCC------------CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 260 ----QRVYPQ------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 260 ----~~~~p~------------~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
...... .+|.-...++.+|.++...|++++|+..|++++.+
T Consensus 81 ~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 81 KLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 000111 13444567889999999999999999999998764
No 158
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.51 E-value=5e-05 Score=73.26 Aligned_cols=107 Identities=14% Similarity=0.016 Sum_probs=79.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...|++++|+..+++++++ +|.+ ..++.+++.+|..+|++++|++++++++.. .| .++
T Consensus 42 ~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~~---~~~~~~lg~~~~~~g~~~eA~~~~~~al~~----~p-~~~ 108 (477)
T 1wao_1 42 YYGNRSLAYLRTECYGYALGDATRAIEL-----DKKY---IKGYYRRAASNMALGKFRAALRDYETVVKV----KP-HDK 108 (477)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHS-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----ST-TCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC-CCH
Confidence 4455666777889999999999998764 4444 456788999999999999999999998875 23 223
Q ss_pred HHHHHHHHHhHH--HHhcCChHHHHHHHH-----------HHHHhhhhhcCCCChh
Q 019809 269 LLGLQYYTCGKL--EWFLGDTENAIKSMT-----------EAVEILRITHGTNSPF 311 (335)
Q Consensus 269 ~~~~~l~~La~l--~~~~g~~~eA~~~l~-----------~A~~il~~~~G~~hp~ 311 (335)
..+..++.+ +..+|++++|+..++ +|+.+-....|+.++.
T Consensus 109 ---~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 161 (477)
T 1wao_1 109 ---DAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLED 161 (477)
T ss_dssp ---THHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGG
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccccccccc
Confidence 345566666 778899999999999 8888888888888886
No 159
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.51 E-value=0.0018 Score=62.97 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=74.1
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LGLQYYT 276 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~-~~~~l~~ 276 (335)
...|++++|...++++... .|.++ .++..++.+|...|++++|+++++++++..... +..|. .+..+..
T Consensus 452 ~~~g~~~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~ 521 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYAL-----FQYDP---LLLNELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWAN 521 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHH
Confidence 3445666666666555442 33333 346678888899999999999999888766532 33455 3778999
Q ss_pred HhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHH
Q 019809 277 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 314 (335)
Q Consensus 277 La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~ 314 (335)
+|.++...|++++|+.++++++++ +|+++.+..
T Consensus 522 l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~ 554 (597)
T 2xpi_A 522 LGHAYRKLKMYDAAIDALNQGLLL-----STNDANVHT 554 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----SSCCHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHh-----CCCChHHHH
Confidence 999999999999999999999886 466664443
No 160
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.50 E-value=0.00055 Score=64.03 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=45.8
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchh-HHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 019809 197 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 275 (335)
Q Consensus 197 ~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~-~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~ 275 (335)
+...|++++|+..+++++.+ .|.+. .++..++.++..+|+ +++|+.++++++... |.-...++
T Consensus 107 ~~~~g~~~~Al~~~~~al~l-----~P~~~---~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~--------P~~~~a~~ 170 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIEL-----NAANY---TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ--------PKNYQVWH 170 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--------TTCHHHHH
T ss_pred HHHCCChHHHHHHHHHHHHh-----CccCH---HHHHHHHHHHHHcccCHHHHHHHHHHHHHHC--------CCCHHHHH
Confidence 34556667777766666543 33332 334556666666664 666666666665421 22223344
Q ss_pred HHhHHHHhcCChHHHHHHHHHHHH
Q 019809 276 TCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 276 ~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
++|.++..+|++++|+..|++|+.
T Consensus 171 ~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 171 HRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHH
Confidence 455555555555555555554443
No 161
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.50 E-value=0.00081 Score=54.12 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=57.7
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+......+..++..+...|+|++|+.++++++... |.....++++|.++..+|++++|+..+++|+.+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA--------PANPIYLSNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34456677889999999999999999999988742 333567899999999999999999999999986
No 162
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.47 E-value=0.0013 Score=53.62 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCC-----CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 230 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ-----FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 230 ~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~-----~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
....+.+..+...|+|++|+..+++++.+... +|. ..|..+..++++|.++..+|++++|+..+.+|++++-..
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 34456777888999999999999999987654 221 124456799999999999999999999999999984433
No 163
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00011 Score=54.52 Aligned_cols=94 Identities=15% Similarity=0.182 Sum_probs=70.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC-C
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF-H 267 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~-h 267 (335)
.....+..+...|++++|+..+++++.+ .|.+ ..++.+++.++...|++++|+.++++++.. .|.. .
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----~p~~~~ 73 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITA-----QPQN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRY----TSTAEH 73 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS----CSSTTS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----CCCccH
Confidence 4455666777889999999999998874 4444 345778999999999999999999998863 3322 1
Q ss_pred -hHHHHHHHHHhHHHHhcCChHHHHHHH
Q 019809 268 -PLLGLQYYTCGKLEWFLGDTENAIKSM 294 (335)
Q Consensus 268 -p~~~~~l~~La~l~~~~g~~~eA~~~l 294 (335)
...+..++.+|.++..+|++++|+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 74 VAIRSKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHhHH
Confidence 223667888999988888777665543
No 164
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.40 E-value=0.00055 Score=55.67 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=69.5
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 019809 197 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 276 (335)
Q Consensus 197 ~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~ 276 (335)
+...|++++|+..+++++.. .|.+. .+...++.+|...|++++|+.++++++... | .+ ...++.
T Consensus 20 ~~~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~~~~~~A~~~~~~al~~~----p-~~---~~~~~~ 83 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA-----NPQNS---EQWALLGEYYLWQNDYSNSLLAYRQALQLR----G-EN---AELYAA 83 (177)
T ss_dssp CC-----CCCCHHHHHHHHH-----CCSCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH----C-SC---HHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC----C-CC---HHHHHH
Confidence 34567888888888887653 34443 456789999999999999999999988754 3 33 356788
Q ss_pred HhHH-HHhcCCh--HHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 277 CGKL-EWFLGDT--ENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 277 La~l-~~~~g~~--~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
+|.+ +...|++ ++|+.++.+++.+ .|+++..
T Consensus 84 la~~l~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 117 (177)
T 2e2e_A 84 LATVLYYQASQHMTAQTRAMIDKALAL-----DSNEITA 117 (177)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHh-----CCCcHHH
Confidence 9999 7789998 9999999999986 4555543
No 165
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.40 E-value=0.0018 Score=51.65 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=61.0
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
++.-......++..+...|++++|+.++++++.. .+.+ ...++.+|.++..+|++++|+..|++|+.+
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l---- 84 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL-----DHYD---SRFFLGLGACRQAMGQYDLAIHSYSYGAVM---- 84 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc-----Cccc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 3445666788999999999999999999988763 2333 456789999999999999999999999885
Q ss_pred cCCCChhHH
Q 019809 305 HGTNSPFMK 313 (335)
Q Consensus 305 ~G~~hp~~~ 313 (335)
.|++|...
T Consensus 85 -~p~~~~~~ 92 (148)
T 2vgx_A 85 -DIXEPRFP 92 (148)
T ss_dssp -STTCTHHH
T ss_pred -CCCCchHH
Confidence 46666543
No 166
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.0028 Score=59.96 Aligned_cols=116 Identities=15% Similarity=0.104 Sum_probs=85.3
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME---LEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~---~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
...+..+...|++++|...+++++...... +.......+...++.++.. .|++++|+.++++++.. .
T Consensus 376 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~--------~ 445 (514)
T 2gw1_A 376 NFFAEILTDKNDFDKALKQYDLAIELENKL--DGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL--------D 445 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTS--SSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh--------C
Confidence 344555667789999999998887653321 1111113356788999999 99999999999998874 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHH
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 321 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~ 321 (335)
|.....++.+|.++...|++++|..++++|+++ .|+++.....+.-++.
T Consensus 446 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~~ 494 (514)
T 2gw1_A 446 PRSEQAKIGLAQMKLQQEDIDEAITLFEESADL-----ARTMEEKLQAITFAEA 494 (514)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----ccccHHHHHHHHHHHH
Confidence 333466889999999999999999999999985 5677766665544444
No 167
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.38 E-value=0.0005 Score=64.31 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=67.2
Q ss_pred HHHHHhhhhcCC-hHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 191 SKKTLALTSCGN-HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 191 ~~~a~~~~~~g~-~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
...+..+...|+ +++|+..+++++.+ .|.+ ..++.+++.++..+|++++|+..+++++..- |.
T Consensus 135 ~~~g~~l~~~g~d~~eAl~~~~~al~l-----~P~~---~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld--------P~ 198 (382)
T 2h6f_A 135 HFRRVLLKSLQKDLHEEMNYITAIIEE-----QPKN---YQVWHHRRVLVEWLRDPSQELEFIADILNQD--------AK 198 (382)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC--------TT
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------cc
Confidence 344555566776 99999998888764 3444 3456778888888888888888888887632 33
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
-...++++|.++..+|++++|+..+.+|+.+
T Consensus 199 ~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 199 NYHAWQHRQWVIQEFKLWDNELQYVDQLLKE 229 (382)
T ss_dssp CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Confidence 3355677777777788888888887777764
No 168
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.38 E-value=0.002 Score=50.54 Aligned_cols=76 Identities=17% Similarity=0.166 Sum_probs=61.0
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
++.-......++..+...|+|++|+.++++++.. .+.+ ...++.+|.++..+|++++|+..|++|+.+
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 81 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML-----DHYD---ARYFLGLGACRQSLGLYEQALQSYSYGALM---- 81 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 4455666778899999999999999999988863 2233 456789999999999999999999999885
Q ss_pred cCCCChhHH
Q 019809 305 HGTNSPFMK 313 (335)
Q Consensus 305 ~G~~hp~~~ 313 (335)
.|++|...
T Consensus 82 -~p~~~~~~ 89 (142)
T 2xcb_A 82 -DINEPRFP 89 (142)
T ss_dssp -CTTCTHHH
T ss_pred -CCCCcHHH
Confidence 46666543
No 169
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.36 E-value=0.0017 Score=63.48 Aligned_cols=97 Identities=11% Similarity=-0.099 Sum_probs=78.3
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++++ .|.+ ..++..++.++...|++++|+++++++++. .|.
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~ 123 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDA-----APEH---PGIALWLGHALEDAGQAEAAAAAYTRAHQL--------LPE 123 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Confidence 344555667889999999999998875 3444 456788999999999999999999998865 233
Q ss_pred HHHHHHHHhHHHHhc---CChHHHHHHHHHHHHhhh
Q 019809 270 LGLQYYTCGKLEWFL---GDTENAIKSMTEAVEILR 302 (335)
Q Consensus 270 ~~~~l~~La~l~~~~---g~~~eA~~~l~~A~~il~ 302 (335)
....++++|.++..+ |++++|...+++|+++-.
T Consensus 124 ~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 124 EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGV 159 (568)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCC
Confidence 346788999999999 999999999999987643
No 170
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.35 E-value=0.003 Score=49.93 Aligned_cols=100 Identities=13% Similarity=0.017 Sum_probs=75.5
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.+ .|.+ ..+...++.++...|++++|+.++.+++.. .| .++.
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----~p-~~~~ 116 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIEL-----DKKY---IKGYYRRAASNMALGKFRAALRDYETVVKV----KP-HDKD 116 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----ST-TCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh----CC-CCHH
Confidence 344555667789999999999988765 3444 345678999999999999999999988864 23 3443
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
+...+.++..+...|++++|+..+.++..++..
T Consensus 117 -~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 117 -AKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 334456666688889999999999998887743
No 171
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.35 E-value=0.001 Score=50.50 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=59.4
Q ss_pred CCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 222 HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 222 ~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.+..+.....+..++..+...|+|++|+.++.+++.. .|.-...++.+|.++...|++++|+.++++|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 9 SHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3445666778888999999999999999999988863 2333567899999999999999999999999985
No 172
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.35 E-value=0.0029 Score=56.54 Aligned_cols=102 Identities=13% Similarity=-0.016 Sum_probs=71.8
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
..+..+...|++++|...++++.+. +|.+.. ......+...+...|++++|+.++++++.. +| ...
T Consensus 135 ~l~~~~~~~g~~~~A~~~l~~~~~~-----~p~~~~-~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~----~p----~~~ 200 (291)
T 3mkr_A 135 MTVQILLKLDRLDLARKELKKMQDQ-----DEDATL-TQLATAWVSLAAGGEKLQDAYYIFQEMADK----CS----PTL 200 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH-HHHHHHHHHHHHCTTHHHHHHHHHHHHHHH----SC----CCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhh-----CcCcHH-HHHHHHHHHHHhCchHHHHHHHHHHHHHHh----CC----CcH
Confidence 3444556778999999998888764 344432 122222233344568999999999988764 33 234
Q ss_pred HHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 272 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
..++++|.++..+|++++|+..|++|+.+ .|++|.+
T Consensus 201 ~~~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~~ 236 (291)
T 3mkr_A 201 LLLNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPET 236 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 57899999999999999999999999875 3566544
No 173
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.34 E-value=0.0016 Score=47.28 Aligned_cols=67 Identities=27% Similarity=0.341 Sum_probs=54.1
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH-HHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 234 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL-QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 234 ~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~-~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
..+..+...|++++|+.++++++.. . +.+ .. .++.+|.++..+|++++|+..|++|+.+ .|+++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~----~-p~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 71 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT----E-PVG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIEL-----NPDSPAL 71 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH----C-SST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH----C-CCc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCcHHH
Confidence 4667788999999999999998874 2 233 34 7899999999999999999999999975 5666644
Q ss_pred H
Q 019809 313 K 313 (335)
Q Consensus 313 ~ 313 (335)
.
T Consensus 72 ~ 72 (99)
T 2kc7_A 72 Q 72 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 174
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=97.31 E-value=0.00015 Score=58.71 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.7
Q ss_pred ccccccCCc---cCcEEEEeCCEEEEEeccccCCCCeEEEeecCCC
Q 019809 63 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETA 105 (335)
Q Consensus 63 ~s~~nHsC~---pn~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~ 105 (335)
+.++||+|. +|+...-.++.+.++|+++|++|+||++-|.+.+
T Consensus 97 mr~vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 97 MMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp GGGCCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEECHHH
T ss_pred eeeeeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEechHHH
Confidence 578999998 7999888889999999999999999999998654
No 175
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.30 E-value=0.002 Score=61.52 Aligned_cols=94 Identities=12% Similarity=0.156 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCC
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 265 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~ 265 (335)
....+...+..+...|++++|+..|++++.. .|.+ ..++..++.+|...|++++|+..+++++..
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~------- 88 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL-----DPNE---PVFYSNISACYISTGDLEKVIEFTTKALEI------- 88 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-----CCCC---cHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-------
Confidence 4556677888888999999999999998874 3444 356788999999999999999999998874
Q ss_pred CChHHHHHHHHHhHHHHhcCChHHHHHHHH
Q 019809 266 FHPLLGLQYYTCGKLEWFLGDTENAIKSMT 295 (335)
Q Consensus 266 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~ 295 (335)
+|.-...++.+|.++..+|++++|+..++
T Consensus 89 -~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 89 -KPDHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp -CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred -CCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 23344678999999999999999999884
No 176
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.28 E-value=0.0048 Score=46.03 Aligned_cols=77 Identities=9% Similarity=-0.076 Sum_probs=61.0
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChh
Q 019809 232 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 311 (335)
Q Consensus 232 ~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~ 311 (335)
...|+..+...++|..|+.+++.++.....-.. .-+.....+..||..+..+|++++|..++++|+. +.|+|+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~~~ 81 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEHQR 81 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCCHH
Confidence 346888999999999999999999876642211 1234556789999999999999999999999987 4788876
Q ss_pred HHH
Q 019809 312 MKE 314 (335)
Q Consensus 312 ~~~ 314 (335)
+..
T Consensus 82 ~~~ 84 (104)
T 2v5f_A 82 ANG 84 (104)
T ss_dssp HHH
T ss_pred HHh
Confidence 643
No 177
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.26 E-value=0.0016 Score=50.47 Aligned_cols=67 Identities=16% Similarity=0.069 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
......++..+...|+|++|+.++++++.. .+.++.....++++|.++...|++++|+..+++++.+
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 455677888999999999999999988863 3455666788999999999999999999999999986
No 178
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.25 E-value=0.0017 Score=49.97 Aligned_cols=64 Identities=20% Similarity=0.174 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
......++..+...|+|++|+.++.+++... |.....++++|.++..+|++++|+..+++|+.+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRN--------PLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC--------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4556788899999999999999999988742 333567899999999999999999999999985
No 179
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.23 E-value=0.0022 Score=58.56 Aligned_cols=101 Identities=10% Similarity=-0.012 Sum_probs=77.9
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 267 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h 267 (335)
......+..+...|++++|+..+++++.+ .|.+ ..++..++.+|..+|++++|+.++++++.+ .
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l----~---- 260 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALEL-----DSNN---EKGLSRRGEAHLAVNDFELARADFQKVLQL----Y---- 260 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH----C----
Confidence 34455666667889999999999999875 3444 456788999999999999999999998874 2
Q ss_pred hHHHHHHHHHhHHHHhcCChHHH-HHHHHHHHHhhhhh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRIT 304 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA-~~~l~~A~~il~~~ 304 (335)
|.....+..||.++..+|++++| ...+++.+..+...
T Consensus 261 P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 298 (336)
T 1p5q_A 261 PNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEE 298 (336)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 23345688999999999999998 45677776665543
No 180
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.20 E-value=0.0043 Score=53.96 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=54.1
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 275 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~----~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~ 275 (335)
.+++++|+..++++.+.. + ..+...++.+|.. .+++++|+.+++++++. .+ ...++
T Consensus 55 ~~~~~~A~~~~~~a~~~~-------~---~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~ 114 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN-------Y---SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-------KY---AEGCA 114 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT-------C---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHH
T ss_pred CCCHHHHHHHHHHHHHCC-------C---HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-------CC---ccHHH
Confidence 667777777776665431 1 3455667777777 77777777777776653 12 24567
Q ss_pred HHhHHHHh----cCChHHHHHHHHHHHHh
Q 019809 276 TCGKLEWF----LGDTENAIKSMTEAVEI 300 (335)
Q Consensus 276 ~La~l~~~----~g~~~eA~~~l~~A~~i 300 (335)
+||.++.. .+++++|+.+|++|++.
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 77777777 77778888877777763
No 181
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.19 E-value=0.003 Score=60.24 Aligned_cols=93 Identities=19% Similarity=0.124 Sum_probs=67.6
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .| .++
T Consensus 281 ~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~~-~~~--- 344 (537)
T 3fp2_A 281 FLALTLADKENSQEFFKFFQKAVDL-----NPEY---PPTYYHRGQMYFILQDYKNAKEDFQKAQSL----NP-ENV--- 344 (537)
T ss_dssp HHHHHTCCSSCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT-TCS---
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh----CC-CCH---
Confidence 3444555667788888877777653 2333 344667888888889999999988887763 22 233
Q ss_pred HHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 272 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..++.+|.++...|++++|+..+.+++.+
T Consensus 345 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 373 (537)
T 3fp2_A 345 YPYIQLACLLYKQGKFTESEAFFNETKLK 373 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 55778889999999999999999988876
No 182
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.17 E-value=0.0053 Score=43.27 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=59.1
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. . |.
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~----p~ 75 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----D----PN 75 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C----TT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----C----CC
Confidence 344555666789999999999998764 3444 345678999999999999999999998874 2 23
Q ss_pred HHHHHHHHhHHHHhcC
Q 019809 270 LGLQYYTCGKLEWFLG 285 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g 285 (335)
....+.++|.++..+|
T Consensus 76 ~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 76 NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 3455678888776543
No 183
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.16 E-value=0.0033 Score=47.11 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 227 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 227 ~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
........++..+...|++++|+.++.+++.. +|.....++.+|.++...|++++|+..+.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 34556677888999999999999999998864 2333567889999999999999999999999985
No 184
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.14 E-value=0.0011 Score=66.79 Aligned_cols=93 Identities=10% Similarity=-0.012 Sum_probs=65.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++++ .|.+ ..++..++.++...|++++|+..+++++... | .+
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~----P-~~-- 500 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAER-----VGWR---WRLVWYRAVAELLTGDYDSATKHFTEVLDTF----P-GE-- 500 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----HCCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS----T-TC--
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcc-----Ccch---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----C-CC--
Confidence 344566667788999999999888764 3444 3457788889999999999999999888642 2 22
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
...++++|.++..+|++++ +..|++|++
T Consensus 501 -~~~~~~lg~~~~~~g~~~~-~~~~~~al~ 528 (681)
T 2pzi_A 501 -LAPKLALAATAELAGNTDE-HKFYQTVWS 528 (681)
T ss_dssp -SHHHHHHHHHHHHHTCCCT-TCHHHHHHH
T ss_pred -hHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 2345566666666666666 666666655
No 185
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.12 E-value=0.004 Score=45.80 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
......++..+...|++++|+.++.+++.. .| .+ ...++.+|.++...|++++|+..+++++.+ .|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----~~-~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~ 70 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKL----DP-HN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL-----KPD 70 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT-TC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH----CC-Cc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh-----Ccc
Confidence 345667888899999999999999988864 22 23 456889999999999999999999999986 455
Q ss_pred Chh
Q 019809 309 SPF 311 (335)
Q Consensus 309 hp~ 311 (335)
++.
