Your job contains 1 sequence.
>019817
MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS
IPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA
YNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAGAAPVSGVPNSSPLNMFPQET
LSGAPAGGLGSLDFLRNNQQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEA
MGFDRALVIEAFLACDRNEELAANYLLENAGDFED
The BLAST search returned 13 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019817
(335 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200522 - symbol:RAD23A "RADIATION SENSITIVE23... 683 2.3e-99 2
TAIR|locus:2076944 - symbol:RAD23C "RADIATION SENSITIVE23... 330 9.2e-80 3
TAIR|locus:2177376 - symbol:RAD23D "RADIATION SENSITIVE23... 522 6.7e-75 2
RGD|1562958 - symbol:Rad23b "RAD23 homolog B (S. cerevisi... 189 2.2e-39 3
ZFIN|ZDB-GENE-040426-1487 - symbol:rad23b "RAD23 homolog ... 179 2.4e-38 3
MGI|MGI:105128 - symbol:Rad23b "RAD23b homolog (S. cerevi... 186 3.0e-37 3
UNIPROTKB|F1SP32 - symbol:RAD23B "Uncharacterized protein... 184 4.3e-37 3
UNIPROTKB|P54727 - symbol:RAD23B "UV excision repair prot... 184 5.5e-37 3
UNIPROTKB|A3KMV2 - symbol:RAD23A "UV excision repair prot... 175 9.4e-37 3
UNIPROTKB|F1PTL1 - symbol:RAD23A "Uncharacterized protein... 175 1.2e-36 3
ZFIN|ZDB-GENE-051113-160 - symbol:zgc:123349 "rad23ab" sp... 174 6.3e-36 3
UNIPROTKB|F1SD96 - symbol:RAD23A "Uncharacterized protein... 175 7.4e-36 3
UNIPROTKB|E2R4A5 - symbol:RAD23B "Uncharacterized protein... 180 9.4e-36 3
UNIPROTKB|P54725 - symbol:RAD23A "UV excision repair prot... 170 1.2e-35 3
UNIPROTKB|Q29RK4 - symbol:RAD23B "UV excision repair prot... 180 1.6e-35 3
ZFIN|ZDB-GENE-040808-59 - symbol:rad23aa "RAD23 homolog A... 175 5.5e-35 3
MGI|MGI:105126 - symbol:Rad23a "RAD23a homolog (S. cerevi... 163 2.0e-34 3
UNIPROTKB|D4AD39 - symbol:Rad23a "RAD23a homolog (S. cere... 162 2.3e-34 3
TAIR|locus:2181362 - symbol:AT5G16090 species:3702 "Arabi... 204 3.4e-32 2
UNIPROTKB|K7ESE3 - symbol:RAD23A "UV excision repair prot... 170 1.1e-31 3
ASPGD|ASPL0000045893 - symbol:AN2304 species:162425 "Emer... 159 1.6e-30 3
UNIPROTKB|F1N9B7 - symbol:RAD23B "Uncharacterized protein... 154 7.9e-29 3
DICTYBASE|DDB_G0286357 - symbol:rcbA "repC-binding protei... 219 3.6e-28 2
POMBASE|SPBC2D10.12 - symbol:rhp23 "Rad23 homolog Rhp23" ... 159 9.8e-28 3
GENEDB_PFALCIPARUM|PF10_0114 - symbol:PF10_0114 "DNA repa... 150 7.5e-27 3
UNIPROTKB|Q8IJS8 - symbol:PF10_0114 "DNA repair protein R... 150 7.5e-27 3
UNIPROTKB|G4MUE8 - symbol:MGG_01656 "UV excision repair p... 155 1.5e-26 4
FB|FBgn0026777 - symbol:Rad23 "Rad23" species:7227 "Droso... 138 6.0e-26 3
FB|FBgn0039147 - symbol:CG10694 species:7227 "Drosophila ... 204 6.2e-24 2
RGD|1309899 - symbol:Rad23a "RAD23 homolog A (S. cerevisi... 162 1.0e-23 3
SGD|S000000763 - symbol:RAD23 "Protein with ubiquitin-lik... 139 1.2e-21 3
UNIPROTKB|B4DDJ7 - symbol:RAD23A "cDNA FLJ51789, highly s... 158 1.9e-21 2
WB|WBGene00013924 - symbol:rad-23 species:6239 "Caenorhab... 139 2.2e-21 3
UNIPROTKB|Q5W0S5 - symbol:RAD23B "UV excision repair prot... 184 2.3e-14 1
UNIPROTKB|P61282 - symbol:NEDD8 "NEDD8" species:9913 "Bos... 129 3.9e-08 1
UNIPROTKB|Q15843 - symbol:NEDD8 "NEDD8" species:9606 "Hom... 129 3.9e-08 1
MGI|MGI:97301 - symbol:Nedd8 "neural precursor cell expre... 129 3.9e-08 1
RGD|3158 - symbol:Nedd8 "neural precursor cell expressed,... 129 3.9e-08 1
UNIPROTKB|F5GXK7 - symbol:UBC "Polyubiquitin-C" species:9... 128 5.0e-08 1
UNIPROTKB|F1NGE3 - symbol:UBB "Polyubiquitin-B" species:9... 126 8.5e-08 1
UNIPROTKB|Q91021 - symbol:UBB "Ubiquitin" species:9031 "G... 126 8.5e-08 1
UNIPROTKB|F5H265 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
UNIPROTKB|F5H388 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
UNIPROTKB|F5H747 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
UNIPROTKB|F5H7Y5 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
UNIPROTKB|P62972 - symbol:P62972 "Polyubiquitin" species:... 126 8.5e-08 1
UNIPROTKB|G3V9Z2 - symbol:LOC100360548 "Protein LOC100360... 126 8.5e-08 1
UNIPROTKB|F5GYU3 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
UNIPROTKB|F5H2Z3 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
UNIPROTKB|F5H6Q2 - symbol:UBC "Polyubiquitin-C" species:9... 126 8.5e-08 1
FB|FBgn0003941 - symbol:RpL40 "Ribosomal protein L40" spe... 126 8.5e-08 1
FB|FBgn0003942 - symbol:RpS27A "Ribosomal protein S27A" s... 126 8.5e-08 1
UNIPROTKB|F2Z4K9 - symbol:UBB "Polyubiquitin-B" species:9... 126 8.5e-08 1
UNIPROTKB|P79781 - symbol:RPS27A "Ubiquitin-40S ribosomal... 126 8.5e-08 1
UNIPROTKB|Q9PST8 - symbol:UbI "Polyubiquitin-B" species:9... 126 8.5e-08 1
UNIPROTKB|P62992 - symbol:RPS27A "Ubiquitin-40S ribosomal... 126 8.5e-08 1
UNIPROTKB|P63048 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 126 8.5e-08 1
UNIPROTKB|F1PEZ4 - symbol:RPS27A "Uncharacterized protein... 126 8.5e-08 1
UNIPROTKB|P63050 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 126 8.5e-08 1
UNIPROTKB|J3QS39 - symbol:UBB "Ubiquitin" species:9606 "H... 126 8.5e-08 1
UNIPROTKB|P62979 - symbol:RPS27A "Ubiquitin-40S ribosomal... 126 8.5e-08 1
UNIPROTKB|P62987 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 126 8.5e-08 1
UNIPROTKB|F2Z5U0 - symbol:RPS27A "Uncharacterized protein... 126 8.5e-08 1
UNIPROTKB|P63053 - symbol:UBA52 "Ubiquitin-60S ribosomal ... 126 8.5e-08 1
MGI|MGI:1925544 - symbol:Rps27a "ribosomal protein S27A" ... 126 8.5e-08 1
UNIPROTKB|P62982 - symbol:Rps27a "Ubiquitin-40S ribosomal... 126 8.5e-08 1
UNIPROTKB|P62986 - symbol:Uba52 "Ubiquitin-60S ribosomal ... 126 8.5e-08 1
ZFIN|ZDB-GENE-030131-10018 - symbol:rps27a "ribosomal pro... 126 8.5e-08 1
ZFIN|ZDB-GENE-051023-7 - symbol:uba52 "ubiquitin A-52 res... 126 8.5e-08 1
FB|FBgn0032725 - symbol:Nedd8 "Nedd8" species:7227 "Droso... 125 1.1e-07 1
GENEDB_PFALCIPARUM|PF13_0346 - symbol:PF13_0346 "ubiquiti... 124 1.4e-07 1
UNIPROTKB|A4QND0 - symbol:ubl4a "Ubiquitin-like protein 4... 124 1.4e-07 1
UNIPROTKB|Q8ID50 - symbol:PF13_0346 "60S ribosomal protei... 124 1.4e-07 1
UNIPROTKB|K7EQ16 - symbol:RAD23A "UV excision repair prot... 123 1.8e-07 1
UNIPROTKB|I3LET0 - symbol:NEDD8 "Uncharacterized protein"... 121 3.1e-07 1
TAIR|locus:2197525 - symbol:RUB1 "AT1G31340" species:3702... 120 4.0e-07 1
TAIR|locus:505006295 - symbol:UBQ7 "AT2G35635" species:37... 120 4.0e-07 1
TAIR|locus:2028005 - symbol:AT1G23410 species:3702 "Arabi... 120 4.0e-07 1
TAIR|locus:2053496 - symbol:UBQ2 "ubiquitin extension pro... 120 4.0e-07 1
TAIR|locus:2041459 - symbol:UBQ6 "ubiquitin 6" species:37... 120 4.0e-07 1
TAIR|locus:2079924 - symbol:UBQ1 "ubiquitin extension pro... 120 4.0e-07 1
TAIR|locus:2098003 - symbol:UBQ5 "ubiquitin 5" species:37... 120 4.0e-07 1
WB|WBGene00003587 - symbol:ned-8 species:6239 "Caenorhabd... 119 5.2e-07 1
UNIPROTKB|Q93725 - symbol:ned-8 "NEDD8" species:6239 "Cae... 119 5.2e-07 1
UNIPROTKB|F5GZ39 - symbol:UBC "Polyubiquitin-C" species:9... 118 6.7e-07 1
UNIPROTKB|Q0D261 - symbol:ubl4a "Ubiquitin-like protein 4... 118 6.7e-07 1
POMBASE|SPAC11G7.04 - symbol:ubi1 "ribosomal-ubiquitin fu... 118 6.7e-07 1
POMBASE|SPAC1805.12c - symbol:uep1 "ribosomal-ubiquitin f... 118 6.7e-07 1
POMBASE|SPAC589.10c - symbol:SPAC589.10c "ribosomal-ubiqu... 118 6.7e-07 1
POMBASE|SPAC6G10.11c - symbol:ubi3 "ribosomal-ubiquitin f... 118 6.7e-07 1
SGD|S000001410 - symbol:RPL40A "Ubiquitin-ribosomal 60S s... 118 6.7e-07 1
SGD|S000001802 - symbol:RPL40B "Ubiquitin-ribosomal 60S s... 118 6.7e-07 1
SGD|S000004157 - symbol:RPS31 "Fusion protein cleaved to ... 118 6.7e-07 1
WB|WBGene00006728 - symbol:ubq-2 species:6239 "Caenorhabd... 118 6.7e-07 1
ASPGD|ASPL0000072359 - symbol:ubi1 species:162425 "Emeric... 117 8.7e-07 1
TAIR|locus:2014440 - symbol:AT1G53930 "AT1G53930" species... 117 8.7e-07 1
UNIPROTKB|J3QKN0 - symbol:UBB "Ubiquitin" species:9606 "H... 126 3.0e-06 1
DICTYBASE|DDB_G0280755 - symbol:ubqB "ubiquitin/ribosomal... 112 3.1e-06 1
UNIPROTKB|P0CG47 - symbol:UBB "Polyubiquitin-B" species:9... 126 4.9e-06 1
UNIPROTKB|A7U5U2 - symbol:UBB "Uncharacterized protein" s... 126 4.9e-06 1
WARNING: Descriptions of 79 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2200522 [details] [associations]
symbol:RAD23A "RADIATION SENSITIVE23A" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0070628
"proteasome binding" evidence=IDA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043161 GO:GO:0003684
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0070628
EMBL:AC006341 InterPro:IPR019955 PROSITE:PS50053 EMBL:AC010924
GO:GO:0043130 SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272
KO:K10839 InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 HOGENOM:HOG000172162 TIGRFAMs:TIGR00601
EMBL:AB109195 IPI:IPI00541487 IPI:IPI00651117 PIR:G86296 PIR:H86296
RefSeq:NP_173070.1 UniGene:At.22124 ProteinModelPortal:Q84L32
SMR:Q84L32 IntAct:Q84L32 PaxDb:Q84L32 PRIDE:Q84L32
EnsemblPlants:AT1G16190.1 GeneID:838188 KEGG:ath:AT1G16190
GeneFarm:4551 TAIR:At1g16190 InParanoid:Q84L32 OMA:HSADFED
PhylomeDB:Q84L32 ProtClustDB:CLSN2682159 Genevestigator:Q84L32
GermOnline:AT1G16190 Uniprot:Q84L32
Length = 368
Score = 683 (245.5 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 144/260 (55%), Positives = 161/260 (61%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDETTL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
+NKV+E+GFLVVMLSKSKT SAG
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVPASNST 120
Query: 121 XXXXXXXXXXXXXXXXXDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA 180
DTYGQAAS LV+G+ +EQ +QQIM+MGGG+WDKETVTRAL+AA
Sbjct: 121 PVQEQPTAQS-------DTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAA 173
Query: 181 YNNPERAVDYLYSGIPETAEVAVPVAHFPXXXXXXXXXXXXXPVSGVPNSSPLNMFPQET 240
YNNPERAVDYLYSGIPET V +P + P SG PNSSPL++FPQE
Sbjct: 174 YNNPERAVDYLYSGIPET--VTIPATNL--SGVGSGRELTAPPPSGGPNSSPLDLFPQEA 229
Query: 241 XXXXXXXXXXXXDFLRNNQQ 260
+FLR N Q
Sbjct: 230 VSDAAGGDLGTLEFLRGNDQ 249
Score = 323 (118.8 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 59/78 (75%), Positives = 73/78 (93%)
Query: 260 QLINEPVDGSEGDM--FDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDR 317
QL+NEP +GS+GD+ FDQP+Q+MPH++NVTP EQE+I+RLEAMGFDRA+VIEAFL+CDR
Sbjct: 291 QLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDR 350
Query: 318 NEELAANYLLENAGDFED 335
NEELAANYLLE++ DFED
Sbjct: 351 NEELAANYLLEHSADFED 368
>TAIR|locus:2076944 [details] [associations]
symbol:RAD23C "RADIATION SENSITIVE23C" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0070628 "proteasome binding" evidence=IDA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
EMBL:AC021640 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043161
GO:GO:0003684 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0070628 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0043130
SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272 KO:K10839
InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 HOGENOM:HOG000172162 TIGRFAMs:TIGR00601
OMA:TAREDKS EMBL:AB109196 EMBL:AB109197 EMBL:AY039562 EMBL:AY113034
IPI:IPI00547374 IPI:IPI00547984 RefSeq:NP_186903.1 UniGene:At.21477
ProteinModelPortal:Q84L31 SMR:Q84L31 IntAct:Q84L31 PaxDb:Q84L31
PRIDE:Q84L31 EnsemblPlants:AT3G02540.1 GeneID:821195
KEGG:ath:AT3G02540 GeneFarm:4552 TAIR:At3g02540 InParanoid:Q84L31
PhylomeDB:Q84L31 ProtClustDB:CLSN2915719 Genevestigator:Q84L31
Uniprot:Q84L31
Length = 419
Score = 330 (121.2 bits), Expect = 9.2e-80, Sum P(3) = 9.2e-80
Identities = 71/129 (55%), Positives = 84/129 (65%)
Query: 138 DTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPE 197
D YGQAASNL AG++LE TIQQI+DMGGGTWD+ETV AL+AA+NNPERAV+YLY+GIPE
Sbjct: 172 DVYGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPE 231
Query: 198 TAEVAVPVAHFPXXXX------XXXXXXXXXPVSGVPNSSPLNMFPQETXXXXXXXXXXX 251
AEV PVA P P SG PN++PL++FPQ
Sbjct: 232 QAEVP-PVARPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGAGT 289
Query: 252 XDFLRNNQQ 260
DFLRN+QQ
Sbjct: 290 LDFLRNSQQ 298
Score = 279 (103.3 bits), Expect = 9.2e-80, Sum P(3) = 9.2e-80
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+ VKTLKG+HFEI V+P D+V+ VKKNIE VQG D YP +Q+LIH GKVLKDETT+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGSA 83
+NKV+E+ F+V+M++KSK +A
Sbjct: 61 ENKVAENSFIVIMMNKSKPASAA 83
Score = 224 (83.9 bits), Expect = 9.2e-80, Sum P(3) = 9.2e-80
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 253 DFLRNNQQLINEPVDGS--EGDMFDQPEQDMPH--AINVTPAEQEAIQRLEAMGFDRALV 308
DFLR LINEPV+G G++ Q MP AI VT E+EAI+RLEAMGF+RALV
Sbjct: 337 DFLR----LINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALV 392
Query: 309 IEAFLACDRNEELAANYLLENAGDFED 335
+E F AC++NEELAANYLL++ +FE+
Sbjct: 393 LEVFFACNKNEELAANYLLDHMHEFEE 419
Score = 69 (29.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMG---FDRALVIEAFLACDRNEEL 321
PV GS+GD++ Q ++ N+ + IQ++ MG +DR V+ A A N E
Sbjct: 166 PV-GSQGDVYGQAASNLAAGSNL----ESTIQQILDMGGGTWDRETVVLALRAAFNNPER 220
Query: 322 AANYL 326
A YL
Sbjct: 221 AVEYL 225
>TAIR|locus:2177376 [details] [associations]
symbol:RAD23D "RADIATION SENSITIVE23D" species:3702
"Arabidopsis thaliana" [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA;ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0070628
"proteasome binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007067 "mitosis" evidence=RCA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 Prosite:PS00299
GO:GO:0005829 GO:GO:0005634 EMBL:AB005248 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043161 GO:GO:0003684 GO:GO:0009409
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0070628
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0043130 SUPFAM:SSF46934
GO:GO:0006289 eggNOG:COG5272 KO:K10839 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
HOGENOM:HOG000172162 TIGRFAMs:TIGR00601 OMA:EKGFIVC EMBL:AB109198
EMBL:AB109199 EMBL:AY037181 EMBL:AY058196 EMBL:AY081835
EMBL:AY087564 IPI:IPI00539559 IPI:IPI00544733 RefSeq:NP_198663.1
UniGene:At.25434 ProteinModelPortal:Q84L30 SMR:Q84L30 IntAct:Q84L30
STRING:Q84L30 PaxDb:Q84L30 PRIDE:Q84L30 EnsemblPlants:AT5G38470.1
GeneID:833835 KEGG:ath:AT5G38470 GeneFarm:4553 TAIR:At5g38470
InParanoid:Q84L30 PhylomeDB:Q84L30 ProtClustDB:CLSN2916638
Genevestigator:Q84L30 GermOnline:AT5G38470 Uniprot:Q84L30
Length = 378
Score = 522 (188.8 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 117/267 (43%), Positives = 144/267 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+ VKTL GS+FEI V+P+D V VK IE V+G + YP +Q+LIH GKVLKDETTL
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59
Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
+N V E+ F+V+MLSK+K A
Sbjct: 60 ENNVVENSFIVIMLSKTK----ASPSGASTASAPAPSATQPQTVATPQVSAPTASVPVPT 115
Query: 121 XXXXXXXXXXXXXXXXXDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA 180
D YGQAASNLVAG LE T+QQI+DMGGG+WD++TV RAL+AA
Sbjct: 116 SGTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAA 175
Query: 181 YNNPERAVDYLYSGIPETAEVAVPVAHFPXXXXXXXX-----XXXXXPVS--GVPNSSPL 233
+NNPERAV+YLYSGIP AE+ PVA P P + G PN++PL
Sbjct: 176 FNNPERAVEYLYSGIPAQAEIP-PVAQAPATGEQAANPLAQPQQAAAPAAATGGPNANPL 234
Query: 234 NMFPQETXXXXXXXXXXXXDFLRNNQQ 260
N+FPQ DFLRN+QQ
Sbjct: 235 NLFPQGMPAADAGAGAGNLDFLRNSQQ 261
Score = 252 (93.8 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 52/83 (62%), Positives = 64/83 (77%)
Query: 253 DFLRNNQQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAF 312
DFLR LINEPV+G E M +Q E MP A+ VTP E+EAI+RLE MGFDRA+V+E F
Sbjct: 300 DFLR----LINEPVEGEENVM-EQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVF 354
Query: 313 LACDRNEELAANYLLENAGDFED 335
AC++NEELAANYLL++ +FED
Sbjct: 355 FACNKNEELAANYLLDHMHEFED 377
>RGD|1562958 [details] [associations]
symbol:Rad23b "RAD23 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0000715 "nucleotide-excision repair, DNA damage recognition"
evidence=IEA;ISO] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032434
"regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0071942 "XPC complex" evidence=ISO;ISS] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
RGD:1562958 Prosite:PS00299 GO:GO:0005737 GO:GO:0043161
GO:GO:0003684 GO:GO:0007283 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 GO:GO:0000502 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 eggNOG:COG5272 GO:GO:0071942 GO:GO:0032434
KO:K10839 GO:GO:0000715 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
HOGENOM:HOG000172162 TIGRFAMs:TIGR00601 HOVERGEN:HBG055042
OrthoDB:EOG4M399F CTD:5887 OMA:NDTIMAV EMBL:BC070960 EMBL:BC090351
EMBL:BC098674 EMBL:BC111406 IPI:IPI00210495 RefSeq:NP_001020446.1
UniGene:Rn.67042 HSSP:P54728 ProteinModelPortal:Q4KMA2 SMR:Q4KMA2
IntAct:Q4KMA2 STRING:Q4KMA2 PhosphoSite:Q4KMA2 PRIDE:Q4KMA2
Ensembl:ENSRNOT00000021629 GeneID:298012 KEGG:rno:298012
UCSC:RGD:1562958 InParanoid:Q4KMA2 NextBio:642963
Genevestigator:Q4KMA2 Uniprot:Q4KMA2
Length = 415
Score = 189 (71.6 bits), Expect = 2.2e-39, Sum P(3) = 2.2e-39
Identities = 37/83 (44%), Positives = 57/83 (68%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGSA 83
+ K+ E F+VVM++K K + SA
Sbjct: 61 EYKIDEKNFVVVMVTKPKAVTSA 83
Score = 150 (57.9 bits), Expect = 2.2e-39, Sum P(3) = 2.2e-39
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 285 INVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 335
I VTP E+EAI+RL+A+GF LVI+A+ AC++NE LAAN+LL+ D ED
Sbjct: 366 IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFD-ED 415
Score = 127 (49.8 bits), Expect = 2.2e-39, Sum P(3) = 2.2e-39
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ A S LV G E + +IM MG +++E V AL+A++NNP+RAV+YL GIP
Sbjct: 177 FEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDR 233
Query: 200 E 200
E
Sbjct: 234 E 234
Score = 69 (29.3 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAAN 324
P D S ++F+ D A+ + + + + +MG++R VI A A N + A
Sbjct: 168 PGDSSRSNLFE----DATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVE 223
Query: 325 YLLENA-GDFE 334
YLL GD E
Sbjct: 224 YLLMGIPGDRE 234
>ZFIN|ZDB-GENE-040426-1487 [details] [associations]
symbol:rad23b "RAD23 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 ZFIN:ZDB-GENE-040426-1487
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 GO:GO:0006289 HSSP:Q862M4 eggNOG:COG5272 KO:K10839
InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 HOGENOM:HOG000172162 TIGRFAMs:TIGR00601
HOVERGEN:HBG055042 CTD:5887 EMBL:BC056578 IPI:IPI00482453
RefSeq:NP_956858.1 UniGene:Dr.107756 ProteinModelPortal:Q6PHE9
SMR:Q6PHE9 PRIDE:Q6PHE9 GeneID:393536 KEGG:dre:393536
InParanoid:Q6PHE9 NextBio:20814557 ArrayExpress:Q6PHE9 Bgee:Q6PHE9
Uniprot:Q6PHE9
Length = 382
Score = 179 (68.1 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 34/79 (43%), Positives = 55/79 (69%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ F+I + +TV A+K+ IE+ +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MQITLKTLQQQTFKIDIDAEETVKALKEKIENEKGKDGFPVAGQKLIYAGKILSDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKT 79
+ K+ E F+VVM++K K+
Sbjct: 61 EYKIDEKNFVVVMVTKPKS 79
Score = 166 (63.5 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 38/80 (47%), Positives = 52/80 (65%)
Query: 260 QLINEPVD--GSEGDMFDQPEQDMPHA--INVTPAEQEAIQRLEAMGFDRALVIEAFLAC 315
Q++NEPV G G E H I VTP E+EAI+RL+A+GF LVI+A+ AC
Sbjct: 304 QMLNEPVQEAGQGGGAGGVAEAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFAC 363
Query: 316 DRNEELAANYLLENAGDFED 335
++NE LAAN+LL+ +F+D
Sbjct: 364 EKNENLAANFLLQQ--NFDD 381
Score = 142 (55.0 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ +A S LV G E + +IM MG ++++ V AL+A++NNP+RAV+YL +GIP
Sbjct: 148 FEEATSALVTGQSYENMVTEIMLMG---YERDRVVAALRASFNNPDRAVEYLLTGIPAEG 204
Query: 200 EVAVPVAHFPXXXXXXXXXXXXXPVSGVPNSSPLNMFPQETXXXXXXXXXXXXDFLRNNQ 259
E +V A P SSP + P + +FLRN
Sbjct: 205 EGSVVGAVDAVSPSGSTPASAPAPAISTGLSSPSSTAPAQPSSASGANPL---EFLRNQP 261
Query: 260 QLI 262
Q +
Sbjct: 262 QFL 264
Score = 51 (23.0 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 292 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
+ + + MG++R V+ A A N + A YLL
Sbjct: 162 ENMVTEIMLMGYERDRVVAALRASFNNPDRAVEYLL 197
Score = 41 (19.5 bits), Expect = 7.1e-28, Sum P(3) = 7.1e-28
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 196 PETAEVAVPVAHFPXXXXXXXXXXXXXPVSGVPNSSPLNMFPQE 239
P++A P P S P+++P++ P E
Sbjct: 77 PKSASAPAP----PSSSSSSSSSSTTASASAAPSAAPVSESPSE 116
>MGI|MGI:105128 [details] [associations]
symbol:Rad23b "RAD23b homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0000715 "nucleotide-excision repair, DNA damage recognition"
evidence=ISO] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0031593 "polyubiquitin binding" evidence=ISO] [GO:0032434
"regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0071942 "XPC complex"
evidence=ISO] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
MGI:MGI:105128 Prosite:PS00299 GO:GO:0005737 GO:GO:0043161
GO:GO:0003684 GO:GO:0007283 GO:GO:0006974 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0000502 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 eggNOG:COG5272 GO:GO:0071942
GO:GO:0032434 KO:K10839 GO:GO:0000715 InterPro:IPR006636
SMART:SM00727 PDB:2F4M PDB:2F4O PDBsum:2F4M PDBsum:2F4O
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
HOGENOM:HOG000172162 TIGRFAMs:TIGR00601 HOVERGEN:HBG055042
OrthoDB:EOG4M399F CTD:5887 ChiTaRS:RAD23B EMBL:X92411 EMBL:AK150089
EMBL:AK160880 EMBL:AK160890 EMBL:AK160973 EMBL:AL683890
EMBL:BC027747 IPI:IPI00108774 RefSeq:NP_033037.2 UniGene:Mm.196846
ProteinModelPortal:P54728 SMR:P54728 IntAct:P54728 STRING:P54728
PhosphoSite:P54728 PaxDb:P54728 PRIDE:P54728
Ensembl:ENSMUST00000030134 GeneID:19359 KEGG:mmu:19359
InParanoid:Q3TUA4 OMA:EKGFIVC EvolutionaryTrace:P54728
NextBio:296413 Bgee:P54728 CleanEx:MM_RAD23B Genevestigator:P54728
GermOnline:ENSMUSG00000028426 Uniprot:P54728
Length = 416
Score = 186 (70.5 bits), Expect = 3.0e-37, Sum P(3) = 3.0e-37
Identities = 36/83 (43%), Positives = 57/83 (68%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGSA 83
+ K+ E F+VVM++K K + +A
Sbjct: 61 EYKIDEKNFVVVMVTKPKAVTTA 83
Score = 150 (57.9 bits), Expect = 3.0e-37, Sum P(3) = 3.0e-37
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 285 INVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 335
I VTP E+EAI+RL+A+GF LVI+A+ AC++NE LAAN+LL+ D ED
Sbjct: 367 IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFD-ED 416
Score = 127 (49.8 bits), Expect = 3.0e-37, Sum P(3) = 3.0e-37
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ A S LV G E + +IM MG +++E V AL+A++NNP+RAV+YL GIP
Sbjct: 177 FEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDR 233
Query: 200 E 200
E
Sbjct: 234 E 234
Score = 69 (29.3 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAAN 324
P D S ++F+ D A+ + + + + +MG++R VI A A N + A
Sbjct: 168 PGDSSRSNLFE----DATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVE 223
Query: 325 YLLENA-GDFE 334
YLL GD E
Sbjct: 224 YLLMGIPGDRE 234
>UNIPROTKB|F1SP32 [details] [associations]
symbol:RAD23B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071942 "XPC complex" evidence=IEA] [GO:0032434
"regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000715
"nucleotide-excision repair, DNA damage recognition" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005737 GO:GO:0043161 GO:GO:0003684 GO:GO:0007283
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0071942 GO:GO:0032434
KO:K10839 GO:GO:0000715 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
TIGRFAMs:TIGR00601 CTD:5887 OMA:NDTIMAV EMBL:CU463059
RefSeq:XP_001927901.1 ProteinModelPortal:F1SP32
Ensembl:ENSSSCT00000005980 GeneID:100153668 KEGG:ssc:100153668
Uniprot:F1SP32
Length = 408
Score = 184 (69.8 bits), Expect = 4.3e-37, Sum P(3) = 4.3e-37
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MQITLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTL 80
+ K+ E F+VVM++K K +
Sbjct: 61 EYKIDEKNFVVVMVTKPKAV 80
Score = 157 (60.3 bits), Expect = 4.3e-37, Sum P(3) = 4.3e-37
Identities = 40/85 (47%), Positives = 53/85 (62%)
Query: 260 QLINEPVD--GSEGD-----MFDQPEQDMPHA--INVTPAEQEAIQRLEAMGFDRALVIE 310
Q++NEPV GS+G E H I VTP E+EAI+RL+A+GF LVI+
Sbjct: 325 QMLNEPVQEAGSQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQ 384
Query: 311 AFLACDRNEELAANYLLENAGDFED 335
A+ AC++NE LAAN+LL+ D ED
Sbjct: 385 AYFACEKNENLAANFLLQQNFD-ED 408
Score = 127 (49.8 bits), Expect = 4.3e-37, Sum P(3) = 4.3e-37
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ A S LV G E + +IM MG +++E V AL+A++NNP+RAV+YL GIP
Sbjct: 177 FEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDR 233
Query: 200 E 200
E
Sbjct: 234 E 234
Score = 65 (27.9 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 267 DGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
D S ++F+ D A+ + + + + +MG++R VI A A N + A YL
Sbjct: 170 DSSRSNLFE----DATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYL 225
Query: 327 LENA-GDFE 334
L GD E
Sbjct: 226 LMGIPGDRE 234
>UNIPROTKB|P54727 [details] [associations]
symbol:RAD23B "UV excision repair protein RAD23 homolog B"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071942 "XPC
complex" evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=IDA;TAS] [GO:0000715 "nucleotide-excision repair, DNA
damage recognition" evidence=IDA;TAS] [GO:0031593 "polyubiquitin
binding" evidence=IDA] [GO:0032434 "regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=TAS] [GO:0000718
"nucleotide-excision repair, DNA damage removal" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_216 InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
Prosite:PS00299 GO:GO:0005737 GO:GO:0005654 GO:GO:0043161
GO:GO:0003684 GO:GO:0007283 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 EMBL:CH471105 GO:GO:0003697 GO:GO:0000502
GO:GO:0031593 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 GO:GO:0000718 GO:GO:0071942 GO:GO:0032434 KO:K10839
GO:GO:0000715 InterPro:IPR006636 SMART:SM00727 PDB:1UEL PDBsum:1UEL
Gene3D:1.10.10.540 SUPFAM:SSF101238 HOGENOM:HOG000172162
TIGRFAMs:TIGR00601 HOVERGEN:HBG055042 OrthoDB:EOG4M399F CTD:5887
OMA:NDTIMAV EMBL:D21090 EMBL:AY313777 EMBL:AY165178 EMBL:AK125226
EMBL:AL137852 EMBL:BC020973 IPI:IPI00008223 PIR:S44346
RefSeq:NP_002865.1 UniGene:Hs.521640 PDB:1P1A PDB:1PVE PDBsum:1P1A
