Query 019818
Match_columns 335
No_of_seqs 201 out of 2882
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 07:33:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019818.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019818hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f1y_A Mannosyl-3-phosphoglyce 100.0 3.8E-29 1.3E-33 233.8 15.2 213 65-305 93-311 (387)
2 3bcv_A Putative glycosyltransf 100.0 6.2E-28 2.1E-32 211.2 20.2 200 65-296 4-218 (240)
3 3ckj_A Putative uncharacterize 99.9 1.1E-26 3.6E-31 213.7 18.9 213 64-308 46-269 (329)
4 1qg8_A Protein (spore coat pol 99.9 4.7E-27 1.6E-31 207.6 15.1 190 66-296 1-207 (255)
5 4hg6_A Cellulose synthase subu 99.9 4.7E-26 1.6E-30 231.8 22.7 234 62-325 136-393 (802)
6 1xhb_A Polypeptide N-acetylgal 99.9 5.7E-26 2E-30 218.7 17.6 215 63-296 26-251 (472)
7 2d7i_A Polypeptide N-acetylgal 99.9 3.5E-26 1.2E-30 224.8 10.3 215 63-297 109-332 (570)
8 2ffu_A Ppgalnact-2, polypeptid 99.9 5E-25 1.7E-29 213.7 15.1 211 63-296 63-283 (501)
9 2bo4_A Mannosylglycerate synth 99.9 3.4E-24 1.2E-28 200.1 17.3 195 69-298 2-212 (397)
10 2z86_A Chondroitin synthase; G 99.9 5.7E-24 1.9E-28 211.6 19.8 192 64-296 373-565 (625)
11 4fix_A UDP-galactofuranosyl tr 99.9 3E-24 1E-28 213.3 14.6 257 63-327 177-445 (657)
12 2z86_A Chondroitin synthase; G 99.9 1.3E-22 4.5E-27 201.8 16.3 202 64-296 91-323 (625)
13 3l7i_A Teichoic acid biosynthe 99.9 1.2E-24 4E-29 220.0 0.0 196 66-296 2-199 (729)
14 2zu9_A Mannosyl-3-phosphoglyce 99.8 3.2E-17 1.1E-21 150.8 21.5 224 67-325 52-333 (394)
15 2nxv_A ATP synthase subunits r 99.8 2.5E-18 8.5E-23 151.6 11.4 88 64-183 14-101 (249)
16 2wvl_A Mannosyl-3-phosphoglyce 99.7 4.4E-16 1.5E-20 139.4 16.7 170 65-266 52-262 (391)
17 2fy7_A Beta-1,4-galactosyltran 99.7 3.7E-16 1.3E-20 140.1 13.1 152 64-295 63-220 (287)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.9 2.6E-09 8.9E-14 97.4 8.0 103 67-182 3-125 (343)
19 2c0n_A A197; thermophil protei 98.0 1.8E-06 6E-11 71.0 1.2 109 153-296 50-169 (203)
20 3lw6_A FI08434P, beta-4-galact 97.8 0.00048 1.6E-08 60.0 13.5 156 61-296 46-205 (287)
21 1v84_A Galactosylgalactosylxyl 94.7 0.2 6.8E-06 42.9 9.7 98 65-176 2-126 (253)
22 3cu0_A Galactosylgalactosylxyl 94.3 0.29 9.8E-06 42.4 9.7 100 63-176 18-152 (281)
23 1qwj_A Cytidine monophospho-N- 93.7 0.79 2.7E-05 38.5 11.6 72 104-184 45-123 (229)
24 1omz_A Alpha-1,4-N-acetylhexos 92.7 0.089 3.1E-06 46.3 4.1 109 66-187 28-137 (293)
25 3k8d_A 3-deoxy-manno-octuloson 92.7 0.98 3.3E-05 39.1 10.8 103 66-184 17-135 (264)
26 3oam_A 3-deoxy-manno-octuloson 92.4 1.8 6.3E-05 36.9 12.1 72 103-184 42-119 (252)
27 2d0j_A Galactosylgalactosylxyl 92.2 0.77 2.6E-05 39.1 9.0 99 65-177 2-121 (246)
28 3tqd_A 3-deoxy-manno-octuloson 92.1 1.8 6.2E-05 37.2 11.7 72 103-184 49-126 (256)
29 1h7e_A 3-deoxy-manno-octuloson 91.4 2.7 9.3E-05 35.3 12.0 90 76-184 25-117 (245)
30 2wee_A MOBA-related protein; u 90.8 0.28 9.7E-06 39.9 5.0 88 76-180 29-120 (197)
31 2waw_A MOBA relate protein; un 90.5 0.79 2.7E-05 37.2 7.5 70 104-180 47-120 (199)
32 3st8_A Bifunctional protein GL 89.9 2.6 8.9E-05 39.9 11.5 102 71-184 34-139 (501)
33 1ezi_A CMP-N-acetylneuraminic 89.5 2.2 7.5E-05 35.5 9.6 88 78-183 29-124 (228)
34 4fcu_A 3-deoxy-manno-octuloson 89.4 5.7 0.00019 33.9 12.3 73 103-184 42-119 (253)
35 3ngw_A Molybdopterin-guanine d 88.7 1.8 6.3E-05 35.8 8.4 85 76-183 24-110 (208)
36 1vgw_A 4-diphosphocytidyl-2C-m 88.3 1.7 5.7E-05 36.2 8.1 92 76-183 32-131 (231)
37 4fce_A Bifunctional protein GL 87.4 1.5 5.3E-05 40.7 8.0 90 77-183 35-126 (459)
38 2y6p_A 3-deoxy-manno-octuloson 87.0 5.8 0.0002 32.9 10.7 86 77-184 26-114 (234)
39 3juk_A UDP-glucose pyrophospho 86.8 0.94 3.2E-05 39.3 5.7 53 132-184 96-152 (281)
40 2qh5_A PMI, ALGA, mannose-6-ph 86.3 4.9 0.00017 35.3 10.3 96 71-180 30-128 (308)
41 2yc3_A 2-C-methyl-D-erythritol 86.2 5.4 0.00018 33.0 10.0 93 77-184 31-126 (228)
42 1e5k_A Molybdopterin-guanine d 86.1 1.8 6.1E-05 35.5 6.8 83 76-180 31-116 (201)
43 4ecm_A Glucose-1-phosphate thy 85.8 3 0.0001 35.8 8.4 78 103-184 70-149 (269)
44 3pnn_A Conserved domain protei 85.5 2.1 7.1E-05 37.7 7.4 99 71-183 25-141 (303)
45 3f1c_A Putative 2-C-methyl-D-e 85.4 11 0.00036 31.8 11.6 95 76-184 30-133 (246)
46 1vic_A 3-deoxy-manno-octuloson 84.0 9.4 0.00032 32.4 10.7 89 76-184 25-119 (262)
47 3q80_A 2-C-methyl-D-erythritol 84.0 8.8 0.0003 32.2 10.3 90 76-183 33-127 (231)
48 3d5n_A Q97W15_sulso; NESG, SSR 83.8 0.73 2.5E-05 37.8 3.3 49 132-181 61-112 (197)
49 2ux8_A Glucose-1-phosphate uri 83.1 2.4 8.4E-05 37.0 6.7 53 132-184 107-161 (297)
50 2xwl_A 2-C-methyl-D-erythritol 82.8 11 0.00037 30.8 10.4 88 77-181 29-118 (223)
51 2vsh_A TARI, 2-C-methyl-D-eryt 82.7 5.1 0.00017 33.2 8.4 95 76-184 29-134 (236)
52 2j0a_A Beta-1,3-N-acetylglucos 82.7 1.1 3.6E-05 39.3 4.0 112 155-299 92-213 (280)
53 2v0h_A Bifunctional protein GL 82.5 3.5 0.00012 38.2 7.9 89 78-183 33-123 (456)
54 3rsb_A Adenosylcobinamide-phos 81.7 0.79 2.7E-05 37.3 2.7 93 76-183 25-119 (196)
55 2e8b_A Probable molybdopterin- 80.8 8.8 0.0003 31.1 9.0 64 103-178 54-120 (201)
56 1fxo_A Glucose-1-phosphate thy 80.0 5.7 0.00019 34.7 7.9 98 71-183 27-127 (293)
57 1hm9_A GLMU, UDP-N-acetylgluco 79.9 3.3 0.00011 38.6 6.8 94 72-184 34-130 (468)
58 1i52_A 4-diphosphocytidyl-2-C- 78.0 1.8 6E-05 36.3 3.8 74 103-183 51-126 (236)
59 2e3d_A UTP--glucose-1-phosphat 77.2 9.8 0.00034 33.0 8.6 53 132-184 103-162 (302)
60 2dpw_A Hypothetical protein TT 76.8 5.9 0.0002 33.0 6.8 77 76-179 30-107 (232)
61 1lvw_A Glucose-1-phosphate thy 76.0 6.6 0.00023 34.3 7.1 97 71-183 28-128 (295)
62 1vpa_A 2-C-methyl-D-erythritol 74.1 18 0.00062 29.7 9.2 93 76-184 39-135 (234)
63 2pa4_A UTP-glucose-1-phosphate 72.9 8.6 0.0003 33.9 7.2 53 132-184 106-161 (323)
64 3tzt_A Glycosyl transferase fa 72.0 11 0.00039 32.4 7.5 105 66-179 4-122 (276)
65 1mc3_A Glucose-1-phosphate thy 68.1 5.6 0.00019 34.8 4.7 97 71-183 28-128 (296)
66 1w55_A ISPD/ISPF bifunctional 67.8 3.1 0.00011 37.9 3.0 87 76-183 29-116 (371)
67 2x65_A Mannose-1-phosphate gua 66.0 17 0.00057 32.3 7.5 96 71-180 27-124 (336)
68 2gak_A Beta-1,6-N-acetylglucos 64.3 71 0.0024 28.9 11.5 109 66-187 84-202 (391)
69 3cgx_A Putative nucleotide-dip 59.9 51 0.0018 27.6 9.2 50 133-183 77-130 (242)
70 1yp2_A Glucose-1-phosphate ade 59.8 49 0.0017 30.3 9.8 99 72-184 46-162 (451)
71 3brk_X Glucose-1-phosphate ade 59.1 20 0.00069 32.7 7.0 99 72-184 38-152 (420)
72 2xme_A CTP-inositol-1-phosphat 58.5 12 0.0004 31.0 4.8 70 104-179 60-130 (232)
73 1tzf_A Glucose-1-phosphate cyt 57.6 60 0.0021 26.9 9.3 45 139-184 103-148 (259)
74 3kcq_A Phosphoribosylglycinami 45.5 77 0.0026 26.1 7.7 93 66-176 9-102 (215)
75 4evw_A Nucleoside-diphosphate- 44.5 22 0.00076 30.0 4.4 95 71-176 24-125 (255)
76 1g9r_A Glycosyl transferase; a 42.9 37 0.0013 29.6 5.7 78 100-179 27-117 (311)
77 2px7_A 2-C-methyl-D-erythritol 42.8 35 0.0012 28.2 5.3 51 132-184 83-134 (236)
78 2i5e_A Hypothetical protein MM 40.6 61 0.0021 26.1 6.4 45 132-179 66-111 (211)
79 1jyk_A LICC protein, CTP:phosp 39.5 32 0.0011 28.9 4.6 65 104-177 72-138 (254)
80 4fak_A Ribosomal RNA large sub 27.9 2.2E+02 0.0074 22.3 11.6 95 65-184 4-102 (163)
81 3mvn_A UDP-N-acetylmuramate:L- 27.4 1.6E+02 0.0056 22.5 6.6 59 108-166 39-102 (163)
82 4ds3_A Phosphoribosylglycinami 25.8 1.9E+02 0.0064 23.6 6.9 70 100-176 31-106 (209)
83 3u2u_A Glycogenin-1, GN-1, GN1 24.0 96 0.0033 26.4 4.9 17 156-172 95-111 (263)
84 1ll2_A Glycogenin-1; protein-s 23.9 2E+02 0.0067 25.3 7.1 18 155-172 93-110 (333)
85 2ggo_A 401AA long hypothetical 23.1 47 0.0016 29.8 3.0 87 71-179 25-113 (401)
86 3rht_A (gatase1)-like protein; 21.0 2.6E+02 0.0089 23.6 7.0 73 104-183 5-78 (259)
87 1to0_A Hypothetical UPF0247 pr 20.6 3.1E+02 0.011 21.5 9.2 27 157-183 70-97 (167)
No 1
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.96 E-value=3.8e-29 Score=233.78 Aligned_cols=213 Identities=17% Similarity=0.176 Sum_probs=154.8
Q ss_pred CceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCh
Q 019818 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (335)
Q Consensus 65 ~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk 144 (335)
.|+||||||+|||++.|.++|+++.+++.+ ...++|||||||||+|+|.++++++..+.....++++..+.|.||
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~-----~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~ 167 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNER-----APLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGK 167 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHH-----SCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhc-----CCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCH
Confidence 477999999999999999999999875543 445799999999999999999988744311112223445679999
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCC-CCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHh-h
Q 019818 145 GEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKA-L 222 (335)
Q Consensus 145 ~~aln~g~~~a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~-~ 222 (335)
+.|+|.|++.|+||+|+++|+|+. ++|++|.++++.+.++++. ++|.|++......+ .