T Consensus 71 ~~~ 73 (118)
T 1elw_A 71 WGK 73 (118)
T ss_dssp CHH
T ss_pred cHH
Confidence 553
No 186
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.10 E-value=0.001 Score=66.88 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=71.2
Q ss_pred hhcCChHHHHHHHHHHHHHhh---cccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQK---KLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 274 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~---~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l 274 (335)
...|++++|+..+++++...- ....|.+ ..++..++.++...|++++|+..+++++... |.-...+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~---~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--------p~~~~a~ 470 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSES---VELPLMEVRALLDLGDVAKATRKLDDLAERV--------GWRWRLV 470 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTC---SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--------CCCHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccc---hhHHHHHHHHHHhcCCHHHHHHHHHHHhccC--------cchHHHH
Confidence 467899999999988862110 0123444 4456778999999999999999999988742 3334678
Q ss_pred HHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 275 YTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 275 ~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+++|.++..+|++++|+..|++|+++
T Consensus 471 ~~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 471 WYRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999985
No 187
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.09 E-value=0.0047 Score=47.28 Aligned_cols=69 Identities=12% Similarity=-0.007 Sum_probs=56.1
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChh
Q 019809 232 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 311 (335)
Q Consensus 232 ~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~ 311 (335)
...++..+...|++++|+..+++++.. .|.-...++.+|.++...|++++|+..|++|+.+ .|+++.
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~~ 86 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKDIA 86 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH
Confidence 345777889999999999999998863 2333467889999999999999999999999885 566665
Q ss_pred HH
Q 019809 312 MK 313 (335)
Q Consensus 312 ~~ 313 (335)
..
T Consensus 87 ~~ 88 (121)
T 1hxi_A 87 VH 88 (121)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 188
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=97.09 E-value=0.00042 Score=59.80 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=39.1
Q ss_pred ccccccCCc---cCcEEEEeCCEEEEEeccccCCCCeEEEeecCCCC
Q 019809 63 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAG 106 (335)
Q Consensus 63 ~s~~nHsC~---pn~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~~~ 106 (335)
+.++||+|. +|+...-.++.+.++|+++|++|+||++-|.+.++
T Consensus 141 mRfVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwYg~~Y~ 187 (237)
T 3ray_A 141 MRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYM 187 (237)
T ss_dssp GGGCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHHH
T ss_pred eeEEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEeeCHHHH
Confidence 468999997 69888878899999999999999999999987663
No 189
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.08 E-value=0.0047 Score=45.83 Aligned_cols=64 Identities=23% Similarity=0.350 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..+...++..+...|++++|+.++.+++.. .| . ....++.+|.++...|++++|+.++++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----~~-~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----DP-N---NAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CT-T---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----Cc-C---cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 345667888999999999999999988764 22 2 3456889999999999999999999999875
No 190
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.07 E-value=0.00056 Score=50.19 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=51.2
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 232 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 232 ~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
...++.++...|++++|+.++.+++.. .| . ....++.+|.++..+|++++|+..+++|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~----~~-~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQL----DP-E---ESKYWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHH----CC-C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHh----Cc-C---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 346788899999999999999998864 22 2 2456789999999999999999999999976
No 191
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.89 E-value=0.011 Score=51.18 Aligned_cols=91 Identities=19% Similarity=0.136 Sum_probs=72.5
Q ss_pred HHHHHHhhhh----cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHHHHH
Q 019809 190 LSKKTLALTS----CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQR 261 (335)
Q Consensus 190 l~~~a~~~~~----~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~----~~~~~~Al~~~~~~l~~~~~ 261 (335)
....+..+.. .+++++|+..++++.... + ..+...++.+|.. .+++++|+.+++++++.
T Consensus 77 ~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-------~---~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--- 143 (273)
T 1ouv_A 77 CHLLGNLYYSGQGVSQNTNKALQYYSKACDLK-------Y---AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL--- 143 (273)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-------C---HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-------C---ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc---
Confidence 3445555566 889999999998887641 2 4567889999999 99999999999988863
Q ss_pred hcCCCChHHHHHHHHHhHHHHh----cCChHHHHHHHHHHHHh
Q 019809 262 VYPQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 300 (335)
Q Consensus 262 ~~p~~hp~~~~~l~~La~l~~~----~g~~~eA~~~l~~A~~i 300 (335)
.+ ...+++||.++.. .+++++|+.++++|++.
T Consensus 144 ----~~---~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 144 ----ND---GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp ----TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ----Cc---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 12 3467899999998 99999999999999875
No 192
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.85 E-value=0.0048 Score=57.28 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh--------cCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRV--------YPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~--------~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
...+..++..+...|+|++|+.++++++...... .....|..+..++++|.++..+|++++|+.++.+|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 3446678889999999999999999999866542 11256778889999999999999999999999999985
No 193
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.85 E-value=0.0015 Score=49.46 Aligned_cols=62 Identities=19% Similarity=0.095 Sum_probs=47.9
Q ss_pred hchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 241 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 241 ~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
.+|++++|+.++++++.. +...|.....+++||.++..+|++++|+.++++|+.+ .|+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-----FPNHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCchHH
Confidence 358899999999988873 2346888899999999999999999999999999986 5666544
No 194
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.84 E-value=0.013 Score=52.28 Aligned_cols=89 Identities=13% Similarity=0.048 Sum_probs=57.2
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH-HH
Q 019809 194 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GL 272 (335)
Q Consensus 194 a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~-~~ 272 (335)
+..+...|++++|..++..+.. .+|.+ . .+..++.++...++|++|+.+++.... ..+|.. ..
T Consensus 109 A~~L~~~g~y~eA~~~l~~~~~-----~~p~~---~-~~~~~a~l~~~~~r~~dA~~~l~~a~~-------~~d~~~~~~ 172 (282)
T 4f3v_A 109 AACEAAQGNYADAMEALEAAPV-----AGSEH---L-VAWMKAVVYGAAERWTDVIDQVKSAGK-------WPDKFLAGA 172 (282)
T ss_dssp HHHHHHHTCHHHHHHHHTSSCC-----TTCHH---H-HHHHHHHHHHHTTCHHHHHHHHTTGGG-------CSCHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHh-----cCCch---H-HHHHHHHHHHHcCCHHHHHHHHHHhhc-------cCCcccHHH
Confidence 4445567788888777654321 22222 2 556677777888888888777763322 125554 33
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHH
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAV 298 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~ 298 (335)
..+.||.++..+|++++|+.+|++|.
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 67778888888888888888888776
No 195
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.82 E-value=0.017 Score=51.44 Aligned_cols=97 Identities=10% Similarity=-0.061 Sum_probs=72.4
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhH-HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l-~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
+..+......+++.+++..++.+. -.+ ++.. ..+...|+.++..+|++++|++++++++. ++.-|.
T Consensus 139 ~~~a~l~~~~~r~~dA~~~l~~a~------~~~-d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~ 205 (282)
T 4f3v_A 139 WMKAVVYGAAERWTDVIDQVKSAG------KWP-DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEA 205 (282)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTGG------GCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhh------ccC-CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCcc
Confidence 334445567789999988875331 112 3332 45788899999999999999999987763 222155
Q ss_pred -HHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 270 -LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 270 -~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..-..+++|.++..+|+.++|+..|++++.+
T Consensus 206 ~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 206 CARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 5557899999999999999999999999884
No 196
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.82 E-value=0.0038 Score=55.35 Aligned_cols=69 Identities=20% Similarity=0.162 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCC
Q 019809 230 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 309 (335)
Q Consensus 230 ~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~h 309 (335)
..+..++..+...|+|++|+.++.+++.. +|..+..++++|.++..+|++++|+..+++|+.+ .|++
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~ 71 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-----DGQS 71 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-----CTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC
Confidence 45667888999999999999999998874 3444577899999999999999999999999875 4555
Q ss_pred hh
Q 019809 310 PF 311 (335)
Q Consensus 310 p~ 311 (335)
+.
T Consensus 72 ~~ 73 (281)
T 2c2l_A 72 VK 73 (281)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 197
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.80 E-value=0.0074 Score=49.91 Aligned_cols=71 Identities=8% Similarity=0.002 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh---------HHHHHHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP---------LLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp---------~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
......++..+...|+|++|+.++.+++..... .+.... .....++++|.++..+|++++|+.++.+|+.
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 445667888899999999999999998875432 111000 1236789999999999999999999999998
Q ss_pred h
Q 019809 300 I 300 (335)
Q Consensus 300 i 300 (335)
+
T Consensus 117 ~ 117 (198)
T 2fbn_A 117 I 117 (198)
T ss_dssp H
T ss_pred h
Confidence 6
No 198
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.68 E-value=0.0065 Score=53.93 Aligned_cols=67 Identities=15% Similarity=0.019 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 229 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
..++.+++.++...|++++|+..+++++... |.+ .-+..+.+|+.++..+|+.++|+..|++++..+
T Consensus 219 ~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~----p~~--~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~~ 285 (287)
T 3qou_A 219 AALATQLALQLHQVGRNEEALELLFGHLRXD----LTA--ADGQTRXTFQEILAALGTGDALASXYRRQLYAL 285 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTG--GGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcc----ccc--ccchHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Confidence 4467889999999999999999999888632 222 114668899999999999999999999998754
No 199
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.64 E-value=0.035 Score=44.62 Aligned_cols=85 Identities=14% Similarity=0.071 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHhch---hHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 228 LMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 228 l~~~~~~L~~~~~~~~---~~~~Al~~~~~~l~~~~~~~p~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
...++.+++-++...+ +.++++.+++.++.. ++| ..--.+|+||..+..+|+|++|++++++++++
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i--- 100 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT--- 100 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH---
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---
Confidence 3566777888888766 788998888876652 245 44567899999999999999999999999885
Q ss_pred hcCCCChhHHHHHHHHHHHHH
Q 019809 304 THGTNSPFMKELILKLEEAQA 324 (335)
Q Consensus 304 ~~G~~hp~~~~l~~~l~~~~~ 324 (335)
-|+|+..+.++..+++...
T Consensus 101 --eP~n~QA~~Lk~~ie~~~~ 119 (152)
T 1pc2_A 101 --EPQNNQAKELERLIDKAMK 119 (152)
T ss_dssp --CTTCHHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHH
Confidence 6899999999888877654
No 200
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.56 E-value=0.01 Score=48.13 Aligned_cols=82 Identities=12% Similarity=-0.039 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcC
Q 019809 206 VVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLG 285 (335)
Q Consensus 206 a~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g 285 (335)
++..++++++ ..|.++ .++..++.++...|++++|+.++++++.. .|... -...+.+||.++..+|
T Consensus 93 a~~~~~~al~-----~~P~~~---~~~~~la~~~~~~g~~~~A~~~~~~~l~~----~p~~~--~~~a~~~l~~~~~~~g 158 (176)
T 2r5s_A 93 ELKRLEQELA-----ANPDNF---ELACELAVQYNQVGRDEEALELLWNILKV----NLGAQ--DGEVKKTFMDILSALG 158 (176)
T ss_dssp HHHHHHHHHH-----HSTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHTT----CTTTT--TTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHcccHHHHHHHHHHHHHh----CcccC--hHHHHHHHHHHHHHhC
Confidence 4444554443 244443 55778999999999999999999987753 23221 1245788999999999
Q ss_pred ChHHHHHHHHHHHHhh
Q 019809 286 DTENAIKSMTEAVEIL 301 (335)
Q Consensus 286 ~~~eA~~~l~~A~~il 301 (335)
+.++|+..|++++.-+
T Consensus 159 ~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 159 QGNAIASKYRRQLYSI 174 (176)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHH
Confidence 9999999999998754
No 201
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.46 E-value=0.013 Score=49.42 Aligned_cols=63 Identities=13% Similarity=-0.046 Sum_probs=34.8
Q ss_pred HHHHHHHHHHh----chhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh----cCChHHHHHHHHHHHH
Q 019809 231 TREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVE 299 (335)
Q Consensus 231 ~~~~L~~~~~~----~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~----~g~~~eA~~~l~~A~~ 299 (335)
+..+|+.+|.. .+++++|+.+++++++. ..+...+..+++||.++.. .+++++|+.+|++|.+
T Consensus 87 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 157 (212)
T 3rjv_A 87 GEIVLARVLVNRQAGATDVAHAITLLQDAARD------SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSS 157 (212)
T ss_dssp HHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS------TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc------CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 34445555544 44555555555544431 1112456666677777666 5666777777777765
No 202
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.36 E-value=0.01 Score=42.82 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=47.1
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 258 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~ 258 (335)
..+..+...|++++|+..+++++.. .|.+.. .++..++.++...|++++|+.++++++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~--~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT-----EPVGKD--EAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CSSTHH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH-----CCCcHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3455566788999999999998764 444432 16778999999999999999999998864
No 203
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.27 E-value=0.017 Score=55.02 Aligned_cols=89 Identities=6% Similarity=-0.028 Sum_probs=68.2
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh
Q 019809 189 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 268 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp 268 (335)
.....+..+...+++++|+..+.+++.+ .|.+ ..++..++.+|..+++|++|+.++++++.+ .|
T Consensus 319 ~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--------~P 382 (457)
T 1kt0_A 319 AFLNLAMCYLKLREYTKAVECCDKALGL-----DSAN---EKGLYRRGEAQLLMNEFESAKGDFEKVLEV--------NP 382 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------C-
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCcc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CC
Confidence 3445666667889999999999998875 3444 456788999999999999999999998864 33
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHH
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKS 293 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~ 293 (335)
.-...+..++.++..++++++|.+.
T Consensus 383 ~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 383 QNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445678899999999988887754
No 204
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.17 E-value=0.055 Score=45.39 Aligned_cols=86 Identities=12% Similarity=-0.007 Sum_probs=59.1
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 275 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~----~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~ 275 (335)
.+++++|+..++++.+. ++ ......+..+|+.+|.. .+++++|+.+++++++ . +.++. .++
T Consensus 102 ~~d~~~A~~~~~~A~~~-----~~-~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~-----~-~~~~~---a~~ 166 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARD-----SE-SDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSS-----L-SRTGY---AEY 166 (212)
T ss_dssp SCCHHHHHHHHHHHTSS-----TT-SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH-----T-SCTTH---HHH
T ss_pred ccCHHHHHHHHHHHHHc-----CC-CcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH-----c-CCCHH---HHH
Confidence 55667777666665321 11 11457888888888888 7788888888887764 1 45554 578
Q ss_pred HHhHHHHhc-C-----ChHHHHHHHHHHHHh
Q 019809 276 TCGKLEWFL-G-----DTENAIKSMTEAVEI 300 (335)
Q Consensus 276 ~La~l~~~~-g-----~~~eA~~~l~~A~~i 300 (335)
+||.++... | ++++|+.+|++|.+.
T Consensus 167 ~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 167 WAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 888887654 3 788888888888774
No 205
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.16 E-value=0.028 Score=41.05 Aligned_cols=63 Identities=16% Similarity=0.092 Sum_probs=50.3
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 260 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~ 260 (335)
.+..+..+...|++++|+..+++++++ .|.+. .++..++.+|...|++++|+..+++++.+..
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVET-----DPDYV---GTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 344555667889999999999998874 34444 3577899999999999999999999988654
No 206
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.15 E-value=0.052 Score=48.21 Aligned_cols=83 Identities=10% Similarity=0.025 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 283 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~ 283 (335)
++|...+++++.. ++|.+. .+...++..+...|++++|...+++++.. ++.++.. .+.++|.++..
T Consensus 81 ~~A~~~~~rAl~~----~~p~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~--~~~~~~~~~~~ 146 (308)
T 2ond_A 81 DEAANIYERAIST----LLKKNM---LLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPTL--VYIQYMKFARR 146 (308)
T ss_dssp HHHHHHHHHHHTT----TTTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCcccH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCccH--HHHHHHHHHHH
Confidence 7888888877641 244443 34566777888889999999988888862 3444432 56777888888
Q ss_pred cCChHHHHHHHHHHHHh
Q 019809 284 LGDTENAIKSMTEAVEI 300 (335)
Q Consensus 284 ~g~~~eA~~~l~~A~~i 300 (335)
+|++++|+..|++|+.+
T Consensus 147 ~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 147 AEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHCHHHHHHHHHHHHTS
T ss_pred hcCHHHHHHHHHHHHhc
Confidence 88888888888888764
No 207
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.94 E-value=0.11 Score=40.50 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=64.9
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 273 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~----~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~ 273 (335)
...+..++|...++++.+. .+ ..+..+|+..|.. .+++++|+.+++++.+. .+| ..
T Consensus 36 ~~g~~~~~A~~~~~~Aa~~-------g~---~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~~---~a 95 (138)
T 1klx_A 36 NSQINKQKLFQYLSKACEL-------NS---GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------NDQ---DG 95 (138)
T ss_dssp CTTSCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------TCH---HH
T ss_pred HcCCCHHHHHHHHHHHHcC-------CC---HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------CCH---HH
Confidence 3445667788888777553 12 4567889999988 78999999999998762 233 56
Q ss_pred HHHHhHHHHh----cCChHHHHHHHHHHHHh
Q 019809 274 YYTCGKLEWF----LGDTENAIKSMTEAVEI 300 (335)
Q Consensus 274 l~~La~l~~~----~g~~~eA~~~l~~A~~i 300 (335)
+++||.++.. .+++++|+.+|++|.+.
T Consensus 96 ~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 96 CLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 8999999998 89999999999999874
No 208
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.82 E-value=0.066 Score=39.03 Aligned_cols=80 Identities=9% Similarity=0.013 Sum_probs=58.6
Q ss_pred HHHHHHHHHhchh---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 232 REKLIKILMELED---WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 232 ~~~L~~~~~~~~~---~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
+..++.++...++ .++|..+.++++. .-+.++ ..++.||.++...|++++|+.+++++++. .|+
T Consensus 9 ~~~~a~al~~~~~~~~~~~A~~~l~~AL~-----~dp~~~---rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~-----~p~ 75 (93)
T 3bee_A 9 LAAKATTLYYLHKQAMTDEVSLLLEQALQ-----LEPYNE---AALSLIANDHFISFRFQEAIDTWVLLLDS-----NDP 75 (93)
T ss_dssp HHHHHHHHHHTTTTCCCHHHHHHHHHHHH-----HCTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHTC-----CCT
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHH-----HCcCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCC
Confidence 4445555554443 6899999888887 223444 56788899999999999999999998763 344
Q ss_pred ChhHHHHHHHHHHHHH
Q 019809 309 SPFMKELILKLEEAQA 324 (335)
Q Consensus 309 hp~~~~l~~~l~~~~~ 324 (335)
.|....+.+.+++++.
T Consensus 76 ~~~~~~i~~~I~~A~~ 91 (93)
T 3bee_A 76 NLDRVTIIESINKAKK 91 (93)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHh
Confidence 6667778888877664
No 209
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.76 E-value=0.21 Score=40.52 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=70.0
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCC-hhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCC--
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH-- 267 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h-~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~h-- 267 (335)
++....+...+.|+.|+-+...++.+...--.... ..-++++..+++++...++|.+|..+++++|...+.+.-...
T Consensus 24 ~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~ 103 (167)
T 3ffl_A 24 IDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVR 103 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 33444455677888888888777665432111111 233567778899999999999999999999987764321110
Q ss_pred ---------------hHHHHHHHHHhHHHHhcCChHHHHHHHH
Q 019809 268 ---------------PLLGLQYYTCGKLEWFLGDTENAIKSMT 295 (335)
Q Consensus 268 ---------------p~~~~~l~~La~l~~~~g~~~eA~~~l~ 295 (335)
+.-.-..|++|.-+..+++.++|+..++
T Consensus 104 ~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 104 PSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 1112466889999999999998877654
No 210
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.76 E-value=0.21 Score=46.49 Aligned_cols=124 Identities=7% Similarity=0.049 Sum_probs=82.2
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhc-ccCCC---Ch----------hHHHHHHHHHHHHHhchhHHHHHHHHH
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKK-LYHPF---SV----------NLMQTREKLIKILMELEDWKEALAYCQ 253 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~-~l~~~---h~----------~l~~~~~~L~~~~~~~~~~~~Al~~~~ 253 (335)
..+...+......|+.+++...+.+++.+.+. .+... .+ ....+...++..+...|++.+|+..+.
