Query 019816
Match_columns 335
No_of_seqs 400 out of 2277
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 07:32:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 2.3E-24 8E-29 179.3 10.4 131 2-148 6-145 (169)
2 4gpm_A Engineered protein OR26 99.9 2.7E-23 9.4E-28 172.8 10.3 123 1-139 38-161 (169)
3 2jab_A H10-2-G3; HER2, darpin, 99.9 4.8E-23 1.6E-27 164.6 9.5 120 1-136 15-135 (136)
4 1d9s_A Cyclin-dependent kinase 99.9 2.4E-23 8.4E-28 166.3 7.0 121 1-138 13-135 (136)
5 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.1E-22 1.4E-26 155.9 10.3 122 1-138 3-125 (126)
6 3twr_A Tankyrase-2; ankyrin re 99.9 2.4E-22 8.2E-27 165.5 8.5 130 2-146 10-148 (165)
7 1awc_B Protein (GA binding pro 99.9 3.4E-22 1.2E-26 162.7 9.3 119 2-137 4-123 (153)
8 3c5r_A BARD-1, BRCA1-associate 99.9 6.9E-23 2.4E-27 163.7 4.3 119 1-135 11-130 (137)
9 3aaa_C Myotrophin, protein V-1 99.9 3.6E-22 1.2E-26 156.6 8.2 106 1-119 8-114 (123)
10 3v30_A DNA-binding protein rfx 99.9 7.5E-22 2.6E-26 163.6 10.0 133 1-148 3-144 (172)
11 4b93_B Ankyrin repeat domain-c 99.9 1.4E-21 4.7E-26 174.6 11.4 131 1-147 87-226 (269)
12 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.3E-21 4.6E-26 161.9 10.4 120 2-137 16-136 (169)
13 3v31_A Ankyrin repeat family A 99.9 1.2E-21 4.1E-26 161.6 10.1 123 1-139 4-127 (167)
14 3v30_A DNA-binding protein rfx 99.9 1.3E-21 4.4E-26 162.2 10.2 120 1-136 37-157 (172)
15 3f6q_A Integrin-linked protein 99.9 9.2E-22 3.2E-26 164.4 9.1 133 1-148 6-147 (179)
16 1ihb_A P18-INK4C(INK6), cyclin 99.9 7.8E-22 2.7E-26 161.7 8.3 130 2-148 7-146 (162)
17 1bi7_B P16INK4A, MTS1, multipl 99.9 4E-22 1.4E-26 163.0 6.3 122 1-139 13-136 (156)
18 2rfm_A Putative ankyrin repeat 99.9 9.7E-22 3.3E-26 166.0 8.5 123 1-139 36-159 (192)
19 1awc_B Protein (GA binding pro 99.8 2.6E-21 8.8E-26 157.5 10.4 117 1-133 35-152 (153)
20 2rfm_A Putative ankyrin repeat 99.8 1.6E-21 5.4E-26 164.7 9.4 119 1-135 69-188 (192)
21 3v31_A Ankyrin repeat family A 99.8 2.8E-21 9.6E-26 159.4 9.8 119 1-135 37-156 (167)
22 3f6q_A Integrin-linked protein 99.8 4.2E-21 1.4E-25 160.4 10.7 123 1-139 40-163 (179)
23 3ehr_A Osteoclast-stimulating 99.8 8.8E-22 3E-26 170.2 6.5 123 1-139 74-198 (222)
24 3twr_A Tankyrase-2; ankyrin re 99.8 6.1E-21 2.1E-25 157.0 10.3 121 1-138 43-164 (165)
25 1bd8_A P19INK4D CDK4/6 inhibit 99.8 4.5E-21 1.6E-25 156.2 9.5 131 2-148 4-142 (156)
26 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.5E-21 8.6E-26 158.6 7.9 122 1-139 39-162 (162)
27 2y1l_E Darpin-8.4; hydrolase-i 99.8 6.5E-21 2.2E-25 157.8 10.2 120 1-136 48-168 (169)
28 2rfa_A Transient receptor pote 99.8 6.3E-21 2.1E-25 165.5 10.6 127 1-139 38-183 (232)
29 3t8k_A Uncharacterized protein 99.8 3.7E-21 1.3E-25 162.4 8.6 111 1-124 39-167 (186)
30 3jxi_A Vanilloid receptor-rela 99.8 3.5E-21 1.2E-25 170.2 8.4 125 1-138 94-249 (260)
31 2etb_A Transient receptor pote 99.8 4.1E-21 1.4E-25 169.4 8.7 125 1-138 91-245 (256)
32 2f8y_A Notch homolog 1, transl 99.8 1.6E-20 5.4E-25 161.9 11.3 122 1-137 59-181 (223)
33 4b93_B Ankyrin repeat domain-c 99.8 4E-21 1.4E-25 171.6 6.9 120 1-135 120-240 (269)
34 2pnn_A Transient receptor pote 99.8 7.5E-21 2.6E-25 169.5 8.6 126 1-139 102-258 (273)
35 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.1E-20 3.8E-25 153.9 8.4 117 1-135 37-154 (156)
36 1yyh_A HN1;, notch 1, ankyrin 99.8 1.3E-20 4.3E-25 166.3 9.1 132 1-148 58-199 (253)
37 2dzn_A Probable 26S proteasome 99.8 2.9E-20 9.8E-25 160.7 10.9 120 1-135 37-161 (228)
38 3hra_A Ankyrin repeat family p 99.8 2.8E-20 9.5E-25 157.7 10.5 108 2-121 41-150 (201)
39 1yyh_A HN1;, notch 1, ankyrin 99.8 3.4E-20 1.2E-24 163.5 11.1 124 1-139 91-215 (253)
40 3deo_A Signal recognition part 99.8 9.3E-21 3.2E-25 159.1 6.9 107 1-121 45-153 (183)
41 4hbd_A KN motif and ankyrin re 99.8 3.1E-20 1.1E-24 166.3 10.7 120 1-135 112-237 (276)
42 2rfa_A Transient receptor pote 99.8 2.8E-20 9.7E-25 161.4 10.1 122 1-138 4-145 (232)
43 1ikn_D Protein (I-kappa-B-alph 99.8 1.4E-20 4.8E-25 164.0 8.2 135 1-147 46-192 (236)
44 2vge_A RELA-associated inhibit 99.8 1.5E-20 5E-25 163.9 7.9 121 2-138 23-147 (229)
45 1s70_B 130 kDa myosin-binding 99.8 5.9E-20 2E-24 165.4 12.0 130 1-146 74-272 (299)
46 1oy3_D Transcription factor in 99.8 2.3E-20 7.9E-25 166.2 9.1 124 1-139 79-250 (282)
47 3hra_A Ankyrin repeat family p 99.8 3.5E-20 1.2E-24 157.1 9.8 121 1-136 73-200 (201)
48 1dcq_A PYK2-associated protein 99.8 2.8E-20 9.6E-25 166.9 9.7 129 2-145 132-269 (278)
49 2dzn_A Probable 26S proteasome 99.8 4.6E-20 1.6E-24 159.4 10.7 135 1-150 3-151 (228)
50 1oy3_D Transcription factor in 99.8 3.8E-20 1.3E-24 164.8 9.7 142 1-149 10-202 (282)
51 3ui2_A Signal recognition part 99.8 2.3E-20 7.9E-25 164.1 8.0 106 1-120 46-153 (244)
52 2f8y_A Notch homolog 1, transl 99.8 6.2E-20 2.1E-24 158.1 10.5 134 1-149 26-168 (223)
53 3aji_A 26S proteasome non-ATPa 99.8 5E-20 1.7E-24 159.6 9.9 121 1-136 7-128 (231)
54 1ikn_D Protein (I-kappa-B-alph 99.8 3.8E-20 1.3E-24 161.2 8.9 123 2-139 80-209 (236)
55 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.2E-20 4.1E-25 165.3 5.6 104 2-118 39-144 (239)
56 3aji_A 26S proteasome non-ATPa 99.8 7.6E-20 2.6E-24 158.4 10.6 131 1-147 41-180 (231)
57 3ljn_A Hypothetical protein; a 99.8 5.4E-20 1.8E-24 170.7 10.2 122 1-138 139-268 (364)
58 3b7b_A Euchromatic histone-lys 99.8 9.6E-20 3.3E-24 158.4 10.5 119 1-135 45-165 (237)
59 2b0o_E UPLC1; arfgap, structur 99.8 6.6E-20 2.3E-24 166.4 8.7 131 2-147 153-294 (301)
60 2pnn_A Transient receptor pote 99.8 4.6E-20 1.6E-24 164.3 7.2 123 1-135 55-214 (273)
61 1sw6_A Regulatory protein SWI6 99.8 6E-20 2.1E-24 168.4 8.1 124 1-139 132-308 (327)
62 3b7b_A Euchromatic histone-lys 99.8 1.3E-19 4.3E-24 157.7 9.6 135 1-150 78-221 (237)
63 1k1a_A B-cell lymphoma 3-encod 99.8 2.1E-19 7.2E-24 156.4 10.8 123 1-135 47-171 (241)
64 2xai_A ASB-9, ankyrin repeat a 99.8 1.9E-19 6.6E-24 159.5 10.3 120 1-137 4-124 (261)
65 2etb_A Transient receptor pote 99.8 3.1E-20 1.1E-24 163.8 5.0 124 1-136 44-203 (256)
66 1k1a_A B-cell lymphoma 3-encod 99.8 3.5E-20 1.2E-24 161.4 5.2 133 1-149 80-226 (241)
67 3jxi_A Vanilloid receptor-rela 99.8 4.3E-20 1.5E-24 163.1 5.8 124 1-136 47-207 (260)
68 3kea_A K1L; tropism, ANK repea 99.8 1.2E-19 4.1E-24 163.1 8.7 121 1-139 32-154 (285)
69 2xai_A ASB-9, ankyrin repeat a 99.8 2.4E-19 8.3E-24 158.8 10.0 118 1-135 37-155 (261)
70 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.3E-19 4.6E-24 134.7 6.8 84 1-89 3-87 (93)
71 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-19 4.6E-24 140.0 6.4 102 1-115 10-112 (115)
72 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.2E-19 4E-24 158.9 5.9 122 1-139 6-128 (239)
73 1wdy_A 2-5A-dependent ribonucl 99.8 5E-19 1.7E-23 157.3 9.9 124 1-139 6-130 (285)
74 1n11_A Ankyrin; clathrin, BAND 99.8 6.6E-19 2.3E-23 167.2 11.1 121 2-138 247-368 (437)
75 3d9h_A CDNA FLJ77766, highly s 99.8 7E-19 2.4E-23 158.1 10.6 120 1-137 60-180 (285)
76 3utm_A Tankyrase-1; tankyrase, 99.8 1.2E-18 4.2E-23 159.6 11.5 95 1-108 59-154 (351)
77 3lvq_E ARF-GAP with SH3 domain 99.8 5.1E-19 1.8E-23 171.4 9.4 128 2-144 134-272 (497)
78 3jue_A Arfgap with coiled-coil 99.8 4.6E-19 1.6E-23 165.0 8.7 120 2-137 201-324 (368)
79 1n11_A Ankyrin; clathrin, BAND 99.8 6.6E-19 2.3E-23 167.2 10.0 119 1-135 279-398 (437)
80 1wdy_A 2-5A-dependent ribonucl 99.8 1.1E-18 3.7E-23 155.1 10.5 123 1-139 149-278 (285)
81 3d9h_A CDNA FLJ77766, highly s 99.8 1.2E-18 4.2E-23 156.5 10.6 122 1-139 93-215 (285)
82 2fo1_E LIN-12 protein; beta-ba 99.8 8.1E-19 2.8E-23 163.7 9.4 124 1-138 236-370 (373)
83 3kea_A K1L; tropism, ANK repea 99.8 5.2E-19 1.8E-23 159.0 7.4 118 1-135 63-182 (285)
84 1s70_B 130 kDa myosin-binding 99.8 7E-19 2.4E-23 158.3 7.9 117 2-134 42-159 (299)
85 2fo1_E LIN-12 protein; beta-ba 99.8 7.8E-19 2.7E-23 163.9 7.2 126 1-139 126-263 (373)
86 3utm_A Tankyrase-1; tankyrase, 99.7 2.2E-18 7.7E-23 157.9 9.8 123 2-139 26-149 (351)
87 3t8k_A Uncharacterized protein 99.7 7E-19 2.4E-23 148.4 5.7 124 1-138 7-145 (186)
88 3eu9_A Huntingtin-interacting 99.7 6E-18 2.1E-22 146.6 11.1 110 1-122 43-153 (240)
89 3eu9_A Huntingtin-interacting 99.7 3.6E-18 1.2E-22 148.0 8.9 121 1-137 77-200 (240)
90 1bi7_B P16INK4A, MTS1, multipl 99.7 8.7E-19 3E-23 143.0 4.4 104 1-118 46-151 (156)
91 3ljn_A Hypothetical protein; a 99.7 2.4E-18 8.2E-23 159.5 7.7 123 2-139 86-236 (364)
92 4g8k_A 2-5A-dependent ribonucl 99.7 6.2E-18 2.1E-22 155.1 10.0 124 1-139 169-298 (337)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.7 3.2E-18 1.1E-22 127.2 6.5 91 33-138 1-92 (93)
94 1sw6_A Regulatory protein SWI6 99.7 1.3E-18 4.3E-23 159.6 3.0 113 1-121 165-326 (327)
95 4g8k_A 2-5A-dependent ribonucl 99.7 2.4E-17 8.3E-22 151.1 10.9 123 1-138 26-149 (337)
96 2b0o_E UPLC1; arfgap, structur 99.7 3.5E-18 1.2E-22 154.9 4.8 105 1-124 191-299 (301)
97 4hbd_A KN motif and ankyrin re 99.7 2.3E-17 7.9E-22 147.5 5.0 136 1-151 77-228 (276)
98 2vge_A RELA-associated inhibit 99.7 8E-18 2.7E-22 146.5 1.7 106 1-119 55-164 (229)
99 3deo_A Signal recognition part 99.7 1.9E-16 6.4E-21 132.6 9.4 104 1-135 77-180 (183)
100 3c5r_A BARD-1, BRCA1-associate 99.7 1.1E-16 3.7E-21 127.4 6.8 95 29-138 5-100 (137)
101 2zgd_A 3 repeat synthetic anky 99.7 9.2E-17 3.1E-21 123.2 5.9 84 1-89 25-109 (110)
102 1d9s_A Cyclin-dependent kinase 99.7 3.7E-17 1.3E-21 130.1 3.8 83 1-89 46-130 (136)
103 2jab_A H10-2-G3; HER2, darpin, 99.6 1.4E-16 4.7E-21 126.8 6.4 84 1-89 48-132 (136)
104 2l6b_A NR1C; ankyrin, consensu 99.6 2.1E-16 7.3E-21 121.8 6.6 96 29-139 4-100 (115)
105 3lvq_E ARF-GAP with SH3 domain 99.6 2.6E-16 9E-21 152.3 6.6 102 1-121 172-277 (497)
106 1n0r_A 4ANK, 4 ankyrin repeats 99.6 4.5E-16 1.5E-20 121.2 6.5 84 1-89 36-120 (126)
107 1dcq_A PYK2-associated protein 99.6 3.6E-16 1.2E-20 140.1 6.5 84 1-89 170-257 (278)
108 2zgd_A 3 repeat synthetic anky 99.6 2.3E-16 7.9E-21 121.0 4.0 94 25-133 15-109 (110)
109 2aja_A Ankyrin repeat family p 99.6 1.9E-17 6.6E-22 154.5 -2.5 119 2-136 94-221 (376)
110 3ehr_A Osteoclast-stimulating 99.6 3.9E-16 1.3E-20 134.6 4.0 98 1-111 107-206 (222)
111 3aaa_C Myotrophin, protein V-1 99.6 1.5E-15 5.2E-20 118.5 6.4 95 30-139 3-98 (123)
112 3jue_A Arfgap with coiled-coil 99.6 1.2E-15 4.1E-20 141.8 6.1 108 1-121 236-347 (368)
113 2aja_A Ankyrin repeat family p 99.5 3.3E-16 1.1E-20 146.1 -1.7 112 2-136 130-247 (376)
114 3ui2_A Signal recognition part 99.5 2.4E-14 8.1E-19 125.6 8.4 105 1-136 78-182 (244)
115 4ev6_A Magnesium transport pro 61.0 41 0.0014 29.8 9.2 29 267-295 280-311 (339)
116 2iub_A CORA, divalent cation t 56.4 37 0.0013 30.4 8.1 28 267-295 304-335 (363)
117 2jwa_A Receptor tyrosine-prote 50.2 14 0.00047 22.3 2.7 30 296-325 12-41 (44)
118 2knc_A Integrin alpha-IIB; tra 40.1 21 0.00071 22.6 2.5 23 294-316 11-34 (54)
119 1gp8_A Protein (scaffolding pr 31.0 36 0.0012 19.7 2.3 17 4-20 17-33 (40)
120 2ks1_B Epidermal growth factor 27.9 50 0.0017 19.8 2.7 29 296-324 11-40 (44)
121 2l2t_A Receptor tyrosine-prote 27.3 68 0.0023 19.2 3.2 29 296-324 10-39 (44)
122 1zza_A Stannin, AG8_1; helix, 21.9 39 0.0013 22.5 1.5 28 301-328 20-49 (90)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.91 E-value=2.3e-24 Score=179.27 Aligned_cols=131 Identities=22% Similarity=0.189 Sum_probs=97.4
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
++|+.||+.|+.++|+.|+++|++++. +|.+|+||||+|+..++.++++.|+ ..+++++.+|.+|+||||+|+..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll----~~gad~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA-SDSDGRTPLHHAAENGHKEVVKLLI----SKGADVNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----hcccchhhhccCCCCHHHHHHHc
Confidence 367888888888888888888887754 6788888888888888888888777 46777888888888888888888
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKM 148 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~ 148 (335)
|+.++ ++| +..|++++.+|.+|+||||+|+..+.. ++++.|.+.+ .|.+|++....
T Consensus 81 g~~~~v~~L--------l~~gadvn~~d~~G~TpLh~A~~~g~~---~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 145 (169)
T 4gpm_A 81 GHKEVVKLL--------ISKGADVNAKDSDGRTPLHHAAENGHK---EVVKLLISKGADVNTSDSDGRTPLDLARE 145 (169)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHH--------HHCcCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 87777 777 677788888888888888888876643 6666666533 34456665443
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=2.7e-23 Score=172.79 Aligned_cols=123 Identities=23% Similarity=0.197 Sum_probs=113.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.+++++. +|.+|+||||+|+..|+.+++++|+ ..|+++|.+|.+|+||||+|+.
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll----~~gadvn~~d~~G~TpLh~A~~ 112 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLI----SKGADVNAKDSDGRTPLHHAAE 112 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHcCCHHHHHHHH----HCcCCCCCCCCCCCCHHHHHHH
Confidence 5999999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..|++++.+|.+|+||||+|+..+.. +++++|.++|+.
T Consensus 113 ~g~~~~v~~L--------l~~gad~~~~d~~G~TpL~~A~~~g~~---~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 113 NGHKEVVKLL--------ISKGADVNTSDSDGRTPLDLAREHGNE---EVVKLLEKQGGW 161 (169)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHTC---
T ss_pred cCCHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHHHHCCCC
Confidence 999999 888 889999999999999999999988754 889999988875
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=4.8e-23 Score=164.59 Aligned_cols=120 Identities=19% Similarity=0.058 Sum_probs=109.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|++.|+.++++.|++.+++++. +|..|+||||+|+.+|+.++++.|+ ..++++|.+|.+|+||||+|+.
