BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019817
         (335 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q84L33|RD23A_ARATH Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana
           GN=RAD23-1 PE=2 SV=3
          Length = 371

 Score =  473 bits (1218), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/379 (64%), Positives = 285/379 (75%), Gaps = 52/379 (13%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV PSDT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDET+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS 120
           +NKV+E+GFLVVMLSKSK+ GSAG +S Q +  + P +A +S++ P    + P    +  
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKP----AAPSTTQSSP 116

Query: 121 IPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA 180
           +PAS + +    A A +DTYGQAAS LV+G+ LEQ +QQIM+MGGG+WDKETVTRAL+AA
Sbjct: 117 VPASPIPAQEQPA-AQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAA 175

Query: 181 YNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAGAAPVSGVPNSSPLNMFPQET 240
           YNNPERAVDYLYSGIP+TAEVAVPV   P +Q A +GAA  AP SG PNSSPL++FPQET
Sbjct: 176 YNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQET 232

Query: 241 LSGAPAGGLGSLDFLRNNQQ---------------------------------------- 260
           ++ A +G LG+L+FLRNN Q                                        
Sbjct: 233 VAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEF 292

Query: 261 --LINEPVDGS--EGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 316
             L+NEP +GS  EGDMFDQPEQ+MPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD
Sbjct: 293 LQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACD 352

Query: 317 RNEELAANYLLENAGDFED 335
           RNEELAANYLLEN+GDFED
Sbjct: 353 RNEELAANYLLENSGDFED 371


>sp|Q84L32|RD23B_ARATH Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana
           GN=RAD23-2 PE=2 SV=2
          Length = 368

 Score =  414 bits (1064), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/382 (59%), Positives = 268/382 (70%), Gaps = 61/382 (15%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS 120
           +NKV+E+GFLVVMLSKSKT  SAG SS QP  TT  T + ++ + P    S+       +
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSI-------A 113

Query: 121 IPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAA 180
           +PASN T       A SDTYGQAAS LV+G+ +EQ +QQIM+MGGG+WDKETVTRAL+AA
Sbjct: 114 VPASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAA 173

Query: 181 YNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAG---AAPVSGVPNSSPLNMFP 237
           YNNPERAVDYLYSGIPET  +       PA+  +  G+     A P SG PNSSPL++FP
Sbjct: 174 YNNPERAVDYLYSGIPETVTI-------PATNLSGVGSGRELTAPPPSGGPNSSPLDLFP 226

Query: 238 QETLSGAPAGGLGSLDFLRNNQQ------------------------------------- 260
           QE +S A  G LG+L+FLR N Q                                     
Sbjct: 227 QEAVSDAAGGDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 286

Query: 261 -----LINEPVDGSEGD--MFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFL 313
                L+NEP +GS+GD  +FDQP+Q+MPH++NVTP EQE+I+RLEAMGFDRA+VIEAFL
Sbjct: 287 AEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAFL 346

Query: 314 ACDRNEELAANYLLENAGDFED 335
           +CDRNEELAANYLLE++ DFED
Sbjct: 347 SCDRNEELAANYLLEHSADFED 368


>sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana
           GN=RAD23-3 PE=2 SV=2
          Length = 419

 Score =  315 bits (808), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 194/423 (45%), Positives = 252/423 (59%), Gaps = 92/423 (21%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           MK+ VKTLKG+HFEI V+P D+V+ VKKNIE VQG D YP  +Q+LIH GKVLKDETT+ 
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  DNKVSEDGFLVVMLSKSK------TLGSAGASSAQ--PAHTTPPTTAPSSNST------- 105
           +NKV+E+ F+V+M++KSK      +  SAG S A+  P  T+ P+ +P + ++       
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 106 ------------------PPQEASVPPPAPTP-SIPASNVTSNVTAANANSDTYGQAASN 146
                               +  + P P P P +I +S    +     +  D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 147 LVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEVAVPVA 206
           L AG++LE TIQQI+DMGGGTWD+ETV  AL+AA+NNPERAV+YLY+GIPE AEV  PVA
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP-PVA 239

Query: 207 HFPASQA------AETGAAGAAPVSGVPNSSPLNMFPQ--ETLSGAPAGGLGSLDFLRNN 258
             PAS        A+T    AAP SG PN++PL++FPQ    + G P  G G+LDFLRN+
Sbjct: 240 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNP--GAGTLDFLRNS 296

Query: 259 QQ------------------------------------------LINEPVD--GSEGDMF 274
           QQ                                          LINEPV+  G  G++ 
Sbjct: 297 QQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLL 356

Query: 275 DQPEQDM--PHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 332
            Q    M  P AI VT  E+EAI+RLEAMGF+RALV+E F AC++NEELAANYLL++  +
Sbjct: 357 GQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHE 416

Query: 333 FED 335
           FE+
Sbjct: 417 FEE 419


>sp|Q84L30|RD23D_ARATH Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana
           GN=RAD23-4 PE=2 SV=2
          Length = 378

 Score =  313 bits (801), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/395 (47%), Positives = 242/395 (61%), Gaps = 78/395 (19%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           MK+ VKTL GS+FEI V+P+D V  VK  IE V+G + YP  +Q+LIH GKVLKDETTL 
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPP-PAPTP 119
           +N V E+ F+V+MLSK+K    +GAS+A         +AP+ ++T PQ  + P   APT 
Sbjct: 60  ENNVVENSFIVIMLSKTKA-SPSGASTA---------SAPAPSATQPQTVATPQVSAPTA 109