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 33444444444567788888888888877543 22211 11 112344456666778899999998877
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC-ChhHHHHHHHH
Q 019809 254 LTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN-SPFMKELILKL 319 (335)
Q Consensus 254 ~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~-hp~~~~l~~~l 319 (335)
.++. . ||..-..+..|-.++...|+..+|+..|++....+...+|-+ .|.++++.+.+
T Consensus 196 ~~~~----~----~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~i 254 (388)
T 2ff4_A 196 ALTF----E----HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERI 254 (388)
T ss_dssp HHHH----H----STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred HHHH----h----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 7653 2 333333445555677889999999999999999999999966 66777766553
No 211
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.70 E-value=0.088 Score=46.70 Aligned_cols=96 Identities=10% Similarity=-0.051 Sum_probs=56.6
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-------------H-hc
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ-------------R-VY 263 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~-------------~-~~ 263 (335)
...|++++|...|+++++ .+|.++.. +...++..+...|++++|...+.+++.... . ..
T Consensus 110 ~~~~~~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~ 182 (308)
T 2ond_A 110 ESRMKYEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCS 182 (308)
T ss_dssp HHTTCHHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTS
T ss_pred HhcCCHHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc
Confidence 455778888888877765 34444431 345566666667777777776666654210 0 00
Q ss_pred CC-------------CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 264 PQ-------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 264 p~-------------~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
|. .+|.-...+.++|.++..+|++++|+..|++|+..
T Consensus 183 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 183 KDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 00 01222344566677777778888888888887764
No 212
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=95.54 E-value=0.022 Score=51.89 Aligned_cols=94 Identities=9% Similarity=-0.107 Sum_probs=48.9
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.+|..+|++++|+.++++++.+. | .++
T Consensus 233 ~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~----p-~~~- 298 (338)
T 2if4_A 233 HLNIAACLIKLKRYDEAIGHCNIVLTE-----EEKN---PKALFRRGKAKAELGQMDSARDDFRKAQKYA----P-DDK- 298 (338)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC----C-CCH-
Confidence 345566677889999999999998874 3444 4567889999999999999999999887643 2 233
Q ss_pred HHHHHHHHhHHH-HhcCChHHHHHHHHHHHH
Q 019809 270 LGLQYYTCGKLE-WFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 270 ~~~~l~~La~l~-~~~g~~~eA~~~l~~A~~ 299 (335)
..+..|+.+. ...+..+++...|.+++.
T Consensus 299 --~a~~~L~~l~~~~~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 299 --AIRRELRALAEQEKALYQKQKEMYKGIFK 327 (338)
T ss_dssp -------------------------------
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3456666663 344566777777777765
No 213
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.03 E-value=0.14 Score=37.71 Aligned_cols=63 Identities=11% Similarity=-0.029 Sum_probs=49.9
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 260 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~ 260 (335)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++....
T Consensus 22 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 22 RFTLGKTYAEHEQFDAALPHLRAALDF-----DPTY---SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 344555567889999999999998764 3444 44567899999999999999999999988654
No 214
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.94 E-value=0.62 Score=43.40 Aligned_cols=106 Identities=18% Similarity=0.047 Sum_probs=83.1
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH-H
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-G 271 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~-~ 271 (335)
.+.-+...|+|.+|.+++.++.+-..++ + ....++.++-.-++.|..++++.++..++..+......+| .||.+ |
T Consensus 105 L~~l~~~~~~y~~a~~~i~~l~~~~~~~-d-d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p~i~a 180 (394)
T 3txn_A 105 LIALYFDTALYTEALALGAQLLRELKKL-D-DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPPKVQG 180 (394)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTS-S-CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhcc-c-cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCHHHHH
Confidence 4445678899999999998887755442 2 2467778888888999999999999999999888777665 67765 6
Q ss_pred HHHHHHhHHHH-hcCChHHHHHHHHHHHHhhh
Q 019809 272 LQYYTCGKLEW-FLGDTENAIKSMTEAVEILR 302 (335)
Q Consensus 272 ~~l~~La~l~~-~~g~~~eA~~~l~~A~~il~ 302 (335)
.....-|.++. ..++|.+|-.+|-+|..-+.
T Consensus 181 ~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 181 ALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 66667788888 89999999999999875443
No 215
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=94.78 E-value=0.45 Score=42.81 Aligned_cols=109 Identities=12% Similarity=0.072 Sum_probs=71.6
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh-----cCCCChHHHHHHHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-----YPQFHPLLGLQYYT 276 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~-----~p~~hp~~~~~l~~ 276 (335)
++.+|..+|+.+... + |. ......+.+ +++.+|+|++|....+.++..+..+ ..+.+|. .+.+
T Consensus 193 ~~q~A~~~f~El~~~----~-p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~---~LaN 260 (310)
T 3mv2_B 193 TATSNFYYYEELSQT----F-PT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPT---FLAN 260 (310)
T ss_dssp TTTHHHHHHHHHHTT----S-CS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHH---HHHH
T ss_pred cHHHHHHHHHHHHHh----C-CC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHH---HHHH
Confidence 788888888876432 2 21 111222222 7899999999999888666544221 0134554 4667
Q ss_pred HhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhccc
Q 019809 277 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 329 (335)
Q Consensus 277 La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~~ 329 (335)
+..+...+|+ +|.+++.++.. .-|+||.++++..+=..-.+-....
T Consensus 261 ~i~l~~~lgk--~a~~l~~qL~~-----~~P~hp~i~d~~~k~~~Fd~~~~ky 306 (310)
T 3mv2_B 261 QITLALMQGL--DTEDLTNQLVK-----LDHEHAFIKHHQEIDAKFDELVRKY 306 (310)
T ss_dssp HHHHHHHTTC--TTHHHHHHHHH-----TTCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCh--HHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHHHHHh
Confidence 7777777887 88888888766 3599999999988766655444433
No 216
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=94.76 E-value=0.3 Score=46.21 Aligned_cols=47 Identities=9% Similarity=0.063 Sum_probs=23.2
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh----chhHHHHHHHHHHHH
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTI 256 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~----~~~~~~Al~~~~~~l 256 (335)
.+++++|...++++.+. .+ ..+...|+..|.. .+++++|+.+++++.
T Consensus 56 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~ 106 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ-------GY---TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAA 106 (490)
T ss_dssp CCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 45566666655555432 11 2334445555554 555555555555544
No 217
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=94.70 E-value=0.86 Score=33.29 Aligned_cols=74 Identities=7% Similarity=-0.090 Sum_probs=54.3
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 191 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 191 ~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
++.+..+...++|..|+.-++.+++....--. .......++..|+.++..+|++++|+.+.++++. +.|.|+..
T Consensus 9 ~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~~~~ 82 (104)
T 2v5f_A 9 FELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCHHH
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCCHHH
Confidence 44556667889999999999998875432110 1234456778999999999999999999998876 34566654
No 218
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=94.44 E-value=0.38 Score=45.53 Aligned_cols=48 Identities=19% Similarity=0.081 Sum_probs=25.7
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh----chhHHHHHHHHHHHHH
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIP 257 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~----~~~~~~Al~~~~~~l~ 257 (335)
.+++++|...|+++.+. .+ ..+...|+..|.. .+++++|+.+++++.+
T Consensus 92 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALK-------GL---PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp CCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 45666666666665432 11 2334455555555 5566666666655543
No 219
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=93.81 E-value=1.3 Score=42.27 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=33.7
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 257 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~ 257 (335)
...|++++|..+|++++.+ .|.++. .+...++..+.+.|++++|..++.+++.
T Consensus 332 ~~~g~~~~A~~~~~~al~~-----~p~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 332 ESRMKYEKVHSIYNRLLAI-----EDIDPT--LVYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHS-----SSSCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHHHhCc-----cccCch--HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3567888888888888753 344432 2344555566667777777776666654
No 220
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=93.57 E-value=0.28 Score=38.06 Aligned_cols=77 Identities=10% Similarity=-0.002 Sum_probs=57.9
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 281 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~ 281 (335)
++++|...++++.+.- ++.- . |+..|...+.+++|+++++++.+. .+| ..+++||.++
T Consensus 10 d~~~A~~~~~~aa~~g-------~~~a---~--lg~~y~~g~~~~~A~~~~~~Aa~~-------g~~---~a~~~Lg~~y 67 (138)
T 1klx_A 10 DLKKAIQYYVKACELN-------EMFG---C--LSLVSNSQINKQKLFQYLSKACEL-------NSG---NGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHTT-------CTTH---H--HHHHTCTTSCHHHHHHHHHHHHHT-------TCH---HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC-------CHhh---h--HHHHHHcCCCHHHHHHHHHHHHcC-------CCH---HHHHHHHHHH
Confidence 5667777777775431 2221 1 777787778888999999988763 333 6789999999
Q ss_pred Hh----cCChHHHHHHHHHHHHh
Q 019809 282 WF----LGDTENAIKSMTEAVEI 300 (335)
Q Consensus 282 ~~----~g~~~eA~~~l~~A~~i 300 (335)
.. .+++++|+.+|++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 88 78999999999999763
No 221
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.85 E-value=0.42 Score=51.54 Aligned_cols=95 Identities=9% Similarity=-0.020 Sum_probs=66.1
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH--------
Q 019809 190 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR-------- 261 (335)
Q Consensus 190 l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~-------- 261 (335)
....+..+.+.|+|++|...|..+ .....++.++..+|++++|++.++++.+..-.
T Consensus 1198 ~~~iGd~le~eg~YeeA~~~Y~kA----------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acv 1261 (1630)
T 1xi4_A 1198 IQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACV 1261 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhh----------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 345667777888888888888765 23456888888899999999998887553210
Q ss_pred ---------hcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 262 ---------VYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 262 ---------~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..|-....-+..+..++..|..+|.+++|+.++++|+.+
T Consensus 1262 e~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~L 1309 (1630)
T 1xi4_A 1262 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 1309 (1630)
T ss_pred hhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence 112111112234567788888899999999999888654
No 222
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=92.71 E-value=1.3 Score=35.95 Aligned_cols=95 Identities=15% Similarity=0.079 Sum_probs=66.4
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhcC-CCChHH-HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCC-----
Q 019809 237 KILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLL-GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS----- 309 (335)
Q Consensus 237 ~~~~~~~~~~~Al~~~~~~l~~~~~~~p-~~hp~~-~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~h----- 309 (335)
+.+.+.+.|+.|+.++..++.+.+. -+ ...|.. +..++.+|.+++..++|..|..+|++|+...+...-...
T Consensus 28 k~L~d~~LY~sA~~La~lLlSl~~~-~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~ 106 (167)
T 3ffl_A 28 RDMAAAGLHSNVRLLSSLLLTLSNN-NPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST 106 (167)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhcC-CcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 3456678999999888887776543 22 235554 557888999999999999999999999998886432211
Q ss_pred ------------hhHHHHHHHHHHHHHHhcccccC
Q 019809 310 ------------PFMKELILKLEEAQAEASYKLSS 332 (335)
Q Consensus 310 ------------p~~~~l~~~l~~~~~el~~~~~~ 332 (335)
+.-.|+.=++..+..++...+.+
T Consensus 107 ~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 107 GNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 11236777788887777655443
No 223
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.59 E-value=0.25 Score=39.87 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhch-----------hHHHHHHHHHHHHHH
Q 019809 203 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----------DWKEALAYCQLTIPV 258 (335)
Q Consensus 203 ~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~-----------~~~~Al~~~~~~l~~ 258 (335)
+++|+..|++++++ .|. ...++.+++.+|..+| ++++|+.++++++++
T Consensus 62 ~~eAi~~le~AL~l-----dP~---~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 62 IQEAITKFEEALLI-----DPK---KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CcC---cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 45888888888765 333 3556788898998774 899999999998875
No 224
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=92.45 E-value=0.82 Score=43.65 Aligned_cols=87 Identities=10% Similarity=0.041 Sum_probs=60.7
Q ss_pred cCChH-------HHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 200 CGNHQ-------EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 200 ~g~~~-------ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.|+++ +|..++++++.. ..|.+. .+...++..+...|++++|...+++++.. ++.+|. .
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~----~~p~~~---~l~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~--~ 357 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAIST----LLKKNM---LLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--L 357 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTT----TCSSCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----SSSCHH--H
T ss_pred ccchhhhhhhhHHHHHHHHHHHHH----hCcccH---HHHHHHHHHHHhcCCHHHHHHHHHHHhCc-----cccCch--H
Confidence 57776 777777776431 234443 44566788888999999999999998863 444442 3
Q ss_pred HHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 273 QYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 273 ~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.+..+|.++...|++++|+..|.+|++.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 5666777777777788888888877763
No 225
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.33 E-value=0.84 Score=49.28 Aligned_cols=87 Identities=11% Similarity=0.056 Sum_probs=54.4
Q ss_pred HhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH---------------
Q 019809 195 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY--------------- 259 (335)
Q Consensus 195 ~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~--------------- 259 (335)
......|++++|+.-|.++ .+ ...+..++..+...|+|++|++++..++...
T Consensus 1113 KAql~~G~~kEAIdsYiKA----------dD---~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAK 1179 (1630)
T 1xi4_A 1113 KAQLQKGMVKEAIDSYIKA----------DD---PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAK 1179 (1630)
T ss_pred HHHHhCCCHHHHHHHHHhc----------CC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHh
Confidence 3344556677776666543 11 2234557888889999999999987654221
Q ss_pred -------HHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHH
Q 019809 260 -------QRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEA 297 (335)
Q Consensus 260 -------~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A 297 (335)
+.+....+ . ..++++|..+...|++++|..+|.+|
T Consensus 1180 l~rleele~fI~~~n--~-ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1180 TNRLAELEEFINGPN--N-AHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred hcCHHHHHHHHhCCC--H-HHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 11111111 1 23456788888888888888888876
No 226
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=92.02 E-value=0.12 Score=48.96 Aligned_cols=32 Identities=16% Similarity=-0.039 Sum_probs=24.5
Q ss_pred CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 266 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 266 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.||.- +..+..+|..+|++++|..+|++++.+
T Consensus 205 ~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 205 VHADE---LEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp TCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred hCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 45544 345778889999999999999998754
No 227
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=91.82 E-value=2.9 Score=32.17 Aligned_cols=86 Identities=14% Similarity=0.060 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcC
Q 019809 228 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 306 (335)
Q Consensus 228 l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G 306 (335)
...+..+++-++.....-.. -++.+.+++.++...+| ..--.+|.||..+..+|+|.+|+.++...+++ -
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d----~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~-----e 104 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDD----IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT-----E 104 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHH----HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----C
T ss_pred cHHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-----C
Confidence 35667777777766543322 12233344455555557 44568899999999999999999998887763 5
Q ss_pred CCChhHHHHHHHHHHH
Q 019809 307 TNSPFMKELILKLEEA 322 (335)
Q Consensus 307 ~~hp~~~~l~~~l~~~ 322 (335)
|+++....|...+++-
T Consensus 105 P~n~QA~~Lk~~i~~~ 120 (126)
T 1nzn_A 105 PQNNQAKELERLIDKA 120 (126)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 7888888888887664
No 228
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=91.69 E-value=0.91 Score=36.28 Aligned_cols=64 Identities=11% Similarity=0.022 Sum_probs=47.9
Q ss_pred HHHHHHHHhhhhcC---ChHHHHHHHHHHHHHhhcccCCCCh-hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 019809 188 NILSKKTLALTSCG---NHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPV 258 (335)
Q Consensus 188 ~~l~~~a~~~~~~g---~~~ea~~l~~~~l~l~~~~l~~~h~-~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~ 258 (335)
+..++.++.+..+. ++++++.+++.+.+.. ++ .-...++.|+..+.++++|++|.+++..++++
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 100 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 34556666676665 5668888888776532 23 34567899999999999999999999998873
No 229
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=91.38 E-value=0.82 Score=43.02 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc----hhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL----EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 277 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~----~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~L 277 (335)
++++|+..++++... ++.. .....+|+.+|... +++++|+.+++++. +.+| ..+++|
T Consensus 194 ~~~~A~~~~~~aa~~-----g~~~---a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa--------~g~~---~a~~~L 254 (452)
T 3e4b_A 194 QQAELLKQMEAGVSR-----GTVT---AQRVDSVARVLGDATLGTPDEKTAQALLEKIA--------PGYP---ASWVSL 254 (452)
T ss_dssp HHHHHHHHHHHHHHT-----TCSC---HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG--------GGST---HHHHHH
T ss_pred cHHHHHHHHHHHHHC-----CCHH---HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc--------CCCH---HHHHHH
Confidence 667777777666542 2222 22224555555433 56677777666543 1222 345556
Q ss_pred hHH-H--HhcCChHHHHHHHHHHH
Q 019809 278 GKL-E--WFLGDTENAIKSMTEAV 298 (335)
Q Consensus 278 a~l-~--~~~g~~~eA~~~l~~A~ 298 (335)
|.+ + ...+++++|+.+|++|.
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa 278 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGR 278 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHH
Confidence 655 2 34566666666666655
No 230
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=91.14 E-value=2.3 Score=36.24 Aligned_cols=62 Identities=10% Similarity=0.004 Sum_probs=49.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHH-hcCChHHHHHHHHHHHHhhhh
Q 019809 242 LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 242 ~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~-~~g~~~eA~~~l~~A~~il~~ 303 (335)
.|+-+.|...++.+.++...-+|+.||.+.-...|.+..+. .+++.++|..+.++|.++.+.
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~ 200 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILEL 200 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 35578899999999999988899999987555555555544 578999999999999998643
No 231
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.10 E-value=1.1 Score=32.38 Aligned_cols=63 Identities=11% Similarity=-0.010 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHh
Q 019809 203 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 278 (335)
Q Consensus 203 ~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La 278 (335)
..++..++++++++ .|.+ .+++..++..+...|+|++|+.+++++++. .|. .|.+...-..+.
T Consensus 25 ~~~A~~~l~~AL~~-----dp~~---~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~----~p~-~~~~~~i~~~I~ 87 (93)
T 3bee_A 25 TDEVSLLLEQALQL-----EPYN---EAALSLIANDHFISFRFQEAIDTWVLLLDS----NDP-NLDRVTIIESIN 87 (93)
T ss_dssp CHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTC----CCT-TCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----CcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----CCC-CccHHHHHHHHH
Confidence 57899999988874 4444 455677899999999999999999988763 455 665544444433
No 232
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.85 E-value=2.1 Score=40.15 Aligned_cols=101 Identities=6% Similarity=-0.117 Sum_probs=74.2
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH-
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL- 270 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~- 270 (335)
+.|.-+...|++++|.+.|.++..... .+ ...+.+...+++++...++|..+..+..++..... ...+|..
T Consensus 136 ~la~~~~~~Gd~~~A~~~~~~~~~~~~---~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~---~~~d~~~~ 207 (429)
T 4b4t_R 136 NLGEYYAQIGDKDNAEKTLGKSLSKAI---ST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE---KGGDWERR 207 (429)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHHHHHHT---CC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT---TCCCTHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcC---Ch--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh---cCCCHHHH
Confidence 455556788999999999988766432 22 34567777888999999999999999888765443 3344444
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+......|.+++..++|.+|..+|.++...
T Consensus 208 ~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 208 NRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 445555677888899999999988876543
No 233
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=90.52 E-value=1.7 Score=40.80 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=41.8
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Q 019809 200 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----DWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 274 (335)
Q Consensus 200 ~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~-----~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l 274 (335)
.+++++|+..|+++.+.. + ..+..+|+.+|. .| ++++|+.+++++. +.+| ..+
T Consensus 264 ~~d~~~A~~~~~~Aa~~g-------~---~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--------~g~~---~A~ 321 (452)
T 3e4b_A 264 LGDVEQMMKYLDNGRAAD-------Q---PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--------GREV---AAD 321 (452)
T ss_dssp GCCHHHHHHHHHHHHHTT-------C---HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT--------TTCH---HHH
T ss_pred CCCHHHHHHHHHHHHHCC-------C---HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh--------CCCH---HHH
Confidence 456666666665554321 1 234455555555 33 6666666655543 2222 455
Q ss_pred HHHhHHHHh----cCChHHHHHHHHHHHH
Q 019809 275 YTCGKLEWF----LGDTENAIKSMTEAVE 299 (335)
Q Consensus 275 ~~La~l~~~----~g~~~eA~~~l~~A~~ 299 (335)
++||.++.. ..++++|..+|++|.+
T Consensus 322 ~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 322 YYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp HHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 666666654 2366677777666654
No 234
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=89.84 E-value=2.5 Score=36.53 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh-cCChHHHHHHHHHHHHhhhh---hcCCCChhHHHHHHHHHH
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRI---THGTNSPFMKELILKLEE 321 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~~A~~il~~---~~G~~hp~~~~l~~~l~~ 321 (335)
+.|...++.+.++...-+|+.||.+.-...|.+..+.. ++..++|..+.++|.+--.. +++.++ +++....++-
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~ees--ykDstlImqL 225 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDS--YKDSTLIMQL 225 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccc--hHHHHHHHHH
Confidence 56778888899888888999999985555556666554 68888888876666543222 234442 4554444444
Q ss_pred HHH
Q 019809 322 AQA 324 (335)
Q Consensus 322 ~~~ 324 (335)
++.