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLL----KNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCHHHHHHH
Confidence 3899999999999999999999999865 7999999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
.|+.++ ++| +..+++++.+|.+|+||+|+|+..+.. +++++|.+.
T Consensus 90 ~~~~~~v~~L--------l~~g~~~~~~~~~g~tpl~~A~~~~~~---~~~~~Ll~~ 135 (136)
T 2jab_A 90 IGHLEIAEVL--------LKHGADVNAQDKFGKTAFDISIGNGNE---DLAEILQKL 135 (136)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHC
T ss_pred cCCHHHHHHH--------HHcCCCCcCcCCCCCCHHHHHHHCCCH---HHHHHHHHc
Confidence 999999 888 788999999999999999999988754 677776653
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=2.4e-23 Score=166.29 Aligned_cols=121 Identities=13% Similarity=-0.006 Sum_probs=110.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC-CCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK-GNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~-G~TpLH~Aa 79 (335)
+||||+|++.|+.+++++|++++++++. +|..|+||||+|+. |+.+++++|+ ..+++++.+|.. |+||||+|+
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~~A~ 86 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLL----LHGAEPNCADPATLTRPVHDAA 86 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHH----HHTCCSSCCBTTTTBCHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHH----HCCCCCCCcCCCCCCCHHHHHH
Confidence 5899999999999999999999998865 79999999999999 9999999999 578999999999 999999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
..|+.++ ++| +..+++++.+|..|+||+|+|+..+.. +++++|.++|+
T Consensus 87 ~~~~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~~~~---~~~~~Ll~~Ga 135 (136)
T 1d9s_A 87 REGFLDTLVVL--------HRAGARLDVCDAWGRLPVDLAEEQGHR---DIARYLHAATG 135 (136)
T ss_dssp HHTCHHHHHHH--------HHTCCCCCCCSSSSSCHHHHHHHHTCH---HHHHHHHHHHC
T ss_pred HcCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHcCC
Confidence 9999999 888 889999999999999999999987754 77777776554
No 5
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=4.1e-22 Score=155.87 Aligned_cols=122 Identities=25% Similarity=0.192 Sum_probs=111.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|++.|+.+++++|++.++++.. .|..|+||||+|+..++.+++++|+ ..+.+++.+|..|+||||+|+.
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHH----HcCCCCcccCCCCCcHHHHHHH
Confidence 5999999999999999999999998865 7999999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
.++.++ ++| ...+++++.+|.+|.||+++|+..+.. +++++|.+.|+
T Consensus 78 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLL--------LEAGADVNAKDKNGRTPLHLAARNGHL---EVVKLLLEAGA 125 (126)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHTC
T ss_pred cChHHHHHHH--------HHcCCCCcccCCCCCCHHHHHHHcCcH---HHHHHHHHcCC
Confidence 999998 888 788999999999999999999987743 78888877664
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=2.4e-22 Score=165.52 Aligned_cols=130 Identities=20% Similarity=0.121 Sum_probs=108.5
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.|++.|+.++++.|++.++......|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+..
T Consensus 10 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 10 RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL----QHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH----hcCCCCCccCCCCCCHHHHHHHc
Confidence 78999999999999999998766555557888999999999999999999999 46788999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVI 146 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~ 146 (335)
|+.++ ++| +..+++++.+|..|+||||+|+..+.. +++++|.+.+ .+.+|++..
T Consensus 86 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~t~l~~a 148 (165)
T 3twr_A 86 GHYEVAELL--------VKHGAVVNVADLWKFTPLHEAAAKGKY---EICKLLLQHGADPTKKNRDGNTPLDLV 148 (165)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCTGGGS
T ss_pred CcHHHHHHH--------HhCCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCcccCCCCCChhHhH
Confidence 99888 888 788999999999999999999987743 6777776643 345677654
No 7
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=3.4e-22 Score=162.69 Aligned_cols=119 Identities=20% Similarity=0.053 Sum_probs=107.6
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.|++.|+.++++.|++.+++.. .|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+..
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLL----RAGVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHH----TTTCCTTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHHc
Confidence 79999999999999999999998764 5889999999999999999999999 57889999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
|+.++ ++| +..|++++.+|..|+||+|+|+..+.. +++++|.+.+
T Consensus 78 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g 123 (153)
T 1awc_B 78 GHANIVEVL--------LKHGADVNAKDMLKMTALHWATEHNHQ---EVVELLIKYG 123 (153)
T ss_dssp TCHHHHHHH--------HTTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTT
T ss_pred ChHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcC
Confidence 99998 888 788999999999999999999987754 7788777754
No 8
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=6.9e-23 Score=163.68 Aligned_cols=119 Identities=21% Similarity=0.120 Sum_probs=106.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLL----QHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCGGGCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCcccCcCCCCCCHHHHHHH
Confidence 5999999999999999999999998865 7999999999999999999999999 5688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..|++++.+|.+|+||+|+|...+ ..++++++.+
T Consensus 86 ~~~~~~v~~L--------l~~ga~~~~~~~~g~tpl~~A~~~~---~~~~l~~l~~ 130 (137)
T 3c5r_A 86 NGHVDIVKLL--------LSYGASRNAVNIFGLRPVDYTDDES---MKSLLLLPEK 130 (137)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCGGGGCCCHH---HHHHHSCC--
T ss_pred cCCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHhhcc---HHHHHhhccc
Confidence 999999 888 7889999999999999999998543 4466665544
No 9
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=3.6e-22 Score=156.58 Aligned_cols=106 Identities=13% Similarity=0.009 Sum_probs=99.8
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..++++|.+|.+|+||||+|+.
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLL----LKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHH----TTTCCTTCCCTTSCCHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCHHHHHHH
Confidence 3799999999999999999999998855 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR 119 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~ 119 (335)
.|+.++ ++| +..+++++.+|.+|+||+|+|.
T Consensus 83 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 83 EGHVSCVKLL--------LSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHCC
T ss_pred cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHhC
Confidence 999999 888 7889999999999999999995
No 10
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.86 E-value=7.5e-22 Score=163.64 Aligned_cols=133 Identities=14% Similarity=0.006 Sum_probs=111.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
.||||.|+..|+.++++.|++.+++....+|..|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL----EWGADPHILAKERESALSLAST 78 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCchhhcccCCCHHHHHHH
Confidence 479999999999999999999998866668899999999999999999999999 4678899999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC--------CCCCcchhhh
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN--------GQYPDGVIKM 148 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~--------~~~p~~~~~~ 148 (335)
.|+.++ ++| +..+++++.+|..|+||||+|+..+.. +++++|.+.++ +.+|++....
T Consensus 79 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 144 (172)
T 3v30_A 79 GGYTDIVGLL--------LERDVDINIYDWNGGTPLLYAVRGNHV---KCVEALLARGADLTTEADSGYTPMDLAVA 144 (172)
T ss_dssp TTCHHHHHHH--------HTTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 999888 888 788999999999999999999987744 67777766433 4456665443
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.86 E-value=1.4e-21 Score=174.59 Aligned_cols=131 Identities=18% Similarity=0.078 Sum_probs=116.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+||..|+.+++++|++.++++.. .+.+|+||+|+|+..++.++++.|+ ..++++|.+|.+|+||||+|+.
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll----~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLL----DSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK 147 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~ 147 (335)
.|+.++ ++| +..|++++.+|..|.||||+|+..+.. +++++|.+.| .|.+|++...
T Consensus 162 ~g~~~~v~~L--------l~~gadvn~~~~~g~t~Lh~A~~~g~~---~~v~~Ll~~Gad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 162 GGHHELVALL--------LQHGASINASNNKGNTALHEAVIEKHV---FVVELLLLHGASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp TTCGGGHHHH--------HHTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred CCCHHHHHHH--------HHCCCCCCccccCCCcHHHHHHHcCCH---HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999999 888 889999999999999999999988754 7788887754 3456776553
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.86 E-value=1.3e-21 Score=161.94 Aligned_cols=120 Identities=21% Similarity=0.122 Sum_probs=109.0
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.||+.|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+..
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLL----KNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHHc
Confidence 689999999999999999999998865 7999999999999999999999999 46889999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
|+.++ ++| +..+++++.+|.+|.||||+|+..+.. +++++|.+.+
T Consensus 91 ~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g 136 (169)
T 2y1l_E 91 GHLEIVEVL--------LKNGADVNANDMEGHTPLHLAAMFGHL---EIVEVLLKNG 136 (169)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTT
T ss_pred CCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcC
Confidence 99998 888 888999999999999999999987754 7788777754
No 13
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=1.2e-21 Score=161.59 Aligned_cols=123 Identities=11% Similarity=-0.038 Sum_probs=111.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||.|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|..|+||||+|+.
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLL----QNGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHH----HcCCCCCCcCCCCCcHHHHHHH
Confidence 5899999999999999999999988755 7999999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..+++++.+|..|.||||+|+..+.. ++++.|.+.++.
T Consensus 79 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~ 127 (167)
T 3v31_A 79 KGYTDIVKML--------LDCGVDVNEYDWNGGTPLLYAVHGNHV---KCVKMLLESGAD 127 (167)
T ss_dssp HTCHHHHHHH--------HHHTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHCCCCCCcCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 999999 888 788999999999999999999988754 778877775543
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.86 E-value=1.3e-21 Score=162.23 Aligned_cols=120 Identities=12% Similarity=-0.055 Sum_probs=109.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 111 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGGYTDIVGLLL----ERDVDINIYDWNGGTPLLYAVR 111 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----TTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
.|+.++ ++| +..|++++.+|.+|+||+|+|+..+.. +++++|.+.
T Consensus 112 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~~~~~L~~~ 157 (172)
T 3v30_A 112 GNHVKCVEAL--------LARGADLTTEADSGYTPMDLAVALGYR---KVQQVIENH 157 (172)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHHH
T ss_pred cCCHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHhCcH---HHHHHHHHH
Confidence 999999 888 888999999999999999999988754 666666553
No 15
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.85 E-value=9.2e-22 Score=164.38 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=111.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
.+|||.|+..|+.++++.|++.++......|..|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI----MRGARINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence 478999999999999999999876655668999999999999999999999999 4688899999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKM 148 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~ 148 (335)
.|+.++ ++| +..+++++.+|..|.||||+|+..+.. ++++.|.+.+ .|.+|++....
T Consensus 82 ~~~~~~v~~L--------l~~g~~~~~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 82 HGHRDIVQKL--------LQYKADINAVNEHGNVPLHYACFWGQD---QVAEDLVANGALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCSSBCCTTSCCGGGGSCH
T ss_pred cCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHCCCCcchhccCCCCcHHHHHH
Confidence 999888 888 788999999999999999999987754 6777777643 34567765543
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.85 E-value=7.8e-22 Score=161.70 Aligned_cols=130 Identities=13% Similarity=0.002 Sum_probs=112.4
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.|+..|+.++++.|++.+++++. +|..|+||||+|+. |+.+++++|+ ..+.+++.+|..|+||||+|+..
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLL----LRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHHc
Confidence 799999999999999999999988855 79999999999999 9999999999 46889999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC---------CCCCcchhhh
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN---------GQYPDGVIKM 148 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~---------~~~p~~~~~~ 148 (335)
|+.++ ++| +..+++++.+|.+|+||||+|+..+.. +++++|.+.++ |.+|++....
T Consensus 81 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 81 GFLDTLQTL--------LEFQADVNIEDNEGNLPLHLAAKEGHL---RVVEFLVKHTASNVGHRNHKGDTACDLARL 146 (162)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHccCCCCCCcCCCCCcHHHHHHH
Confidence 99998 888 788999999999999999999987754 67777766433 4466665543
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=4e-22 Score=163.03 Aligned_cols=122 Identities=14% Similarity=-0.024 Sum_probs=110.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCc-hhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNT-PFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T-pLH~Aa 79 (335)
.||||+|++.|+.+++++|++++++++. +|..|+||||+|+ .|+.+++++|+ ..++++|.+|..|+| |||+|+
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll----~~g~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLL----LHGAEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHH----TTTCCCCCCCTTTCCCHHHHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHH----HcCCCCCCcCCCCCcHHHHHHH
Confidence 5899999999999999999999998865 7999999999985 89999999999 578999999999999 999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
..|+.++ ++| +..|++++.+|..|+||||+|+..+.. +++++|.+.|+.
T Consensus 87 ~~~~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~~~~---~~v~~Ll~~ga~ 136 (156)
T 1bi7_B 87 REGFLDTLVVL--------HRAGARLDVRDAWGRLPVDLAEELGHR---DVARYLRAAAGG 136 (156)
T ss_dssp HHTCHHHHHHH--------HHHTCCSSCCCTTCCCHHHHHHHHTCH---HHHHHHSSCC--
T ss_pred HCCCHHHHHHH--------HHcCCCCcccCCCCCCHHHHHHHhCHH---HHHHHHHHcCCC
Confidence 9999999 888 888999999999999999999987754 888888877665
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=9.7e-22 Score=166.02 Aligned_cols=123 Identities=15% Similarity=0.044 Sum_probs=111.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.++++.. .|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLL----SKGSNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCcHHHHHHH
Confidence 5999999999999999999999998855 7999999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..+++++.+|..|.||||+|+..+.. +++++|.+.++.
T Consensus 111 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~ 159 (192)
T 2rfm_A 111 FGYSEMSYFL--------LEHGANVNDRNLEGETPLIVASKYGRS---EIVKKLLELGAD 159 (192)
T ss_dssp HTCHHHHHHH--------HHTTCCSSCCCTTCCCHHHHHHHHTCH---HHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHCCCC
Confidence 999999 888 788999999999999999999987754 788888776544
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=2.6e-21 Score=157.46 Aligned_cols=117 Identities=16% Similarity=0.022 Sum_probs=107.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGHANIVEVLL----KHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----TTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELA 133 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l 133 (335)
.|+.++ ++| +..|++++.+|..|+||+|+|+..+.. +++++|
T Consensus 110 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~i~~~L 152 (153)
T 1awc_B 110 HNHQEVVELL--------IKYGADVHTQSKFCKTAFDISIDNGNE---DLAEIL 152 (153)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHH
T ss_pred cCCHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHh
Confidence 999999 888 888999999999999999999988754 555554
No 20
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=1.6e-21 Score=164.73 Aligned_cols=119 Identities=15% Similarity=0.067 Sum_probs=109.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 143 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLMWSIIFGYSEMSYFLL----EHGANVNDRNLEGETPLIVASK 143 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSSCCCTTCCCHHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..|++++.+|..|.||+|+|+..+.. +++++|.+
T Consensus 144 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~~v~~Ll~ 188 (192)
T 2rfm_A 144 YGRSEIVKKL--------LELGADISARDLTGLTAEASARIFGRQ---EVIKIFTE 188 (192)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHH
T ss_pred cCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHHhCcH---HHHHHHHh
Confidence 999999 888 788999999999999999999988754 66666654
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.85 E-value=2.8e-21 Score=159.37 Aligned_cols=119 Identities=14% Similarity=-0.005 Sum_probs=108.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 111 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIVKMLL----DCGVDVNEYDWNGGTPLLYAVH 111 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHH----HCCCCCCcCCCCCCCHHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 5788999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..|++++.+|.+|+||+|+|+..+.. ++++.|.+
T Consensus 112 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~L~~ 156 (167)
T 3v31_A 112 GNHVKCVKML--------LESGADPTIETDSGYNSMDLAVALGYR---SVQQVIES 156 (167)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHH
T ss_pred cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCcH---HHHHHHHH
Confidence 999999 888 788999999999999999999987754 55555544
No 22
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.84 E-value=4.2e-21 Score=160.35 Aligned_cols=123 Identities=20% Similarity=0.167 Sum_probs=113.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..++++|.+|.+|+||||+|+.
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~ 114 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASHGHRDIVQKLL----QYKADINAVNEHGNVPLHYACF 114 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHH
Confidence 5899999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..|++++.+|.+|+||+++|+..+ ..++++.|.+.++.
T Consensus 115 ~~~~~~v~~L--------l~~ga~~~~~~~~g~tpl~~A~~~~---~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 115 WGQDQVAEDL--------VANGALVSICNKYGEMPVDKAKAPL---RELLRERAEKMGQN 163 (179)
T ss_dssp TTCHHHHHHH--------HHTTCCSSBCCTTSCCGGGGSCHHH---HHHHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHCCCCcchhccCCCCcHHHHHHHH---HHHHHHHHHHhhcC
Confidence 999998 888 8889999999999999999998765 45888888887766
No 23
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=8.8e-22 Score=170.23 Aligned_cols=123 Identities=15% Similarity=0.033 Sum_probs=106.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcc-cccccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV-KNLIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~~~~n~~d~~G~TpLH~Aa 79 (335)
+||||+||..|+.++++.|++.+++++. +|..|+||||+|+.+|+.+++++|+ .. ++++|.+|.+|+||||+|+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLF----TQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHT----TSTTCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH----cCCCCCccccCCCCCCHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 44 8899999999999999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
..|+.++ ++| +..|++++.+|.+|+||+|+|+..+ ..++++.+.+.++.
T Consensus 149 ~~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~---~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 149 WKGYADIVQLL--------LAKGARTDLRNIEKKLAFDMATNAA---CASLLKKKQGTDAV 198 (222)
T ss_dssp HHTCHHHHHHH--------HHHTCCSCCCCTTSCCHHHHCCSHH---HHHHHC--------
T ss_pred HcCCHHHHHHH--------HHcCCCCccccCCCCCHHHHhcchh---HHHHHHHHhccchh
Confidence 9999999 888 8889999999999999999999654 55777777665544
No 24
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.84 E-value=6.1e-21 Score=157.05 Aligned_cols=121 Identities=20% Similarity=0.114 Sum_probs=109.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++++++++. +|.+|+||||+|+..|+.+++++|+ ..++++|.+|.+|+||||+|+.
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 117 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHNACSYGHYEVAELLV----KHGAVVNVADLWKFTPLHEAAA 117 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHHcCcHHHHHHHH----hCCCCCCCcCCCCCCHHHHHHH
Confidence 4999999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
.|+.++ ++| +..|++++.+|.+|+||+|+|.. +. .+++++|.++++
T Consensus 118 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~a~~-~~---~~i~~~L~~~gA 164 (165)
T 3twr_A 118 KGKYEICKLL--------LQHGADPTKKNRDGNTPLDLVKD-GD---TDIQDLLRGDAA 164 (165)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCTGGGSCT-TC---HHHHHHHHTC--
T ss_pred cCCHHHHHHH--------HHcCCCCcccCCCCCChhHhHhc-CC---hHHHHHHhhccc
Confidence 999999 888 88899999999999999999887 32 378888876553
No 25
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.84 E-value=4.5e-21 Score=156.21 Aligned_cols=131 Identities=16% Similarity=0.039 Sum_probs=108.0
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.|+..|+.++++.|++..+......|..|+||||+ +..|+.++++.|+ ..|.+++.+|.+|+||||+|+..
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL----KQGASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH----HCCCCCCCcCCCCCCHHHHHHHc
Confidence 799999999999999999988332334478899999999 9999999999999 46888999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH-------cCCCCCCcchhhh
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA-------DGNGQYPDGVIKM 148 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~-------~~~~~~p~~~~~~ 148 (335)
|+.++ ++| +..|++++.+|.+|+||||+|+..+.. +++++|.+ +..|.+|++....
T Consensus 79 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~~~~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 79 GFLDTLKVL--------VEHGADVNVPDGTGALPIHLAVQEGHT---AVVSFLAAESDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp TCHHHHHHH--------HHTTCCSCCCCTTSCCHHHHHHHHTCH---HHHHHHHTTSCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHH--------HHcCCCCCCcCCCCCcHHHHHHHhChH---HHHHHHHhccCCCCcCCCCCCHHHHHHH
Confidence 99988 888 788999999999999999999977753 66666654 2345567766543
No 26
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=2.5e-21 Score=158.64 Aligned_cols=122 Identities=23% Similarity=0.189 Sum_probs=109.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+. |+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..+.++|.+|.+|+||||+|+.