Query: 120 SIPA-----SNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETVT 174
           S+P      +   +  TAA+  +D YGQAASNLVAG  LE T+QQI+DMGGG+WD++TV 
Sbjct: 110 SVPVPTSGTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVV 169

Query: 175 RALQAAYNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAGAAPV---------- 224
           RAL+AA+NNPERAV+YLYSGIP  AE+       P +QA  TG   A P+          
Sbjct: 170 RALRAAFNNPERAVEYLYSGIPAQAEIP------PVAQAPATGEQAANPLAQPQQAAAPA 223

Query: 225 --SGVPNSSPLNMFPQETLSGAPAGGLGSLDFLRNNQQ---------------------- 260
             +G PN++PLN+FPQ   +     G G+LDFLRN+QQ                      
Sbjct: 224 AATGGPNANPLNLFPQGMPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQEL 283

Query: 261 --------------------LINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEA 300
                               LINEPV+G E  M +Q E  MP A+ VTP E+EAI+RLE 
Sbjct: 284 GKQNPQLVRLIQEHQADFLRLINEPVEGEENVM-EQLEAAMPQAVTVTPEEREAIERLEG 342

Query: 301 MGFDRALVIEAFLACDRNEELAANYLLENAGDFED 335
           MGFDRA+V+E F AC++NEELAANYLL++  +FED
Sbjct: 343 MGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377


>sp|Q40742|RAD23_ORYSJ Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica
           GN=RAD23 PE=1 SV=2
          Length = 392

 Score =  295 bits (755), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 176/390 (45%), Positives = 233/390 (59%), Gaps = 57/390 (14%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           MK++VKTLKGS F+I V  +  V  VK+ IE  QG+  YP  QQ+LIH GKVLKD+TTL 
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  DNKVSEDGFLVVMLSKSK-TLGSAGASSAQPAHTTPPT----TAPSSNS--TPPQEASVP 113
           +NKV E+ FLV+ML + K +  SA A+S  P++  PPT     AP+S +   P     V 
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVT 120

Query: 114 PPAPTPSIPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKETV 173
             APTP+  AS   +   A ++ +D YGQA SNLVAG++LE TIQ I++MGGG WD++ V
Sbjct: 121 VSAPTPTATASPAPA--VAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIV 178

Query: 174 TRALQAAYNNPERAVDYLYSGIPETAEVAVPVAHF----PASQAAETGAAGAAPVSGVPN 229
             AL AA+NNPERAV+YLYSG+PE  ++ VP        P   +  T  A  + +S  PN
Sbjct: 179 LHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSGPN 238

Query: 230 SSPLNMFPQETLSGAP-AGGLGSLDFLRNNQQ---------------------------- 260
           +SPL++FPQ   + +  A GLG+LD LRNN Q                            
Sbjct: 239 ASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQ 298

Query: 261 --------------LINEPVDG-SEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDR 305
                         LINEP +G  E ++ DQ  + MP  I VTP E EAI RLEAMGFDR
Sbjct: 299 ILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDR 358

Query: 306 ALVIEAFLACDRNEELAANYLLENAGDFED 335
           ALV++ F AC+++E+LAANYLL++  +F+D
Sbjct: 359 ALVLDVFFACNKDEQLAANYLLDHMNEFDD 388


>sp|P54725|RD23A_HUMAN UV excision repair protein RAD23 homolog A OS=Homo sapiens
           GN=RAD23A PE=1 SV=1
          Length = 363

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/369 (34%), Positives = 200/369 (54%), Gaps = 47/369 (12%)

Query: 3   LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
           +T+KTL+   F+IR++P +TV  +K+ IE  +G+D +P   Q LI+ GK+L D+  + D 
Sbjct: 5   ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64

Query: 63  KVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEA---SVPPPA--- 116
           ++ E  F+VVM++K+K    AG  ++ P   +P     SS S PP      S PPPA   
Sbjct: 65  RIDEKNFVVVMVTKTK----AGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARE 120

Query: 117 -PTPSIPASNVTS-----NVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDK 170
             +PS  ++  TS         ++ +S     AAS LV G++ E  + +IM MG   +++
Sbjct: 121 DKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMG---YER 177

Query: 171 ETVTRALQAAYNNPERAVDYLYSGIPETAEVAV-PVAHFPASQAAETGAAGAAPVSGV-- 227
           E V  AL+A+YNNP RAV+YL +GIP + E     V     S+   T AAG  P+  +  
Sbjct: 178 ERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRD 237

Query: 228 -PNSSPLNMFPQETLSGAPAGGLGS-------LDFLRNNQ----QLINEP---------V 266
            P    +    Q+  +  PA            L  +  +Q    Q++NEP         V
Sbjct: 238 QPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDV 297

Query: 267 DGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYL 326
           +G  G + ++  Q   + I VTP E+EAI+RL+A+GF  +LVI+A+ AC++NE LAAN+L
Sbjct: 298 EGEVGAIGEEAPQM--NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFL 355