PDBsum:1PVE ProteinModelPortal:P54727 SMR:P54727 IntAct:P54727
MINT:MINT-5006025 STRING:P54727 PhosphoSite:P54727 DMDM:1709985
OGP:P54727 PaxDb:P54727 PeptideAtlas:P54727 PRIDE:P54727 DNASU:5887
Ensembl:ENST00000358015 Ensembl:ENST00000416373 GeneID:5887
KEGG:hsa:5887 UCSC:uc004bde.3 GeneCards:GC09P110045 HGNC:HGNC:9813
HPA:CAB033868 HPA:HPA029718 HPA:HPA029720 MIM:600062
neXtProt:NX_P54727 PharmGKB:PA34173 InParanoid:P54727
PhylomeDB:P54727 ChiTaRS:RAD23B EvolutionaryTrace:P54727
GenomeRNAi:5887 NextBio:22892 PMAP-CutDB:P54727 ArrayExpress:P54727
Bgee:P54727 CleanEx:HS_RAD23B Genevestigator:P54727
GermOnline:ENSG00000119318 Uniprot:P54727
Length = 409
Score = 184 (69.8 bits), Expect = 5.5e-37, Sum P(3) = 5.5e-37
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGS 82
+ K+ E F+VVM++K K + +
Sbjct: 61 EYKIDEKNFVVVMVTKPKAVST 82
Score = 156 (60.0 bits), Expect = 5.5e-37, Sum P(3) = 5.5e-37
Identities = 39/85 (45%), Positives = 51/85 (60%)
Query: 260 QLINEPVD-------GSEGDMFDQPEQDMPHA--INVTPAEQEAIQRLEAMGFDRALVIE 310
Q++NEPV G G E H I VTP E+EAI+RL+A+GF LVI+
Sbjct: 326 QMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQ 385
Query: 311 AFLACDRNEELAANYLLENAGDFED 335
A+ AC++NE LAAN+LL+ D ED
Sbjct: 386 AYFACEKNENLAANFLLQQNFD-ED 409
Score = 127 (49.8 bits), Expect = 5.5e-37, Sum P(3) = 5.5e-37
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ A S LV G E + +IM MG +++E V AL+A++NNP+RAV+YL GIP
Sbjct: 177 FEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDR 233
Query: 200 E 200
E
Sbjct: 234 E 234
Score = 65 (27.9 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 267 DGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
D S ++F+ D A+ + + + + +MG++R VI A A N + A YL
Sbjct: 170 DSSRSNLFE----DATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYL 225
Query: 327 LENA-GDFE 334
L GD E
Sbjct: 226 LMGIPGDRE 234
>UNIPROTKB|A3KMV2 [details] [associations]
symbol:RAD23A "UV excision repair protein RAD23 homolog A"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0045070 "positive regulation of viral genome replication"
evidence=IEA] [GO:0032434 "regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 GO:GO:0000502 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272 GO:GO:0045070
GO:GO:0032434 KO:K10839 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
HOGENOM:HOG000172162 TIGRFAMs:TIGR00601 EMBL:BC133282
IPI:IPI00714456 RefSeq:NP_001076083.1 UniGene:Bt.23124
ProteinModelPortal:A3KMV2 SMR:A3KMV2 STRING:A3KMV2 PRIDE:A3KMV2
Ensembl:ENSBTAT00000020113 GeneID:540564 KEGG:bta:540564 CTD:5886
HOVERGEN:HBG055042 InParanoid:A3KMV2 OMA:TAREDKS OrthoDB:EOG4M399F
NextBio:20878705 ArrayExpress:A3KMV2 Uniprot:A3KMV2
Length = 362
Score = 175 (66.7 bits), Expect = 9.4e-37, Sum P(3) = 9.4e-37
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + D
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
Query: 63 KVSEDGFLVVMLSKSKT 79
++ E F+VVM++K+KT
Sbjct: 65 RIDEKNFVVVMVTKAKT 81
Score = 159 (61.0 bits), Expect = 9.4e-37, Sum P(3) = 9.4e-37
Identities = 39/83 (46%), Positives = 57/83 (68%)
Query: 260 QLINEP----VDGS--EGDMFDQPEQ-DMPHAINVTPAEQEAIQRLEAMGFDRALVIEAF 312
Q++NEP VD S EG++ E+ + I VTP E+EAI+RL+A+GF +LVI+A+
Sbjct: 281 QMLNEPPGELVDISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAY 340
Query: 313 LACDRNEELAANYLLENAGDFED 335
AC++NE LAAN+LL +F+D
Sbjct: 341 FACEKNENLAANFLLSQ--NFDD 361
Score = 140 (54.3 bits), Expect = 9.4e-37, Sum P(3) = 9.4e-37
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 61 (26.5 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 278 EQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
E+D + VT +E E + + +MG++R V+ A A N A YLL
Sbjct: 150 EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLL 199
>UNIPROTKB|F1PTL1 [details] [associations]
symbol:RAD23A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045070 "positive regulation of viral genome
replication" evidence=IEA] [GO:0032434 "regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 GO:GO:0005634 GO:GO:0043161
GO:GO:0003684 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0006289
GO:GO:0045070 GO:GO:0032434 KO:K10839 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
GeneTree:ENSGT00390000012078 TIGRFAMs:TIGR00601 CTD:5886
OMA:TAREDKS EMBL:AAEX03012401 RefSeq:XP_542038.2
ProteinModelPortal:F1PTL1 Ensembl:ENSCAFT00000027066 GeneID:484922
KEGG:cfa:484922 Uniprot:F1PTL1
Length = 362
Score = 175 (66.7 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + D
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
Query: 63 KVSEDGFLVVMLSKSKT 79
++ E F+VVM++K+KT
Sbjct: 65 RIDEKNFVVVMVTKAKT 81
Score = 158 (60.7 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 260 QLINEPVDGSEGDMFD-QPE-----QDMPHA--INVTPAEQEAIQRLEAMGFDRALVIEA 311
Q++NEP G D+ D + E ++ P I VTP E+EAI+RL+A+GF +LVI+A
Sbjct: 281 QMLNEP-PGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQA 339
Query: 312 FLACDRNEELAANYLLENAGDFED 335
+ AC++NE LAAN+LL +F+D
Sbjct: 340 YFACEKNENLAANFLLSQ--NFDD 361
Score = 140 (54.3 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 63 (27.2 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 142 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV 195
Query: 324 NYLL 327
YLL
Sbjct: 196 EYLL 199
>ZFIN|ZDB-GENE-051113-160 [details] [associations]
symbol:zgc:123349 "rad23ab" species:7955 "Danio
rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 ZFIN:ZDB-GENE-051113-160 GO:GO:0005634
GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0006289 KO:K10839 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 TIGRFAMs:TIGR00601
HOVERGEN:HBG055042 EMBL:BC108000 IPI:IPI00619183
RefSeq:NP_001032776.1 UniGene:Dr.84850 ProteinModelPortal:Q32PS7
SMR:Q32PS7 STRING:Q32PS7 PRIDE:Q32PS7 GeneID:562839 KEGG:dre:562839
InParanoid:Q32PS7 NextBio:20884614 ArrayExpress:Q32PS7 Bgee:Q32PS7
Uniprot:Q32PS7
Length = 404
Score = 174 (66.3 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 39/87 (44%), Positives = 57/87 (65%)
Query: 256 RNNQQLINEPVDGSEG--DMFDQPEQDMPHA-----INVTPAEQEAIQRLEAMGFDRALV 308
R+N QL+ + E M ++PE + P A I VTP E+EAI+RL+A+GF LV
Sbjct: 319 RDNPQLLQQITQHQERFVQMLNEPEAEAPAAPQTNYIQVTPQEKEAIERLKALGFPEGLV 378
Query: 309 IEAFLACDRNEELAANYLLENAGDFED 335
I+A+ AC++NE LAAN+LL+ +F+D
Sbjct: 379 IQAYFACEKNENLAANFLLQQ--NFDD 403
Score = 165 (63.1 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 32/82 (39%), Positives = 54/82 (65%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
+ +T+KTL+ F++++ TV A+K+ IE+ +GKD +P Q LI+ GK+L D+ L
Sbjct: 2 LTITLKTLQQQTFKVQIDEELTVKALKEKIEEEKGKDGFPAVGQKLIYAGKILNDDIPLK 61
Query: 61 DNKVSEDGFLVVMLSKSKTLGS 82
+ K+ E F+VVM++K K+ S
Sbjct: 62 EYKIDEKNFVVVMVTKPKSAAS 83
Score = 132 (51.5 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G E + +IM MG +++E V AL+A++NNP+RAV+YL +GIP +E
Sbjct: 189 AASILVTGQAYENLVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLTGIPAESE 243
Score = 59 (25.8 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 269 SEGDMFDQPEQ-DMPHAINVT-PAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
SE + D+ + +I VT A + + + +MG++R VI A A N + A YL
Sbjct: 175 SEASLTDELSLLEAAASILVTGQAYENLVTEIMSMGYEREQVIAALRASFNNPDRAVEYL 234
Query: 327 L 327
L
Sbjct: 235 L 235
Score = 37 (18.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 262 INEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLE 299
I+ PV D E P + PA +E IQ E
Sbjct: 131 IDPPVTAPPAASEDTVETTEPVSATPAPAVEEEIQGQE 168
>UNIPROTKB|F1SD96 [details] [associations]
symbol:RAD23A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045070 "positive regulation of viral genome
replication" evidence=IEA] [GO:0032434 "regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 GO:GO:0005634 GO:GO:0043161
GO:GO:0003684 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0006289
EMBL:CU463133 GO:GO:0045070 GO:GO:0032434 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
GeneTree:ENSGT00390000012078 TIGRFAMs:TIGR00601 OMA:TAREDKS
Ensembl:ENSSSCT00000015021 Uniprot:F1SD96
Length = 380
Score = 175 (66.7 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 32/77 (41%), Positives = 54/77 (70%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + D
Sbjct: 22 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 81
Query: 63 KVSEDGFLVVMLSKSKT 79
++ E F+VVM++K+KT
Sbjct: 82 RIDEKNFVVVMVTKAKT 98
Score = 158 (60.7 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 260 QLINEPVDGSEGDMFD-QPE-----QDMPHA--INVTPAEQEAIQRLEAMGFDRALVIEA 311
Q++NEP G D+ D + E ++ P I VTP E+EAI+RL+A+GF +LVI+A
Sbjct: 299 QMLNEP-PGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQA 357
Query: 312 FLACDRNEELAANYLLENAGDFED 335
+ AC++NE LAAN+LL +F+D
Sbjct: 358 YFACEKNENLAANFLLSQ--NFDD 379
Score = 134 (52.2 bits), Expect = 7.4e-36, Sum P(3) = 7.4e-36
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +I MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 170 AASTLVTGSEYETMLTEITSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 224
Score = 64 (27.6 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 159 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEITSMGYERERVVAALRASYNNPHRAV 212
Query: 324 NYLL 327
YLL
Sbjct: 213 EYLL 216
>UNIPROTKB|E2R4A5 [details] [associations]
symbol:RAD23B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071942 "XPC complex" evidence=IEA]
[GO:0032434 "regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000715
"nucleotide-excision repair, DNA damage recognition" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005737 GO:GO:0043161 GO:GO:0003684 GO:GO:0007283
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0071942 GO:GO:0032434
KO:K10839 GO:GO:0000715 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
TIGRFAMs:TIGR00601 CTD:5887 OMA:NDTIMAV EMBL:AAEX03008026
EMBL:AAEX03008027 RefSeq:XP_538778.1 ProteinModelPortal:E2R4A5
Ensembl:ENSCAFT00000004463 GeneID:481656 KEGG:cfa:481656
Uniprot:E2R4A5
Length = 406
Score = 180 (68.4 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M +T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MLVTLKTLQQQTFKIDIDPDETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTL 80
+ K+ E F+VVM++K K +
Sbjct: 61 EYKIDEKNFVVVMVTKPKAV 80
Score = 156 (60.0 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 39/85 (45%), Positives = 51/85 (60%)
Query: 260 QLINEPVD-------GSEGDMFDQPEQDMPHA--INVTPAEQEAIQRLEAMGFDRALVIE 310
Q++NEPV G G E H I VTP E+EAI+RL+A+GF LVI+
Sbjct: 323 QMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQ 382
Query: 311 AFLACDRNEELAANYLLENAGDFED 335
A+ AC++NE LAAN+LL+ D ED
Sbjct: 383 AYFACEKNENLAANFLLQQNFD-ED 406
Score = 127 (49.8 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ A S LV G E + +IM MG +++E V AL+A++NNP+RAV+YL GIP
Sbjct: 175 FEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDR 231
Query: 200 E 200
E
Sbjct: 232 E 232
Score = 65 (27.9 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 267 DGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
D S ++F+ D A+ + + + + +MG++R VI A A N + A YL
Sbjct: 168 DSSRSNLFE----DATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYL 223
Query: 327 LENA-GDFE 334
L GD E
Sbjct: 224 LMGIPGDRE 232
>UNIPROTKB|P54725 [details] [associations]
symbol:RAD23A "UV excision repair protein RAD23 homolog A"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032434 "regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0045070 "positive regulation of viral genome replication"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0019048 GO:GO:0043161 GO:GO:0003684
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0003697
GO:GO:0000502 GO:GO:0031593 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272 EMBL:AD000092
GO:GO:0045070 GO:GO:0032434 KO:K10839 InterPro:IPR006636
SMART:SM00727 PDB:1P9D PDBsum:1P9D Gene3D:1.10.10.540
SUPFAM:SSF101238 TIGRFAMs:TIGR00601 CTD:5886 HOVERGEN:HBG055042
OMA:TAREDKS OrthoDB:EOG4M399F EMBL:D21235 EMBL:AF549209
EMBL:BC014026 IPI:IPI00008219 PIR:S44443 RefSeq:NP_001257291.1
RefSeq:NP_001257292.1 RefSeq:NP_005044.1 UniGene:Hs.643267 PDB:1DV0
PDB:1F4I PDB:1IFY PDB:1OQY PDB:1P98 PDB:1QZE PDB:1TP4 PDB:1ZO6
PDB:2WYQ PDBsum:1DV0 PDBsum:1F4I PDBsum:1IFY PDBsum:1OQY
PDBsum:1P98 PDBsum:1QZE PDBsum:1TP4 PDBsum:1ZO6 PDBsum:2WYQ
DisProt:DP00156 ProteinModelPortal:P54725 SMR:P54725 IntAct:P54725
MINT:MINT-105454 STRING:P54725 PhosphoSite:P54725 DMDM:1709983
PaxDb:P54725 PeptideAtlas:P54725 PRIDE:P54725 DNASU:5886
Ensembl:ENST00000316856 GeneID:5886 KEGG:hsa:5886 UCSC:uc002mvw.1
GeneCards:GC19P013056 HGNC:HGNC:9812 MIM:600061 neXtProt:NX_P54725
PharmGKB:PA34172 InParanoid:P54725 PhylomeDB:P54725 ChiTaRS:RAD23A
EvolutionaryTrace:P54725 GenomeRNAi:5886 NextBio:22888
PMAP-CutDB:P54725 ArrayExpress:P54725 Bgee:P54725 CleanEx:HS_RAD23A
Genevestigator:P54725 GermOnline:ENSG00000179262 Uniprot:P54725
Length = 363
Score = 170 (64.9 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + D
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
Query: 63 KVSEDGFLVVMLSKSK 78
++ E F+VVM++K+K
Sbjct: 65 RIDEKNFVVVMVTKTK 80
Score = 158 (60.7 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 260 QLINEPVDGSEGDMFD-QPE-----QDMPHA--INVTPAEQEAIQRLEAMGFDRALVIEA 311
Q++NEP G D+ D + E ++ P I VTP E+EAI+RL+A+GF +LVI+A
Sbjct: 282 QMLNEP-PGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQA 340
Query: 312 FLACDRNEELAANYLLENAGDFED 335
+ AC++NE LAAN+LL +F+D
Sbjct: 341 YFACEKNENLAANFLLSQ--NFDD 362
Score = 140 (54.3 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 63 (27.2 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 142 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV 195
Query: 324 NYLL 327
YLL
Sbjct: 196 EYLL 199
>UNIPROTKB|Q29RK4 [details] [associations]
symbol:RAD23B "UV excision repair protein RAD23 homolog B"
species:9913 "Bos taurus" [GO:0071942 "XPC complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0032434 "regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0000715
"nucleotide-excision repair, DNA damage recognition" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 Prosite:PS00299
GO:GO:0005737 GO:GO:0043161 GO:GO:0003684 GO:GO:0007283
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0000502
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 eggNOG:COG5272
GO:GO:0071942 GO:GO:0032434 KO:K10839 GO:GO:0000715
InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 GeneTree:ENSGT00390000012078 HOGENOM:HOG000172162
TIGRFAMs:TIGR00601 HOVERGEN:HBG055042 OrthoDB:EOG4M399F
EMBL:BC114133 IPI:IPI00708797 RefSeq:NP_001039775.1
UniGene:Bt.75268 ProteinModelPortal:Q29RK4 SMR:Q29RK4 STRING:Q29RK4
PRIDE:Q29RK4 Ensembl:ENSBTAT00000002506 GeneID:530189
KEGG:bta:530189 CTD:5887 InParanoid:Q29RK4 OMA:NDTIMAV
NextBio:20875203 ArrayExpress:Q29RK4 Uniprot:Q29RK4
Length = 408
Score = 180 (68.4 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M +T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MLVTLKTLQQQTFKIDIDPDETVRALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTL 80
+ K+ E F+VVM++K K +
Sbjct: 61 EYKIDEKNFVVVMVTKPKAV 80
Score = 154 (59.3 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 39/85 (45%), Positives = 51/85 (60%)
Query: 260 QLINEPVD-------GSEGDMFDQPEQDMPHA--INVTPAEQEAIQRLEAMGFDRALVIE 310
Q++NEPV G G E H I VTP E+EAI+RL+A+GF LVI+
Sbjct: 325 QMLNEPVQEAGGQGGGGGGGSGGIAEAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQ 384
Query: 311 AFLACDRNEELAANYLLENAGDFED 335
A+ AC++NE LAAN+LL+ D ED
Sbjct: 385 AYFACEKNENLAANFLLQQNFD-ED 408
Score = 127 (49.8 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
+ A S LV G E + +IM MG +++E V AL+A++NNP+RAV+YL GIP
Sbjct: 177 FEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDR 233
Query: 200 E 200
E
Sbjct: 234 E 234
Score = 67 (28.6 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 28/121 (23%), Positives = 47/121 (38%)
Query: 223 PVSGVPNSSPLNMFPQETXXXXXXXXXXXXDFLRNNQQLINEPV-------DGSEGDMF- 274
P S P +P+++ P T + ++ + PV D + GD
Sbjct: 115 PASA-PTPTPVSVTPAPTTASSEPAPASAAKQEKPAERPVETPVATTPTSTDSTSGDSSR 173
Query: 275 DQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENA-GDF 333
+D A+ + + + + +MG++R VI A A N + A YLL GD
Sbjct: 174 SNLFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDR 233
Query: 334 E 334
E
Sbjct: 234 E 234
>ZFIN|ZDB-GENE-040808-59 [details] [associations]
symbol:rad23aa "RAD23 homolog Aa (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 ZFIN:ZDB-GENE-040808-59
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272 KO:K10839
InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 HOGENOM:HOG000172162 TIGRFAMs:TIGR00601
HOVERGEN:HBG055042 OrthoDB:EOG4M399F EMBL:BC079526 IPI:IPI00483790
RefSeq:NP_001003739.1 UniGene:Dr.79995 ProteinModelPortal:Q6AXI3
SMR:Q6AXI3 STRING:Q6AXI3 PRIDE:Q6AXI3 GeneID:445284 KEGG:dre:445284
CTD:445284 NextBio:20832031 ArrayExpress:Q6AXI3 Bgee:Q6AXI3
Uniprot:Q6AXI3
Length = 362
Score = 175 (66.7 bits), Expect = 5.5e-35, Sum P(3) = 5.5e-35
Identities = 33/83 (39%), Positives = 58/83 (69%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ +I + TV A+K+ IE +G+D++P Q LI+ GK+L+D+T +
Sbjct: 1 MQITLKTLQQQTIQIDIDDEQTVKALKEKIEAEKGRDSFPVAGQKLIYAGKILQDDTPIK 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGSA 83
+ K+ E F+VVM+SK+K+ G++
Sbjct: 61 EYKIDEKNFVVVMVSKTKSPGTS 83
Score = 157 (60.3 bits), Expect = 5.5e-35, Sum P(3) = 5.5e-35
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 260 QLINEPVDGSEGDMFDQPE-QDM--------PHA-INVTPAEQEAIQRLEAMGFDRALVI 309
Q++N PV EG++ + E D+ P + I VT E+EAI+RL+A+GF ALV+
Sbjct: 278 QMLNAPVGEGEGELGEGGEFADLGAIGDEAAPGSFIQVTQQEKEAIERLKALGFSEALVV 337
Query: 310 EAFLACDRNEELAANYLLENAGDFED 335
+A+ AC++NE LAAN+LL +FED
Sbjct: 338 QAYFACEKNENLAANFLLNQ--NFED 361
Score = 125 (49.1 bits), Expect = 5.5e-35, Sum P(3) = 5.5e-35
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIP 196
A+S LV G + + + IM MG ++++ V AL+A+YNNP RAV+YL +GIP
Sbjct: 151 ASSTLVTGQEYDAMLTNIMSMG---YERDKVVAALKASYNNPHRAVEYLLNGIP 201
Score = 56 (24.8 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 287 VTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
VT E +A + + +MG++R V+ A A N A YLL
Sbjct: 156 VTGQEYDAMLTNIMSMGYERDKVVAALKASYNNPHRAVEYLL 197
>MGI|MGI:105126 [details] [associations]
symbol:Rad23a "RAD23a homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IGI] [GO:0031593
"polyubiquitin binding" evidence=ISO] [GO:0032434 "regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045070 "positive regulation
of viral genome replication" evidence=ISO] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 MGI:MGI:105126 Prosite:PS00299
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 GO:GO:0006974
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0000502
EMBL:CH466525 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0006289 eggNOG:COG5272 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
HOGENOM:HOG000172162 TIGRFAMs:TIGR00601 HOVERGEN:HBG055042
OMA:TAREDKS OrthoDB:EOG4M399F EMBL:X92410 EMBL:BC145372
IPI:IPI00307988 UniGene:Mm.255539 ProteinModelPortal:P54726
SMR:P54726 IntAct:P54726 STRING:P54726 PhosphoSite:P54726
PaxDb:P54726 PRIDE:P54726 Ensembl:ENSMUST00000109761
InParanoid:P54726 Bgee:P54726 CleanEx:MM_RAD23A
Genevestigator:P54726 GermOnline:ENSMUSG00000003813 Uniprot:P54726
Length = 363
Score = 163 (62.4 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + +
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIKEY 64
Query: 63 KVSEDGFLVVMLSKSK 78
+ E F+VVM++K+K
Sbjct: 65 HIDEKNFVVVMVTKAK 80
Score = 158 (60.7 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 260 QLINEPVDGSEGDMFD-QPE-----QDMPHA--INVTPAEQEAIQRLEAMGFDRALVIEA 311
Q++NEP G D+ D + E ++ P I VTP E+EAI+RL+A+GF +LVI+A
Sbjct: 282 QMLNEP-PGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQA 340
Query: 312 FLACDRNEELAANYLLENAGDFED 335
+ AC++NE LAAN+LL +F+D
Sbjct: 341 YFACEKNENLAANFLLSQ--NFDD 362
Score = 140 (54.3 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 63 (27.2 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 142 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV 195
Query: 324 NYLL 327
YLL
Sbjct: 196 EYLL 199
>UNIPROTKB|D4AD39 [details] [associations]
symbol:Rad23a "RAD23a homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 RGD:1309899 GO:GO:0005634
GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 EMBL:CH473972
SUPFAM:SSF46934 GO:GO:0006289 GO:GO:0045070 GO:GO:0032434
InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 TIGRFAMs:TIGR00601 OMA:TAREDKS IPI:IPI00561816
UniGene:Rn.105419 Ensembl:ENSRNOT00000033495 Uniprot:D4AD39
Length = 363
Score = 162 (62.1 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + +
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDIPIKEY 64
Query: 63 KVSEDGFLVVMLSKSK 78
+ E F+VVM++K+K
Sbjct: 65 HIDEKNFVVVMVTKAK 80
Score = 159 (61.0 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 38/85 (44%), Positives = 57/85 (67%)
Query: 260 QLINEP---------VDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIE 310
Q++NEP V+G G + ++ Q M + I VTP E+EAI+RL+A+GF +LVI+
Sbjct: 282 QMLNEPPGELADISDVEGEVGALGEEAPQ-MNY-IQVTPQEKEAIERLKALGFPESLVIQ 339
Query: 311 AFLACDRNEELAANYLLENAGDFED 335
A+ AC++NE LAAN+LL +F+D
Sbjct: 340 AYFACEKNENLAANFLLSQ--NFDD 362
Score = 140 (54.3 bits), Expect = 2.3e-34, Sum P(3) = 2.3e-34
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 63 (27.2 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 142 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV 195
Query: 324 NYLL 327
YLL
Sbjct: 196 EYLL 199
>TAIR|locus:2181362 [details] [associations]
symbol:AT5G16090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 EMBL:CP002688 GO:GO:0043161 GO:GO:0003684
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0006289 KO:K10839
Gene3D:1.10.10.540 IPI:IPI00545275 RefSeq:NP_197113.4
UniGene:At.54861 ProteinModelPortal:F4KCN6 SMR:F4KCN6
EnsemblPlants:AT5G16090.1 GeneID:831466 KEGG:ath:AT5G16090
OMA:KGCLEEM Uniprot:F4KCN6
Length = 171
Score = 204 (76.9 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 39/76 (51%), Positives = 53/76 (69%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+ VKTLKG FEI V+P+D+V VKKNIE V G YP QQ+LIH + L+DETT+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 61 DNKVSEDGFLVVMLSK 76
NKV + + ++++K
Sbjct: 61 ANKVFDKSVIAIIITK 76
Score = 164 (62.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 276 QPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEN 329
QPE+D+ + VT + EAI RLEAMGF+R +V+E FLAC++NE+LAAN+LL++
Sbjct: 117 QPEEDLLQ-LQVTAVDDEAINRLEAMGFERRVVLEVFLACNKNEQLAANFLLDH 169
>UNIPROTKB|K7ESE3 [details] [associations]
symbol:RAD23A "UV excision repair protein RAD23 homolog A"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 TIGRFAMs:TIGR00601 RefSeq:NP_001257292.1
GeneID:5886 HGNC:HGNC:9812 EMBL:AC092069 Ensembl:ENST00000592268
Uniprot:K7ESE3
Length = 308
Score = 170 (64.9 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 31/76 (40%), Positives = 53/76 (69%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + D
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64
Query: 63 KVSEDGFLVVMLSKSK 78
++ E F+VVM++K+K
Sbjct: 65 RIDEKNFVVVMVTKTK 80
Score = 140 (54.3 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 113 (44.8 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 275 DQPE-QDMPHAINVTPA-----------EQEAIQRLEAMGFDRALVIEAFLACDRNEELA 322
DQP+ Q+M I PA E + +L+A+GF +LVI+A+ AC++NE LA
Sbjct: 237 DQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQLKALGFPESLVIQAYFACEKNENLA 296
Query: 323 ANYLLENAGDFED 335
AN+LL +F+D
Sbjct: 297 ANFLLSQ--NFDD 307
Score = 63 (27.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 142 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV 195
Query: 324 NYLL 327
YLL
Sbjct: 196 EYLL 199
>ASPGD|ASPL0000045893 [details] [associations]
symbol:AN2304 species:162425 "Emericella nidulans"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0042177
"negative regulation of protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 EMBL:BN001307
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0006289 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
TIGRFAMs:TIGR00601 OMA:EKGFIVC EnsemblFungi:CADANIAT00008997
Uniprot:C8VN52
Length = 369
Score = 159 (61.0 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 31/51 (60%), Positives = 41/51 (80%)
Query: 285 INVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDFED 335
I+VT E++AI+RL +GF R LVI+A+ ACD+NEELAANYL EN+ D +D
Sbjct: 318 IHVTEEERDAIERLCRLGFPRDLVIQAYFACDKNEELAANYLFENSDDGDD 368
Score = 140 (54.3 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MKLT + LK F I +PS+TV VK+ I +G D P + LI++GK+L+D+ T+
Sbjct: 1 MKLTFRDLKQQKFVIDAEPSETVGQVKEKISTEKGWD-VPSLK--LIYSGKILQDDKTVE 57
Query: 61 DNKVSEDGFLVVMLSKSKTLGSA 83
+ E GF+V M+SK KT S+
Sbjct: 58 FYNIEEKGFIVCMVSKPKTQPSS 80
Score = 127 (49.8 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 145 SNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
S L+ G+ E+ I Q+M MG +++E + RA++AA+ NP+RA++YL +GIPE +
Sbjct: 138 SALLTGSQSEEVINQMMSMG---FEREQINRAMRAAFFNPDRAIEYLLNGIPENIQ 190
Score = 62 (26.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 282 PHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
P A+ +E I ++ +MGF+R + A A N + A YLL
Sbjct: 137 PSALLTGSQSEEVINQMMSMGFEREQINRAMRAAFFNPDRAIEYLL 182
Score = 36 (17.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 157 IQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLY 192
I+++ +G + ++ V +A A N E A +YL+
Sbjct: 328 IERLCRLG---FPRDLVIQAYFACDKNEELAANYLF 360
>UNIPROTKB|F1N9B7 [details] [associations]
symbol:RAD23B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000715 "nucleotide-excision repair, DNA
damage recognition" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0032434
"regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0071942 "XPC complex" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 GO:GO:0005737 GO:GO:0043161
GO:GO:0003684 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0071942
GO:GO:0032434 GO:GO:0000715 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
TIGRFAMs:TIGR00601 EMBL:AADN02062165 EMBL:AADN02062166
EMBL:AADN02062167 IPI:IPI00580312 Ensembl:ENSGALT00000025051
OMA:GIPEQME Uniprot:F1N9B7
Length = 381
Score = 154 (59.3 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 255 LRNNQQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLA 314
