BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019818
(335 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y673|ALG5_HUMAN Dolichyl-phosphate beta-glucosyltransferase OS=Homo sapiens GN=ALG5
PE=1 SV=1
Length = 324
Score = 261 bits (667), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 191/298 (64%), Gaps = 19/298 (6%)
Query: 37 HAHIEAPAIFEDPSSLKQVPCPSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRA 96
H H E F + K+ PS+ D K +S+++P++NEE RLP +DE L+YL++R
Sbjct: 38 HRH-EEEKFFLNAKGQKET-LPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEKRQ 95
Query: 97 AKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR 156
+D +FTYEV+++DDGS D T +VAF + +KY D VR+I L +N GKG AIR G+ SR
Sbjct: 96 KRDPAFTYEVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNRGKGGAIRMGIFSSR 155
Query: 157 GELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAH 216
GE +LM DADGATK D+EKLE ++ D + + IA GSRAH
Sbjct: 156 GEKILMADADGATKFPDVEKLEKGLN---------------DLQPWPNQMAIAC-GSRAH 199
Query: 217 LEEKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWC 276
LE++++A R ++R LM GFH +V GIRDTQCGFK+FTR AA + F+++ ++RW
Sbjct: 200 LEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSSLHVERWA 259
Query: 277 FDVELVYLCKRFGIPIIEISVNWSEIPGSKVNPL-SIPNMLWELALMSVGYRTGMWKV 333
FDVEL+Y+ + F IPI EI+VNW+EI GSK+ P S M +L + + Y TG W++
Sbjct: 260 FDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRL 317
>sp|Q9DB25|ALG5_MOUSE Dolichyl-phosphate beta-glucosyltransferase OS=Mus musculus GN=Alg5
PE=2 SV=1
Length = 324
Score = 257 bits (656), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/278 (46%), Positives = 180/278 (64%), Gaps = 17/278 (6%)
Query: 58 PSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT 117
PS+ D K +S+++P++NEE RLP +DE LNYL++R D +FTYEV+++DDGS D T
Sbjct: 57 PSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALNYLEKRQKHDCTFTYEVIVVDDGSEDQT 116
Query: 118 KRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177
+VA + +KY D VR+I L RN GKG A+R G+ SRGE +LM DADGATK D+EKL
Sbjct: 117 SKVALKYCQKYGSDKVRVITLVRNRGKGGAVRMGVFSSRGEKILMADADGATKFPDVEKL 176
Query: 178 ESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNFLMKGFH 237
E + D + IA GSRAHLE++++A R ++R FLM GFH
Sbjct: 177 EKGLS---------------DLQPWPEQMAIAC-GSRAHLEKESIAQRSYFRTFLMYGFH 220
Query: 238 LVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISV 297
+V GIRDTQCGFK+ TR AA + F+++ ++RW FDVEL+Y+ + IPI E++V
Sbjct: 221 FLVWFLCVKGIRDTQCGFKLLTREAAARTFSSLHIERWAFDVELLYIAQCLQIPIAEVAV 280
Query: 298 NWSEIPGSKVNPL-SIPNMLWELALMSVGYRTGMWKVR 334
NW+EI GSK+ P S M +L + + Y TG W+++
Sbjct: 281 NWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLK 318
>sp|Q54J42|ALG5_DICDI Dolichyl-phosphate beta-glucosyltransferase OS=Dictyostelium
discoideum GN=alg5 PE=2 SV=1
Length = 327
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 187/302 (61%), Gaps = 24/302 (7%)
Query: 40 IEAPAIFEDPSSLKQVPCPSVTD---PAEK-YISLIIPAFNEEHRLPGALDETLNYLQQR 95
+E ++ D +Q PS+ + P + Y+S+I+PA+NE+ RLP LD+ + +L ++
Sbjct: 44 LEKENVYIDVKEGEQHQFPSLVENKNPIDNIYLSVIVPAYNEQIRLPSMLDDAIKFLNEK 103
Query: 96 AAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155
+ KD F+YE++IIDDGS D T ++ ++ K N+R++ L +N GKG A+++G+L S
Sbjct: 104 SKKDLKFSYEIIIIDDGSKDSTAKLVTSYIEKQPSSNIRLLKLKQNRGKGGAVKRGILCS 163
Query: 156 RGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRA 215
RG+ LM+DADGAT+ D ++E +H + + +D+ I GSR+
Sbjct: 164 RGKYCLMVDADGATEFKDFNRVEDIMHKIEK-----------------NDLGIVC-GSRS 205
Query: 216 HLEEKAL-ATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKR 274
HL + L A R + RN LM GFH+ V GI+DTQCGFK+FTR AR++F + ++R
Sbjct: 206 HLVDSDLVAKRSFLRNILMYGFHIFVQTLCVKGIKDTQCGFKLFTRETARRIFPTLHIER 265