Query: 327 LENAGDFED 335
           L  + +F+D
Sbjct: 356 L--SQNFDD 362


>sp|P54727|RD23B_HUMAN UV excision repair protein RAD23 homolog B OS=Homo sapiens
           GN=RAD23B PE=1 SV=1
          Length = 409

 Score =  166 bits (419), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 194/421 (46%), Gaps = 103/421 (24%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++T+KTL+   F+I + P +TV A+K+ IE  +GKD +P   Q LI+ GK+L D+T L 
Sbjct: 1   MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQ------------------------------- 89
           + K+ E  F+VVM++K K + +   ++ Q                               
Sbjct: 61  EYKIDEKNFVVVMVTKPKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPT 120

Query: 90  --PAHTTPPTTAPSSNSTP----PQEASVPPPAPTPSIPASNVTSNVTAANANSDTYGQA 143
             PA  TP +   SS   P     QE     PA TP   +   T + +  ++ S+ +  A
Sbjct: 121 STPASITPASATASSEPAPASAAKQEKPAEKPAETPVATSPTATDSTSGDSSRSNLFEDA 180

Query: 144 ASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIP---ETAE 200
            S LV G   E  + +IM MG   +++E V  AL+A++NNP+RAV+YL  GIP   E+  
Sbjct: 181 TSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQA 237

Query: 201 VAVPVAHFPASQAAETGA---------------------AGAAPVSGV---PNSSPLNMF 236
           V  P       QAA TGA                     +G  P+  +   P    +   
Sbjct: 238 VVDP------PQAASTGAPQSSAVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQI 291

Query: 237 PQETLSGAPA--GGLGSLDFLRNNQQLINEPVDGSEG--DMFDQPEQDMP---------- 282
            Q+  S  PA    +G     R N QL+ +     E    M ++P Q+            
Sbjct: 292 IQQNPSLLPALLQQIG-----RENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGS 346

Query: 283 -----------HAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAG 331
                      + I VTP E+EAI+RL+A+GF   LVI+A+ AC++NE LAAN+LL+   
Sbjct: 347 GGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNF 406

Query: 332 D 332
           D
Sbjct: 407 D 407


>sp|A3KMV2|RD23A_BOVIN UV excision repair protein RAD23 homolog A OS=Bos taurus GN=RAD23A
           PE=2 SV=1
          Length = 362

 Score =  165 bits (418), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 200/368 (54%), Gaps = 46/368 (12%)

Query: 3   LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
           +T+KTL+   F+IR++P +TV  +K+ IE  +G+D +P   Q LI+ GK+L D+  + D 
Sbjct: 5   ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIRDY 64

Query: 63  KVSEDGFLVVMLSKSKTL-GSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPA----P 117
           ++ E  F+VVM++K+KT  G++  S A P  T  P ++ S  S P    S PPP      
Sbjct: 65  RIDEKNFVVVMVTKAKTSPGTSVPSEASPTAT--PESSTSFPSAPASGMSHPPPTAREDK 122

Query: 118 TPSIPASNVTS-----NVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKET 172
           +PS  ++  TS         ++ +      AAS LV G++ E  + +IM MG   +++E 
Sbjct: 123 SPSEESAPTTSPESVSGSVPSSGSGGREEDAASTLVTGSEYETMLTEIMSMG---YERER 179

Query: 173 VTRALQAAYNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAE--TGAAGAAPVSGV--- 227
           V  AL+A+YNNP RAV+YL +GIP + E          SQ +E  +  AG  P+  +   
Sbjct: 180 VVAALRASYNNPHRAVEYLLTGIPGSPEPE--HGSVQESQVSEQPSTEAGENPLEFLRDQ 237

Query: 228 PNSSPLNMFPQETLSGAPAGGLGS-------LDFLRNNQ----QLINEP---------VD 267
           P    +    Q+  +  PA            L  +  +Q    Q++NEP         V+
Sbjct: 238 PQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELVDISDVE 297

Query: 268 GSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL 327
           G  G + ++  Q   + I VTP E+EAI+RL+A+GF  +LVI+A+ AC++NE LAAN+LL
Sbjct: 298 GEVGAIGEEAPQM--NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLL 355

Query: 328 ENAGDFED 335
             + +F+D
Sbjct: 356 --SQNFDD 361


>sp|P54726|RD23A_MOUSE UV excision repair protein RAD23 homolog A OS=Mus musculus
           GN=Rad23a PE=1 SV=2
          Length = 363

 Score =  161 bits (407), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/371 (34%), Positives = 196/371 (52%), Gaps = 51/371 (13%)

Query: 3   LTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLADN 62
           +T+KTL+   F+IR++P +TV  +K+ IE  +G+D +P   Q LI+ GK+L D+  + + 
Sbjct: 5   ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIKEY 64

Query: 63  KVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEA---SVPPPA--- 116
            + E  F+VVM++K+K    AG     P   +P      S   PP  A   S PPP    
Sbjct: 65  HIDEKNFVVVMVTKAK----AGQGIPAPPEASPTAVPEPSTPFPPVLASGMSHPPPTSRE 120

Query: 117 -PTPSIPASNVTS-----NVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDK 170
             +PS  ++  TS         ++ +S     AAS LV G++ E  + +IM MG   +++
Sbjct: 121 DKSPSEESTTTTSPESISGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMG---YER 177