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~--------------------d~v~G~~~~~~~~~~~ 227 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGV--------------------RFVKAAYRRPFRKGES 227 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTC--------------------CEEEEEEECC------
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCc--------------------eEEEEeeccccccccc
Confidence 999999999999999999999999 8999999999999875433 78888764321110 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhC--CCCccCCCceeeeeHHHHHHhhhhhhhccccchHHHHHHhH-HcCCC-EEEeeeE
Q 019818 223 ATRKWYRNFLMKGFHLVVILTAG--PGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCK-RFGIP-IIEISVN 298 (335)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~r~~l~~i~~~~~~~~~~~D~el~~r~~-~~G~~-i~~~p~~ 298 (335)
..............+.+.+.... ..+.++.||+++|+|++++++ .. ..+|++|.+++.++. +.|++ |.++|+.
T Consensus 228 ~~~~~~g~v~~~~~~~l~~~~~~~l~~~~d~~sG~~a~rR~~l~~i--~f-~~gyg~e~ell~~~~~~~G~~~I~eVpi~ 304 (387)
T 3f1y_A 228 IEEDGGGRVTELTAKPLFNLFYPELAGFVQPLAGEFVADRELFCSI--PF-LTGYAVETGIMIDVLKKVGLGAMAQVDLG 304 (387)
T ss_dssp -CCBCCSHHHHHTHHHHHHHHCGGGTTCSCTTCSCEEEEHHHHTTS--CE-ECSTTHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred cccccCCchhhhhHHHHHHHHhHhhccccccccccEEEEHHHHHhC--CC-CCCcchHHHHHHHHHHhcCCCeEEEEecc
Confidence 00011111111111222222111 257888999999999999998 22 378899999999985 56997 9999998
Q ss_pred EEecCCC
Q 019818 299 WSEIPGS 305 (335)
Q Consensus 299 ~~~~~~s 305 (335)
+++...+
T Consensus 305 ~~~h~~~ 311 (387)
T 3f1y_A 305 ERQNRHQ 311 (387)
T ss_dssp ECCCCCC
T ss_pred eeecCCC
Confidence 8765443
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.96 E-value=6.2e-28 Score=211.19 Aligned_cols=200 Identities=17% Similarity=0.199 Sum_probs=141.3
Q ss_pred CceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCh
Q 019818 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (335)
Q Consensus 65 ~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk 144 (335)
.|+||||||+||+++.|.+||+|+++ |.+.++|||||||||+|+|.++++++.++++ ++++++ .+|.|+
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~--------q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i~-~~n~G~ 72 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLA--------QTLSDIEIILIDDESPDNCPKICDDYAAQYP--NIKVIH-KKNAGL 72 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHT--------CSSSSEEEEEEECCCSSSHHHHHHHHHHHCS--SEEEEE-CCCCCH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHh--------CcCCCeEEEEEECCCCcCHHHHHHHHHhhCC--CEEEEE-CCCCCh
Confidence 46799999999999999999999987 5777999999999999999999999999988 899997 469999
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHh---
Q 019818 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKA--- 221 (335)
Q Consensus 145 ~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~--- 221 (335)
+.|+|.|++.|+||||+++|+|+.++|++|+++++.+++.. . +++.+.........
T Consensus 73 ~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~-~--------------------~~v~~~~~~~~~~~~~~ 131 (240)
T 3bcv_A 73 GMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYT-C--------------------DAVFTGLKRITMAGIPT 131 (240)
T ss_dssp HHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHT-C--------------------SEEEC------------
T ss_pred HHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcC-C--------------------CEEEEeeEEEccCCccc
Confidence 99999999999999999999999999999999999998742 2 34444322111111
Q ss_pred --hhhhhhhHHHH-HHHHHHHHHHHhCCCC-------ccCCCceeeeeHHHHHHhh-hhhhh-ccccchHHHHHHhHHcC
Q 019818 222 --LATRKWYRNFL-MKGFHLVVILTAGPGI-------RDTQCGFKMFTRAAARKLF-TNIRL-KRWCFDVELVYLCKRFG 289 (335)
Q Consensus 222 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~g~~~~~r~~l~~i~-~~~~~-~~~~~D~el~~r~~~~G 289 (335)
........... ............+... ....+++.+|||++++++. +.... ....+|.+|+.|+..+|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g 211 (240)
T 3bcv_A 132 GTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANS 211 (240)
T ss_dssp --------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTC
T ss_pred cccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhC
Confidence 00000000000 0000001111111100 0123445699999999973 22221 22458999999999999
Q ss_pred CCEEEee
Q 019818 290 IPIIEIS 296 (335)
Q Consensus 290 ~~i~~~p 296 (335)
+++.++|
T Consensus 212 ~~i~~~~ 218 (240)
T 3bcv_A 212 NIVCVLP 218 (240)
T ss_dssp SCEEECC
T ss_pred CEEEEEC
Confidence 9999998
No 3
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.95 E-value=1.1e-26 Score=213.66 Aligned_cols=213 Identities=16% Similarity=0.137 Sum_probs=149.9
Q ss_pred CCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCC-ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEE-cCCC
Q 019818 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSF-TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL-LGRN 141 (335)
Q Consensus 64 ~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~-~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~-~~~~ 141 (335)
..|+||||||+|||++.|.++|++++++ .++ .+|||||||||+|+|.++++++..+... +++++. .++|
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q--------~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~-~~~~~~~~~~n 116 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPL--------VDGLVDELIVLDSGSTDDTEIRAVAAGARVVS-REQALPEVPIR 116 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGG--------BTTTBSEEEEEECSCCSSHHHHHHHTTCEEEE-HHHHCTTSCCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHh--------hCCCCcEEEEEeCCCCchHHHHHHHhhhhhcc-ceeeeccCCCC
Confidence 3578999999999999999999999883 433 5999999999999999999887433110 222232 6789
Q ss_pred CChHHHHHHHHHhcCCCEEEEEeCCCC-CCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhh-
Q 019818 142 HGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEE- 219 (335)
Q Consensus 142 ~Gk~~aln~g~~~a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~- 219 (335)
.|++.|+|.|++.|+||+|+++|+|+. ++|++|.++++.+.++++. ++|.|.+.....
T Consensus 117 ~G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~--------------------~~v~g~~~~~~~~ 176 (329)
T 3ckj_A 117 PGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGV--------------------HLVKSFYRRPLNV 176 (329)
T ss_dssp CSHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSC--------------------CEEEEEEECC---
T ss_pred CCHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCc--------------------cEEEEEecccccC
Confidence 999999999999999999999999999 8999999999997665433 677776543110
Q ss_pred Hhhh---hhhhhHHHHHHHHHHHHHHHhC--CCCccCCCceeeeeHHHHHHhhhhhhhccccchHHHHHHhHH-cCCC-E
Q 019818 220 KALA---TRKWYRNFLMKGFHLVVILTAG--PGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKR-FGIP-I 292 (335)
Q Consensus 220 ~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~r~~l~~i~~~~~~~~~~~D~el~~r~~~-~G~~-i 292 (335)
+... ...................... ....+..||+++|||++++++. . ..+|.+|.|++.++.+ .|++ +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~--f-~~~~~~D~~l~~r~~~~~g~~~i 253 (329)
T 3ckj_A 177 GDAGGGAGATGGGRVTELVARPLLAALRPELGCILQPLGGEYAATRELLTSVP--F-APGYGVEIGLLVDTFDRLGLDAI 253 (329)
T ss_dssp ------------CHHHHHTHHHHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC--B-CCGGGHHHHHHHHHHHHHCGGGE
T ss_pred CcccccccccCCCceehhhHHHHHHHhhhhhccccCCCccceeeeHHHHHhCC--C-CCCCcccHHHHHHHHHhcCCccE
Confidence 0000 0000001111111111111111 2345677888899999999983 2 3567789999999987 7775 9
Q ss_pred EEeeeEEEecCCCccc
Q 019818 293 IEISVNWSEIPGSKVN 308 (335)
Q Consensus 293 ~~~p~~~~~~~~s~~~ 308 (335)
.++|+.|+..+.+..+
T Consensus 254 ~~v~~~~r~h~~s~~~ 269 (329)
T 3ckj_A 254 AQVNLGVREHRNRPLA 269 (329)
T ss_dssp EEEEEEECEECCCCGG
T ss_pred eeecceEEecCCCcHH
Confidence 9999988877666543
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.95 E-value=4.7e-27 Score=207.60 Aligned_cols=190 Identities=15% Similarity=0.159 Sum_probs=142.3
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC------
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG------ 139 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~------ 139 (335)
|+||||||+||+++.|.+||+|+++ |.++++|||||||||+|+|.++++++.+ .+ +++++..+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~--------q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~--~i~~i~~~~~~~~~ 69 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILS--------QTFSDFELFIMDDNSNEETLNVIRPFLN-DN--RVRFYQSDISGVKE 69 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHT--------CSCCCEEEEEEECSCCHHHHHHHGGGGG-ST--TEEEEECCCCSHHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHh--------ccCCceEEEEEECCCCchHHHHHHHHhh-cC--CEEEEecccccccc
Confidence 4699999999999999999999988 5777999999999999999999998865 55 89999998
Q ss_pred --CCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhh
Q 019818 140 --RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHL 217 (335)
Q Consensus 140 --~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~ 217 (335)
+|.|++.|+|.|++.|+||||+++|+|+.++|++|.++++.++++++.+ +|.|.....
T Consensus 70 ~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~--------------------~v~~~~~~~ 129 (255)
T 1qg8_A 70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKA--------------------VIYSASKTY 129 (255)
T ss_dssp HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCC--------------------EEEEEEEEE
T ss_pred cccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCce--------------------EEEeceEEE
Confidence 8999999999999999999999999999999999999999998865543 343332211
Q ss_pred --hhHhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhh-hh------hhhccccchHHHHHHhHHc
Q 019818 218 --EEKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLF-TN------IRLKRWCFDVELVYLCKRF 288 (335)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~-~~------~~~~~~~~D~el~~r~~~~ 288 (335)
............... ...........+++.+++|++++++. +. .....+.+|.+++.|+...