Query: 275 WCFDVELVYLCKRFGIPIIEISVNWSEIPGSKVNPLSIP-NMLWELALMSVGYRTGMWKV 333
W FDVE++YL ++ IPI E++VNW+EI GSK++P S M ++ + Y G+WK+
Sbjct: 266 WAFDVEILYLAQKLNIPIAEVAVNWTEIDGSKLDPFSSSIQMAKDIVRIRFRYLLGIWKI 325
Query: 334 RT 335
++
Sbjct: 326 KS 327
>sp|P40350|ALG5_YEAST Dolichyl-phosphate beta-glucosyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ALG5 PE=1
SV=1
Length = 334
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 159/277 (57%), Gaps = 22/277 (7%)
Query: 62 DPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVA 121
D E ++S++IP++NE R+ L + +++L+++ +E++I+DDGS+D T +
Sbjct: 69 DDEEIFLSVVIPSYNETGRILLMLTDAISFLKEKYGS----RWEIVIVDDGSTDNTTQYC 124
Query: 122 FDFVR---KYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLE 178
+ K + RII +N GKG A+R+G LH RG+ L DADGA+K +D+EKL
Sbjct: 125 LKICKEQFKLNYEQFRIIKFSQNRGKGGAVRQGFLHIRGKYGLFADADGASKFSDVEKL- 183
Query: 179 SQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHL-EEKALATRKWYRNFLMKGFH 237
I A+ + E + D T P A GSRAH+ +A+ R RN LM GFH
Sbjct: 184 --IDAISKIETSSTDLKTTK--------PAVAIGSRAHMVNTEAVIKRSMIRNCLMYGFH 233
Query: 238 LVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISV 297
+V + I+DTQCGFK+F RAA K+F + + W FDVE++ L R I I EI +
Sbjct: 234 TLVFIFGIRSIKDTQCGFKLFNRAAILKIFPYLHTEGWIFDVEILILAIRKRIQIEEIPI 293
Query: 298 NWSEIPGSKVNPLSIPN--MLWELALMSVGYRTGMWK 332
+W E+ GSK+ L+I + M +L ++ + Y G+++
Sbjct: 294 SWHEVDGSKM-ALAIDSIKMAKDLVIIRMAYLLGIYR 329
>sp|O60061|ALG5_SCHPO Dolichyl-phosphate beta-glucosyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=alg5 PE=3 SV=1
Length = 322
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 174/335 (51%), Gaps = 36/335 (10%)
Query: 13 VVVVIILFGLISAII--FEAYRRRDNHAHI-------EAPAIFEDPSSLKQVPCPSVTDP 63
+VV I+L+ ++ I F Y H+H E +F + K + +
Sbjct: 1 MVVYIVLYTCLAGFILLFLVYYYL-THSHCPRKQLEGEETCVFIENGQKKSLTLEKWSTS 59
Query: 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSF---TYEVLIIDDGSSDGTKRV 120
I++I+PA+NE R+ L ET+++L++ S +E+LI+DD S D T
Sbjct: 60 DNIQITVIVPAYNESKRIGNMLQETVDHLEKYYRSSSSAGQRRWEILIVDDESKDTTVNA 119
Query: 121 AFDFVRKYTV-DNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179
+F K + D++R+ L RN GKG A+ GML++RG+ + DADGA++ +DLE L
Sbjct: 120 VLEFSNKLDLRDHLRVCSLKRNRGKGGAVTWGMLYARGQYAIFADADGASQFSDLELLFK 179
Query: 180 QIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHL-EEKALATRKWYRNFLMKGFHL 238
+ R G V GSRAH+ A+ R + RNFLM FH
Sbjct: 180 NMPPGPR-----GGVVV---------------GSRAHMVNTAAVVKRSFIRNFLMHCFHK 219
Query: 239 VVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISVN 298
++ + I DTQCGFK+F+R A + +F + ++ W FD+E++ L + FG+PIIE+ +
Sbjct: 220 LLQILGIREIGDTQCGFKLFSREAYQSIFPRMHVEGWIFDIEVLTLARFFGLPIIEVPIT 279
Query: 299 WSEIPGSKVNPLSIP-NMLWELALMSVGYRTGMWK 332
W E+ GSK+ L +M +L ++ + Y G+W+
Sbjct: 280 WHEVGGSKMTLLKDSISMAIDLLVIRLNYTFGIWE 314
>sp|D4GUA0|AGLD_HALVD Glycosyltransferase AglD OS=Haloferax volcanii (strain ATCC 29605 /
DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=aglD PE=1 SV=1
Length = 624
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)
Query: 58 PSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT 117
P+ A +S+++PA+NE + + T+ L+ D +EV++ +DG D T
Sbjct: 9 PAAATAAGVEVSVVLPAYNEARTIENTVRVTVETLESFLPAD---AFEVIVAEDGCDDET 65
Query: 118 KRVAF------DFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKV 171
+A D +R Y D+ G+G A+ + +RG+ L+ D D AT
Sbjct: 66 PEIADRLAAEDDRIRHYHSDD--------RLGRGGALERAFEAARGDTLVYFDTDLAT-- 115
Query: 172 TDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNF 231
D+ LE + V EY+ AA GSR + A RK R
Sbjct: 116 -DMRHLEELVERVRSGEYD------------------AATGSRWMPDRVADRPRK--RGV 154