+ + Q L S G + + M + I VTP E+EAI+RL+A+GF LVI+A+ A
Sbjct: 303 IESRQGLSGSDDSASTGGVAEAGNGHMSY-IQVTPQEKEAIERLKALGFPEGLVIQAYFA 361
Query: 315 CDRNEELAANYLLENAGDFED 335
C++NE LAAN+LL+ D ED
Sbjct: 362 CEKNENLAANFLLQQNFD-ED 381
Score = 134 (52.2 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 23 VMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADNKVSEDGFLVVMLSKSKTLGS 82
V A+K+ IE +GKD +P Q LI+ GK+L D+T L + K+ E F+VVM++K K +
Sbjct: 1 VKALKEKIESERGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPKAATA 60
Query: 83 A 83
A
Sbjct: 61 A 61
Score = 125 (49.1 bits), Expect = 7.9e-29, Sum P(3) = 7.9e-29
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 140 YGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIP-ET 198
+ A S LV G E + +IM MG +++E V AL+A++NNP+R V+YL GIP +
Sbjct: 151 FEDAISALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRTVEYLLMGIPGDN 207
Query: 199 AEVAVP 204
VA P
Sbjct: 208 QAVAEP 213
Score = 55 (24.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 267 DGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
D S ++F+ D A+ + + + + +MG++R VI A A N + YL
Sbjct: 144 DTSRSNLFE----DAISALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRTVEYL 199
Query: 327 L 327
L
Sbjct: 200 L 200
>DICTYBASE|DDB_G0286357 [details] [associations]
symbol:rcbA "repC-binding protein A" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 dictyBase:DDB_G0286357 Prosite:PS00299
GO:GO:0005634 GO:GO:0045335 GO:GO:0043161 GenomeReviews:CM000153_GR
GO:GO:0003684 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
EMBL:AAFI02000085 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272 KO:K10839
InterPro:IPR006636 SMART:SM00727 EMBL:AF103870 RefSeq:XP_637729.1
HSSP:P54725 ProteinModelPortal:Q54LV1 SMR:Q54LV1 STRING:Q54LV1
PRIDE:Q54LV1 EnsemblProtists:DDB0191177 GeneID:8625594
KEGG:ddi:DDB_G0286357 OMA:MINEPLE Gene3D:1.10.10.540
SUPFAM:SSF101238 Uniprot:Q54LV1
Length = 342
Score = 219 (82.2 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 67/205 (32%), Positives = 96/205 (46%)
Query: 139 TYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPET 198
T Q +S+ G +LE TI+ I DMG + ++ V RAL+ +NN ERA++YL SG
Sbjct: 149 TSPQQSSDFATGTELEATIKNITDMG---FARDQVLRALRLTFNNAERAIEYLVSG---- 201
Query: 199 AEVAVPVAHFPXXXXXXXXXXXXX--PVSGVPNSSPLNMFPQETXXXXXXXXXXXXDFLR 256
+P A+ P P + N N+ + +
Sbjct: 202 ---NIPAANDPEDEEEMEGGGGSGDNPFEALRNHPHFNLLREAISKNPSIIPGILQQLAQ 258
Query: 257 NNQQLI-------NEPVDGSEGDMFDQPEQDMPH-AINVTPAEQEAIQRLEAM-GFDRAL 307
N L+ NE + +GD P + + VT E EAIQRL+A+ G D++
Sbjct: 259 TNPALVRQIQENPNEFIRLFQGD--GNPGGNPGQFTLQVTQEESEAIQRLQALTGMDKST 316
Query: 308 VIEAFLACDRNEELAANYLLENAGD 332
VIEA+ ACD+NEEL A+YL E A D
Sbjct: 317 VIEAYFACDKNEELTASYLFETADD 341
Score = 113 (44.8 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+T+K + + V D +A KN+ + K N Q LI++GK+L+D+ TL
Sbjct: 1 MKVTIKNINKEIYVFEVN-GDLTVAELKNL--ISEKHNQTPSWQTLIYSGKILEDKRTLE 57
Query: 61 DNKVSEDGFLVVMLSKSK 78
+++ GF+V+M+ K +
Sbjct: 58 SYNITDSGFIVMMIKKPR 75
>POMBASE|SPBC2D10.12 [details] [associations]
symbol:rhp23 "Rad23 homolog Rhp23" species:4896
"Schizosaccharomyces pombe" [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=TAS] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0031593 "polyubiquitin binding" evidence=TAS] [GO:0042177
"negative regulation of protein catabolic process" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 PomBase:SPBC2D10.12 GO:GO:0005829
GO:GO:0007346 GO:GO:0005635 GO:GO:0003684 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016567 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0030433 GO:GO:0042177
GO:GO:0031593 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0006289 eggNOG:COG5272 KO:K10839 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
HOGENOM:HOG000172162 OrthoDB:EOG4MSH80 TIGRFAMs:TIGR00601
EMBL:AF174293 PIR:T40115 RefSeq:NP_596231.1
ProteinModelPortal:O74803 SMR:O74803 MINT:MINT-216365 STRING:O74803
PRIDE:O74803 EnsemblFungi:SPBC2D10.12.1 GeneID:2540481
KEGG:spo:SPBC2D10.12 OMA:YERSEVE NextBio:20801608 Uniprot:O74803
Length = 368
Score = 159 (61.0 bits), Expect = 9.8e-28, Sum P(3) = 9.8e-28
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 256 RNNQQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLAC 315
+N + + +G+EG+ P + I +T E E+I RL +GFDR +VI+A+LAC
Sbjct: 290 QNPEAFLQLLAEGAEGESA-LPSGGIQ--IQITQEESESIDRLCQLGFDRNIVIQAYLAC 346
Query: 316 DRNEELAANYLLENAGDFED 335
D+NEELAANYL E+ + ED
Sbjct: 347 DKNEELAANYLFEHGHESED 366
Score = 124 (48.7 bits), Expect = 9.8e-28, Sum P(3) = 9.8e-28
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M LT K L+ F I +DT ++ K E +Q + NY +Q LI++G++L D+ T+
Sbjct: 1 MNLTFKNLQQQKFVISDVSADTKISELK--EKIQTQQNYEVERQKLIYSGRILADDKTVG 58
Query: 61 DNKVSEDGFLVVMLSKSKT 79
+ + E F+V M+S+ KT
Sbjct: 59 EYNIKEQDFIVCMVSRPKT 77
Score = 116 (45.9 bits), Expect = 9.8e-28, Sum P(3) = 9.8e-28
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 144 ASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPE 197
A+ L G ++ +++MG +++ V RA++AA+NNP+RAV+YL +GIPE
Sbjct: 138 ANTLAVGAQRNVAVENMVEMG---YERSEVERAMRAAFNNPDRAVEYLLTGIPE 188
Score = 55 (24.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 294 AIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
A++ + MG++R+ V A A N + A YLL
Sbjct: 150 AVENMVEMGYERSEVERAMRAAFNNPDRAVEYLL 183
Score = 45 (20.9 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 155 QTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLY 192
++I ++ +G +D+ V +A A N E A +YL+
Sbjct: 324 ESIDRLCQLG---FDRNIVIQAYLACDKNEELAANYLF 358
>GENEDB_PFALCIPARUM|PF10_0114 [details] [associations]
symbol:PF10_0114 "DNA repair protein RAD23,
putative" species:5833 "Plasmodium falciparum" [GO:0003684 "damaged
DNA binding" evidence=ISS] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
EMBL:AE014185 SUPFAM:SSF46934 GO:GO:0006289 KO:K10839 HSSP:P54725
Gene3D:1.10.10.540 SUPFAM:SSF101238 HOGENOM:HOG000172162
RefSeq:XP_001347399.1 ProteinModelPortal:Q8IJS8 IntAct:Q8IJS8
MINT:MINT-1571420 EnsemblProtists:PF10_0114:mRNA GeneID:810272
KEGG:pfa:PF10_0114 EuPathDB:PlasmoDB:PF3D7_1011700 OMA:NENEMES
ProtClustDB:CLSZ2515023 Uniprot:Q8IJS8
Length = 389
Score = 150 (57.9 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 285 INVTPA---EQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDF 333
I +TP E E+I++LE++GF + + +EAF+ACD+NEE+AANYL EN DF
Sbjct: 335 IPITPLNENEMESIKKLESLGFPKHVALEAFIACDKNEEMAANYLFENMNDF 386
Score = 124 (48.7 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 138 DTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIP- 196
+++ A S L+ G+ L+++I I MG ++KE V +A+ AYNNP RA+DYL +G P
Sbjct: 135 NSFNNAESMLLTGDKLKESIDNICAMG---FEKEQVKKAMILAYNNPNRAIDYLTNGFPN 191
Query: 197 ETAEVAV 203
E V V
Sbjct: 192 ENVNVNV 198
Score = 122 (48.0 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+ V+TL+ + EI V P D+++ +KK +E V + P +Q LI +GK+LKDE
Sbjct: 1 MKIKVRTLQNNEEEINVDPDDSILDLKKKVEVVLA--DMPSDKQKLIFSGKILKDEDKAT 58
Query: 61 DNKVSEDGFLVVMLSK 76
D + ++ ++VM+++
Sbjct: 59 DI-LKDNDTVIVMVTR 73
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 292 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
+E+I + AMGF++ V +A + N A +YL
Sbjct: 151 KESIDNICAMGFEKEQVKKAMILAYNNPNRAIDYL 185
Score = 45 (20.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 151 NDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPE-TAE 200
N++E +I+++ +G + K A A N E A +YL+ + + T+E
Sbjct: 343 NEME-SIKKLESLG---FPKHVALEAFIACDKNEEMAANYLFENMNDFTSE 389
>UNIPROTKB|Q8IJS8 [details] [associations]
symbol:PF10_0114 "DNA repair protein RAD23, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003684 "damaged DNA
binding" evidence=ISS] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
EMBL:AE014185 SUPFAM:SSF46934 GO:GO:0006289 KO:K10839 HSSP:P54725
Gene3D:1.10.10.540 SUPFAM:SSF101238 HOGENOM:HOG000172162
RefSeq:XP_001347399.1 ProteinModelPortal:Q8IJS8 IntAct:Q8IJS8
MINT:MINT-1571420 EnsemblProtists:PF10_0114:mRNA GeneID:810272
KEGG:pfa:PF10_0114 EuPathDB:PlasmoDB:PF3D7_1011700 OMA:NENEMES
ProtClustDB:CLSZ2515023 Uniprot:Q8IJS8
Length = 389
Score = 150 (57.9 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 285 INVTPA---EQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGDF 333
I +TP E E+I++LE++GF + + +EAF+ACD+NEE+AANYL EN DF
Sbjct: 335 IPITPLNENEMESIKKLESLGFPKHVALEAFIACDKNEEMAANYLFENMNDF 386
Score = 124 (48.7 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 138 DTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIP- 196
+++ A S L+ G+ L+++I I MG ++KE V +A+ AYNNP RA+DYL +G P
Sbjct: 135 NSFNNAESMLLTGDKLKESIDNICAMG---FEKEQVKKAMILAYNNPNRAIDYLTNGFPN 191
Query: 197 ETAEVAV 203
E V V
Sbjct: 192 ENVNVNV 198
Score = 122 (48.0 bits), Expect = 7.5e-27, Sum P(3) = 7.5e-27
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+ V+TL+ + EI V P D+++ +KK +E V + P +Q LI +GK+LKDE
Sbjct: 1 MKIKVRTLQNNEEEINVDPDDSILDLKKKVEVVLA--DMPSDKQKLIFSGKILKDEDKAT 58
Query: 61 DNKVSEDGFLVVMLSK 76
D + ++ ++VM+++
Sbjct: 59 DI-LKDNDTVIVMVTR 73
Score = 53 (23.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 292 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
+E+I + AMGF++ V +A + N A +YL
Sbjct: 151 KESIDNICAMGFEKEQVKKAMILAYNNPNRAIDYL 185
Score = 45 (20.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 151 NDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPE-TAE 200
N++E +I+++ +G + K A A N E A +YL+ + + T+E
Sbjct: 343 NEME-SIKKLESLG---FPKHVALEAFIACDKNEEMAANYLFENMNDFTSE 389
>UNIPROTKB|G4MUE8 [details] [associations]
symbol:MGG_01656 "UV excision repair protein Rad23"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 GO:GO:0005634 GO:GO:0043161
GO:GO:0003684 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 EMBL:CM001232 SUPFAM:SSF46934
GO:GO:0006289 KO:K10839 InterPro:IPR006636 SMART:SM00727
Gene3D:1.10.10.540 SUPFAM:SSF101238 TIGRFAMs:TIGR00601
RefSeq:XP_003714642.1 ProteinModelPortal:G4MUE8 SMR:G4MUE8
EnsemblFungi:MGG_01656T0 GeneID:2679333 KEGG:mgr:MGG_01656
Uniprot:G4MUE8
Length = 401
Score = 155 (59.6 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MK+T K LK F I V+P+D + AVK+ I + +G D P Q+L I++GK+LKDE T+
Sbjct: 1 MKVTFKDLKQQKFVIEVEPTDLISAVKQKISEERGWD--PKLQKL-IYSGKILKDEETVE 57
Query: 61 DNKVSEDGFLVVMLSKSK 78
K+ E GF+V +++K K
Sbjct: 58 SYKIEEKGFVVCVVNKPK 75
Score = 137 (53.3 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 268 GSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
G + D D P AI VT E++AI+RL +GF R I+A+ ACD+NEELAAN+L
Sbjct: 333 GEDADE-DAPLPPGAQAIAVTEEERDAIERLCRLGFGREQAIQAYFACDKNEELAANFLF 391
Query: 328 ENAGD 332
+ D
Sbjct: 392 DQPDD 396
Score = 91 (37.1 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 147 LVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEVA 202
L G ++ I + MG +++ + A++AAY NP+RAV+YL +GIPE A
Sbjct: 141 LSTGAARDEAIANMEAMG---FERTQIDAAMRAAYFNPDRAVEYLLNGIPENLRQA 193
Score = 79 (32.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 282 PHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
P+ ++ A EAI +EAMGF+R + A A N + A YLL
Sbjct: 138 PNMLSTGAARDEAIANMEAMGFERTQIDAAMRAAYFNPDRAVEYLL 183
Score = 37 (18.1 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 253 DFLRNNQQ 260
DFLRNN Q
Sbjct: 281 DFLRNNTQ 288
>FB|FBgn0026777 [details] [associations]
symbol:Rad23 "Rad23" species:7227 "Drosophila melanogaster"
[GO:0006289 "nucleotide-excision repair" evidence=ISS;NAS]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 GO:GO:0005634
GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 EMBL:AE014135
SUPFAM:SSF46934 GO:GO:0006289 KO:K10839 InterPro:IPR006636
SMART:SM00727 HSSP:P54725 Gene3D:1.10.10.540 SUPFAM:SSF101238
GeneTree:ENSGT00390000012078 TIGRFAMs:TIGR00601 OMA:NENEMES
UniGene:Dm.1397 GeneID:43785 KEGG:dme:Dmel_CG1836 CTD:43785
FlyBase:FBgn0026777 ChiTaRS:Rad23 GenomeRNAi:43785 NextBio:835805
EMBL:AF132147 RefSeq:NP_651918.2 SMR:Q9V3W9 IntAct:Q9V3W9
MINT:MINT-290357 STRING:Q9V3W9 EnsemblMetazoa:FBtr0089122
EnsemblMetazoa:FBtr0333679 UCSC:CG1836-RA InParanoid:Q9V3W9
Uniprot:Q9V3W9
Length = 414
Score = 138 (53.6 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 142 QAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIP 196
+A SNL+ G++ QT+ +++MG + +E V RA+ A+YNNPERAV+YL +GIP
Sbjct: 148 RAESNLLMGDEYNQTVLSMVEMG---YPREQVERAMAASYNNPERAVEYLINGIP 199
Score = 132 (51.5 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 268 GSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
GS D D + I + +++AI+RL+A+GF ALV++A+ AC++NEE AAN+LL
Sbjct: 349 GSAADNEDLEQPLGVSTIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQAANFLL 408
Query: 328 ENAGD 332
++ D
Sbjct: 409 SSSFD 413
Score = 123 (48.4 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M +T+K L+ F I P TV+ +KK I + +G + Y +Q LI+ G +L D+ T+
Sbjct: 1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPE-YVAEKQKLIYAGVILTDDRTVG 59
Query: 61 DNKVSEDGFLVVMLSKSKT 79
V E F+VVML++ +
Sbjct: 60 SYNVDEKKFIVVMLTRDSS 78
Score = 46 (21.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 292 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
Q + +E MG+ R V A A N E A YL+
Sbjct: 161 QTVLSMVE-MGYPREQVERAMAASYNNPERAVEYLI 195
Score = 44 (20.5 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 264 EPVDGSEGDMFDQPEQDMPHAINVTPAEQ 292
E V+ + ++ PE+ + + IN PAE+
Sbjct: 174 EQVERAMAASYNNPERAVEYLINGIPAEE 202
>FB|FBgn0039147 [details] [associations]
symbol:CG10694 species:7227 "Drosophila melanogaster"
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0003684
"damaged DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
EMBL:AE014297 GO:GO:0005634 GO:GO:0043161 GO:GO:0003684
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272
KO:K10839 HSSP:P54725 Gene3D:1.10.10.540 SUPFAM:SSF101238
GeneTree:ENSGT00390000012078 EMBL:AY089339 RefSeq:NP_651212.1
UniGene:Dm.5087 SMR:Q9VCD5 IntAct:Q9VCD5 MINT:MINT-325299
STRING:Q9VCD5 EnsemblMetazoa:FBtr0084542 GeneID:42855
KEGG:dme:Dmel_CG10694 UCSC:CG10694-RA FlyBase:FBgn0039147
InParanoid:Q9VCD5 OMA:GRIMEDE OrthoDB:EOG4C5B1F GenomeRNAi:42855
NextBio:830940 Uniprot:Q9VCD5
Length = 290
Score = 204 (76.9 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 56/193 (29%), Positives = 95/193 (49%)
Query: 148 VAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEVAVPVAH 207
+A ND Q + +M MG G +E V AL+A++N+PERA++YL +GIP+ +A
Sbjct: 108 LAPND--QWVSDLMSMGYG---EEEVRSALRASFNHPERAIEYLINGIPQEVVSEQGLAA 162
Query: 208 FPXXXXXXXXXXXXXPVSGVPNSSPLNMFPQ---ETXXXXXXXXXXXXD-FLRNNQQLIN 263
P ++ +N P+ + F RN ++L+N
Sbjct: 163 IPSVQTSDQLQQLMADLNITRMREMINQNPELIHRLMNRLAETDPATFEVFQRNQEELMN 222
Query: 264 EPVDGSEGDMFDQPEQDMPHA-INVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELA 322
G+ + ++ H I +T E A+ RLEA+GF+R + ++A+LACD++E+LA
Sbjct: 223 MISGGAS-----RTPNEIEHLQITLTAEETAAVGRLEALGFERVMAVQAYLACDKDEQLA 277
Query: 323 ANYLLENAGDFED 335
A L+ + + D
Sbjct: 278 AEVLIRQSEEDRD 290
Score = 85 (35.0 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 19/78 (24%), Positives = 45/78 (57%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
MKL+++ L + + S V A+K+ + ++ + P LI++G++++D L+
Sbjct: 1 MKLSIRMLDQRTITLEMNESQEVRALKQKLGNLP-EVAMPAENLQLIYSGRIMEDAMPLS 59
Query: 61 DNKVSEDGFLVVMLSKSK 78
+ +++ED ++V++ K K
Sbjct: 60 EYRIAEDK-IIVLMGKKK 76
>RGD|1309899 [details] [associations]
symbol:Rad23a "RAD23 homolog A (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA;ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0031593
"polyubiquitin binding" evidence=IEA;ISO] [GO:0032434 "regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA;ISO]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR004806
InterPro:IPR009060 InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627
Pfam:PF09280 PRINTS:PR01839 SMART:SM00213 RGD:1309899 GO:GO:0005634
GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0006289 eggNOG:COG5272 KO:K10839 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
GeneTree:ENSGT00390000012078 HOGENOM:HOG000172162
TIGRFAMs:TIGR00601 CTD:5886 HOVERGEN:HBG055042 OrthoDB:EOG4M399F
UniGene:Rn.105419 EMBL:BC084695 IPI:IPI00365167
RefSeq:NP_001013208.1 SMR:Q5XFX7 STRING:Q5XFX7
Ensembl:ENSRNOT00000004042 GeneID:361381 KEGG:rno:361381
NextBio:676090 Genevestigator:Q5XFX7 Uniprot:Q5XFX7
Length = 351
Score = 162 (62.1 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 30/76 (39%), Positives = 52/76 (68%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+KTL+ F+IR++P +TV +K+ IE +G+D +P Q LI+ GK+L D+ + +
Sbjct: 5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDIPIKEY 64
Query: 63 KVSEDGFLVVMLSKSK 78
+ E F+VVM++K+K
Sbjct: 65 HIDEKNFVVVMVTKAK 80
Score = 140 (54.3 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 143 AASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
AAS LV G++ E + +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 207
Score = 63 (27.2 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 265 PVDGSEGDMFDQPEQDMPHAINVTPAEQEA-IQRLEAMGFDRALVIEAFLACDRNEELAA 323
P GS G E+D + VT +E E + + +MG++R V+ A A N A
Sbjct: 142 PSSGSSGR-----EEDAASTL-VTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAV 195
Query: 324 NYLL 327
YLL
Sbjct: 196 EYLL 199
Score = 55 (24.4 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 260 QLINEP---------VDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEA 300
Q++NEP V+G G + ++ Q M + I VTP E+EAI+R A
Sbjct: 281 QMLNEPPGELADISDVEGEVGALGEEAPQ-MNY-IQVTPQEKEAIERSPA 328
>SGD|S000000763 [details] [associations]
symbol:RAD23 "Protein with ubiquitin-like N terminus"
species:4932 "Saccharomyces cerevisiae" [GO:0003684 "damaged DNA
binding" evidence=IEA;IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000224
"peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
activity" evidence=IDA] [GO:0006517 "protein deglycosylation"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0000502 "proteasome complex" evidence=IMP;IPI] [GO:0030433
"ER-associated protein catabolic process" evidence=IMP] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0000111 "nucleotide-excision repair
factor 2 complex" evidence=IDA] [GO:0000715 "nucleotide-excision
repair, DNA damage recognition" evidence=TAS] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00240 Pfam:PF00627 Pfam:PF09280
PRINTS:PR01839 SMART:SM00213 SGD:S000000763 Prosite:PS00299
GO:GO:0005739 GO:GO:0003684 EMBL:BK006939 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0030433 GO:GO:0000502
EMBL:U18779 InterPro:IPR019955 PROSITE:PS50053 EMBL:S65964
EMBL:L22173 GO:GO:0043130 SUPFAM:SSF46934 GO:GO:0006517
eggNOG:COG5272 RefSeq:NP_010877.3 GeneID:856674 KEGG:sce:YEL037C
KO:K10839 GO:GO:0000715 InterPro:IPR006636 SMART:SM00727 KO:K03263
RefSeq:NP_010880.3 GeneID:856677 KEGG:sce:YEL034W PDB:1X3W PDB:1X3Z
PDB:3ESW PDBsum:1X3W PDBsum:1X3Z PDBsum:3ESW Gene3D:1.10.10.540
SUPFAM:SSF101238 EMBL:L25428 EMBL:L22172 EMBL:S66117 EMBL:AY693018
PIR:S50507 PDB:2QSF PDB:2QSG PDB:2QSH PDB:3M62 PDBsum:2QSF
PDBsum:2QSG PDBsum:2QSH PDBsum:3M62 ProteinModelPortal:P32628
SMR:P32628 DIP:DIP-1548N IntAct:P32628 MINT:MINT-404213
STRING:P32628 PaxDb:P32628 PeptideAtlas:P32628 PRIDE:P32628
EnsemblFungi:YEL037C CYGD:YEL037c GeneTree:ENSGT00390000012078
HOGENOM:HOG000172162 OMA:MANPEVF OrthoDB:EOG4MSH80
EvolutionaryTrace:P32628 NextBio:982693 Genevestigator:P32628
GermOnline:YEL037C GO:GO:0000111 TIGRFAMs:TIGR00601 Uniprot:P32628
Length = 398
Score = 139 (54.0 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 139 TYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPET 198
T + V G + +TI++IM+MG + +E V RAL+AA+NNP+RAV+YL GIPE
Sbjct: 134 TESASTPGFVVGTERNETIERIMEMG---YQREEVERALRAAFNNPDRAVEYLLMGIPEN 190
Query: 199 AEVAVP 204
P
Sbjct: 191 LRQPEP 196
Score = 126 (49.4 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 276 QPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 332
Q E + ++ TP + +AI RL +GF+R LVI+ + ACD+NEE AAN L + D
Sbjct: 342 QGEGEGSFQVDYTPEDDQAISRLCELGFERDLVIQVYFACDKNEEAAANILFSDHAD 398
Score = 85 (35.0 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 21/80 (26%), Positives = 46/80 (57%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNI-EDVQGKDNYPCGQQLLIHNGKVLKDETTL 59
+ LT K K + ++PS+T++ K + + + +++ Q LI++GKVL+D T+
Sbjct: 2 VSLTFKNFKKEKVPLDLEPSNTILETKTKLAQSISCEES----QIKLIYSGKVLQDSKTV 57
Query: 60 ADNKVSEDGFLVVMLSKSKT 79
++ + + +V M+S+ K+
Sbjct: 58 SECGLKDGDQVVFMVSQKKS 77
>UNIPROTKB|B4DDJ7 [details] [associations]
symbol:RAD23A "cDNA FLJ51789, highly similar to UV excision
repair protein RAD23 homolog A" species:9606 "Homo sapiens"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR000449
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 GO:GO:0005634
GO:GO:0043161 GO:GO:0003684 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 SUPFAM:SSF46934 GO:GO:0006289 InterPro:IPR006636
SMART:SM00727 Gene3D:1.10.10.540 SUPFAM:SSF101238
TIGRFAMs:TIGR00601 HOVERGEN:HBG055042 UniGene:Hs.643267
HGNC:HGNC:9812 ChiTaRS:RAD23A EMBL:AC092069 EMBL:AK293219
IPI:IPI01011338 SMR:B4DDJ7 STRING:B4DDJ7 Ensembl:ENST00000541222
Uniprot:B4DDJ7
Length = 198
Score = 158 (60.7 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 260 QLINEPVDGSEGDMFD-QPE-----QDMPHA--INVTPAEQEAIQRLEAMGFDRALVIEA 311
Q++NEP G D+ D + E ++ P I VTP E+EAI+RL+A+GF +LVI+A
Sbjct: 117 QMLNEP-PGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQA 175
Query: 312 FLACDRNEELAANYLLENAGDFED 335
+ AC++NE LAAN+LL +F+D
Sbjct: 176 YFACEKNENLAANFLLSQ--NFDD 197
Score = 109 (43.4 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 157 IQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAE 200
+ +IM MG +++E V AL+A+YNNP RAV+YL +GIP + E
Sbjct: 2 LTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE 42
>WB|WBGene00013924 [details] [associations]
symbol:rad-23 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR004806 InterPro:IPR009060 InterPro:IPR015360
Pfam:PF00240 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839 SMART:SM00213
GO:GO:0005634 GO:GO:0043161 GO:GO:0003684 GO:GO:0000003
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0006289 eggNOG:COG5272
KO:K10839 InterPro:IPR006636 SMART:SM00727 EMBL:Z69904
Gene3D:1.10.10.540 SUPFAM:SSF101238 GeneTree:ENSGT00390000012078
HOGENOM:HOG000172162 RefSeq:NP_496488.2 ProteinModelPortal:Q23451
SMR:Q23451 DIP:DIP-25917N IntAct:Q23451 MINT:MINT-226728
STRING:Q23451 PaxDb:Q23451 EnsemblMetazoa:ZK20.3.1
EnsemblMetazoa:ZK20.3.2 GeneID:174785 KEGG:cel:CELE_ZK20.3
UCSC:ZK20.3 CTD:174785 WormBase:ZK20.3 InParanoid:Q23451
OMA:YSGIPEA NextBio:885496 Uniprot:Q23451
Length = 323
Score = 139 (54.0 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 31/83 (37%), Positives = 52/83 (62%)
Query: 255 LRNNQQ----LINEPVDGSEGDMFDQPEQDMP--HAINVTPAEQEAIQRLEAMGFD--RA 306
++NNQQ L+N G+ + PE++ P H I+++P E AI+R++A+ + A
Sbjct: 237 IQNNQQAFMDLLNGGAQGAGAAAGNAPERNTPRRHVIHLSPEEAAAIERIKAIVVNAPEA 296
Query: 307 LVIEAFLACDRNEELAANYLLEN 329
+V+EA+ ACD+NEE A N++ N
Sbjct: 297 VVVEAYFACDKNEEAAINFIFSN 319
Score = 110 (43.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
+ +T +TL +F + + T+ VK + +G D+Y Q LI+NGK+L D +
Sbjct: 3 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKG-DDYAPELQKLIYNGKILDDSVKVG 61
Query: 61 DNKVSEDGFLVVMLSKSK 78
+ F+VVMLSK K
Sbjct: 62 EVGFDSSKFVVVMLSKRK 79
Score = 93 (37.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 151 NDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETA 199
++ E+ + I MG +D+E AL+AA+ NP+RAV++L +G+P+ A
Sbjct: 127 DEQEENVLAITGMG---YDREQTIAALRAAFWNPDRAVEFLLNGLPDDA 172
Score = 65 (27.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 277 PEQDMP-HAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 332
PE P A +T ++E + + MG+DR I A A N + A +LL D
Sbjct: 114 PEAAAPAEAEALTDEQEENVLAITGMGYDREQTIAALRAAFWNPDRAVEFLLNGLPD 170
>UNIPROTKB|Q5W0S5 [details] [associations]
symbol:RAD23B "UV excision repair protein RAD23 homolog B"
species:9606 "Homo sapiens" [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 GO:GO:0007283
GO:GO:0006974 InterPro:IPR019955 PROSITE:PS50053 HOVERGEN:HBG000057
HOGENOM:HOG000172162 EMBL:AL137852 UniGene:Hs.521640 HGNC:HGNC:9813
ChiTaRS:RAD23B IPI:IPI00642549 SMR:Q5W0S5 Ensembl:ENST00000419616
OrthoDB:EOG4B5P6W Uniprot:Q5W0S5
Length = 146
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++T+KTL+ F+I + P +TV A+K+ IE +GKD +P Q LI+ GK+L D+T L
Sbjct: 1 MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60
Query: 61 DNKVSEDGFLVVMLSKSKTLGS 82
+ K+ E F+VVM++K K + +
Sbjct: 61 EYKIDEKNFVVVMVTKPKAVST 82
>UNIPROTKB|P61282 [details] [associations]
symbol:NEDD8 "NEDD8" species:9913 "Bos taurus" [GO:0008104
"protein localization" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0008104
GO:GO:0006357 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 EMBL:AF227256 EMBL:BC102306 IPI:IPI00688362
RefSeq:NP_777189.1 UniGene:Bt.275 ProteinModelPortal:P61282
SMR:P61282 STRING:P61282 PRIDE:P61282 GeneID:286796 KEGG:bta:286796
CTD:4738 InParanoid:P61282 KO:K12158 OrthoDB:EOG4N04GQ
NextBio:20806450 Uniprot:P61282
Length = 81
Score = 129 (50.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G EI ++P+D V +K+ +E+ K+ P QQ LI++GK + DE T A
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D K+ L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72
>UNIPROTKB|Q15843 [details] [associations]
symbol:NEDD8 "NEDD8" species:9606 "Homo sapiens"
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0045116 "protein neddylation" evidence=IDA] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 EMBL:D23662 Prosite:PS00299 GO:GO:0005634
GO:GO:0008104 GO:GO:0006357 GO:GO:0014070 GO:GO:0006511
GO:GO:0009653 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 PDB:3DQV PDBsum:3DQV GO:GO:0045116
HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 PDB:2NVU PDBsum:2NVU CTD:4738 KO:K12158
OrthoDB:EOG4N04GQ OMA:EPTDKVD EMBL:CR407662 EMBL:BC104200
EMBL:BC104201 EMBL:BC104664 IPI:IPI00020008 RefSeq:NP_006147.1
UniGene:Hs.531064 PDB:1NDD PDB:1R4M PDB:1R4N PDB:1XT9 PDB:2BKR
PDB:2KO3 PDB:3DBH PDB:3DBL PDB:3DBR PDB:3GZN PDB:4F8C PDB:4FBJ
PDB:4HCP PDBsum:1NDD PDBsum:1R4M PDBsum:1R4N PDBsum:1XT9
PDBsum:2BKR PDBsum:2KO3 PDBsum:3DBH PDBsum:3DBL PDBsum:3DBR
PDBsum:3GZN PDBsum:4F8C PDBsum:4FBJ PDBsum:4HCP
ProteinModelPortal:Q15843 SMR:Q15843 DIP:DIP-29266N IntAct:Q15843