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 112 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGFLDTLQTLL----EFQADVNIEDNEGNLPLHLAAK 112 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence 589999999 999999999999998865 7999999999999999999999999 5788999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccc-cccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGY-YQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~-~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..+.+ ++.+|..|+||+|+|+..+.. +++++|.++|++
T Consensus 113 ~~~~~~v~~L--------l~~g~~~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~GAd 162 (162)
T 1ihb_A 113 EGHLRVVEFL--------VKHTASNVGHRNHKGDTACDLARLYGRN---EVVSLMQANGAG 162 (162)
T ss_dssp TTCHHHHHHH--------HHHSCCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTC--
T ss_pred cCCHHHHHHH--------HHccCCCCCCcCCCCCcHHHHHHHcCCH---HHHHHHHHhCCC
Confidence 999999 888 777877 699999999999999988754 888888887753
No 27
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=6.5e-21 Score=157.80 Aligned_cols=120 Identities=23% Similarity=0.160 Sum_probs=109.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|+++++++.. .|..|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFGHLEIVEVLL----KNGADVNANDMEGHTPLHLAAM 122 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999998855 7999999999999999999999999 5788999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
.|+.++ ++| +..|++++.+|..|.||+|+|+..+.. +++++|.+.
T Consensus 123 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~L~~~ 168 (169)
T 2y1l_E 123 FGHLEIVEVL--------LKNGADVNAQDKFGKTAFDISIDNGNE---DLAEILQKL 168 (169)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHTC
T ss_pred cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHhCCH---HHHHHHHHc
Confidence 999999 888 888999999999999999999988754 677777653
No 28
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=6.3e-21 Score=165.54 Aligned_cols=127 Identities=20% Similarity=0.147 Sum_probs=89.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCcc----ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCC-------
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECC----ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDV------- 69 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~----~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~------- 69 (335)
+||||+|+..|+.+++++|++.+++.. ...|.+|+||||+|+..|+.+++++|+ ..+++++.+|.
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALL----ARGASVSARATGSVFHYR 113 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCCSGGGSCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH----hCCCCCCcccCCcceeec
Confidence 467777777777777777777776642 224567777777777777777777777 34556665544
Q ss_pred ------CCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCc-hHHHHHHHHHHcCCC
Q 019816 70 ------KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPE-LEKEIKELAKADGNG 139 (335)
Q Consensus 70 ------~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~-~~~~i~~~l~~~~~~ 139 (335)
+|+||||+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. ...+++++|.+.++.
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~L--------l~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLL--------IEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 68888888888887777 777 677888888888888888888866653 234566777776553
No 29
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=3.7e-21 Score=162.41 Aligned_cols=111 Identities=11% Similarity=-0.090 Sum_probs=81.7
Q ss_pred CchHhHHHhcCCH----HHHHHHhhhCCCccccccCCCCchHHHHHhcCC------HhHHHHHHhcCCcccccccccCCC
Q 019816 1 MTALHLAAGQGND----WIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD------KSDLKHLLNEYPVVKNLIFEKDVK 70 (335)
Q Consensus 1 ~TpLH~Aa~~G~~----e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~------~~~v~~Ll~~~~~~~~~~n~~d~~ 70 (335)
+||||+|+..|+. +++++|+++|++++. +|.+|+||||+|+..++ .+++++|+ ..|+++|.+|.+
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll----~~Gadin~~d~~ 113 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPLFQGGGNDITGTTELCKIFL----EKGADITALYKP 113 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHH----HTTCCSSSCBGG
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCcchhhHHHHHHHHH----HCCCCCCccCCC
Confidence 4788888888764 478888888887755 67788888888887776 35677777 467788888888
Q ss_pred CC-chhHHHHhcCCCC-----c-ccccccCcccccc-cccccccccCCCCCHHHHHHhcCCc
Q 019816 71 GN-TPFHVLAAVCPDP-----R-PYNAGYGIIPYKI-AKGYYQAVNKQNISVEHINRYGFPE 124 (335)
Q Consensus 71 G~-TpLH~Aa~~g~~~-----~-~lL~~~~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~ 124 (335)
|+ ||||+|+..+... + ++| +. .|++++.+|+.|+||||+|++.+..
T Consensus 114 g~ttpLh~A~~~~~~~~~~~~iv~~L--------l~~~gad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 114 YKIVVFKNIFNYFVDENEMIPLYKLI--------FSQSGLQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp GTBCTTGGGGGCCSCHHHHHHHHHHH--------HTSTTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred cCchHHHHHHHcCCChhhHHHHHHHH--------HHhcCCCCcccCCCCCCHHHHHHHcCCH
Confidence 88 8888887754432 3 455 55 7888888888888888888876654
No 30
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=3.5e-21 Score=170.17 Aligned_cols=125 Identities=17% Similarity=0.091 Sum_probs=107.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCcccccc--------------CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVD--------------DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE 66 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~ 66 (335)
+||||+|+..|+.++++.|++++++++. +| ..|+||||+|+..|+.+++++|++. ...++++|.
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~ga~~~~ 171 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGADVHA-QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN-GHKQADLRR 171 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC-SSCCCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcCc-cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc-cccCCCCcc
Confidence 4899999999999999999999999866 55 6899999999999999999999921 017899999
Q ss_pred cCCCCCchhHHHHhcCCC---------Cc-ccccccCccccccccccc-------ccccCCCCCHHHHHHhcCCchHHHH
Q 019816 67 KDVKGNTPFHVLAAVCPD---------PR-PYNAGYGIIPYKIAKGYY-------QAVNKQNISVEHINRYGFPELEKEI 129 (335)
Q Consensus 67 ~d~~G~TpLH~Aa~~g~~---------~~-~lL~~~~~~~~~~~~~~~-------~~~n~~G~Tpl~~a~~~~~~~~~~i 129 (335)
+|.+|+||||+|+..++. ++ ++| +..|+++ +.+|.+|+||||+|+..+.. ++
T Consensus 172 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L--------l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~---~~ 240 (260)
T 3jxi_A 172 QDSRGNTVLHALVAIADNTRENTKFVTKMYDLL--------LIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI---GI 240 (260)
T ss_dssp CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH--------HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH---HH
T ss_pred cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH--------HHhCcccccccchhhcccCCCCCHHHHHHHcCCH---HH
Confidence 999999999999998873 45 677 7888888 78999999999999988854 77
Q ss_pred HHHHHHcCC
Q 019816 130 KELAKADGN 138 (335)
Q Consensus 130 ~~~l~~~~~ 138 (335)
++.|.+++.
T Consensus 241 v~~Ll~~g~ 249 (260)
T 3jxi_A 241 FQHIIRREI 249 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhCC
Confidence 777776543
No 31
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.83 E-value=4.1e-21 Score=169.45 Aligned_cols=125 Identities=17% Similarity=0.040 Sum_probs=107.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCC-------------CCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDR-------------GWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK 67 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~-------------G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~ 67 (335)
+||||+|+..|+.++++.|++++++++. +|.. |+||||+|+..|+.+++++|++. ...|+++|.+
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-~~~ga~~n~~ 168 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN-PHQPASLEAT 168 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC-SSCCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc-cccCCCcCcc
Confidence 5999999999999999999999999865 5665 99999999999999999999921 1178999999
Q ss_pred CCCCCchhHHHHh--cCCCC-------c-ccccccCccccccccccc-------ccccCCCCCHHHHHHhcCCchHHHHH
Q 019816 68 DVKGNTPFHVLAA--VCPDP-------R-PYNAGYGIIPYKIAKGYY-------QAVNKQNISVEHINRYGFPELEKEIK 130 (335)
Q Consensus 68 d~~G~TpLH~Aa~--~g~~~-------~-~lL~~~~~~~~~~~~~~~-------~~~n~~G~Tpl~~a~~~~~~~~~~i~ 130 (335)
|.+|+||||+|+. .++.+ + ++| +..|+++ +.+|.+|+||||+|+..+.. +++
T Consensus 169 d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L--------l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~---~~v 237 (256)
T 2etb_A 169 DSLGNTVLHALVMIADNSPENSALVIHMYDGL--------LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKI---EIF 237 (256)
T ss_dssp CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH--------HHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH---HHH
T ss_pred CCCCCCHHHHHHHcccCCchhhHHHHHHHHHH--------HHcCCCcccccccccccCCCCCCHHHHHHHhCCH---HHH
Confidence 9999999999999 56665 7 777 8889999 99999999999999988754 777
Q ss_pred HHHHHcCC
Q 019816 131 ELAKADGN 138 (335)
Q Consensus 131 ~~l~~~~~ 138 (335)
++|.+++.
T Consensus 238 ~~Ll~~g~ 245 (256)
T 2etb_A 238 RHILQREF 245 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHhCCC
Confidence 77766443
No 32
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=1.6e-20 Score=161.87 Aligned_cols=122 Identities=16% Similarity=0.003 Sum_probs=104.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++......|..|+||||+|+..|+.++++.|+ ..+.+++.+|.+|+||||+|+.
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 134 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI----NSHADVNAVDDLGKSALHWAAA 134 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHH----HcCCCCcCcCCCCCcHHHHHHH
Confidence 589999999999999999999888544557889999999999999999999999 4678899999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
.|+.++ ++| +..+++++.+|..|.||+|+|+..+.. +++++|.+.+
T Consensus 135 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g 181 (223)
T 2f8y_A 135 VNNVDAAVVL--------LKNGANKDMQNNREETPLFLAAREGSY---ETAKVLLDHF 181 (223)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHHHTCH---HHHHHHHHTT
T ss_pred cCCHHHHHHH--------HHcCCCCCCcCCCCcCHHHHHHHcCCH---HHHHHHHHcC
Confidence 999888 777 778899999999999999999977744 6777777644
No 33
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=4e-21 Score=171.61 Aligned_cols=120 Identities=19% Similarity=0.110 Sum_probs=106.3
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||+|+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..|+++|.+|.+|+||||+|+.
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~TpL~~A~~~g~~~~v~~Ll----~~gadvn~~~~~g~t~Lh~A~~ 194 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGNTPLIYACSGGHHELVALLL----QHGASINASNNKGNTALHEAVI 194 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCGGGHHHHH----HTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCccccccccChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHH----HCCCCCCccccCCCcHHHHHHH
Confidence 5899999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..|+|++.+|++|+||||+|++++ + ..++++.+..
T Consensus 195 ~g~~~~v~~L--------l~~Gad~~~~d~~G~TpL~~A~~~~-~-i~~lL~~l~~ 240 (269)
T 4b93_B 195 EKHVFVVELL--------LLHGASVQVLNKRQRTAVDCAEQNS-K-IMELLQVVPS 240 (269)
T ss_dssp TTCHHHHHHH--------HHTTCCSCCCCTTSCCSGGGSCTTC-H-HHHHTTC---
T ss_pred cCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHhCC-c-HHHHHHHHHH
Confidence 999999 888 8899999999999999999998765 2 2344444443
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=7.5e-21 Score=169.48 Aligned_cols=126 Identities=18% Similarity=0.117 Sum_probs=109.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccC--------------CCCchHHHHHhcCCHhHHHHHHhcCCcccccccc
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDD--------------RGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE 66 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~--------------~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~ 66 (335)
+||||+|+..|+.+++++|++++++++. +|. .|+||||+|+..|+.+++++|++. ...|+++|.
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~gad~~~ 179 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN-SWQPADISA 179 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC-SSCCCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc-ccCCCCcee
Confidence 5999999999999999999999999866 565 799999999999999999999921 016899999
Q ss_pred cCCCCCchhHHHHhcCC---------CCc-ccccccCcccccccccccc-------cccCCCCCHHHHHHhcCCchHHHH
Q 019816 67 KDVKGNTPFHVLAAVCP---------DPR-PYNAGYGIIPYKIAKGYYQ-------AVNKQNISVEHINRYGFPELEKEI 129 (335)
Q Consensus 67 ~d~~G~TpLH~Aa~~g~---------~~~-~lL~~~~~~~~~~~~~~~~-------~~n~~G~Tpl~~a~~~~~~~~~~i 129 (335)
+|.+|+||||+|+..|+ .++ ++| +..|++++ .+|.+|+||||+|+..+.. ++
T Consensus 180 ~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~L--------l~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~---~i 248 (273)
T 2pnn_A 180 RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI--------LILGAKLHPTLKLEEITNRKGLTPLALAASSGKI---GV 248 (273)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH--------HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH---HH
T ss_pred eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHH--------HHhhhhcccccccccccCCCCCCHHHHHHHhChH---HH
Confidence 99999999999999988 345 667 78888886 5999999999999988854 88
Q ss_pred HHHHHHcCCC
Q 019816 130 KELAKADGNG 139 (335)
Q Consensus 130 ~~~l~~~~~~ 139 (335)
+++|.+.|+.
T Consensus 249 v~~Ll~~ga~ 258 (273)
T 2pnn_A 249 LAYILQREIH 258 (273)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHCCCC
Confidence 8888887764
No 35
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.82 E-value=1.1e-20 Score=153.90 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=105.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+ |..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..|.+++.+|.+|+||||+|+.
T Consensus 37 ~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 110 (156)
T 1bd8_A 37 KTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTGFLDTLKVLV----EHGADVNVPDGTGALPIHLAVQ 110 (156)
T ss_dssp CCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHH
T ss_pred CcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH----HcCCCCCCcCCCCCcHHHHHHH
Confidence 599999 999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +.. ++++.+|.+|.||+|+|+..+.. ++++.|.+
T Consensus 111 ~~~~~~v~~L--------l~~-~~~~~~~~~g~t~l~~A~~~~~~---~~v~~Ll~ 154 (156)
T 1bd8_A 111 EGHTAVVSFL--------AAE-SDLHRRDARGLTPLELALQRGAQ---DLVDILQG 154 (156)
T ss_dssp HTCHHHHHHH--------HTT-SCTTCCCTTSCCHHHHHHHSCCH---HHHHHHHT
T ss_pred hChHHHHHHH--------Hhc-cCCCCcCCCCCCHHHHHHHcCcH---HHHHHHHh
Confidence 999998 777 666 89999999999999999988754 66666543
No 36
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=1.3e-20 Score=166.30 Aligned_cols=132 Identities=17% Similarity=0.112 Sum_probs=105.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccc-cccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKN-LIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~n~~d~~G~TpLH~Aa 79 (335)
+||||+|+..|+.++++.|++++++++. +|..|+||||+|+..|+.+++++|++ .+. +++.+|.+|+||||+|+
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIR----NRATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH----STTSCTTCCCTTCCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCccccCCCCCcHHHHHH
Confidence 5899999999999999999999988855 78899999999999999999999983 333 78888888888888888
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKM 148 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~ 148 (335)
..|+.++ ++| +..+++++.+|.+|+||||+|+..+.. ++++.|.+.| .|.+|++....
T Consensus 133 ~~~~~~~v~~L--------l~~g~~~~~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 133 RLAVEGMLEDL--------INSHADVNAVDDLGKSALHWAAAVNNV---DAAVVLLKNGANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHTCSSHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHHTCH---HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HcChHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 8888888 777 677888888888888888888876643 6666666633 34566665543
No 37
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=2.9e-20 Score=160.66 Aligned_cols=120 Identities=16% Similarity=0.039 Sum_probs=81.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhC--CCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc--ccccccCCCCCchhH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRC--PECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK--NLIFEKDVKGNTPFH 76 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~--~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~n~~d~~G~TpLH 76 (335)
+||||+|+..|+.++++.|++.+ ++.....|..|+||||+|+..|+.++++.|+ ..+ .+++.+|.+|+||||
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~~~g~t~L~ 112 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY----DRPLKPDLNKITNQGVTCLH 112 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH----SSSSCCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH----hCCCCcccccCCcCCCCHHH
Confidence 47777777777777777777777 4444435667777777777777777777777 333 566677777777777
Q ss_pred HHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
+|+..|+.++ ++| +..|++++.+|..|+||||+|+..+.. ++++.|.+
T Consensus 113 ~A~~~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~ 161 (228)
T 2dzn_A 113 LAVGKKWFEVSQFL--------IENGASVRIKDKFNQIPLHRAASVGSL---KLIELLCG 161 (228)
T ss_dssp HHHHTTCHHHHHHH--------HHTTCCSCCCCTTSCCHHHHHHHTTCH---HHHHHHHT
T ss_pred HHHHcCCHhHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHHHh
Confidence 7777777666 666 566677777777777777777765533 55555554
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=2.8e-20 Score=157.73 Aligned_cols=108 Identities=11% Similarity=-0.069 Sum_probs=50.2
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||+|++.|+.+++++|+++++++.. +|..|+||||+|+..|+.++++.|++. .+.+++.+|..|+||||+|+..
T Consensus 41 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 41 TPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAGAQGRTEILAYMLKH---ATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHH---SCCCTTCCCTTSCCSHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhc---cCcccccccCCCCcHHHHHHHc
Confidence 444444444444444444444444432 344444444444444444444444421 2334444444444555555444
Q ss_pred CCCCc-ccccccCcccccccc-cccccccCCCCCHHHHHHhc
Q 019816 82 CPDPR-PYNAGYGIIPYKIAK-GYYQAVNKQNISVEHINRYG 121 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~-~~~~~~n~~G~Tpl~~a~~~ 121 (335)
|+.++ ++| +..+ .+++.+|..|+||||+|+..
T Consensus 117 ~~~~~v~~L--------l~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 117 GHIDNVKLL--------LEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp TCHHHHHHH--------HHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred CCHHHHHHH--------HHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 44444 333 3333 44455555555555555533
No 39
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=3.4e-20 Score=163.49 Aligned_cols=124 Identities=15% Similarity=0.003 Sum_probs=110.8
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++.....+|..|+||||+|+..|+.++++.|+ ..+.++|.+|.+|+||||+|+.
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~ 166 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI----NSHADVNAVDDLGKSALHWAAA 166 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHH----HTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence 589999999999999999999988444558999999999999999999999999 5788999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..|++++.+|..|+||||+|+..+.. +++++|.+.|+.
T Consensus 167 ~~~~~~v~~L--------l~~ga~~~~~~~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~ 215 (253)
T 1yyh_A 167 VNNVDAAVVL--------LKNGANKDMQNNREETPLFLAAREGSY---ETAKVLLDHFAN 215 (253)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHCCCH---HHHHHHHHcCCC
Confidence 999998 888 888999999999999999999987754 788888886544
No 40
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=9.3e-21 Score=159.08 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=99.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~Aa 79 (335)
+||||+|++.|+.++++.|++ +.+++. +|..|+||||+|+..|+.+++++|+ ..++++|.+| .+|+||||+|+
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll----~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLA----EAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCCHHHHHH
Confidence 389999999999999999999 777755 7999999999999999999999999 5789999998 88999999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhc
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG 121 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~ 121 (335)
..|+.++ ++| +..|++++.+|.+|+||+|+|++.