Query: 171 ETVTRALQAAYNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAE---TGAAGAAPVSGV 227
           E V  AL+A+YNNP RAV+YL +GIP + E          SQA E   T AAG  P+  +
Sbjct: 178 ERVVAALRASYNNPHRAVEYLLTGIPGSPEPE--HGSVQESQAPEQPATEAAGENPLEFL 235

Query: 228 ---PNSSPLNMFPQETLSGAPAGGLGS-------LDFLRNNQ----QLINEP-------- 265
              P    +    Q+  +  PA            L  +  +Q    Q++NEP        
Sbjct: 236 RDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADIS 295

Query: 266 -VDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAAN 324
            V+G  G + ++  Q   + I VTP E+EAI+RL+A+GF  +LVI+A+ AC++NE LAAN
Sbjct: 296 DVEGEVGAIGEEAPQM--NYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAAN 353

Query: 325 YLLENAGDFED 335
           +LL  + +F+D
Sbjct: 354 FLL--SQNFDD 362


>sp|Q4KMA2|RD23B_RAT UV excision repair protein RAD23 homolog B OS=Rattus norvegicus
           GN=Rad23b PE=1 SV=1
          Length = 415

 Score =  160 bits (406), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 192/423 (45%), Gaps = 101/423 (23%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++T+KTL+   F+I + P +TV A+K+ IE  +GKD +P   Q LI+ GK+L D+T L 
Sbjct: 1   MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALK 60

Query: 61  DNKVSEDGFLVVMLSKSKTLGSA---------------------------------GASS 87
           + K+ E  F+VVM++K K + SA                                  A +
Sbjct: 61  EYKIDEKNFVVVMVTKPKAVTSAVPATTQQSSSPSTTTVSSSPAAAVAQAPAPTPALAPT 120

Query: 88  AQPAHTTPPTTAPSSNSTPP----QEASVPPPAPTPSIPASNVTSNVTAANANSDTYGQA 143
           + PA TTP +T  SS   P      E     PA TP + +     +    ++ S+ +  A
Sbjct: 121 STPASTTPASTTASSEPAPTGATQPEKPAEKPAQTPVLTSPAPADSTPGDSSRSNLFEDA 180

Query: 144 ASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEVAV 203
            S LV G   E  + +IM MG   +++E V  AL+A++NNP+RAV+YL  GIP   E   
Sbjct: 181 TSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQA 237

Query: 204 PVAHFPASQAAETGA--------------------AGAAPVSGV---PNSSPLNMFPQET 240
            V   P  QA  TG                     +G  P+  +   P    +    Q+ 
Sbjct: 238 VVD--PPPQAVSTGTPQSPAVAAAAATTTATTTTTSGGHPLEFLRNQPQFQQMRQIIQQN 295

Query: 241 LSGAPA--GGLGSLDFLRNNQQLINEPVDGSEG--DMFDQPEQDMP-------------- 282
            S  PA    +G     R N QL+ +     E    M ++P Q+                
Sbjct: 296 PSLLPALLQQIG-----RENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGGGGGG 350

Query: 283 -------------HAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEN 329
                        + I VTP E+EAI+RL+A+GF   LVI+A+ AC++NE LAAN+LL+ 
Sbjct: 351 GGGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQ 410

Query: 330 AGD 332
             D
Sbjct: 411 NFD 413


>sp|Q29RK4|RD23B_BOVIN UV excision repair protein RAD23 homolog B OS=Bos taurus GN=RAD23B
           PE=2 SV=1
          Length = 408

 Score =  158 bits (399), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 193/417 (46%), Gaps = 96/417 (23%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M +T+KTL+   F+I + P +TV A+K+ IE  +GKD +P   Q LI+ GK+L D+T L 
Sbjct: 1   MLVTLKTLQQQTFKIDIDPDETVRALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK 60

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTT---------------------- 98
           + K+ E  F+VVM++K K + +   ++ Q +++   TT                      
Sbjct: 61  EYKIDEKNFVVVMVTKPKAVTTPAPATTQQSNSAATTTVSSSTAPAVTQAPAPAPASAPT 120

Query: 99  --------APSSNSTPP-------QEASVPPPAPTPSIPASNVTSNVTAANANSDTYGQA 143
                   AP++ S+ P       QE     P  TP       T + +  ++ S+ +  A
Sbjct: 121 PTPVSVTPAPTTASSEPAPASAAKQEKPAERPVETPVATTPTSTDSTSGDSSRSNLFEDA 180

Query: 144 ASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEVAV 203
            S LV G   E  + +IM MG   +++E V  AL+A++NNP+RAV+YL  GIP   E   
Sbjct: 181 TSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQA 237

Query: 204 PVAHFPASQAAETGA--------------------AGAAPVSGV---PNSSPLNMFPQET 240
            V   PA   A TGA                    +G  P+  +   P    +    Q+ 
Sbjct: 238 VVDPPPA---ASTGAPQSSVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQN 294

Query: 241 LSGAPA--GGLGSLDFLRNNQQLINEPVDGSEG--DMFDQPEQDMP-------------- 282
            S  PA    +G     R N QL+ +     E    M ++P Q+                
Sbjct: 295 PSLLPALLQQIG-----RENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIA 349

Query: 283 -------HAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 332
                  + I VTP E+EAI+RL+A+GF   LVI+A+ AC++NE LAAN+LL+   D
Sbjct: 350 EAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFD 406