T Consensus 226 LRD 228 (248)
T 3uzd_A 226 LRD 228 (248)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 235
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=89.02 E-value=3.2 Score=35.57 Aligned_cols=76 Identities=13% Similarity=0.105 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh-cCChHHHHHHHHHHHH----hhhhhcCCCChhHHHHHHHHH
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVE----ILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~~A~~----il~~~~G~~hp~~~~l~~~l~ 320 (335)
+.|...++.+.++...-+|+.||.+.....+.+..+.. +++.++|..+.++|.+ .+.. ++.+ .+++....++
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~-l~ee--sykDstlImq 223 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDT-LSEE--SYKDSTLIMQ 223 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGG-CCTT--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhc-cChh--hhHHHHHHHH
Confidence 56788889999988888999999985555555655554 7898988887666554 3332 3333 2555544444
Q ss_pred HHHH
Q 019809 321 EAQA 324 (335)
Q Consensus 321 ~~~~ 324 (335)
-++.
T Consensus 224 LLrD 227 (234)
T 2br9_A 224 LLRD 227 (234)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 236
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=88.74 E-value=1.6 Score=40.20 Aligned_cols=60 Identities=15% Similarity=0.041 Sum_probs=47.8
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 232 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 232 ~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+..++..+...|++++|+.+.++++..- | + ...+..+|+++...|+.++|+..|.+|+.+
T Consensus 280 ~~alal~~l~~gd~d~A~~~l~rAl~Ln----~--s---~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 280 YQIKAVSALVKGKTDESYQAINTGIDLE----M--S---WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC----C--C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhcC----C--C---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 3334445566799999999999998863 2 2 356678899999999999999999999874
No 237
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=88.25 E-value=2.3 Score=37.84 Aligned_cols=97 Identities=12% Similarity=0.040 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc-----hhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHh
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 278 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~-----~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La 278 (335)
.++..+.++++++ .| +..-..++..|+..|... |+.++|.+++++++.+. |...+ ...+..|
T Consensus 180 ~~A~a~lerAleL-----DP-~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~Ln----P~~~i---d~~v~YA 246 (301)
T 3u64_A 180 HAAVMMLERACDL-----WP-SYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYC----SAHDP---DHHITYA 246 (301)
T ss_dssp HHHHHHHHHHHHH-----CT-THHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHC----CTTCS---HHHHHHH
T ss_pred HHHHHHHHHHHHh-----CC-CcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhC----CCCCc---hHHHHHH
Confidence 4455556666554 22 222355777788888874 99999999999999743 32223 3456678
Q ss_pred HHHHh-cCChHHHHHHHHHHHHhhhhhcCCCChhHHH
Q 019809 279 KLEWF-LGDTENAIKSMTEAVEILRITHGTNSPFMKE 314 (335)
Q Consensus 279 ~l~~~-~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~ 314 (335)
..+.. +|++++|..++++|+.+=-.. .|+.++...
T Consensus 247 ~~l~~~~gd~~~a~~~L~kAL~a~p~~-~P~~~lan~ 282 (301)
T 3u64_A 247 DALCIPLNNRAGFDEALDRALAIDPES-VPHNKLLVI 282 (301)
T ss_dssp HHTTTTTTCHHHHHHHHHHHHHCCGGG-CSSCHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHcCCCCC-CCChhHHHH
Confidence 87777 499999999999998854333 355554443
No 238
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=87.90 E-value=3.9 Score=35.62 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh-cCChHHHHHHHHHHHH
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVE 299 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~~A~~ 299 (335)
+.|...|+.+.++...-+|+.||.+.-...+.+..|.. +++.++|..+.++|.+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 46778889999988888999999985555556665554 6888888887665543
No 239
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=87.37 E-value=14 Score=33.02 Aligned_cols=122 Identities=10% Similarity=0.004 Sum_probs=78.4
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
.+.......|+|-||.++|+.+.....+ -..+..-+.+...-+..+.+.|++..|.+++..+++++++---+.. .
T Consensus 18 ~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~--~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~---~ 92 (312)
T 2wpv_A 18 QRFENKIKAGDYYEAHQTLRTIANRYVR--SKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD---D 92 (312)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS---H
T ss_pred HHHHHHhhccChHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC---H
Confidence 3333445678999999998877553221 1123355566777777888899999999999999999987533332 2
Q ss_pred HHHHHHhHHHHhcCC-hHHHHHHHHHHHHhhhhhcCC--CChhHHHHHHH
Q 019809 272 LQYYTCGKLEWFLGD-TENAIKSMTEAVEILRITHGT--NSPFMKELILK 318 (335)
Q Consensus 272 ~~l~~La~l~~~~g~-~~eA~~~l~~A~~il~~~~G~--~hp~~~~l~~~ 318 (335)
-...+|..+...... -.+-.+++.+|+..-...-+. .||....+...
T Consensus 93 ~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~ 142 (312)
T 2wpv_A 93 ISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGS 142 (312)
T ss_dssp HHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHH
Confidence 345566666544332 224466788888887765332 47766655543
No 240
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=86.98 E-value=10 Score=30.21 Aligned_cols=85 Identities=14% Similarity=0.139 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhhcccCCCC--hhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFS--VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 281 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h--~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~ 281 (335)
++.+..|+++....-..-+-.. +..+-+++.+ +...+|.++|.+.++.++.. |...|..+..-|+..
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~---~~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFE 104 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE---LKAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFE 104 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH---HHHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHH
Confidence 5556677766553211101122 2223333333 24558889999999888875 333377777778888
Q ss_pred HhcCChHHHHHHHHHHHH
Q 019809 282 WFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 282 ~~~g~~~eA~~~l~~A~~ 299 (335)
..+|++..|++.|.+|+.
T Consensus 105 iRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 105 LSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHhc
Confidence 889999999999999998
No 241
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=86.86 E-value=5.2 Score=34.76 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh-cCChHHHHHHHHHHHH----hhhhhcCCCChhHHHHHHHHH
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVE----ILRITHGTNSPFMKELILKLE 320 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~~A~~----il~~~~G~~hp~~~~l~~~l~ 320 (335)
+.|...++.+.++...-+|+.||.+.....|.+..+.. +++.++|..+.++|.+ -+. +++.++ +++....++
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd-~L~ees--ykDstlImQ 249 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELD-TLSEES--YKDSTLIMQ 249 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGG-GCCTTT--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhh-ccChhh--hHHHHHHHH
Confidence 56778888888888888999999986555566666555 6888888887666644 333 345443 566555555
Q ss_pred HHHHH
Q 019809 321 EAQAE 325 (335)
Q Consensus 321 ~~~~e 325 (335)
-++..
T Consensus 250 LLRDN 254 (261)
T 3ubw_A 250 LLRDN 254 (261)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 242
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=86.74 E-value=7.3 Score=37.22 Aligned_cols=90 Identities=8% Similarity=-0.006 Sum_probs=65.5
Q ss_pred HhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Q 019809 195 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 274 (335)
Q Consensus 195 ~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l 274 (335)
..+...|++++|..+++...+. -+.|+ ..++..|+..|.+.|++++|.+++..+.+. +..|.. ..+
T Consensus 113 ~~~~~~g~~~~A~~l~~~M~~~---g~~Pd----~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~------G~~Pd~-~ty 178 (501)
T 4g26_A 113 RLAVAKDDPEMAFDMVKQMKAF---GIQPR----LRSYGPALFGFCRKGDADKAYEVDAHMVES------EVVPEE-PEL 178 (501)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHT---TCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------TCCCCH-HHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHc---CCCCc----cceehHHHHHHHHCCCHHHHHHHHHHHHhc------CCCCCH-HHH
Confidence 3445678999999998877542 12332 445677889999999999999988876541 233333 456
Q ss_pred HHHhHHHHhcCChHHHHHHHHHHH
Q 019809 275 YTCGKLEWFLGDTENAIKSMTEAV 298 (335)
Q Consensus 275 ~~La~l~~~~g~~~eA~~~l~~A~ 298 (335)
..|-..+...|+.++|..+|++-.
T Consensus 179 ~~Li~~~~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 179 AALLKVSMDTKNADKVYKTLQRLR 202 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHH
Confidence 677778889999999999988743
No 243
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=86.56 E-value=7.3 Score=33.32 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHH-hcCChHHHHHHHHHHHHhhhhh---cCCCChhHHHHHHHHHH
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEILRIT---HGTNSPFMKELILKLEE 321 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~-~~g~~~eA~~~l~~A~~il~~~---~G~~hp~~~~l~~~l~~ 321 (335)
+.|...++.+.++...-+|+.||.+.....|.+..+. .++..++|..+.++|.+--... ++.+ .+++....++-
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~ee--sykDstlImqL 227 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSED--SYKDSTLIMQL 227 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChh--hhHHHHHHHHH
Confidence 5677888889988888999999998555555666655 5688899888776665432222 2322 35655555554
Q ss_pred HHH
Q 019809 322 AQA 324 (335)
Q Consensus 322 ~~~ 324 (335)
++.
T Consensus 228 LRD 230 (236)
T 3iqu_A 228 LRD 230 (236)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 244
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.11 E-value=16 Score=34.16 Aligned_cols=101 Identities=10% Similarity=-0.001 Sum_probs=71.0
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCC-ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH-HHHH
Q 019809 197 LTSCGNHQEVVSTYKMIEKLQKKLYHPF-SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GLQY 274 (335)
Q Consensus 197 ~~~~g~~~ea~~l~~~~l~l~~~~l~~~-h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~-~~~l 274 (335)
+...|++.+|..++..+..- ..+.. ....+......++.|...+||.+|..+..++...... -..+|.+ +..+
T Consensus 147 ~e~~g~~~eA~~iL~~l~~E---t~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~--~~~~~~lk~~~~ 221 (445)
T 4b4t_P 147 KKEEGKIDEAADILCELQVE---TYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFK--NPKYESLKLEYY 221 (445)
T ss_dssp HHHHTCHHHHHHHHHHHHHH---HCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH--SSCCHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHH---HHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcc--cCCcHHHHHHHH
Confidence 44678999999888776532 22222 2344566677788899999999999888876432222 2445655 5566
Q ss_pred HHHhHHHHhcCChHHHHHHHHHHHHhhh
Q 019809 275 YTCGKLEWFLGDTENAIKSMTEAVEILR 302 (335)
Q Consensus 275 ~~La~l~~~~g~~~eA~~~l~~A~~il~ 302 (335)
.-+|.++...++|.+|-.+|.++.+...
T Consensus 222 ~~~~~~~~~e~~y~~a~~~y~e~~~~~~ 249 (445)
T 4b4t_P 222 NLLVKISLHKREYLEVAQYLQEIYQTDA 249 (445)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhccc
Confidence 7778999999999999999888766543
No 245
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=85.93 E-value=6.5 Score=30.18 Aligned_cols=62 Identities=13% Similarity=0.023 Sum_probs=41.4
Q ss_pred HHHHHHHhhhhcCChHH---HHHHHHHHHHHhhcccCCCCh-hHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 019809 189 ILSKKTLALTSCGNHQE---VVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIP 257 (335)
Q Consensus 189 ~l~~~a~~~~~~g~~~e---a~~l~~~~l~l~~~~l~~~h~-~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~ 257 (335)
..++.|+.+..+.+..+ .+.+++. ++...++ .--..++.|+..+.++|+|.+|..++..+|+
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~-------l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEE-------LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHH-------HTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHH-------HHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34555666655544433 3444333 3444434 4557788899999999999999999998886
No 246
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=84.63 E-value=12 Score=28.94 Aligned_cols=81 Identities=16% Similarity=0.025 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhch---hHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 229 MQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 229 ~~~~~~L~~~~~~~~---~~~~Al~~~~~~l~~~~~~~p~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..++.+.+-++.+.. +..+++.++..++. .+| ..--.+|-||..+..+|+|++|+++....++
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~--------~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~----- 106 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK--------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE----- 106 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT-----
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--------cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh-----
Confidence 456666766666543 45566666655443 235 3456788899999999999999999887765
Q ss_pred cCCCChhHHHHHHHHHHH
Q 019809 305 HGTNSPFMKELILKLEEA 322 (335)
Q Consensus 305 ~G~~hp~~~~l~~~l~~~ 322 (335)
.-|++...+.+...+++-
T Consensus 107 ~eP~N~QA~~Lk~~Ie~k 124 (134)
T 3o48_A 107 HERNNKQVGALKSMVEDK 124 (134)
T ss_dssp TCTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHH
Confidence 357788888888888665
No 247
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=84.25 E-value=5.9 Score=34.43 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh-cCChHHHHHHHHHHHHhhhh---hcCCCChhHHHHHHHHHH
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRI---THGTNSPFMKELILKLEE 321 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~~A~~il~~---~~G~~hp~~~~l~~~l~~ 321 (335)
+.|...|+.+.++. .-+|+.||.+.-...|.+..|.. +++.++|..+.++|.+--.. +++.++ +++....++-
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~ees--ykDstlImqL 249 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDC--YKDSTLIMQL 249 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhh--hHHHHHHHHH
Confidence 46777888898888 78999999985555556665554 78999998877666543322 234443 5555545554
Q ss_pred HHHH
Q 019809 322 AQAE 325 (335)
Q Consensus 322 ~~~e 325 (335)
++..
T Consensus 250 LRDN 253 (260)
T 2npm_A 250 LRDN 253 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 248
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=83.64 E-value=11 Score=36.57 Aligned_cols=87 Identities=17% Similarity=0.122 Sum_probs=53.4
Q ss_pred hhcCCh-HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchh----------HHHHHHHHHHHHHHHHHhcCCC
Q 019809 198 TSCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED----------WKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 198 ~~~g~~-~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~----------~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
...+.+ ++|+..+.+++. ..|.++..-..|..+. ...++ +++|++++.+++...
T Consensus 39 ~~~~~~~eeal~~~~~~l~-----~nP~~~taW~~R~~~l---~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~------- 103 (567)
T 1dce_A 39 RQAGELDESVLELTSQILG-----ANPDFATLWNCRREVL---QHLETEKSPEESAALVKAELGFLESCLRVN------- 103 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHH-----HCTTCHHHHHHHHHHH---HHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHcCCCCHHHHHHHHHHHH-----HCchhHHHHHHHHHHH---HhcccccchhhhhhhHHHHHHHHHHHHHhC-------
Confidence 344444 577888888875 4566665554444443 33444 888888888887532
Q ss_pred ChHHHHHHHHHhHHHHhcC--ChHHHHHHHHHHHHh
Q 019809 267 HPLLGLQYYTCGKLEWFLG--DTENAIKSMTEAVEI 300 (335)
Q Consensus 267 hp~~~~~l~~La~l~~~~g--~~~eA~~~l~~A~~i 300 (335)
|.-..+++.-+-++...+ ++++|+..+.+|+++
T Consensus 104 -pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 104 -PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp -TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 333334455555555666 457777777777764
No 249
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=82.93 E-value=13 Score=29.10 Aligned_cols=82 Identities=16% Similarity=0.020 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHhch---hHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 228 LMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 228 l~~~~~~L~~~~~~~~---~~~~Al~~~~~~l~~~~~~~p~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
..++..+.+-++.... +..+++.+++.++. .+| ..---+|-||..+..+|+|++|+++....++
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~--------~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~---- 105 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK--------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE---- 105 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH--------HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--------cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHh----
Confidence 3556667776666553 45567666665554 123 2335678899999999999999999887776
Q ss_pred hcCCCChhHHHHHHHHHHH
Q 019809 304 THGTNSPFMKELILKLEEA 322 (335)
Q Consensus 304 ~~G~~hp~~~~l~~~l~~~ 322 (335)
.-|++...+.|...+++-
T Consensus 106 -~eP~n~QA~~Lk~~Ie~~ 123 (144)
T 1y8m_A 106 -HERNNKQVGALKSMVEDK 123 (144)
T ss_dssp -TCCCCHHHHHHHHHHHHH
T ss_pred -cCCCcHHHHHHHHHHHHH
Confidence 367888888888887654
No 250
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=82.22 E-value=5.4 Score=35.67 Aligned_cols=62 Identities=11% Similarity=-0.002 Sum_probs=47.2
Q ss_pred HHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 233 EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 233 ~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
..++.++...|++++|++++.+.++. ++ .+...-.+..++.++..+|+.+.|++.+++..++
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~ 165 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA 165 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 47888999999999999998876541 11 2344455667888999999999999998776543
No 251
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=81.65 E-value=14 Score=32.73 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=52.8
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhch--hHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE--DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 279 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~--~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~ 279 (335)
..++|+.++.+++. +.|.|...-..+ ..++..++ ++++++.++..++....+.|..+|- ++..+..+.
T Consensus 48 ~s~~aL~~t~~~L~-----~nP~~~taWn~R---~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~-R~~iL~~~~- 117 (306)
T 3dra_A 48 YSERALHITELGIN-----ELASHYTIWIYR---FNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNY-RQLIIGQIM- 117 (306)
T ss_dssp CSHHHHHHHHHHHH-----HCTTCHHHHHHH---HHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHH-HHHHHHHHH-
T ss_pred CCHHHHHHHHHHHH-----HCcHHHHHHHHH---HHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHH-HHHHHHHHH-
Confidence 34689999888876 356666554444 34455667 9999999999888643322222211 122221111
Q ss_pred HHHhc---CChHHHHHHHHHHHHhh
Q 019809 280 LEWFL---GDTENAIKSMTEAVEIL 301 (335)
Q Consensus 280 l~~~~---g~~~eA~~~l~~A~~il 301 (335)
... +++++++.++.+++.+-
T Consensus 118 --~~l~~~~~~~~EL~~~~~~l~~~ 140 (306)
T 3dra_A 118 --ELNNNDFDPYREFDILEAMLSSD 140 (306)
T ss_dssp --HHTTTCCCTHHHHHHHHHHHHHC
T ss_pred --HhccccCCHHHHHHHHHHHHHhC
Confidence 233 67888888888877643
No 252
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=81.36 E-value=9.5 Score=33.22 Aligned_cols=55 Identities=20% Similarity=0.291 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCChHHHHHHHHHhHHHH-hcCChHHHHHHHHHHHHh
Q 019809 246 KEALAYCQLTIPVYQRVY--PQFHPLLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~--p~~hp~~~~~l~~La~l~~-~~g~~~eA~~~l~~A~~i 300 (335)
+.|...|+.+.++...-+ |+.||.+.-...|.+..|. .+++.++|..+.++|.+-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 567788889998888889 9999998666666666666 478999999998888776
No 253
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=80.50 E-value=8.1 Score=27.18 Aligned_cols=53 Identities=19% Similarity=0.094 Sum_probs=36.9
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh--cCCCChhHHHHHHHHHHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT--HGTNSPFMKELILKLEEA 322 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~--~G~~hp~~~~l~~~l~~~ 322 (335)
.|..+..-|.-.-..|++++|..+|.+|++.+... +.++...-..+..++.+-
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY 64 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEY 64 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34455555666677899999999999999998863 456655433455666544
No 254
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=79.72 E-value=38 Score=31.23 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCCh
Q 019809 231 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 310 (335)
Q Consensus 231 ~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp 310 (335)
+-..|+..|...|+|.+|++...+++.-..+.-. ...+.-.+..-.+++..++++.++..+|.+|..+....+ .||
T Consensus 101 l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd--~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p 176 (394)
T 3txn_A 101 LEARLIALYFDTALYTEALALGAQLLRELKKLDD--KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPP 176 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC--THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcccc--chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCH
Confidence 3347899999999999999999998887776432 233333455557788899999999999999999887654 667
Q ss_pred hHHH
Q 019809 311 FMKE 314 (335)
Q Consensus 311 ~~~~ 314 (335)
.+.-
T Consensus 177 ~i~a 180 (394)
T 3txn_A 177 KVQG 180 (394)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 255
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=78.68 E-value=24 Score=36.94 Aligned_cols=94 Identities=7% Similarity=-0.076 Sum_probs=60.7
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 271 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~ 271 (335)
...+.+...|+.++|..++....+...+-+.|+ ..+++.|+..|.+.|++++|.+++.++.+ . +..|.+
T Consensus 132 aLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~~---~---G~~PDv- 200 (1134)
T 3spa_A 132 AFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVKD---A---GLTPDL- 200 (1134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---T---TCCCCH-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHHH---c---CCCCcH-
Confidence 334456678999999999877654433333443 34677889999999999999999887643 1 233443
Q ss_pred HHHHHHhHHHHhcCCh-HHHHHHHHH
Q 019809 272 LQYYTCGKLEWFLGDT-ENAIKSMTE 296 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~-~eA~~~l~~ 296 (335)
+.|..|-..+...|+. ++|.+++++
T Consensus 201 vTYntLI~glcK~G~~~e~A~~Ll~E 226 (1134)
T 3spa_A 201 LSYAAALQCMGRQDQDAGTIERCLEQ 226 (1134)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3344443344555764 667776654
No 256
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=78.51 E-value=0.96 Score=42.78 Aligned_cols=54 Identities=9% Similarity=0.029 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 231 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 231 ~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+...++..+...|.|++|..++..+ ..+.+||..+..+|++++|++.+++|-.+
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp -------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 6778889999999999999988865 35778999999999999999999998433
No 257
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=78.40 E-value=13 Score=36.88 Aligned_cols=90 Identities=13% Similarity=0.044 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHH--HHHHhcC-CCChHHHHHHHHH---------h-HHHHhcCChHHHHHHHHH-
Q 019809 231 TREKLIKILMELEDWKEALAYCQLTIP--VYQRVYP-QFHPLLGLQYYTC---------G-KLEWFLGDTENAIKSMTE- 296 (335)
Q Consensus 231 ~~~~L~~~~~~~~~~~~Al~~~~~~l~--~~~~~~p-~~hp~~~~~l~~L---------a-~l~~~~g~~~eA~~~l~~- 296 (335)
....|++.+...++++.|.+.+.++-+ ....+|- ...+.....+-++ | .++..+|++++|+++|.+
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 456788899999999999998887522 1222221 1222221111111 2 234557888888888764
Q ss_pred -----HHHhhhhhcCCCChhHHHHHHHHHH
Q 019809 297 -----AVEILRITHGTNSPFMKELILKLEE 321 (335)
Q Consensus 297 -----A~~il~~~~G~~hp~~~~l~~~l~~ 321 (335)
|+.+- .+||+.+..+.++.+++.+
T Consensus 763 ~~~~~A~~lA-~~~~~~~~~i~~~~~~~~~ 791 (814)
T 3mkq_A 763 QRFSEAAFLG-STYGLGDNEVNDIVTKWKE 791 (814)
T ss_dssp TCHHHHHHHH-HHTTCCHHHHHHHHHHHHH
T ss_pred CChHHHHHHH-HHhCCChHHHHHHHHHHHH
Confidence 55544 4578887445666665543
No 258
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=77.69 E-value=10 Score=26.65 Aligned_cols=51 Identities=18% Similarity=0.087 Sum_probs=34.2
Q ss_pred HHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh--cCCCChhHHHHHHHHHHH
Q 019809 272 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT--HGTNSPFMKELILKLEEA 322 (335)
Q Consensus 272 ~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~--~G~~hp~~~~l~~~l~~~ 322 (335)
+.+..-|.-.-..|++++|..+|.+|++.+... +.++...-..+..++.+-
T Consensus 20 i~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY 72 (83)
T 2w2u_A 20 RKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEY 72 (83)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 344444555567899999999999999998864 455544333355665544
No 259
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=77.38 E-value=32 Score=32.67 Aligned_cols=82 Identities=15% Similarity=0.038 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHH
Q 019809 203 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 282 (335)
Q Consensus 203 ~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~ 282 (335)
.++|..+++..... -+.|+ ..+++.|+..|.+.|++++|.+++.++.. .| ..|.+ ..+..|-..+.