T Consensus 119 ~~~~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 119 GYVRPEVVEAL--------VELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HTTCHHHHHHH--------HHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred hcCcHHHHHHH--------HHcCCCCcCCCCCCCCHHHHHHHh
Confidence 9999999 888 888999999999999999999854
No 41
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.82 E-value=3.1e-20 Score=166.25 Aligned_cols=120 Identities=14% Similarity=0.069 Sum_probs=90.0
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHH-----hcCCHhHHHHHHhcCCcccccccccCCCCCchh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAM-----VSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPF 75 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL 75 (335)
+||||+|+..|+.++++.|++.++......|..|+||||+|+ ..++.++++.|+ ..+...+..|..|+|||
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll----~~g~~~~~~~~~g~tpL 187 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLF----RLGNINAKASQAGQTAL 187 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH----HHSCTTCCCTTTCCCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH----HcCCCccccCCCCCCHH
Confidence 599999999999999999999998333447777888888777 456667777777 45666677777777777
Q ss_pred HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
|+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. ++++.|.+
T Consensus 188 h~A~~~g~~~~v~~L--------l~~gad~n~~d~~G~TpLh~A~~~g~~---~iv~~Ll~ 237 (276)
T 4hbd_A 188 MLAVSHGRVDVVKAL--------LACEADVNVQDDDGSTALMCACEHGHK---EIAGLLLA 237 (276)
T ss_dssp HHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHT
T ss_pred HHHHHcCCHHHHHHH--------HhCCCCCCCCCCCCCCHHHHHHHCCCH---HHHHHHHh
Confidence 77777777777 666 667777777777777777777766643 55665554
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=2.8e-20 Score=161.38 Aligned_cols=122 Identities=16% Similarity=0.037 Sum_probs=105.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccc-----cccCCCCCch
Q 019816 1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLI-----FEKDVKGNTP 74 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~-----n~~d~~G~Tp 74 (335)
+||||+|++.|+.++++.|++. +.+++. +|.+|+||||+|+..|+.++++.|++ .+.++ +.+|.+|+||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQ-RGAMGETALHIAALYDNLEAAMVLME----AAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHH----HCGGGGGCCCCSTTTTTCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHH----cCchhccccccccCCCCcCH
Confidence 5999999999999999999998 767654 79999999999999999999999993 45544 7788899999
Q ss_pred hHHHHhcCCCCc-ccccccCcccccccccccccccC-------------CCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 75 FHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNK-------------QNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 75 LH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-------------~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
||+|+..|+.++ ++| +..+++++.++. +|.||||+|+..+.. +++++|.+.|+
T Consensus 79 L~~A~~~~~~~~v~~L--------l~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga 145 (232)
T 2rfa_A 79 LHIAVINQNVNLVRAL--------LARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE---EIVRLLIEHGA 145 (232)
T ss_dssp HHHHHHTTCHHHHHHH--------HHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH---HHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHH--------HhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCH---HHHHHHHHCCC
Confidence 999999999999 888 778888888765 799999999988754 78887777554
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=1.4e-20 Score=163.95 Aligned_cols=135 Identities=16% Similarity=0.055 Sum_probs=96.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCc--ccccccccCCCCCchhHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPV--VKNLIFEKDVKGNTPFHVL 78 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~--~~~~~n~~d~~G~TpLH~A 78 (335)
+||||+|+..|+.+++++|+++++++.. +|..|+||||+|+..|+.++++.|++.... ....++.+|..|+||||+|
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A 124 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA 124 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH
Confidence 4788888888888888888888877754 677888888888888888888888732110 1234677777788888888
Q ss_pred HhcCCCCc-ccccccCcccccccccccccccC-CCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816 79 AAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK 147 (335)
Q Consensus 79 a~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~ 147 (335)
+..|+.++ ++| +..|++++.+|. .|.||||+|+..+.. +++++|.+.| .|.+|++...
T Consensus 125 ~~~~~~~~v~~L--------l~~g~~~~~~~~~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 192 (236)
T 1ikn_D 125 SIHGYLGIVELL--------VSLGADVNAQEPCNGRTALHLAVDLQNP---DLVSLLLKCGADVNRVTYQGYSPYQLTW 192 (236)
T ss_dssp HHTTCHHHHHHH--------HHHTCCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHTTTCCSCCCCTTCCCGGGGCT
T ss_pred HHcCCHHHHHHH--------HHcCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCcccCCCCCHHHHHH
Confidence 88887777 777 677778887776 788888888876643 6666666643 2345665544
No 44
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=163.93 Aligned_cols=121 Identities=16% Similarity=0.049 Sum_probs=109.2
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..|+++|.+|.+|+||||+|+..
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll----~~ga~~n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLI----TAGANVNSPDSHGWTPLHCAASC 97 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHHc
Confidence 789999999999999999999998865 7999999999999999999999999 56899999999999999999999
Q ss_pred CCCCc-ccccccCccccccccccccccc-CCCCCHHHHH--HhcCCchHHHHHHHHHHcCC
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVN-KQNISVEHIN--RYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n-~~G~Tpl~~a--~~~~~~~~~~i~~~l~~~~~ 138 (335)
|+.++ ++| +..|++++.++ .+|+||||+| +..+ ..+++++|.+.|+
T Consensus 98 g~~~~v~~L--------l~~ga~~~~~~~~~g~tpL~~A~a~~~~---~~~~v~~Ll~~ga 147 (229)
T 2vge_A 98 NDTVICMAL--------VQHGAAIFATTLSDGATAFEKCDPYREG---YADCATYLADVEQ 147 (229)
T ss_dssp TCHHHHHHH--------HTTTCCTTCCCSSTTCCTGGGCCTTSTT---HHHHHHHHHHHHH
T ss_pred CCHHHHHHH--------HHcCCCcccccCCCCCCHHHHHHHHhcC---hHHHHHHHHHcCC
Confidence 99999 888 88999999986 6999999999 6555 4578887777543
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=5.9e-20 Score=165.39 Aligned_cols=130 Identities=21% Similarity=0.080 Sum_probs=99.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc-------------
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK------------- 67 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~------------- 67 (335)
+||||+||..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|++ .+++++.+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~ 148 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCGYLDIAEYLIS----QGAHVGAVNSEGDTPLDIAEE 148 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCCS
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHh
Confidence 4788888888888888888888887755 68888888888888888888888883 33444333
Q ss_pred -----------------------------------------------CCCCCchhHHHHhcCCCCc-ccccccCcccccc
Q 019816 68 -----------------------------------------------DVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI 99 (335)
Q Consensus 68 -----------------------------------------------d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~ 99 (335)
|..|.||||+|+..|+.++ ++| +.
T Consensus 149 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L--------l~ 220 (299)
T 1s70_B 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL--------IQ 220 (299)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH--------HT
T ss_pred cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH--------HH
Confidence 3456777788888888777 777 77
Q ss_pred cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC--------CCCCcchh
Q 019816 100 AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN--------GQYPDGVI 146 (335)
Q Consensus 100 ~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~--------~~~p~~~~ 146 (335)
.|++++.+|.+|.||||+|+..+.. +++++|.+.|+ |.+|++..
T Consensus 221 ~g~d~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 221 ARYDVNIKDYDGWTPLHAAAHWGKE---EACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred cCCCCCCcCCCCCcHHHHHHhcCCH---HHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 8899999999999999999988754 77777777543 45566544
No 46
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=2.3e-20 Score=166.23 Aligned_cols=124 Identities=19% Similarity=0.100 Sum_probs=108.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCc----------------------------------------------cccccCCC
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPEC----------------------------------------------CELVDDRG 34 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~----------------------------------------------~~~~d~~G 34 (335)
+||||+|+..|+.+++++|++++++. ...+|..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 58899999999999999998877551 23468899
Q ss_pred CchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC-CCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCC
Q 019816 35 WNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK-GNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI 112 (335)
Q Consensus 35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~-G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~ 112 (335)
+||||+|+..|+.+++++|+ ..|++++.+|.. |+||||+|+..|+.++ ++| +..|++++.+|..|+
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L--------l~~gad~~~~d~~g~ 226 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLR----DAGADLNKPEPTCGRTPLHLAVEAQAASVLELL--------LKAGADPTARMYGGR 226 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSC
T ss_pred cCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHH--------HHcCCCCcccccCCC
Confidence 99999999999999999999 578999999865 9999999999999999 888 888999999999999
Q ss_pred CHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 113 SVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 113 Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
||||+|+..+.. +++++|.+.|+.
T Consensus 227 tpL~~A~~~~~~---~~v~~Ll~~ga~ 250 (282)
T 1oy3_D 227 TPLGSALLRPNP---ILARLLRAHGAP 250 (282)
T ss_dssp CHHHHHHTSSCH---HHHHHHHHTTCC
T ss_pred CHHHHHHHcCCc---HHHHHHHHcCCC
Confidence 999999988754 888888886654
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=3.5e-20 Score=157.14 Aligned_cols=121 Identities=13% Similarity=-0.034 Sum_probs=106.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc-ccccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK-NLIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-~~~n~~d~~G~TpLH~Aa 79 (335)
+||||+|+..|+.++++.|++.++......|..|+||||+|+..|+.+++++|+ ..+ .+++.+|.+|+||||+|+
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL----EDGREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH----HHCCCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCcCCCCCCCCCHHHHHH
Confidence 589999999999999999996665444558999999999999999999999999 455 889999999999999999
Q ss_pred hcCC-----CCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 80 AVCP-----DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 80 ~~g~-----~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
..++ .++ ++| +..|++++.+|.+|+||+|+|+..+.. +++++|.+.
T Consensus 149 ~~~~~~~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~ 200 (201)
T 3hra_A 149 GLREGNQLYQDIVKLL--------MENGADQSIKDNSGRTAMDYANQKGYT---EISKILAQY 200 (201)
T ss_dssp HSSCCSHHHHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHTC
T ss_pred HhccchhhHHHHHHHH--------HHCCCCCCccCCCCCCHHHHHHHcCCH---hHHHHHHhc
Confidence 9988 556 788 888999999999999999999988754 777777654
No 48
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=2.8e-20 Score=166.90 Aligned_cols=129 Identities=16% Similarity=0.060 Sum_probs=115.8
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccc-----cccCCCCchHHHHHhc---CCHhHHHHHHhcCCcccccccccCCCCCc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCE-----LVDDRGWNVLHFAMVS---FDKSDLKHLLNEYPVVKNLIFEKDVKGNT 73 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~-----~~d~~G~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T 73 (335)
++||.|+..|+.+.++.+++.+++.+. ..|..|+||||+|+.. |+.+++++|+ ..|+++|.+|.+|+|
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll----~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV----QNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH----HHCSCTTCCCTTCCC
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHH----HCCCCccccCCCCCC
Confidence 479999999999999999999998643 2488999999999999 8999999999 578999999999999
Q ss_pred hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCCCCCcch
Q 019816 74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGV 145 (335)
Q Consensus 74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~p~~~ 145 (335)
|||+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. ++++.|.+.+++.++.+.
T Consensus 208 pLh~A~~~g~~~~v~~L--------l~~gad~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~~~~~~~ 269 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLL--------LRGKASIEIANESGETPLDIAKRLKHE---HCEELLTQALSGRFNSHV 269 (278)
T ss_dssp HHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHTTCCCSSC
T ss_pred HHHHHHHcCCHHHHHHH--------HHcCCCCCCccCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCCcce
Confidence 9999999999999 888 889999999999999999999988754 888888888887666653
No 49
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=4.6e-20 Score=159.37 Aligned_cols=135 Identities=19% Similarity=0.114 Sum_probs=115.0
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc--ccccc-cCCCCCchhHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK--NLIFE-KDVKGNTPFHV 77 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~n~-~d~~G~TpLH~ 77 (335)
+||||+|++.|+.++++.|++.+++.....|.+|+||||+|+..|+.++++.|++ .+ .+++. +|..|+||||+
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLS----KMENVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TCTTCCGGGCCCTTSCCHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHh----ccccccccccCCCCCCCHHHH
Confidence 5999999999999999999999999877789999999999999999999999993 44 56666 88999999999
Q ss_pred HHhcCCCCc-ccccccCcccccccc--cccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816 78 LAAVCPDPR-PYNAGYGIIPYKIAK--GYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVI 146 (335)
Q Consensus 78 Aa~~g~~~~-~lL~~~~~~~~~~~~--~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~ 146 (335)
|+..|+.++ ++| +..+ .+++.+|.+|.||||+|+..+.. +++++|.+.+ .|.+|++..
T Consensus 79 A~~~~~~~~~~~L--------l~~g~~~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 79 ACSVGNLEVVKSL--------YDRPLKPDLNKITNQGVTCLHLAVGKKWF---EVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHCCHHHHHHH--------HSSSSCCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHH--------HhCCCCcccccCCcCCCCHHHHHHHcCCH---hHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 999999998 777 6766 89999999999999999987754 6777777643 345677765
Q ss_pred hhhh
Q 019816 147 KMNK 150 (335)
Q Consensus 147 ~~~~ 150 (335)
....
T Consensus 148 ~~~~ 151 (228)
T 2dzn_A 148 ASVG 151 (228)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 5433
No 50
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=3.8e-20 Score=164.79 Aligned_cols=142 Identities=18% Similarity=0.124 Sum_probs=104.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCc--cccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPEC--CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL 78 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~--~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A 78 (335)
+||||+||+.|+.+++++|++.+++. ...+|..|+||||+|+..|+.++++.|+ ..|++++.+|.+|+||||+|
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY----AAGAGVLVAERGGHTALHLA 85 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSSCCCTTSCCHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHH
Confidence 58999999999999999999887762 3447888999999999999999999988 46888888899999999999
Q ss_pred HhcCCCCc-ccccccCcc---------------------------------------cccccccccccccCCCCCHHHHH
Q 019816 79 AAVCPDPR-PYNAGYGII---------------------------------------PYKIAKGYYQAVNKQNISVEHIN 118 (335)
Q Consensus 79 a~~g~~~~-~lL~~~~~~---------------------------------------~~~~~~~~~~~~n~~G~Tpl~~a 118 (335)
+..|+.++ ++|...+.. .....+.+++.+|..|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 98888777 444211100 01223566888888888888888
Q ss_pred HhcCCchHHHHHHHHHHcC---------CCCCCcchhhhh
Q 019816 119 RYGFPELEKEIKELAKADG---------NGQYPDGVIKMN 149 (335)
Q Consensus 119 ~~~~~~~~~~i~~~l~~~~---------~~~~p~~~~~~~ 149 (335)
+..+.. ++++.|.+.+ .|.+|++.....
T Consensus 166 ~~~g~~---~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 202 (282)
T 1oy3_D 166 VIHKDA---EMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202 (282)
T ss_dssp HHTTCH---HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHcCCH---HHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc
Confidence 877643 6666665532 255677765443
No 51
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.81 E-value=2.3e-20 Score=164.12 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=98.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~Aa 79 (335)
+||||+||+.|+.++++.|++ +.+++. +|..|+||||+|+.+|+.+++++|+ ..++++|.+| .+|+||||+|+
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLA----EAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHH----HTTCCTTCCCSSSCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHH----HcCCCCCcCCCCCCCCHHHHHH
Confidence 489999999999999999999 877755 7999999999999999999999999 5789999998 88999999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHh
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRY 120 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~ 120 (335)
..|+.++ ++| +..|++++.+|.+|+||+|+|+.
T Consensus 120 ~~g~~~~v~~L--------l~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 120 GYVRPEVVEAL--------VELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HTTCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HcCCHHHHHHH--------HHCCCCCCCCCCCCCcHHHHHHH
Confidence 9999999 888 88899999999999999999984
No 52
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.81 E-value=6.2e-20 Score=158.12 Aligned_cols=134 Identities=17% Similarity=0.109 Sum_probs=115.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|++.|+.+++++|+++++++.. .|..|+||||+|+..|+.++++.|++. ...+++.+|.+|.||||+|+.
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRN---RATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHB---TTSCTTCCCTTCCCHHHHHHH
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCcHHHHHHH
Confidence 5899999999999999999999998865 799999999999999999999999932 223889999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhhh
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKMN 149 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~~ 149 (335)
.++.++ ++| +..+++++.+|..|.||||+|+..+.. +++++|.+.+ .+.+|++.....
T Consensus 102 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 102 LAVEGMLEDL--------INSHADVNAVDDLGKSALHWAAAVNNV---DAAVVLLKNGANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred hCcHHHHHHH--------HHcCCCCcCcCCCCCcHHHHHHHcCCH---HHHHHHHHcCCCCCCcCCCCcCHHHHHHHc
Confidence 999998 888 788999999999999999999987753 6777776643 345677665443
No 53
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.81 E-value=5e-20 Score=159.58 Aligned_cols=121 Identities=19% Similarity=0.114 Sum_probs=93.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
.||||.|++.|+.+.++.+++.++.....+|.+|+||||+|+..|+.+++++|+ ..+.+++.+|..|+||||+|+.
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL----QLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH----HhCCCCCCcCCCCCCHHHHHHH
Confidence 368888888888888888888877766667788888888888888888888888 4567788888888888888888
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
.|+.++ ++| +..+.+++.+|..|.||||+|+..+.. +++++|.+.
T Consensus 83 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~~ 128 (231)
T 3aji_A 83 AGXDEIVKAL--------LVKGAHVNAVNQNGCTPLHYAASKNRH---EIAVMLLEG 128 (231)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHT
T ss_pred cCHHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHc
Confidence 888777 777 677788888888888888888876643 566666553
No 54
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.81 E-value=3.8e-20 Score=161.19 Aligned_cols=123 Identities=18% Similarity=0.100 Sum_probs=73.4
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCc-----cccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCC-CCCchh
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPEC-----CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDV-KGNTPF 75 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~-~G~TpL 75 (335)
||||+|+..|+.++++.|++.+++. ....|..|+||||+|+..|+.+++++|+ ..|++++.+|. +|+|||
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV----SLGADVNAQEPCNGRTAL 155 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTTCCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCCHH
Confidence 5666666666666666666655431 2334555666666666666666666666 45666666665 666666
Q ss_pred HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
|+|+..|+.++ ++| +..|++++.+|..|+||+|+|+..+.. +++++|.+.|+.
T Consensus 156 ~~A~~~~~~~~v~~L--------l~~ga~~~~~~~~g~tpl~~A~~~~~~---~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLL--------LKCGADVNRVTYQGYSPYQLTWGRPST---RIQQQLGQLTLE 209 (236)
T ss_dssp HHHHHTTCHHHHHHH--------HTTTCCSCCCCTTCCCGGGGCTTSSCH---HHHHHHHTTSCG
T ss_pred HHHHHcCCHHHHHHH--------HHcCCCCCcccCCCCCHHHHHHccCch---HHHHHHHHcchh
Confidence 66666666665 555 555666666666666666666655432 555555555543
No 55
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.81 E-value=1.2e-20 Score=165.28 Aligned_cols=104 Identities=19% Similarity=0.134 Sum_probs=83.4
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..++++|.+|.+|+||||+|+..
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLV----QFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHHc
Confidence 678888888888888888888877654 6788888888888888888888888 46778888888888888888888
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCC-CHHHHH
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI-SVEHIN 118 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~-Tpl~~a 118 (335)
|+.++ ++| +..|++++.+|..|. ||+|+|
T Consensus 114 ~~~~~v~~L--------l~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 114 NNVQVCKFL--------VESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCSSSCCCHHHHC
T ss_pred CCHHHHHHH--------HHcCCCcceecCCCCcchHHHH
Confidence 88777 777 777888888887766 888887
No 56
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.81 E-value=7.6e-20 Score=158.44 Aligned_cols=131 Identities=22% Similarity=0.177 Sum_probs=98.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 115 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAASAGXDEIVKALL----VKGAHVNAVNQNGCTPLHYAAS 115 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHHHHcCHHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence 4788888888888888888888877754 6788888888888888888888888 4567788888888888888888
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK 147 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~ 147 (335)
.++.++ ++| ...+.+++.+|..|.||+|+|+..+.. +++++|.+.+ .|.+|++...