T Consensus 130 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~ 200 (255)
T 1qg8_A 130 HLNENRDIVKETVRPAA---------QVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF 200 (255)
T ss_dssp EEC---CEEEEEEECCC---------SCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT
T ss_pred EeCCCCcchhhccCchH---------HHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh
Confidence 111000000000000 00001222344556799999999985 22 2334456799999999999
Q ss_pred CCCEEEee
Q 019818 289 GIPIIEIS 296 (335)
Q Consensus 289 G~~i~~~p 296 (335)
| ++.++|
T Consensus 201 g-~~~~~~ 207 (255)
T 1qg8_A 201 Y-PFYPLD 207 (255)
T ss_dssp C-CBEEEE
T ss_pred C-CEEEec
Confidence 8 788887
No 5
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.94 E-value=4.7e-26 Score=231.78 Aligned_cols=234 Identities=14% Similarity=0.040 Sum_probs=156.2
Q ss_pred CCCCceEEEEEeccCCCCCh-HHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchH---------------HHHHHHH
Q 019818 62 DPAEKYISLIIPAFNEEHRL-PGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTK---------------RVAFDFV 125 (335)
Q Consensus 62 ~~~~~~vsViip~~ne~~~l-~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~---------------~~~~~~~ 125 (335)
....|+|||+||+|||++.+ ++||+|+.++. ++..++||+||||||+|+|. +.++++.
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~------yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~ 209 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMI------YPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLC 209 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSS------CCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhcc------CCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHH
Confidence 34568899999999999766 88999988731 12334999999999999993 3345555
Q ss_pred HHcCCCcEEEEEcCCC-CChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCccccccccccc
Q 019818 126 RKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRIS 204 (335)
Q Consensus 126 ~~~~~~~i~vi~~~~~-~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (335)
++. +++++..++| .||++|+|.|++.++||+|+++|+|+.++|+++.++++.+.++++.+
T Consensus 210 ~~~---~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~---------------- 270 (802)
T 4hg6_A 210 REL---GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLF---------------- 270 (802)
T ss_dssp HHH---TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCC----------------
T ss_pred Hhc---CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeE----------------
Confidence 554 4777777766 78999999999999999999999999999999999999998766543
Q ss_pred CCCeeeeecchhhhhHhh-hhhhhhHH---HHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhhhccccchHH
Q 019818 205 DIPIAAFGSRAHLEEKAL-ATRKWYRN---FLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVE 280 (335)
Q Consensus 205 ~~~~~v~g~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~~~~~~~D~e 280 (335)
+|.|.....+.+.. .....+.. .....+................|++.++||++++++.+ .....++||.+
T Consensus 271 ----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGg-f~~~~~~ED~~ 345 (802)
T 4hg6_A 271 ----LVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGG-FAGETITEDAE 345 (802)
T ss_dssp ----EEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTT-CCCSSSSHHHH
T ss_pred ----EEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCC-cCCCCcchHHH
Confidence 44443221111000 00000000 00000111111111111122445567999999999943 33455778999
Q ss_pred HHHHhHHcCCCEEEee--eEEEecCCC-cccccchHHHHHHHHHHHhh
Q 019818 281 LVYLCKRFGIPIIEIS--VNWSEIPGS-KVNPLSIPNMLWELALMSVG 325 (335)
Q Consensus 281 l~~r~~~~G~~i~~~p--~~~~~~~~s-~~~~~~~~~~~~~~~~i~~~ 325 (335)
++.|+.+.|+++.++| ..+.+.+.+ +....+..|+..+..++.+.
T Consensus 346 l~~rl~~~G~ri~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~ 393 (802)
T 4hg6_A 346 TALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLL 393 (802)
T ss_dssp HHHHHHTTTCCEEECCCCCEEECCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEecCCEEEecCCCCHHHHHHHHHHHHccHHHHHHH
Confidence 9999999999999998 444444544 22345666777777666654
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=5.7e-26 Score=218.69 Aligned_cols=215 Identities=20% Similarity=0.175 Sum_probs=148.1
Q ss_pred CCCceEEEEEeccCCC-CChHHHHHHHHHHHHHhhhcCCCCc--eEEEEEECCCCcc-hHHHHHHHHHHcCCCcEEEEEc
Q 019818 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDG-TKRVAFDFVRKYTVDNVRIILL 138 (335)
Q Consensus 63 ~~~~~vsViip~~ne~-~~l~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~-t~~~~~~~~~~~~~~~i~vi~~ 138 (335)
...|.||||||+|||+ +.|.++|+|+++ |.++. +|||||||+|+|+ |.++++++.+++|. ++++++.
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~--------q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~-~v~vi~~ 96 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVIN--------RSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKV-PVHVIRM 96 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHH--------SSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSS-CEEEEEC
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHh--------cCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCC-cEEEEEC
Confidence 3568899999999999 999999999988 34444 7999999999995 99999999887763 5999999
Q ss_pred CCCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCc-ccccccccccCCCeeeeecchhh
Q 019818 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDS-VTVDSTFRISDIPIAAFGSRAHL 217 (335)
Q Consensus 139 ~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~g~~~~~ 217 (335)
++|.|++.|+|.|++.|+||+|+++|+|+.++|++|+.+++.+.+++..++ .|.. ...+..+.+........|...
T Consensus 97 ~~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 173 (472)
T 1xhb_A 97 EQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVV-CPIIDVISDDTFEYMAGSDMTYGGFN-- 173 (472)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEE-EEEEEEECSSSCCEECCCTTEEEEEC--
T ss_pred CCCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEE-EeeeeeEcCCCceeccCCCcccceee--
Confidence 999999999999999999999999999999999999999999988654332 2211 111222211110001111000
Q ss_pred hhHhhhhhhhhHHHHHHHHHHHHHHH----hCCCCccCCCceeeeeHHHHHHhhhhhh-hccc-cchHHHHHHhHHcCCC
Q 019818 218 EEKALATRKWYRNFLMKGFHLVVILT----AGPGIRDTQCGFKMFTRAAARKLFTNIR-LKRW-CFDVELVYLCKRFGIP 291 (335)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~~~-~~D~el~~r~~~~G~~ 291 (335)
+.................. .........|++.+++|++++++++... ...+ .+|.||++|+.++|++
T Consensus 174 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~ 246 (472)
T 1xhb_A 174 -------WKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGT 246 (472)
T ss_dssp -------TTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCE
T ss_pred -------ccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCe
Confidence 0000000000000000110 0122334567778999999999943322 2222 5799999999999999
Q ss_pred EEEee
Q 019818 292 IIEIS 296 (335)
Q Consensus 292 i~~~p 296 (335)
+.++|
T Consensus 247 i~~~p 251 (472)
T 1xhb_A 247 LEIVT 251 (472)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 99999
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.93 E-value=3.5e-26 Score=224.84 Aligned_cols=215 Identities=19% Similarity=0.121 Sum_probs=146.6
Q ss_pred CCCceEEEEEeccCCC-CChHHHHHHHHHHHHHhhhcCCCCc--eEEEEEECCCCcch-HHHHHHHHHHcCCCcEEEEEc
Q 019818 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGT-KRVAFDFVRKYTVDNVRIILL 138 (335)
Q Consensus 63 ~~~~~vsViip~~ne~-~~l~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~t-~~~~~~~~~~~~~~~i~vi~~ 138 (335)
...|+||||||+|||+ +.|.+||+|++++ .+.. +|||||||+|+|+| .++++++.++++ ++++++.
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~q--------t~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~ 178 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNR--------SPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRT 178 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHH--------SCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEEC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhc--------CCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEEC
Confidence 3468899999999999 9999999999984 3434 59999999999999 999999988887 8999999
Q ss_pred CCCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCccc-ccccccccCC-Ceeeeecchh
Q 019818 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVT-VDSTFRISDI-PIAAFGSRAH 216 (335)
Q Consensus 139 ~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~v~g~~~~ 216 (335)
++|.|++.|+|.|++.|+||+|+++|+|+.++|++|+.+++.+.++++.. +.+.... ...++.+... .....+..
T Consensus 179 ~~n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~v-v~~~i~~~~~~~~~~~~~~~~~~~~~~-- 255 (570)
T 2d7i_A 179 KKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTI-VCPMIDVIDHDDFRYETQAGDAMRGAF-- 255 (570)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEE-EEEEEEEECTTTCCEECCTTSSCEEEE--
T ss_pred CCCCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEE-EeeeeeccCCCchhhccccCCcccccc--
Confidence 99999999999999999999999999999999999999999998865332 1111100 0111111000 00000000
Q ss_pred hhhHhhhhhhhhHHHHHHHHH-HHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhh-hccc-cchHHHHHHhHHcCCCEE
Q 019818 217 LEEKALATRKWYRNFLMKGFH-LVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIR-LKRW-CFDVELVYLCKRFGIPII 293 (335)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~~~-~~D~el~~r~~~~G~~i~ 293 (335)
.+............ ...............|++.+++|++++++++... ...+ .+|.||++|+.++|+++.
T Consensus 256 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~ 328 (570)
T 2d7i_A 256 -------DWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRME 328 (570)
T ss_dssp -------CTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEE
T ss_pred -------cccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEE
Confidence 00000000000000 0000000112233557788999999999943322 2222 679999999999999999
Q ss_pred Eeee
Q 019818 294 EISV 297 (335)
Q Consensus 294 ~~p~ 297 (335)
++|.
T Consensus 329 ~~p~ 332 (570)
T 2d7i_A 329 DIPC 332 (570)
T ss_dssp EEEE
T ss_pred EccC
Confidence 9993
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.92 E-value=5e-25 Score=213.66 Aligned_cols=211 Identities=15% Similarity=0.085 Sum_probs=142.3
Q ss_pred CCCceEEEEEeccCCCC-ChHHHHHHHHHHHHHhhhcCCCCc--eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC
Q 019818 63 PAEKYISLIIPAFNEEH-RLPGALDETLNYLQQRAAKDKSFT--YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG 139 (335)
Q Consensus 63 ~~~~~vsViip~~ne~~-~l~~~l~sl~~~~~~~~~~~~~~~--~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~ 139 (335)
...|.||||||+|||+. .|.++|+|++++ .+.+ +|||||||||+|+|.+. ..++++ ++++++.+
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q--------~~~~~~~EIIvVDDgS~D~t~~~---~~~~~~--~v~vi~~~ 129 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKK--------SPPHLIKEIILVDDYSNDPEDGA---LLGKIE--KVRVLRND 129 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHH--------SCGGGEEEEEEEECSCSCTHHHH---GGGGBT--TEEEEECS
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhh--------CchhhceeEEEEECCCCchHHHH---HHhcCC--CEEEEECC
Confidence 45688999999999997 899999999985 3333 69999999999999643 335667 89999999
Q ss_pred CCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcc-cccccccccCCCeeeeecchhhh
Q 019818 140 RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSV-TVDSTFRISDIPIAAFGSRAHLE 218 (335)
Q Consensus 140 ~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~g~~~~~~ 218 (335)
+|.|++.|+|.|++.|+||+|+++|+|++++|++|+.+++.+.+++.. ++.+... ..+.++.+........|...