>sp|O74803|RHP23_SCHPO UV excision repair protein rhp23 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=rhp23 PE=1 SV=1
          Length = 368

 Score =  132 bits (332), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 182/391 (46%), Gaps = 81/391 (20%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M LT K L+   F I    +DT ++  K  E +Q + NY   +Q LI++G++L D+ T+ 
Sbjct: 1   MNLTFKNLQQQKFVISDVSADTKISELK--EKIQTQQNYEVERQKLIYSGRILADDKTVG 58

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPTPS 120
           +  + E  F+V M+S+ KT           + +TP + A  + + P         AP+ +
Sbjct: 59  EYNIKEQDFIVCMVSRPKT-----------STSTPKSAASPAPNPPASVPEKKVEAPSST 107

Query: 121 IPASNVTSNVTAANA--NSDTYGQA-----ASNLVAGNDLEQTIQQIMDMGGGTWDKETV 173
           +  S  T+   AA A  N DT   +     A+ L  G      ++ +++MG   +++  V
Sbjct: 108 VAESTSTTQTVAAAAPSNPDTTATSEAPIDANTLAVGAQRNVAVENMVEMG---YERSEV 164

Query: 174 TRALQAAYNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAGAAPVSGVPNSSPL 233
            RA++AA+NNP+RAV+YL +GIPE            A  A +  +   AP S      P 
Sbjct: 165 ERAMRAAFNNPDRAVEYLLTGIPEDILNRQREESAAALAAQQQQSEALAPTS---TGQPA 221

Query: 234 NMFPQETLS-----GAPAGGLGS--LDFLRN-------------NQQLINEPV------- 266
           N+F Q  LS       P+  +G   L FLR+             N Q++   +       
Sbjct: 222 NLFEQAALSENENQEQPSNTVGDDPLGFLRSIPQFQQLRQIVQQNPQMLETILQQIGQGD 281

Query: 267 -------------------DGSEGDMFDQPEQDMPHA---INVTPAEQEAIQRLEAMGFD 304
                              +G+EG      E  +P     I +T  E E+I RL  +GFD
Sbjct: 282 PALAQAITQNPEAFLQLLAEGAEG------ESALPSGGIQIQITQEESESIDRLCQLGFD 335

Query: 305 RALVIEAFLACDRNEELAANYLLENAGDFED 335
           R +VI+A+LACD+NEELAANYL E+  + ED
Sbjct: 336 RNIVIQAYLACDKNEELAANYLFEHGHESED 366


>sp|P54728|RD23B_MOUSE UV excision repair protein RAD23 homolog B OS=Mus musculus
           GN=Rad23b PE=1 SV=2
          Length = 416

 Score =  132 bits (331), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 191/420 (45%), Gaps = 94/420 (22%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++T+KTL+   F+I + P +TV A+K+ IE  +GKD +P   Q LI+ GK+L D+T L 
Sbjct: 1   MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALK 60

Query: 61  DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHT--------------------------- 93
           + K+ E  F+VVM++K K + +A  ++ QP+ T                           
Sbjct: 61  EYKIDEKNFVVVMVTKPKAVTTAVPATTQPSSTPSPTAVSSSPAVAAAQAPAPTPALPPT 120

Query: 94  -TPPTTAPSS---NSTP-PQEASVP-----PPAPTPSIPASNVTSNVTAANANSDTYGQA 143
            TP +TAP+S   +S P P  A+ P      PA TP + +     +    ++ S+ +  A
Sbjct: 121 STPASTAPASTTASSEPAPAGATQPEKPAEKPAQTPVLTSPAPADSTPGDSSRSNLFEDA 180

Query: 144 ASNLVAGNDLEQTIQQIMDMGGGTWDKETVT------------------------RALQA 179
            S LV G   E  + +IM MG   +++E V                         R  QA
Sbjct: 181 TSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQA 237

Query: 180 AYNNPERAVDYLYSGIPETAEVAVPVAHFPASQAAETGAAGAAPVSGVPNSSPLNMFPQE 239
             + P +AV    +G P++  VA   A   A+    +G      +   P    +    Q+
Sbjct: 238 VVDPPPQAVS---TGTPQSPAVAAAAATTTATTTTTSGGHPLEFLRNQPQFQQMRQIIQQ 294

Query: 240 TLSGAPA--GGLGS-----LDFLRNNQ----QLINEPVD--GSEGDMFDQPEQDMP---- 282
             S  PA    +G      L  +  +Q    Q++NEPV   GS+G               
Sbjct: 295 NPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGSQGGGGGGGGGGGGGGGG 354

Query: 283 ----------HAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 332
                     + I VTP E+EAI+RL+A+GF   LVI+A+ AC++NE LAAN+LL+   D
Sbjct: 355 GIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFD 414


>sp|Q54LV1|RAD23_DICDI UV excision repair protein RAD23 homolog OS=Dictyostelium
           discoideum GN=rcbA PE=1 SV=1
          Length = 342

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 23/202 (11%)

Query: 142 QAASNLVAGNDLEQTIQQIMDMGGGTWDKETVTRALQAAYNNPERAVDYLYSGIPETAEV 201
           Q +S+   G +LE TI+ I DMG   + ++ V RAL+  +NN ERA++YL SG       
Sbjct: 152 QQSSDFATGTELEATIKNITDMG---FARDQVLRALRLTFNNAERAIEYLVSG------- 201