T Consensus 116 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 116 KNRHEIAVML--------LEGGANPDAKDHYDATAMHRAAAKGNL---KMVHILLFYKASTNIQDTEGNTPLHLAC 180 (231)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred cCCHHHHHHH--------HHcCCCCCCcCCCCCcHHHHHHHcCCH---HHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence 888777 777 667777788888888888888766543 5666655532 3445666544
No 57
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=5.4e-20 Score=170.69 Aligned_cols=122 Identities=12% Similarity=-0.016 Sum_probs=110.7
Q ss_pred CchHhHHHhcC--CHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccc-----ccccCCCCCc
Q 019816 1 MTALHLAAGQG--NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL-----IFEKDVKGNT 73 (335)
Q Consensus 1 ~TpLH~Aa~~G--~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~n~~d~~G~T 73 (335)
+||||+|+..| +.+++++|++.+.+++. +|..|+||||+|+..|+.+++++|+ ..+++ +|.+|.+|+|
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMM----DTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HHCSCSSSCCTTCCCTTCCC
T ss_pred CCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHH----hcccccccccccccCCCCCc
Confidence 58999999999 99999999999999865 7999999999999999999999999 35555 9999999999
Q ss_pred hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
|||+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. +++++|.+.++
T Consensus 214 ~L~~A~~~g~~~~v~~L--------l~~gad~~~~d~~g~tpL~~A~~~g~~---~~v~~Ll~~~~ 268 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRF--------VEMGIDVNMEDNEHTVPLYLSVRAAMV---LLTKELLQKTD 268 (364)
T ss_dssp TTHHHHTTTCHHHHHHH--------HTTTCCTTCCCTTSCCHHHHHHHTCCH---HHHHHHHHHSC
T ss_pred HHHHHHHcCCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHhChH---HHHHHHHHcCC
Confidence 9999999999999 888 889999999999999999999988754 77777777543
No 58
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=9.6e-20 Score=158.43 Aligned_cols=119 Identities=18% Similarity=0.003 Sum_probs=74.0
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc-ccccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK-NLIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-~~~n~~d~~G~TpLH~Aa 79 (335)
+||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+ ..+ .+++.+|..|.||||+|+
T Consensus 45 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~~~~~~~~~~~~g~t~L~~A~ 119 (237)
T 3b7b_A 45 RTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTCLHLAAKKGHYEVVQYLL----SNGQMDVNCQDDGGWTPMIWAT 119 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCHHHHHHHTTCHHHHHHHH----TTTCCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHH----hCCCCCcccCCCCCCCHHHHHH
Confidence 3667777777777777777766666543 5666677777777777766666666 233 455666666666666666
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
..++.++ ++| +..|.+++.+|..|.||+|+|+..+.. +++++|.+
T Consensus 120 ~~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~ 165 (237)
T 3b7b_A 120 EYKHVDLVKLL--------LSKGSDINIRDNEENICLHWAAFSGCV---DIAEILLA 165 (237)
T ss_dssp HTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHCCH---HHHHHHHT
T ss_pred HcCCHHHHHHH--------HHCCCCCCccCCCCCCHHHHHHHCCCH---HHHHHHHH
Confidence 6666665 555 555666666666666666666655432 45555544
No 59
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.80 E-value=6.6e-20 Score=166.35 Aligned_cols=131 Identities=18% Similarity=0.081 Sum_probs=113.5
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCcccc-----ccCCCCchHHHHHhc---CCHhHHHHHHhcCCcccccccccCCCCCc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCEL-----VDDRGWNVLHFAMVS---FDKSDLKHLLNEYPVVKNLIFEKDVKGNT 73 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~-----~d~~G~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T 73 (335)
++||.|+..|+.+.++.|++.+++++.. .|..|+||||+|+.. ++.+++++|+ ..|+++|.+|.+|+|
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll----~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII----QNGGHLDAKAADGNT 228 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH----HHSSCTTCCCTTCCC
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH----hcCCCCCCCCCCCCC
Confidence 4699999999999999999999998653 588999999999997 8999999999 578999999999999
Q ss_pred hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--CCCCCcchhh
Q 019816 74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--NGQYPDGVIK 147 (335)
Q Consensus 74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--~~~~p~~~~~ 147 (335)
|||+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. +++++|.+.+ .+.+|++...
T Consensus 229 pLh~A~~~g~~~~v~~L--------l~~gad~~~~d~~G~TpL~~A~~~~~~---~iv~~Ll~~ga~~g~tpLh~A~ 294 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLL--------LKGRALVGTVNEAGETALDIARKKHHK---ECEELLEQAQAGTFAFPLHVDY 294 (301)
T ss_dssp HHHHHHHTTCHHHHHHH--------HHTTCCCSCCCTTSCCHHHHHHHHTCH---HHHHHHHHHHHHTTSSCCC---
T ss_pred HHHHHHHcCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHhcCCCCCChhHHHH
Confidence 9999999999999 888 889999999999999999999987754 6777666633 4667887654
No 60
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=4.6e-20 Score=164.35 Aligned_cols=123 Identities=12% Similarity=-0.022 Sum_probs=104.2
Q ss_pred CchHhHHHhc---CCHHHHHHHhhhCCCcc----------ccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816 1 MTALHLAAGQ---GNDWIVQEIIQRCPECC----------ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK 67 (335)
Q Consensus 1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~----------~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~ 67 (335)
+||||+|+.. |+.+++++|++.+++.. ...|..|+||||+|+..|+.+++++|+ ..|++++.+
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll----~~ga~~~~~ 130 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV----ENGADVQAA 130 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH----HTTCCTTCC
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHH----HCCCCcCcc
Confidence 5999999986 99999999999875421 114678999999999999999999999 468899999
Q ss_pred CC--------------CCCchhHHHHhcCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHhcCCch----
Q 019816 68 DV--------------KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRYGFPEL---- 125 (335)
Q Consensus 68 d~--------------~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~~~~~~---- 125 (335)
|. +|+||||+|+..|+.++ ++| +. .|++++.+|.+|+||||+|+..+...
T Consensus 131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L--------l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~ 202 (273)
T 2pnn_A 131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL--------LQNSWQPADISARDSVGNTVLHALVEVADNTVDNT 202 (273)
T ss_dssp BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH--------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHH--------HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHH
Confidence 87 79999999999999999 888 77 89999999999999999999765421
Q ss_pred --HHHHHHHHHH
Q 019816 126 --EKEIKELAKA 135 (335)
Q Consensus 126 --~~~i~~~l~~ 135 (335)
..++++.|.+
T Consensus 203 ~~~~~~v~~Ll~ 214 (273)
T 2pnn_A 203 KFVTSMYNEILI 214 (273)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 1456666655
No 61
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.80 E-value=6e-20 Score=168.42 Aligned_cols=124 Identities=16% Similarity=0.080 Sum_probs=101.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC---HhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD---KSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV 77 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~ 77 (335)
+||||+||..|+.+++++|++++++++. +|.+|+||||+|+.+|+ .++++.|++. ...+++.+|.+|+||||+
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~---~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLDY---LYPCLILEDSMNRTILHH 207 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSHHHHTTCHHHHHHH---HGGGGGEECTTCCCHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhcccccHHHHHHHHHh---hhccccCCCCCCCCHHHH
Confidence 5999999999999999999999999965 89999999999999998 6777777732 226799999999999999
Q ss_pred HHh----cCCCCc-ccccccCcccccccc--------------------c-------------------------ccccc
Q 019816 78 LAA----VCPDPR-PYNAGYGIIPYKIAK--------------------G-------------------------YYQAV 107 (335)
Q Consensus 78 Aa~----~g~~~~-~lL~~~~~~~~~~~~--------------------~-------------------------~~~~~ 107 (335)
|+. .|+.++ ++| +..+ + +++.+
T Consensus 208 A~~~~~~~g~~~~v~~L--------l~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~ 279 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYY--------LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQ 279 (327)
T ss_dssp HHHHHTSTTCHHHHHHH--------HHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCC
T ss_pred HHHHccccccHHHHHHH--------HHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCC
Confidence 998 677776 554 2211 1 57888
Q ss_pred cCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 108 NKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 108 n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
|.+|+||||+|+..+.. ++++.|.+.|+.
T Consensus 280 d~~G~TpLh~A~~~g~~---~~v~~Ll~~Gad 308 (327)
T 1sw6_A 280 DSNGDTCLNIAARLGNI---SIVDALLDYGAD 308 (327)
T ss_dssp CTTSCCHHHHHHHHCCH---HHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 99999999999988754 788888876654
No 62
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=1.3e-19 Score=157.68 Aligned_cols=135 Identities=25% Similarity=0.148 Sum_probs=116.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++......|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLL----SKGSDINIRDNEENICLHWAAF 153 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCccCCCCCCHHHHHHH
Confidence 589999999999999999999985444558999999999999999999999999 5788999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhhhh
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKMNK 150 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~~~ 150 (335)
.|+.++ ++| +..+++++.+|..|.||+|+|+..+.. ++++.|.+.+ .|.+|++......
T Consensus 154 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 154 SGCVDIAEIL--------LAAKCDLHAVNIHGDSPLHIAARENRY---DCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp HCCHHHHHHH--------HTTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred CCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHhCCH---hHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 999998 888 888999999999999999999988754 7778777644 3456766554433
No 63
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=2.1e-19 Score=156.40 Aligned_cols=123 Identities=18% Similarity=0.065 Sum_probs=80.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.++++.|++.....+.+++.+|.+|+||||+|+.
T Consensus 47 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~ 125 (241)
T 1k1a_A 47 QTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 125 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHH
Confidence 4777777777777777777777777644 577777777777777777777777743222223566666667777777766
Q ss_pred cCCCCc-ccccccCccccccccccccccc-CCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVN-KQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n-~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..+.+++.++ ..|.||||+|+..+.. +++++|.+
T Consensus 126 ~~~~~~~~~L--------l~~g~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~ 171 (241)
T 1k1a_A 126 TECQETVQLL--------LERGADIDAVDIKSGRSPLIHAVENNSL---SMVQLLLQ 171 (241)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHH
T ss_pred cCCHHHHHHH--------HHcCCCcccccccCCCcHHHHHHHcCCH---HHHHHHHH
Confidence 666666 555 55566666666 5666666666655532 45555544
No 64
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.79 E-value=1.9e-19 Score=159.50 Aligned_cols=120 Identities=17% Similarity=-0.015 Sum_probs=105.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+||..|+.++++.|++.+++++. +|.+|+||||+|+..|+.++++.|+ ..|+++|.+|.+|+||||+|+.
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILL----KHGAQVNGVTADWHTPLFNACV 78 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence 5999999999999999999999998865 7999999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
.|+.++ ++| ++.+++++. +.+|.||+|+|+..+.. ++++.|.+.+
T Consensus 79 ~~~~~~v~~L--------l~~g~~~~~-~~~g~t~L~~A~~~~~~---~~v~~Ll~~g 124 (261)
T 2xai_A 79 SGSWDCVNLL--------LQHGASVQP-ESDLASPIHEAARRGHV---ECVNSLIAYG 124 (261)
T ss_dssp HTCHHHHHHH--------HHTTCCSSC-SCTTCCHHHHHHHTTCH---HHHHHHHHTT
T ss_pred cCCHHHHHHH--------HHCCCCCCC-CCCCCCHHHHHHHcCcH---HHHHHHHHcC
Confidence 999998 888 777888875 44599999999987754 6777777644
No 65
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=3.1e-20 Score=163.77 Aligned_cols=124 Identities=15% Similarity=0.018 Sum_probs=104.7
Q ss_pred CchHhHHHhc---CCHHHHHHHhhhCCCcccc----------ccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816 1 MTALHLAAGQ---GNDWIVQEIIQRCPECCEL----------VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK 67 (335)
Q Consensus 1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~----------~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~ 67 (335)
+||||+|+.. |+.+++++|++.+++.... .|..|+||||+|+..|+.+++++|+ ..|+++|.+
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~ 119 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLV----ENGADVHLR 119 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH----HTTCCTTCC
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcc
Confidence 5899999999 9999999999998765421 3478999999999999999999999 568899999
Q ss_pred CCC-------------CCchhHHHHhcCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHh--cCCch---
Q 019816 68 DVK-------------GNTPFHVLAAVCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRY--GFPEL--- 125 (335)
Q Consensus 68 d~~-------------G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~--~~~~~--- 125 (335)
|.. |+||||+|+..|+.++ ++| +. .|++++.+|.+|+||||+|+. .+...
T Consensus 120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L--------l~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL--------LENPHQPASLEATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH--------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHH--------HhccccCCCcCccCCCCCCHHHHHHHcccCCchhhH
Confidence 886 9999999999999999 888 77 899999999999999999997 33321
Q ss_pred -HHHHHHHHHHc
Q 019816 126 -EKEIKELAKAD 136 (335)
Q Consensus 126 -~~~i~~~l~~~ 136 (335)
..+++++|.+.
T Consensus 192 ~~~~iv~~Ll~~ 203 (256)
T 2etb_A 192 LVIHMYDGLLQM 203 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 11266666653
No 66
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=3.5e-20 Score=161.35 Aligned_cols=133 Identities=17% Similarity=0.058 Sum_probs=115.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCC----CccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCP----ECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPF 75 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~----~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpL 75 (335)
+||||+|+..|+.++++.|++.++ +. ...|..|+||||+|+..|+.++++.|+ ..+.+++.+| ..|+|||
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~~g~t~L 154 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLL----ERGADIDAVDIKSGRSPL 154 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTTCCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHH----HcCCCcccccccCCCcHH
Confidence 589999999999999999999987 55 447899999999999999999999999 5688999998 8899999
Q ss_pred HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816 76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVI 146 (335)
Q Consensus 76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~ 146 (335)
|+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. +++++|.+.| .|.+|++..
T Consensus 155 ~~A~~~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpl~~A 223 (241)
T 1k1a_A 155 IHAVENNSLSMVQLL--------LQHGANVNAQMYSGSSALHSASGRGLL---PLVRTLVRSGADSSLKNCHNDTPLMVA 223 (241)
T ss_dssp HHHHHTTCHHHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHHTCH---HHHHHHHHTTCCTTCCCTTSCCTTTTC
T ss_pred HHHHHcCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHhcCCCCCCcCCCCCCHHHHH
Confidence 99999999999 888 888999999999999999999987754 7778777744 355777765
Q ss_pred hhh
Q 019816 147 KMN 149 (335)
Q Consensus 147 ~~~ 149 (335)
...
T Consensus 224 ~~~ 226 (241)
T 1k1a_A 224 RSR 226 (241)
T ss_dssp SSH
T ss_pred Hhc
Confidence 543
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.79 E-value=4.3e-20 Score=163.11 Aligned_cols=124 Identities=15% Similarity=0.079 Sum_probs=103.9
Q ss_pred CchHhHHH---hcCCHHHHHHHhhhCCCc----------cccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816 1 MTALHLAA---GQGNDWIVQEIIQRCPEC----------CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK 67 (335)
Q Consensus 1 ~TpLH~Aa---~~G~~e~v~~Ll~~~~~~----------~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~ 67 (335)
+||||+|+ +.|+.++++.|++.+++. ....|..|+||||+|+..|+.+++++|+ ..|+++|.+
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~ 122 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLV----EKGADVHAQ 122 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHH----HTTCCTTCC
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHH----hCCCCcCcc
Confidence 59999999 789999999999987542 1224558999999999999999999999 578899999
Q ss_pred C--------------CCCCchhHHHHhcCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHhcCCch----
Q 019816 68 D--------------VKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRYGFPEL---- 125 (335)
Q Consensus 68 d--------------~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~~~~~~---- 125 (335)
| .+|+||||+|+..|+.++ ++| +. .|++++.+|.+|+||||+|+..+...
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L--------l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~ 194 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL--------TENGHKQADLRRQDSRGNTVLHALVAIADNTRENT 194 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH--------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH--------HhccccCCCCcccCCCCCcHHHHHHHhccCchhHH
Confidence 8 689999999999999999 888 77 89999999999999999999655421
Q ss_pred --HHHHHHHHHHc
Q 019816 126 --EKEIKELAKAD 136 (335)
Q Consensus 126 --~~~i~~~l~~~ 136 (335)
..++++.|.+.
T Consensus 195 ~~~~~~v~~Ll~~ 207 (260)
T 3jxi_A 195 KFVTKMYDLLLIK 207 (260)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 13566666553
No 68
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.79 E-value=1.2e-19 Score=163.15 Aligned_cols=121 Identities=16% Similarity=-0.103 Sum_probs=109.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.+++++.. +|+||||+|+..|+.+++++|+ ..|+++|.+|..|+||||+|+.
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILL----FSGLDDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCcCCCCCcHHHHHHH
Confidence 58999999999999999999999887553 5999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCC-CCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN-ISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G-~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..|++++.+|..| .||||+|+..+.. +++++|.+.++.
T Consensus 105 ~g~~~~v~~L--------l~~ga~~~~~~~~g~~t~L~~A~~~~~~---~~v~~Ll~~g~~ 154 (285)
T 3kea_A 105 SGNMQTVKLF--------VKKNWRLMFYGKTGWKTSFYHAVMLNDV---SIVSYFLSEIPS 154 (285)
T ss_dssp TTCHHHHHHH--------HHHCGGGGGCSSSGGGSHHHHHHHTTCH---HHHHHHHTTSCT
T ss_pred cCCHHHHHHH--------HhcCCCCCccCCCCCCCHHHHHHHcCCH---HHHHHHHhCCCc
Confidence 999999 888 88899999999999 8999999988754 788888876543
No 69
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.79 E-value=2.4e-19 Score=158.83 Aligned_cols=118 Identities=14% Similarity=-0.062 Sum_probs=86.3
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++++++++. +|.+|+||||+|+..|+.++++.|+ ..+++++. +.+|+||||+|+.
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~-~~~g~t~L~~A~~ 110 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLL----QHGASVQP-ESDLASPIHEAAR 110 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSSC-SCTTCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCC-CCCCCCHHHHHHH
Confidence 4788888888888888888888877754 6788888888888888888888888 34555553 4457777777777
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..|++++.+|.+|.||||+|+..+.. ++++.|.+
T Consensus 111 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~ 155 (261)
T 2xai_A 111 RGHVECVNSL--------IAYGGNIDHKISHLGTPLYLACENQQR---ACVKKLLE 155 (261)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCBTTTBCHHHHHHHTTCH---HHHHHHHH
T ss_pred cCcHHHHHHH--------HHcCCCCCcCCCCCCCHHHHHHHhCCH---HHHHHHHH
Confidence 777777 666 666777777777777777777766543 55555555
No 70
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=1.3e-19 Score=134.72 Aligned_cols=84 Identities=27% Similarity=0.254 Sum_probs=79.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..|++++.+|.+|+||||+|+.
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHH
Confidence 6999999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccc
Q 019816 81 VCPDPR-PYN 89 (335)
Q Consensus 81 ~g~~~~-~lL 89 (335)
.|+.++ ++|
T Consensus 78 ~~~~~~~~~L 87 (93)
T 1n0q_A 78 NGHLEVVKLL 87 (93)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 999988 777
No 71
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=1.3e-19 Score=139.97 Aligned_cols=102 Identities=20% Similarity=0.125 Sum_probs=93.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..++.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLL----AKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHT----TTTCCTTCCCTTCCCTTHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence 5899999999999999999999998855 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVE 115 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl 115 (335)
.++.++ ++| +..|++++.++..|.||-
T Consensus 85 ~~~~~~~~~L--------l~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLL--------DAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHH--------HTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHH--------HHcCCCCCcCCccccccc
Confidence 999998 888 889999999999999884
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=1.2e-19 Score=158.90 Aligned_cols=122 Identities=8% Similarity=-0.084 Sum_probs=83.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
.||||.|++.|+.+.++.|++++.++.. +..|.||||+|+..|+.++++.|+ ..++++|.+|.+|+||||+|+.