T Consensus 130 ~n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~--- 205 (501)
T 2ffu_A 130 RREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTR-VVSPIIDVINMDNFQYVGASADLKGGFD--- 205 (501)
T ss_dssp SCCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECBCSSEEEEEC---
T ss_pred CCcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCe-EEEeeeccCcCCCceeecCCcccceEee---
Confidence 999999999999999999999999999999999999999999876542 2222111 11111111110000011000
Q ss_pred hHhhhhhhhhHHHHHHHHHHHHHHH----hCCCCccCCCceeeeeHHHHHHhhhhhh-hccc-cchHHHHHHhHHcCCCE
Q 019818 219 EKALATRKWYRNFLMKGFHLVVILT----AGPGIRDTQCGFKMFTRAAARKLFTNIR-LKRW-CFDVELVYLCKRFGIPI 292 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~~~-~~D~el~~r~~~~G~~i 292 (335)
+.....+............ .........|++.+++|++++++.+... ...+ .+|.||++|+.+.|+++
T Consensus 206 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i 279 (501)
T 2ffu_A 206 ------WNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSL 279 (501)
T ss_dssp ------TTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEE
T ss_pred ------ecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeE
Confidence 0000000000000000110 1112334567788999999999943322 2223 68999999999999999
Q ss_pred EEee
Q 019818 293 IEIS 296 (335)
Q Consensus 293 ~~~p 296 (335)
.++|
T Consensus 280 ~~~p 283 (501)
T 2ffu_A 280 EIIP 283 (501)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 9999
No 9
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.92 E-value=3.4e-24 Score=200.07 Aligned_cols=195 Identities=17% Similarity=0.136 Sum_probs=136.1
Q ss_pred EEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcC---CCcEEEEEcC--C--C
Q 019818 69 SLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT---VDNVRIILLG--R--N 141 (335)
Q Consensus 69 sViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~---~~~i~vi~~~--~--~ 141 (335)
|||||.+||+ +|+.+++++.... ..+.+|||||||||+|+|.+++++++++.+ +.++..+... . |
T Consensus 2 slVIiP~~eE-~I~~vl~~l~~~~-------~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n 73 (397)
T 2bo4_A 2 SLVVFPFKHE-HPEVLLHNVRVAA-------AHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLR 73 (397)
T ss_dssp CEEEEECCSS-CHHHHHHHHHHHH-------HSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSS
T ss_pred cEEEEeCCcc-CHHHHHHHHHHhc-------cCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCC
Confidence 3444445553 6888888886432 133689999999999999999997765543 1133333222 3 8
Q ss_pred CChHHHHHHHH----HhcCCCEEEEEeCCCC-CCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchh
Q 019818 142 HGKGEAIRKGM----LHSRGELLLMLDADGA-TKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAH 216 (335)
Q Consensus 142 ~Gk~~aln~g~----~~a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~ 216 (335)
.||+.|++.|+ +.++||+|+++|||.+ .+|+++.+|++.+.++ + ++|+|.+..
T Consensus 74 ~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g----~------------------D~V~g~~~r 131 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFG----Y------------------GLVRHYFPR 131 (397)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTT----C------------------SEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcC----C------------------CEEEEEecc
Confidence 99999999999 8899999999999996 8999999999988542 2 888886432
Q ss_pred hhhHhhhhhhhhHHHH-HHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhh---hhccccchHHHHHHhHHcCCCE
Q 019818 217 LEEKALATRKWYRNFL-MKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNI---RLKRWCFDVELVYLCKRFGIPI 292 (335)
Q Consensus 217 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~---~~~~~~~D~el~~r~~~~G~~i 292 (335)
.... +...+.. ...+...........+.++.+|+++|+|++++.+.... ...+|++|.++..++.+.|++|
T Consensus 132 ~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI 206 (397)
T 2bo4_A 132 ASTD-----AMITWMITRTGFALLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSI 206 (397)
T ss_dssp CTTS-----CHHHHHTHHHHHHHHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCE
T ss_pred ccCC-----cHHHHHHHHHHHHHHHHHhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEE
Confidence 1111 1111111 11111111111112567788999999999999884321 4567889999999999999999
Q ss_pred EEeeeE
Q 019818 293 IEISVN 298 (335)
Q Consensus 293 ~~~p~~ 298 (335)
.++|+.
T Consensus 207 ~EVpig 212 (397)
T 2bo4_A 207 YECYIP 212 (397)
T ss_dssp EEEECT
T ss_pred EEEECc
Confidence 999974
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.92 E-value=5.7e-24 Score=211.58 Aligned_cols=192 Identities=20% Similarity=0.214 Sum_probs=144.0
Q ss_pred CCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 019818 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (335)
Q Consensus 64 ~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~G 143 (335)
..|.||||||+||+++.|.+||+|+++ |.+.++|||||||||+|+|.++++++.++++ +++++. .+|.|
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~--------q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~--~i~~~~-~~n~G 441 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALN--------QTITDLEVCICDDGSTDDTLRILQEHYANHP--RVRFIS-QKNKG 441 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHS--------SSCCSEEEEEEEESCSSSHHHHHHHHHTTCT--TEEEEE-ECCCC
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHh--------CcCCCeEEEEEECcCChhHHHHHHHHHhhCC--cEEEEe-CCCCC
Confidence 467899999999999999999999987 5778999999999999999999999888777 899887 67999
Q ss_pred hHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHhh-
Q 019818 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKAL- 222 (335)
Q Consensus 144 k~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~- 222 (335)
++.|+|.|++.|+||||+++|+|+.++|++|..+++.+.++++.++ |.+........+.
T Consensus 442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~--------------------v~~~~~~~~~~~~~ 501 (625)
T 2z86_A 442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLAC--------------------VYTTNRNIDREGNL 501 (625)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSE--------------------EEEEEEEECTTSCE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeE--------------------EEeeeEEECCCCCE
Confidence 9999999999999999999999999999999999999987665433 3332111100000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhhhccccchHHHHHHhHHcCCCEEEee
Q 019818 223 ATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIEIS 296 (335)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~~~~~~~D~el~~r~~~~G~~i~~~p 296 (335)
....+...... . ..+.. ....+++.+++|++++++++......+.+|.||+.|+...| ++.++|
T Consensus 502 ~~~~~~~~~~~--~----~~~~~---~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~ 565 (625)
T 2z86_A 502 ISNGYNWPIYS--R----EKLTS---AMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHIN 565 (625)
T ss_dssp EEECCCCSSCC--H----HHHTT---SCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEE
T ss_pred eccCcccccCC--H----HHHhh---cccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeC
Confidence 00000000000 0 00111 12344567899999999854333334568999999999999 999998
No 11
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.91 E-value=3e-24 Score=213.27 Aligned_cols=257 Identities=14% Similarity=0.047 Sum_probs=157.9
Q ss_pred CCCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcc--hHHHHHHHHHHcCCCcEEEEEcCC
Q 019818 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDG--TKRVAFDFVRKYTVDNVRIILLGR 140 (335)
Q Consensus 63 ~~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~--t~~~~~~~~~~~~~~~i~vi~~~~ 140 (335)
+..|+||||||+||+++.|.+||+|+.++.+. ....+|||||||||+|+ +....+......+ +++++..+
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~-----~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~--~I~vI~~~- 248 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLV-----DQVIGAVIVPDQGERKVRDHPDFPAAAARLGS--RLSIHDQP- 248 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHH-----HTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG--GEEEEECC-
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccc-----cCCCCEEEEEECcCCCccchHHHHHHHHhcCC--CEEEEECC-
Confidence 34578999999999999999999999885431 12467999999999984 3333443434445 89999988
Q ss_pred CCChHHHHHHHHHhc----CCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchh
Q 019818 141 NHGKGEAIRKGMLHS----RGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAH 216 (335)
Q Consensus 141 ~~Gk~~aln~g~~~a----~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~ 216 (335)
|.|.++|.|.|++.| .+|||+++|+|+.++|++|.++++.++.+++.+++.|.....+..-.....-..+-.....
T Consensus 249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~ 328 (657)
T 4fix_A 249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFM 328 (657)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccc
Confidence 999999999999998 4589999999999999999999999998766554444333222211000000000000000
Q ss_pred -hh-hHhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhhhccccchHHHHHHhHHcCCCEEE
Q 019818 217 -LE-EKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIRLKRWCFDVELVYLCKRFGIPIIE 294 (335)
Q Consensus 217 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~~~~~~~D~el~~r~~~~G~~i~~ 294 (335)
.. ........+...-................+....+++.+++|++++++++......+.+|.|+++|+.++|+++.+
T Consensus 329 ~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~ 408 (657)
T 4fix_A 329 WTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVT 408 (657)
T ss_dssp EEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEE
T ss_pred ccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEE
Confidence 00 0000000000000000000000111123344456667899999999994333444456899999999999999999
Q ss_pred ee--eEEEecCCCcc--cccchHHHHHHHHHHHhhhh
Q 019818 295 IS--VNWSEIPGSKV--NPLSIPNMLWELALMSVGYR 327 (335)
Q Consensus 295 ~p--~~~~~~~~s~~--~~~~~~~~~~~~~~i~~~y~ 327 (335)
+| ..++....++. +.++......+.+.+..++.
T Consensus 409 ~p~a~V~H~~~~~~~~~s~~r~Yy~~RN~l~~~~k~~ 445 (657)
T 4fix_A 409 LPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHW 445 (657)
T ss_dssp EEEEEEEECCSSSSCCTTSTHHHHHHHHHHHHHHHHC
T ss_pred ECCEEEEEcCcCccccccHHHHHHHHHHHHHHHHHhC
Confidence 98 34443322222 22455556666666555554
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=1.3e-22 Score=201.76 Aligned_cols=202 Identities=16% Similarity=0.149 Sum_probs=139.8
Q ss_pred CCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-CC
Q 019818 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-NH 142 (335)
Q Consensus 64 ~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-~~ 142 (335)
..|.||||||+||+++.|.++|+++.++ ..+.++|||||||||+|+|.++++++... + +++++..+. +.
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q-------~~~~~~eiivvDd~s~d~t~~~~~~~~~~-~--~i~~i~~~~~~~ 160 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQ-------KTIYDYEVIVADDGSKENIEEIVREFESL-L--NIKYVRQKDYGY 160 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTC-------CCSSCEEEEEEEESCSSCHHHHHHTTTTT-S--CEEEEEECCCSC
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhh-------ccCCCeEEEEEeCCCchhHHHHHHHhhhc-C--CeEEEEeCCCCc
Confidence 3478999999999999999999998872 23348999999999999999999887543 2 688888764 34
Q ss_pred ChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHhh
Q 019818 143 GKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKAL 222 (335)
Q Consensus 143 Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~ 222 (335)
|+++|+|.|++.++||+|+++|+|+.++|++|..+++.+.+++..+ ++|.+........
T Consensus 161 g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~---------------------~~g~~~~~~~~~~ 219 (625)
T 2z86_A 161 QLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVA---------------------LIGPRKYIDTSKH 219 (625)
T ss_dssp CHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEE---------------------EECCEEEECCTTC
T ss_pred chhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceE---------------------EEEeeeeccCccc
Confidence 6999999999999999999999999999999999999998765433 3333221110000
Q ss_pred ------hhhhhhHH-------------HH-----HHHHHHHHH--HH--hCCCCccCCCceeeeeHHHHHHhhhhhh-hc
Q 019818 223 ------ATRKWYRN-------------FL-----MKGFHLVVI--LT--AGPGIRDTQCGFKMFTRAAARKLFTNIR-LK 273 (335)
Q Consensus 223 ------~~~~~~~~-------------~~-----~~~~~~~~~--~~--~~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~ 273 (335)
........ .. ......... .. .........|++.+++|++++++++... ..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~ 299 (625)
T 2z86_A 220 TYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFT 299 (625)
T ss_dssp CHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCS
T ss_pred chhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccc
Confidence 00000000 00 000000000 00 0111223566678999999999943222 22
Q ss_pred cc-cchHHHHHHhHHcCCCEEEee
Q 019818 274 RW-CFDVELVYLCKRFGIPIIEIS 296 (335)
Q Consensus 274 ~~-~~D~el~~r~~~~G~~i~~~p 296 (335)
.+ .+|.|++.|+.++|+++.++|
T Consensus 300 ~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 300 HWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp SCCCHHHHHHHHHHHTTCEEEECG
T ss_pred cCCcchhhhhhhHHhCCceEEEcc
Confidence 22 589999999999999999998
No 13
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.88 E-value=1.2e-24 Score=220.04 Aligned_cols=196 Identities=16% Similarity=0.232 Sum_probs=0.0
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChH
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKG 145 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~ 145 (335)
|+||||||+||+++.|.+||+|+++| ++.++|||||||||+|+|.++++++.++++. +++++..++|.|.+
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Q--------t~~~~EIIVVDDgStD~t~~il~~~~~~~~~-~i~~i~~~~n~G~~ 72 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQ--------RTQDFNLIIVNDGSTDQSKKLMDEAIKDYDK-NIRFIDLDENSGHA 72 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhC--------CCCCeEEEEEECCCCCcHHHHHHHHHHhCCC-CEEEEECCCCCCHH
Confidence 67999999999999999999999984 5668999999999999999999999887542 79999999999999
Q ss_pred HHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHhhhhh
Q 019818 146 EAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATR 225 (335)
Q Consensus 146 ~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~ 225 (335)
+|+|.|++.|+||+|+++|+|+.++|++|+.+++.+. +. ++++|.............