Query: 232 LMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIP 291
+ ++ +V L +RD QCGFK F+R A L ++ W +D E++ +R G
Sbjct: 155 PSRAYNGLVRLFLRSDLRDHQCGFKAFSREAFEALRDDVEDNHWFWDTEMLVRAQRAGFR 214
Query: 292 IIEISVNWSEIPGSKVN 308
+ E V+W +KV+
Sbjct: 215 VAEFPVDWEPKGDTKVD 231
>sp|B5XTK8|ARNC_KLEP3 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Klebsiella pneumoniae (strain 342) GN=arnC PE=3 SV=1
Length = 327
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 60 VTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKR 119
+T P K +S++IP +NE+ LP L T A YE+L+IDDGSSD + R
Sbjct: 2 LTYPPVKKVSVVIPVYNEQDSLPELLRRT-----DTACATLGRQYEILLIDDGSSDDSAR 56
Query: 120 VAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDL----E 175
+ + + +V +LL RN+G+ AI G H G+L++ LDAD ++ E
Sbjct: 57 MLTE-AAEAEGSHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVE 115
Query: 176 KLESQIHAVGRKEYNHGDSV 195
K + VG N DS+
Sbjct: 116 KADEGYDVVGTVRQNRQDSI 135
>sp|A5GFZ5|DPM1_PIG Dolichol-phosphate mannosyltransferase OS=Sus scrofa GN=DPM1 PE=3
SV=1
Length = 259
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 27/242 (11%)
Query: 58 PSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT 117
P P + S+++P +NE LP + +L ++ + YE++IIDDGS DGT
Sbjct: 16 PEGRFPRQDKYSVLLPTYNERENLP-----LIVWLLVKSFSESGINYEIIIIDDGSPDGT 70
Query: 118 KRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177
+ +A V+ Y D + + + G G A GM H+ G ++++DA DL
Sbjct: 71 RDIAEQLVKIYGSDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDA-------DLSHH 123
Query: 178 ESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNFLMKGFH 237
I RK+ G+ V T + + + + R + +G +
Sbjct: 124 PKFIPEFIRKQ-KEGNFDIVSGTRYKGNGGVYGWDLK--------------RKIISRGAN 168
Query: 238 LVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISV 297
+ + PG D F+++ + +KL K + F +E++ ++ I E+ +
Sbjct: 169 FITQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPI 228
Query: 298 NW 299
++
Sbjct: 229 SF 230
>sp|A6TF99|ARNC_KLEP7 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC
700721 / MGH 78578) GN=arnC PE=3 SV=1
Length = 327
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 60 VTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKR 119
+T P K +S++IP +NE+ LP L T A YE+L+IDDGSSD + R
Sbjct: 2 LTYPPVKKVSVVIPVYNEQDSLPELLRRT-----DAACATLGRQYEILLIDDGSSDDSAR 56
Query: 120 VAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179
+ + + +V +LL RN+G+ AI G H G+L++ LDAD ++ +L +
Sbjct: 57 MLTE-AAEAEGSHVVAVLLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVA 115
Query: 180 Q----IHAVGRKEYNHGDSV 195
+ VG N DS+
Sbjct: 116 KADEGYDVVGTVRQNRQDSI 135
>sp|Q58619|Y1222_METJA Uncharacterized protein MJ1222 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1222 PE=4 SV=1
Length = 243
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 49/265 (18%)
Query: 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK 127
I +++PAFNEE + ETL L++ K+ ++++DDGS D T +A +K
Sbjct: 19 IFVVVPAFNEEK----MIGETLKNLKKEGYKN------IVVVDDGSMDKTSEIA----KK 64
Query: 128 YTVDNVRIILLGRNHGKGEAIRKGM---LHSRGELLLMLDADGATKVTDLEKLESQIHAV 184
V R IL N G G A+ G+ L + ++++ DADG D+EK+ +
Sbjct: 65 EGVIVCRHIL---NRGLGGALGTGIKCALLYKPKIIITFDADGQHHPKDVEKVVKPV--- 118
Query: 185 GRKEYNHGDSVTVDSTFRISDIPIAAFGSRA--HLEEKALATRKWYRNFLMKGFHLVVIL 242
F D+ A GSR E K + K NF G + + L
Sbjct: 119 ---------------LFEGYDM---AIGSRMMDKNELKNMPLVKRIGNF---GLNFITYL 157
Query: 243 TAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISVN--WS 300
G + D+Q G + F+ AA+K+ +++ R+ E + L K+ G+ + E+ + ++
Sbjct: 158 MGGYFVTDSQSGLRAFSYEAAKKIIGDLKSDRYEVSSEFIILAKKHGLKLKEVPIKTIYT 217
Query: 301 EIPGSK-VNPLSIPNMLWELALMSV 324
E S+ N ++ +L++L + +