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRII----YEVDDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHT----STTSSCCCCCTTSCCHHHHHHH
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence 5899999999999999999999998854 578999999999999999999999 5788999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..|++++.+|.+|+||||+|+..+.. ++++.|.+.++.
T Consensus 80 ~g~~~~v~~L--------l~~ga~~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~ 128 (239)
T 1ycs_B 80 AGHTEIVKFL--------VQFGVNVNAADSDGWTPLHCAASCNNV---QVCKFLVESGAA 128 (239)
T ss_dssp HTCHHHHHHH--------HHHTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 999999 888 888999999999999999999988754 788888876644
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=5e-19 Score=157.29 Aligned_cols=124 Identities=14% Similarity=0.028 Sum_probs=113.1
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||.|++.|+.++++.|++.+++++...|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL----RHGADPVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence 379999999999999999999999987756889999999999999999999999 5688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..+.+++.+|..|.||||+|+..+.. +++++|.+.+..
T Consensus 82 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~~g~~ 130 (285)
T 1wdy_A 82 AGSVKLLKLF--------LSKGADVNECDFYGFTAFMEAAVYGKV---KALKFLYKRGAN 130 (285)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCBCTTCCBHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHcCCCCCccCcccCCHHHHHHHhCCH---HHHHHHHHhCCC
Confidence 999999 888 788999999999999999999988754 788888876654
No 74
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=6.6e-19 Score=167.23 Aligned_cols=121 Identities=20% Similarity=0.134 Sum_probs=77.6
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||+|+..|+.+++++|++++++.+. .|..|+||||+|+..|+.++++.|+ ..+.++|.+|..|+||||+|+..
T Consensus 247 t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 321 (437)
T 1n11_A 247 TPLHLAAQEGHAEMVALLLSKQANGNL-GNKSGLTPLHLVAQEGHVPVADVLI----KHGVMVDATTRMGYTPLHVASHY 321 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCSSCCCHHHHHHHS
T ss_pred CHHHHHHHCCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----hCCccCCCCCCCCCCHHHHHHHc
Confidence 566666666666666666666665533 4666666666666666666666666 34566666666777777777777
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
|+.++ ++| +..|++++.+|..|+||||+|+..+.. +++++|.++|+
T Consensus 322 g~~~~v~~L--------l~~gad~n~~~~~g~t~L~~A~~~g~~---~iv~~Ll~~ga 368 (437)
T 1n11_A 322 GNIKLVKFL--------LQHQADVNAKTKLGYSPLHQAAQQGHT---DIVTLLLKNGA 368 (437)
T ss_dssp SCSHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred CcHHHHHHH--------HhcCCCCCCCCCCCCCHHHHHHHCChH---HHHHHHHHCcC
Confidence 66666 666 566677777777777777777766533 56666666443
No 75
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=7e-19 Score=158.07 Aligned_cols=120 Identities=17% Similarity=-0.021 Sum_probs=104.3
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+||..|+.++++.|++.+++++. +|.+|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILL----KHGAQVNGVTADWHTPLFNACV 134 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCE-ECTTCCCHHHHHHHTTCHHHHHHHH----HTTCCSSCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHCCcHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
.|+.++ ++| +..+.+++..+ +|.||||+|+..+.. ++++.|.+.+
T Consensus 135 ~~~~~~v~~L--------l~~g~~~~~~~-~g~t~L~~A~~~g~~---~~v~~Ll~~g 180 (285)
T 3d9h_A 135 SGSWDCVNLL--------LQHGASVQPES-DLASPIHEAARRGHV---ECVNSLIAYG 180 (285)
T ss_dssp HTCHHHHHHH--------HHTTCCSSCSC-TTSCHHHHHHHHTCH---HHHHHHHHTT
T ss_pred cCHHHHHHHH--------HHCCCCCCCCC-CCCCHHHHHHHcCCH---HHHHHHHHCC
Confidence 999998 887 77777777544 489999999977744 6777776644
No 76
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.77 E-value=1.2e-18 Score=159.62 Aligned_cols=95 Identities=26% Similarity=0.126 Sum_probs=75.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll----~~g~~~~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHA-KDKGGLVPLHNACSYGHYEVTELLL----KHGACVNAMDLWQFTPLHEAAS 133 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence 4788888888888888888888888755 6888888888888888888888888 4677888888888888888888
Q ss_pred cCCCCc-ccccccCccccccccccccccc
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVN 108 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n 108 (335)
.|+.++ ++| +..|++++..|
T Consensus 134 ~~~~~~v~~L--------l~~g~~~~~~~ 154 (351)
T 3utm_A 134 KNRVEVCSLL--------LSHGADPTLVN 154 (351)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCC
T ss_pred cCCHHHHHHH--------HHcCCCCcccc
Confidence 888887 666 55566555444
No 77
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=5.1e-19 Score=171.36 Aligned_cols=128 Identities=18% Similarity=0.121 Sum_probs=110.9
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCcccc-----ccCCCCchHHHHHh---cCCHhHHHHHHhcCCcccccccccCCCCCc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCEL-----VDDRGWNVLHFAMV---SFDKSDLKHLLNEYPVVKNLIFEKDVKGNT 73 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~-----~d~~G~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T 73 (335)
+.||.|+..|+.+.++.|++.+++++.. .|..|+||||+||. .|+.+++++|+ ..|+++|.+|.+|+|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll----~~ga~vn~~d~~g~T 209 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII----QNGGHLDAKAADGNT 209 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH----HHSCCTTCCCSSSCC
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHH----HcCCCCCccCCCCCc
Confidence 3699999999999999999999988642 28899999999966 89999999999 578999999999999
Q ss_pred hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC--CCCcc
Q 019816 74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG--QYPDG 144 (335)
Q Consensus 74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~--~~p~~ 144 (335)
|||+|+..|+.++ ++| +..|++++.+|.+|+||||+|+..+.. ++++.|.++|+. .+|+|
T Consensus 210 pLh~A~~~g~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~~~~---~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLL--------LKGRALVGTVNEAGETALDIARKKHHK---ECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp HHHHHTTTTCHHHHHHH--------HHTCCCCSCCCTTCCCHHHHHHHTTCH---HHHHHHHHTCC--------
T ss_pred HHHHHHHcCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHhCCCCCCCcce
Confidence 9999999999999 888 889999999999999999999988754 888888887765 24554
No 78
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=4.6e-19 Score=164.95 Aligned_cols=120 Identities=13% Similarity=0.010 Sum_probs=108.9
Q ss_pred chHhHHHhc-CCHHHHHHHhhhCCCcccccc--CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816 2 TALHLAAGQ-GNDWIVQEIIQRCPECCELVD--DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL 78 (335)
Q Consensus 2 TpLH~Aa~~-G~~e~v~~Ll~~~~~~~~~~d--~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A 78 (335)
||||.|+.. |+.++++.|++.+++++. .| ..|+||||+|+..|+.+++++|+ ..++++|.+|.+|+||||+|
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL----~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLL----QNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHH
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHH
Confidence 689999999 999999999999999866 56 89999999999999999999999 57899999999999999999
Q ss_pred HhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 79 AAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 79 a~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
+..|+.++ ++| +..|++++.+|.+|.||||+|+..+.. +++++|...+
T Consensus 276 ~~~g~~~~v~~L--------L~~Gad~~~~d~~G~TpL~~A~~~g~~---~iv~lLl~~~ 324 (368)
T 3jue_A 276 TILGHTGLACLF--------LKRGADLGARDSEGRDPLTIAMETANA---DIVTLLRLAK 324 (368)
T ss_dssp HHHTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHH
T ss_pred HHcCcHHHHHHH--------HHCcCCCCCcCCCCCCHHHHHHHCCCH---HHHHHHHHcC
Confidence 99999999 888 888999999999999999999988754 6666666543
No 79
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=6.6e-19 Score=167.22 Aligned_cols=119 Identities=18% Similarity=0.110 Sum_probs=108.8
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|++.|+.++++.|++++.+++. +|..|+||||+|+.+|+.+++++|+ ..|+++|.+|..|+||||+|+.
T Consensus 279 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 279 LTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLL----QHQADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCccCCC-CCCCCCCHHHHHHHcCcHHHHHHHH----hcCCCCCCCCCCCCCHHHHHHH
Confidence 5899999999999999999999998865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.|+.++ ++| +..|++++.+|.+|+||+++|.+.+.. ++.++|+.
T Consensus 354 ~g~~~iv~~L--------l~~ga~~~~~~~~g~t~l~~A~~~g~~---~~~~~l~~ 398 (437)
T 1n11_A 354 QGHTDIVTLL--------LKNGASPNEVSSDGTTPLAIAKRLGYI---SVTDVLKV 398 (437)
T ss_dssp TTCHHHHHHH--------HHTTCCSCCCCSSSCCHHHHHHHTTCH---HHHHHHHH
T ss_pred CChHHHHHHH--------HHCcCCCCCCCCCCCCHHHHHHHcCcH---HHHHHHHh
Confidence 999999 888 889999999999999999999988865 45555544
No 80
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=1.1e-18 Score=155.11 Aligned_cols=123 Identities=18% Similarity=0.086 Sum_probs=110.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCC----HhHHHHHHhcCCcccccccccCCCCCchh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFD----KSDLKHLLNEYPVVKNLIFEKDVKGNTPF 75 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL 75 (335)
+||||+|+..|+.+++++|++. +.++.. .|..|+||||+|+..++ .+++++|+ ..|.++|.+|.+|+|||
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll----~~g~~~~~~~~~g~t~L 223 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLL----DHGADVNVRGERGKTPL 223 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHHHHCSCTTTHHHHHHHHH----HTTCCSSCCCTTSCCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHHccccchHHHHHHHHH----HcCCCCCCcCCCCCcHH
Confidence 4899999999999999999998 776644 79999999999999999 88999998 57899999999999999
Q ss_pred HHHHhcCCCCc-ccccccCcccccc-cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 76 HVLAAVCPDPR-PYNAGYGIIPYKI-AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 76 H~Aa~~g~~~~-~lL~~~~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
|+|+..|+.++ ++| +. .+++++.+|.+|+||+|+|+..+.. +++++|.+.|+.
T Consensus 224 ~~A~~~~~~~~v~~L--------l~~~g~~~~~~~~~g~t~l~~A~~~~~~---~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 224 ILAVEKKHLGLVQRL--------LEQEHIEINDTDSDGKTALLLAVELKLK---KIAELLCKRGAS 278 (285)
T ss_dssp HHHHHTTCHHHHHHH--------HHSSSCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHSSC
T ss_pred HHHHHcCCHHHHHHH--------HhccCCCccccCCCCCcHHHHHHHcCcH---HHHHHHHHcCCC
Confidence 99999999998 776 55 8999999999999999999988754 889999888876
No 81
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=156.51 Aligned_cols=122 Identities=14% Similarity=-0.045 Sum_probs=107.7
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|.+|+||||+|+..|+.+++++|+ ..+.+++.. .+|+||||+|+.
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~-~~g~t~L~~A~~ 166 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLL----QHGASVQPE-SDLASPIHEAAR 166 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCSSCS-CTTSCHHHHHHH
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCHHHHHHHHH----HCCCCCCCC-CCCCCHHHHHHH
Confidence 5999999999999999999999998865 7999999999999999999999999 456677654 459999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.|+.++ ++| +..+++++.+|.+|.||||+|+..+.. +++++|.+.++.
T Consensus 167 ~g~~~~v~~L--------l~~g~~~~~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~ 215 (285)
T 3d9h_A 167 RGHVECVNSL--------IAYGGNIDHKISHLGTPLYLACENQQR---ACVKKLLESGAD 215 (285)
T ss_dssp HTCHHHHHHH--------HHTTCCTTCCBTTTBCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred cCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHHcCcH---HHHHHHHHCCCC
Confidence 999999 888 788999999999999999999988754 788888776554
No 82
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.76 E-value=8.1e-19 Score=163.75 Aligned_cols=124 Identities=17% Similarity=0.121 Sum_probs=109.8
Q ss_pred CchHhHHHhcC---CHHHHHHHhhhCCCccc-------cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC
Q 019816 1 MTALHLAAGQG---NDWIVQEIIQRCPECCE-------LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK 70 (335)
Q Consensus 1 ~TpLH~Aa~~G---~~e~v~~Ll~~~~~~~~-------~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~ 70 (335)
+||||+|+..| +.+++++|++.+++++. ..|..|+||||+|+..|+.+++++|++. .+.++|.+|.+
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~---~~~~~n~~d~~ 312 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE---KGSNKDKQDED 312 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH---SCCCTTCCCTT
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh---cCCCccCcCCC
Confidence 58999999998 89999999999988753 2577999999999999999999999932 34899999999
Q ss_pred CCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 71 GNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 71 G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
|+||||+|+..|+.++ ++| +..|++++.+|..|+||+|+|+..+.. +++++|.+.++
T Consensus 313 g~TpL~~A~~~g~~~iv~~L--------l~~gad~~~~d~~g~t~l~~A~~~g~~---~iv~~Ll~~~a 370 (373)
T 2fo1_E 313 GKTPIMLAAQEGRIEVVMYL--------IQQGASVEAVDATDHTARQLAQANNHH---NIVDIFDRCRP 370 (373)
T ss_dssp CCCHHHHHHHHTCHHHHHHH--------HHTTCCSSCCCSSSCCHHHHHHHTTCH---HHHHHHHTTC-
T ss_pred CCCHHHHHHHcCCHHHHHHH--------HHcCCCccCCCCCCCCHHHHHHHcCCH---HHHHHHHhcCc
Confidence 9999999999999999 888 889999999999999999999988754 88888877654
No 83
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.76 E-value=5.2e-19 Score=159.00 Aligned_cols=118 Identities=18% Similarity=0.066 Sum_probs=99.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCC-CchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKG-NTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G-~TpLH~Aa 79 (335)
+||||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+ ..|++++.+|..| .||||+|+
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~~t~L~~A~ 137 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFV----KKNWRLMFYGKTGWKTSFYHAV 137 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HHCGGGGGCSSSGGGSHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHH----hcCCCCCccCCCCCCCHHHHHH
Confidence 5899999999999999999999999865 7999999999999999999999999 5689999999999 79999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
..|+.++ ++| +..+.+.... +.|.||||+|+..+.. ++++.|.+
T Consensus 138 ~~~~~~~v~~L--------l~~g~~~~~~-~~g~t~L~~A~~~g~~---~~v~~Ll~ 182 (285)
T 3kea_A 138 MLNDVSIVSYF--------LSEIPSTFDL-AILLSCIHITIKNGHV---DMMILLLD 182 (285)
T ss_dssp HTTCHHHHHHH--------HTTSCTTCCC-STHHHHHHHHHHTTCH---HHHHHHHH
T ss_pred HcCCHHHHHHH--------HhCCCccccc-cCCccHHHHHHHcChH---HHHHHHHH
Confidence 9999988 777 6666655222 2788999999977754 55665554
No 84
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.76 E-value=7e-19 Score=158.30 Aligned_cols=117 Identities=19% Similarity=0.121 Sum_probs=105.9
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.||..|+.++++.|++.+++++. .|.+|+||||+|+..|+.+++++|+ ..|+++|.+|.+|+||||+|+..
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLERGADINY-ANVDGLTALHQACIDDNVDMVKFLV----ENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHCCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCcHHHHHHHc
Confidence 799999999999999999999999865 7999999999999999999999999 57899999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHH
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAK 134 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~ 134 (335)
|+.++ ++| +..|++++.+|.+|.||+|+|+..+ ..++++.+.
T Consensus 117 g~~~~v~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~---~~~~~~~ll 159 (299)
T 1s70_B 117 GYLDIAEYL--------ISQGAHVGAVNSEGDTPLDIAEEEA---MEELLQNEV 159 (299)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHCCSHH---HHHHHHHHH
T ss_pred CCHHHHHHH--------HhCCCCCCCcCCCCCCHHHHHHhcc---hHHHHHHHH
Confidence 99999 888 8889999999999999999998654 335555443
No 85
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.75 E-value=7.8e-19 Score=163.85 Aligned_cols=126 Identities=13% Similarity=0.048 Sum_probs=110.6
Q ss_pred CchHhHHHhcCCHHHHHHHh--------hhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCC
Q 019816 1 MTALHLAAGQGNDWIVQEII--------QRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGN 72 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll--------~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~ 72 (335)
+||||+||..|+.++++.|+ +.+.+++. +|.+|+||||+|+.+|+.+++++|+ ..|++++.+|.+|.
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~-~d~~g~TpL~~A~~~g~~~iv~~Ll----~~ga~~~~~~~~g~ 200 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA-MDCDENTPLMLAVLARRRRLVAYLM----KAGADPTIYNKSER 200 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTCC
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC-CCCCCCCHHHHHHHcChHHHHHHHH----HCCCCCcccCCCCC
Confidence 59999999999998877776 77888865 7999999999999999999999999 57899999999999
Q ss_pred chhHHHHhcCCCCc-ccccccCcccccccc---cccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 73 TPFHVLAAVCPDPR-PYNAGYGIIPYKIAK---GYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~---~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
||||+|+..|+.++ ++| +..+ .+++.+|.+|.||||+|+..+.....+++++|.+.++.
T Consensus 201 t~L~~A~~~g~~~~v~~L--------l~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~ 263 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYM--------LNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 263 (373)
T ss_dssp CHHHHHHHTTCHHHHHHH--------TTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC
T ss_pred CHHHHHHHCCCHHHHHHH--------HhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC
Confidence 99999999999998 777 6666 79999999999999999987654466888888876544
No 86
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.75 E-value=2.2e-18 Score=157.86 Aligned_cols=123 Identities=19% Similarity=0.097 Sum_probs=110.2
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV 81 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~ 81 (335)
||||.||+.|+.+.++.++...+.....+|..|+||||+|+..|+.+++++|+ ..|.++|.+|.+|+||||+|+..
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLL----QHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHT
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCcHHHHHHHC
Confidence 79999999999999999988744444558999999999999999999999999 56899999999999999999999
Q ss_pred CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
|+.++ ++| +..+++++.+|..|.||||+|+..+.. +++++|.+.++.
T Consensus 102 g~~~iv~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~ 149 (351)
T 3utm_A 102 GHYEVTELL--------LKHGACVNAMDLWQFTPLHEAASKNRV---EVCSLLLSHGAD 149 (351)
T ss_dssp TCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred CCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 99999 888 888999999999999999999988754 788888886654
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=7e-19 Score=148.36 Aligned_cols=124 Identities=15% Similarity=-0.064 Sum_probs=103.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCH----hHHHHHHhcCCcccccccccCCCCCchhH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDK----SDLKHLLNEYPVVKNLIFEKDVKGNTPFH 76 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH 76 (335)
.++||.|++.|+.+.++.++..+++. ..|..|+||||+|+.+++. +++++|+ ..|+++|.+|.+|+||||
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll----~~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLI----NKGADIKSRTKEGTTLFF 80 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHH----HTTCCSSCCCTTCCCTHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHH----HCCCCCCCCCCCCCcHHH
Confidence 37899999999999999999988644 2237899999999999975 4899999 579999999999999999
Q ss_pred HHHhcCCCC------c-ccccccCcccccccccccccccCCCC-CHHHHHHhcCCc--hHHHHHHHHHH-cCC
Q 019816 77 VLAAVCPDP------R-PYNAGYGIIPYKIAKGYYQAVNKQNI-SVEHINRYGFPE--LEKEIKELAKA-DGN 138 (335)
Q Consensus 77 ~Aa~~g~~~------~-~lL~~~~~~~~~~~~~~~~~~n~~G~-Tpl~~a~~~~~~--~~~~i~~~l~~-~~~ 138 (335)
+|+..++.+ + ++| +..|++++.+|++|+ ||||+|+..+.. ...++++.|.+ .|+
T Consensus 81 ~a~~~~~~~~~~~~~iv~~L--------l~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIF--------LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHH--------HHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred HHHHcCCcchhhHHHHHHHH--------HHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence 999999753 3 677 789999999999999 999999985432 24568887776 553
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=6e-18 Score=146.61 Aligned_cols=110 Identities=18% Similarity=0.056 Sum_probs=84.2
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++.....+..|+||||+|+..|+.++++.|+ ..+.+++.+|..|.||||+|+.