T Consensus 73 ~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~----------------------d~v~~~~~~~~~~~~~~~ 129 (729)
T 3l7i_A 73 HARNIALEEVETPYFMFLDADDELASYAITFYLEKFN-NT----------------------DGLIAPIHSFTTQRPQFV 129 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CC----------------------CEEEEeeEEeecCCCccc
Confidence 9999999999999999999999999999999999997 22 344443321111100000
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhh-hhccccchHHHHHHhHHcCCCEEEe-e
Q 019818 226 KWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNI-RLKRWCFDVELVYLCKRFGIPIIEI-S 296 (335)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~-~~~~~~~D~el~~r~~~~G~~i~~~-p 296 (335)
. ......... ..............++..+|||++++++.... ....+.+|.+++.|+...|.++.++ +
T Consensus 130 ~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 130 D-LDRVRVEYF--NAKENINSFLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp -------------------------------------------------------------------------
T ss_pred c-ccceeeeee--cchhhHHHHhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecC
Confidence 0 000000000 00000001111234445799999999884222 2224678999999999999999999 5
No 14
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.77 E-value=3.2e-17 Score=150.83 Aligned_cols=224 Identities=17% Similarity=0.158 Sum_probs=143.7
Q ss_pred eEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcch------HHHHHHHHHHcCCCcEEEEEcCC
Q 019818 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT------KRVAFDFVRKYTVDNVRIILLGR 140 (335)
Q Consensus 67 ~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t------~~~~~~~~~~~~~~~i~vi~~~~ 140 (335)
++|||||+|||+. .++..++.. -...+|||+|||||+|+| .+.++++++..+. .+.+++...
T Consensus 52 ~iSVVIP~yNEE~---~lI~~vL~~--------i~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~-~~~Vl~~~~ 119 (394)
T 2zu9_A 52 KMAVIVPMKNEKL---HLVDGVLKA--------IPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHS-KIIMIHQKD 119 (394)
T ss_dssp TEEEEEEESSCCH---HHHHHHHHH--------SCTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCC-CEEEEETTC
T ss_pred CEEEEEecCcccH---HHHHHHHHc--------CCCCcEEEEEECcCcccccchhhHHHHHHHHhhcccc-ceEEEecCC
Confidence 5999999999994 345666553 233689999999998877 7788887766442 566776653
Q ss_pred ----------------------CCChHHHHHHHHHhc---CCCEEEEEeCCCCCCcchHHHHHHHHHHhc---cccccCC
Q 019818 141 ----------------------NHGKGEAIRKGMLHS---RGELLLMLDADGATKVTDLEKLESQIHAVG---RKEYNHG 192 (335)
Q Consensus 141 ----------------------~~Gk~~aln~g~~~a---~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~---~~~~~~~ 192 (335)
+.||+.|+..|+..| ++|+|+++|||. ..|..+.++++.+..+- ...+
T Consensus 120 p~v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~~~a~~~~--- 195 (394)
T 2zu9_A 120 PGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGFLMSESEY--- 195 (394)
T ss_dssp HHHHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHHHHCCSSS---
T ss_pred cchhHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhccccccccc---
Confidence 259999999999999 999999999999 67888877777665420 1111
Q ss_pred CcccccccccccCCCeee-eecchhhh--hHhh--hhhhhhHHHHHHHHHHHHHHHhCCCC---ccCCCceeeeeHHHHH
Q 019818 193 DSVTVDSTFRISDIPIAA-FGSRAHLE--EKAL--ATRKWYRNFLMKGFHLVVILTAGPGI---RDTQCGFKMFTRAAAR 264 (335)
Q Consensus 193 ~~~~~~~~~~~~~~~~~v-~g~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~r~~l~ 264 (335)
+.| +|.+.... .... ...+...++.++..+.+.+.+.+... ..+.+|.++|+|++++
T Consensus 196 ---------------dmVR~~~r~~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~~~l~g~~~d~~~tplsGe~A~rr~ll~ 260 (394)
T 2zu9_A 196 ---------------TMVRLHWRHKPKVTKGTLYFKKWGRVSEITNHYLNLLVSEHTAFETTIMVTGNAGEHAMTMKLAE 260 (394)
T ss_dssp ---------------EEEEEECC-----------------HHHHHHHHHHHHHHHHHSSCCCCCCCTTCSSEEEEHHHHT
T ss_pred ---------------ceeeeccccccccccccccccCCCceehhHHHHHHHHHHHhcCccccCcCCCCchhhHhhHHHHh
Confidence 555 45443210 0000 12344445666665666666655432 2255689999999999
Q ss_pred HhhhhhhhccccchHHHHHHhHHc----------------CCCEEEeeeEEEecCCCcccccchHHHHHHHHHHHhh
Q 019818 265 KLFTNIRLKRWCFDVELVYLCKRF----------------GIPIIEISVNWSEIPGSKVNPLSIPNMLWELALMSVG 325 (335)
Q Consensus 265 ~i~~~~~~~~~~~D~el~~r~~~~----------------G~~i~~~p~~~~~~~~s~~~~~~~~~~~~~~~~i~~~ 325 (335)
.+ ... .+|+...++...+.++ |.+|..+...+-.... .......-+|....+...++
T Consensus 261 ~L--~~~-~gyGvE~~lLv~~~r~~~~~~~~~~~~~~~~~g~~I~qve~~~pH~H~-~~g~~~l~~M~~~~~~~i~~ 333 (394)
T 2zu9_A 261 IL--PFS-TGYSIEPYEIVYILERFGKWENVEEFKDVFDQGIEIFQIETLNPHFHE-DKGKEHVKEMLLLSLATIYH 333 (394)
T ss_dssp TC--CEE-SGGGHHHHHHHHHHHHHSSCCSCGGGHHHHHHCEEEEEEECSSCCCBC-CCCHHHHHHHHHHHHHHHHT
T ss_pred cC--CCC-CCCCCCHHHHHHHHHhhCccccccccccccccCceEEEEeccCCcccc-ccchhHHHHHHHHHHHHHHh
Confidence 87 222 5788899999988888 7788877643221111 11233445565555544443
No 15
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.76 E-value=2.5e-18 Score=151.57 Aligned_cols=88 Identities=11% Similarity=0.112 Sum_probs=75.0
Q ss_pred CCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 019818 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (335)
Q Consensus 64 ~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~G 143 (335)
..+.+||| |+||+++.|++||+|+.+++.. |.+ +|||||||+|+|. .|
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~----q~~--~EiIVVDn~s~d~-------------------------~g 61 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFT----PDK--AEFLAADNREGNQ-------------------------FH 61 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCC----TTT--EEEEEEECTTSCS-------------------------CC
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccC----CCc--EEEEEEECCCCCc-------------------------cc
Confidence 34679975 6799999999999988775432 232 9999999999862 36
Q ss_pred hHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHH
Q 019818 144 KGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHA 183 (335)
Q Consensus 144 k~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~ 183 (335)
.+.|+|.|++.|+|||++++|+|+.+++++|+.+++.+++
T Consensus 62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 6889999999999999999999999999999999999986
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.70 E-value=4.4e-16 Score=139.39 Aligned_cols=170 Identities=14% Similarity=0.122 Sum_probs=122.9
Q ss_pred CceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcch---HHHHHHHHHH-cCCCcEEEEEcC-
Q 019818 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT---KRVAFDFVRK-YTVDNVRIILLG- 139 (335)
Q Consensus 65 ~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t---~~~~~~~~~~-~~~~~i~vi~~~- 139 (335)
..++|||||+|||+ ..+|+++++ |.+.++|||+|||||+|.| .++++++++. .. ++.+++..
T Consensus 52 ~~klSIVVPvYNEe---~~lLesVl~--------qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~--ri~viHQkn 118 (391)
T 2wvl_A 52 LEQTAIVVPTRNER---LKLLEGVLS--------GIPHEALILVASNSSPDRFQMERDLLEEFAHLTER--PALIFHQKD 118 (391)
T ss_dssp HTTEEEEEEESSCC---HHHHHHHHH--------TSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTC--CEEEEETTC
T ss_pred HhceEEEEeccCcH---HHHHHHHHh--------cCCCCceEEEEECCCCCChHhHHHHHHHHHhhccc--ceEEEeccC
Confidence 45799999999999 467888888 5777999999999999999 5788888874 44 78888742
Q ss_pred ---------------------CCCChHHHHHHHHHhc---CCCEEEEEeCCCCCCcchHHHHHHHHHHh---ccccccCC
Q 019818 140 ---------------------RNHGKGEAIRKGMLHS---RGELLLMLDADGATKVTDLEKLESQIHAV---GRKEYNHG 192 (335)
Q Consensus 140 ---------------------~~~Gk~~aln~g~~~a---~~d~v~~~DaD~~~~~~~l~~l~~~~~~~---~~~~~~~~ 192 (335)
.+.||+.++..|+..| .++||.|+|||+.++.+..+.+ ..+..+ ....+
T Consensus 119 ~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyv-k~yaag~~~a~s~~--- 194 (391)
T 2wvl_A 119 PALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYV-RAYAAGFLMAKTPF--- 194 (391)
T ss_dssp HHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHH-HHHHHHHHHCCSSE---
T ss_pred hHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHH-HHHHHHhcccCCCc---
Confidence 2356777777788888 6999999999999976665543 444333 11112
Q ss_pred CcccccccccccCCCeee-eecchhhh--h---HhhhhhhhhHHHHHHHHHHHHHHHhCCCCc---cCCCceeeeeHHHH
Q 019818 193 DSVTVDSTFRISDIPIAA-FGSRAHLE--E---KALATRKWYRNFLMKGFHLVVILTAGPGIR---DTQCGFKMFTRAAA 263 (335)
Q Consensus 193 ~~~~~~~~~~~~~~~~~v-~g~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~r~~l 263 (335)
..| +|+|.+.. + -....++..++..++.++.+.+...+.... ...+|=.+++-+..
T Consensus 195 ---------------~MVRI~wR~kPK~~~~~~l~f~k~Grvs~itNr~lN~Lis~~~g~et~ii~TgNAGEHAmt~~LA 259 (391)
T 2wvl_A 195 ---------------AMVRILWRYKPKLTEDEGVVFRRYGRVSERNNRALNQLIGGVSGFETDVVKTANAGEHAMSLGLA 259 (391)
T ss_dssp ---------------EEEEEECCCCC------CCHHHHTHHHHHHHHHHHHHHHHHHHSSCCCCCCCSSCSSEEEEHHHH
T ss_pred ---------------ceEEEecccCcccccCCceeEeecCccchhhHHHHHHHHHHhhCcccceEeccCchhhhhhHHHH
Confidence 677 88887432 1 234567788899999999999888776643 33344456777666
Q ss_pred HHh
Q 019818 264 RKL 266 (335)
Q Consensus 264 ~~i 266 (335)
+.+
T Consensus 260 ~~l 262 (391)
T 2wvl_A 260 LRL 262 (391)
T ss_dssp TTS
T ss_pred Hhc
Confidence 554
No 17
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.67 E-value=3.7e-16 Score=140.09 Aligned_cols=152 Identities=14% Similarity=0.124 Sum_probs=105.4
Q ss_pred CCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC
Q 019818 64 AEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG 143 (335)
Q Consensus 64 ~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~G 143 (335)
..|+||||||+||+++.|.++|+++...+. |.+.++||+||||++ |+ ..+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~-----q~~~~~EIiVVdds~-d~------------------------~f~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQ-----RQQLDYGIYVINQAG-DT------------------------IFN 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHH-----HTTCEEEEEEEEECS-SS------------------------CCC
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHH-----HhcCCceEEEEEeCC-CC------------------------ccc
Confidence 457899999999999999999999985333 256789999999943 31 136
Q ss_pred hHHHHHHHH----HhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhh
Q 019818 144 KGEAIRKGM----LHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEE 219 (335)
Q Consensus 144 k~~aln~g~----~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~ 219 (335)
++.++|.|+ +.|+||+|+++|+|+.+.++.+. +..+. .+.. ++... .