Sbjct: 218 EYSMSRGTNVITGFKILFKLIMQKI 242
>sp|B4ETL6|ARNC_PROMH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Proteus mirabilis (strain HI4320) GN=arnC PE=3 SV=1
Length = 326
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK 127
+S++IP +NEE LP L+ T+ ++ K YE++++DDGSSD + ++ +
Sbjct: 10 VSVVIPVYNEEESLPQLLERTI-----KSCKQLEQEYELILVDDGSSDNSAKM-LEEAAN 63
Query: 128 YTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL----ESQIHA 183
++V I+L RN+G+ AI G + G+L++ LDAD ++ +L E
Sbjct: 64 IEDNHVIAIILNRNYGQHSAIMAGFNQADGDLVITLDADLQNPPEEIPRLVATAEEGYDV 123
Query: 184 VGRKEYNHGDS 194
VG + N DS
Sbjct: 124 VGTRRRNRQDS 134
>sp|B7N5L9|ARNC_ECOLU Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T +A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TKACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B7NNT3|ARNC_ECO7I Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T +A + YE+L+IDDGSSD + + D
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TKACESLGKEYEILLIDDGSSDNSAHMLVD-A 61
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
+ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 62 SQAEGSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGY 121
Query: 182 HAVGRKEYNHGDS 194
VG N DS
Sbjct: 122 DVVGTVRQNRQDS 134
>sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase OS=Homo sapiens GN=DPM1 PE=1
SV=1
Length = 260
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 31/242 (12%)
Query: 60 VTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKR 119
V P + S+++P +NE LP + +L ++ + YE++IIDDGS DGT+
Sbjct: 19 VRSPRQNKYSVLLPTYNERENLP-----LIVWLLVKSFSESGINYEIIIIDDGSPDGTRD 73
Query: 120 VAFDFVRKYTVDNVRIILLGRNH--GKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177
VA + Y D RI+L R G G A GM H+ G ++++DA DL
Sbjct: 74 VAEQLEKIYGSD--RILLRPREKKLGLGTAYIHGMKHATGNYIIIMDA-------DLSHH 124
Query: 178 ESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNFLMKGFH 237
I RK+ G+ V T + + + + R + +G +
Sbjct: 125 PKFIPEFIRKQ-KEGNFDIVSGTRYKGNGGVYGWDLK--------------RKIISRGAN 169
Query: 238 LVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISV 297
+ + PG D F+++ + KL K + F +E++ ++ I E+ +
Sbjct: 170 FLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPI 229
Query: 298 NW 299
++
Sbjct: 230 SF 231
>sp|B5YX45|ARNC_ECO5E Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + + V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNSAHI---LV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q8XDZ5|ARNC_ECO57 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O157:H7 GN=arnC PE=3 SV=1
Length = 322
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + + V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNSAHI---LV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|O14466|DPM1_SCHPO Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dpm1 PE=2 SV=1
Length = 236
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 69 SLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKY 128
S+++P +NE LP + YL + + +E++IIDD S DGT+ VA + + Y
Sbjct: 5 SVLLPTYNERKNLP-----IITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIY 59
Query: 129 TVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKE 188
D + + G G A G+ + G+ ++++DAD + L + +KE
Sbjct: 60 GEDKILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDADFSHHPKYLPEFIKL-----QKE 114
Query: 189 YNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNFLMKGFHLVVILTAGPGI 248
+N+ DI G+R + ++ + R F+ +G +L+ G G+
Sbjct: 115 HNY-------------DI---VLGTR-YAKDGGVYGWNLKRKFISRGANLLASTVLGTGV 157
Query: 249 RDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISVNW 299
D F+++ + L + + K + F +E++ + I E+ + +