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 43 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM----KYGADPSLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence 478888888888888888888887776656666888888888888888888887 4567777778888888888888
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGF 122 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~ 122 (335)
.|+.++ ++| ...+.+++.+|..|.||+|+|+..+
T Consensus 119 ~~~~~~~~~L--------l~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 119 FGHTSIVAYL--------IAKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred cCHHHHHHHH--------HhcCCCccccCCCCCcHHHHHHHhC
Confidence 777777 666 6667777777777777777777433
No 89
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=3.6e-18 Score=148.04 Aligned_cols=121 Identities=18% Similarity=0.088 Sum_probs=106.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.++++.. +|..|+||||+|+..|+.++++.|+ ..+.+++.+|.+|+||||+|+.
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll----~~~~~~~~~~~~g~t~l~~a~~ 151 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFGHTSIVAYLI----AKGQDVDMMDQNGMTPLMWAAY 151 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCHHHHHHHHH----hcCCCccccCCCCCcHHHHHHH
Confidence 4899999999999999999999998855 7999999999999999999999999 4688999999999999999998
Q ss_pred cCC-CCc-ccccccCcccccccccccccccC-CCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816 81 VCP-DPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINRYGFPELEKEIKELAKADG 137 (335)
Q Consensus 81 ~g~-~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~i~~~l~~~~ 137 (335)
.++ ..+ ++| ...+.+++..+. .|.||||+|+..+.. +++++|.+.+
T Consensus 152 ~~~~~~~~~~L--------~~~~~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g 200 (240)
T 3eu9_A 152 RTHSVDPTRLL--------LTFNVSVNLGDKYHKNTALHWAVLAGNT---TVISLLLEAG 200 (240)
T ss_dssp HCCSSTTHHHH--------HHTTCCTTCCCTTTCCCHHHHHHHHTCH---HHHHHHHHHT
T ss_pred hCChHHHHHHH--------HhcCCCcchhhccCCCcHHHHHHHcCCH---HHHHHHHHcC
Confidence 777 455 888 888999999997 999999999987754 6777776644
No 90
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.74 E-value=8.7e-19 Score=143.03 Aligned_cols=104 Identities=14% Similarity=0.071 Sum_probs=81.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCc-hHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWN-VLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t-~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa 79 (335)
+||||+|+ .|+.+++++|++.+++++. +|..|+| |||+|+..|+.+++++|+ ..|++++.+|.+|+||||+|+
T Consensus 46 ~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~ 119 (156)
T 1bi7_B 46 RRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVHDAAREGFLDTLVVLH----RAGARLDVRDAWGRLPVDLAE 119 (156)
T ss_dssp CCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHHHHHHHTCHHHHHHHH----HHTCCSSCCCTTCCCHHHHHH
T ss_pred CCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHHCCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHH
Confidence 58999985 9999999999999998865 7999999 999999999999999999 578999999999999999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHH
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN 118 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a 118 (335)
..|+.++ ++| +..|++++.+|..|.||.+-+
T Consensus 120 ~~~~~~~v~~L--------l~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 120 ELGHRDVARYL--------RAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCHHHHHHH--------SSCC-----------------
T ss_pred HhCHHHHHHHH--------HHcCCCCCccCcCcCcccccC
Confidence 9999999 888 899999999999999997743
No 91
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.73 E-value=2.4e-18 Score=159.53 Aligned_cols=123 Identities=16% Similarity=0.012 Sum_probs=99.8
Q ss_pred chHhHHHhcCCHHHHHHHhhh----CCCccc----------------cccCCCCchHHHHHhcC--CHhHHHHHHhcCCc
Q 019816 2 TALHLAAGQGNDWIVQEIIQR----CPECCE----------------LVDDRGWNVLHFAMVSF--DKSDLKHLLNEYPV 59 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~----~~~~~~----------------~~d~~G~t~Lh~A~~~g--~~~~v~~Ll~~~~~ 59 (335)
||||+|+..|+.++++.|++. +.++.. ..|..|+||||+|+..| +.+++++|+ .
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll----~ 161 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILV----Q 161 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHH----H
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHH----H
Confidence 566666666666666666665 433321 16788999999999999 999999999 5
Q ss_pred ccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccc-----cccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816 60 VKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGY-----YQAVNKQNISVEHINRYGFPELEKEIKELA 133 (335)
Q Consensus 60 ~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~-----~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l 133 (335)
.|++++.+|.+|+||||+|+..|+.++ ++| +..+++ ++.+|..|.||||+|+..+.. +++++|
T Consensus 162 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~L--------l~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~---~~v~~L 230 (364)
T 3ljn_A 162 LGASPTAKDKADETPLMRAMEFRNREALDLM--------MDTVPSKSSLRLDYANKQGNSHLHWAILINWE---DVAMRF 230 (364)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH--------HHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH---HHHHHH
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHH--------HhcccccccccccccCCCCCcHHHHHHHcCCH---HHHHHH
Confidence 689999999999999999999999999 888 777777 999999999999999988754 788888
Q ss_pred HHcCCC
Q 019816 134 KADGNG 139 (335)
Q Consensus 134 ~~~~~~ 139 (335)
.+.|+.
T Consensus 231 l~~gad 236 (364)
T 3ljn_A 231 VEMGID 236 (364)
T ss_dssp HTTTCC
T ss_pred HHcCCC
Confidence 876543
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.73 E-value=6.2e-18 Score=155.10 Aligned_cols=124 Identities=18% Similarity=0.093 Sum_probs=105.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCC----HhHHHHHHhcCCcccccccccCCCCCchh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFD----KSDLKHLLNEYPVVKNLIFEKDVKGNTPF 75 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL 75 (335)
+||||+|++.|+.+++++||++ +.+++. +|..|+|++|+++..++ ..++++|+ ..|+++|.+|.+|+|||
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~-~d~~g~t~l~~~~~~~~~~~~~~i~~lLl----~~gad~n~~d~~g~t~L 243 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLL----DHGADVNVRGERGKTPL 243 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHHSCTTTHHHHHHHHH----HTTCCTTCCCGGGCCHH
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCc-cCCCCCcHHHHHHHHcCcccHHHHHHHHH----HCCCCCCCcCCCCCCHH
Confidence 4899999999999999999975 677754 79999999999876554 34677788 57899999999999999
Q ss_pred HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
|+|+..|+.+. ++|. ...+++++.+|.+|+||||+|+..+.. +++++|.++|+.
T Consensus 244 ~~a~~~~~~~~v~~Ll-------~~~~~~vn~~d~~G~TpL~~A~~~g~~---~iv~~Ll~~GAd 298 (337)
T 4g8k_A 244 ILAVEKKHLGLVQRLL-------EQEHIEINDTDSDGKTALLLAVELKLK---KIAELLCKRGAS 298 (337)
T ss_dssp HHHHHTTCHHHHHHHH-------TSTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHTTSCS
T ss_pred HHHHHhhhhHHHHHHH-------HhcCCcccCcCCCCCCHHHHHHHcCCH---HHHHHHHHCCCC
Confidence 99999999988 5540 456899999999999999999988854 888988887764
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.73 E-value=3.2e-18 Score=127.19 Aligned_cols=91 Identities=23% Similarity=0.133 Sum_probs=81.7
Q ss_pred CCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCC
Q 019816 33 RGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN 111 (335)
Q Consensus 33 ~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G 111 (335)
+|+||||+|+..|+.+++++|+ ..+.++|.+|.+|+||||+|+..|+.++ ++| +..|++++.+|.+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~L--------l~~ga~~~~~d~~g 68 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAARNGHLEVVKLL--------LEAGADVNAKDKNG 68 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTS
T ss_pred CCCcHHHHHHHcCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCCCCccCCCC
Confidence 5899999999999999999999 5788999999999999999999999999 888 88899999999999
Q ss_pred CCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 112 ISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 112 ~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
+||+|+|+..+.. +++++|.+.|+
T Consensus 69 ~t~l~~A~~~~~~---~~~~~Ll~~ga 92 (93)
T 1n0q_A 69 RTPLHLAARNGHL---EVVKLLLEAGA 92 (93)
T ss_dssp CCHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred CCHHHHHHHcCCH---HHHHHHHHcCC
Confidence 9999999988754 78888877664
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.72 E-value=1.3e-18 Score=159.57 Aligned_cols=113 Identities=15% Similarity=0.048 Sum_probs=94.8
Q ss_pred CchHhHHHhcCC---HHHHHHHhhhCCCccccccCCCCchHHHHHh----cCCHhHHHHHHhcCCcc-------------
Q 019816 1 MTALHLAAGQGN---DWIVQEIIQRCPECCELVDDRGWNVLHFAMV----SFDKSDLKHLLNEYPVV------------- 60 (335)
Q Consensus 1 ~TpLH~Aa~~G~---~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~----~g~~~~v~~Ll~~~~~~------------- 60 (335)
+||||+|+..|+ .++++.|++.+......+|..|+||||+|+. .|+.++++.|++.....
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~ 244 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence 599999999999 6788888887633335589999999999999 89999999998421000
Q ss_pred ---c-------------------------ccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCC
Q 019816 61 ---K-------------------------NLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN 111 (335)
Q Consensus 61 ---~-------------------------~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G 111 (335)
+ .++|.+|.+|+||||+|+..|+.++ ++| +..|++++.+|.+|
T Consensus 245 ~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~L--------l~~Gad~~~~d~~G 316 (327)
T 1sw6_A 245 NEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL--------LDYGADPFIANKSG 316 (327)
T ss_dssp ---------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHH--------HHTTCCTTCCCTTS
T ss_pred hcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCCCcccCCCC
Confidence 0 0588999999999999999999999 888 88999999999999
Q ss_pred CCHHHHHHhc
Q 019816 112 ISVEHINRYG 121 (335)
Q Consensus 112 ~Tpl~~a~~~ 121 (335)
+||||+|++.
T Consensus 317 ~TpL~~A~~~ 326 (327)
T 1sw6_A 317 LRPVDFGAGL 326 (327)
T ss_dssp CCGGGGTCC-
T ss_pred CCHHHHHHhc
Confidence 9999999864
No 95
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.71 E-value=2.4e-17 Score=151.13 Aligned_cols=123 Identities=14% Similarity=0.026 Sum_probs=109.3
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||.|+++|+.++|+.||++|++++...+..|+||||+|+.+|+.+++++|+ ..|++++.+|..+.+|+|.++.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll----~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL----RHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHH----HcCCchhhhccCCCchhHHHHh
Confidence 379999999999999999999999997644556999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
.+.... ..+ ...+.+++.+|..|.||+++|+..+.. ++++.+.+.++
T Consensus 102 ~~~~~~~~~~--------~~~~~~~~~~d~~g~t~l~~A~~~~~~---~~~~~ll~~ga 149 (337)
T 4g8k_A 102 AGSVKLLKLF--------LSKGADVNECDFYGFTAFMEAAVYGKV---KALKFLYKRGA 149 (337)
T ss_dssp HTCHHHHHHH--------HTTTCCTTCBCTTCCBHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred cccchhhHHh--------hhccchhhhhccCCCCHHHHHHHcCcH---HHHHHHHHcCC
Confidence 988887 666 778899999999999999999988754 67777776554
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.71 E-value=3.5e-18 Score=154.93 Aligned_cols=105 Identities=20% Similarity=0.084 Sum_probs=89.1
Q ss_pred CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816 1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV 77 (335)
Q Consensus 1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~ 77 (335)
+||||+|+.. |+.+++++|++.+++++. +|.+|+||||+|+..|+.+++++|+ ..|++++.+|.+|+||||+
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll----~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTALHYAALYNQPDCLKLLL----KGRALVGTVNEAGETALDI 265 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCCSCCCTTSCCHHHH
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHH
Confidence 4899999997 899999999999999865 7999999999999999999999999 5789999999999999999
Q ss_pred HHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCc
Q 019816 78 LAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPE 124 (335)
Q Consensus 78 Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~ 124 (335)
|+..|+.++ ++| +..+++ .|.||||+|+.++.+
T Consensus 266 A~~~~~~~iv~~L--------l~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELL--------EQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHH--------HHHHHH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHH--------HHhcCC------CCCChhHHHHhcCCc
Confidence 999999999 888 666654 689999999987643
No 97
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.67 E-value=2.3e-17 Score=147.55 Aligned_cols=136 Identities=10% Similarity=-0.004 Sum_probs=110.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCC-ccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccc-cccccCCCCCchhHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPE-CCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKN-LIFEKDVKGNTPFHVL 78 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~-~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~n~~d~~G~TpLH~A 78 (335)
++++|.|+..|+.+.++.+++...+ ..+.+|.+|+||||+|+..|+.++++.|+ ..+. +++.+|.+|.||||+|
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLL----DSGVCKVDKQNRAGYSPIMLT 152 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTSCCCTTCCCTTSCCHHHHG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHH----HCCCCcCCCCCCCCCCHHHHH
Confidence 4789999999999999999887655 13447999999999999999999999999 4565 9999999999999999
Q ss_pred Hhc-----CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcc
Q 019816 79 AAV-----CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDG 144 (335)
Q Consensus 79 a~~-----g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~ 144 (335)
+.. ++.++ ++| ...+.+.+..|..|+||||+|+..+.. ++++.|.+.| .|.+|++
T Consensus 153 ~~~~~~~~~~~~~v~~L--------l~~g~~~~~~~~~g~tpLh~A~~~g~~---~~v~~Ll~~gad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQL--------FRLGNINAKASQAGQTALMLAVSHGRV---DVVKALLACEADVNVQDDDGSTALM 221 (276)
T ss_dssp GGCCCCSHHHHHHHHHH--------HHHSCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHhhhhhhHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 954 44444 666 677888899999999999999988754 7788777743 4567888
Q ss_pred hhhhhhh
Q 019816 145 VIKMNKE 151 (335)
Q Consensus 145 ~~~~~~~ 151 (335)
.......
T Consensus 222 ~A~~~g~ 228 (276)
T 4hbd_A 222 CACEHGH 228 (276)
T ss_dssp HHHHHTC
T ss_pred HHHHCCC
Confidence 7655443
No 98
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.67 E-value=8e-18 Score=146.51 Aligned_cols=106 Identities=23% Similarity=0.159 Sum_probs=91.0
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHHH-
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVL- 78 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~A- 78 (335)
+||||+||..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..|++++.+| .+|+||||+|
T Consensus 55 ~tpLh~A~~~g~~~~v~~Ll~~ga~~n~-~d~~g~tpLh~A~~~g~~~~v~~Ll----~~ga~~~~~~~~~g~tpL~~A~ 129 (229)
T 2vge_A 55 ITALHNAICGANYSIVDFLITAGANVNS-PDSHGWTPLHCAASCNDTVICMALV----QHGAAIFATTLSDGATAFEKCD 129 (229)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----TTTCCTTCCCSSTTCCTGGGCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCcccccCCCCCCHHHHHH
Confidence 5999999999999999999999999865 7999999999999999999999999 5789999987 6999999999
Q ss_pred -HhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816 79 -AAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR 119 (335)
Q Consensus 79 -a~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~ 119 (335)
+..|+.++ ++| +..|++++.+|..|.||++.+.
T Consensus 130 a~~~~~~~~v~~L--------l~~ga~~~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 130 PYREGYADCATYL--------ADVEQSMGLMNSGAVYALWDYS 164 (229)
T ss_dssp TTSTTHHHHHHHH--------HHHHHHTTTSGGGEEEESSCBC
T ss_pred HHhcChHHHHHHH--------HHcCCCcccccCCchHHHHHHh
Confidence 88888888 777 5666666666666666665433
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.66 E-value=1.9e-16 Score=132.64 Aligned_cols=104 Identities=17% Similarity=0.118 Sum_probs=89.8
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++++++++...+..|+||||+|+..|+.+++++|+ ..|++++.+|.+|+||||+|++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 77 RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV----ELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHH----HcCCCCcCCCCCCCCHHHHHHH
Confidence 599999999999999999999999997643489999999999999999999999 5789999999999999999998
Q ss_pred cCCCCcccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816 81 VCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA 135 (335)
Q Consensus 81 ~g~~~~~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~ 135 (335)
.++. ..+.+|+++++..+ ..+++++|.+
T Consensus 153 ~~~~------------------------~~~~~~l~~a~~~~---~~~i~~~L~~ 180 (183)
T 3deo_A 153 ILKT------------------------TPKGNPMQFGRRIG---LEKVINVLEG 180 (183)
T ss_dssp HHHT------------------------CCCCSHHHHHHHHH---HHHHHHHHHT
T ss_pred hccC------------------------cccccHHHHHHHcC---HHHHHHHHHH
Confidence 5433 23578999999776 4577777764
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.66 E-value=1.1e-16 Score=127.45 Aligned_cols=95 Identities=23% Similarity=0.107 Sum_probs=85.6
Q ss_pred cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccc
Q 019816 29 LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAV 107 (335)
Q Consensus 29 ~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~ 107 (335)
.+|.+|+||||+|+..|+.++++.|+ ..+.+++.+|.+|+||||+|+..|+.++ ++| +..+++++.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L--------l~~g~~~~~~ 72 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLL----QNGSDPNVKDHAGWTPLHEACNHGHLKVVELL--------LQHKALVNTT 72 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCcccCc
Confidence 36999999999999999999999999 4688999999999999999999999999 888 7889999999
Q ss_pred cCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816 108 NKQNISVEHINRYGFPELEKEIKELAKADGN 138 (335)
Q Consensus 108 n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~ 138 (335)
|..|+||||+|+..+.. +++++|.+.++
T Consensus 73 ~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga 100 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHV---DIVKLLLSYGA 100 (137)
T ss_dssp CGGGCCHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHcCCH---HHHHHHHHcCC
Confidence 99999999999988754 77887777544
No 101
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.65 E-value=9.2e-17 Score=123.24 Aligned_cols=84 Identities=21% Similarity=0.151 Sum_probs=74.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+ ..|++++.+|.+|+||||+|+.
T Consensus 25 ~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 25 GKKLLEAARAGQDDEVRILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLL----EAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCccccccCCCcHHHHHHH
Confidence 3789999999999999999999988865 7899999999999999999999999 4688999999999999999999
Q ss_pred cCCCCc-ccc
Q 019816 81 VCPDPR-PYN 89 (335)
Q Consensus 81 ~g~~~~-~lL 89 (335)
.|+.++ ++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 988776 544
No 102
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.65 E-value=3.7e-17 Score=130.13 Aligned_cols=83 Identities=13% Similarity=-0.027 Sum_probs=77.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCC-CCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDR-GWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa 79 (335)
+||||+|+. |+.+++++|++++++++. +|.. |+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+
T Consensus 46 ~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~ 119 (136)
T 1d9s_A 46 RRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLTRPVHDAAREGFLDTLVVLH----RAGARLDVCDAWGRLPVDLAE 119 (136)
T ss_dssp CTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTBCHHHHHHHHTCHHHHHHHH----HTCCCCCCCSSSSSCHHHHHH
T ss_pred CCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHH
Confidence 589999999 999999999999999866 7888 999999999999999999999 578999999999999999999
Q ss_pred hcCCCCc-ccc
Q 019816 80 AVCPDPR-PYN 89 (335)
Q Consensus 80 ~~g~~~~-~lL 89 (335)
..++.++ ++|
T Consensus 120 ~~~~~~~~~~L 130 (136)
T 1d9s_A 120 EQGHRDIARYL 130 (136)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHH
Confidence 9999988 777
No 103
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.65 E-value=1.4e-16 Score=126.78 Aligned_cols=84 Identities=23% Similarity=0.209 Sum_probs=78.4
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+ ..+++++.+|.+|+||||+|+.