T Consensus 113 ~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~-------------~~~~~------------~p~~-~~~~~--~- 163 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNA-------------YRCFS------------QPRH-ISVAM--D- 163 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSC-------------CSCCS------------SCEE-CCCEE--G-
T ss_pred hhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcce-------------EecCC------------CCce-EEEee--c-
Confidence 888999999 88999999999999999999521 10110 0011 00000 0
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhh-hhcccc-chHHHHHHhHHcCCCEEEe
Q 019818 220 KALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNI-RLKRWC-FDVELVYLCKRFGIPIIEI 295 (335)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~-~~~~~~-~D~el~~r~~~~G~~i~~~ 295 (335)
.+ ..........|++.+++|++++++.+.. ...+|+ ||.||+.|+.++|+++...
T Consensus 164 ------~~---------------~~~~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~ 220 (287)
T 2fy7_A 164 ------KF---------------GFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRP 220 (287)
T ss_dssp ------GG---------------TTSCSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCC
T ss_pred ------cc---------------ccCCCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEec
Confidence 00 0011223455778899999999994332 223443 8999999999999999843
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.90 E-value=2.6e-09 Score=97.44 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=80.5
Q ss_pred eEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCC-CCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEE--------
Q 019818 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDK-SFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL-------- 137 (335)
Q Consensus 67 ~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~-~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~-------- 137 (335)
.++|+|++||..+ +.++|++++++ ++ ..+++|||.|||+.++|.++++++..+ +..+.
T Consensus 3 ~~pViI~~yNRp~-l~~~L~sL~~~-------~p~~~~~~iivsdDgs~~~~~~vi~~~~~~-----I~~~~~~d~~~~~ 69 (343)
T 1fo8_A 3 VIPILVIACDRST-VRRCLDKLLHY-------RPSAELFPIIVSQDCGHEETAQVIASYGSA-----VTHIRQPDLSNIA 69 (343)
T ss_dssp CCCEEEEESSCTT-HHHHHHHHHHH-------CSCTTTSCEEEEECTTCHHHHHHHHTTGGG-----SEEEECSCCCCCC
T ss_pred cccEEEEECCcHH-HHHHHHHHHhc-------CCCcCCcEEEEEECCCCHHHHHHHHHcCCc-----eEEEEcCCccccc
Confidence 4789999999998 99999999984 22 346899999999999999998876432 33322
Q ss_pred -cCCCCChH----------HHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHH
Q 019818 138 -LGRNHGKG----------EAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIH 182 (335)
Q Consensus 138 -~~~~~Gk~----------~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~ 182 (335)
.++|.|.. .|+|.++..+++++++++|+|+.+.|+++.-+.+.++
T Consensus 70 ~~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~ 125 (343)
T 1fo8_A 70 VQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYP 125 (343)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHH
T ss_pred cchhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHH
Confidence 34455532 5777777777899999999999999999977776664
No 19
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=97.95 E-value=1.8e-06 Score=70.96 Aligned_cols=109 Identities=14% Similarity=-0.011 Sum_probs=72.8
Q ss_pred HhcCCCEEEEEeCC---CCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHhhhhhhhhH
Q 019818 153 LHSRGELLLMLDAD---GATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYR 229 (335)
Q Consensus 153 ~~a~~d~v~~~DaD---~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~ 229 (335)
+....|+++++||| ...+|+.+.+++ +.+. ++|.|++....... .+...
T Consensus 50 ~~~~~dhllfIDAD~~~I~FdPe~V~rLl---~~g~----------------------DVV~GsYp~K~~~~---~s~~a 101 (203)
T 2c0n_A 50 EMKDYDTLAFLDEDVVPIEIDFQKVEAKF---NEGY----------------------DVVCGYYYLKTLRG---YSVYR 101 (203)
T ss_dssp HCTTCCEEEEECTTEEEEECCHHHHHHHH---HHTC----------------------SEEEEECBCTTSSS---BSEES
T ss_pred hcCCCCEEEEEeCCCCccccCHHHHHHHH---hCCC----------------------CEEEEEeeccCCCc---cchHH
Confidence 33567999999999 999999999998 2221 89999886532110 00000
Q ss_pred HHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhh--------hhccccchHHHHHHhHHcCCCEEEee
Q 019818 230 NFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNI--------RLKRWCFDVELVYLCKRFGIPIIEIS 296 (335)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~--------~~~~~~~D~el~~r~~~~G~~i~~~p 296 (335)
+ .....+.+.++.+.++||.+++|++++++...+ ....++||..||..+..+|+.+--+.
T Consensus 102 ~-------~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~ 169 (203)
T 2c0n_A 102 K-------DWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLK 169 (203)
T ss_dssp S-------SBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEEE
T ss_pred H-------HHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccccccc
Confidence 0 011112234788899999999999999982221 22467789999999999998875544
No 20
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.78 E-value=0.00048 Score=59.98 Aligned_cols=156 Identities=14% Similarity=0.192 Sum_probs=102.9
Q ss_pred CCCCCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC
Q 019818 61 TDPAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR 140 (335)
Q Consensus 61 ~~~~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~ 140 (335)
.....-+|+||||.+|.++.|...|.-+...+.. ....+.|+||+.. |+ .
T Consensus 46 ~c~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~r-----Q~l~y~I~VieQ~--~~-----------------------~ 95 (287)
T 3lw6_A 46 DGASVHKMALLVPFRDRFEELLQFVPHMTAFLKR-----QGVAHHIFVLNQV--DR-----------------------F 95 (287)
T ss_dssp -CCCCCEEEEEEEESSCHHHHHHHHHHHHHHHHH-----TTCEEEEEEEEEC--SS-----------------------S
T ss_pred ccCCcceEEEEEEeCCHHHHHHHHHHHHHHHHHH-----cCCceEEEEEecC--CC-----------------------C
Confidence 3345568999999999999999998888877776 3556889888863 11 2
Q ss_pred CCChHHHHHHHHHhcC--CCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhh
Q 019818 141 NHGKGEAIRKGMLHSR--GELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLE 218 (335)
Q Consensus 141 ~~Gk~~aln~g~~~a~--~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~ 218 (335)
...++..+|.|+..|. .|++++-|.|..+..+... |..+. ..+|.-+....
T Consensus 96 ~FNRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n~-------------Y~c~~----------~~~P~Hls~~~---- 148 (287)
T 3lw6_A 96 RFNRASLINVGFQFASDVYDYIAMHDVDLLPLNDNLL-------------YEYPS----------SLGPLHIAGPK---- 148 (287)
T ss_dssp CCCHHHHHHHHHHHSCTTCCEEEEECTTEEECCTTSC-------------CCCCC----------TTCCEESSCTT----
T ss_pred ccchhheecccHHHHhccCCEEEEecccccccCCCcc-------------ccCCC----------CCCceEEeecc----
Confidence 3568889999999985 5999999999987544221 10000 00000000000
Q ss_pred hHhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhh-hccc-cchHHHHHHhHHcCCCEEEee
Q 019818 219 EKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIR-LKRW-CFDVELVYLCKRFGIPIIEIS 296 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~~~-~~D~el~~r~~~~G~~i~~~p 296 (335)
.-.........||..+++++.+.++.+..+ ..+| .||.|+..|+..+|+++...+
T Consensus 149 -----------------------~~~~~~Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~ 205 (287)
T 3lw6_A 149 -----------------------LHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ 205 (287)
T ss_dssp -----------------------TCSSCCCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred -----------------------ccCCCCcCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence 000123344567888999999999933322 1222 469999999999999998764
No 21
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=94.72 E-value=0.2 Score=42.93 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=64.9
Q ss_pred CceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCC--CcchHHHHHHHHHHcCCCcEEEEEcCCC-
Q 019818 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILLGRN- 141 (335)
Q Consensus 65 ~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~vi~~~~~- 141 (335)
.|.|-||-|+|.......+ |..+.+.+.. -+++.-|||+|+. ++.+.+++++. ++.+.+..-.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~------Vp~L~WIVVEd~~~~t~~va~lL~~s-------gl~y~HL~~~~ 67 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAE-LTRMANTLLH------VPNLHWLVVEDAPRRTPLTARLLRDT-------GLNYTHLHVET 67 (253)
T ss_dssp CCEEEEEEEECCSTTHHHH-HHHHHHHHTT------SSSEEEEEEESSSSCCHHHHHHHHHH-------CCEEEEEECCC
T ss_pred CCEEEEEeCCCCccchhHH-HHHHhhhhcc------CCceEEEEEeCCCCCCHHHHHHHHHc-------CCceEEeecCC
Confidence 4779999999999755443 5666666643 4589999999954 57777777766 4444444211
Q ss_pred ------------C---ChHHHHHHHHHhcC---------CCEEEEEeCCCCCCcchHHH
Q 019818 142 ------------H---GKGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEK 176 (335)
Q Consensus 142 ------------~---Gk~~aln~g~~~a~---------~d~v~~~DaD~~~~~~~l~~ 176 (335)
. --...+|.|++..+ .-+|.|.|+|...+-+..++
T Consensus 68 p~~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~e 126 (253)
T 1v84_A 68 PRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEE 126 (253)
T ss_dssp CHHHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHH
T ss_pred CccccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHH
Confidence 1 11357889997753 24567778888877666655
No 22
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=94.27 E-value=0.29 Score=42.44 Aligned_cols=100 Identities=13% Similarity=0.079 Sum_probs=63.4
Q ss_pred CCCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCC--CcchHHHHHHHHHHcCCCcEEEEEcC-
Q 019818 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILLG- 139 (335)
Q Consensus 63 ~~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~vi~~~- 139 (335)
...|.|-||-|+|.......+ |..+.+.+.. -+++.-|||+|+. ++.+.+++++. ++.+.+..