Sbjct: 158 SDVTGSFRLYKKPVLETLMSEVTSKGYVFQMEIIARAREHNYTIGEVPIAF 208
>sp|Q0T2M9|ARNC_SHIF8 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella flexneri serotype 5b (strain 8401) GN=arnC
PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q3YZV2|ARNC_SHISS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella sonnei (strain Ss046) GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q32DT4|ARNC_SHIDS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=arnC PE=3 SV=2
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q31YK3|ARNC_SHIBS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella boydii serotype 4 (strain Sb227) GN=arnC
PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B6I7J7|ARNC_ECOSE Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain SE11) GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|P77757|ARNC_ECOLI Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12) GN=arnC PE=1 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B1IXT3|ARNC_ECOLC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|A8A2C1|ARNC_ECOHS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O9:H4 (strain HS) GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B1X8W7|ARNC_ECODH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12 / DH10B) GN=arnC PE=3
SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|C4ZU96|ARNC_ECOBW Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B7LAR9|ARNC_ECO55 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain 55989 / EAEC) GN=arnC PE=3
SV=1
Length = 322
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|B1JJ29|ARNC_YERPY Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pseudotuberculosis serotype O:3 (strain
YPIII) GN=arnC PE=3 SV=1
Length = 327
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q93PD9|ARNC_YERPS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=arnC PE=2 SV=1
Length = 327
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|A4TIM3|ARNC_YERPP Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis (strain Pestoides F) GN=arnC PE=3
SV=1
Length = 327
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|B2K5L4|ARNC_YERPB Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pseudotuberculosis serotype IB (strain
PB1/+) GN=arnC PE=3 SV=1
Length = 327
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD ++ +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|B7M5T6|ARNC_ECO8A Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O8 (strain IAI1) GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|A7ZP72|ARNC_ECO24 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|Q57M56|ARNC_SALCH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella choleraesuis (strain SC-B67) GN=arnC PE=3
SV=1
Length = 327
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + S +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLSKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPI 208
VG N DS+ S +I ++ I
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLI 148
>sp|C3KAD3|ARNC_PSEFS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Pseudomonas fluorescens (strain SBW25) GN=arnC PE=3
SV=1
Length = 341
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK 127
+S++IP +NE+ LP L T A K ++ YE++++DDGS D + ++ D +
Sbjct: 9 VSIVIPVYNEQESLPELLRRT-----TAACKQLAYEYEIILVDDGSRDNSAQLLEDAAAE 63
Query: 128 YTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ 180
NV ++L RN+G+ AI G RG++++ LDAD ++ +L Q
Sbjct: 64 -DGSNVVAVILNRNYGQHAAIMAGFEQCRGDVVITLDADLQNPPEEIPRLVEQ 115
>sp|Q9WU83|DPM1_CRIGR Dolichol-phosphate mannosyltransferase OS=Cricetulus griseus
GN=DPM1 PE=2 SV=1
Length = 266