Query: 202 AVPVAHFPASQAAETGAAGAA--PVSGVPNSSPLNMFPQETLSGAPA---GGLGSLD--- 253
            +P A+ P  +    G  G+   P   + N    N+  +E +S  P+   G L  L    
Sbjct: 202 NIPAANDPEDEEEMEGGGGSGDNPFEALRNHPHFNLL-REAISKNPSIIPGILQQLAQTN 260

Query: 254 --FLRNNQQLINEPVDGSEGDMFDQPEQDMPHAINVTPAEQEAIQRLEAM-GFDRALVIE 310
              +R  Q+  NE +   +GD  +         + VT  E EAIQRL+A+ G D++ VIE
Sbjct: 261 PALVRQIQENPNEFIRLFQGDG-NPGGNPGQFTLQVTQEESEAIQRLQALTGMDKSTVIE 319

Query: 311 AFLACDRNEELAANYLLENAGD 332
           A+ ACD+NEEL A+YL E A D
Sbjct: 320 AYFACDKNEELTASYLFETADD 341


>sp|P32628|RAD23_YEAST UV excision repair protein RAD23 OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=RAD23 PE=1 SV=1
          Length = 398

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 27/206 (13%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPC--GQQLLIHNGKVLKDETT 58
           + LT K  K     + ++PS+T++  K  +       +  C   Q  LI++GKVL+D  T
Sbjct: 2   VSLTFKNFKKEKVPLDLEPSNTILETKTKL-----AQSISCEESQIKLIYSGKVLQDSKT 56

Query: 59  LADNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASVPPPAPT 118
           +++  + +   +V M+S+ K+  +           T P  AP S +TP +E S    +P+
Sbjct: 57  VSECGLKDGDQVVFMVSQKKSTKT---------KVTEPPIAPESATTPGRENSTEA-SPS 106

Query: 119 PSIPASNVTSNVTAANANSD-------TYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKE 171
               A+   +    +    +       T   +    V G +  +TI++IM+MG   + +E
Sbjct: 107 TDASAAPAATAPEGSQPQEEQTATTERTESASTPGFVVGTERNETIERIMEMG---YQRE 163

Query: 172 TVTRALQAAYNNPERAVDYLYSGIPE 197
            V RAL+AA+NNP+RAV+YL  GIPE
Sbjct: 164 EVERALRAAFNNPDRAVEYLLMGIPE 189



 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 36/57 (63%)

Query: 276 QPEQDMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENAGD 332
           Q E +    ++ TP + +AI RL  +GF+R LVI+ + ACD+NEE AAN L  +  D
Sbjct: 342 QGEGEGSFQVDYTPEDDQAISRLCELGFERDLVIQVYFACDKNEEAAANILFSDHAD 398


>sp|Q05120|UBIL_NPVOP Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid
          polyhedrosis virus GN=V-UBI PE=3 SV=1
          Length = 93

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    +  +P DTV  VK+ I D   K+  P  QQ LI+ GK L+D  TLA
Sbjct: 1  MQIFVKTLTGKTITVETEPGDTVGQVKQKIAD---KEGVPVDQQRLIYAGKQLEDAQTLA 57

Query: 61 DNKVSEDGFLVVML 74
          D  + ++  L ++L
Sbjct: 58 DYNIQKESTLHMVL 71


>sp|Q4PLJ0|NEDD8_RABIT NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1
          Length = 81

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M + VKTL G   EI ++P+D V  +K+ +E+   K+  P  QQ LI++GK + DE T A
Sbjct: 1  MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57

Query: 61 DNKVSEDGFLVVMLS 75
          D K+     L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72


>sp|Q15843|NEDD8_HUMAN NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1
          Length = 81

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M + VKTL G   EI ++P+D V  +K+ +E+   K+  P  QQ LI++GK + DE T A
Sbjct: 1  MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57

Query: 61 DNKVSEDGFLVVMLS 75
          D K+     L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72


>sp|P61282|NEDD8_BOVIN NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1
          Length = 81

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M + VKTL G   EI ++P+D V  +K+ +E+   K+  P  QQ LI++GK + DE T A
Sbjct: 1  MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57

Query: 61 DNKVSEDGFLVVMLS 75
          D K+     L ++L+
Sbjct: 58 DYKILGGSVLHLVLA 72


>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
          Length = 356

 Score = 51.6 bits (122), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 32/207 (15%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+ SDT+  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 153 MQIFVKTLTGKTIALEVESSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 209

Query: 61  DNKVSEDGFLVVMLSKS-------KTL-GSAGASSAQPAHTTPPTTAPSSNSTPPQEASV 112
           D  + ++  L ++L          KTL G   A   + + T     A   +     +  +
Sbjct: 210 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQD-----KEGI 264

Query: 113 PPPAPTPSIPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQIMDMGGGTWDKET 172
           PP           +    T A+ N                 E T+  ++ + GG    E 
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLADYNIQK--------------ESTLHLVLRLRGGVM--EP 308

Query: 173 VTRALQAAYNNPERAVDYLYSGIPETA 199
              AL   YN  ++     Y+ +P  A
Sbjct: 309 TLEALAKKYNWEKKVCRRCYARLPVRA 335