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~-LtRLa~TL~~------Vp~L~WIVVEd~~~~t~~va~lL~rs-------Gl~y~HL~~ 83 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAE-LVRLSQTLSL------VPRLHWLLVEDAEGPTPLVSGLLAAS-------GLLFTHLVV 83 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHH-HHHHHHHHTT------SSSEEEEEEESSSSCCHHHHHHHHHH-------CSEEEEEEC
T ss_pred CCCCeEEEEeCCCCCcchhHH-HHHHHHHHhc------CCceEEEEEcCCCCCCHHHHHHHHHc-------CCceEEecc
Confidence 346789999999999765443 4666666553 3489999999963 56677777765 34443332
Q ss_pred -CCCC--------------hHHHHHHHHHhcC----------------C-CEEEEEeCCCCCCcchHHH
Q 019818 140 -RNHG--------------KGEAIRKGMLHSR----------------G-ELLLMLDADGATKVTDLEK 176 (335)
Q Consensus 140 -~~~G--------------k~~aln~g~~~a~----------------~-d~v~~~DaD~~~~~~~l~~ 176 (335)
.+.. -...+|.|++..+ . -+|.|.|+|...+-+..++
T Consensus 84 ~~p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde 152 (281)
T 3cu0_A 84 LTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE 152 (281)
T ss_dssp CCC-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred CCCccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence 1111 1356899997766 2 3566778888877665555
No 23
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=93.68 E-value=0.79 Score=38.50 Aligned_cols=72 Identities=15% Similarity=0.161 Sum_probs=47.7
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-----CCChHHHHHHHHHhc-CCCEEEEEeCCCC-CCcchHHH
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-----NHGKGEAIRKGMLHS-RGELLLMLDADGA-TKVTDLEK 176 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-----~~Gk~~aln~g~~~a-~~d~v~~~DaD~~-~~~~~l~~ 176 (335)
-+|+|+.+ .+. +++...++ ++.++..++ ..|-..++..|++.. ..|.++++++|.. ++++.+.+
T Consensus 45 ~~ivv~~~--~~~----i~~~~~~~---g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~ 115 (229)
T 1qwj_A 45 QSVWVSTD--HDE----IENVAKQF---GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQK 115 (229)
T ss_dssp SEEEEEES--CHH----HHHHHHHT---TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHH
T ss_pred CEEEEECC--hHH----HHHHHHHc---CCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHH
Confidence 47777774 222 23333333 355555542 234456778888876 5799999999996 58899999
Q ss_pred HHHHHHHh
Q 019818 177 LESQIHAV 184 (335)
Q Consensus 177 l~~~~~~~ 184 (335)
+++.+.+.
T Consensus 116 l~~~~~~~ 123 (229)
T 1qwj_A 116 VAEMIREE 123 (229)
T ss_dssp HHHHHHSS
T ss_pred HHHHHHhC
Confidence 99888653
No 24
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=92.70 E-value=0.089 Score=46.26 Aligned_cols=109 Identities=16% Similarity=0.067 Sum_probs=68.7
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHH-HHHHHHHHcCCCcEEEEEcCCCCCh
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKR-VAFDFVRKYTVDNVRIILLGRNHGK 144 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~-~~~~~~~~~~~~~i~vi~~~~~~Gk 144 (335)
..+||||-+|+..+.|. .+++... .-..--||+||=++..+...+ ....+... ...++++..+.|.
T Consensus 28 ~~FTvvi~ty~R~~~L~----~lv~~~~-----~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~--~vpv~v~~~~~ns-- 94 (293)
T 1omz_A 28 DSFTLIMQTYNRTDLLL----RLLNHYQ-----AVPSLHKVIVVWNNVGEKGPEELWNSLGPH--PIPVIFKPQTANK-- 94 (293)
T ss_dssp TCEEEEEEESSCHHHHH----HHHHHHT-----TSTTEEEEEEEECCTTCCCTHHHHHHTCCC--SSCEEEEECSSCC--
T ss_pred CceEEEEEeecccHHHH----HHHHHHh-----cCCCCCeEEEEeCCCCCCCChhhccccCCC--CccEEEEeCCCCc--
Confidence 56999999999743333 3333222 244567898888776433332 22222110 1268888776542
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccc
Q 019818 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRK 187 (335)
Q Consensus 145 ~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~ 187 (335)
-.++-.-....++|.|+.+|+|..++.+.|+...+..++.++.
T Consensus 95 LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdR 137 (293)
T 1omz_A 95 MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ 137 (293)
T ss_dssp GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTS
T ss_pred hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccc
Confidence 1111112234578999999999999999999999999887753
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=92.68 E-value=0.98 Score=39.09 Aligned_cols=103 Identities=13% Similarity=0.217 Sum_probs=61.5
Q ss_pred ceEEEEEeccCCCCChH----------HHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEE
Q 019818 66 KYISLIIPAFNEEHRLP----------GALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRI 135 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~----------~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~v 135 (335)
+++.+|||+......++ ..|.-.++.+.. .. --+|+|+.| .+. +++....+ ++.+
T Consensus 17 M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~-----~~-i~~IvV~t~--~~~----i~~~~~~~---g~~v 81 (264)
T 3k8d_A 17 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARE-----SG-AERIIVATD--HED----VARAVEAA---GGEV 81 (264)
T ss_dssp -CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHH-----TT-CSEEEEEES--CHH----HHHHHHHT---TCEE
T ss_pred CceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHh-----CC-CCEEEEECC--HHH----HHHHHHHc---CCEE
Confidence 34778888877766665 123333333332 22 358888775 222 23333343 3455
Q ss_pred EEc--CCCCChHHHHHHHHHhc---CCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 136 ILL--GRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 136 i~~--~~~~Gk~~aln~g~~~a---~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
+.. ....|.+. +..+++.. ..|+++++++|.. ++++.+.++++.+.+.
T Consensus 82 ~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~ 135 (264)
T 3k8d_A 82 CMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQR 135 (264)
T ss_dssp EECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTS
T ss_pred EEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 442 23455544 55566554 5699999999995 5889999999998653
No 26
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=92.39 E-value=1.8 Score=36.88 Aligned_cols=72 Identities=10% Similarity=0.194 Sum_probs=45.9
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEc--CCCCChHHHHHHHHHhc---CCCEEEEEeCCCC-CCcchHHH
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILL--GRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEK 176 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~--~~~~Gk~~aln~g~~~a---~~d~v~~~DaD~~-~~~~~l~~ 176 (335)
.-+|+|+.| .+ .+++....+ ++.++.. ....|.++ +..+++.. ..|.++++++|.. ++++.+.+
T Consensus 42 ~~~ivVv~~--~~----~i~~~~~~~---g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~ 111 (252)
T 3oam_A 42 ADRVIIATD--DE----RVEQAVQAF---GGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQ 111 (252)
T ss_dssp CSEEEEEES--CH----HHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHH
T ss_pred CCeEEEECC--HH----HHHHHHHHc---CCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHH
Confidence 357888775 22 233333333 3444433 23456665 44555554 4699999999994 68999999
Q ss_pred HHHHHHHh
Q 019818 177 LESQIHAV 184 (335)
Q Consensus 177 l~~~~~~~ 184 (335)
+++.+.+.
T Consensus 112 l~~~~~~~ 119 (252)
T 3oam_A 112 VADNLAAC 119 (252)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99998764
No 27
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=92.18 E-value=0.77 Score=39.13 Aligned_cols=99 Identities=17% Similarity=0.225 Sum_probs=61.6
Q ss_pred CceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCc--chHHHHHHHHHHcCCCcEEEEEc--C-
Q 019818 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSD--GTKRVAFDFVRKYTVDNVRIILL--G- 139 (335)
Q Consensus 65 ~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d--~t~~~~~~~~~~~~~~~i~vi~~--~- 139 (335)
.|.|-||-|+|.......+ |..+.+.+.. -+++.-|||+|+..- .+.+++++. ++.+.+. +
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~------Vp~l~WIVVEd~~~~~~~v~~lL~~s-------gl~y~HL~~~~ 67 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQ------VAQLHWILVEDAAARSELVSRFLARA-------GLPSTHLHVPT 67 (246)
T ss_dssp CCCEEEEEEECCSTTHHHH-HHHHHHHHTT------STTEEEEEEESSSSCCHHHHHHHHHS-------CSCEEEEECCC
T ss_pred CCEEEEEeCCCCccchhHH-HHHHHHHHhc------CCceEEEEEcCCCCCCHHHHHHHHHc-------CCceEEEecCC
Confidence 3669999999999655443 5666666653 335888999997543 234555443 2333332 1
Q ss_pred -CC---CC---hHHHHHHHHHhcC---------CCEEEEEeCCCCCCcchHHHH
Q 019818 140 -RN---HG---KGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEKL 177 (335)
Q Consensus 140 -~~---~G---k~~aln~g~~~a~---------~d~v~~~DaD~~~~~~~l~~l 177 (335)
++ .+ -...+|.|++..+ .-+|.|.|+|...+-+..++|
T Consensus 68 ~~~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 68 PRRYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp CCC----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred ccccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 11 11 1367889987642 257788899998887766663
No 28
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=92.10 E-value=1.8 Score=37.17 Aligned_cols=72 Identities=15% Similarity=0.272 Sum_probs=47.1
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEc--CCCCChHHHHHHHHHhc---CCCEEEEEeCCCC-CCcchHHH
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILL--GRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEK 176 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~--~~~~Gk~~aln~g~~~a---~~d~v~~~DaD~~-~~~~~l~~ 176 (335)
--+|+|+.| .+ .+++....+ ++.++.. ....|.+. +..|++.. ..|.++++++|.. ++++.+.+
T Consensus 49 i~~VvVvt~--~~----~i~~~~~~~---g~~v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~ 118 (256)
T 3tqd_A 49 AEEVVIATD--DK----RIRQVAEDF---GAVVCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRK 118 (256)
T ss_dssp CSEEEEEES--CH----HHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHH
T ss_pred CCEEEEECC--HH----HHHHHHHHc---CCeEEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHH
Confidence 457888765 22 233333343 3445443 22355554 66677765 4699999999994 68999999
Q ss_pred HHHHHHHh
Q 019818 177 LESQIHAV 184 (335)
Q Consensus 177 l~~~~~~~ 184 (335)
+++.+.++
T Consensus 119 li~~~~~~ 126 (256)
T 3tqd_A 119 LAEDLDEH 126 (256)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999764
No 29
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=91.35 E-value=2.7 Score=35.28 Aligned_cols=90 Identities=14% Similarity=0.181 Sum_probs=55.0
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-C-CCChHHHHHHHHH
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-R-NHGKGEAIRKGML 153 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~-~~Gk~~aln~g~~ 153 (335)
+....|..+++.+.+ ....-+|+|+.+. +. +.+...++ ++.++..+ + ..|-+++ ..|++
T Consensus 25 ~g~pli~~~i~~~~~---------~~~~~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~~~-~~~~~ 85 (245)
T 1h7e_A 25 VGKPMIQHVYERALQ---------VAGVAEVWVATDD--PR----VEQAVQAF---GGKAIMTRNDHESGTDRL-VEVMH 85 (245)
T ss_dssp TTEEHHHHHHHHHHT---------CTTCCEEEEEESC--HH----HHHHHHHT---TCEEEECCSCCSSHHHHH-HHHHH
T ss_pred CCchHHHHHHHHHHh---------CCCCCeEEEECCc--HH----HHHHHHHc---CCeEEeCCCccCCcHHHH-HHHHH
Confidence 344555555555543 2222578888753 22 23333333 46666653 2 2445444 45666
Q ss_pred hcCCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 154 HSRGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 154 ~a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
....+.++++++|.. ++++.+.++++.+.+.
T Consensus 86 ~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 86 KVEADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp HSCCSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred hCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 667799999999996 5889999999988654
No 30
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=90.85 E-value=0.28 Score=39.90 Aligned_cols=88 Identities=10% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCChHHHHHHHHHh
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLH 154 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~Gk~~aln~g~~~ 154 (335)
+....|..+++.+.+ .. .-+|+|+.+... +.+++....+ ++.++..+ ...|...++..|++.
T Consensus 29 ~g~pll~~~l~~l~~---------~~-~~~i~vv~~~~~----~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~ 91 (197)
T 2wee_A 29 RDTTVLGATLDVARQ---------AG-FDQLILTLGGAA----SAVRAAMALD---GTDVVVVEDVERGCAASLRVALAR 91 (197)
T ss_dssp TTEEHHHHHHHHHHH---------TT-CSEEEEEECTTH----HHHHHHSCCT---TSEEEECC----CCHHHHHHHHTT
T ss_pred CCccHHHHHHHHHHh---------cC-CCcEEEEeCCCH----HHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHH
Confidence 344556666666654 11 347777765322 2223322222 45666544 245888999999988
Q ss_pred c--CCCEEEEEeCCCC-CCcchHHHHHHH
Q 019818 155 S--RGELLLMLDADGA-TKVTDLEKLESQ 180 (335)
Q Consensus 155 a--~~d~v~~~DaD~~-~~~~~l~~l~~~ 180 (335)
. ..+.++++++|.. ++++.+.++++.