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDF 124
+KY S+++P +NE LP + +L ++ + S YE++IIDDGS DGT+ VA
Sbjct: 31 DKY-SVLLPTYNERENLP-----LIVWLLVKSFSESSINYEIIIIDDGSPDGTREVAEQL 84
Query: 125 VRKYTVDNVRIILLGRNH--GKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIH 182
+ Y D RI+L R G G A G+ H+ G ++++DA DL I
Sbjct: 85 EKIYGPD--RILLRPREKKLGLGTAYIHGIKHATGNYVIIMDA-------DLSHHPKFIP 135
Query: 183 AVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNFLMKGFHLVVIL 242
RK+ G+ V T + + + + R + +G + + +
Sbjct: 136 EFIRKQ-KEGNFDIVSGTRYKGNGGVYGWDLK--------------RKIISRGANFITQI 180
Query: 243 TAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEISVNW 299
PG D F+++ + +KL K + F +E++ ++ I E+ +++
Sbjct: 181 LLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISF 237
>sp|B1LLK8|ARNC_ECOSM Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T +A + YE+L+IDDGSSD + + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRT-----TKACESLGKEYEILLIDDGSSDNSAHMLVE-A 61
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
+ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 62 SQAEGSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGY 121
Query: 182 HAVGRKEYNHGDS 194
VG N DS
Sbjct: 122 DVVGTVRQNRQDS 134
>sp|Q7UC63|ARNC_SHIFL Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella flexneri GN=arnC PE=3 SV=2
Length = 322
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + YE+L+IDDGSSD + A V
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKEYEILLIDDGSSDNS---AHMLV 59
Query: 126 RKYTVDNVRI--ILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ--- 180
+N I IL+ RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 60 EASQAENSHIVSILINRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE 119
Query: 181 -IHAVGRKEYNHGDS 194
VG N DS
Sbjct: 120 GYDVVGTVRQNRQDS 134
>sp|O70152|DPM1_MOUSE Dolichol-phosphate mannosyltransferase OS=Mus musculus GN=Dpm1 PE=2
SV=1
Length = 260
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 56 PCPSVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSD 115
P + +KY S+++P +NE LP + +L ++ + + YE++IIDDGS D
Sbjct: 16 PPQGRSSRQDKY-SVLLPTYNERENLP-----LIVWLLVKSFSESAINYEIIIIDDGSPD 69
Query: 116 GTKRVAFDFVRKYTVDNVRIILLGRNH--GKGEAIRKGMLHSRGELLLMLDADGATKVTD 173
GT+ VA Y D RI+L R G G A G+ H+ G ++++DA D
Sbjct: 70 GTREVAEQLAEIYGPD--RILLRPREKKLGLGTAYIHGIKHATGNYVIIMDA-------D 120
Query: 174 LEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKW--YRNF 231
L I RK+ + + ++ + +G W R
Sbjct: 121 LSHHPKFIPEFIRKQKEGNFDIVSGTRYKGNG---GVYG--------------WDLKRKI 163
Query: 232 LMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIP 291
+ +G + + + PG D F+++ + +KL K + F +E++ ++
Sbjct: 164 ISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCVSKGYVFQMEMIVRARQMNYT 223
Query: 292 IIEISVNW 299
I E+ +++
Sbjct: 224 IGEVPISF 231
>sp|A8GDR6|ARNC_SERP5 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Serratia proteamaculans (strain 568) GN=arnC PE=3
SV=1
Length = 326
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP L+ T A K + YE++++DDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPALLERT-----TAACKQLTQPYEIILVDDGSSDNSADM-LTAA 61
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL----ESQI 181
+ V +LL RN+G+ AI G G+L++ LDAD ++ +L E
Sbjct: 62 AEQPGSCVIAVLLNRNYGQHSAIMAGFNQVSGDLVITLDADLQNPPEEIPRLVKVAEEGY 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPI 208
VG N DS S RI ++ I
Sbjct: 122 DVVGTVRANRQDSWFRKSASRIINMMI 148
>sp|Q1CIH6|ARNC_YERPN Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=arnC
PE=3 SV=1
Length = 327
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|A9R094|ARNC_YERPG Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis bv. Antiqua (strain Angola) GN=arnC