MINT:MINT-268324 STRING:Q15843 PhosphoSite:Q15843 DMDM:2833270
PaxDb:Q15843 PeptideAtlas:Q15843 PRIDE:Q15843
Ensembl:ENST00000250495 GeneID:4738 KEGG:hsa:4738 UCSC:uc001wnn.2
GeneCards:GC14M024686 HGNC:HGNC:7732 HPA:CAB004082 MIM:603171
neXtProt:NX_Q15843 PharmGKB:PA31537 InParanoid:Q15843
PhylomeDB:Q15843 EvolutionaryTrace:Q15843 GenomeRNAi:4738
NextBio:18272 PMAP-CutDB:Q15843 ArrayExpress:Q15843 Bgee:Q15843
CleanEx:HS_NEDD8 Genevestigator:Q15843 GermOnline:ENSG00000129559
Uniprot:Q15843
Length = 81
Score = 129 (50.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G EI ++P+D V +K+ +E+ K+ P QQ LI++GK + DE T A
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D K+ L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72
>MGI|MGI:97301 [details] [associations]
symbol:Nedd8 "neural precursor cell expressed, developmentally
down-regulated gene 8" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0006357 "regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0008104 "protein
localization" evidence=IDA] [GO:0014070 "response to organic cyclic
compound" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0045116 "protein neddylation"
evidence=ISO;ISS;ISA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
MGI:MGI:97301 Prosite:PS00299 GO:GO:0005634 GO:GO:0008104
GO:GO:0006357 GO:GO:0014070 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0045116 HOVERGEN:HBG000057
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 CTD:4738
KO:K12158 OrthoDB:EOG4N04GQ OMA:EPTDKVD EMBL:D10918 EMBL:BC004625
IPI:IPI00127021 PIR:JN0710 RefSeq:NP_032709.1 UniGene:Mm.296566
ProteinModelPortal:P29595 SMR:P29595 STRING:P29595
PhosphoSite:P29595 PaxDb:P29595 PRIDE:P29595
Ensembl:ENSMUST00000010520 Ensembl:ENSMUST00000163750 GeneID:18002
KEGG:mmu:18002 InParanoid:P29595 NextBio:293003 Bgee:P29595
Genevestigator:P29595 GermOnline:ENSMUSG00000010376 Uniprot:P29595
Length = 81
Score = 129 (50.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G EI ++P+D V +K+ +E+ K+ P QQ LI++GK + DE T A
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D K+ L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72
>RGD|3158 [details] [associations]
symbol:Nedd8 "neural precursor cell expressed, developmentally
down-regulated 8" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008104
"protein localization" evidence=IEA;ISO] [GO:0014070 "response to
organic cyclic compound" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0045116 "protein neddylation"
evidence=ISO;IDA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
RGD:3158 Prosite:PS00299 GO:GO:0005634 GO:GO:0008104 GO:GO:0006357
GO:GO:0014070 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0045116 HOVERGEN:HBG000057 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 CTD:4738 KO:K12158
OrthoDB:EOG4N04GQ GeneTree:ENSGT00660000095622 EMBL:AF095740
EMBL:BC084728 IPI:IPI00196202 RefSeq:NP_620233.1 UniGene:Rn.216415
ProteinModelPortal:Q71UE8 SMR:Q71UE8 STRING:Q71UE8 PhosphoSite:Q71UE8
PRIDE:Q71UE8 Ensembl:ENSRNOT00000064916 GeneID:25490 KEGG:rno:25490
UCSC:RGD:3158 InParanoid:Q71UE8 NextBio:606857 ArrayExpress:Q71UE8
Genevestigator:Q71UE8 GermOnline:ENSRNOG00000019895 Uniprot:Q71UE8
Length = 81
Score = 129 (50.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G EI ++P+D V +K+ +E+ K+ P QQ LI++GK + DE T A
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D K+ L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72
>UNIPROTKB|F5GXK7 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015985 ProteinModelPortal:F5GXK7 SMR:F5GXK7
Ensembl:ENST00000541272 ArrayExpress:F5GXK7 Bgee:F5GXK7
Uniprot:F5GXK7
Length = 169
Score = 128 (50.1 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPSDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F1NGE3 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
EMBL:AADN02025813 EMBL:AADN02025812 IPI:IPI00820812
Ensembl:ENSGALT00000039524 ArrayExpress:F1NGE3 Uniprot:F1NGE3
Length = 157
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 81 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 137
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 138 DYNIQKESTLHLVL 151
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 61
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 62 DYNIQKESTLHLVL 75
>UNIPROTKB|Q91021 [details] [associations]
symbol:UBB "Ubiquitin" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
eggNOG:COG5272 GeneTree:ENSGT00550000074658 HOVERGEN:HBG000057
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942
OrthoDB:EOG4WDDB6 UniGene:Gga.39142 EMBL:AADN02025813
EMBL:AADN02025812 EMBL:M11100 IPI:IPI00819877 PIR:I50438
STRING:Q91021 Ensembl:ENSGALT00000039515 InParanoid:Q91021
Uniprot:Q91021
Length = 157
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 81 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 137
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 138 DYNIQKESTLHLVL 151
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 5 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 61
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 62 DYNIQKESTLHLVL 75
>UNIPROTKB|F5H265 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015565 ProteinModelPortal:F5H265 SMR:F5H265
Ensembl:ENST00000535131 ArrayExpress:F5H265 Bgee:F5H265
Uniprot:F5H265
Length = 149
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F5H388 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015113 ProteinModelPortal:F5H388 SMR:F5H388
Ensembl:ENST00000541645 ArrayExpress:F5H388 Bgee:F5H388
Uniprot:F5H388
Length = 155
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F5H747 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PDB:4AP4 PDBsum:4AP4
EMBL:AC126309 HGNC:HGNC:12468 ChiTaRS:UBC IPI:IPI01009501
ProteinModelPortal:F5H747 SMR:F5H747 Ensembl:ENST00000540351
ArrayExpress:F5H747 Bgee:F5H747 Uniprot:F5H747
Length = 161
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F5H7Y5 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01010419 ProteinModelPortal:F5H7Y5 SMR:F5H7Y5
Ensembl:ENST00000544656 UCSC:uc001ugv.3 ArrayExpress:F5H7Y5
Bgee:F5H7Y5 Uniprot:F5H7Y5
Length = 153
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P62972 [details] [associations]
symbol:P62972 "Polyubiquitin" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PDB:2KDE PDBsum:2KDE EMBL:M11512
UniGene:Xl.4135 PDB:2K39 PDBsum:2K39 IntAct:P62972
MINT:MINT-5210721 EvolutionaryTrace:P62972 Uniprot:P62972
Length = 167
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 92 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 148
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 149 DYNIQKESTLHLVL 162
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 16 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 72
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 73 DYNIQKESTLHLVL 86
>UNIPROTKB|G3V9Z2 [details] [associations]
symbol:LOC100360548 "Protein LOC100360548" species:10116
"Rattus norvegicus" [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0008585 "female
gonad development" evidence=IEA] [GO:0010992 "ubiquitin
homeostasis" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
EMBL:CH473948 InterPro:IPR019954 GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 ProteinModelPortal:G3V9Z2
SMR:G3V9Z2 Ensembl:ENSRNOT00000066885 RGD:2321909 Uniprot:G3V9Z2
Length = 153
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F5GYU3 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01014596 ProteinModelPortal:F5GYU3 SMR:F5GYU3
Ensembl:ENST00000540700 ArrayExpress:F5GYU3 Bgee:F5GYU3
Uniprot:F5GYU3
Length = 134
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 117 (46.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 D 61
D
Sbjct: 134 D 134
>UNIPROTKB|F5H2Z3 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01014205 ProteinModelPortal:F5H2Z3 SMR:F5H2Z3
Ensembl:ENST00000546271 ArrayExpress:F5H2Z3 Bgee:F5H2Z3
Uniprot:F5H2Z3
Length = 136
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 117 (46.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 D 61
D
Sbjct: 134 D 134
>UNIPROTKB|F5H6Q2 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01018966 ProteinModelPortal:F5H6Q2 SMR:F5H6Q2
Ensembl:ENST00000535859 UCSC:uc002gyy.3 ArrayExpress:F5H6Q2
Bgee:F5H6Q2 Uniprot:F5H6Q2
Length = 123
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 90 (36.7 bits), Expect = 0.00087, P = 0.00087
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNG 50
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI G
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAG 123
>FB|FBgn0003941 [details] [associations]
symbol:RpL40 "Ribosomal protein L40" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;TAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS;TAS] [GO:0006464 "cellular protein modification
process" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS;IDA] [GO:0005840 "ribosome"
evidence=NAS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
Reactome:REACT_97910 InterPro:IPR000626 InterPro:IPR001975
Pfam:PF00240 Pfam:PF01020 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005875 EMBL:AE014134 GO:GO:0005811
GO:GO:0006412 GO:GO:0006464 GO:GO:0003735 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 OMA:QKYNCEK EMBL:X53059
EMBL:X59943 RefSeq:NP_476776.1 UniGene:Dm.19778
ProteinModelPortal:P18101 SMR:P18101 IntAct:P18101 STRING:P18101
PaxDb:P18101 PRIDE:P18101 EnsemblMetazoa:FBtr0077470 GeneID:33629
KEGG:dme:Dmel_CG2960 CTD:33629 FlyBase:FBgn0003941
InParanoid:P18101 OrthoDB:EOG4QBZNR PhylomeDB:P18101 ChiTaRS:RpL40
GenomeRNAi:33629 NextBio:784516 Bgee:P18101 GermOnline:CG2960
Uniprot:P18101
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>FB|FBgn0003942 [details] [associations]
symbol:RpS27A "Ribosomal protein S27A" species:7227
"Drosophila melanogaster" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0005875 "microtubule
associated complex" evidence=IDA] Reactome:REACT_97910
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0005829 GO:GO:0005634
GO:GO:0005875 EMBL:AE014134 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:KKVYTTP CTD:6233 GeneTree:ENSGT00550000074763
EMBL:M22536 EMBL:X69119 RefSeq:NP_476778.1 UniGene:Dm.36737
UniGene:Dm.4835 ProteinModelPortal:P15357 SMR:P15357 IntAct:P15357
MINT:MINT-1554051 STRING:P15357 PaxDb:P15357 PRIDE:P15357
EnsemblMetazoa:FBtr0080016 GeneID:34420 KEGG:dme:Dmel_CG5271
FlyBase:FBgn0003942 InParanoid:P15357 OrthoDB:EOG4ZPCBS
PhylomeDB:P15357 GenomeRNAi:34420 NextBio:788409 Bgee:P15357
GermOnline:CG5271 Uniprot:P15357
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F2Z4K9 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
EMBL:AADN02025813 EMBL:AADN02034856 EMBL:AADN02025812
IPI:IPI00581002 SMR:F2Z4K9 Ensembl:ENSGALT00000039511
Ensembl:ENSGALT00000039514 Ensembl:ENSGALT00000039520
Ensembl:ENSGALT00000039523 Ensembl:ENSGALT00000039614
Uniprot:F2Z4K9
Length = 76
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P79781 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9031 "Gallus gallus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002218 "activation of innate immune
response" evidence=TAS] [GO:0002224 "toll-like receptor signaling
pathway" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=TAS]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0034146
"toll-like receptor 5 signaling pathway" evidence=TAS] [GO:0034154
"toll-like receptor 7 signaling pathway" evidence=TAS] [GO:0035419
"activation of MAPK activity involved in innate immune response"
evidence=TAS] [GO:0035681 "toll-like receptor 15 signaling pathway"
evidence=TAS] [GO:0035682 "toll-like receptor 21 signaling pathway"
evidence=TAS] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 GO:GO:0005654
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0035419 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0007250
GO:GO:0002755 GO:GO:0034134 GO:GO:0034138 GO:GO:0034142
Reactome:REACT_102124 InterPro:IPR019954 eggNOG:COG5272
Reactome:REACT_115612 GO:GO:0019985 Reactome:REACT_147795
GO:GO:0035681 GO:GO:0034146 GO:GO:0035682 GO:GO:0034154
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 CTD:6233
OrthoDB:EOG4PZJ82 EMBL:U67931 IPI:IPI00818312 RefSeq:NP_990284.1
UniGene:Gga.39015 ProteinModelPortal:P79781 STRING:P79781
PRIDE:P79781 GeneID:395796 KEGG:gga:395796 InParanoid:P79781
NextBio:20815864 Uniprot:P79781
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|Q9PST8 [details] [associations]
symbol:UbI "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 UniGene:Gga.39142 EMBL:AADN02025813
EMBL:AADN02034856 EMBL:AADN02025812 EMBL:U57603 IPI:IPI00594278
STRING:Q9PST8 Ensembl:ENSGALT00000039509 Ensembl:ENSGALT00000039513
Ensembl:ENSGALT00000039519 Ensembl:ENSGALT00000039522
Ensembl:ENSGALT00000039613 InParanoid:Q9PST8 Uniprot:Q9PST8
Length = 71
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P62992 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0046872 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:KKVYTTP EMBL:AF058700 EMBL:AB098891 EMBL:BC102491
IPI:IPI00709961 PIR:A28144 RefSeq:NP_777203.1 UniGene:Bt.4286
ProteinModelPortal:P62992 SMR:P62992 STRING:P62992 PRIDE:P62992
Ensembl:ENSBTAT00000033091 GeneID:286839 KEGG:bta:286839 CTD:6233
GeneTree:ENSGT00550000074763 HOVERGEN:HBG079148 InParanoid:P62992
OrthoDB:EOG4PZJ82 NextBio:20806490 ArrayExpress:P62992
Uniprot:P62992
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P63048 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 EMBL:AB098957 EMBL:BC102248
IPI:IPI00786374 RefSeq:NP_001069831.1 UniGene:Bt.13691
ProteinModelPortal:P63048 SMR:P63048 STRING:P63048 PRIDE:P63048
Ensembl:ENSBTAT00000010176 GeneID:615199 KEGG:bta:615199 CTD:7311
HOVERGEN:HBG079132 InParanoid:P63048 OMA:QKYNCEK OrthoDB:EOG4V1726
NextBio:20899498 Uniprot:P63048
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F1PEZ4 [details] [associations]
symbol:RPS27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954 GO:GO:0022627
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP CTD:6233
GeneTree:ENSGT00550000074763 EMBL:AAEX03007531
RefSeq:NP_001239157.1 ProteinModelPortal:F1PEZ4
Ensembl:ENSCAFT00000036091 GeneID:474599 KEGG:cfa:474599
Uniprot:F1PEZ4
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P63050 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
CTD:7311 HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726
EMBL:AB032025 EMBL:AJ388512 RefSeq:NP_001121567.1 UniGene:Cfa.24507
UniGene:Cfa.3552 ProteinModelPortal:P63050 SMR:P63050 STRING:P63050
PRIDE:P63050 Ensembl:ENSCAFT00000023383 GeneID:403722
KEGG:cfa:403722 InParanoid:P63049 NextBio:20817225 Uniprot:P63050
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|J3QS39 [details] [associations]
symbol:UBB "Ubiquitin" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC093484 HGNC:HGNC:12463
ChiTaRS:UBB Ensembl:ENST00000578706 Uniprot:J3QS39
Length = 93
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P62979 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0015935 "small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006413
"translational initiation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=TAS] [GO:0006415 "translational termination"
evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019058 "viral infectious
cycle" evidence=TAS] [GO:0019083 "viral transcription"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
Reactome:REACT_6782 Reactome:REACT_13505 Reactome:REACT_81380
Reactome:REACT_216 Reactome:REACT_578 Reactome:REACT_2001
Reactome:REACT_97910 Reactome:REACT_71 Reactome:REACT_11123
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_17015
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0000184 GO:GO:0042981
GO:GO:0050852 GO:GO:0007254 GO:GO:0046872 GO:GO:0000082
GO:GO:0006413 GO:GO:0043123 GO:GO:0006281 GO:GO:0045944
GO:GO:0007219 GO:GO:0045087 GO:GO:0000187 GO:GO:0019221
Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008 GO:GO:0000122
GO:GO:0051436 GO:GO:0003735 GO:GO:0007179 GO:GO:0007220
Reactome:REACT_107772 GO:GO:0051092 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437 GO:GO:0006367
GO:GO:0016044 GO:GO:0042059 GO:GO:0061418 GO:GO:0030512
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666 GO:GO:0000080
GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954 eggNOG:COG5272
Reactome:REACT_24941 GO:GO:0030666 GO:GO:0070423 Reactome:REACT_383
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0046788 EMBL:AC012358 PDB:3PHD PDBsum:3PHD
GO:GO:0019083 InterPro:IPR019956 PRINTS:PR00348 PDB:3TBL
PDBsum:3TBL PDB:2KHW PDB:2KTF PDB:2L0F PDBsum:2KHW PDBsum:2KTF
PDBsum:2L0F PDB:2KWU PDB:2KWV PDBsum:2KWU PDBsum:2KWV KO:K02977
OMA:KKVYTTP HPA:HPA041344 CTD:6233 HOVERGEN:HBG079148
OrthoDB:EOG4PZJ82 EMBL:X63237 EMBL:S79522 EMBL:BC001392
EMBL:BC066293 EMBL:AB062071 EMBL:M10939 EMBL:AB007163
IPI:IPI00179330 RefSeq:NP_001129064.1 RefSeq:NP_001170884.1
RefSeq:NP_002945.1 UniGene:Hs.311640 UniGene:Hs.546292
UniGene:Hs.708727 PDB:2KOX PDB:2L0T PDB:2XK5 PDB:3AXC PDB:3K9P
PDB:3N30 PDB:3N32 PDB:3NHE PDB:3NOB PDB:3NS8 PDB:3PHW PDBsum:2KOX
PDBsum:2L0T PDBsum:2XK5 PDBsum:3AXC PDBsum:3K9P PDBsum:3N30
PDBsum:3N32 PDBsum:3NHE PDBsum:3NOB PDBsum:3NS8 PDBsum:3PHW
ProteinModelPortal:P62979 SMR:P62979 IntAct:P62979
MINT:MINT-1138719 STRING:P62979 PhosphoSite:P62979 DMDM:302393745
UCD-2DPAGE:P02248 PaxDb:P62979 PRIDE:P62979 DNASU:6233
Ensembl:ENST00000272317 Ensembl:ENST00000402285
Ensembl:ENST00000404735 GeneID:6233 KEGG:hsa:6233 UCSC:uc002ryk.3
GeneCards:GC02P055459 H-InvDB:HIX0161861 HGNC:HGNC:10417
HPA:CAB033319 MIM:191343 neXtProt:NX_P62979 PharmGKB:PA34821
InParanoid:P62979 PhylomeDB:P62979 ChiTaRS:RPS27A
EvolutionaryTrace:P62979 GenomeRNAi:6233 NextBio:24197
ArrayExpress:P62979 Bgee:P62979 CleanEx:HS_RPS27A
Genevestigator:P62979 GermOnline:ENSG00000143947 Uniprot:P62979
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P62987 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;NAS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=NAS;TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0006464 "cellular
protein modification process" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006413
"translational initiation" evidence=TAS] [GO:0006414 "translational
elongation" evidence=TAS] [GO:0006415 "translational termination"
evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019058 "viral infectious
cycle" evidence=TAS] [GO:0019083 "viral transcription"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_6782
Reactome:REACT_13505 Reactome:REACT_81380 Reactome:REACT_216
Reactome:REACT_578 Reactome:REACT_2001 Reactome:REACT_97910
Reactome:REACT_71 Reactome:REACT_11123 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_17015 InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005829 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0000184 GO:GO:0042981
GO:GO:0050852 GO:GO:0007254 GO:GO:0000082 GO:GO:0006413
GO:GO:0006412 GO:GO:0043123 GO:GO:0006281 GO:GO:0045944
GO:GO:0007219 GO:GO:0045087 GO:GO:0000187 GO:GO:0019221
Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008 GO:GO:0005840
GO:GO:0000122 GO:GO:0051436 GO:GO:0003735 GO:GO:0007179
GO:GO:0007220 Reactome:REACT_107772 GO:GO:0051092
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437
GO:GO:0006367 GO:GO:0016044 GO:GO:0042059 GO:GO:0061418
GO:GO:0030512 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0000080 GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954
eggNOG:COG5272 Reactome:REACT_24941 GO:GO:0030666 GO:GO:0070423
Reactome:REACT_383 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0046788 GO:GO:0019083
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC005253 KO:K02927 CTD:7311
HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:X56998
EMBL:X56997 EMBL:X56999 EMBL:AF348700 EMBL:Y00361 IPI:IPI00456429
PIR:S34428 RefSeq:NP_001029102.1 RefSeq:NP_003324.1 UniGene:Hs.5308
PDB:2LJ5 PDB:4HJK PDBsum:2LJ5 PDBsum:4HJK ProteinModelPortal:P62987
SMR:P62987 IntAct:P62987 MINT:MINT-1137632 STRING:P62987
PhosphoSite:P62987 DMDM:302393718 PaxDb:P62987 PRIDE:P62987
Ensembl:ENST00000430157 Ensembl:ENST00000442744 GeneID:7311
KEGG:hsa:7311 UCSC:uc002njr.3 GeneCards:GC19P018682 HGNC:HGNC:12458
HPA:HPA041344 MIM:191321 neXtProt:NX_P62987 InParanoid:P62987
ChiTaRS:UBA52 GenomeRNAi:7311 NextBio:28582 ArrayExpress:P62987
Bgee:P62987 CleanEx:HS_UBA52 Genevestigator:P62987
GermOnline:ENSG00000196084 Uniprot:P62987
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F2Z5U0 [details] [associations]
symbol:RPS27A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954 GO:GO:0022627
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 EMBL:FP326662 RefSeq:XP_003125184.1
RefSeq:XP_003125185.1 ProteinModelPortal:F2Z5U0 SMR:F2Z5U0
PRIDE:F2Z5U0 Ensembl:ENSSSCT00000026044 GeneID:100514637
KEGG:ssc:100514637 Uniprot:F2Z5U0
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P63053 [details] [associations]
symbol:UBA52 "Ubiquitin-60S ribosomal protein L40"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 GeneTree:ENSGT00700000104456 CTD:7311 HOVERGEN:HBG079132
OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:U72496 PIR:A29584
RefSeq:NP_999376.1 UniGene:Ssc.638 ProteinModelPortal:P63053
SMR:P63053 STRING:P63053 PRIDE:P63053 Ensembl:ENSSSCT00000015193
GeneID:397418 KEGG:ssc:397418 Uniprot:P63053
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>MGI|MGI:1925544 [details] [associations]
symbol:Rps27a "ribosomal protein S27A" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 MGI:MGI:1925544
Prosite:PS00299 GO:GO:0005829 GO:GO:0005654 GO:GO:0046872
GO:GO:0006412 Reactome:REACT_115202 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 Reactome:REACT_109335 Reactome:REACT_24972
GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 CTD:6233 OrthoDB:EOG4PZJ82
EMBL:AK018706 EMBL:BC002108 IPI:IPI00470152 RefSeq:NP_001029037.1
RefSeq:NP_077239.1 UniGene:Mm.180003 UniGene:Mm.458088
ProteinModelPortal:P62983 SMR:P62983 IntAct:P62983 STRING:P62983
PhosphoSite:P62983 PaxDb:P62983 PRIDE:P62983
Ensembl:ENSMUST00000102844 Ensembl:ENSMUST00000102845 GeneID:78294
KEGG:mmu:78294 HOVERGEN:HBG079153 InParanoid:P62983 NextBio:348635
Bgee:P62983 CleanEx:MM_RPS27A Genevestigator:P62991 Uniprot:P62983
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P62982 [details] [associations]
symbol:Rps27a "Ubiquitin-40S ribosomal protein S27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 RGD:620240 Prosite:PS00299 GO:GO:0005634
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP GermOnline:ENSRNOG00000004426
GermOnline:ENSRNOG00000019974 GermOnline:ENSRNOG00000028756
GermOnline:ENSRNOG00000032872 GermOnline:ENSRNOG00000034246
GermOnline:ENSRNOG00000037930 CTD:6233 OrthoDB:EOG4PZJ82
HOVERGEN:HBG079153 EMBL:X81839 IPI:IPI00190240 PIR:I52328
RefSeq:NP_112375.1 RefSeq:XP_003751469.1 RefSeq:XP_003752815.1
UniGene:Rn.106034 ProteinModelPortal:P62982 SMR:P62982
IntAct:P62982 STRING:P62982 PhosphoSite:P62982 PRIDE:P62982
Ensembl:ENSRNOT00000005872 Ensembl:ENSRNOT00000049535
GeneID:100912032 GeneID:81777 KEGG:rno:100912032 KEGG:rno:81777
InParanoid:P62982 NextBio:615609 ArrayExpress:P62982
Genevestigator:P62982 Uniprot:P62982
Length = 156
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P62986 [details] [associations]
symbol:Uba52 "Ubiquitin-60S ribosomal protein L40"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 RGD:68344 Prosite:PS00299 GO:GO:0005634 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 CTD:7311 HOVERGEN:HBG079132 OMA:QKYNCEK OrthoDB:EOG4V1726
EMBL:X82636 EMBL:U25064 IPI:IPI00969317 RefSeq:NP_113875.1
UniGene:Rn.110618 UniGene:Rn.4300 ProteinModelPortal:P62986
SMR:P62986 STRING:P62986 PhosphoSite:P62986 PRIDE:P62986
Ensembl:ENSRNOT00000027073 GeneID:64156 KEGG:rno:64156
InParanoid:P62986 NextBio:612790 ArrayExpress:P62986
Genevestigator:P62986 GermOnline:ENSRNOG00000004426
GermOnline:ENSRNOG00000019974 GermOnline:ENSRNOG00000028756
GermOnline:ENSRNOG00000032872 GermOnline:ENSRNOG00000034246
GermOnline:ENSRNOG00000037930 Uniprot:P62986
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>ZFIN|ZDB-GENE-030131-10018 [details] [associations]
symbol:rps27a "ribosomal protein S27a"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299
ZFIN:ZDB-GENE-030131-10018 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 HOGENOM:HOG000233943 EMBL:BX324134
EMBL:BC049478 IPI:IPI00510181 UniGene:Dr.75903 STRING:Q7ZU62
Ensembl:ENSDART00000129530 HOVERGEN:HBG057823 InParanoid:Q7ZU62
Uniprot:Q7ZU62
Length = 172
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 17 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 73
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 74 DYNIQKESTLHLVL 87
>ZFIN|ZDB-GENE-051023-7 [details] [associations]
symbol:uba52 "ubiquitin A-52 residue ribosomal
protein fusion product 1" species:7955 "Danio rerio" [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 ZFIN:ZDB-GENE-051023-7 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
CTD:7311 OMA:QKYNCEK OrthoDB:EOG4V1726 EMBL:CU693374 EMBL:BC105746
EMBL:BC107517 IPI:IPI00633761 RefSeq:NP_001032190.1
UniGene:Dr.35198 SMR:Q3B7P7 STRING:Q3B7P7
Ensembl:ENSDART00000060745 GeneID:641289 KEGG:dre:641289
HOVERGEN:HBG052927 InParanoid:Q3B7P7 NextBio:20901518
Uniprot:Q3B7P7
Length = 128
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>FB|FBgn0032725 [details] [associations]
symbol:Nedd8 "Nedd8" species:7227 "Drosophila melanogaster"
[GO:0031647 "regulation of protein stability" evidence=IMP]
[GO:0051438 "regulation of ubiquitin-protein ligase activity"
evidence=IMP] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IMP] [GO:0030162 "regulation of proteolysis"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0045116 "protein neddylation" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 EMBL:AE014134 GO:GO:0022008 GO:GO:0008283
GO:GO:0030431 GO:GO:0030162 GO:GO:0031647 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954 eggNOG:COG5272
GO:GO:0008589 GO:GO:0045116 GO:GO:0051438 InterPro:IPR019956