 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+ SDT+  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 1  MQIFVKTLTGKTIALEVESSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+ SDT+  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 77  MQIFVKTLTGKTIALEVESSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148


>sp|A4QND0|UBL4A_XENTR Ubiquitin-like protein 4A OS=Xenopus tropicalis GN=ubl4a PE=2
          SV=1
          Length = 148

 Score = 51.2 bits (121), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M+LTVK LKG    I+V   DTV+AVK+ +E+   K   P  QQ L+  GK L DE  LA
Sbjct: 1  MQLTVKALKGKEANIQVSEGDTVLAVKRLVEE---KLKVPVSQQRLLFRGKALADEHCLA 57

Query: 61 DNKV 64
             +
Sbjct: 58 HYSI 61


>sp|Q71UE8|NEDD8_RAT NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1
          Length = 81

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M + VKTL G   EI ++P+D V  +K+ +E+   K+  P  QQ LI++GK + DE T A
Sbjct: 1  MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57

Query: 61 DNKV 64
          D K+
Sbjct: 58 DYKI 61


>sp|P29595|NEDD8_MOUSE NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2
          Length = 81

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M + VKTL G   EI ++P+D V  +K+ +E+   K+  P  QQ LI++GK + DE T A
Sbjct: 1  MLIKVKTLTGKEIEIDIEPTDKVERIKERVEE---KEGIPPQQQRLIYSGKQMNDEKTAA 57

Query: 61 DNKV 64
          D K+
Sbjct: 58 DYKI 61


>sp|P62975|UBIQ_RABIT Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1
          Length = 76

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVML 74
          D  + ++  L ++L
Sbjct: 58 DYNIQKESTLHLVL 71


>sp|P68197|UBIQ_CERCA Ubiquitin OS=Ceratitis capitata PE=1 SV=1
          Length = 76

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVML 74
          D  + ++  L ++L
Sbjct: 58 DYNIQKESTLHLVL 71


>sp|Q865C5|UBIQ_CAMDR Ubiquitin OS=Camelus dromedarius PE=3 SV=2
          Length = 76

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVML 74
          D  + ++  L ++L
Sbjct: 58 DYNIQKESTLHLVL 71


>sp|P79781|RS27A_CHICK Ubiquitin-40S ribosomal protein S27a OS=Gallus gallus GN=RPS27A
          PE=2 SV=3
          Length = 156

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|P62976|UBIQP_CRIGR Polyubiquitin OS=Cricetulus griseus PE=2 SV=2
          Length = 658

 Score = 50.8 bits (120), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D QG    P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQG---IPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528


>sp|P62979|RS27A_HUMAN Ubiquitin-40S ribosomal protein S27a OS=Homo sapiens GN=RPS27A
          PE=1 SV=2
          Length = 156

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|P62978|RS27A_CAVPO Ubiquitin-40S ribosomal protein S27a OS=Cavia porcellus GN=RPS27A
          PE=1 SV=2
          Length = 156

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|P62992|RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a OS=Bos taurus GN=RPS27A PE=1
          SV=2
          Length = 156

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|P62982|RS27A_RAT Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus
          GN=Rps27a PE=1 SV=2
          Length = 156

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|P62983|RS27A_MOUSE Ubiquitin-40S ribosomal protein S27a OS=Mus musculus GN=Rps27a
          PE=1 SV=2
          Length = 156

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|P68200|RS27A_ICTPU Ubiquitin-40S ribosomal protein S27a OS=Ictalurus punctatus
          GN=rps27a PE=2 SV=2
          Length = 156

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTP 95
          D  + ++  L ++L     L        + ++TTP
Sbjct: 58 DYNIQKESTLHLVLR----LRGGAKKRKKKSYTTP 88


>sp|Q9VJ33|NEDD8_DROME NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1
          Length = 84

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M + VKTL G   EI ++P+D V  +K+ +E+   K+  P  QQ LI +GK + D+ T A
Sbjct: 1  MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEE---KEGIPPQQQRLIFSGKQMNDDKTAA 57

Query: 61 DNKVSEDGFLVVMLS 75
          D KV     L ++L+
Sbjct: 58 DYKVQGGSVLHLVLA 72


>sp|Q0D261|UBL4A_XENLA Ubiquitin-like protein 4A OS=Xenopus laevis GN=ubl4a PE=2 SV=1
          Length = 148

 Score = 50.1 bits (118), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M+LTVK LKG    I+V   DTV+AVK+ +E+   K   P  QQ L+  GK L DE  L+
Sbjct: 1  MQLTVKALKGKEAHIQVSEGDTVLAVKRLVEE---KLQVPVSQQRLLFRGKSLADEHCLS 57

Query: 61 DNKV 64
             +
Sbjct: 58 HYSI 61


>sp|Q8SWD4|UBIQ_ENCCU Ubiquitin OS=Encephalitozoon cuniculi (strain GB-M1)
          GN=ECU02_0740i PE=1 SV=1
          Length = 77

 Score = 50.1 bits (118), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSD++  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDSIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVML 74
          D  + ++  L ++L
Sbjct: 58 DYNIQKESTLHLVL 71


>sp|P15357|RS27A_DROME Ubiquitin-40S ribosomal protein S27a OS=Drosophila melanogaster
          GN=RpS27A PE=1 SV=2
          Length = 156