PE=3 SV=1
Length = 327
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q8ZDX7|ARNC_YERPE Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis GN=arnC PE=3 SV=1
Length = 327
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|Q1C741|ARNC_YERPA Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=arnC
PE=3 SV=1
Length = 327
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 59 SVTDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK 118
S+ +P +K +S++IP +NE+ LP +D T A K + YE++++DDGSSD +
Sbjct: 2 SLNEPIKK-VSIVIPVYNEQESLPALIDRT-----TAACKLLTQAYEIILVDDGSSDNST 55
Query: 119 RVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL- 177
+ ++ ILL RN+G+ AI G G+L++ LDAD + +L
Sbjct: 56 EL-LTAAANDPDSHIIAILLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEETPRLV 114
Query: 178 ---ESQIHAVGRKEYNHGDSVTVDSTFRISDIPI 208
E VG N DS+ + R+ ++ I
Sbjct: 115 HVAEEGYDVVGTVRANRQDSLFRKTASRMINMMI 148
>sp|D4GYG7|AGLE_HALVD Glycosyltransferase AglE OS=Haloferax volcanii (strain ATCC 29605 /
DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=aglE PE=1 SV=1
Length = 304
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVR 126
++S+IIP +NE + L+ + Q K K YEVL++D+GS DGTK +A F
Sbjct: 7 FVSVIIPVYNEAENIQKCLNAVTS---QTYPKSK---YEVLVVDNGSQDGTKEIARQFST 60
Query: 127 KYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVG 185
Y DN+ I++ G A G+ S G +L LD D + LE+ S I G
Sbjct: 61 AY--DNLEILIEDEQQGSYAARNTGIEQSSGAILAFLDGDCSPHQQWLERGVSTISGTG 117
>sp|C0Q070|ARNC_SALPC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi C (strain RKS4594) GN=arnC PE=3
SV=1
Length = 327
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPI 208
VG N DS+ S +I ++ I
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLI 148
>sp|A0KGY7|ARNC_AERHH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC
7966 / NCIB 9240) GN=arnC PE=3 SV=1
Length = 326
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDK-SFTYEVLIIDDGSSDGTKRVAFDF 124
K +S++IP +NEE LP L AA D+ S YEV++IDDGS DG+ + D
Sbjct: 7 KLVSVVIPVYNEEASLPALLSRV------TAACDQLSQNYEVILIDDGSHDGSTELIRDA 60
Query: 125 VRKYTVDNVRII--LLGRNHGKGEAIRKGMLHSRGELLLMLDAD 166
V+ +++ LL RN+G+ AI G ++G+L++ LDAD
Sbjct: 61 A---AVEGSKLVGVLLNRNYGQHAAIMAGFETAKGDLVITLDAD 101
>sp|O52324|ARNC_SALTY Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=arnC PE=2 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPI 208
VG N DS+ S +I ++ I
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLI 148
>sp|B4TPI1|ARNC_SALSV Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella schwarzengrund (strain CVM19633) GN=arnC
PE=3 SV=1
Length = 327
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV 125
K +S++IP +NE+ LP + T A + +E+L+IDDGSSD + +
Sbjct: 8 KKVSVVIPVYNEQESLPELIRRTTT-----ACESLGKAWEILLIDDGSSDSSAELMVKAS 62
Query: 126 RKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ----I 181
++ ++ ILL RN+G+ AI G H G+L++ LDAD ++ +L ++
Sbjct: 63 QEAD-SHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEGF 121
Query: 182 HAVGRKEYNHGDSVTVDSTFRISDIPI 208
VG N DS+ S +I ++ I
Sbjct: 122 DVVGTVRQNRQDSLFRKSASKIINLLI 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,885,602
Number of Sequences: 539616
Number of extensions: 5235671
Number of successful extensions: 16048
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 15659
Number of HSP's gapped (non-prelim): 239
length of query: 335
length of database: 191,569,459
effective HSP length: 118
effective length of query: 217
effective length of database: 127,894,771
effective search space: 27753165307
effective search space used: 27753165307
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)