PRINTS:PR00348 CTD:4738 KO:K12158 GeneTree:ENSGT00660000095622
OMA:EPTDKVD EMBL:BT024445 RefSeq:NP_609919.1 UniGene:Dm.30848
ProteinModelPortal:Q9VJ33 SMR:Q9VJ33 IntAct:Q9VJ33 MINT:MINT-912533
STRING:Q9VJ33 PaxDb:Q9VJ33 PRIDE:Q9VJ33 EnsemblMetazoa:FBtr0081192
GeneID:35151 KEGG:dme:Dmel_CG10679 FlyBase:FBgn0032725
InParanoid:Q9VJ33 OrthoDB:EOG4HMGT4 PhylomeDB:Q9VJ33
GenomeRNAi:35151 NextBio:792117 Bgee:Q9VJ33 GermOnline:CG10679
Uniprot:Q9VJ33
Length = 84
Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G EI ++P+D V +K+ +E+ K+ P QQ LI +GK + D+ T A
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEE---KEGIPPQQQRLIFSGKQMNDDKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D KV L ++L+
Sbjct: 58 DYKVQGGSVLHLVLA 72
>GENEDB_PFALCIPARUM|PF13_0346 [details] [associations]
symbol:PF13_0346 "ubiquitin/ribosomal fusion
protein uba52 homologue, putative" species:5833 "Plasmodium
falciparum" [GO:0031386 "protein tag" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
HSSP:Q862M4 InterPro:IPR019954 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K02927 OMA:QKYNCEK
ProtClustDB:CLSZ2456930 RefSeq:XP_001350369.1
ProteinModelPortal:Q8ID50 SMR:Q8ID50 IntAct:Q8ID50
MINT:MINT-1633238 PRIDE:Q8ID50 EnsemblProtists:PF13_0346:mRNA
GeneID:814305 KEGG:pfa:PF13_0346 EuPathDB:PlasmoDB:PF3D7_1365900
Uniprot:Q8ID50
Length = 128
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|A4QND0 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
GeneTree:ENSGT00700000104456 HOVERGEN:HBG072205 CTD:8266
HOGENOM:HOG000006827 OMA:MEKGFSK eggNOG:NOG265285 EMBL:BC135438
RefSeq:NP_001096510.1 UniGene:Str.7441 ProteinModelPortal:A4QND0
SMR:A4QND0 STRING:A4QND0 Ensembl:ENSXETT00000015581
GeneID:100125140 KEGG:xtr:100125140 Xenbase:XB-GENE-6455973
Bgee:A4QND0 Uniprot:A4QND0
Length = 148
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M+LTVK LKG I+V DTV+AVK+ +E+ K P QQ L+ GK L DE LA
Sbjct: 1 MQLTVKALKGKEANIQVSEGDTVLAVKRLVEE---KLKVPVSQQRLLFRGKALADEHCLA 57
Query: 61 DNKVSEDGFLVVMLSK 76
+ L +M+ +
Sbjct: 58 HYSIGPGSRLNLMVKE 73
>UNIPROTKB|Q8ID50 [details] [associations]
symbol:PF13_0346 "60S ribosomal protein L40/UBI, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
HSSP:Q862M4 InterPro:IPR019954 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K02927 OMA:QKYNCEK
ProtClustDB:CLSZ2456930 RefSeq:XP_001350369.1
ProteinModelPortal:Q8ID50 SMR:Q8ID50 IntAct:Q8ID50
MINT:MINT-1633238 PRIDE:Q8ID50 EnsemblProtists:PF13_0346:mRNA
GeneID:814305 KEGG:pfa:PF13_0346 EuPathDB:PlasmoDB:PF3D7_1365900
Uniprot:Q8ID50
Length = 128
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|K7EQ16 [details] [associations]
symbol:RAD23A "UV excision repair protein RAD23 homolog A"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000449 InterPro:IPR004806 InterPro:IPR009060
InterPro:IPR015360 Pfam:PF00627 Pfam:PF09280 PRINTS:PR01839
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 SUPFAM:SSF46934
InterPro:IPR006636 SMART:SM00727 Gene3D:1.10.10.540
SUPFAM:SSF101238 HGNC:HGNC:9812 EMBL:AC092069
Ensembl:ENST00000590881 Uniprot:K7EQ16
Length = 150
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 260 QLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNE 319
Q++NEP G D+ D E ++ AI + IQ L+A+GF +LVI+A+ AC++NE
Sbjct: 80 QMLNEP-PGELADISDV-EGEVG-AIGEEAPQMNYIQ-LKALGFPESLVIQAYFACEKNE 135
Query: 320 ELAANYLLENAGDFED 335
LAAN+LL +F+D
Sbjct: 136 NLAANFLLSQ--NFDD 149
>UNIPROTKB|I3LET0 [details] [associations]
symbol:NEDD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0008104 GO:GO:0006357 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 InterPro:IPR019956
PRINTS:PR00348 GeneTree:ENSGT00660000095622 OMA:EPTDKVD
EMBL:CU019590 Ensembl:ENSSSCT00000031868 Uniprot:I3LET0
Length = 81
Score = 121 (47.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
L ++TL G EI ++P+D V +K+ +E+ K+ P QQ LI++GK + DE T AD
Sbjct: 3 LILQTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAADY 59
Query: 63 KVSEDGFLVVMLS 75
K+ L ++L+
Sbjct: 60 KILGGSVLHLVLA 72
>TAIR|locus:2197525 [details] [associations]
symbol:RUB1 "AT1G31340" species:3702 "Arabidopsis
thaliana" [GO:0006464 "cellular protein modification process"
evidence=ISS] [GO:0045116 "protein neddylation" evidence=TAS]
[GO:0009693 "ethylene biosynthetic process" evidence=IMP]
[GO:0009790 "embryo development" evidence=IGI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009733 "response to auxin stimulus" evidence=TAS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 GO:GO:0009693 GO:GO:0009733 GO:GO:0009790
EMBL:AC007654 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0045116 InterPro:IPR019956 PRINTS:PR00348
KO:K12158 EMBL:BT005749 EMBL:BT006110 EMBL:AK228591 IPI:IPI00544216
PIR:C86439 RefSeq:NP_564379.2 UniGene:At.25337 UniGene:At.30783
UniGene:At.43046 PDB:1BT0 PDBsum:1BT0 ProteinModelPortal:Q9SHE7
SMR:Q9SHE7 STRING:Q9SHE7 PaxDb:Q9SHE7 PRIDE:Q9SHE7 ProMEX:Q9SHE7
EnsemblPlants:AT1G31340.1 GeneID:840023 KEGG:ath:AT1G31340
TAIR:At1g31340 OMA:INIEPND PhylomeDB:Q9SHE7 ProtClustDB:CLSN2688712
EvolutionaryTrace:Q9SHE7 Genevestigator:Q9SHE7 GermOnline:AT1G31340
Uniprot:Q9SHE7
Length = 156
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 116 (45.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+ VKTL G EI ++P+DT+ +K+ +E+ K+ P QQ LI+ GK L D+ T D
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEE---KEGIPPVQQRLIYAGKQLADDKTAKDY 135
Query: 63 KVSEDGFLVVMLS 75
+ L ++L+
Sbjct: 136 NIEGGSVLHLVLA 148
>TAIR|locus:505006295 [details] [associations]
symbol:UBQ7 "AT2G35635" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006068 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 KO:K12158
ProtClustDB:CLSN2688712 EMBL:AK118678 EMBL:AY074850 EMBL:AY093802
IPI:IPI00531002 PIR:S55242 RefSeq:NP_565812.1 UniGene:At.37643
ProteinModelPortal:Q8RUC6 SMR:Q8RUC6 STRING:Q8RUC6 PaxDb:Q8RUC6
PRIDE:Q8RUC6 EnsemblPlants:AT2G35635.1 GeneID:818132
KEGG:ath:AT2G35635 TAIR:At2g35635 OMA:YRIKERV Genevestigator:Q8RUC6
GermOnline:AT2G35635 Uniprot:Q8RUC6
Length = 154
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+ VKTL G EI ++P+DT+ +K+ +E+ K+ P QQ LI+ GK L D+ T D
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEE---KEGIPPVQQRLIYAGKQLADDKTAKDY 135
Query: 63 KVSEDGFLVVMLS 75
+ L ++L+
Sbjct: 136 AIEGGSVLHLVLA 148
>TAIR|locus:2028005 [details] [associations]
symbol:AT1G23410 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0052541 "plant-type cell wall cellulose metabolic process"
evidence=RCA] [GO:0052546 "cell wall pectin metabolic process"
evidence=RCA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0005794 GO:GO:0046872 GO:GO:0006412 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 EMBL:AC007945 InterPro:IPR019954
eggNOG:COG5272 EMBL:AC005292 GO:GO:0022627 InterPro:IPR019956
PRINTS:PR00348 EMBL:BT024763 EMBL:AY085389 IPI:IPI00520784
PIR:H86367 RefSeq:NP_173755.1 UniGene:At.41552
ProteinModelPortal:P59271 SMR:P59271 STRING:P59271 PaxDb:P59271
PRIDE:P59271 EnsemblPlants:AT1G23410.1 GeneID:838949
KEGG:ath:AT1G23410 TAIR:At1g23410 KO:K02977 OMA:PGTFMAS
ProtClustDB:CLSN2682087 GermOnline:AT1G23410 Uniprot:P59271
Length = 156
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2053496 [details] [associations]
symbol:UBQ2 "ubiquitin extension protein 2" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 Prosite:PS00299 GenomeReviews:BA000014_GR
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412
EMBL:AC006921 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 EMBL:AC007135 GO:GO:0022625
UniGene:At.24656 UniGene:At.35280 InterPro:IPR019956 PRINTS:PR00348
KO:K02927 EMBL:J05508 EMBL:AF360311 EMBL:AY056360 EMBL:AK317456
IPI:IPI00533306 PIR:B36571 RefSeq:NP_565836.1 RefSeq:NP_566969.1
UniGene:At.23108 ProteinModelPortal:B9DHA6 SMR:B9DHA6 STRING:B9DHA6
PaxDb:B9DHA6 PRIDE:B9DHA6 EnsemblPlants:AT2G36170.1
EnsemblPlants:AT3G52590.1 GeneID:818189 GeneID:824425
KEGG:ath:AT2G36170 KEGG:ath:AT3G52590 GeneFarm:382 TAIR:At2g36170
ProtClustDB:CLSN2688722 Uniprot:B9DHA6
Length = 128
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2041459 [details] [associations]
symbol:UBQ6 "ubiquitin 6" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA;TAS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005794 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006412 EMBL:AC004411
GO:GO:0003735 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 ProtClustDB:CLSN2682087 EMBL:J05540
EMBL:AF375416 EMBL:AY142033 EMBL:AY143810 EMBL:AY088370
IPI:IPI00534346 PIR:D36571 RefSeq:NP_001189768.1 RefSeq:NP_566095.1
UniGene:At.27680 UniGene:At.75284 ProteinModelPortal:P59232
SMR:P59232 IntAct:P59232 STRING:P59232 PaxDb:P59232 PRIDE:P59232
EnsemblPlants:AT2G47110.1 EnsemblPlants:AT2G47110.2 GeneID:819323
KEGG:ath:AT2G47110 TAIR:At2g47110 OMA:KKVYTTP GermOnline:AT2G47110
Uniprot:P59232
Length = 157
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2079924 [details] [associations]
symbol:UBQ1 "ubiquitin extension protein 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0016567
"protein ubiquitination" evidence=TAS] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 EMBL:CP002686 GO:GO:0006412
GO:GO:0016567 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272 EMBL:AL050300
EMBL:AL353912 UniGene:At.24656 UniGene:At.35280 InterPro:IPR019956
PRINTS:PR00348 KO:K02927 IPI:IPI00533306 RefSeq:NP_565836.1
RefSeq:NP_566969.1 UniGene:At.23108 EnsemblPlants:AT2G36170.1
EnsemblPlants:AT3G52590.1 GeneID:818189 GeneID:824425
KEGG:ath:AT2G36170 KEGG:ath:AT3G52590 ProtClustDB:CLSN2688722
EMBL:J05507 EMBL:AY035148 EMBL:AY059080 EMBL:AY085820 EMBL:Z29051
PIR:A36571 ProteinModelPortal:Q42202 SMR:Q42202 STRING:Q42202
PaxDb:Q42202 PRIDE:Q42202 GeneFarm:383 TAIR:At3g52590
Uniprot:Q42202
Length = 128
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2098003 [details] [associations]
symbol:UBQ5 "ubiquitin 5" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272 EMBL:AL138651
GO:GO:0022627 UniGene:At.24823 InterPro:IPR019956 PRINTS:PR00348
UniGene:At.17613 KO:K02977 ProtClustDB:CLSN2682087 EMBL:J05539
EMBL:AY052219 EMBL:AY139810 EMBL:AK226902 EMBL:AY084978
IPI:IPI00534462 PIR:C36571 RefSeq:NP_191784.1 UniGene:At.333
ProteinModelPortal:P59233 SMR:P59233 IntAct:P59233 STRING:P59233
PaxDb:P59233 PRIDE:P59233 EnsemblPlants:AT3G62250.1 GeneID:825398
KEGG:ath:AT3G62250 TAIR:At3g62250 OMA:FYKIDGS Genevestigator:P59233
GermOnline:AT3G62250 Uniprot:P59233
Length = 157
Score = 120 (47.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>WB|WBGene00003587 [details] [associations]
symbol:ned-8 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0002009 GO:GO:0005737
GO:GO:0040010 GO:GO:0006915 GO:GO:0040011 GO:GO:0040035
GO:GO:0040015 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0040025
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K12158 EMBL:Z78420 PIR:T22249
RefSeq:NP_492717.1 ProteinModelPortal:Q93725 SMR:Q93725
IntAct:Q93725 STRING:Q93725 PaxDb:Q93725 EnsemblMetazoa:F45H11.2
GeneID:172910 KEGG:cel:CELE_F45H11.2 UCSC:F45H11.2 CTD:172910
WormBase:F45H11.2 GeneTree:ENSGT00660000095622 InParanoid:Q93725
OMA:EPTDKVD NextBio:877495 Uniprot:Q93725
Length = 77
Score = 119 (46.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G E+ ++P+D V +K+ +E+ K+ P QQ LI GK + D+ T A
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEE---KEGIPPPQQRLIFAGKQMNDDKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D KV L ++L+
Sbjct: 58 DYKVLGGSVLHLVLA 72
>UNIPROTKB|Q93725 [details] [associations]
symbol:ned-8 "NEDD8" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
GO:GO:0002009 GO:GO:0005737 GO:GO:0040010 GO:GO:0006915
GO:GO:0040011 GO:GO:0040035 GO:GO:0040015 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0040025 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 KO:K12158
EMBL:Z78420 PIR:T22249 RefSeq:NP_492717.1 ProteinModelPortal:Q93725
SMR:Q93725 IntAct:Q93725 STRING:Q93725 PaxDb:Q93725
EnsemblMetazoa:F45H11.2 GeneID:172910 KEGG:cel:CELE_F45H11.2
UCSC:F45H11.2 CTD:172910 WormBase:F45H11.2
GeneTree:ENSGT00660000095622 InParanoid:Q93725 OMA:EPTDKVD
NextBio:877495 Uniprot:Q93725
Length = 77
Score = 119 (46.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G E+ ++P+D V +K+ +E+ K+ P QQ LI GK + D+ T A
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEE---KEGIPPPQQRLIFAGKQMNDDKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D KV L ++L+
Sbjct: 58 DYKVLGGSVLHLVLA 72
>UNIPROTKB|F5GZ39 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015016 ProteinModelPortal:F5GZ39 SMR:F5GZ39
Ensembl:ENST00000542416 ArrayExpress:F5GZ39 Bgee:F5GZ39
Uniprot:F5GZ39
Length = 61
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKV 64
D +
Sbjct: 58 DYNI 61
>UNIPROTKB|Q0D261 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:8355
"Xenopus laevis" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOVERGEN:HBG072205 EMBL:BC094264 EMBL:BC115000 EMBL:BC122490
UniGene:Xl.6137 ProteinModelPortal:Q0D261 SMR:Q0D261
Xenbase:XB-GENE-6253458 Uniprot:Q0D261
Length = 148
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M+LTVK LKG I+V DTV+AVK+ +E+ K P QQ L+ GK L DE L+
Sbjct: 1 MQLTVKALKGKEAHIQVSEGDTVLAVKRLVEE---KLQVPVSQQRLLFRGKSLADEHCLS 57
Query: 61 DNKVSEDGFLVVML 74
+ L +M+
Sbjct: 58 HYSIGPGSRLNLMV 71
>POMBASE|SPAC11G7.04 [details] [associations]
symbol:ubi1 "ribosomal-ubiquitin fusion protein Ubi1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020
SMART:SM00213 PomBase:SPAC1805.12c PomBase:SPAC11G7.04
Prosite:PS00299 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0042254 GO:GO:0016567
GO:GO:0003735 GO:GO:0002181 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
PIR:T37547 RefSeq:NP_593923.1 RefSeq:NP_594398.1
ProteinModelPortal:P0CH06 EnsemblFungi:SPAC11G7.04.1
EnsemblFungi:SPAC1805.12c.1 GeneID:2541768 GeneID:2542428
KEGG:spo:SPAC11G7.04 KEGG:spo:SPAC1805.12c KO:K02927
OrthoDB:EOG48WGBH NextBio:20802859 Uniprot:P0CH06
Length = 128
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>POMBASE|SPAC1805.12c [details] [associations]
symbol:uep1 "ribosomal-ubiquitin fusion protein Ubi2"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISO] InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240
Pfam:PF01020 SMART:SM00213 PomBase:SPAC1805.12c PomBase:SPAC11G7.04
Prosite:PS00299 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006281 GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348 PIR:T37547
RefSeq:NP_593923.1 RefSeq:NP_594398.1 EnsemblFungi:SPAC11G7.04.1
EnsemblFungi:SPAC1805.12c.1 GeneID:2541768 GeneID:2542428
KEGG:spo:SPAC11G7.04 KEGG:spo:SPAC1805.12c KO:K02927
OrthoDB:EOG48WGBH NextBio:20802859 ProteinModelPortal:P0CH07
Uniprot:P0CH07
Length = 128
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>POMBASE|SPAC589.10c [details] [associations]
symbol:SPAC589.10c "ribosomal-ubiquitin fusion protein
Ubi5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM] [GO:0042254
"ribosome biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 PomBase:SPAC589.10c Prosite:PS00299
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0006281 GO:GO:0042254
GO:GO:0016567 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP
HOGENOM:HOG000233943 OrthoDB:EOG4F21CP RefSeq:NP_594058.1
ProteinModelPortal:P0C8R3 SMR:P0C8R3 STRING:P0C8R3
EnsemblFungi:SPAC589.10c.1 GeneID:2542138 KEGG:spo:SPAC589.10c
NextBio:20803210 Uniprot:P0C8R3
Length = 150
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>POMBASE|SPAC6G10.11c [details] [associations]
symbol:ubi3 "ribosomal-ubiquitin fusion protein Ubi3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 PomBase:SPAC6G10.11c Prosite:PS00299
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006412 GO:GO:0006281 GO:GO:0042254 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348
KO:K02977 OMA:FYKIDGS HOGENOM:HOG000233943 PIR:T39061
RefSeq:NP_594108.1 ProteinModelPortal:P0C016 STRING:P0C016
PRIDE:P0C016 EnsemblFungi:SPAC6G10.11c.1 GeneID:2541445
KEGG:spo:SPAC6G10.11c OrthoDB:EOG4F21CP NextBio:20802547
Uniprot:P0C016
Length = 150
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>SGD|S000001410 [details] [associations]
symbol:RPL40A "Ubiquitin-ribosomal 60S subunit protein L40A
fusion protein" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IMP] [GO:0031386 "protein tag"
evidence=ISS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
SGD:S000001410 Prosite:PS00299 GO:GO:0005634 EMBL:BK006942
GO:GO:0006281 GO:GO:0042254 GO:GO:0016567 GO:GO:0003735
GO:GO:0002181 EMBL:Z38059 InterPro:IPR019955 PROSITE:PS50053
PDB:4B6A PDBsum:4B6A GO:GO:0031386 InterPro:IPR019954 GO:GO:0022625
InterPro:IPR019956 PRINTS:PR00348 KO:K15902 RefSeq:NP_878113.4
GeneID:1500489 KEGG:sce:YKR095W-A PDB:3IZS PDB:3U5E PDB:3U5I
PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I KO:K02927 OrthoDB:EOG48WGBH
EMBL:X05728 EMBL:X05729 PIR:A29456 RefSeq:NP_012118.1
RefSeq:NP_013020.3 ProteinModelPortal:P0CH08 SMR:P0CH08
SWISS-2DPAGE:P61864 EnsemblFungi:YIL148W EnsemblFungi:YKR094C
GeneID:853969 GeneID:854658 KEGG:sce:YIL148W KEGG:sce:YKR094C
NextBio:975410 ArrayExpress:P0CH08 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W Uniprot:P0CH08
Length = 128
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>SGD|S000001802 [details] [associations]
symbol:RPL40B "Ubiquitin-ribosomal 60S subunit protein L40B
fusion protein" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031386 "protein tag" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] InterPro:IPR000626 InterPro:IPR001975 Pfam:PF00240
Pfam:PF01020 SMART:SM00213 SGD:S000001802 Prosite:PS00299
GO:GO:0005739 GO:GO:0005634 GO:GO:0006281 GO:GO:0042254
EMBL:BK006944 GO:GO:0016567 GO:GO:0003735 GO:GO:0002181
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348 KO:K15902
EMBL:X73541 RefSeq:NP_878113.4 GeneID:1500489 KEGG:sce:YKR095W-A
KO:K02927 OrthoDB:EOG48WGBH PIR:A29456 RefSeq:NP_012118.1
RefSeq:NP_013020.3 SWISS-2DPAGE:P61864 EnsemblFungi:YIL148W
EnsemblFungi:YKR094C GeneID:853969 GeneID:854658 KEGG:sce:YIL148W
KEGG:sce:YKR094C NextBio:975410 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W EMBL:Z28319 ProteinModelPortal:P0CH09 SMR:P0CH09
GeneTree:ENSGT00700000104456 ArrayExpress:P0CH09 Uniprot:P0CH09
Length = 128
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>SGD|S000004157 [details] [associations]
symbol:RPS31 "Fusion protein cleaved to yield ribosomal
protein S31 and ubiquitin" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000028 "ribosomal
small subunit assembly" evidence=IMP] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IC] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0031386 "protein tag"
evidence=IMP] [GO:0042254 "ribosome biogenesis" evidence=IMP]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0002109
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, LSU-rRNA,5S)" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 SGD:S000004157
Prosite:PS00299 GO:GO:0005634 GO:GO:0046872 GO:GO:0006281
EMBL:BK006945 GO:GO:0003735 GO:GO:0002181 InterPro:IPR019955
PROSITE:PS50053 EMBL:U17246 GO:GO:0000028 GO:GO:0031386
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0022627 PDB:3U5C PDB:3U5G
PDBsum:3U5C PDBsum:3U5G InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP SWISS-2DPAGE:P61864 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W HOGENOM:HOG000224977
GeneTree:ENSGT00550000074763 OrthoDB:EOG4F21CP EMBL:X05730
PIR:C29456 RefSeq:NP_013268.1 ProteinModelPortal:P05759 SMR:P05759
DIP:DIP-6389N IntAct:P05759 MINT:MINT-396408 STRING:P05759
PaxDb:P05759 PRIDE:P05759 EnsemblFungi:YLR167W GeneID:850864
KEGG:sce:YLR167W NextBio:967191 ArrayExpress:P05759 GO:GO:0002109
Uniprot:P05759
Length = 152
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>WB|WBGene00006728 [details] [associations]
symbol:ubq-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR000626 InterPro:IPR001975
Pfam:PF00240 Pfam:PF01020 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 EMBL:Z82083 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K02927 GeneTree:ENSGT00700000104456
OMA:QKYNCEK EMBL:L31492 PIR:T27638 RefSeq:NP_499695.1
ProteinModelPortal:P49632 SMR:P49632 STRING:P49632 PaxDb:P49632
EnsemblMetazoa:ZK1010.1.1 EnsemblMetazoa:ZK1010.1.2 GeneID:176718
KEGG:cel:CELE_ZK1010.1 UCSC:ZK1010.1.1 CTD:176718 WormBase:ZK1010.1
NextBio:893724 Uniprot:P49632
Length = 128
Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>ASPGD|ASPL0000072359 [details] [associations]
symbol:ubi1 species:162425 "Emericella nidulans"
[GO:0031386 "protein tag" evidence=IEA;ISA] [GO:0003735 "structural
constituent of ribosome" evidence=ISA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0002109 "maturation of SSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000626 InterPro:IPR002906
Pfam:PF00240 Pfam:PF01599 SMART:SM00213 Prosite:PS00299
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BN001303
InterPro:IPR019955 PROSITE:PS50053 EMBL:AACD01000084
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 KO:K02977
OMA:KKVYTTP HOGENOM:HOG000233943 PIR:S62680 RefSeq:XP_662476.1
ProteinModelPortal:G5EB17 SMR:G5EB17 EnsemblFungi:CADANIAT00005533
GeneID:2872673 KEGG:ani:AN4872.2 Uniprot:G5EB17
Length = 154
Score = 117 (46.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2014440 [details] [associations]
symbol:AT1G53930 "AT1G53930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006464 "cellular protein modification
process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC006577 InterPro:IPR019955
PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 KO:K08770
EMBL:DQ056497 IPI:IPI00546652 PIR:F96579 RefSeq:NP_175796.1
UniGene:At.62377 ProteinModelPortal:Q9SYE9 SMR:Q9SYE9 PaxDb:Q9SYE9
PRIDE:Q9SYE9 EnsemblPlants:AT1G53930.1 GeneID:841831
KEGG:ath:AT1G53930 TAIR:At1g53930 InParanoid:Q9SYE9 OMA:MINLEVD
PhylomeDB:Q9SYE9 ProtClustDB:CLSN2914531 Genevestigator:Q9SYE9
Uniprot:Q9SYE9
Length = 158
Score = 117 (46.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + +KTL G + V+ DT+ +K I+D QG P QQ LI GK L+D TLA
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQG---IPVDQQRLIFKGKQLEDGLTLA 142
Query: 61 DNKVSEDGFL 70
D + D L
Sbjct: 143 DYNIQNDSIL 152
>UNIPROTKB|J3QKN0 [details] [associations]
symbol:UBB "Ubiquitin" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC093484 HGNC:HGNC:12463
ChiTaRS:UBB Ensembl:ENST00000577640 Uniprot:J3QKN0
Length = 206
Score = 126 (49.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>DICTYBASE|DDB_G0280755 [details] [associations]
symbol:ubqB "ubiquitin/ribosomal protein L40 fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000626
InterPro:IPR001975 Pfam:PF00240 Pfam:PF01020 SMART:SM00213
dictyBase:DDB_G0280755 Prosite:PS00299 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348 EMBL:AAFI02000038
KO:K02927 OMA:QKYNCEK EMBL:X07210 EMBL:M23749 EMBL:X04702
PIR:S00357 RefSeq:XP_641020.1 ProteinModelPortal:P14794
STRING:P14794 PRIDE:P14794 EnsemblProtists:DDB0214925
GeneID:8622722 KEGG:ddi:DDB_G0280755 ProtClustDB:CLSZ2456930
Uniprot:P14794
Length = 128
Score = 112 (44.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P0CG47 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9606 "Homo sapiens"
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000080 "G1
phase of mitotic cell cycle" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0006977 "DNA damage response,
signal transduction by p53 class mediator resulting in cell cycle
arrest" evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0032480 "negative regulation of type I interferon
production" evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_6782
Reactome:REACT_13505 Reactome:REACT_81380 Reactome:REACT_216
Reactome:REACT_578 Reactome:REACT_2001 Reactome:REACT_97910
Reactome:REACT_71 Reactome:REACT_11123 Reactome:REACT_21257
Reactome:REACT_6850 InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Reactome:REACT_120956 Prosite:PS00299 GO:GO:0005829 GO:GO:0005886
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0007173 GO:GO:0008543 GO:GO:0016071
GO:GO:0048011 Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0050852
GO:GO:0007254 GO:GO:0000082 GO:GO:0043123 GO:GO:0006281
GO:GO:0045944 GO:GO:0007219 GO:GO:0045087 GO:GO:0000187
GO:GO:0019221 Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008
GO:GO:0000122 GO:GO:0051436 GO:GO:0007179 GO:GO:0007220
Reactome:REACT_107772 GO:GO:0051092 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437 GO:GO:0006367
GO:GO:0016044 GO:GO:0042059 GO:GO:0061418 GO:GO:0030512
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666 GO:GO:0000080
GO:GO:0032480 GO:GO:0007249 InterPro:IPR019954 Reactome:REACT_24941
GO:GO:0030666 GO:GO:0070423 Reactome:REACT_383 GO:GO:0046788
InterPro:IPR019956 PRINTS:PR00348 HPA:HPA041344 EMBL:AC093484
CTD:7314 OrthoDB:EOG4WDDB6 EMBL:X04803 EMBL:AB089617 EMBL:BC000379
EMBL:BC009301 EMBL:BC015127 EMBL:BC026301 EMBL:BC031027
EMBL:BC046123 IPI:IPI00719280 PIR:A26437 RefSeq:NP_061828.1
UniGene:Hs.356190 UniGene:Hs.740365 ProteinModelPortal:P0CG47
SMR:P0CG47 IntAct:P0CG47 PhosphoSite:P0CG47 DMDM:302595875
PRIDE:P0CG47 DNASU:7314 Ensembl:ENST00000302182
Ensembl:ENST00000395837 Ensembl:ENST00000395839 GeneID:7314
KEGG:hsa:7314 UCSC:uc001ugw.3 GeneCards:GC17P016301 HGNC:HGNC:12463
HPA:CAB013048 HPA:HPA049132 MIM:191339 neXtProt:NX_P0CG47 KO:K04551
OMA:TIGCVNI PhylomeDB:P0CG47 ChiTaRS:UBB GenomeRNAi:7314
NextBio:28592 ArrayExpress:P0CG47 Bgee:P0CG47
GermOnline:ENSG00000170315 Uniprot:P0CG47
Length = 229
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|A7U5U2 [details] [associations]
symbol:UBB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097009 "energy homeostasis" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0060613 "fat
pad development" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0010992 "ubiquitin homeostasis" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 HOVERGEN:HBG000057 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 CTD:7314 KO:K04551 OMA:TIGCVNI
EMBL:CU927969 EMBL:EF688558 EMBL:EF688559 RefSeq:NP_001098779.1
UniGene:Ssc.18568 SMR:A7U5U2 STRING:A7U5U2
Ensembl:ENSSSCT00000019628 GeneID:100125968 KEGG:ssc:100125968
Uniprot:A7U5U2