T Consensus 86 l~~A~~lf~~M~~~---G~~Pd----~~tyn~lI~~~~~~g~~~~A~~l~~~M~~-----~g-~~Pd~-~tyn~lI~~~~ 151 (501)
T 4g26_A 86 LSRGFDIFKQMIVD---KVVPN----EATFTNGARLAVAKDDPEMAFDMVKQMKA-----FG-IQPRL-RSYGPALFGFC 151 (501)
T ss_dssp HHHHHHHHHHHHHT---TCCCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-----TT-CCCCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---CCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHH-----cC-CCCcc-ceehHHHHHHH
Confidence 45566666554331 12332 33567788899999999999998877543 11 22332 44666667788
Q ss_pred hcCChHHHHHHHHHHH
Q 019809 283 FLGDTENAIKSMTEAV 298 (335)
Q Consensus 283 ~~g~~~eA~~~l~~A~ 298 (335)
..|+.++|.+++.+-.
T Consensus 152 ~~g~~~~A~~l~~~M~ 167 (501)
T 4g26_A 152 RKGDADKAYEVDAHMV 167 (501)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHH
Confidence 8999999999988753
No 260
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=77.26 E-value=8.3 Score=37.45 Aligned_cols=83 Identities=10% Similarity=-0.108 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 280 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~-~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l 280 (335)
++++++..+.+++++ +|.|... ...-..+....+ .++++++++.++++. +|.-..+++..+.+
T Consensus 124 ~~~~el~~~~k~l~~-----d~~N~~a---W~~R~~~l~~l~~~~~~el~~~~~~I~~--------~p~n~saW~~r~~l 187 (567)
T 1dce_A 124 NWARELELCARFLEA-----DERNFHC---WDYRRFVAAQAAVAPAEELAFTDSLITR--------NFSNYSSWHYRSCL 187 (567)
T ss_dssp CHHHHHHHHHHHHHH-----CTTCHHH---HHHHHHHHHHTCCCHHHHHHHHHTTTTT--------TCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh-----ccccccH---HHHHHHHHHHcCCChHHHHHHHHHHHHH--------CCCCccHHHHHHHH
Confidence 668888888888764 4445433 333344455666 788888888877752 34444556666666
Q ss_pred HHhc--------------CChHHHHHHHHHHHHh
Q 019809 281 EWFL--------------GDTENAIKSMTEAVEI 300 (335)
Q Consensus 281 ~~~~--------------g~~~eA~~~l~~A~~i 300 (335)
+..+ +.+++|++++.+|+.+
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~ 221 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT 221 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhh
Confidence 6553 4578888888888764
No 261
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.03 E-value=7.1 Score=37.52 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=59.8
Q ss_pred hhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHhHHHHhcCChHHHHHH
Q 019809 217 QKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF---HPLLGLQYYTCGKLEWFLGDTENAIKS 293 (335)
Q Consensus 217 ~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~---hp~~~~~l~~La~l~~~~g~~~eA~~~ 293 (335)
+...+..+...-+.+.+.|.+.|...+.+++|..+..+. .+|.. ..+.+..+|-+|.++..+++|.+|..+
T Consensus 219 rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~------~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~ 292 (523)
T 4b4t_S 219 KIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKL------EYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEY 292 (523)
T ss_dssp HHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHH------CSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcC------cCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 344555555555667778889999999999998876554 36643 346678888999999999999999999
Q ss_pred HHHHHH
Q 019809 294 MTEAVE 299 (335)
Q Consensus 294 l~~A~~ 299 (335)
|..|+.
T Consensus 293 L~~A~r 298 (523)
T 4b4t_S 293 IIAAIR 298 (523)
T ss_dssp HHHHTS
T ss_pred HHHHHH
Confidence 998875
No 262
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=75.71 E-value=19 Score=25.88 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhc
Q 019809 184 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 219 (335)
Q Consensus 184 ~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~ 219 (335)
+.....+...|......|++++|+.+|..+......
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 345556677777778889999999999998876544
No 263
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=75.40 E-value=11 Score=30.80 Aligned_cols=98 Identities=13% Similarity=0.038 Sum_probs=53.6
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH--hcC-CCChHHHHHH
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR--VYP-QFHPLLGLQY 274 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~--~~p-~~hp~~~~~l 274 (335)
.+.|+++.|.++.+.+. + -.....|+......|+++-|.+.++++-+.-.- +|- .........+
T Consensus 16 L~lg~l~~A~e~a~~l~----------~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKLN----------D---SITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHTTCHHHHHHHHHHHC----------C---HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred HhcCCHHHHHHHHHHhC----------C---HHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHH
Confidence 46789998887755431 1 223456777777788887777766665432221 111 0011110111
Q ss_pred HHH----------hHHHHhcCChHHHHHHHHHH-----HHhhhhhcCCC
Q 019809 275 YTC----------GKLEWFLGDTENAIKSMTEA-----VEILRITHGTN 308 (335)
Q Consensus 275 ~~L----------a~l~~~~g~~~eA~~~l~~A-----~~il~~~~G~~ 308 (335)
-++ ...++.+|++++++++|.++ ...+-.+||++
T Consensus 83 a~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~ 131 (177)
T 3mkq_B 83 QNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDE 131 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHHcCcH
Confidence 111 22345678999999988763 23445677864
No 264
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=73.89 E-value=53 Score=29.96 Aligned_cols=73 Identities=19% Similarity=0.136 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh-hcCCC-ChhHHHHHHHHHHH
Q 019809 247 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI-THGTN-SPFMKELILKLEEA 322 (335)
Q Consensus 247 ~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~-~~G~~-hp~~~~l~~~l~~~ 322 (335)
.++.++.+++.+.+++|+..|. .-|.-+|.-+...+++.||....-+|-++.+. .|..+ -.+++|..+-..++
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAnel 349 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIANDL 349 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTH
T ss_pred CHHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHH
Confidence 3788999999999999997775 33556777888899999999999988877664 34433 34556555444433
No 265
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=73.60 E-value=7.4 Score=37.27 Aligned_cols=62 Identities=18% Similarity=0.104 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 230 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 230 ~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
+..-.|+.+......+..|..||.+++.. .|..|..++.||.++...|+.-+|+-+|.+|+.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 34445666666666778999999988864 477888999999999999999999999888765
No 266
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=73.10 E-value=60 Score=30.18 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh-hcCCCC-hhHHHHHHHHHHHH
Q 019809 247 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI-THGTNS-PFMKELILKLEEAQ 323 (335)
Q Consensus 247 ~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~-~~G~~h-p~~~~l~~~l~~~~ 323 (335)
.+++++.+++.+.+++|...|- .-|.-+|--+...+++.+|...+-+|.+++.. .|+.+. .+++++..-..++.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hv---YPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIaneli 357 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVI 357 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHHhcccCcc---cceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHhh
Confidence 4678999999999999998774 33455677777889999999999998877764 466554 46666665555553
No 267
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=72.98 E-value=10 Score=29.72 Aligned_cols=62 Identities=13% Similarity=-0.042 Sum_probs=41.7
Q ss_pred HHHHHHHhhhhcCC---hHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 019809 189 ILSKKTLALTSCGN---HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 257 (335)
Q Consensus 189 ~l~~~a~~~~~~g~---~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~ 257 (335)
..++-|+.+..+.+ ..+++.+++.+.+. +|. ..-..++.|+..+.++|+|.+|.+++..+|+
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Ccc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34555666655443 34555666655442 222 3456678899999999999999999998876
No 268
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=72.59 E-value=11 Score=29.17 Aligned_cols=62 Identities=13% Similarity=-0.032 Sum_probs=41.7
Q ss_pred HHHHHHHhhhhcCC---hHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 019809 189 ILSKKTLALTSCGN---HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 257 (335)
Q Consensus 189 ~l~~~a~~~~~~g~---~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~ 257 (335)
+.++-|+.+..+.+ ..+++.+++.+.+. +| ...-..++.|+..+.++|+|++|.+++..+|+
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-----~~--~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AE--SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-----CG--GGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Cc--chhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 34556666655543 34556666555432 11 23456778899999999999999999988775
No 269
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=70.78 E-value=55 Score=32.48 Aligned_cols=94 Identities=12% Similarity=-0.042 Sum_probs=59.9
Q ss_pred hcCChHHHH-HHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh-------cCCC----
Q 019809 199 SCGNHQEVV-STYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-------YPQF---- 266 (335)
Q Consensus 199 ~~g~~~ea~-~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~-------~p~~---- 266 (335)
..|+.++|. ++++++... + |.+. ......+......|++++|.+.+.+++.....- .|..
T Consensus 355 ~~~~~~~a~r~il~rAi~~----~-P~s~---~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~ 426 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQC----I-PNSA---VLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAI 426 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHH----C-TTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hcCcHHHHHHHHHHHHHHh----C-CCCH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhh
Confidence 445666775 888777542 2 3332 223445666677889999999999988754211 1321
Q ss_pred ---ChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 267 ---HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 267 ---hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
+......+...+.+....|..+.|+..|.+|+..
T Consensus 427 ~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 427 NQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1123445566667777778889999999998765
No 270
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=70.48 E-value=2.6 Score=26.53 Aligned_cols=31 Identities=26% Similarity=0.639 Sum_probs=22.6
Q ss_pred cCccCCCCCCc-ceecCCCCCccccCcCCCCCcH
Q 019809 145 GYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRSK 177 (335)
Q Consensus 145 ~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~~ 177 (335)
.+.|+ .|++ .+..+.....+.|..||.....
T Consensus 5 ~~~CP--~C~~~~l~~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 5 QKVCP--ACESAELIYDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp CCSCT--TTSCCCEEEETTTTEEEESSSCCBCCC
T ss_pred cEeCc--CCCCcceEEcCCCCeEECcccCCcccc
Confidence 35686 5777 6766666677999999986653
No 271
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=70.14 E-value=41 Score=30.70 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=55.3
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC-CCChHH
Q 019809 192 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLL 270 (335)
Q Consensus 192 ~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p-~~hp~~ 270 (335)
..+......|++.+++..+..+.. .+|.+-. ++..|+.++...|+..+|++.|+.....+..-+| ...|.+
T Consensus 176 ~~~~~~l~~g~~~~a~~~l~~~~~-----~~P~~E~---~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l 247 (388)
T 2ff4_A 176 AKAEAEIACGRASAVIAELEALTF-----EHPYREP---LWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTL 247 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH-----HSTTCHH---HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 344555677899999887776654 4565544 4567889999999999999999999988877777 666766
Q ss_pred HH
Q 019809 271 GL 272 (335)
Q Consensus 271 ~~ 272 (335)
--
T Consensus 248 ~~ 249 (388)
T 2ff4_A 248 RA 249 (388)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 272
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=70.09 E-value=54 Score=30.51 Aligned_cols=73 Identities=11% Similarity=0.150 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh-hcCCC-ChhHHHHHHHHHHH
Q 019809 247 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI-THGTN-SPFMKELILKLEEA 322 (335)
Q Consensus 247 ~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~-~~G~~-hp~~~~l~~~l~~~ 322 (335)
.++.++.+++...+++|...|. .-|.-+|.-+...+++.||...+-+|-++++. .|..+ -.+++|..+...++
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAnel 371 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDV 371 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTH
T ss_pred CHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHh
Confidence 4778999999999999997775 33556777888899999999999988877764 34433 44677766555444
No 273
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=69.24 E-value=31 Score=30.50 Aligned_cols=91 Identities=9% Similarity=-0.043 Sum_probs=59.1
Q ss_pred hhhcC--ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHH-Hhc---hhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 197 LTSCG--NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKIL-MEL---EDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 197 ~~~~g--~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~-~~~---~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
+...+ ++++++..+..++. ..|.++.+-.-|..+..-. ... +++++++.++.++++.. | .-
T Consensus 77 L~~l~~~~~~eeL~~~~~~L~-----~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~----p----kn 143 (306)
T 3dra_A 77 LKNLPNRNLYDELDWCEEIAL-----DNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSD----P----KN 143 (306)
T ss_dssp HHTCTTSCHHHHHHHHHHHHH-----HCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHC----T----TC
T ss_pred HHHcccccHHHHHHHHHHHHH-----HCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhC----C----CC
Confidence 33445 88888888888765 4677776666565555322 334 78999999999888632 3 22
Q ss_pred HHHHHHHhHHHHhcCChH--HHHHHHHHHHHh
Q 019809 271 GLQYYTCGKLEWFLGDTE--NAIKSMTEAVEI 300 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~--eA~~~l~~A~~i 300 (335)
-.+++.-+-+....|.++ +++.++.+++++
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 233444455555566666 888888877653
No 274
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=67.89 E-value=1.1 Score=31.75 Aligned_cols=29 Identities=14% Similarity=0.337 Sum_probs=21.3
Q ss_pred cCccCCCCCCcceecCCCCCccccCcCCCCC
Q 019809 145 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 175 (335)
Q Consensus 145 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 175 (335)
.+.|+ +|++..+.......|.|..||...
T Consensus 27 ~y~Cp--~CG~~~v~r~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 27 DHACP--NCGEDRVDRQGTGIWQCSYCDYKF 55 (83)
T ss_dssp CEECS--SSCCEEEEEEETTEEEETTTCCEE
T ss_pred cCcCC--CCCCcceeccCCCeEECCCCCCEe
Confidence 56775 577766666666789999999853
No 275
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=66.79 E-value=71 Score=28.53 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=38.3
Q ss_pred HHHHHHhhhhcCChH-HHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhc-------hhHHHHHHHHHHHHH
Q 019809 190 LSKKTLALTSCGNHQ-EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-------EDWKEALAYCQLTIP 257 (335)
Q Consensus 190 l~~~a~~~~~~g~~~-ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~-------~~~~~Al~~~~~~l~ 257 (335)
+.+........|.+. +|+..+..++. +.|.|+..-..+..+....... ..+++++.++..++.
T Consensus 32 ~~~~~~~~~~~~e~s~eaL~~t~~~L~-----~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~ 102 (331)
T 3dss_A 32 ATQAVFQKRQAGELDESVLELTSQILG-----ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR 102 (331)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHT-----TCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHH-----HCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH
Confidence 334444444556664 77888777754 5777777766666655544331 226777777777765
No 276
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=66.67 E-value=19 Score=25.43 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=31.5
Q ss_pred HHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhc-CCCChhHHH
Q 019809 271 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH-GTNSPFMKE 314 (335)
Q Consensus 271 ~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~-G~~hp~~~~ 314 (335)
|..+..-|.-.-..|++++|..+|.+|++.+.... +...|..++
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~ 60 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRC 60 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHH
Confidence 44455555556778999999999999999987664 344555554
No 277
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=66.48 E-value=2.6 Score=27.64 Aligned_cols=35 Identities=26% Similarity=0.540 Sum_probs=24.5
Q ss_pred hhhhhcCccCCCCCCc-ceecCCCCCccccCcCCCCCc
Q 019809 140 SAILEGYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRS 176 (335)
Q Consensus 140 ~~~~~~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~ 176 (335)
+.++....|+. |++ .+..+.....+.|..||....
T Consensus 6 ~~ll~~~~Cp~--C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 6 LDALPRVTCPN--HPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp CCCCSCCSBTT--BSSSCCEECSSSCCEECTTTCCEEC
T ss_pred hhccccccCcC--CCCCceeEeCCCCeEEeCCCCCEEe
Confidence 34566678964 754 465566667899999998664
No 278
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=65.87 E-value=64 Score=29.10 Aligned_cols=83 Identities=12% Similarity=0.030 Sum_probs=53.0
Q ss_pred CChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhH
Q 019809 201 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 279 (335)
Q Consensus 201 g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~-~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~ 279 (335)
+..++|+.++.+++. +.|.|+..-..|.. ++...+ ++++++.++..++... |.-..+++.-+.
T Consensus 68 e~se~AL~lt~~~L~-----~nP~~ytaWn~R~~---iL~~l~~~l~eEL~~~~~~L~~n--------PKny~aW~hR~w 131 (349)
T 3q7a_A 68 EKSERALELTEIIVR-----MNPAHYTVWQYRFS---LLTSLNKSLEDELRLMNEFAVQN--------LKSYQVWHHRLL 131 (349)
T ss_dssp CCSHHHHHHHHHHHH-----HCTTCHHHHHHHHH---HHHHTTCCHHHHHHHHHHHHHTT--------CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH-----hCchhHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHhC--------CCcHHHHHHHHH
Confidence 345688888888876 45666665554443 344556 5999999998887422 222333444455
Q ss_pred HHHhc-C-ChHHHHHHHHHHHH
Q 019809 280 LEWFL-G-DTENAIKSMTEAVE 299 (335)
Q Consensus 280 l~~~~-g-~~~eA~~~l~~A~~ 299 (335)
++..+ + ++++++.++.++++
T Consensus 132 lL~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 132 LLDRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp HHHHHCCSCCHHHHHHHHHHTS
T ss_pred HHHHhcCCChHHHHHHHHHHHH
Confidence 55554 5 77888888877765
No 279
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=64.69 E-value=39 Score=30.92 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=27.6
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
|.-+..+.-+|..++..|++++|+..+++|+.+
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L 306 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDL 306 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 444566777787888889999999999999997
No 280
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=64.16 E-value=34 Score=25.68 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=31.2
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhc--CCCChhHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH--GTNSPFMK 313 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~--G~~hp~~~ 313 (335)
.|..+.+.|.-.-..|++++|+.+|.+|++.+.... -+..+..+
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k 62 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAK 62 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 345555556556677999999999999999888664 32455433
No 281
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=62.60 E-value=36 Score=24.27 Aligned_cols=36 Identities=8% Similarity=-0.044 Sum_probs=29.4
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhc
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 305 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~ 305 (335)
.|..+.+.|.-.-..|++++|..+|.+|++.+....
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 456666777777788999999999999999988753
No 282
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=60.39 E-value=45 Score=34.98 Aligned_cols=68 Identities=10% Similarity=-0.152 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHH
Q 019809 226 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEA 297 (335)
Q Consensus 226 ~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A 297 (335)
.....+++.|+..|.+.|++++|.++.........+- ..|.+ ..|+.|-.-+...|+.++|.++|.+-
T Consensus 124 ~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG---~~Pdv-vTYNtLI~Glck~G~~~eA~~Lf~eM 191 (1134)
T 3spa_A 124 SGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKR---KLLTL-DMYNAVMLGWARQGAFKELVYVLFMV 191 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHH---TTCCH-HHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcC---CCCCH-hHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3445677889999999999999999887665443332 23433 56777777888899999999998874
No 283
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=60.37 E-value=34 Score=23.86 Aligned_cols=36 Identities=11% Similarity=0.011 Sum_probs=28.4
Q ss_pred HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 269 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 269 ~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
..|..+...|.-.-..|++++|..+|.+|++.+...