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~tpl~~A~~ 122 (136)
T 2jab_A 48 LTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAAFIGHLEIAEVLL----KHGADVNAQDKFGKTAFDISIG 122 (136)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCcCcCCCCCCHHHHHHH
Confidence 5899999999999999999999999865 7999999999999999999999999 5688999999999999999999
Q ss_pred cCCCCc-ccc
Q 019816 81 VCPDPR-PYN 89 (335)
Q Consensus 81 ~g~~~~-~lL 89 (335)
.|+.++ ++|
T Consensus 123 ~~~~~~~~~L 132 (136)
T 2jab_A 123 NGNEDLAEIL 132 (136)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 999888 666
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.64 E-value=2.1e-16 Score=121.78 Aligned_cols=96 Identities=23% Similarity=0.186 Sum_probs=87.3
Q ss_pred cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccc
Q 019816 29 LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAV 107 (335)
Q Consensus 29 ~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~ 107 (335)
.+|.+|+||||+|+..|+.++++.|+ ..+.+++.+|..|+||||+|+..++.++ ++| +..+++++.+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~L--------l~~g~~~~~~ 71 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLL----SKGADVNARSKDGNTPLHLAAKNGHAEIVKLL--------LAKGADVNAR 71 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHT----TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHH--------TTTTCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH--------HHcCCCCccc
Confidence 36899999999999999999999999 5688999999999999999999999998 888 8889999999
Q ss_pred cCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 108 NKQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 108 n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
|..|+||||+|+..+.. +++++|.+.|+.
T Consensus 72 d~~g~tpl~~A~~~~~~---~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 72 SKDGNTPEHLAKKNGHH---EIVKLLDAKGAD 100 (115)
T ss_dssp CTTCCCTTHHHHTTTCH---HHHHHHHTTSSS
T ss_pred CCCCCCHHHHHHHCCCH---HHHHHHHHcCCC
Confidence 99999999999988744 788888887765
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.62 E-value=2.6e-16 Score=152.29 Aligned_cols=102 Identities=23% Similarity=0.114 Sum_probs=83.7
Q ss_pred CchHhHHHh---cCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816 1 MTALHLAAG---QGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV 77 (335)
Q Consensus 1 ~TpLH~Aa~---~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~ 77 (335)
+||||+|++ .|+.+++++|++++++++. +|.+|+||||+|+.+|+.+++++|+ ..|+++|.+|.+|+||||+
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~-~d~~g~TpLh~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTALHYAALYNQPDCLKLLL----KGRALVGTVNEAGETALDI 246 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC-CCSSSCCHHHHHTTTTCHHHHHHHH----HTCCCCSCCCTTCCCHHHH
T ss_pred chHHHHHHHhcccccHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHH
Confidence 589999966 9999999999999999966 7999999999999999999999999 5799999999999999999
Q ss_pred HHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhc
Q 019816 78 LAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG 121 (335)
Q Consensus 78 Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~ 121 (335)
|+..|+.++ ++| +..|++++. ||+|.+..+
T Consensus 247 A~~~~~~~~~~~L--------l~~ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 247 ARKKHHKECEELL--------EQAQAGTFA------FPLHVDYSW 277 (497)
T ss_dssp HHHTTCHHHHHHH--------HHTCC-------------------
T ss_pred HHHcCCHHHHHHH--------HHhCCCCCC------Ccceeeccc
Confidence 999999999 888 888988877 466665543
No 106
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.62 E-value=4.5e-16 Score=121.17 Aligned_cols=84 Identities=27% Similarity=0.254 Sum_probs=78.6
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+ ..+.+++.+|.+|+||||+|+.
T Consensus 36 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~l~~A~~ 110 (126)
T 1n0r_A 36 RTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAAR 110 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcChHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence 5899999999999999999999998855 7999999999999999999999999 5688999999999999999999
Q ss_pred cCCCCc-ccc
Q 019816 81 VCPDPR-PYN 89 (335)
Q Consensus 81 ~g~~~~-~lL 89 (335)
.|+.++ ++|
T Consensus 111 ~~~~~~~~~L 120 (126)
T 1n0r_A 111 NGHLEVVKLL 120 (126)
T ss_dssp TTCHHHHHHH
T ss_pred cCcHHHHHHH
Confidence 999988 777
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.61 E-value=3.6e-16 Score=140.05 Aligned_cols=84 Identities=25% Similarity=0.245 Sum_probs=79.6
Q ss_pred CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816 1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV 77 (335)
Q Consensus 1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~ 77 (335)
+||||+|+.. |+.+++++|++++++++. +|..|+||||+|+.+|+.+++++|+ ..|+++|.+|.+|+||||+
T Consensus 170 ~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~TpLh~A~~~g~~~~v~~Ll----~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTALHYCCLTDNAECLKLLL----RGKASIEIANESGETPLDI 244 (278)
T ss_dssp CBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHH
T ss_pred CCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCccCCCCCHHHH
Confidence 5999999999 899999999999999865 7999999999999999999999999 5789999999999999999
Q ss_pred HHhcCCCCc-ccc
Q 019816 78 LAAVCPDPR-PYN 89 (335)
Q Consensus 78 Aa~~g~~~~-~lL 89 (335)
|+..|+.++ ++|
T Consensus 245 A~~~~~~~~v~~L 257 (278)
T 1dcq_A 245 AKRLKHEHCEELL 257 (278)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHH
Confidence 999999998 777
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.61 E-value=2.3e-16 Score=120.99 Aligned_cols=94 Identities=17% Similarity=0.030 Sum_probs=78.8
Q ss_pred CccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccc
Q 019816 25 ECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGY 103 (335)
Q Consensus 25 ~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~ 103 (335)
......|.+|+||||+|+..|+.++++.|+ ..+.++|.+|.+|+||||+|+..|+.++ ++| +..|++
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~L--------l~~ga~ 82 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILM----ANGADVAAKDKNGSTPLHLAARNGHLEVVKLL--------LEAGAD 82 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH--------HHTTCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCC
Confidence 334557899999999999999999999999 4688999999999999999999999999 888 788999
Q ss_pred cccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816 104 YQAVNKQNISVEHINRYGFPELEKEIKELA 133 (335)
Q Consensus 104 ~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l 133 (335)
++.+|..|+||+|+|+..+.. ++++.|
T Consensus 83 ~~~~d~~g~tpl~~A~~~~~~---~~~~~L 109 (110)
T 2zgd_A 83 VXAQDKFGKTAFDISIDNGNE---DLAEIL 109 (110)
T ss_dssp TTCCCTTSCCHHHHHHHHTCH---HHHHHH
T ss_pred ccccccCCCcHHHHHHHcCCH---HHHHHh
Confidence 999999999999999987754 555543
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.61 E-value=1.9e-17 Score=154.46 Aligned_cols=119 Identities=8% Similarity=-0.079 Sum_probs=95.7
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCcc--ccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccc---ccccCCCCCchhH
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECC--ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL---IFEKDVKGNTPFH 76 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~--~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~---~n~~d~~G~TpLH 76 (335)
||||+||+.|+.+++++|++.++... ...|..|+||||+|+.+|+.+++++|+ ..|++ .+..+.+ +||||
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll----~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC----ELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH----HSCTTTHHHHHSHHH-HHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH----hCCCCccccccCCCC-CCHHH
Confidence 89999999999999999999986321 124667899999999999999999999 34532 2223333 99999
Q ss_pred HHHhcCCCCc-ccccccCccccccccccccc--ccCCCCCHHHHHH-hcCCchHHHHHHHHHHc
Q 019816 77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQA--VNKQNISVEHINR-YGFPELEKEIKELAKAD 136 (335)
Q Consensus 77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~--~n~~G~Tpl~~a~-~~~~~~~~~i~~~l~~~ 136 (335)
+|+..|+.++ ++| +..|++++. +|.+|.||||+|+ ..+.. +++++|.+.
T Consensus 169 ~Aa~~G~~eiv~~L--------l~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~---eiv~~Ll~~ 221 (376)
T 2aja_A 169 LAAENGHLHVLNRL--------CELAPTEATAMIQAENYYAFRWAAVGRGHH---NVINFLLDC 221 (376)
T ss_dssp HHHHTTCHHHHHHH--------HHSCGGGHHHHHHHHHHHHHHHHHSTTCCH---HHHHHHTTS
T ss_pred HHHHCCCHHHHHHH--------HHcCCccchhccCCCCCCHHHHHHHHCCCH---HHHHHHHhC
Confidence 9999999999 888 888999887 9999999999999 88854 777777663
No 110
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.59 E-value=3.9e-16 Score=134.58 Aligned_cols=98 Identities=16% Similarity=0.074 Sum_probs=76.5
Q ss_pred CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816 1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA 79 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa 79 (335)
+||||+||..|+.+++++|++. +.+++. +|..|+||||+|+..|+.+++++|+ ..|++++.+|.+|+||||+|+
T Consensus 107 ~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll----~~ga~~~~~~~~g~t~l~~A~ 181 (222)
T 3ehr_A 107 STALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALHAAAWKGYADIVQLLL----AKGARTDLRNIEKKLAFDMAT 181 (222)
T ss_dssp CCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HHTCCSCCCCTTSCCHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCccccCCCCCHHHHhc
Confidence 5999999999999999999998 777755 7999999999999999999999999 578999999999999999999
Q ss_pred hcCCCCc-ccccccCcccccccccccccccCCC
Q 019816 80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN 111 (335)
Q Consensus 80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G 111 (335)
..++.++ +.+ ...+++.+..|.+|
T Consensus 182 ~~~~~~~l~~l--------~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 182 NAACASLLKKK--------QGTDAVRTLSNAED 206 (222)
T ss_dssp SHHHHHHHC------------------------
T ss_pred chhHHHHHHHH--------hccchhhhccchhh
Confidence 9988888 777 67777777777654
No 111
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.58 E-value=1.5e-15 Score=118.48 Aligned_cols=95 Identities=14% Similarity=0.065 Sum_probs=82.5
Q ss_pred ccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCccccccccccccccc
Q 019816 30 VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVN 108 (335)
Q Consensus 30 ~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n 108 (335)
.+..|.||||+|+..|+.++++.|+ ..+.+++.+|.+|+||||+|+..|+.++ ++| +..+++++.+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll----~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L--------l~~g~~~~~~d 70 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYV----AKGEDVNRTLEGGRKPLHYAADCGQLEILEFL--------LLKGADINAPD 70 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHH----HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHH--------HTTTCCTTCCC
T ss_pred cccccchHHHHHHHcCCHHHHHHHH----HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHH--------HHcCCCCCcCC
Confidence 3678999999999999999999999 4678899999999999999999999999 888 88899999999
Q ss_pred CCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816 109 KQNISVEHINRYGFPELEKEIKELAKADGNG 139 (335)
Q Consensus 109 ~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~ 139 (335)
.+|+||||+|+..+.. ++++.|.+.++.
T Consensus 71 ~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~ 98 (123)
T 3aaa_C 71 KHHITPLLSAVYEGHV---SCVKLLLSKGAD 98 (123)
T ss_dssp TTSCCHHHHHHHHTCH---HHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence 9999999999987754 788888876554
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.58 E-value=1.2e-15 Score=141.85 Aligned_cols=108 Identities=14% Similarity=0.061 Sum_probs=79.9
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+ ..|++++.+|.+|+||||+|+.
T Consensus 236 ~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh~A~~~g~~~~v~~LL----~~Gad~~~~d~~G~TpL~~A~~ 310 (368)
T 3jue_A 236 ATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLHHATILGHTGLACLFL----KRGADLGARDSEGRDPLTIAME 310 (368)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCcHHHHHHHH----HCcCCCCCcCCCCCCHHHHHHH
Confidence 5899999999999999999999999865 7999999999999999999999999 5789999999999999999999
Q ss_pred cCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHhc
Q 019816 81 VCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRYG 121 (335)
Q Consensus 81 ~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~~ 121 (335)
.++.++ ++| +. .+.+....+..+.|+++++...
T Consensus 311 ~g~~~iv~lL--------l~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 311 TANADIVTLL--------RLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp TTCHHHHHHH--------HHHHC----------------------
T ss_pred CCCHHHHHHH--------HHcCCCcccccccCCCCCCHHHHHHHH
Confidence 999998 666 32 2344456677888998887754
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.53 E-value=3.3e-16 Score=146.13 Aligned_cols=112 Identities=11% Similarity=0.001 Sum_probs=92.1
Q ss_pred chHhHHHhcCCHHHHHHHhhhCCCcc--ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc--cCCCCCchhHH
Q 019816 2 TALHLAAGQGNDWIVQEIIQRCPECC--ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE--KDVKGNTPFHV 77 (335)
Q Consensus 2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~--~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~--~d~~G~TpLH~ 77 (335)
||||+||+.|+.+++++|++++++.. ...+.+ +||||+|+.+|+.+++++|+ ..|++++. +|.+|+||||+
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll----~~ga~~~~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLC----ELAPTEATAMIQAENYYAFRW 204 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHH----HSCGGGHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHH----HcCCccchhccCCCCCCHHHH
Confidence 79999999999999999999997631 112223 99999999999999999999 56788887 89999999999
Q ss_pred HH-hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 78 LA-AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 78 Aa-~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
|+ ..|+.++ ++| +..|. .|.||+++|+..+.. +++++|.+.
T Consensus 205 Aa~~~G~~eiv~~L--------l~~ga-------~~~taL~~Aa~~g~~---evv~lL~~~ 247 (376)
T 2aja_A 205 AAVGRGHHNVINFL--------LDCPV-------MLAYAEIHEFEYGEK---YVNPFIARH 247 (376)
T ss_dssp HHSTTCCHHHHHHH--------TTSHH-------HHHHHHHCTTTTTTT---THHHHHHHH
T ss_pred HHHHCCCHHHHHHH--------HhCCC-------ccchHHHHHHHCCCH---HHHHHHHhc
Confidence 99 9999999 887 55553 288999999988754 455555553
No 114
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.51 E-value=2.4e-14 Score=125.55 Aligned_cols=105 Identities=17% Similarity=0.121 Sum_probs=90.8
Q ss_pred CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816 1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA 80 (335)
Q Consensus 1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~ 80 (335)
+||||+||..|+.+++++|++++++++...+..|+||||+|+.+|+.+++++|+ ..|+++|.+|.+|+||||+|+.
T Consensus 78 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 78 RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV----ELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCcHHHHHHH
Confidence 599999999999999999999999997743488999999999999999999999 5689999999999999999987
Q ss_pred cCCCCcccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816 81 VCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD 136 (335)
Q Consensus 81 ~g~~~~~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~ 136 (335)
.++ +..+.||+++|+..+ ..++++.|.+.
T Consensus 154 ~~~------------------------~~~~~~~l~~a~~~g---~~~iv~~L~~~ 182 (244)
T 3ui2_A 154 ILK------------------------TTPKGNPMQFGRRIG---LEKVINVLEGQ 182 (244)
T ss_dssp HHT------------------------TCCCSSHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHh------------------------ccCCCCHHHHHHHcC---hHHHHHHHHHh
Confidence 422 245789999999877 44677777663
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=61.04 E-value=41 Score=29.79 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHhc---CCCch
Q 019816 267 LSFTLVAMAAMIVAFVTGTYAMLA---TPSLG 295 (335)
Q Consensus 267 ~~~~~~s~~~m~~af~~~~~~~~~---~~~~~ 295 (335)
..++.+|++++..+|++|+|-+=. |...|
T Consensus 280 k~LTiit~IflP~T~IaGiyGMNf~~mPel~~ 311 (339)
T 4ev6_A 280 KILTMVTTIFAVPMWITGIYGMNFSYLPLANN 311 (339)
T ss_dssp HHHHHHHHHSSHHHHHHHHTTCCCSCCTTSSC
T ss_pred HHHHHHHHHHHHHHHHHhhccCcCCCCCCccC
Confidence 467888889999999999996521 55554
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=56.41 E-value=37 Score=30.44 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHH----hcCCCch
Q 019816 267 LSFTLVAMAAMIVAFVTGTYAM----LATPSLG 295 (335)
Q Consensus 267 ~~~~~~s~~~m~~af~~~~~~~----~~~~~~~ 295 (335)
..++.+|++++..+|++|+|-+ + |...|
T Consensus 304 k~LTiit~IflP~T~IaGiyGMNf~~m-Pel~~ 335 (363)
T 2iub_A 304 KVLTIIATIFMPLTFIAGIYGMNFEYM-PELRW 335 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC------------
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCC-CcccC
Confidence 4678888999999999999964 4 65555
No 117
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=50.22 E-value=14 Score=22.29 Aligned_cols=30 Identities=13% Similarity=0.501 Sum_probs=17.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhcccchh
Q 019816 296 LAIVTCIIGLTFFLLVIFMFYMVFSRAEEE 325 (335)
Q Consensus 296 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (335)
..|+..++++.+++++.+...++++|..+.
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 356666666555555666666666665544
No 118
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=40.06 E-value=21 Score=22.55 Aligned_cols=23 Identities=9% Similarity=0.355 Sum_probs=10.1
Q ss_pred chhhhHHHHH-HHHHHHHHHHHHH
Q 019816 294 LGLAIVTCII-GLTFFLLVIFMFY 316 (335)
Q Consensus 294 ~~~~i~~~~~-~~~~~~~~~~~~~ 316 (335)
.|+.|.+.++ ++.++.++.+.+|
T Consensus 11 p~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 3454444443 4333334444444
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=30.99 E-value=36 Score=19.69 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=12.4
Q ss_pred HhHHHhcCCHHHHHHHh
Q 019816 4 LHLAAGQGNDWIVQEII 20 (335)
Q Consensus 4 LH~Aa~~G~~e~v~~Ll 20 (335)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45678888888877664
No 120
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.88 E-value=50 Score=19.82 Aligned_cols=29 Identities=24% Similarity=0.372 Sum_probs=13.6
Q ss_pred hhhHHHHHH-HHHHHHHHHHHHhhhcccch
Q 019816 296 LAIVTCIIG-LTFFLLVIFMFYMVFSRAEE 324 (335)
Q Consensus 296 ~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~ 324 (335)
.+|+..+++ +.+++++.+..++++++...
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 356665555 33333344444455444443
No 121
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=27.26 E-value=68 Score=19.22 Aligned_cols=29 Identities=24% Similarity=0.341 Sum_probs=13.3
Q ss_pred hhhHHHHHH-HHHHHHHHHHHHhhhcccch
Q 019816 296 LAIVTCIIG-LTFFLLVIFMFYMVFSRAEE 324 (335)
Q Consensus 296 ~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~ 324 (335)
.+|+..+++ +.+++++....++++++...
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 356665555 33333333444444444433
No 122
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=21.87 E-value=39 Score=22.53 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHhhh--cccchhhHh
Q 019816 301 CIIGLTFFLLVIFMFYMVF--SRAEEEEYE 328 (335)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 328 (335)
.+|.++.+-.+..-+|+++ .|..++|.|
T Consensus 20 iliavaalg~li~gcwcylrlqri~qsede 49 (90)
T 1zza_A 20 ILIAIAALGALILGCWCYLRLQRISQSEDE 49 (90)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCSSCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3344333333334444444 455554433
Done!