Length = 229
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F1PDG4 [details] [associations]
symbol:UBB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097009 "energy homeostasis" evidence=IEA]
[GO:0072520 "seminiferous tubule development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0021888
"hypothalamus gonadotrophin-releasing hormone neuron development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GeneTree:ENSGT00550000074658 InterPro:IPR019956
PRINTS:PR00348 CTD:7314 KO:K04551 EMBL:AAEX03003688
RefSeq:XP_003434677.1 RefSeq:XP_536651.2 ProteinModelPortal:F1PDG4
Ensembl:ENSCAFT00000036025 GeneID:479513 KEGG:cfa:479513
OMA:ITLRVEP Uniprot:F1PDG4
Length = 229
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 124 (48.7 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MPIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F1P0H5 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9031 "Gallus gallus" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 Prosite:PS00299 GO:GO:0006412
GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GO:GO:0022627 InterPro:IPR019956 PRINTS:PR00348 OMA:KKVYTTP
GeneTree:ENSGT00550000074763 IPI:IPI00818312 EMBL:AADN02046834
EMBL:AADN02046833 Ensembl:ENSGALT00000040431 ArrayExpress:F1P0H5
Uniprot:F1P0H5
Length = 179
Score = 120 (47.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 79
Query: 61 DNKVSE 66
D + +
Sbjct: 80 DYNIQQ 85
>UNIPROTKB|P0CG62 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007144 "female meiosis I" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0010992
"ubiquitin homeostasis" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=IEA] [GO:0002218 "activation of innate immune
response" evidence=TAS] [GO:0002224 "toll-like receptor signaling
pathway" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=TAS]
[GO:0019985 "translesion synthesis" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0034146
"toll-like receptor 5 signaling pathway" evidence=TAS] [GO:0034154
"toll-like receptor 7 signaling pathway" evidence=TAS] [GO:0035419
"activation of MAPK activity involved in innate immune response"
evidence=TAS] [GO:0035681 "toll-like receptor 15 signaling pathway"
evidence=TAS] [GO:0035682 "toll-like receptor 21 signaling pathway"
evidence=TAS] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0005737 GO:GO:0005654 GO:GO:0035419
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0007250 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 Reactome:REACT_102124
InterPro:IPR019954 Reactome:REACT_115612 GO:GO:0019985
Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146 GO:GO:0035682
GO:GO:0034154 InterPro:IPR019956 PRINTS:PR00348 EMBL:M14693
EMBL:X02650 IPI:IPI00821431 UniGene:Gga.39142
ProteinModelPortal:P0CG62 SMR:P0CG62 PRIDE:P0CG62
ArrayExpress:P0CG62 Uniprot:P0CG62
Length = 305
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P0CG53 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
[GO:0072520 "seminiferous tubule development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0021888
"hypothalamus gonadotrophin-releasing hormone neuron development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 EMBL:Z18245 EMBL:BC114001
EMBL:M62429 EMBL:AB098769 EMBL:AB099044 EMBL:AB099083
IPI:IPI00786471 PIR:I45964 PIR:S29853 RefSeq:NP_776558.1
UniGene:Bt.111403 UniGene:Bt.2878 IntAct:P0CG53 PRIDE:P0CG53
Ensembl:ENSBTAT00000022919 GeneID:281370 KEGG:bta:281370 CTD:7314
OMA:VHENTRR OrthoDB:EOG4WDDB6 NextBio:20805375 ArrayExpress:P0CG53
Uniprot:P0CG53
Length = 305
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|Q96C32 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309
UniGene:Hs.520348 HGNC:HGNC:12468 ChiTaRS:UBC EMBL:BC014880
IPI:IPI00793729 SMR:Q96C32 IntAct:Q96C32 MINT:MINT-256356
STRING:Q96C32 Ensembl:ENST00000538617 Uniprot:Q96C32
Length = 305
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>MGI|MGI:98888 [details] [associations]
symbol:Ubb "ubiquitin B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007144 "female meiosis I" evidence=IMP] [GO:0008584 "male
gonad development" evidence=IMP] [GO:0008585 "female gonad
development" evidence=IMP] [GO:0010992 "ubiquitin homeostasis"
evidence=IGI;IMP] [GO:0021888 "hypothalamus gonadotrophin-releasing
hormone neuron development" evidence=IMP] [GO:0060612 "adipose
tissue development" evidence=IMP] [GO:0060613 "fat pad development"
evidence=IMP] [GO:0072520 "seminiferous tubule development"
evidence=IMP] [GO:0097009 "energy homeostasis" evidence=IMP]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 MGI:MGI:98888
Prosite:PS00299 GO:GO:0005829 GO:GO:0005654 GO:GO:0008585
Reactome:REACT_115202 GO:GO:0072520 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0060613 InterPro:IPR019954
Reactome:REACT_109335 Reactome:REACT_24972 GO:GO:0007141
GO:GO:0007144 GO:GO:0010992 InterPro:IPR019956 PRINTS:PR00348
GO:GO:0097009 REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 Genevestigator:P62991 CTD:7314
OMA:VHENTRR KO:K04551 ChiTaRS:UBB EMBL:X51703 EMBL:AK012443
EMBL:AK003190 EMBL:AK013873 EMBL:BC019850 IPI:IPI00139518
PIR:S12583 RefSeq:NP_035794.1 UniGene:Mm.282093 UniGene:Mm.371592
ProteinModelPortal:P0CG49 SMR:P0CG49 PhosphoSite:P0CG49
PRIDE:P0CG49 Ensembl:ENSMUST00000019649 GeneID:22187 KEGG:mmu:22187
NextBio:302157 Bgee:P0CG49 GO:GO:0021888 Uniprot:P0CG49
Length = 305
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P0CG51 [details] [associations]
symbol:Ubb "Polyubiquitin-B" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 RGD:621562 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 UniGene:Rn.110618
GermOnline:ENSRNOG00000004426 GermOnline:ENSRNOG00000019974
GermOnline:ENSRNOG00000028756 GermOnline:ENSRNOG00000032872
GermOnline:ENSRNOG00000034246 GermOnline:ENSRNOG00000037930
CTD:7314 KO:K04551 EMBL:D16554 EMBL:BC060312 EMBL:BC070919
IPI:IPI00882520 RefSeq:NP_620250.1 UniGene:Rn.1253 UniGene:Rn.3761
ProteinModelPortal:P0CG51 SMR:P0CG51 PhosphoSite:P0CG51
PRIDE:P0CG51 GeneID:192255 KEGG:rno:192255 NextBio:622912
Uniprot:P0CG51
Length = 305
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|E1B9K1 [details] [associations]
symbol:UBC "Ubiquitin" species:9913 "Bos taurus"
[GO:0097009 "energy homeostasis" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0060613 "fat
pad development" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0010992 "ubiquitin homeostasis" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0002020 "protease binding" evidence=IEA] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 OMA:TIGCVNI EMBL:DAAA02045204
IPI:IPI00824192 Ensembl:ENSBTAT00000046011 ArrayExpress:E1B9K1
Uniprot:E1B9K1
Length = 305
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>DICTYBASE|DDB_G0276765 [details] [associations]
symbol:ubqC "ubiquitin/ribosomal protein S27a fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240
Pfam:PF01599 SMART:SM00213 dictyBase:DDB_G0276765 Prosite:PS00299
GO:GO:0005634 GO:GO:0046872 GO:GO:0006412 GenomeReviews:CM000151_GR
GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000019 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 KO:K02977 OMA:KKVYTTP EMBL:M23750
PIR:E34080 RefSeq:XP_642815.1 ProteinModelPortal:P14797
STRING:P14797 PRIDE:P14797 EnsemblProtists:DDB0191355
GeneID:8620678 KEGG:ddi:DDB_G0276765 ProtClustDB:CLSZ2430846
Uniprot:P14797
Length = 154
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ +KTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFIKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2827139 [details] [associations]
symbol:UBQ12 "AT1G55060" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 EMBL:AC073944 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 UniGene:At.25274 UniGene:At.47590
IPI:IPI00539232 RefSeq:NP_564675.1 UniGene:At.49314
ProteinModelPortal:Q3E7K8 SMR:Q3E7K8 STRING:Q3E7K8 PaxDb:Q3E7K8
PRIDE:Q3E7K8 EnsemblPlants:AT1G55060.1 GeneID:841949
KEGG:ath:AT1G55060 TAIR:At1g55060 InParanoid:Q3E7K8 OMA:HEDGRTL
PhylomeDB:Q3E7K8 ProtClustDB:CLSN2688814 Genevestigator:Q3E7K8
Uniprot:Q3E7K8
Length = 230
Score = 122 (48.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ +KTL G + V+ SDT+ VK I+D++G P Q LI GK L+D TLA
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEG---IPPDQHRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D V ED L ++L
Sbjct: 58 DYNVQEDSTLHLLL 71
Score = 117 (46.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ +K I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
>DICTYBASE|DDB_G0278711 [details] [associations]
symbol:nedd8 "ubiquitin-like protein Nedd8"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0051438 "regulation of
ubiquitin-protein ligase activity" evidence=ISS] [GO:0045116
"protein neddylation" evidence=ISS] [GO:0031647 "regulation of
protein stability" evidence=ISS] [GO:0030162 "regulation of
proteolysis" evidence=ISS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 dictyBase:DDB_G0278711 Prosite:PS00299 GO:GO:0005829
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0008283
EMBL:AAFI02000023 GO:GO:0030162 GO:GO:0031647 GO:GO:0019005
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0045116 GO:GO:0051438 InterPro:IPR019956
PRINTS:PR00348 KO:K12158 OMA:EPTDKVD RefSeq:XP_642449.2 HSSP:Q15843
ProteinModelPortal:Q54XV3 SMR:Q54XV3 STRING:Q54XV3
EnsemblProtists:DDB0238041 GeneID:8621655 KEGG:ddi:DDB_G0278711
Uniprot:Q54XV3
Length = 77
Score = 105 (42.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G EI + P+D + +K+ +E+ K+ P QQ LI GK + D+ +
Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEE---KEGIPPSQQRLIFGGKQMGDDKPAS 57
Query: 61 DNKVSEDGFLVVMLS 75
+ + L ++L+
Sbjct: 58 EYSIEGGSVLHLVLA 72
>UNIPROTKB|F5H041 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:AC126309 HGNC:HGNC:12468
ChiTaRS:UBC IPI:IPI01015749 SMR:F5H041 Ensembl:ENST00000541046
Ensembl:ENST00000546120 Uniprot:F5H041
Length = 609
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPSDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>CGD|CAL0001506 [details] [associations]
symbol:UBI3 species:5476 "Candida albicans" [GO:0042254
"ribosome biogenesis" evidence=IGI] [GO:0003735 "structural
constituent of ribosome" evidence=IGI;ISS] [GO:0005576
"extracellular region" evidence=IDA] [GO:0031386 "protein tag"
evidence=IGI;ISS] [GO:0016567 "protein ubiquitination"
evidence=IGI;ISS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0000028
"ribosomal small subunit assembly" evidence=IEA] [GO:0002109
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, LSU-rRNA,5S)" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
CGD:CAL0001506 Prosite:PS00299 GO:GO:0005576 GO:GO:0006412
GO:GO:0042254 GO:GO:0016567 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
EMBL:AACQ01000086 EMBL:AACQ01000085 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 RefSeq:XP_715397.1 RefSeq:XP_715467.1
ProteinModelPortal:Q5A109 SMR:Q5A109 STRING:Q5A109 GeneID:3642848
GeneID:3642934 KEGG:cal:CaO19.10599 KEGG:cal:CaO19.3087
Uniprot:Q5A109
Length = 193
Score = 118 (46.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 43 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 99
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 100 DYNIQKESTLHLVL 113
>UNIPROTKB|Q5A109 [details] [associations]
symbol:UBI3 "Ubiquitin-ribosomal protein fusion S27a"
species:237561 "Candida albicans SC5314" [GO:0003735 "structural
constituent of ribosome" evidence=IGI] [GO:0005576 "extracellular
region" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IGI] [GO:0031386 "protein tag" evidence=IGI] [GO:0042254
"ribosome biogenesis" evidence=IGI] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
CGD:CAL0001506 Prosite:PS00299 GO:GO:0005576 GO:GO:0006412
GO:GO:0042254 GO:GO:0016567 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
EMBL:AACQ01000086 EMBL:AACQ01000085 InterPro:IPR019956
PRINTS:PR00348 KO:K02977 RefSeq:XP_715397.1 RefSeq:XP_715467.1
ProteinModelPortal:Q5A109 SMR:Q5A109 STRING:Q5A109 GeneID:3642848
GeneID:3642934 KEGG:cal:CaO19.10599 KEGG:cal:CaO19.3087
Uniprot:Q5A109
Length = 193
Score = 118 (46.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 43 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 99
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 100 DYNIQKESTLHLVL 113
>UNIPROTKB|F1NGE2 [details] [associations]
symbol:UBB "Polyubiquitin-B" species:9031 "Gallus gallus"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
OMA:CSDNIEN EMBL:AADN02025813 EMBL:AADN02025812 IPI:IPI01017358
Ensembl:ENSGALT00000039525 ArrayExpress:F1NGE2 Uniprot:F1NGE2
Length = 459
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 383 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 439
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 440 DYNIQKESTLHLVL 453
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 307 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 363
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 364 DYNIQKESTLHLVL 377
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 154 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 210
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 211 DYNIQKESTLHLVL 224
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 78 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 134
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 135 DYNIQKESTLHLVL 148
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 58
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 59 DYNIQKESTLHLVL 72
Score = 121 (47.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 2 KLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAD 61
++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+D
Sbjct: 232 QIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLSD 288
Query: 62 NKVSEDGFLVVML 74
+ ++ L ++L
Sbjct: 289 YNIQKESTLHLVL 301
>TAIR|locus:2138386 [details] [associations]
symbol:UBQ11 "AT4G05050" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161502 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
UniGene:At.48785 InterPro:IPR019954 EMBL:AF162444
InterPro:IPR019956 PRINTS:PR00348 KO:K08770 RefSeq:NP_567247.2
UniGene:At.24970 UniGene:At.25274 UniGene:At.47590 UniGene:At.74401
GeneID:828148 KEGG:ath:AT4G02890 EMBL:AY052661 EMBL:AY054281
EMBL:AY057530 EMBL:AY098958 IPI:IPI00528294 RefSeq:NP_001031585.1
RefSeq:NP_001118936.1 RefSeq:NP_567286.1 RefSeq:NP_849291.1
UniGene:At.74780 ProteinModelPortal:P0CH33 SMR:P0CH33 PRIDE:P0CH33
EnsemblPlants:AT4G02890.1 EnsemblPlants:AT4G02890.2
EnsemblPlants:AT4G05050.1 EnsemblPlants:AT4G05050.2
EnsemblPlants:AT4G05050.3 GeneID:825847 KEGG:ath:AT4G05050
TAIR:At4g05050 Uniprot:P0CH33
Length = 229
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 120 (47.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>GENEDB_PFALCIPARUM|PFL0585w [details] [associations]
symbol:PFL0585w "PfpUB Plasmodium falciparum
polyubiquitin" species:5833 "Plasmodium falciparum" [GO:0000151
"ubiquitin ligase complex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 EMBL:AE014188
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000151
HSSP:Q862M4 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 GenomeReviews:AE014188_GR KO:K08770
OMA:CSDNIEN RefSeq:XP_001350526.1 ProteinModelPortal:Q7KQK2
SMR:Q7KQK2 IntAct:Q7KQK2 MINT:MINT-1550540
EnsemblProtists:PFL0585w:mRNA GeneID:811170 KEGG:pfa:PFL0585w
EuPathDB:PlasmoDB:PF3D7_1211800 ProtClustDB:CLSZ2430459
Uniprot:Q7KQK2
Length = 381
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|Q7KQK2 [details] [associations]
symbol:pUB "Polyubiquitin" species:36329 "Plasmodium
falciparum 3D7" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 EMBL:AE014188 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0000151 HSSP:Q862M4 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942
GenomeReviews:AE014188_GR KO:K08770 OMA:CSDNIEN
RefSeq:XP_001350526.1 ProteinModelPortal:Q7KQK2 SMR:Q7KQK2
IntAct:Q7KQK2 MINT:MINT-1550540 EnsemblProtists:PFL0585w:mRNA
GeneID:811170 KEGG:pfa:PFL0585w EuPathDB:PlasmoDB:PF3D7_1211800
ProtClustDB:CLSZ2430459 Uniprot:Q7KQK2
Length = 381
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>ZFIN|ZDB-GENE-061110-88 [details] [associations]
symbol:ubc "ubiquitin C" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 ZFIN:ZDB-GENE-061110-88
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
CTD:7316 KO:K08770 OMA:HLTMQIF EMBL:CU463283 IPI:IPI00633976
RefSeq:NP_001071272.2 UniGene:Dr.75568 Ensembl:ENSDART00000099105
GeneID:777766 KEGG:dre:777766 NextBio:20924320 ArrayExpress:F1QHN6
Bgee:F1QHN6 Uniprot:F1QHN6
Length = 533
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P0CG68 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
[GO:0072520 "seminiferous tubule development" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0021888
"hypothalamus gonadotrophin-releasing hormone neuron development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0002020 "protease binding" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GeneTree:ENSGT00550000074658 InterPro:IPR019956
PRINTS:PR00348 CTD:7316 KO:K08770 EMBL:CU633504 EMBL:M18159
RefSeq:XP_003483459.1 RefSeq:XP_003483460.1 RefSeq:XP_003483461.1
RefSeq:XP_003483462.1 UniGene:Ssc.55511 Ensembl:ENSSSCT00000031057
GeneID:396966 KEGG:ssc:396966 OMA:HLTMQIF Uniprot:P0CG68
Length = 533
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I++ K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQE---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>FB|FBgn0086558 [details] [associations]
symbol:Ubi-p5E "Ubiquitin-5E" species:7227 "Drosophila
melanogaster" [GO:0005704 "polytene chromosome band" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0006464 "cellular protein modification process"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005875 EMBL:AE014298 GO:GO:0006464 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
GO:GO:0005704 GeneTree:ENSGT00550000074658 InterPro:IPR019956
PRINTS:PR00348 KO:K08770 OMA:HLTMQIF FlyBase:FBgn0086558
EMBL:BT044587 RefSeq:NP_727078.1 UniGene:Dm.21220 SMR:Q9W418
IntAct:Q9W418 MINT:MINT-803543 STRING:Q9W418
EnsemblMetazoa:FBtr0070933 GeneID:326237 KEGG:dme:Dmel_CG32744
UCSC:CG32744-RA CTD:326237 InParanoid:Q9W418 GenomeRNAi:326237
NextBio:847778 Uniprot:Q9W418
Length = 534
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|J9P601 [details] [associations]
symbol:J9P601 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 OMA:FYKIDGS
GeneTree:ENSGT00550000074763 EMBL:AAEX03026776
Ensembl:ENSCAFT00000028891 Uniprot:J9P601
Length = 156
Score = 110 (43.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ K I D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENEKAKILD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSED 67
D + ++
Sbjct: 58 DYNIQKE 64
>UNIPROTKB|E1C0H4 [details] [associations]
symbol:ANUBL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR000626 Pfam:PF00240 Pfam:PF01428
PROSITE:PS51039 SMART:SM00154 SMART:SM00213 GO:GO:0046872
GO:GO:0008270 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019956
PRINTS:PR00348 Gene3D:4.10.1110.10 OMA:HNSLVKP
GeneTree:ENSGT00510000046525 EMBL:AADN02027779 IPI:IPI00604293
Ensembl:ENSGALT00000009482 Uniprot:E1C0H4
Length = 715
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M+L ++TL G+ FE+RV P +TV++VK I+ ++G P QQ LI N LKD+ L
Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIQRLEG---IPISQQHLIWNNVELKDDYCLN 84
Query: 61 DNKVSEDGFLVVMLS 75
D +SE L ++L+
Sbjct: 85 DYNISEGCTLKLVLA 99
>UNIPROTKB|F1P0H6 [details] [associations]
symbol:RPS27A "Ubiquitin-40S ribosomal protein S27a"
species:9031 "Gallus gallus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 GeneTree:ENSGT00550000074763
EMBL:AADN02046834 EMBL:AADN02046833 IPI:IPI00821487
Ensembl:ENSGALT00000040430 ArrayExpress:F1P0H6 Uniprot:F1P0H6
Length = 157
Score = 110 (43.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 59
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTL 56
>ZFIN|ZDB-GENE-050411-10 [details] [associations]
symbol:ubb "ubiquitin B" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 ZFIN:ZDB-GENE-050411-10
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 CTD:7314 KO:K08770 EMBL:BC069831 EMBL:BC093444
IPI:IPI00635190 RefSeq:NP_001013290.2 UniGene:Dr.104259
STRING:Q6IS68 GeneID:550134 KEGG:dre:550134 InParanoid:Q6IS68
NextBio:20879425 Uniprot:Q6IS68
Length = 624
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 547 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 603
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 604 DYNIQKESTLHLVL 617
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 471 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 527
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 528 DYNIQKESTLHLVL 541
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 395 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 451
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 452 DYNIQKESTLHLVL 465
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 319 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 375
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 376 DYNIQKESTLHLVL 389
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 243 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 299
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 300 DYNIQKESTLHLVL 313
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 167 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 223
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 224 DYNIQKESTLHLVL 237
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 91 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 147
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 148 DYNIQKESTLHLVL 161
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 15 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 71
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 72 DYNIQKESTLHLVL 85
>UNIPROTKB|P0CG48 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9606 "Homo sapiens"
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144 "female
meiosis I" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0010992 "ubiquitin homeostasis" evidence=IEA]
[GO:0021888 "hypothalamus gonadotrophin-releasing hormone neuron
development" evidence=IEA] [GO:0060613 "fat pad development"
evidence=IEA] [GO:0072520 "seminiferous tubule development"
evidence=IEA] [GO:0097009 "energy homeostasis" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002020 "protease
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006281 "DNA
repair" evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=TAS] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0007220 "Notch receptor
processing" evidence=TAS] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0032480 "negative regulation of type I interferon
production" evidence=TAS] [GO:0033554 "cellular response to stress"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=TAS] [GO:0042590
"antigen processing and presentation of exogenous peptide antigen
via MHC class I" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050852 "T cell receptor signaling pathway"
evidence=TAS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0051436 "negative
regulation of ubiquitin-protein ligase activity involved in mitotic
cell cycle" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0071456 "cellular response to hypoxia" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000080 "G1
phase of mitotic cell cycle" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=TAS] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
Reactome:REACT_6782 Reactome:REACT_13505 Reactome:REACT_81380
Reactome:REACT_216 Reactome:REACT_578 Reactome:REACT_2001
Reactome:REACT_97910 Reactome:REACT_71 Reactome:REACT_11123
Reactome:REACT_21257 Reactome:REACT_6850 InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Reactome:REACT_120956 Prosite:PS00299
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0007173 GO:GO:0008543 GO:GO:0016071 GO:GO:0048011
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0050852
GO:GO:0007254 GO:GO:0000082 GO:GO:0043123 GO:GO:0006281
GO:GO:0045944 GO:GO:0007219 GO:GO:0045087 GO:GO:0000187
GO:GO:0019221 Reactome:REACT_115202 GO:GO:0016197 GO:GO:0010008
GO:GO:0000122 GO:GO:0051436 GO:GO:0007179 GO:GO:0007220
Reactome:REACT_107772 GO:GO:0051092 PDB:2Z59 PDBsum:2Z59
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000216 PDB:2LVO PDB:2LVP
PDB:2LVQ PDBsum:2LVO PDBsum:2LVP PDBsum:2LVQ GO:GO:0000209
GO:GO:0000084 Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437
GO:GO:0006367 GO:GO:0016044 GO:GO:0042059 GO:GO:0061418
GO:GO:0030512 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0000080 GO:GO:0032480 PDB:3O65 PDBsum:3O65 PDB:2JRI
PDBsum:2JRI GO:GO:0007249 InterPro:IPR019954 Reactome:REACT_24941
PDB:4AUQ PDBsum:4AUQ GO:GO:0030666 GO:GO:0070423 Reactome:REACT_383
GO:GO:0046788 PDB:3B08 PDB:3B0A PDBsum:3B08 PDBsum:3B0A PDB:3OFI
PDBsum:3OFI PDB:3DVG PDB:3DVN PDBsum:3DVG PDBsum:3DVN
InterPro:IPR019956 PRINTS:PR00348 PDB:2GMI PDBsum:2GMI PDB:3JVZ
PDB:3JW0 PDBsum:3JVZ PDBsum:3JW0 PDB:2ZVN PDB:2ZVO PDB:3JSV
PDBsum:2ZVN PDBsum:2ZVO PDBsum:3JSV PDB:1Q5W PDBsum:1Q5W PDB:3BY4
PDB:3C0R PDBsum:3BY4 PDBsum:3C0R PDB:4DDG PDB:4DDI PDB:4DHZ
PDB:4I6L PDBsum:4DDG PDBsum:4DDI PDBsum:4DHZ PDBsum:4I6L PDB:4DHJ
PDBsum:4DHJ PDB:3TMP PDBsum:3TMP PDB:2K8B PDB:2K8C PDBsum:2K8B
PDBsum:2K8C PDB:2KHW PDBsum:2KHW PDB:1YX5 PDB:1YX6 PDB:2KDF
PDBsum:1YX5 PDBsum:1YX6 PDBsum:2KDF PDB:1ZO6 PDBsum:1ZO6
HPA:HPA041344 PDB:3K9P PDB:3N30 PDB:3N32 PDB:3NS8 PDBsum:3K9P
PDBsum:3N30 PDBsum:3N32 PDBsum:3NS8 PDB:3MHS PDBsum:3MHS PDB:2K6D
PDBsum:2K6D PDB:3LDZ PDBsum:3LDZ PDB:3OJ3 PDB:3OJ4 PDBsum:3OJ3
PDBsum:3OJ4 PDB:1S1Q PDBsum:1S1Q PDB:3PTF PDBsum:3PTF PDB:3A33
PDBsum:3A33 PDB:2FUH PDB:3UGB PDBsum:2FUH PDBsum:3UGB PDB:2KJH
PDBsum:2KJH PDB:1ZGU PDBsum:1ZGU HPA:HPA049132 PDB:1FXT PDBsum:1FXT
EMBL:M26880 EMBL:AB009010 EMBL:AB089613 EMBL:AC126309 EMBL:BC039193
EMBL:D63791 EMBL:AB003730 EMBL:M17597 IPI:IPI00969566 PIR:A02574
PIR:A22005 PIR:A29526 UniGene:Hs.520348 PDB:1C3T PDB:1CMX PDB:1D3Z