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 345666666666677899999999999999987764
No 284
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=59.26 E-value=28 Score=29.67 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIP 257 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~-~~~~~~Al~~~~~~l~ 257 (335)
+.+...|+.+..+...-++|+||..+.+..+.+.-|.. +++-++|..+.+++.+
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45667788888877667999999888877777665554 6899999999888776
No 285
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=58.09 E-value=24 Score=25.37 Aligned_cols=43 Identities=23% Similarity=0.107 Sum_probs=33.5
Q ss_pred CChH-HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCC
Q 019809 266 FHPL-LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 308 (335)
Q Consensus 266 ~hp~-~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~ 308 (335)
++|. .|..+-+.|..+...|+|++|++..++|...+...+--.
T Consensus 9 ~spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmklt 52 (97)
T 2crb_A 9 EGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLT 52 (97)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cchhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 4454 366777889999999999999999999987777665533
No 286
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=57.36 E-value=4 Score=26.83 Aligned_cols=31 Identities=19% Similarity=0.298 Sum_probs=21.6
Q ss_pred cCccCCCCCCcceecC----CCCCccccCcCCCCC
Q 019809 145 GYRCKDDGCSGFLLRD----SDDKGFTCQQCGLVR 175 (335)
Q Consensus 145 ~~~C~~~~C~g~~~~~----~~~~~~~C~~C~~~~ 175 (335)
-.+|..+.|.+++.|- ...+.|+|.-|+...
T Consensus 9 pvRC~r~~CraylNP~~~~~~~~~~W~C~~C~~~N 43 (59)
T 2yrc_A 9 PVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRN 43 (59)
T ss_dssp CCBCSCTTTCCBCCTTSEEEGGGTEEECSSSCCEE
T ss_pred CcccCCCCCCeEECCceEEECCCCEEEcccCCCcC
Confidence 4678765688777553 235689999998743
No 287
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=56.79 E-value=46 Score=28.11 Aligned_cols=70 Identities=14% Similarity=0.101 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHH-hHHHHh-----cCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHH
Q 019809 249 LAYCQLTIPVYQRVYPQFHPLLGLQYYTC-GKLEWF-----LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 319 (335)
Q Consensus 249 l~~~~~~l~~~~~~~p~~hp~~~~~l~~L-a~l~~~-----~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l 319 (335)
..+|..++.+....+-+.. .--+.+++| |..+.. .|..+.|...|++|.++....+.|.||+-..+.-+.
T Consensus 98 ~~iC~dil~lld~~Lip~a-EskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNf 173 (227)
T 2o8p_A 98 KAFLQSFEDCVDRLVEKSF-FSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNL 173 (227)
T ss_dssp HHHHHHHHHHHHTCCCCSH-HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHH
T ss_pred HHHHhhHHHHHHHhccCcH-HHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHH
Confidence 4478888888877665443 333333333 555443 366889999999999999999999999877665554
No 288
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=56.14 E-value=21 Score=31.62 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhc-----CChHHHHHHHHHHHHhhh
Q 019809 245 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-----GDTENAIKSMTEAVEILR 302 (335)
Q Consensus 245 ~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~-----g~~~eA~~~l~~A~~il~ 302 (335)
.++|....++++++-.. -.-|..+.-||.+|... |+.++|+.+|++|++|--
T Consensus 179 l~~A~a~lerAleLDP~------~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP 235 (301)
T 3u64_A 179 VHAAVMMLERACDLWPS------YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCS 235 (301)
T ss_dssp HHHHHHHHHHHHHHCTT------HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCC------cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCC
Confidence 35566666666554322 22456777788888775 999999999999998643
No 289
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=55.51 E-value=36 Score=28.98 Aligned_cols=54 Identities=15% Similarity=0.090 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHH-hchhHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM-ELEDWKEALAYCQLTIP 257 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~-~~~~~~~Al~~~~~~l~ 257 (335)
+.+...|+.+..+...-++|+||..+....+.+.-|. -+++-++|..+.+++.+
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556778888877767799999988887777766555 45888999998888765
No 290
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=55.40 E-value=35 Score=29.29 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 258 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~-~~~~~~Al~~~~~~l~~ 258 (335)
+.+...|+.+..+...-++|+||..+.+..+.+.-|.. +++-++|..+.+.+.+-
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~ 203 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDD 203 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45667788888777677999999888877777665554 68899999998887763
No 291
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=54.46 E-value=37 Score=29.37 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 258 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~-~~~~~~Al~~~~~~l~~ 258 (335)
+.+...|+.+..+...-++|+||..+.+..+.+.-|.+ +++-++|..+.+++.+-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45566788887776677999999888877777766555 68899999998887763
No 292
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=53.37 E-value=75 Score=24.44 Aligned_cols=38 Identities=5% Similarity=-0.111 Sum_probs=29.8
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHH
Q 019809 175 RSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKM 212 (335)
Q Consensus 175 ~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~ 212 (335)
.+.+++..+......-++.|......|.++.+.-...+
T Consensus 4 ~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~a~F~aqQ 41 (141)
T 3o10_A 4 GNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYL 41 (141)
T ss_dssp CCHHHHHHHHHHHHHHHHHHGGGTTTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhhhHHhhHHhhCccceEeeehhH
Confidence 45678889999998888888888888998877644444
No 293
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=53.03 E-value=43 Score=28.97 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIP 257 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~-~~~~~~Al~~~~~~l~ 257 (335)
+.+...|+.+..+. .-++|+||..+.+..+.+.-|.+ +++-++|..+.+++.+
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45667788888887 77999999888877777765554 6889999999888776
No 294
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=52.51 E-value=41 Score=29.11 Aligned_cols=54 Identities=11% Similarity=0.120 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIP 257 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~-~~~~~~Al~~~~~~l~ 257 (335)
+.+...|+.+..+...-++|+||..+.+..+.+.-|.. +++-++|..+.+++.+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 35667788888877667999999888877777665554 6888999888887765
No 295
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=52.51 E-value=1.2e+02 Score=29.92 Aligned_cols=96 Identities=10% Similarity=0.043 Sum_probs=52.7
Q ss_pred hhcCChHHHHHHHHHHHHHhhccc------CCCCh--------hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhc
Q 019809 198 TSCGNHQEVVSTYKMIEKLQKKLY------HPFSV--------NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY 263 (335)
Q Consensus 198 ~~~g~~~ea~~l~~~~l~l~~~~l------~~~h~--------~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~ 263 (335)
...|++++|.++|++++.....-+ .|.+. ....+.-..+....+.|+.+.|..++.+++.. .
T Consensus 389 e~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~----~ 464 (679)
T 4e6h_A 389 ELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL----K 464 (679)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT----G
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----c
Confidence 355789999999998876421100 02210 11223333444455667788888877777653 1
Q ss_pred CCCChHHHHHHHHHhHHHHhcCC-hHHHHHHHHHHHHh
Q 019809 264 PQFHPLLGLQYYTCGKLEWFLGD-TENAIKSMTEAVEI 300 (335)
Q Consensus 264 p~~hp~~~~~l~~La~l~~~~g~-~~eA~~~l~~A~~i 300 (335)
|...+. .+...|.+....++ .+.|++.|+++++.
T Consensus 465 ~~~~~~---lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~ 499 (679)
T 4e6h_A 465 KLVTPD---IYLENAYIEYHISKDTKTACKVLELGLKY 499 (679)
T ss_dssp GGSCTH---HHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred CCCChH---HHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 222222 23344555555443 67777777777764
No 296
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=49.51 E-value=27 Score=27.38 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=31.1
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 312 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~ 312 (335)
+|..+++.|.++..-|+.+.|--+|-++..++..... .||.+
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip-kHpdy 80 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP-KHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG-GSTTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc-cCccc
Confidence 4556677788888889999999999998888764433 35544
No 297
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=49.03 E-value=31 Score=23.96 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=33.0
Q ss_pred HHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCC-CChhHHHHHHHHHHHHHHhc
Q 019809 274 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT-NSPFMKELILKLEEAQAEAS 327 (335)
Q Consensus 274 l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~-~hp~~~~l~~~l~~~~~el~ 327 (335)
..++|.=+...|+|+.|+.+|+-+++-+....-. +.|. ...++.+++.++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~---~r~kW~~~~~ei~ 66 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTH---LRQKWQQVWQEIN 66 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHH---HHHhHHHHHHHHH
Confidence 3456666777899999999999998777654332 2332 3445555544443
No 298
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=47.67 E-value=69 Score=28.61 Aligned_cols=82 Identities=11% Similarity=-0.104 Sum_probs=47.8
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchh-HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 280 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~-~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l 280 (335)
.+++++..+.+++.. +|.|...-.-+ ..+....|. ++++++++.+.++. .| .-..+++..+.+
T Consensus 125 ~~~~EL~~~~k~l~~-----dprNy~AW~~R---~~vl~~l~~~~~eel~~~~~~I~~----~p----~N~SAW~~R~~l 188 (331)
T 3dss_A 125 NWARELELCARFLEA-----DERNFHCWDYR---RFVAAQAAVAPAEELAFTDSLITR----NF----SNYSSWHYRSCL 188 (331)
T ss_dssp CHHHHHHHHHHHHHH-----CTTCHHHHHHH---HHHHHHTTCCHHHHHHHHHHHHHH----CS----CCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh-----CCCCHHHHHHH---HHHHHHhCcCHHHHHHHHHHHHHH----CC----CCHHHHHHHHHH
Confidence 467777777777653 45555433222 233344566 68888888887752 23 323344445555
Q ss_pred HHhc--------------CChHHHHHHHHHHHH
Q 019809 281 EWFL--------------GDTENAIKSMTEAVE 299 (335)
Q Consensus 281 ~~~~--------------g~~~eA~~~l~~A~~ 299 (335)
...+ +.++++++++.+|+.
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 4444 457788888887764
No 299
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.25 E-value=86 Score=23.38 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhccc
Q 019809 184 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 221 (335)
Q Consensus 184 ~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l 221 (335)
+..+..+...|...-..++|++|+.+|..+.......+
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 34445566667777778999999999999888655443
No 300
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=46.79 E-value=36 Score=24.55 Aligned_cols=50 Identities=24% Similarity=0.339 Sum_probs=32.2
Q ss_pred HHHhHHHHhcCChHHHHHHHHHH----------HHhhhhhcCCCChhHHHHHHHHHHHHHHh
Q 019809 275 YTCGKLEWFLGDTENAIKSMTEA----------VEILRITHGTNSPFMKELILKLEEAQAEA 326 (335)
Q Consensus 275 ~~La~l~~~~g~~~eA~~~l~~A----------~~il~~~~G~~hp~~~~l~~~l~~~~~el 326 (335)
..+|..+...|.+++|+.+|-+| +.|++.+.-+ +.+.-+..+|..+...+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP~--~Vf~~Li~~l~~~~~r~ 83 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPP--PVFQMLLTKLPTISQRI 83 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCC--HHHHHHHHHSCSHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCH--HHHHHHHHHHHHHHhhc
Confidence 35677777788888888877776 4556666554 34555666665554443
No 301
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=46.76 E-value=1.6e+02 Score=26.36 Aligned_cols=117 Identities=7% Similarity=0.020 Sum_probs=76.2
Q ss_pred hhhhcCCh---HHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 019809 196 ALTSCGNH---QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 272 (335)
Q Consensus 196 ~~~~~g~~---~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~ 272 (335)
.....|+| -||-++|+-+.....+ .......+.+...-+..+.+.+++.-|.+++..++++|++---+... .
T Consensus 21 ~~I~~G~y~~~YEAHQ~~RTi~~Ry~~--~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~---~ 95 (336)
T 3lpz_A 21 RRIAEGQPEEQYEAAQETRLVAARYSK--QGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDG---A 95 (336)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCH---H
T ss_pred HHHhCCCCccccHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH---H
Confidence 34467899 8898888776543211 12234455667777778888999999999999999999876433322 3
Q ss_pred HHHHHhHHHHhcCC-hHHHHHHHHHHHHhhhhhcC---CCChhHHHHHHH
Q 019809 273 QYYTCGKLEWFLGD-TENAIKSMTEAVEILRITHG---TNSPFMKELILK 318 (335)
Q Consensus 273 ~l~~La~l~~~~g~-~~eA~~~l~~A~~il~~~~G---~~hp~~~~l~~~ 318 (335)
...+|..+...... -.+-.+++.+|+..-.. +| ..||....+...
T Consensus 96 ~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~-~g~~~~Gdp~LH~~ig~ 144 (336)
T 3lpz_A 96 SRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKK-FGDYPAGDPELHHVVGT 144 (336)
T ss_dssp HHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHH-HSSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhh-cCCCCCCCHHHHHHHHH
Confidence 44566666554443 23456678888887776 44 347766655443
No 302
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.28 E-value=1.7e+02 Score=26.56 Aligned_cols=94 Identities=9% Similarity=0.018 Sum_probs=57.9
Q ss_pred hcCChHHHHHHHHHHHHHhhcc---------cCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChH
Q 019809 199 SCGNHQEVVSTYKMIEKLQKKL---------YHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 269 (335)
Q Consensus 199 ~~g~~~ea~~l~~~~l~l~~~~---------l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~ 269 (335)
...+.+++.+.++.+....... .....-..+.+...+++.|...++.++|..+..++-...... +..+|.
T Consensus 88 ~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~-~~~~~~ 166 (393)
T 4b4t_O 88 DSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKK-DSIPLR 166 (393)
T ss_dssp HTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHS-CCSSSH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhcc-CCccHH
Confidence 3456778877766553321111 111123445666778889999999999999888877766654 445554
Q ss_pred -HHHHHHHHhHHHHhcCChHHHHHH
Q 019809 270 -LGLQYYTCGKLEWFLGDTENAIKS 293 (335)
Q Consensus 270 -~~~~l~~La~l~~~~g~~~eA~~~ 293 (335)
.+..+.-.+..+...+++.++-..
T Consensus 167 v~~~~y~~~~~~~~~~~~~a~~y~~ 191 (393)
T 4b4t_O 167 ITNSFYSTNSQYFKFKNDFNSFYYT 191 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 455555556666666766655443
No 303
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.83 E-value=92 Score=23.29 Aligned_cols=44 Identities=14% Similarity=0.202 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 244 DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 244 ~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
.+++|..+..+.|.+-+. .++..|+.+|+ +++..|.+++.|-..
T Consensus 18 ~h~~AF~~Is~AL~~DE~----g~k~~Al~lYk------------~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL----GQKEEAKNYYK------------QGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH----TCHHHHHHHHH------------HHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc----CCHHHHHHHHH------------HHHHHHHHhcccccc
Confidence 456677777777766663 56666655554 334456666666554
No 304
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=44.06 E-value=35 Score=27.65 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=38.8
Q ss_pred HHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 238 ILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 238 ~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
.....|+++.|.++++.+ +. -..+.+||......|+++-|+..|+++-+
T Consensus 14 LAL~lg~l~~A~e~a~~l----------~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL----------ND---SITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH----------CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHhcCCHHHHHHHHHHh----------CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 456779999999987653 22 24688999999999999999999988643
No 305
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=43.94 E-value=82 Score=31.70 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=38.5
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHH
Q 019809 193 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAY 251 (335)
Q Consensus 193 ~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~ 251 (335)
.+.-+.++|+++-|+.+-+++... .|.. ..+-..|+.+|..+|+|+.|+--
T Consensus 343 Qa~FLl~K~~~elAL~~Ak~AV~~-----aPse---F~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 343 QTNFLLNRGDYELALGVSNTSTEL-----ALDS---FESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CSSC---HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHhc-----Cchh---hHHHHHHHHHHHHhccHHHHHHH
Confidence 455556788999999888777553 3333 44577899999999999999864
No 306
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=43.87 E-value=39 Score=23.55 Aligned_cols=37 Identities=8% Similarity=0.147 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhc
Q 019809 183 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 219 (335)
Q Consensus 183 ~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~ 219 (335)
+......+...|......|++++|+.+|..++.....
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3455566777788888899999999999988775433
No 307
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=43.06 E-value=2.1e+02 Score=26.71 Aligned_cols=73 Identities=16% Similarity=0.057 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC--CCCh--HHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 227 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP--QFHP--LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 227 ~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p--~~hp--~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
.++-....|..+|.+.+...-|..+.+.+ +.. ...| ..+| .....+|-+|+++...+++.+|...|.+|+..+
T Consensus 174 ~~l~l~n~L~kiYFkl~~~~lckni~k~i-~~~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~l 250 (455)
T 3t5v_B 174 ILLYLVNKLNNIYFRIESPQLCSNIFKNF-QPK-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSL 250 (455)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTHHHHHHTH-HHH-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHh-ccC-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 44556677889999998877665554332 221 1111 1122 456678889999999999999999999999973
No 308
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=43.02 E-value=1.7e+02 Score=25.44 Aligned_cols=51 Identities=20% Similarity=0.109 Sum_probs=34.8
Q ss_pred hhhhcCChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHH
Q 019809 196 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQL 254 (335)
Q Consensus 196 ~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~ 254 (335)
.+...|+.+++++....-.+ -.|.+ ...|..|++.+.-.|+|++|..-++.
T Consensus 6 ~ll~~g~L~~al~~~~~~VR-----~~P~d---a~~R~~LfqLLcv~G~w~RA~~QL~~ 56 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIK-----ASPKD---ASLRSSFIELLCIDGDFERADEQLMQ 56 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHH-----TCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHH-----hCCcC---HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34566788888766554433 23444 45577889999999999999886543
No 309
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=42.20 E-value=1.4e+02 Score=24.35 Aligned_cols=76 Identities=14% Similarity=0.059 Sum_probs=49.0
Q ss_pred cCCCChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH--H----------HHhcCCCChHHHHHHHHHhHHHHhcCChH
Q 019809 221 YHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV--Y----------QRVYPQFHPLLGLQYYTCGKLEWFLGDTE 288 (335)
Q Consensus 221 l~~~h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~--~----------~~~~p~~hp~~~~~l~~La~l~~~~g~~~ 288 (335)
++..|..+..-+..| +|....|+++|+.-.+.++.. - +.+..+.. .-.-+.-+|.++...|..+
T Consensus 56 L~~lNT~Ts~YYk~L--Cy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~D--kEfFy~l~a~lltq~g~r~ 131 (242)
T 3kae_A 56 LHKLNTCTSKYYESL--CYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGD--EEFFESLLGDLCTLSGYRE 131 (242)
T ss_dssp HHTCCBHHHHHHHHH--HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTC--HHHHHHHHHHHHHHTTCHH
T ss_pred HHhcchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccch--HHHHHHHHHHHHHHhcCHH
Confidence 344455444444333 577889999999988887731 1 11111111 2244567799999999999
Q ss_pred HHHHHHHHHHHh
Q 019809 289 NAIKSMTEAVEI 300 (335)
Q Consensus 289 eA~~~l~~A~~i 300 (335)
||+.++.....+
T Consensus 132 EaI~y~~~Sf~~ 143 (242)
T 3kae_A 132 EGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhhHhhhhcCC
Confidence 999998876543
No 310
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.19 E-value=1.7e+02 Score=27.05 Aligned_cols=70 Identities=14% Similarity=-0.006 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH-HHHHHHHhHHHHhcCChHHHHHHHHHHHHh
Q 019809 228 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 300 (335)
Q Consensus 228 l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~-~~~l~~La~l~~~~g~~~eA~~~l~~A~~i 300 (335)
.++....|+..|...|+|.+|..+...+. ...++...... .-.+....+++...+++..|..++.+|...