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72


>sp|P0CG54|UBB_CAVPO Polyubiquitin-B OS=Cavia porcellus GN=UBB PE=2 SV=1
          Length = 311

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300


>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
          Length = 423

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + VQ SDTV  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 42  MQIFVKTLTGKTITLEVQSSDTVENVKSKIQD---KEGIPPDQQRLIFAGKQLEDGLTLA 98

Query: 61  DNKVSEDGFLVVML 74
           D  + ++  L ++L
Sbjct: 99  DYNIQKESTLHLVL 112



 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+ SDTV  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 118 MQIFVKTLTGKTITLEVESSDTVENVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 174

Query: 61  DNKVSEDGFLVVML 74
           D  + ++  L ++L
Sbjct: 175 DYNIQKESTLHLVL 188



 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+ SDTV  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 194 MQIFVKTLTGKTITLEVESSDTVENVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 250

Query: 61  DNKVSEDGFLVVML 74
           D  + ++  L ++L
Sbjct: 251 DYNIQKESTLHLVL 264



 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+ SDTV  VK  I+D   K+  P  QQ LI  GK L+D  TLA
Sbjct: 270 MQIFVKTLTGKTITLEVESSDTVENVKSKIQD---KEGIPPDQQRLIFAGKQLEDGRTLA 326

Query: 61  DNKVSEDGFLVVML 74
           D  + ++  L ++L
Sbjct: 327 DYNIQKESTLHLVL 340



 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+ SDTV  VK  I+D   K+  P  QQ +I  GK L+D  TLA
Sbjct: 346 MQIFVKTLTGKTITLEVESSDTVENVKSKIQD---KEGIPPDQQRIIFAGKQLEDGRTLA 402

Query: 61  DNKVSEDGFLVVML 74
           D  + ++  L ++L
Sbjct: 403 DYNIQKESTLHLVL 416


>sp|P0CG51|UBB_RAT Polyubiquitin-B OS=Rattus norvegicus GN=Ubb PE=1 SV=1
          Length = 305

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300


>sp|P0CG49|UBB_MOUSE Polyubiquitin-B OS=Mus musculus GN=Ubb PE=1 SV=1
          Length = 305

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300


>sp|P0CG62|UBB_CHICK Polyubiquitin-B OS=Gallus gallus GN=UBB PE=2 SV=1
          Length = 305

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300


>sp|P0CH28|UBC_BOVIN Polyubiquitin-C OS=Bos taurus GN=UBC PE=1 SV=1
          Length = 690

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 666 DYNIQKESTLHLVLR 680



 Score = 47.4 bits (111), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I++   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKGKIQE---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72


>sp|P0CG66|UBC_GORGO Polyubiquitin-C OS=Gorilla gorilla gorilla GN=UBC PE=3 SV=1
          Length = 609

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604


>sp|P0CG69|UBIQP_DROME Polyubiquitin OS=Drosophila melanogaster GN=Ubi-p63E PE=3 SV=1
          Length = 763

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 666 DYNIQKESTLHLVLR 680



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 741

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 742 DYNIQKESTLHLVLR 756


>sp|P0CG48|UBC_HUMAN Polyubiquitin-C OS=Homo sapiens GN=UBC PE=1 SV=3
          Length = 685

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 666 DYNIQKESTLHLVLR 680


>sp|P0CG53|UBB_BOVIN Polyubiquitin-B OS=Bos taurus GN=UBB PE=1 SV=1
          Length = 305

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300


>sp|P0CG50|UBC_MOUSE Polyubiquitin-C OS=Mus musculus GN=Ubc PE=1 SV=2
          Length = 734

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 666 DYNIQKESTLHLVLR 680


>sp|P0CG61|UBC_PONPY Polyubiquitin-C OS=Pongo pygmaeus GN=UBC PE=3 SV=1
          Length = 761

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1  MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
          M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 57

Query: 61 DNKVSEDGFLVVMLS 75
          D  + ++  L ++L 
Sbjct: 58 DYNIQKESTLHLVLR 72



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 133

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 134 DYNIQKESTLHLVLR 148



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 209

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 210 DYNIQKESTLHLVLR 224



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 285

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 286 DYNIQKESTLHLVLR 300



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 361

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 362 DYNIQKESTLHLVLR 376



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 437

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 438 DYNIQKESTLHLVLR 452



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 513

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 514 DYNIQKESTLHLVLR 528



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 589

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 590 DYNIQKESTLHLVLR 604



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 665

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 666 DYNIQKESTLHLVLR 680



 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 1   MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
           M++ VKTL G    + V+PSDT+  VK  I+D   K+  P  QQ LI  GK L+D  TL+
Sbjct: 685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 741

Query: 61  DNKVSEDGFLVVMLS 75
           D  + ++  L ++L 
Sbjct: 742 DYNIQKESTLHLVLR 756


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.126    0.356 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,224,243
Number of Sequences: 539616
Number of extensions: 5897767
Number of successful extensions: 49952
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 743
Number of HSP's that attempted gapping in prelim test: 40701
Number of HSP's gapped (non-prelim): 7800
length of query: 335
length of database: 191,569,459
effective HSP length: 118
effective length of query: 217
effective length of database: 127,894,771
effective search space: 27753165307
effective search space used: 27753165307
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)