PDB:1F9J PDB:1G6J PDB:1GJZ PDB:1NBF PDB:1OGW PDB:1SIF PDB:1TBE
PDB:1UBI PDB:1UBQ PDB:1UD7 PDB:1XD3 PDB:1XQQ PDB:2AYO PDB:2BGF
PDB:2DEN PDB:2G45 PDB:2GBJ PDB:2GBK PDB:2GBM PDB:2GBN PDB:2GBR
PDB:2HTH PDB:2IBI PDB:2J7Q PDB:2JF5 PDB:2JY6 PDB:2JZZ PDB:2K25
PDB:2KLG PDB:2KN5 PDB:2KX0 PDB:2L3Z PDB:2LD9 PDB:2NR2 PDB:2O6V
PDB:2OJR PDB:2PE9 PDB:2PEA PDB:2RR9 PDB:2W9N PDB:2WDT PDB:2XEW
PDB:2Y5B PDB:2ZCB PDB:3ALB PDB:3AUL PDB:3EEC PDB:3EFU PDB:3EHV
PDB:3H7P PDB:3H7S PDB:3HM3 PDB:3I3T PDB:3IFW PDB:3IHP PDB:3K9O
PDB:3KVF PDB:3KW5 PDB:3MTN PDB:3N3K PDB:3ONS PDB:3PRM PDB:3PT2
PDB:3Q3F PDB:3RUL PDB:3U30 PDB:3V6C PDB:3V6E PDB:3VFK PDB:4HK2
PDBsum:1C3T PDBsum:1CMX PDBsum:1D3Z PDBsum:1F9J PDBsum:1G6J
PDBsum:1GJZ PDBsum:1NBF PDBsum:1OGW PDBsum:1SIF PDBsum:1TBE
PDBsum:1UBI PDBsum:1UBQ PDBsum:1UD7 PDBsum:1XD3 PDBsum:1XQQ
PDBsum:2AYO PDBsum:2BGF PDBsum:2DEN PDBsum:2G45 PDBsum:2GBJ
PDBsum:2GBK PDBsum:2GBM PDBsum:2GBN PDBsum:2GBR PDBsum:2HTH
PDBsum:2IBI PDBsum:2J7Q PDBsum:2JF5 PDBsum:2JY6 PDBsum:2JZZ
PDBsum:2K25 PDBsum:2KLG PDBsum:2KN5 PDBsum:2KX0 PDBsum:2L3Z
PDBsum:2LD9 PDBsum:2NR2 PDBsum:2O6V PDBsum:2OJR PDBsum:2PE9
PDBsum:2PEA PDBsum:2RR9 PDBsum:2W9N PDBsum:2WDT PDBsum:2XEW
PDBsum:2Y5B PDBsum:2ZCB PDBsum:3ALB PDBsum:3AUL PDBsum:3EEC
PDBsum:3EFU PDBsum:3EHV PDBsum:3H7P PDBsum:3H7S PDBsum:3HM3
PDBsum:3I3T PDBsum:3IFW PDBsum:3IHP PDBsum:3K9O PDBsum:3KVF
PDBsum:3KW5 PDBsum:3MTN PDBsum:3N3K PDBsum:3ONS PDBsum:3PRM
PDBsum:3PT2 PDBsum:3Q3F PDBsum:3RUL PDBsum:3U30 PDBsum:3V6C
PDBsum:3V6E PDBsum:3VFK PDBsum:4HK2 ProteinModelPortal:P0CG48
SMR:P0CG48 IntAct:P0CG48 PhosphoSite:P0CG48 DMDM:308153512
PRIDE:P0CG48 Ensembl:ENST00000339647 Ensembl:ENST00000536769
UCSC:uc001ugs.4 GeneCards:GC12M125396 HGNC:HGNC:12468 HPA:CAB000362
HPA:CAB005419 MIM:191340 neXtProt:NX_P0CG48 ChiTaRS:UBC
EvolutionaryTrace:P0CG48 GenomeRNAi:7316 NextBio:28598
ArrayExpress:P0CG48 Bgee:P0CG48 GermOnline:ENSG00000150991
Uniprot:P0CG48
Length = 685
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|P0CH28 [details] [associations]
symbol:UBC "Polyubiquitin-C" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 PDB:2OOB PDBsum:2OOB PDB:1WR6
PDB:1YD8 PDBsum:1WR6 PDBsum:1YD8 PDB:2D3G PDBsum:2D3G
InterPro:IPR019956 PRINTS:PR00348 PDB:2XBB PDBsum:2XBB PDB:2FID
PDB:2FIF PDBsum:2FID PDBsum:2FIF PDB:2C7M PDB:2C7N PDBsum:2C7M
PDBsum:2C7N PDB:1UZX PDBsum:1UZX PDB:2WWZ PDB:2WX0 PDB:2WX1
PDBsum:2WWZ PDBsum:2WX0 PDBsum:2WX1 PDB:1WRD PDBsum:1WRD
EMBL:AAFC03038308 EMBL:M62428 IPI:IPI00726431 PIR:A90388
RefSeq:NP_001193236.1 UniGene:Bt.5070 PDB:1AAR PDB:1E0Q PDB:1P3Q
PDB:1V80 PDB:1V81 PDB:2DX5 PDB:2HD5 PDB:2QHO PDB:2ZCC PDB:3H1U
PDB:3M3J PDBsum:1AAR PDBsum:1E0Q PDBsum:1P3Q PDBsum:1V80
PDBsum:1V81 PDBsum:2DX5 PDBsum:2HD5 PDBsum:2QHO PDBsum:2ZCC
PDBsum:3H1U PDBsum:3M3J ProteinModelPortal:P0CH28 PRIDE:P0CH28
GeneID:444874 KEGG:bta:444874 CTD:7316 KO:K08770
EvolutionaryTrace:P0CH28 NextBio:20831762 Uniprot:P0CH28
Length = 690
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I++ K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQE---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>CGD|CAL0004945 [details] [associations]
symbol:UBI4 species:5476 "Candida albicans" [GO:0016567
"protein ubiquitination" evidence=IGI;ISS;IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0031386 "protein tag" evidence=IGI;ISS] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0033554 "cellular response
to stress" evidence=IEP;IMP] [GO:0034605 "cellular response to
heat" evidence=IMP] [GO:0044182 "filamentous growth of a population
of unicellular organisms" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 CGD:CAL0004945 Prosite:PS00299 GO:GO:0005886
GO:GO:0034605 GO:GO:0009405 GO:GO:0016567 GO:GO:0000902
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0044182 GO:GO:0036166 EMBL:AACQ01000029
EMBL:AACQ01000028 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 RefSeq:XP_719750.1
RefSeq:XP_719867.1 ProteinModelPortal:Q5ADS0 SMR:Q5ADS0
STRING:Q5ADS0 GeneID:3638432 GeneID:3638649 KEGG:cal:CaO19.14063
KEGG:cal:CaO19.6771 Uniprot:Q5ADS0
Length = 229
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|Q5ADS0 [details] [associations]
symbol:UBI4 "Putative uncharacterized protein UBI4"
species:237561 "Candida albicans SC5314" [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IGI;ISS;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0031386 "protein tag"
evidence=IGI;ISS] [GO:0033554 "cellular response to stress"
evidence=IEP;IMP] [GO:0034605 "cellular response to heat"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 CGD:CAL0004945 Prosite:PS00299 GO:GO:0005886
GO:GO:0034605 GO:GO:0009405 GO:GO:0016567 GO:GO:0000902
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386 InterPro:IPR019954
eggNOG:COG5272 GO:GO:0044182 GO:GO:0036166 EMBL:AACQ01000029
EMBL:AACQ01000028 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K08770 RefSeq:XP_719750.1
RefSeq:XP_719867.1 ProteinModelPortal:Q5ADS0 SMR:Q5ADS0
STRING:Q5ADS0 GeneID:3638432 GeneID:3638649 KEGG:cal:CaO19.14063
KEGG:cal:CaO19.6771 Uniprot:Q5ADS0
Length = 229
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>MGI|MGI:98889 [details] [associations]
symbol:Ubc "ubiquitin C" species:10090 "Mus musculus"
[GO:0002020 "protease binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0010992
"ubiquitin homeostasis" evidence=IGI] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 MGI:MGI:98889 Prosite:PS00299
GO:GO:0005829 GO:GO:0005654 Reactome:REACT_115202
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
Reactome:REACT_109335 Reactome:REACT_24972 PDB:3VHT PDBsum:3VHT
GO:GO:0010992 GeneTree:ENSGT00550000074658 InterPro:IPR019956
PRINTS:PR00348 REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 Genevestigator:P62991 PDB:2ZNV
PDBsum:2ZNV PDB:3A9J PDBsum:3A9J PDB:3A9K PDBsum:3A9K CTD:7316
KO:K08770 EMBL:AF285161 EMBL:AF285162 EMBL:AC138613 EMBL:D50527
IPI:IPI00969323 PIR:A49007 PIR:S11296 RefSeq:NP_062613.3
UniGene:Mm.331 UniGene:Mm.419997 PDB:3A1Q PDBsum:3A1Q
ProteinModelPortal:P0CG50 SMR:P0CG50 IntAct:P0CG50
PhosphoSite:P0CG50 PRIDE:P0CG50 Ensembl:ENSMUST00000136312
Ensembl:ENSMUST00000156249 GeneID:22190 KEGG:mmu:22190
UCSC:uc008zro.2 OMA:TTINIKY EvolutionaryTrace:P0CG50 NextBio:302161
Bgee:P0CG50 Uniprot:P0CG50
Length = 734
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>RGD|620240 [details] [associations]
symbol:Rps27a "ribosomal protein S27a" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0015935 "small ribosomal subunit" evidence=ISO]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO;IDA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 MGI:MGI:98889
Prosite:PS00299 GO:GO:0005829 GO:GO:0005654 Reactome:REACT_115202
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
Reactome:REACT_109335 Reactome:REACT_24972 PDB:3VHT PDBsum:3VHT
GO:GO:0010992 GeneTree:ENSGT00550000074658 InterPro:IPR019956
PRINTS:PR00348 REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 Genevestigator:P62991 PDB:2ZNV
PDBsum:2ZNV PDB:3A9J PDBsum:3A9J PDB:3A9K PDBsum:3A9K CTD:7316
KO:K08770 EMBL:AF285161 EMBL:AF285162 EMBL:AC138613 EMBL:D50527
IPI:IPI00969323 PIR:A49007 PIR:S11296 RefSeq:NP_062613.3
UniGene:Mm.331 UniGene:Mm.419997 PDB:3A1Q PDBsum:3A1Q
ProteinModelPortal:P0CG50 SMR:P0CG50 IntAct:P0CG50
PhosphoSite:P0CG50 PRIDE:P0CG50 Ensembl:ENSMUST00000136312
Ensembl:ENSMUST00000156249 GeneID:22190 KEGG:mmu:22190
UCSC:uc008zro.2 OMA:TTINIKY EvolutionaryTrace:P0CG50 NextBio:302161
Bgee:P0CG50 Uniprot:P0CG50
Length = 734
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>RGD|621562 [details] [associations]
symbol:Ubb "ubiquitin B" species:10116 "Rattus norvegicus"
[GO:0007141 "male meiosis I" evidence=ISO] [GO:0007144 "female
meiosis I" evidence=ISO] [GO:0008584 "male gonad development"
evidence=ISO] [GO:0008585 "female gonad development" evidence=ISO]
[GO:0010992 "ubiquitin homeostasis" evidence=ISO] [GO:0021888
"hypothalamus gonadotrophin-releasing hormone neuron development"
evidence=ISO] [GO:0060612 "adipose tissue development"
evidence=ISO] [GO:0060613 "fat pad development" evidence=ISO]
[GO:0072520 "seminiferous tubule development" evidence=ISO]
[GO:0097009 "energy homeostasis" evidence=ISO] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 MGI:MGI:98889 Prosite:PS00299
GO:GO:0005829 GO:GO:0005654 Reactome:REACT_115202
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
Reactome:REACT_109335 Reactome:REACT_24972 PDB:3VHT PDBsum:3VHT
GO:GO:0010992 GeneTree:ENSGT00550000074658 InterPro:IPR019956
PRINTS:PR00348 REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 Genevestigator:P62991 PDB:2ZNV
PDBsum:2ZNV PDB:3A9J PDBsum:3A9J PDB:3A9K PDBsum:3A9K CTD:7316
KO:K08770 EMBL:AF285161 EMBL:AF285162 EMBL:AC138613 EMBL:D50527
IPI:IPI00969323 PIR:A49007 PIR:S11296 RefSeq:NP_062613.3
UniGene:Mm.331 UniGene:Mm.419997 PDB:3A1Q PDBsum:3A1Q
ProteinModelPortal:P0CG50 SMR:P0CG50 IntAct:P0CG50
PhosphoSite:P0CG50 PRIDE:P0CG50 Ensembl:ENSMUST00000136312
Ensembl:ENSMUST00000156249 GeneID:22190 KEGG:mmu:22190
UCSC:uc008zro.2 OMA:TTINIKY EvolutionaryTrace:P0CG50 NextBio:302161
Bgee:P0CG50 Uniprot:P0CG50
Length = 734
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>RGD|68344 [details] [associations]
symbol:Uba52 "ubiquitin A-52 residue ribosomal protein fusion
product 1" species:10116 "Rattus norvegicus" [GO:0005622
"intracellular" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
MGI:MGI:98889 Prosite:PS00299 GO:GO:0005829 GO:GO:0005654
Reactome:REACT_115202 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 Reactome:REACT_109335 Reactome:REACT_24972
PDB:3VHT PDBsum:3VHT GO:GO:0010992 GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 REPRODUCTION-2DPAGE:P62991
GermOnline:ENSMUSG00000008348 GermOnline:ENSMUSG00000019505
GermOnline:ENSMUSG00000020460 GermOnline:ENSMUSG00000044285
GermOnline:ENSMUSG00000058838 GermOnline:ENSMUSG00000061390
GermOnline:ENSMUSG00000063789 Genevestigator:P62991 PDB:2ZNV
PDBsum:2ZNV PDB:3A9J PDBsum:3A9J PDB:3A9K PDBsum:3A9K CTD:7316
KO:K08770 EMBL:AF285161 EMBL:AF285162 EMBL:AC138613 EMBL:D50527
IPI:IPI00969323 PIR:A49007 PIR:S11296 RefSeq:NP_062613.3
UniGene:Mm.331 UniGene:Mm.419997 PDB:3A1Q PDBsum:3A1Q
ProteinModelPortal:P0CG50 SMR:P0CG50 IntAct:P0CG50
PhosphoSite:P0CG50 PRIDE:P0CG50 Ensembl:ENSMUST00000136312
Ensembl:ENSMUST00000156249 GeneID:22190 KEGG:mmu:22190
UCSC:uc008zro.2 OMA:TTINIKY EvolutionaryTrace:P0CG50 NextBio:302161
Bgee:P0CG50 Uniprot:P0CG50
Length = 734
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>FB|FBgn0003943 [details] [associations]
symbol:Ubi-p63E "Ubiquitin-63E" species:7227 "Drosophila
melanogaster" [GO:0009987 "cellular process" evidence=IMP]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] Reactome:REACT_97910
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005829 GO:GO:0005634 GO:GO:0005875 GO:GO:0006911
EMBL:AE014296 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
KO:K08770 EMBL:M33013 EMBL:M33015 EMBL:M33122 EMBL:M22428
PIR:A26087 RefSeq:NP_523909.2 RefSeq:NP_728908.1 RefSeq:NP_995994.1
UniGene:Dm.2641 ProteinModelPortal:P0CG69 SMR:P0CG69
EnsemblMetazoa:FBtr0073177 EnsemblMetazoa:FBtr0073178
EnsemblMetazoa:FBtr0073179 EnsemblMetazoa:FBtr0333142 GeneID:38456
KEGG:dme:Dmel_CG11624 CTD:38456 FlyBase:FBgn0003943 OMA:KARFLVN
OrthoDB:EOG44TMPP PhylomeDB:P0CG69 GenomeRNAi:38456 NextBio:808756
Bgee:P0CG69 GermOnline:CG11624 GermOnline:CG32744 Uniprot:P0CG69
Length = 763
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 741
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 742 DYNIQKESTLHLVL 755
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>CGD|CAL0004315 [details] [associations]
symbol:orf19.5345 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0007103 "spindle pole body duplication associated
with nuclear envelope" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
CGD:CAL0004315 Prosite:PS00299 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 EMBL:AACQ01000059 EMBL:AACQ01000058
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
InterPro:IPR019954 eggNOG:COG5272 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
InterPro:IPR019956 PRINTS:PR00348 RefSeq:XP_717069.1
RefSeq:XP_717148.1 ProteinModelPortal:Q5A5Q4 SMR:Q5A5Q4
STRING:Q5A5Q4 GeneID:3641251 GeneID:3641303 KEGG:cal:CaO19.12805
KEGG:cal:CaO19.5345 Uniprot:Q5A5Q4
Length = 339
Score = 110 (43.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+T+K+ +E+ PS TV +K+ + + K + P G Q LI++GKVLKD T+
Sbjct: 7 ITIKSSGDKKYEVTFDPSITVSQLKELVAE---KSDIPAGSQRLIYSGKVLKDTETVTSY 63
Query: 63 KVSEDGFLVVMLSKSKTLGSAG 84
KV ++G + ++ + S G
Sbjct: 64 KV-QNGHTIHLVKSAAAATSTG 84
Score = 49 (22.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 154 EQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSG 194
E ++Q+ DMG +D+ AL+ + + A++YL G
Sbjct: 300 ENQLRQLNDMGFYDFDRNV--EALRRTGGSVQGAIEYLLGG 338
>RGD|621244 [details] [associations]
symbol:Ubc "ubiquitin C" species:10116 "Rattus norvegicus"
[GO:0002020 "protease binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0010992 "ubiquitin homeostasis" evidence=ISO]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 RGD:621244
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4 InterPro:IPR019954
eggNOG:COG5272 HOVERGEN:HBG000057 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 OrthoDB:EOG4WDDB6 UniGene:Rn.3761 CTD:7316
KO:K08770 EMBL:D17296 EMBL:BC103477 IPI:IPI00361888 PIR:S45359
RefSeq:NP_059010.1 ProteinModelPortal:Q63429 STRING:Q63429
PhosphoSite:Q63429 PRIDE:Q63429 Ensembl:ENSRNOT00000049027
GeneID:50522 KEGG:rno:50522 UCSC:RGD:621244 InParanoid:Q3ZBA1
NextBio:610320 ArrayExpress:Q63429 Genevestigator:Q63429
Uniprot:Q63429
Length = 810
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 741
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 742 DYNIQKESTLHLVL 755
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2140200 [details] [associations]
symbol:UBQ14 "AT4G02890" species:3702 "Arabidopsis
thaliana" [GO:0006464 "cellular protein modification process"
evidence=ISS] [GO:0005773 "vacuole" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0005773 EMBL:CP002687 EMBL:AL161495
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 UniGene:At.48785
InterPro:IPR019954 EMBL:AC004044 InterPro:IPR019956 PRINTS:PR00348
UniGene:At.23108 KO:K08770 IPI:IPI00895605 RefSeq:NP_001118922.1
RefSeq:NP_567247.2 RefSeq:NP_849292.1 RefSeq:NP_974516.4
UniGene:At.24970 UniGene:At.25274 UniGene:At.47590 UniGene:At.74401
GeneID:825880 GeneID:828148 KEGG:ath:AT4G02890 KEGG:ath:AT4G05320
IPI:IPI00528294 RefSeq:NP_001031585.1 RefSeq:NP_001118936.1
RefSeq:NP_567286.1 RefSeq:NP_849291.1 UniGene:At.74780
GeneID:825847 KEGG:ath:AT4G05050 EMBL:L05394 EMBL:AK316842
EMBL:AY087759 ProteinModelPortal:Q3E7T8 SMR:Q3E7T8 PRIDE:Q3E7T8
EnsemblPlants:AT4G02890.3 EnsemblPlants:AT4G02890.4
EnsemblPlants:AT4G05320.5 TAIR:At4g02890 ProtClustDB:CLSN2690710
Uniprot:Q3E7T8
Length = 305
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2143548 [details] [associations]
symbol:UBQ3 "AT5G03240" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0010224
"response to UV-B" evidence=IEP] [GO:0005773 "vacuole"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:AB005240 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0010224 InterPro:IPR019954
EMBL:AL163002 InterPro:IPR019956 PRINTS:PR00348 UniGene:At.46169
KO:K08770 UniGene:At.49314 ProtClustDB:CLSN2690710 EMBL:L05363
EMBL:BT002420 EMBL:BT025868 EMBL:AK317101 IPI:IPI00538011
RefSeq:NP_001031824.1 RefSeq:NP_568112.2 RefSeq:NP_851029.1
UniGene:At.68083 UniGene:At.75559 UniGene:At.75636
ProteinModelPortal:Q1EC66 SMR:Q1EC66 STRING:Q1EC66 PRIDE:Q1EC66
EnsemblPlants:AT5G03240.1 EnsemblPlants:AT5G03240.2
EnsemblPlants:AT5G03240.3 GeneID:831899 KEGG:ath:AT5G03240
TAIR:At5g03240 Genevestigator:Q1EC66 Uniprot:Q1EC66
Length = 306
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2059682 [details] [associations]
symbol:DSK2 "AT2G17200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
GO:GO:0005829 EMBL:CP002685 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 EMBL:AC007127 HSSP:Q9UHD9 OMA:MARNPSM EMBL:AY142486
IPI:IPI00538993 PIR:C84549 RefSeq:NP_179311.1 UniGene:At.22593
ProteinModelPortal:Q9SII8 SMR:Q9SII8 IntAct:Q9SII8 STRING:Q9SII8
PRIDE:Q9SII8 EnsemblPlants:AT2G17200.1 GeneID:816225
KEGG:ath:AT2G17200 TAIR:At2g17200 InParanoid:Q9SII8
PhylomeDB:Q9SII8 ProtClustDB:CLSN2693479 Genevestigator:Q9SII8
Uniprot:Q9SII8
Length = 551
Score = 82 (33.9 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+ ++ G+ F ++ TV + K+ + Q D P QQ LI+ G++LKD+ TL
Sbjct: 20 VNIRCSNGTKFSVKTSLDSTVESFKELV--AQSSD-VPANQQRLIYKGRILKDDQTLLSY 76
Query: 63 KVSED 67
+ D
Sbjct: 77 GLQAD 81
Score = 73 (30.8 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 286 NVTPAEQEA--IQRLEAMGF-DRALVIEAFLACDRNEELAANYLLENAG 331
NV P E+ A +Q+L+ MGF DRA I A LA + N A LL + G
Sbjct: 502 NVPPEERYATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLGSIG 550
Score = 49 (22.3 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 20/47 (42%), Positives = 22/47 (46%)
Query: 141 GQAASNLV-AG-NDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPE 185
G A S L AG DL QT QQ+ D T A+Q NNPE
Sbjct: 143 GNAMSGLFGAGLPDLVQTQQQLAQNPNMIRDMMN-TPAIQNLMNNPE 188
>TAIR|locus:2206310 [details] [associations]
symbol:UBQ13 "AT1G65350" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
EMBL:CP002684 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 KO:K08770
IPI:IPI00523568 RefSeq:NP_176714.4 UniGene:At.66106
ProteinModelPortal:F4I9X6 SMR:F4I9X6 EnsemblPlants:AT1G65350.1
GeneID:842845 KEGG:ath:AT1G65350 OMA:FLADYNI ArrayExpress:F4I9X6
Uniprot:F4I9X6
Length = 319
Score = 120 (47.3 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 119 (46.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVM 73
DN E +V+
Sbjct: 134 DNIQKESTLHLVL 146
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEWIPPDQQRLIFAGKQLEDGRTLA 208
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 209 DYNIQKESTLHLVL 222
>POMBASE|SPBC12D12.08c [details] [associations]
symbol:ned8 "ubiquitin-like protein modifier Ned8"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0031386 "protein tag"
evidence=IDA] [GO:0045116 "protein neddylation" evidence=IGI]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=NAS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 PomBase:SPBC12D12.08c Prosite:PS00299 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0019005 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386
GO:GO:0051443 InterPro:IPR019954 eggNOG:COG5272 GO:GO:0045116
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 KO:K12158
OMA:EPTDKVD OrthoDB:EOG4CVKHT EMBL:AJ003818 PIR:T39965
RefSeq:NP_595955.1 ProteinModelPortal:O14399 SMR:O14399
IntAct:O14399 STRING:O14399 EnsemblFungi:SPBC12D12.08c.1
GeneID:2540129 KEGG:spo:SPBC12D12.08c NextBio:20801265
Uniprot:O14399
Length = 78
Score = 100 (40.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDE 56
M + VKTL G E+ + P+D V +K+ +E+ K+ P QQ LI+ GK + D+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEE---KEGIPPSQQRLIYAGKQMADD 53
>RGD|1564290 [details] [associations]
symbol:Rps27l3 "ribosomal protein S27-like 3" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
RGD:1564290 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019956
PRINTS:PR00348 GeneTree:ENSGT00550000074763 IPI:IPI00475911
Ensembl:ENSRNOT00000027780 Uniprot:F1LU69
Length = 168
Score = 111 (44.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+PSDT+ VK I+D +G P QQ L GK L+ TL+
Sbjct: 16 MQIFVKTLIGKTIMLEVEPSDTIENVKAQIQDEEGT---PPDQQRLTFAGKQLEGGRTLS 72
Query: 61 DNKVSEDGFLVVML 74
D V ++ L ++L
Sbjct: 73 DYNVQKESTLHLVL 86
>TAIR|locus:2151774 [details] [associations]
symbol:UBQ9 "AT5G37640" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=TAS] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0005730
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 HSSP:Q862M4
InterPro:IPR019954 eggNOG:COG5272 EMBL:AB018107 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K08770 IPI:IPI00533118
PIR:S55244 RefSeq:NP_568552.1 UniGene:At.65595
ProteinModelPortal:Q9FHQ6 SMR:Q9FHQ6 STRING:Q9FHQ6 PaxDb:Q9FHQ6
PRIDE:Q9FHQ6 EnsemblPlants:AT5G37640.1 GeneID:833742
KEGG:ath:AT5G37640 TAIR:At5g37640 InParanoid:Q9FHQ6 OMA:GREMSQD
PhylomeDB:Q9FHQ6 Genevestigator:Q9FHQ6 Uniprot:Q9FHQ6
Length = 322
Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ KTL I V SDT+ VK I+D++G P QQ LI +GK+L D TLA
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEG---IPLDQQRLIFSGKLLDDGRTLA 59
Query: 61 DNKVSEDGFLVVML 74
D + +D L + L
Sbjct: 60 DYSIQKDSILHLAL 73
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L D TLA
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGVPPDQQRLIFAGKQLDDGRTLA 135
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 136 DYNIQKESTLHLVL 149
>UNIPROTKB|F1M9H9 [details] [associations]
symbol:F1M9H9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019956 PRINTS:PR00348 IPI:IPI00564052
Ensembl:ENSRNOT00000041694 Uniprot:F1M9H9
Length = 166
Score = 110 (43.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + ++PSDT+ VK I++ +G P QQ L GK L+D TL+
Sbjct: 16 MQIFVKTLMGKTIMLEIEPSDTIENVKAKIQNEEG---IPPDQQRLDFYGKQLEDGHTLS 72
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 73 DYSIQKESTLHLVL 86
>TAIR|locus:2180434 [details] [associations]
symbol:UBQ4 "AT5G20620" species:3702 "Arabidopsis
thaliana" [GO:0006464 "cellular protein modification process"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 EMBL:AF296832 InterPro:IPR019956
PRINTS:PR00348 KO:K08770 OMA:CSDNIEN EMBL:X12853 EMBL:U33014
IPI:IPI00535543 PIR:S01425 RefSeq:NP_568397.1 UniGene:At.26012
UniGene:At.71604 ProteinModelPortal:P0CH32 SMR:P0CH32 PRIDE:P0CH32
EnsemblPlants:AT5G20620.1 GeneID:832184 KEGG:ath:AT5G20620
TAIR:At5g20620 Uniprot:P0CH32
Length = 382
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 120 (47.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|G4MY63 [details] [associations]
symbol:MGG_01282 "Polyubiquitin" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0016567
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0043581 EMBL:CM001232
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348 KO:K08770
RefSeq:XP_003714201.1 ProteinModelPortal:G4MY63 SMR:G4MY63
EnsemblFungi:MGG_01282T0 GeneID:2679448 KEGG:mgr:MGG_01282
Uniprot:G4MY63
Length = 305
Score = 118 (46.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 118 (46.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 118 (46.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 118 (46.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>ASPGD|ASPL0000049163 [details] [associations]
symbol:ubi4 species:162425 "Emericella nidulans"
[GO:0031386 "protein tag" evidence=ISA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 EMBL:BN001307 GO:GO:0016567 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 InterPro:IPR019956
PRINTS:PR00348 EnsemblFungi:CADANIAT00008667 OMA:TTHQEEN
Uniprot:C8VLC7
Length = 305
Score = 118 (46.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR|locus:2115663 [details] [associations]
symbol:UBQ10 "AT4G05320" species:3702 "Arabidopsis
thaliana" [GO:0006464 "cellular protein modification process"
evidence=ISS;TAS] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0007568 "aging" evidence=IEP] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009751
GO:GO:0006464 EMBL:AL161503 InterPro:IPR019955 PROSITE:PS50053
UniGene:At.48785 InterPro:IPR019954 eggNOG:COG5272 EMBL:AC012392
InterPro:IPR019956 PRINTS:PR00348 UniGene:At.23108 KO:K08770
OMA:IQKESTH EMBL:L05361 EMBL:AY139999 EMBL:BT000701 IPI:IPI00520650
IPI:IPI00895605 RefSeq:NP_001118922.1 RefSeq:NP_567247.2
RefSeq:NP_849292.1 RefSeq:NP_849299.4 RefSeq:NP_849301.4
RefSeq:NP_974516.4 UniGene:At.24970 UniGene:At.25274
UniGene:At.47590 UniGene:At.74401 ProteinModelPortal:Q8H159
SMR:Q8H159 IntAct:Q8H159 PaxDb:Q8H159 PRIDE:Q8H159
EnsemblPlants:AT4G05320.2 EnsemblPlants:AT4G05320.4 GeneID:825880
GeneID:828148 KEGG:ath:AT4G02890 KEGG:ath:AT4G05320 TAIR:At4g05320
PhylomeDB:Q8H159 ProtClustDB:CLSN2692469 Uniprot:Q8H159
Length = 457
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TLA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>UNIPROTKB|F8VSA6 [details] [associations]
symbol:NEDD8 "NEDD8" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014070
"response to organic cyclic compound" evidence=IEA] [GO:0045116
"protein neddylation" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 GO:GO:0005634 GO:GO:0008104 GO:GO:0006357
GO:GO:0014070 InterPro:IPR019955 PROSITE:PS50053 EMBL:AL096870
GO:GO:0045116 InterPro:IPR019956 PRINTS:PR00348 HGNC:HGNC:7732
IPI:IPI00873768 SMR:F8VSA6 Ensembl:ENST00000396828
Ensembl:ENST00000524927 Uniprot:F8VSA6
Length = 50
Score = 97 (39.2 bits), Expect = 0.00015, P = 0.00015
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGK 51
M + VKTL G EI ++P+D V +K+ +E+ K+ P QQ LI++GK
Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGK 48
>SGD|S000003962 [details] [associations]
symbol:UBI4 "Ubiquitin" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IC] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IMP] [GO:0031386
"protein tag" evidence=ISS] [GO:0006950 "response to stress"
evidence=TAS] [GO:0006513 "protein monoubiquitination"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0030437 "ascospore formation" evidence=TAS]
[GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0043008
"ATP-dependent protein binding" evidence=TAS] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 SGD:S000003962 Prosite:PS00299
GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0006281
EMBL:BK006945 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000209
GO:GO:0030437 GO:GO:0031386 GO:GO:0016579 InterPro:IPR019954
GO:GO:0006513 PDB:1OTR PDBsum:1OTR PDB:1WR1 PDBsum:1WR1
GO:GO:0043008 PDB:2G3Q PDBsum:2G3Q GeneTree:ENSGT00550000074658
InterPro:IPR019956 PRINTS:PR00348 PDB:3L0W PDB:3L10 PDBsum:3L0W
PDBsum:3L10 SWISS-2DPAGE:P61864 Genevestigator:P61864
GermOnline:YIL148W GermOnline:YKR094C GermOnline:YLL039C