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~---~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQ---VETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHH---HHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHH---HHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 45566789999999999999999877764 34566544433 345666788899999999999999998543
No 311
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=41.70 E-value=5 Score=27.48 Aligned_cols=50 Identities=18% Similarity=0.381 Sum_probs=29.0
Q ss_pred cCccCCCCCCcceecCCCCCccccCcCCCCCcHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHH
Q 019809 145 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKM 212 (335)
Q Consensus 145 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~ 212 (335)
.++|+ |+.............|. ||.......+ ..+...+++++|.++-.+
T Consensus 4 vv~C~---C~~~~~~~~~~kT~~C~-CG~~~~~~k~--------------rif~~~~d~~eA~e~~~~ 53 (71)
T 1gh9_A 4 IFRCD---CGRALYSREGAKTRKCV-CGRTVNVKDR--------------RIFGRADDFEEASELVRK 53 (71)
T ss_dssp EEEET---TSCCEEEETTCSEEEET-TTEEEECCSS--------------SCBSCCSSHHHHHHHHHH
T ss_pred EEECC---CCCEEEEcCCCcEEECC-CCCeeeeceE--------------EEEEecCCHHHHHHHHHH
Confidence 35663 76666555555666898 9986654322 123345567777665443
No 312
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=41.40 E-value=55 Score=28.39 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhccc--CCCChhHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHH
Q 019809 204 QEVVSTYKMIEKLQKKLY--HPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 258 (335)
Q Consensus 204 ~ea~~l~~~~l~l~~~~l--~~~h~~l~~~~~~L~~~~~~-~~~~~~Al~~~~~~l~~ 258 (335)
+.+...|+.+..+...-+ +|.||..+.+..+.+.-|.+ +++-++|..+.+++.+-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 455667888877766668 99999888877777766654 68889999999888765
No 313
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=41.24 E-value=53 Score=25.52 Aligned_cols=23 Identities=4% Similarity=-0.302 Sum_probs=10.7
Q ss_pred HHHhcCCCChHHHHHHHHHhHHH
Q 019809 259 YQRVYPQFHPLLGLQYYTCGKLE 281 (335)
Q Consensus 259 ~~~~~p~~hp~~~~~l~~La~l~ 281 (335)
.+..-...+|--|..|.++|++.
T Consensus 17 ~~ATs~d~~~~pgylm~EIA~~T 39 (140)
T 1vdy_A 17 DAVTSDEDKVAPVYKLEEICDLL 39 (140)
T ss_dssp HHTTCSCSSCCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCCcHHHHHHHHHHH
Confidence 33333444444455555555543
No 314
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=41.21 E-value=88 Score=31.46 Aligned_cols=52 Identities=13% Similarity=0.120 Sum_probs=40.4
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHH
Q 019809 236 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMT 295 (335)
Q Consensus 236 ~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~ 295 (335)
++-+...|+++-|+++.+++.... |.-=..++.||++|..+|+++.|+-.+-
T Consensus 344 a~FLl~K~~~elAL~~Ak~AV~~a--------PseF~tW~~La~vYi~l~d~e~ALLtLN 395 (754)
T 4gns_B 344 TNFLLNRGDYELALGVSNTSTELA--------LDSFESWYNLARCHIKKEEYEKALFAIN 395 (754)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC--------SSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhccCcHHHHHHHHHHHHhcC--------chhhHHHHHHHHHHHHhccHHHHHHHHh
Confidence 444567899999999999887643 2222568999999999999999987544
No 315
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=40.71 E-value=1.3e+02 Score=23.75 Aligned_cols=64 Identities=11% Similarity=0.051 Sum_probs=40.7
Q ss_pred HHhchhHHHHHHHHHHHHHHHHHhcCCC----ChHHHHHH-HHHhHHHHhcCChHHHHHHHHHHHHhhhhhcC
Q 019809 239 LMELEDWKEALAYCQLTIPVYQRVYPQF----HPLLGLQY-YTCGKLEWFLGDTENAIKSMTEAVEILRITHG 306 (335)
Q Consensus 239 ~~~~~~~~~Al~~~~~~l~~~~~~~p~~----hp~~~~~l-~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G 306 (335)
+...|+|=+|=+. ++..-+-.+.. ....|+.. .-.|..++..|+...|..++.+|+..++....
T Consensus 42 lFn~g~yfeaHEv----LEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~ 110 (161)
T 2ijq_A 42 LYNSGEFHESHDC----FEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPN 110 (161)
T ss_dssp HHHTTCHHHHHHH----HHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCT
T ss_pred HHhCCCchHHHHH----HHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCC
Confidence 3444777666443 33333333322 22345555 55666677789999999999999999987643
No 316
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.32 E-value=56 Score=30.20 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhh
Q 019809 230 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 303 (335)
Q Consensus 230 ~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~ 303 (335)
.+...++..|.+.|++++|.+.+.++.+ ...+..|. .-.++.+..++...+++..+..++.+|..+...
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~---~~~~~~~k--id~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLS---KAISTGAK--IDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHH---HHTCCCSH--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH---hcCChHHH--HHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 3456788899999999999999888654 34555543 345666777888899999999999999877654
No 317
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=38.59 E-value=18 Score=24.51 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=24.9
Q ss_pred hhhhcCccCCCCCCcceecCCCCCccccCcCCCCCc
Q 019809 141 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 176 (335)
Q Consensus 141 ~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 176 (335)
.+++-+.|+ .|+|.+....+.....|..||....
T Consensus 4 ~LLeiL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (69)
T 2pk7_A 4 KLLDILACP--ICKGPLKLSADKTELISKGAGLAYP 37 (69)
T ss_dssp CGGGTCCCT--TTCCCCEECTTSSEEEETTTTEEEE
T ss_pred HHHhheeCC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 356778896 5888887666666678999987554
No 318
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=37.15 E-value=24 Score=24.47 Aligned_cols=29 Identities=38% Similarity=0.911 Sum_probs=21.0
Q ss_pred cCccCCCCCCcceecCCCCCccccC-----cCCC
Q 019809 145 GYRCKDDGCSGFLLRDSDDKGFTCQ-----QCGL 173 (335)
Q Consensus 145 ~~~C~~~~C~g~~~~~~~~~~~~C~-----~C~~ 173 (335)
...||.+.|+..+....+.....|. .||.
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~ 58 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGF 58 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSC
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCC
Confidence 5679888898777665555567787 7775
No 319
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=37.14 E-value=2.4e+02 Score=25.51 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=27.3
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 304 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~ 304 (335)
.+.+++..|..+...+++.+|+..|+.|.+.++..
T Consensus 252 ~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a 286 (376)
T 3r9m_A 252 TAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKA 286 (376)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 36666777777778899999999998888877633
No 320
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=36.31 E-value=24 Score=24.08 Aligned_cols=29 Identities=21% Similarity=0.452 Sum_probs=17.7
Q ss_pred cCccCCCCCCcceecCCCCCccccCcCCCCC
Q 019809 145 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 175 (335)
Q Consensus 145 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 175 (335)
.+.|+ .|+..-+......-|.|.+|+...
T Consensus 26 ky~C~--fCgk~~vkR~a~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 26 RYDCS--FCGKKTVKRGAAGIWTCSCCKKTV 54 (72)
T ss_dssp CBCCS--SCCSSCBSBCSSSCBCCSSSCCCC
T ss_pred CccCC--CCCCceeEecCCCeEECCCCCCEE
Confidence 45563 465433333345679999999755
No 321
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=36.23 E-value=1.3e+02 Score=22.19 Aligned_cols=70 Identities=16% Similarity=0.273 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHH-------Hhhccc--------CCCChhHHHHHHHHHHHHHhchhHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEK-------LQKKLY--------HPFSVNLMQTREKLIKILMELEDWKEALA 250 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~-------l~~~~l--------~~~h~~l~~~~~~L~~~~~~~~~~~~Al~ 250 (335)
..++..-.|......|+|++|.++.+.+.+ .+++++ .+.+..+.++.+.|+.+... ..
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~~AH~~QT~Liq~Ea~g~~~~~slLlvHAQDhLMta~~~-------~~ 93 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEAINEAHHFQTELIQSEARGEKTEISVLLIHAQDHLMNAITV-------KE 93 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeehhHHHHHHHHHHH-------HH
Confidence 455666677777788999999888776543 122221 24466778888888876653 34
Q ss_pred HHHHHHHHHHHh
Q 019809 251 YCQLTIPVYQRV 262 (335)
Q Consensus 251 ~~~~~l~~~~~~ 262 (335)
+.+.++++|+++
T Consensus 94 la~e~I~lyk~~ 105 (109)
T 3k1s_A 94 LAAEFIDLYKKL 105 (109)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555666666654
No 322
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.12 E-value=14 Score=25.63 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=15.0
Q ss_pred EEEeccccCCCCeEEEee
Q 019809 84 VVRAVQHVPKGAEVLISY 101 (335)
Q Consensus 84 ~~~a~~~i~~g~el~~~Y 101 (335)
.++|.++|++|+.|+-.=
T Consensus 8 slvA~rdI~~Gevit~~d 25 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDM 25 (79)
T ss_dssp EEEESSCBCTTCBCCGGG
T ss_pred EEEEeCccCCCCCcCHHH
Confidence 678999999999987544
No 323
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=34.80 E-value=21 Score=24.02 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=24.5
Q ss_pred hhhhcCccCCCCCCcceecCCCCCccccCcCCCCCc
Q 019809 141 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 176 (335)
Q Consensus 141 ~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 176 (335)
.+++-+.|+ .|+|.+..........|..||....
T Consensus 6 ~LLeiL~CP--~ck~~L~~~~~~g~LvC~~c~~~YP 39 (67)
T 2jny_A 6 QLLEVLACP--KDKGPLRYLESEQLLVNERLNLAYR 39 (67)
T ss_dssp GGTCCCBCT--TTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HHHHHhCCC--CCCCcCeEeCCCCEEEcCCCCcccc
Confidence 456778886 5888877766666678999987543
No 324
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=33.77 E-value=93 Score=28.92 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=28.4
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY 259 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~ 259 (335)
++.-..+...++++|+..++|++|..++.+++...
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 44445566778999999999999999999998753
No 325
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.59 E-value=2.7e+02 Score=25.18 Aligned_cols=72 Identities=15% Similarity=0.099 Sum_probs=50.3
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhcCC--------CChH-HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCC
Q 019809 237 KILMELEDWKEALAYCQLTIPVYQRVYPQ--------FHPL-LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 307 (335)
Q Consensus 237 ~~~~~~~~~~~Al~~~~~~l~~~~~~~p~--------~hp~-~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~ 307 (335)
.+.....+.++|+++...+.......+.. .+.. .......++..+...|+..+|+.++.++...+...-|.
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 34455678889999888765544443321 1111 23455677888889999999999999999998887555
Q ss_pred C
Q 019809 308 N 308 (335)
Q Consensus 308 ~ 308 (335)
+
T Consensus 164 ~ 164 (393)
T 4b4t_O 164 P 164 (393)
T ss_dssp S
T ss_pred c
Confidence 4
No 326
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=33.16 E-value=2.9e+02 Score=25.69 Aligned_cols=60 Identities=15% Similarity=-0.056 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHHHHHhcc
Q 019809 268 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 268 p~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~~~el~~ 328 (335)
|.+...-+..|..+...|...+|.+|.+....+++.. +...++...+...|+++..-|+.
T Consensus 353 p~l~~yKl~~A~~Lae~G~~~~A~~Ycdai~~~lk~~-~k~s~~~~~l~~~l~~L~~RL~~ 412 (441)
T 3mzk_B 353 SSILPQKIYHASLLQEQGLNSLGTKYTDYLSSSVRKL-PKKDILTINLTRELSEVASRLSE 412 (441)
T ss_dssp GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-CTTSHHHHHHHHHHHHHHHHTC-
T ss_pred hhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhC-CCCCCcCHHHHHHHHHHHHHHhc
Confidence 4343334444666777899999999888777777655 55566777788888888776654
No 327
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=33.07 E-value=1.2e+02 Score=20.98 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhc
Q 019809 183 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 219 (335)
Q Consensus 183 ~~~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~ 219 (335)
+.+....+...|......|++++|+.+|..+++....
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4556666777888888999999999999998775433
No 328
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=32.64 E-value=70 Score=22.84 Aligned_cols=77 Identities=16% Similarity=0.071 Sum_probs=44.1
Q ss_pred HHhchhHHHHHHHHHHHHHHHHHhcCC--CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHH
Q 019809 239 LMELEDWKEALAYCQLTIPVYQRVYPQ--FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 316 (335)
Q Consensus 239 ~~~~~~~~~Al~~~~~~l~~~~~~~p~--~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~ 316 (335)
+...|+|=+|=+..+ ..-+-.+. .....|+...-.|..+...|+. |..++.+|+..++...+. +.-.++.
T Consensus 11 lfn~g~~~eaHEvlE----~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~~--~~gidv~ 82 (94)
T 2cwy_A 11 LWRAGRYYEVHEVLE----PYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPCP--LMGLDWR 82 (94)
T ss_dssp HHHTTCHHHHHHHHH----HHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCSS--BTTBCHH
T ss_pred HHhCCChHHHHHHHH----HHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCCc--cCCcCHH
Confidence 334477766644333 22222322 2233466555566666667888 999999999999876432 3334444
Q ss_pred HHHHHHH
Q 019809 317 LKLEEAQ 323 (335)
Q Consensus 317 ~~l~~~~ 323 (335)
..+..++
T Consensus 83 ~L~~~~~ 89 (94)
T 2cwy_A 83 SLLQEAR 89 (94)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 329
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=32.44 E-value=98 Score=28.83 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=28.0
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 258 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~ 258 (335)
++.-.-++..++++|+..++|++|..++.+++..
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4444556677899999999999999999999874
No 330
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=32.33 E-value=1.4e+02 Score=21.64 Aligned_cols=70 Identities=14% Similarity=0.182 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHH-------Hhhccc--------CCCChhHHHHHHHHHHHHHhchhHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEK-------LQKKLY--------HPFSVNLMQTREKLIKILMELEDWKEALA 250 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~-------l~~~~l--------~~~h~~l~~~~~~L~~~~~~~~~~~~Al~ 250 (335)
..++..-.|......|+|++|.++.+.+.+ .+++++ .+.+..+.++.+.|+.+... ..
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~AH~~Qt~liq~Ea~g~~~~~slLlvHAQDhLMta~~~-------~~ 89 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQLHLMTSMLA-------RE 89 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSSCCSCCHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeehhHHHHHHHHHHH-------HH
Confidence 455666677777788999999888776543 222221 23466778899999876653 34
Q ss_pred HHHHHHHHHHHh
Q 019809 251 YCQLTIPVYQRV 262 (335)
Q Consensus 251 ~~~~~l~~~~~~ 262 (335)
+.+.++++|+++
T Consensus 90 la~e~I~lyk~~ 101 (103)
T 1wcr_A 90 LITELIELHEKL 101 (103)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 556666666654
No 331
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=31.74 E-value=1.3e+02 Score=23.28 Aligned_cols=42 Identities=17% Similarity=0.103 Sum_probs=31.9
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHH
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 313 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~ 313 (335)
.|..+++.|..+..-|+.+.|=-+|-+-..++. .=+.||.++
T Consensus 41 sa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~--kIpkHpdyk 82 (144)
T 2a9u_A 41 SALKIFKTAEECRLDRDEERAYVLYMKYVTVYN--LIKKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HHTTSHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH--HHhcCcchh
Confidence 456677778888888888888888888888873 346788775
No 332
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=31.32 E-value=1.5e+02 Score=21.60 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHH-------hhccc--------CCCChhHHHHHHHHHHHHHhchhHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEKL-------QKKLY--------HPFSVNLMQTREKLIKILMELEDWKEALA 250 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l-------~~~~l--------~~~h~~l~~~~~~L~~~~~~~~~~~~Al~ 250 (335)
..++..-.|......|+|++|.++.+.+.+. +.+++ .+.+..+.++.+.|+.+... ..
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~AH~~Qt~liq~Ea~g~~~~~slLlvHAQDhLMta~~~-------~~ 91 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSCIAEAHSSQTGMLAREASGEELPYSVTMMHGQLHLMTTILL-------KD 91 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeehhHHHHHHHHHHH-------HH
Confidence 4556666777777889999998887665431 22211 24466777888888876553 34
Q ss_pred HHHHHHHHHHHh
Q 019809 251 YCQLTIPVYQRV 262 (335)
Q Consensus 251 ~~~~~l~~~~~~ 262 (335)
+.+.++++|+++
T Consensus 92 la~e~I~lyk~~ 103 (105)
T 2e2a_A 92 VIHHLIELYKRG 103 (105)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555666666653
No 333
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=31.00 E-value=43 Score=23.19 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=27.8
Q ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCC
Q 019809 234 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 266 (335)
Q Consensus 234 ~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~ 266 (335)
.+|+-|.-.|+|+.|+.|+.-++....++....
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~ 49 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLDQMNKYLYSV 49 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhc
Confidence 466778888999999999999999888877644
No 334
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.77 E-value=18 Score=22.80 Aligned_cols=25 Identities=24% Similarity=0.804 Sum_probs=15.2
Q ss_pred ccCCCCCCc-ceecCCCCCccccCcCCCC
Q 019809 147 RCKDDGCSG-FLLRDSDDKGFTCQQCGLV 174 (335)
Q Consensus 147 ~C~~~~C~g-~~~~~~~~~~~~C~~C~~~ 174 (335)
-|| .|+. .+..+ ....+.|.+||.+
T Consensus 21 ~CP--~CG~~~fm~~-~~~R~~C~kCG~t 46 (50)
T 3j20_Y 21 FCP--RCGPGVFMAD-HGDRWACGKCGYT 46 (50)
T ss_dssp ECS--SSCSSCEEEE-CSSEEECSSSCCE
T ss_pred cCC--CCCCceEEec-CCCeEECCCCCCE
Confidence 365 4764 33332 3356899999975
No 335
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=30.25 E-value=20 Score=24.13 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=23.1
Q ss_pred hhhcCccCCCCCCcceecCCCCCccccCcCCCCCc
Q 019809 142 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 176 (335)
Q Consensus 142 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 176 (335)
+++-+.|+ .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2jr6_A 5 FLDILVCP--VTKGRLEYHQDKQELWSRQAKLAYP 37 (68)
T ss_dssp SSCCCBCS--SSCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45677886 5778777665556678988887543
No 336
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=30.16 E-value=22 Score=24.16 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=23.6
Q ss_pred hhhcCccCCCCCCcceecCCCCCccccCcCCCCCc
Q 019809 142 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 176 (335)
Q Consensus 142 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 176 (335)
+++-+.|+ .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (70)
T 2js4_A 5 LLDILVCP--VCKGRLEFQRAQAELVCNADRLAFP 37 (70)
T ss_dssp CCCCCBCT--TTCCBEEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCEEeCCCCEEEcCCCCceec
Confidence 45677886 5888877666556678999987554
No 337
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=30.14 E-value=88 Score=22.20 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCChhHHHHHHHHHHH
Q 019809 243 EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 322 (335)
Q Consensus 243 ~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp~~~~l~~~l~~~ 322 (335)
..+++|..+..+.|..-+.- ...++..|+.+|+ +++..|.+++.|-..-.|+.-...+.++.++.+.
T Consensus 11 ~~h~~AF~~Is~aL~~DE~~-~~G~k~~A~~~Yk------------kGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~n 77 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDEDE-KAGQKEQAVEWYK------------KGIEELEKGIAVIVTGQGEQCERARRLQAKMMTN 77 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-CSSSGGGSHHHHH------------HHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcc-cCCCHHHHHHHHH------------HHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHH
Confidence 34567777777777665543 2345555555553 3344566666665443333333344556665555
Q ss_pred HHHh
Q 019809 323 QAEA 326 (335)
Q Consensus 323 ~~el 326 (335)
...+
T Consensus 78 L~~v 81 (89)
T 3eab_A 78 LVMA 81 (89)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 338
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.13 E-value=1.9e+02 Score=27.40 Aligned_cols=38 Identities=18% Similarity=0.098 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHHh
Q 019809 246 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 283 (335)
Q Consensus 246 ~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~~ 283 (335)
++|++.++++++.+++.-..+.|.....+.++++.|-.
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~ 486 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEM 486 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhh
Confidence 67888899999999999999999998888888887543
No 339
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=29.53 E-value=20 Score=29.16 Aligned_cols=27 Identities=15% Similarity=0.619 Sum_probs=13.6
Q ss_pred ccCCCCCCcceecCCCCCccccCcCCCC
Q 019809 147 RCKDDGCSGFLLRDSDDKGFTCQQCGLV 174 (335)
Q Consensus 147 ~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 174 (335)
.|+...|...+... ++..|.|++|+..
T Consensus 45 aC~~~~CnKKv~~~-~~g~~~CekC~~~ 71 (181)
T 1l1o_C 45 ACPTQDCNKKVIDQ-QNGLYRCEKCDTE 71 (181)
T ss_dssp BCCSTTCCCBCEEE-TTTEEEETTTTEE
T ss_pred CCCchhcCCccccC-CCCeEECCCCCCc
Confidence 45544455444422 2234677777653
No 340
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=29.51 E-value=1.7e+02 Score=23.02 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=27.0
Q ss_pred CChHHHHHHHHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 266 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 266 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
+.+.-+-.++++|.+|...|...+|.+++.+|-+
T Consensus 120 n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 120 NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp -CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3433445688999999999999999999998843
No 341
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=29.37 E-value=3.1e+02 Score=24.51 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=46.0
Q ss_pred ChHHHHHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHHhch-----hHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 019809 202 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 276 (335)
Q Consensus 202 ~~~ea~~l~~~~l~l~~~~l~~~h~~l~~~~~~L~~~~~~~~-----~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~ 276 (335)
++++++..+.+++. .+|.|...-.-+..+...+.... .+.++++++.++++. +|.--.+++.