GermOnline:YLR167W PDB:3OLM PDBsum:3OLM PDB:2JT4 PDBsum:2JT4
PDB:3CMM PDBsum:3CMM KO:K08770 OMA:IQKESTH OrthoDB:EOG4Z0FDT
EMBL:X05731 EMBL:Z73144 EMBL:X01473 EMBL:X01474 PIR:D29456
RefSeq:NP_013061.1 PDB:1Q0W PDB:1ZW7 PDB:2JWZ PDB:2KDI PDB:2L00
PDB:4HCN PDBsum:1Q0W PDBsum:1ZW7 PDBsum:2JWZ PDBsum:2KDI
PDBsum:2L00 PDBsum:4HCN ProteinModelPortal:P0CG63 SMR:P0CG63
EnsemblFungi:YLL039C GeneID:850620 KEGG:sce:YLL039C
EvolutionaryTrace:P0CG63 NextBio:966520 ArrayExpress:P0CG63
Uniprot:P0CG63
Length = 381
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>POMBASE|SPBC337.08c [details] [associations]
symbol:ubi4 "ubiquitin" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007126 "meiosis" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=NAS] [GO:0016579 "protein
deubiquitination" evidence=NAS] [GO:0031386 "protein tag"
evidence=NAS] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
PomBase:SPBC337.08c Prosite:PS00299 GO:GO:0005634 GO:GO:0007126
GO:GO:0005737 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0016567 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031386
GO:GO:0016579 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
KO:K08770 RefSeq:NP_595409.1 ProteinModelPortal:P0CG72
EnsemblFungi:SPBC337.08c.1 GeneID:2541030 KEGG:spo:SPBC337.08c
OMA:IQKESTH OrthoDB:EOG4Z0FDT NextBio:20802144 Uniprot:P0CG72
Length = 382
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>ZFIN|ZDB-GENE-090312-102 [details] [associations]
symbol:zfand4 "zinc finger, AN1-type domain 4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000058 InterPro:IPR000626 Pfam:PF00240
Pfam:PF01428 PROSITE:PS51039 SMART:SM00154 SMART:SM00213
ZFIN:ZDB-GENE-090312-102 GO:GO:0046872 GO:GO:0008270
InterPro:IPR019955 PROSITE:PS50053 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 Gene3D:4.10.1110.10 CTD:93550
HOGENOM:HOG000033974 HOVERGEN:HBG059193 KO:K12163 OMA:HNSLVKP
OrthoDB:EOG4XSKPQ GeneTree:ENSGT00510000046525 EMBL:BX901979
EMBL:CT025882 EMBL:CU012047 IPI:IPI00898343 RefSeq:NP_001189400.1
UniGene:Dr.77571 Ensembl:ENSDART00000146772 GeneID:100148477
KEGG:dre:100148477 NextBio:20792105 Uniprot:B8A682
Length = 673
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M+L ++TL G+ F++RV P + V++VK I+ ++G P QQ LI NG L+DE L
Sbjct: 28 MELFIETLTGTCFQLRVSPFEQVVSVKAKIQRLEG---IPVSQQHLIWNGMELEDEYCLH 84
Query: 61 DNKVSEDGFLVVMLS 75
D ++E L ++L+
Sbjct: 85 DYSITEGCTLKLVLA 99
>RGD|1560997 [details] [associations]
symbol:RGD1560997 "similar to ribosomal protein S27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599
SMART:SM00213 RGD:1560997 Prosite:PS00299 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
GeneTree:ENSGT00550000074763 IPI:IPI00391648
Ensembl:ENSRNOT00000051805 Uniprot:F1M927
Length = 155
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
L V +G + V+PSDT+ VK I+D +G P QQ L+ GK L+D TL+D
Sbjct: 3 LYVSMWEGQTIMLEVEPSDTIENVKAKIQDEEG---IPPDQQRLVFAGKQLEDGRTLSDY 59
Query: 63 KVSEDGFLVVML 74
+ ++ L ++L
Sbjct: 60 NIQKESMLHLVL 71
>SGD|S000002546 [details] [associations]
symbol:RUB1 "Ubiquitin-like protein with similarity to
mammalian NEDD8" species:4932 "Saccharomyces cerevisiae"
[GO:0045116 "protein neddylation" evidence=IGI;IDA] [GO:0031386
"protein tag" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
SGD:S000002546 Prosite:PS00299 GO:GO:0005737 EMBL:BK006938
InterPro:IPR019955 PROSITE:PS50053 EMBL:Z48179 GO:GO:0031386
InterPro:IPR019954 eggNOG:COG5272 GO:GO:0045116 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 KO:K12158
GeneTree:ENSGT00660000095622 OMA:EPTDKVD EMBL:Y16890 PIR:S51867
RefSeq:NP_010423.4 RefSeq:NP_010427.3 ProteinModelPortal:Q03919
SMR:Q03919 DIP:DIP-1627N IntAct:Q03919 MINT:MINT-407484
STRING:Q03919 PaxDb:Q03919 PeptideAtlas:Q03919 EnsemblFungi:YDR139C
GeneID:851717 GeneID:851721 KEGG:sce:YDR139C KEGG:sce:YDR143C
CYGD:YDR139c OrthoDB:EOG4CVKHT NextBio:969415 Genevestigator:Q03919
GermOnline:YDR139C Uniprot:Q03919
Length = 77
Score = 96 (38.9 bits), Expect = 0.00019, P = 0.00019
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + VKTL G + ++ SD V +K+ +E+ K+ P QQ LI GK + D+ T+
Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEE---KEGIPPSQQRLIFQGKQIDDKLTVT 57
Query: 61 DNKVSEDGFLVVMLS 75
D + E L ++L+
Sbjct: 58 DAHLVEGMQLHLVLT 72
>ZFIN|ZDB-GENE-040426-1089 [details] [associations]
symbol:zgc:56596 "zgc:56596" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0071818 "BAT3
complex" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
Prosite:PS00299 ZFIN:ZDB-GENE-040426-1089 GO:GO:0006810
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818 GO:GO:0071816
InterPro:IPR019954 eggNOG:COG5272 InterPro:IPR019956 PRINTS:PR00348
HSSP:Q15843 GeneTree:ENSGT00700000104456 HOVERGEN:HBG072205
HOGENOM:HOG000006827 OrthoDB:EOG42JNST EMBL:CR855300 EMBL:BC049498
IPI:IPI00496295 RefSeq:NP_956594.1 UniGene:Dr.15182
ProteinModelPortal:Q7ZWB2 SMR:Q7ZWB2 STRING:Q7ZWB2 PRIDE:Q7ZWB2
Ensembl:ENSDART00000013870 GeneID:393270 KEGG:dre:393270
InParanoid:Q7ZWB2 OMA:MEKGFSK NextBio:20814328 Bgee:Q7ZWB2
Uniprot:Q7ZWB2
Length = 157
Score = 106 (42.4 bits), Expect = 0.00019, P = 0.00019
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M LTVK L+G ++V ++ V VK+ + + + N P QQ L++ GK L DE L+
Sbjct: 1 MILTVKPLQGKECNVQVTENEKVSTVKELVSE---RLNIPASQQRLLYKGKALADEHRLS 57
Query: 61 DNKVSEDGFL--VVMLSKSKTLGSAG 84
D + + L VV + ++ G+ G
Sbjct: 58 DYSIGPEAKLNLVVRPAGERSSGAVG 83
>TAIR|locus:2059677 [details] [associations]
symbol:DSK2a "AT2G17190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR009060
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 EMBL:CP002685
GenomeReviews:CT485783_GR InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 KO:K04523 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 EMBL:AC007127 HOGENOM:HOG000234878
OMA:WGATAGQ HSSP:Q9UHD9 ProtClustDB:CLSN2693479 EMBL:AF360159
EMBL:AY042828 EMBL:AY081450 EMBL:AY113886 EMBL:AK228616
IPI:IPI00531268 PIR:B84549 RefSeq:NP_565407.1 UniGene:At.21851
ProteinModelPortal:Q9SII9 SMR:Q9SII9 PaxDb:Q9SII9 PRIDE:Q9SII9
ProMEX:Q9SII9 EnsemblPlants:AT2G17190.1 GeneID:816224
KEGG:ath:AT2G17190 TAIR:At2g17190 InParanoid:Q9SII9
PhylomeDB:Q9SII9 ArrayExpress:Q9SII9 Genevestigator:Q9SII9
Uniprot:Q9SII9
Length = 538
Score = 81 (33.6 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 3 LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
+ V+ G+ F + TV + K+ I Q D P QQ LI+ G++LKD+ TL
Sbjct: 20 VNVRCSNGTKFSVTTSLDSTVESFKELI--AQNSD-VPANQQRLIYKGRILKDDQTLLSY 76
Query: 63 KVSED 67
+ D
Sbjct: 77 GLQAD 81
Score = 72 (30.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 286 NVTPAEQEA--IQRLEAMGF-DRALVIEAFLACDRNEELAANYLLENAG 331
NV P E+ A +Q+L+ MGF DRA I A LA + N A LL + G
Sbjct: 489 NVPPEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLGSIG 537
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 141 GQAASNLVAGN--DLEQTIQQIMDMGGGTWDKETV-TRALQAAYNNPE 185
G A + L DLEQ QQ+ +E + T A+Q NNPE
Sbjct: 138 GNAMAGLFGSGLPDLEQAQQQLAQ--NPNMIREMMNTPAIQNLMNNPE 183
>DICTYBASE|DDB_G0286907 [details] [associations]
symbol:ubqD "ubiquitin D" species:44689
"Dictyostelium discoideum" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 dictyBase:DDB_G0286907 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000153_GR InterPro:IPR019955
PROSITE:PS50053 EMBL:AAFI02000092 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 EMBL:M23751 EMBL:M23752
EMBL:M19492 PIR:B27806 PIR:D34080 RefSeq:XP_637465.1
EnsemblProtists:DDB0214929 GeneID:8625864 KEGG:ddi:DDB_G0286907
Uniprot:P0CG77
Length = 229
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 112 (44.5 bits), Expect = 0.00024, P = 0.00024
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>ASPGD|ASPL0000004229 [details] [associations]
symbol:neddH species:162425 "Emericella nidulans"
[GO:0045116 "protein neddylation" evidence=IMP] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0031386 "protein tag" evidence=IEA] InterPro:IPR000626
Pfam:PF00240 SMART:SM00213 Prosite:PS00299 EMBL:BN001301
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
eggNOG:COG5272 EMBL:AACD01000105 InterPro:IPR019956 PRINTS:PR00348
HOGENOM:HOG000233942 KO:K12158 OMA:EPTDKVD OrthoDB:EOG4CVKHT
RefSeq:XP_663783.1 ProteinModelPortal:Q5AZV1 SMR:Q5AZV1
STRING:Q5AZV1 EnsemblFungi:CADANIAT00006830 GeneID:2871073
KEGG:ani:AN6179.2 Uniprot:Q5AZV1
Length = 81
Score = 95 (38.5 bits), Expect = 0.00024, P = 0.00024
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + V+TL G E+ ++P V +K+ +E+ K+ P QQ LI GK + D+ T
Sbjct: 1 MLIKVRTLTGKEIELDIEPDYKVSRIKERVEE---KEGIPPVQQRLIFGGKQMADDKTAQ 57
Query: 61 DNKVSEDGFLVVMLS 75
D + L ++L+
Sbjct: 58 DYNLEGGATLHLVLA 72
>UNIPROTKB|C3KHF2 [details] [associations]
symbol:ubl4a "Ubiquitin-like protein 4A" species:229290
"Anoplopoma fimbria" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT082367 ProteinModelPortal:C3KHF2 Uniprot:C3KHF2
Length = 156
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M LTVK L+G ++V + V VK+ + + + N P QQ L++ GK L DE L+
Sbjct: 1 MILTVKPLQGKECSVQVTEDEKVSTVKELVSE---RLNIPANQQRLLYKGKALSDEHRLS 57
Query: 61 DNKVSEDGFL-VVMLSKSKTLGSAG 84
D + + L +V+ + G++G
Sbjct: 58 DYSIGPEAKLNLVIRPVGERTGASG 82
>GENEDB_PFALCIPARUM|MAL13P1.64 [details] [associations]
symbol:MAL13P1.64 "ubiquitin-like protein
nedd8 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0019941 "modification-dependent protein catabolic process"
evidence=ISS] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0019941 EMBL:AL844509
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 OMA:EPTDKVD
HSSP:Q15843 RefSeq:XP_001349866.1 ProteinModelPortal:Q8IEI4
EnsemblProtists:MAL13P1.64:mRNA GeneID:813953 KEGG:pfa:MAL13P1.64
EuPathDB:PlasmoDB:PF3D7_1313000 ProtClustDB:PTZ00044 Uniprot:Q8IEI4
Length = 76
Score = 94 (38.1 bits), Expect = 0.00031, P = 0.00031
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G +PS +V +K IE+ +G D Q LI++GK + D+ L+
Sbjct: 1 MQILVKTLTGKRQSFNFEPSSSVFQIKMAIEEREGID---AKQIRLIYSGKQMHDDMKLS 57
Query: 61 DNKV 64
D +V
Sbjct: 58 DYRV 61
>UNIPROTKB|Q8IEI4 [details] [associations]
symbol:MAL13P1.64 "Ubiquitin-like protein nedd8 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0019941 EMBL:AL844509 InterPro:IPR019956
PRINTS:PR00348 HOGENOM:HOG000233942 OMA:EPTDKVD HSSP:Q15843
RefSeq:XP_001349866.1 ProteinModelPortal:Q8IEI4
EnsemblProtists:MAL13P1.64:mRNA GeneID:813953 KEGG:pfa:MAL13P1.64
EuPathDB:PlasmoDB:PF3D7_1313000 ProtClustDB:PTZ00044 Uniprot:Q8IEI4
Length = 76
Score = 94 (38.1 bits), Expect = 0.00031, P = 0.00031
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G +PS +V +K IE+ +G D Q LI++GK + D+ L+
Sbjct: 1 MQILVKTLTGKRQSFNFEPSSSVFQIKMAIEEREGID---AKQIRLIYSGKQMHDDMKLS 57
Query: 61 DNKV 64
D +V
Sbjct: 58 DYRV 61
>RGD|2321712 [details] [associations]
symbol:LOC100360645 "ubiquitin B-like" species:10116 "Rattus
norvegicus" [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0010992 "ubiquitin homeostasis"
evidence=IEA] [GO:0021888 "hypothalamus gonadotrophin-releasing
hormone neuron development" evidence=IEA] [GO:0060613 "fat pad
development" evidence=IEA] [GO:0072520 "seminiferous tubule
development" evidence=IEA] [GO:0097009 "energy homeostasis"
evidence=IEA] InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
RGD:2321712 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
IPI:IPI00968459 Ensembl:ENSRNOT00000057671 ArrayExpress:F1M5P0
Uniprot:F1M5P0
Length = 60
Score = 94 (38.1 bits), Expect = 0.00031, P = 0.00031
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 18 QPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADNKVSEDGFLVVML 74
+PSDT+ VK I+D K+ P QQ LI GK L+D TL+D + ++ L ++L
Sbjct: 1 EPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 54
>UNIPROTKB|F1M4U4 [details] [associations]
symbol:F1M4U4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0008585 "female
gonad development" evidence=IEA] [GO:0010992 "ubiquitin
homeostasis" evidence=IEA] [GO:0021888 "hypothalamus
gonadotrophin-releasing hormone neuron development" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0060613 "fat pad development" evidence=IEA] [GO:0072520
"seminiferous tubule development" evidence=IEA] [GO:0097009 "energy
homeostasis" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019954 GO:GO:0022625 InterPro:IPR019956 PRINTS:PR00348
IPI:IPI00950621 Ensembl:ENSRNOT00000065032 ArrayExpress:F1M4U4
Uniprot:F1M4U4
Length = 59
Score = 94 (38.1 bits), Expect = 0.00031, P = 0.00031
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 18 QPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADNKVSEDGFLVVML 74
+PSDT+ VK I+D K+ P QQ LI GK L+D TL+D + ++ L ++L
Sbjct: 1 EPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 54
>UNIPROTKB|B5XFI8 [details] [associations]
symbol:ubl4aa "Ubiquitin-like protein 4A-A" species:8030
"Salmo salar" [GO:0005829 "cytosol" evidence=ISS] [GO:0071816
"tail-anchored membrane protein insertion into ER membrane"
evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT049807 ProteinModelPortal:B5XFI8 HOVERGEN:HBG072205
Uniprot:B5XFI8
Length = 154
Score = 104 (41.7 bits), Expect = 0.00032, P = 0.00032
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M LTVK L+G ++V + V VK+ + + + N P QQ L++ GK L DE L+
Sbjct: 1 MILTVKPLQGKECNVQVTEDEKVSTVKELVSE---RLNIPANQQRLLYKGKALADEHRLS 57
Query: 61 DNKVSEDGFL-VVMLSKSKTLGSAG 84
D + + L +V+ + G AG
Sbjct: 58 DYSIGPEAKLNLVVRPAGERSGVAG 82
>UNIPROTKB|C1BGZ8 [details] [associations]
symbol:ubl4aa "Ubiquitin-like protein 4A-A" species:8022
"Oncorhynchus mykiss" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT073877 ProteinModelPortal:C1BGZ8 Uniprot:C1BGZ8
Length = 154
Score = 104 (41.7 bits), Expect = 0.00032, P = 0.00032
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M LTVK L+G ++V + V VK+ + + + N P QQ L++ GK L DE L+
Sbjct: 1 MILTVKPLQGKECNVQVTEDEKVSTVKELVSE---RLNIPASQQRLLYKGKALADEHRLS 57
Query: 61 DNKVSEDGFL-VVMLSKSKTLGSAG 84
D + + L +V+ + G AG
Sbjct: 58 DYSIGPEAKLNLVVRPAGERSGVAG 82
>WB|WBGene00006727 [details] [associations]
symbol:ubq-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 EMBL:FO081045 GO:GO:0000003
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
GeneTree:ENSGT00550000074658 InterPro:IPR019956 PRINTS:PR00348
KO:K08770 OMA:TTINIKY EMBL:M23433 EMBL:M21321 PIR:A30126 PIR:T16144
RefSeq:NP_741157.1 ProteinModelPortal:P0CG71 SMR:P0CG71
PRIDE:P0CG71 EnsemblMetazoa:F25B5.4a.1 EnsemblMetazoa:F25B5.4a.2
EnsemblMetazoa:F25B5.4a.3 GeneID:175840 KEGG:cel:CELE_F25B5.4
CTD:175840 WormBase:F25B5.4a NextBio:889890 ArrayExpress:P0CG71
Uniprot:P0CG71
Length = 838
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 817
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 818 DYNIQKESTLHLVL 831
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 741
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 742 DYNIQKESTLHLVL 755
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 666 DYNIQKESTLHLVL 679
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 590 DYNIQKESTLHLVL 603
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 514 DYNIQKESTLHLVL 527
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SDT+ VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 438 DYNIQKESTLHLVL 451
>DICTYBASE|DDB_G0291928 [details] [associations]
symbol:ubqI "ubiquitin I" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213
dictyBase:DDB_G0291928 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
GO:GO:0005615 GenomeReviews:CM000155_GR EMBL:AAFI02000186
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 RefSeq:XP_629924.1
RefSeq:XP_645986.1 EnsemblProtists:DDB0233885
EnsemblProtists:DDB0238742 GeneID:8616931 GeneID:8628425
KEGG:ddi:DDB_G0269458 KEGG:ddi:DDB_G0291928 Uniprot:P0CG80
Length = 305
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>DICTYBASE|DDB_G0269458 [details] [associations]
symbol:ubqJ "ubiquitin J" species:44689
"Dictyostelium discoideum" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 dictyBase:DDB_G0269458 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 RefSeq:XP_629924.1
RefSeq:XP_645986.1 EnsemblProtists:DDB0233885
EnsemblProtists:DDB0238742 GeneID:8616931 GeneID:8628425
KEGG:ddi:DDB_G0269458 KEGG:ddi:DDB_G0291928 Uniprot:P0CG88
Length = 305
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>DICTYBASE|DDB_G0267452 [details] [associations]
symbol:sonA "ubiquilin domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
dictyBase:DDB_G0267452 Prosite:PS00299 GO:GO:0007275
GenomeReviews:CM000150_GR GO:GO:0045335 EMBL:AAFI02000003
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 eggNOG:COG5272 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 InterPro:IPR019956 PRINTS:PR00348 EMBL:AF214118
RefSeq:XP_647439.1 HSSP:P48510 ProteinModelPortal:Q9NIF3
STRING:Q9NIF3 EnsemblProtists:DDB0191158 GeneID:8616246
KEGG:ddi:DDB_G0267452 OMA:NPWASMF ProtClustDB:CLSZ2742967
Uniprot:Q9NIF3
Length = 523
Score = 94 (38.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
+K+ +K+ + F++ V+ TV KK I K + P QQ +I++G++LKD TL
Sbjct: 2 VKINIKSSTDNKFDVDVELGITVADFKKVIAT---KCSIPADQQRIIYSGRILKDHQTLD 58
Query: 61 DNKVSEDGFLV 71
+ K+ +DG V
Sbjct: 59 EIKI-QDGHTV 68
Score = 63 (27.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 268 GSEGDMFDQPEQDMPHAINVTPAEQE---AIQRLEAMGF-DRALVIEAFLACDRNEELAA 323
G G M + +N P EQ +++LE +GF DRA I A + + N LA
Sbjct: 459 GGMGGMGNNNSSTTRPPVNQEPPEQRFRLQLEQLEELGFVDRAANISALTSTNGNINLAI 518
Query: 324 NYLL 327
+ LL
Sbjct: 519 DRLL 522
>UNIPROTKB|G4MR36 [details] [associations]
symbol:MGG_09887 "NEDD8" species:242507 "Magnaporthe oryzae
70-15" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 InterPro:IPR019955 PROSITE:PS50053
EMBL:CM001231 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
KO:K12158 RefSeq:XP_003709980.1 ProteinModelPortal:G4MR36
SMR:G4MR36 EnsemblFungi:MGG_09887T0 GeneID:2680931
KEGG:mgr:MGG_09887 Uniprot:G4MR36
Length = 77
Score = 92 (37.4 bits), Expect = 0.00052, P = 0.00052
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M + V+TL G E+ ++ V +K+ +E+ K+ P QQ LI GK + D+ T A
Sbjct: 1 MLIKVRTLTGKEIELDIESDYKVSQIKEKVEE---KEGIPPVQQRLIFGGKQMVDDKTAA 57
Query: 61 DNKVSEDGFLVVMLS 75
D ++ L ++L+
Sbjct: 58 DYQLEGGSTLHLVLA 72
>TAIR|locus:2008950 [details] [associations]
symbol:RUB3 "AT1G11980" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 Prosite:PS00299 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC002131 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR019954 eggNOG:COG5272
InterPro:IPR019956 PRINTS:PR00348 HOGENOM:HOG000233942 KO:K12158
OMA:EPTDKVD IPI:IPI00524754 PIR:G86254 RefSeq:NP_172662.1
UniGene:At.51581 ProteinModelPortal:O65381 SMR:O65381
EnsemblPlants:AT1G11980.1 GeneID:837750 KEGG:ath:AT1G11980
TAIR:At1g11980 InParanoid:O65381 PhylomeDB:O65381
Genevestigator:O65381 Uniprot:O65381
Length = 78
Score = 92 (37.4 bits), Expect = 0.00052, P = 0.00052
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL +I ++ +DT+ +K+ IE+ K+ P Q +++ GK L D+ T
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEE---KEGIPPVHQRIVYTGKQLADDLTAK 57
Query: 61 DNKVSEDGFLVVMLS 75
+ L ++L+
Sbjct: 58 HYNLERGSVLHLVLA 72
>TAIR|locus:2014415 [details] [associations]
symbol:AT1G53950 "AT1G53950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006464 "cellular protein modification
process" evidence=ISS] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 EMBL:CP002684 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR019956 PRINTS:PR00348 IPI:IPI00525333
RefSeq:NP_175798.1 UniGene:At.37305 ProteinModelPortal:F4HTF5
SMR:F4HTF5 EnsemblPlants:AT1G53950.1 GeneID:841834
KEGG:ath:AT1G53950 OMA:GGPPVDQ ArrayExpress:F4HTF5 Uniprot:F4HTF5
Length = 216
Score = 108 (43.1 bits), Expect = 0.00060, P = 0.00060
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ V T+K F + V+ SDT+ +K I D G P QQ L H G LK+ T++
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGP---PVDQQDLNHLGTKLKNNATIS 197
Query: 61 DNKVSEDGFLVVM 73
D + D LV+M
Sbjct: 198 DYNIKPDANLVIM 210
>DICTYBASE|DDB_G0282369 [details] [associations]
symbol:ubqG "ubiquitin G" species:44689
"Dictyostelium discoideum" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 dictyBase:DDB_G0282369 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 OMA:IQKESTH EMBL:M23754
RefSeq:XP_640098.1 EnsemblProtists:DDB0214920 GeneID:8623629
KEGG:ddi:DDB_G0282369 Uniprot:P0CG79
Length = 381
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>DICTYBASE|DDB_G0282295 [details] [associations]
symbol:ubqA "ubiquitin A" species:44689
"Dictyostelium discoideum" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 dictyBase:DDB_G0282295 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 OMA:VHENTRR EMBL:M23748
EMBL:M19666 EMBL:M19491 PIR:A27806 PIR:B34080 RefSeq:XP_640258.1
ProteinModelPortal:P0CG76 EnsemblProtists:DDB0214921 GeneID:8623517
KEGG:ddi:DDB_G0282295 Uniprot:P0CG76
Length = 381
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEGSDNIENVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKTKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>DICTYBASE|DDB_G0279721 [details] [associations]
symbol:ubqH "ubiquitin H" species:44689
"Dictyostelium discoideum" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 dictyBase:DDB_G0279721 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000152_GR InterPro:IPR019955
PROSITE:PS50053 EMBL:AAFI02000032 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 PIR:C34080 RefSeq:XP_641560.1
ProteinModelPortal:P0CG81 EnsemblProtists:DDB0238741 GeneID:8622135
KEGG:ddi:DDB_G0279721 OMA:CSDNIEN Uniprot:P0CG81
Length = 381
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 77 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++ VKTL G + V+ SD + VK I+D K+ P QQ LI GK L+D TL+
Sbjct: 305 MQIFVKTLTGKTITLEVECSDNIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361
Query: 61 DNKVSEDGFLVVML 74
D + ++ L ++L
Sbjct: 362 DYNIQKESTLHLVL 375
>UNIPROTKB|C1BHN7 [details] [associations]
symbol:ubl4ab "Ubiquitin-like protein 4A-B" species:8022
"Oncorhynchus mykiss" [GO:0005829 "cytosol" evidence=ISS]
[GO:0071816 "tail-anchored membrane protein insertion into ER
membrane" evidence=ISS] [GO:0071818 "BAT3 complex" evidence=ISS]
InterPro:IPR000626 Pfam:PF00240 SMART:SM00213 Prosite:PS00299
GO:GO:0006810 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0071818
GO:GO:0071816 InterPro:IPR019954 InterPro:IPR019956 PRINTS:PR00348
EMBL:BT073633 EMBL:BT074116 ProteinModelPortal:C1BHN7
Uniprot:C1BHN7
Length = 151
Score = 101 (40.6 bits), Expect = 0.00074, P = 0.00074
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M LT+K LKG ++V + V VK+ + + + N P QQ L++ GK L DE L+
Sbjct: 1 MILTIKPLKGKECNVQVTEDEKVSMVKELVSE---RLNIPANQQRLLYKGKALADEYRLS 57
Query: 61 DNKVSEDGFL 70
D + + L
Sbjct: 58 DYSIGPEAKL 67
>UNIPROTKB|F1M516 [details] [associations]
symbol:F1M516 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000626
InterPro:IPR002906 Pfam:PF00240 Pfam:PF01599 SMART:SM00213
Prosite:PS00299 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019954
InterPro:IPR019956 PRINTS:PR00348 GeneTree:ENSGT00550000074763
IPI:IPI00561205 Ensembl:ENSRNOT00000036265 Uniprot:F1M516
Length = 158
Score = 102 (41.0 bits), Expect = 0.00077, P = 0.00077
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
+++ VK L G + V+PSDT+ VK I+D K+ P QQ LI GK +D L+
Sbjct: 7 LQIFVKALPGKTIMLEVEPSDTIEDVKAKIQD---KEGIPPDQQRLIFAGKQPEDGR-LS 62
Query: 61 DNKVSEDGFLVVMLSK 76
D + ++ L ++LS+
Sbjct: 63 DYNIQKESTLHLVLSR 78
>UNIPROTKB|F1SDV0 [details] [associations]
symbol:ZFAND4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR000626 Pfam:PF00240 Pfam:PF01428
PROSITE:PS51039 SMART:SM00154 SMART:SM00213 GO:GO:0046872
GO:GO:0008270 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR019956
PRINTS:PR00348 Gene3D:4.10.1110.10 OMA:HNSLVKP
GeneTree:ENSGT00510000046525 EMBL:CT990470 EMBL:CU927973
Ensembl:ENSSSCT00000011386 Uniprot:F1SDV0
Length = 715
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M+L ++TL G+ FE+RV P + ++ VK I+ ++G P QQ LI N L+D+ L+
Sbjct: 28 MELFIETLTGTCFELRVSPFEAIIYVKAKIQRLEG---IPICQQHLIWNNMELEDDYCLS 84
Query: 61 DNKVSEDGFLVVMLS 75
D +SE L ++L+
Sbjct: 85 DYNISEGCTLKLVLA 99
>TAIR|locus:505006342 [details] [associations]
symbol:DDI1 "DNA-damage inducible 1" species:3702
"Arabidopsis thaliana" [GO:0004190 "aspartic-type endopeptidase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR001995 InterPro:IPR009060 InterPro:IPR019103
Pfam:PF00240 Pfam:PF00627 Pfam:PF09668 PROSITE:PS50175
SMART:SM00213 GO:GO:0005829 GO:GO:0005634 GO:GO:0046686
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006508
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0004190 InterPro:IPR021109 SUPFAM:SSF50630
SUPFAM:SSF46934 eggNOG:NOG276681 HOGENOM:HOG000234736 KO:K11885
OMA:TVMTADE InterPro:IPR019956 PRINTS:PR00348 EMBL:BT025980
EMBL:AK226800 IPI:IPI00543877 RefSeq:NP_001189877.1
RefSeq:NP_566451.1 UniGene:At.39456 ProteinModelPortal:Q1EBV4
SMR:Q1EBV4 MEROPS:A28.A03 PaxDb:Q1EBV4 PRIDE:Q1EBV4
EnsemblPlants:AT3G13235.1 EnsemblPlants:AT3G13235.2 GeneID:820522
KEGG:ath:AT3G13235 TAIR:At3g13235 InParanoid:Q1EBV4
PhylomeDB:Q1EBV4 ProtClustDB:CLSN2688339 Genevestigator:Q1EBV4
Uniprot:Q1EBV4
Length = 414
Score = 87 (35.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
M++TV T + V +TV VK +E V+ N P QQ L++NG + + L+
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLE-VES--NVPIQQQQLLYNGNEMGNSDKLS 57
Query: 61 DNKVSEDGFLVVMLSKSKTLGSA 83
V +D L++M+S + + GSA
Sbjct: 58 ALGVKDDDLLMMMVSNASS-GSA 79
Score = 66 (28.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 277 PEQDMPHAINVTPA-EQEA-IQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
P P N + E EA I +L +GF R VI+A + NEE AA +L
Sbjct: 360 PTSQQPKRQNTSEGPEFEAKIAKLVELGFSRDSVIQALKLFEGNEEQAAGFL 411
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 335 257 0.00086 114 3 11 23 0.39 34
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 179
No. of states in DFA: 587 (62 KB)
Total size of DFA: 176 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.98u 0.09s 18.07t Elapsed: 00:00:01
Total cpu time: 18.00u 0.09s 18.09t Elapsed: 00:00:01
Start: Fri May 10 08:26:05 2013 End: Fri May 10 08:26:06 2013
WARNINGS ISSUED: 1