T Consensus 140 ~~~~EL~~~~k~L~-----~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~--------dp~N~SAW~~ 206 (349)
T 3q7a_A 140 DPVSEIEYIHGSLL-----PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV--------DGRNNSAWGW 206 (349)
T ss_dssp CCHHHHHHHHHHTS-----SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred ChHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh--------CCCCHHHHHH
Confidence 55666666655543 35556554333333333222211 234888888887763 2322344555
Q ss_pred HhHHHHhcCC-------hHHHHHHHHHHHH
Q 019809 277 CGKLEWFLGD-------TENAIKSMTEAVE 299 (335)
Q Consensus 277 La~l~~~~g~-------~~eA~~~l~~A~~ 299 (335)
.+.+...+++ ++++++++.+|+.
T Consensus 207 R~~lL~~l~~~~~~~~~~~eELe~~~~aI~ 236 (349)
T 3q7a_A 207 RWYLRVSRPGAETSSRSLQDELIYILKSIH 236 (349)
T ss_dssp HHHHHTTSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 5666666665 5777777777654
No 342
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=29.28 E-value=1.8e+02 Score=21.80 Aligned_cols=68 Identities=7% Similarity=0.107 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHH-------Hhhccc--------CCCChhHHHHHHHHHHHHHhchhHHHHHH
Q 019809 186 EVNILSKKTLALTSCGNHQEVVSTYKMIEK-------LQKKLY--------HPFSVNLMQTREKLIKILMELEDWKEALA 250 (335)
Q Consensus 186 ~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~-------l~~~~l--------~~~h~~l~~~~~~L~~~~~~~~~~~~Al~ 250 (335)
..++..-.|......|+|++|.++.+.+.+ .+..++ .+.+..+.++.+.|+.+... ..
T Consensus 36 ~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l~~AH~~QT~Liq~EA~G~~~~~sLLlvHAQDhLMta~~~-------~d 108 (120)
T 3l8r_A 36 NARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLLQEYASGTEIKIEIIMVHAQDHLMTTMTL-------RE 108 (120)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccceeeehHHHHHHHHHHH-------HH
Confidence 456666677777788999999988776543 122221 24466777888888876553 34
Q ss_pred HHHHHHHHHH
Q 019809 251 YCQLTIPVYQ 260 (335)
Q Consensus 251 ~~~~~l~~~~ 260 (335)
+.+.++++|+
T Consensus 109 La~e~I~lyk 118 (120)
T 3l8r_A 109 VAIEMLELYK 118 (120)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4455555554
No 343
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=28.95 E-value=21 Score=24.08 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=23.2
Q ss_pred hhhcCccCCCCCCcceecCCCCCccccCcCCCCCc
Q 019809 142 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 176 (335)
Q Consensus 142 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 176 (335)
+++-+.|+ .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2hf1_A 5 FLEILVCP--LCKGPLVFDKSKDELICKGDRLAFP 37 (68)
T ss_dssp CEEECBCT--TTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45677886 5778777665556678988987543
No 344
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=28.79 E-value=1.2e+02 Score=21.73 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcC-CCChH
Q 019809 227 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHPL 269 (335)
Q Consensus 227 ~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p-~~hp~ 269 (335)
..++.....+..+...|.|++|++..+++...+..-+- ..++.
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~q 56 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQ 56 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 44667777888999999999999998888765543332 34444
No 345
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=28.57 E-value=42 Score=24.56 Aligned_cols=13 Identities=15% Similarity=0.437 Sum_probs=9.3
Q ss_pred CCccccCcCCCCC
Q 019809 163 DKGFTCQQCGLVR 175 (335)
Q Consensus 163 ~~~~~C~~C~~~~ 175 (335)
..-|.|.+|+...
T Consensus 52 ~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 52 VGIWKCKPCKKII 64 (103)
T ss_dssp TTEEEETTTTEEE
T ss_pred cceEEcCCCCCEE
Confidence 4568999997633
No 346
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=27.38 E-value=2.6e+02 Score=25.79 Aligned_cols=50 Identities=20% Similarity=0.173 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHhHHHH
Q 019809 231 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 282 (335)
Q Consensus 231 ~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~~ 282 (335)
.+...+..+...+.|+.|+.+|+.++..|+.. .+--.++..+..++++|.
T Consensus 90 ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~--~dy~~Ls~~~~~~a~~y~ 139 (428)
T 2wm9_A 90 LLEQCADGLWKAERYELIADIYKLIIPIYEKR--RDFERLAHLYDTLHRAYS 139 (428)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHH
Confidence 34445556667788999999999999999986 343444555555555543
No 347
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=27.36 E-value=1.6e+02 Score=20.50 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=24.6
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHhhc
Q 019809 188 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 219 (335)
Q Consensus 188 ~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~ 219 (335)
..+...|......|++++|+.+|..++.....
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34556677777889999999999998876443
No 348
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=27.27 E-value=58 Score=22.18 Aligned_cols=28 Identities=25% Similarity=0.488 Sum_probs=17.1
Q ss_pred CccccCcCCCCC-cHHHHHHHHHHHHHHH
Q 019809 164 KGFTCQQCGLVR-SKEEIKKIASEVNILS 191 (335)
Q Consensus 164 ~~~~C~~C~~~~-~~~~~~~~~~~~~~l~ 191 (335)
..|.|..||... +.+..+++.+.+..+.
T Consensus 35 p~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 35 HGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp EEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred eeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 468999999755 4455555444444333
No 349
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=26.82 E-value=3.9e+02 Score=24.91 Aligned_cols=19 Identities=11% Similarity=0.041 Sum_probs=14.4
Q ss_pred cCCCChhHHHHHHHHHHHH
Q 019809 305 HGTNSPFMKELILKLEEAQ 323 (335)
Q Consensus 305 ~G~~hp~~~~l~~~l~~~~ 323 (335)
|--|+..+.+++..|+++.
T Consensus 172 y~VD~~~Ye~~QKqLeQv~ 190 (491)
T 1m1j_A 172 YQVDKEGYDNIQKHLTQAS 190 (491)
T ss_dssp CCCCTTTTHHHHHHHHHHT
T ss_pred hhhcHHHHHHHHHHHHHhh
Confidence 5567778888888888874
No 350
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=26.78 E-value=3.6e+02 Score=24.38 Aligned_cols=59 Identities=17% Similarity=-0.026 Sum_probs=36.7
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcC-----CCChhHHHHHHHHHHHHHHhcc
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG-----TNSPFMKELILKLEEAQAEASY 328 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G-----~~hp~~~~l~~~l~~~~~el~~ 328 (335)
.|.+++..|..+...+++.+|+..|+.|.+.++.... +++.....+...++........
T Consensus 256 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~~~d~~~l~~~i~~~l~~a~k 319 (392)
T 1zb1_A 256 KSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSLPFKTWLVEFIDFDGFKETLEKKQKELIK 319 (392)
T ss_dssp HHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHGGGCTTTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Confidence 4556666677777788999999999998887765431 2233344444555444444333
No 351
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=26.75 E-value=54 Score=23.48 Aligned_cols=13 Identities=31% Similarity=0.769 Sum_probs=9.6
Q ss_pred CCccccCcCCCCC
Q 019809 163 DKGFTCQQCGLVR 175 (335)
Q Consensus 163 ~~~~~C~~C~~~~ 175 (335)
..-|.|.+|+...
T Consensus 52 ~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 52 VGIWGCKDCGKVK 64 (92)
T ss_dssp TTEEECSSSCCEE
T ss_pred cceEEcCCCCCEE
Confidence 4569999998743
No 352
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=26.17 E-value=1.1e+02 Score=28.53 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=27.8
Q ss_pred ChhHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Q 019809 225 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 258 (335)
Q Consensus 225 h~~l~~~~~~L~~~~~~~~~~~~Al~~~~~~l~~ 258 (335)
++.-..++..++++|+..++|++|..++.+++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3444456677899999999999999999999874
No 353
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.07 E-value=27 Score=22.10 Aligned_cols=27 Identities=26% Similarity=0.602 Sum_probs=17.8
Q ss_pred hhhcCccCCCCCCcceecCCCCCccccCcCCCC
Q 019809 142 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 174 (335)
Q Consensus 142 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 174 (335)
.+....|+ .|+..+ ....|.|.+||..
T Consensus 11 ~~~k~iCp--kC~a~~----~~gaw~CrKCG~~ 37 (51)
T 3j21_g 11 IFKKYVCL--RCGATN----PWGAKKCRKCGYK 37 (51)
T ss_dssp SSSEEECT--TTCCEE----CTTCSSCSSSSSC
T ss_pred HhCCccCC--CCCCcC----CCCceecCCCCCc
Confidence 34556675 476552 3457999999985
No 354
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=26.04 E-value=90 Score=25.47 Aligned_cols=64 Identities=17% Similarity=0.249 Sum_probs=46.3
Q ss_pred HhccccccccCCCCceeeEeccccccc-ccCCccCcEEEEeCCEEEE---EeccccCCC--CeEEEeecCCC
Q 019809 40 LACNAHTICNSELRPLGTGLYPVISII-NHSCLPNAVLVFEGRLAVV---RAVQHVPKG--AEVLISYIETA 105 (335)
Q Consensus 40 ~~~N~~~~~~~~~~~~g~~~~~~~s~~-nHsC~pn~~~~~~~~~~~~---~a~~~i~~g--~el~~~Y~~~~ 105 (335)
+.-|.++|+.....--|.|||-...++ .|+ .|--.+..+|....+ ..+.+ +.| .||++=+++..
T Consensus 15 ~~~N~~~vtt~~g~ft~LgI~dr~~vvP~Ha-~~~~~i~i~g~~~~v~d~~~L~~-~~g~~~Elt~v~l~~~ 84 (187)
T 3qzr_A 15 LRRNVRQVQTDQGHFTMLGVRDRLAVLPRHS-QPGKTIWIEHKLVNVLDAVELVD-EQGVNLALTLITLDTN 84 (187)
T ss_dssp HHHHEEEEEETTEEEEEEEEEBTEEEEEGGG-CCCSEEEETTEEEEEEEEEECCC-TTCCCCSEEEEEECSS
T ss_pred HHcCeEEEEECCCeEEEEEEeeeEEEEeCCC-CCCCEEEECCEEEEeeeeEEEEC-CCCCEEEEEEEEcCCC
Confidence 447899998876666789999997766 788 776667778877666 33332 335 59999998764
No 355
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=25.55 E-value=82 Score=25.87 Aligned_cols=32 Identities=22% Similarity=0.118 Sum_probs=27.8
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 301 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il 301 (335)
....+|-+|+++...+++.+|...|.+|+.-.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~ 44 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 44 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHC
Confidence 45567889999999999999999999998853
No 356
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=24.06 E-value=62 Score=23.16 Aligned_cols=13 Identities=23% Similarity=0.406 Sum_probs=9.5
Q ss_pred CCccccCcCCCCC
Q 019809 163 DKGFTCQQCGLVR 175 (335)
Q Consensus 163 ~~~~~C~~C~~~~ 175 (335)
..-|.|.+|+...
T Consensus 52 ~GIW~C~~C~~~~ 64 (92)
T 3izc_m 52 AGIWTCSCCKKTV 64 (92)
T ss_dssp TTEEECTTTCCEE
T ss_pred cceEEcCCCCCEE
Confidence 4569999998643
No 357
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=23.21 E-value=85 Score=21.35 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=20.3
Q ss_pred HHHhHHHHhcCChHHHHHHHHHHHH
Q 019809 275 YTCGKLEWFLGDTENAIKSMTEAVE 299 (335)
Q Consensus 275 ~~La~l~~~~g~~~eA~~~l~~A~~ 299 (335)
..+|..+...|.+++|..++-+|+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~ 45 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIA 45 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3567777888899999998888876
No 358
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=22.70 E-value=1.6e+02 Score=26.80 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=34.3
Q ss_pred HHHHHHHHhHHHHhcCChHHHHHHHHHHHHhhhhhcCCCCh
Q 019809 270 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 310 (335)
Q Consensus 270 ~~~~l~~La~l~~~~g~~~eA~~~l~~A~~il~~~~G~~hp 310 (335)
.+..++++|.-++..|++++|.-+|..|..++.-.-=|-|.
T Consensus 97 ~~~ky~~~A~~~~~~g~~~~A~~~LG~a~Hy~~D~~~P~Ha 137 (370)
T 2wxu_A 97 QIRKFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHP 137 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTSSTTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCCCCccc
Confidence 34677888888899999999999999999999887777776
No 359
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=22.46 E-value=1.9e+02 Score=19.77 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhc
Q 019809 185 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 219 (335)
Q Consensus 185 ~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~ 219 (335)
.....+...|......|++++|+.+|..+......
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34455666677777889999999999998775433
No 360
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=22.42 E-value=2.3e+02 Score=27.63 Aligned_cols=51 Identities=8% Similarity=-0.149 Sum_probs=24.9
Q ss_pred HHHhchhHHHHHHHHHHHHH-----HHHHhcCCCChHHHHHHHHHhHHHHhcCChH
Q 019809 238 ILMELEDWKEALAYCQLTIP-----VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTE 288 (335)
Q Consensus 238 ~~~~~~~~~~Al~~~~~~l~-----~~~~~~p~~hp~~~~~l~~La~l~~~~g~~~ 288 (335)
+|...|++++|++++.++-. .+.+.+++....+.......+.-+...|+..
T Consensus 745 ~~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~~L~~~~~~~ 800 (814)
T 3mkq_A 745 AYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLILNGKNT 800 (814)
T ss_dssp HHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHcCCHHHHHHHHHHcCChHHHHHHHHHhCCChHHHHHHHHHHHHHHHhccchh
Confidence 45667777777777665432 1122344444223333333444444555543
No 361
>2exd_A NFED short homolog; membrane protein; NMR {Pyrococcus horikoshii} SCOP: b.40.12.1
Probab=22.38 E-value=64 Score=22.29 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=25.0
Q ss_pred cEEEEeCCEEEEEeccccCCCCeEEEeecCC
Q 019809 74 AVLVFEGRLAVVRAVQHVPKGAEVLISYIET 104 (335)
Q Consensus 74 ~~~~~~~~~~~~~a~~~i~~g~el~~~Y~~~ 104 (335)
=.+.|+|..+..++-.+|++|+.+.+-=++-
T Consensus 31 G~V~i~Ge~W~A~s~~~i~~G~~V~Vv~veG 61 (80)
T 2exd_A 31 YLVEVEGDKWIAYSDEKLSLGDRVMVVDVDG 61 (80)
T ss_dssp EEEEETTEEEEECCSSCCCTTCEEEEEEECS
T ss_pred EEEEECCEEEEEEECCccCCCCEEEEEEEEC
Confidence 4567788888888888899999998876653
No 362
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=22.29 E-value=2.4e+02 Score=21.25 Aligned_cols=25 Identities=20% Similarity=0.123 Sum_probs=14.7
Q ss_pred hHHHHhcCChHHHHHHHHHHHHhhh
Q 019809 278 GKLEWFLGDTENAIKSMTEAVEILR 302 (335)
Q Consensus 278 a~l~~~~g~~~eA~~~l~~A~~il~ 302 (335)
|+.....|+++++-..+.||.+|+.
T Consensus 43 A~~ai~~~d~~~k~~~i~KA~~Ii~ 67 (131)
T 3iqc_A 43 AKRCIENEDIEKKIYYINRVTDIFT 67 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4444455666666666666666554
No 363
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=21.87 E-value=41 Score=33.97 Aligned_cols=30 Identities=17% Similarity=0.470 Sum_probs=16.4
Q ss_pred CccCCCCCCcceecC----CCCCccccCcCCCCC
Q 019809 146 YRCKDDGCSGFLLRD----SDDKGFTCQQCGLVR 175 (335)
Q Consensus 146 ~~C~~~~C~g~~~~~----~~~~~~~C~~C~~~~ 175 (335)
.+|.++.|++++.|- ...+.|+|+-|+...
T Consensus 54 vRC~~~~CrayiNPf~~~~~~~~~W~C~~C~~~N 87 (768)
T 1m2o_A 54 VVCSGPHCKSILNPYCVIDPRNSSWSCPICNSRN 87 (768)
T ss_dssp CBCCSTTTCCBCCTTSCEETTTTEECCTTTCCCC
T ss_pred CccCCCCCCeEECCceEEeCCCCEEEcccCCCCC
Confidence 345433355544332 335678888887644
No 364
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.41 E-value=23 Score=24.88 Aligned_cols=29 Identities=21% Similarity=0.470 Sum_probs=16.1
Q ss_pred cCccCCCCCCcceecCCCCCccccCcCCCCC
Q 019809 145 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 175 (335)
Q Consensus 145 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 175 (335)
.+.|+ .|+..-+......-|.|.+|+...
T Consensus 35 ky~Cp--fCGk~~vkR~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 35 KHTCP--VCGRKAVKRISTGIWQCQKCGATF 63 (83)
T ss_dssp CBCCS--SSCSSCEEEEETTEEEETTTCCEE
T ss_pred ccCCC--CCCCceeEecCcCeEEcCCCCCEE
Confidence 34553 454332222234569999998754
No 365
>4ard_A Capsid protein P27; viral protein, retrovirus, GAG; 7.00A {Mason-pfizer monkey virus}
Probab=21.29 E-value=98 Score=23.13 Aligned_cols=19 Identities=11% Similarity=0.396 Sum_probs=16.7
Q ss_pred hhcCCCChhHHHHHHHHHH
Q 019809 303 ITHGTNSPFMKELILKLEE 321 (335)
Q Consensus 303 ~~~G~~hp~~~~l~~~l~~ 321 (335)
..||+.+|+++.+++.|..
T Consensus 14 t~YG~ts~y~~~lL~~la~ 32 (116)
T 4ard_A 14 SQYGATAPYTLAIVESVAD 32 (116)
T ss_pred HHhCCChHHHHHHHHHHHH
Confidence 4689999999999998876
No 366
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=21.15 E-value=4.9e+02 Score=23.98 Aligned_cols=92 Identities=21% Similarity=0.180 Sum_probs=50.2
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhcccCCCC----------------hhHH-HHHHHHHHHHHhchhHHHHH
Q 019809 187 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS----------------VNLM-QTREKLIKILMELEDWKEAL 249 (335)
Q Consensus 187 ~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l~~~~l~~~h----------------~~l~-~~~~~L~~~~~~~~~~~~Al 249 (335)
+..+...+......++|-||.--+.....+.. |.+.. .... ..+..++..+...+.|+.|+
T Consensus 35 i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~--w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai 112 (436)
T 2yin_A 35 IRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLK--WSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAI 112 (436)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC--SSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhC--CCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 34555566666788899887644322222211 11111 0111 12344455556677899999
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHhHHH
Q 019809 250 AYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 281 (335)
Q Consensus 250 ~~~~~~l~~~~~~~p~~hp~~~~~l~~La~l~ 281 (335)
.+|+.++..|+...- +--.++..+..++.+|
T Consensus 113 ~l~k~L~~~yE~~~~-Dy~~Ls~~~~~~a~~y 143 (436)
T 2yin_A 113 SLCKELAEQYEMEIF-DYELLSQNLIQQAKFY 143 (436)
T ss_dssp HHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999987411 2223344444455444
No 367
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.72 E-value=1.2e+02 Score=23.59 Aligned_cols=39 Identities=15% Similarity=0.149 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhcCCCChHH
Q 019809 231 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 270 (335)
Q Consensus 231 ~~~~L~~~~~~~~~~~~Al~~~~~~l~~~~~~~p~~hp~~ 270 (335)
....-|..|...|+.+.|.-++.+...++-...| .||..
T Consensus 42 ~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip-kHpdy 80 (146)
T 2xze_A 42 EIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP-KHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG-GSTTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc-cCccc
Confidence 3344577899999999999999998887765555 36655
No 368
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=20.63 E-value=57 Score=25.04 Aligned_cols=28 Identities=29% Similarity=0.750 Sum_probs=20.2
Q ss_pred ccCCCCCCcceecCCCC----CccccCcCCCCCc
Q 019809 147 RCKDDGCSGFLLRDSDD----KGFTCQQCGLVRS 176 (335)
Q Consensus 147 ~C~~~~C~g~~~~~~~~----~~~~C~~C~~~~~ 176 (335)
-|+ .|++.+.|..+. ..|.|..||....
T Consensus 26 FCP--eCgNmL~pked~~~~~l~~~CrtCgY~~~ 57 (133)
T 3qt1_I 26 FCR--DCNNMLYPREDKENNRLLFECRTCSYVEE 57 (133)
T ss_dssp BCT--TTCCBCBCCBCTTTCCBCCBCSSSCCBCC
T ss_pred eCC--CCCCEeeECccCCCceeEEECCCCCCcEE
Confidence 374 688988887542 3589999998654
No 369
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=20.51 E-value=1.8e+02 Score=20.67 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHH
Q 019809 185 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKL 216 (335)
Q Consensus 185 ~~~~~l~~~a~~~~~~g~~~ea~~l~~~~l~l 216 (335)
..++.++++|..+...++|.+|..+++++..+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 45677788888888999999999999988754
Done!