T Consensus 92 ~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 92 VHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp SCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred hcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 7 4689999999995 688899998876
No 31
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=90.47 E-value=0.79 Score=37.17 Aligned_cols=70 Identities=13% Similarity=0.252 Sum_probs=47.3
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCChHHHHHHHHHhc--CCCEEEEEeCCCC-CCcchHHHHHH
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHS--RGELLLMLDADGA-TKVTDLEKLES 179 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~Gk~~aln~g~~~a--~~d~v~~~DaD~~-~~~~~l~~l~~ 179 (335)
-+|+|+.+...+ .+++....+ ++.++..+ ...|...++..|++.. ..+.++++++|.. ++++.+.++++
T Consensus 47 ~~i~vv~~~~~~----~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~ 119 (199)
T 2waw_A 47 DQLIVTLGGAAD----EVLEKVELD---GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIA 119 (199)
T ss_dssp SEEEEEECTTHH----HHHHHSCCT---TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CcEEEEeCCCHH----HHHHHhccC---CCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHh
Confidence 478877653222 223332222 35555543 2357778899999887 5699999999997 48888999888
Q ss_pred H
Q 019818 180 Q 180 (335)
Q Consensus 180 ~ 180 (335)
.
T Consensus 120 ~ 120 (199)
T 2waw_A 120 G 120 (199)
T ss_dssp H
T ss_pred h
Confidence 7
No 32
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=89.87 E-value=2.6 Score=39.90 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=69.6
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++|+.|. +.|.-.|+.+.+. ..-+|+||..-..+.-.+.+.+....+. .++.++..++..|-+.|+..
T Consensus 34 l~pv~gk-p~i~~~l~~~~~~----------g~~~i~vv~~~~~~~i~~~~~~~~~~~~-~~i~~~~q~~~lGTa~Av~~ 101 (501)
T 3st8_A 34 LHTLAGR-SMLSHVLHAIAKL----------APQRLIVVLGHDHQRIAPLVGELADTLG-RTIDVALQDRPLGTGHAVLC 101 (501)
T ss_dssp GCEETTE-EHHHHHHHHHHHH----------CCSEEEEEECTTHHHHHHHHHHHHHHHT-SCCEEEECSSCCCHHHHHHH
T ss_pred HeEECCh-hHHHHHHHHHHhC----------CCCEEEEEeCCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCCcHHHHHH
Confidence 6777776 3566666666552 2457888876544444555555444443 26888888888999999999
Q ss_pred HHHhcCC---CEEEEEeCCC-CCCcchHHHHHHHHHHh
Q 019818 151 GMLHSRG---ELLLMLDADG-ATKVTDLEKLESQIHAV 184 (335)
Q Consensus 151 g~~~a~~---d~v~~~DaD~-~~~~~~l~~l~~~~~~~ 184 (335)
++..... +.++++.+|. ....+.+..|++...+.
T Consensus 102 a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~ 139 (501)
T 3st8_A 102 GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAV 139 (501)
T ss_dssp HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHhccccccceeeecCcceeecHHHHHHHHHHHhhc
Confidence 9988753 4677777776 45778888888877654
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=89.48 E-value=2.2 Score=35.52 Aligned_cols=88 Identities=8% Similarity=0.113 Sum_probs=53.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-----CCCChHHHHHHHH
Q 019818 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-----RNHGKGEAIRKGM 152 (335)
Q Consensus 78 ~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-----~~~Gk~~aln~g~ 152 (335)
...|..+++.+.+. ..--+|+|+.+. +.. ++..+.+ ++.++..+ ...|...++..|+
T Consensus 29 kpll~~~l~~~~~~---------~~~~~ivvv~~~--~~i----~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l 90 (228)
T 1ezi_A 29 ISLLGHTINAAISS---------KCFDRIIVSTDG--GLI----AEEAKNF---GVEVVLRPAELASDTASSISGVIHAL 90 (228)
T ss_dssp EEHHHHHHHHHHHH---------CCCSEEEEEESC--HHH----HHHHHHT---TCEEEECCC------CHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhC---------CCCCEEEEECCC--HHH----HHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHH
Confidence 34555666665542 212478888752 222 2333333 34555443 2345677888888
Q ss_pred HhcC--CCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 153 LHSR--GELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 153 ~~a~--~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
+... .|.++++++|.. ++++.+.++++.+.+
T Consensus 91 ~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 91 ETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp HHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred HHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 8773 589999999996 578889998876643
No 34
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=89.39 E-value=5.7 Score=33.92 Aligned_cols=73 Identities=7% Similarity=0.137 Sum_probs=46.6
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEc-CCCCChHHHHHHHHHhc---CCCEEEEEeCCCC-CCcchHHHH
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILL-GRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEKL 177 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~-~~~~Gk~~aln~g~~~a---~~d~v~~~DaD~~-~~~~~l~~l 177 (335)
--+|+|+.|. + .+.+....+ ++.++.. +...+-..++..|++.. ..|+++++++|.. ++++.+.++
T Consensus 42 ~~~vvVvt~~--~----~i~~~~~~~---g~~v~~~~~~~~~Gt~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~l 112 (253)
T 4fcu_A 42 FDDLCVATDD--E----RIAEICRAE---GVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQV 112 (253)
T ss_dssp CCEEEEEESC--H----HHHHHHHTT---TCCEEECCTTCCCHHHHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHH
T ss_pred CCEEEEECCH--H----HHHHHHHHc---CCeEEEeCCCCCChHHHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHH
Confidence 4578888752 2 233333333 3444432 32333224567777765 3599999999994 688999999
Q ss_pred HHHHHHh
Q 019818 178 ESQIHAV 184 (335)
Q Consensus 178 ~~~~~~~ 184 (335)
++.+.+.
T Consensus 113 i~~~~~~ 119 (253)
T 4fcu_A 113 AKLLVDK 119 (253)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999765
No 35
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=88.73 E-value=1.8 Score=35.82 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=57.6
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCChHHHHHHHHHh
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLH 154 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~Gk~~aln~g~~~ 154 (335)
+....|..+++.+.. . +|+||.+. + +..+.+...+ ++.++..+ ...|...++..|++.
T Consensus 24 ~G~pli~~~~~~l~~------------~-~vvvv~~~--~---~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~ 82 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSP------------F-QTVFVCRD--E---KQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRH 82 (208)
T ss_dssp TTEEHHHHHHHHHTT------------S-EEEEECSS--H---HHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHhcC------------C-CEEEEECC--H---HHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHH
Confidence 555556666655533 1 88888742 2 2233443333 34555443 335777999999999
Q ss_pred cCCCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 155 SRGELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 155 a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
+ .+++ ++++|.. ++++.+.++++.+.+
T Consensus 83 ~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 83 F-GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp H-SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred c-CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 9 8999 9999995 589999999998865
No 36
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=88.33 E-value=1.7 Score=36.25 Aligned_cols=92 Identities=12% Similarity=0.057 Sum_probs=57.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
++...|..+++.+.. ....-+|+|+.+...+...+ +. .+....+.++ ++..|...++..|+...
T Consensus 32 ~gkpli~~~l~~l~~---------~~~~~~ivvv~~~~~~~~~~-~~----~~~~~~i~~~--~~~~~~~~si~~~l~~~ 95 (231)
T 1vgw_A 32 GSKTVLEHVLGIFER---------HEAVDLTVVVVSPEDTFADK-VQ----TAFPQVRVWK--NGGQTRAETVRNGVAKL 95 (231)
T ss_dssp TTEEHHHHHHHHHHT---------CTTCCEEEEECCTTCSTHHH-HH----HHCTTSEEEC--CCCSSHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHc---------CCCCCeEEEEECccHHHHHH-HH----hcCCCceEEE--cCCCcHHHHHHHHHHHH
Confidence 444556666665543 22235777776543332222 22 2211146554 34568888888888776
Q ss_pred -------CCCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 156 -------RGELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 156 -------~~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
..+.++++++|.. ++++.+.++++.+.+
T Consensus 96 ~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~ 131 (231)
T 1vgw_A 96 LETGLAAETDNILVHDAARCCLPSEALARLIEQAGN 131 (231)
T ss_dssp HHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTT
T ss_pred hhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhh
Confidence 4699999999985 588889999988754
No 37
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=87.40 E-value=1.5 Score=40.73 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=59.4
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcC
Q 019818 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR 156 (335)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~ 156 (335)
....|..+++.+.+. . --+|+++..... +.+++..... ++.++..+...|.+.++..|++...
T Consensus 35 g~pli~~~l~~l~~~---------~-~~~i~vv~~~~~----~~i~~~~~~~---~~~~v~~~~~~g~~~~i~~~~~~~~ 97 (459)
T 4fce_A 35 GKPMVQHVIDAAMKL---------G-AQHVHLVYGHGG----ELLKKTLADP---SLNWVLQAEQLGTGHAMQQAAPHFA 97 (459)
T ss_dssp TEEHHHHHHHHHHHH---------T-CSCEEEEESSCH----HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSC
T ss_pred CeeHHHHHHHHHHhC---------C-CCcEEEEeCCCH----HHHHHHhccC---CcEEEeCCCCCCcHHHHHHHHHhcC
Confidence 345666666666552 1 346777765332 2223322222 4677776777899999999999886
Q ss_pred C-CEEEEEeCCC-CCCcchHHHHHHHHHH
Q 019818 157 G-ELLLMLDADG-ATKVTDLEKLESQIHA 183 (335)
Q Consensus 157 ~-d~v~~~DaD~-~~~~~~l~~l~~~~~~ 183 (335)
. +.++++++|. .+.++.+.++++.+.+
T Consensus 98 ~~~~~lv~~~D~P~i~~~~i~~l~~~~~~ 126 (459)
T 4fce_A 98 DDEDILMLYGDVPLISVDTLQRLLAAKPE 126 (459)
T ss_dssp TTSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CCCcEEEEeCCcccCCHHHHHHHHHHHhh
Confidence 4 9999999999 4788889999887643
No 38
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=86.99 E-value=5.8 Score=32.86 Aligned_cols=86 Identities=9% Similarity=0.131 Sum_probs=53.3
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC--CCChHHHHHHHHHh
Q 019818 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR--NHGKGEAIRKGMLH 154 (335)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~--~~Gk~~aln~g~~~ 154 (335)
....|..+++.+.+ . --+|+|+.+. + .+.+...++ +.++..++ ..|.++++ .|++.
T Consensus 26 g~pli~~~l~~~~~---------~--~~~i~v~~~~--~----~i~~~~~~~----~~~~~~~~~~~~g~~~~~-~~~~~ 83 (234)
T 2y6p_A 26 GKPLIRWVVEGLVK---------T--GERVILATDS--E----RVKEVVEDL----CEVFLTPSDLPSGSDRVL-YVVRD 83 (234)
T ss_dssp TEEHHHHHHHHHHT---------T--TSCEEEEESC--H----HHHHHHTTT----SEEEECCTTCCSHHHHHH-HHHTT
T ss_pred CEEHHHHHHHHHHH---------h--CCEEEEECCh--H----HHHHHHHhc----eEEEECCcccccchHHHH-HHHHh
Confidence 33556666666544 2 2467777653 2 223332222 23444322 45666655 57777
Q ss_pred cCCCEEEEEeCCC-CCCcchHHHHHHHHHHh
Q 019818 155 SRGELLLMLDADG-ATKVTDLEKLESQIHAV 184 (335)
Q Consensus 155 a~~d~v~~~DaD~-~~~~~~l~~l~~~~~~~ 184 (335)
...|.++++++|. ..+++.+.++++.+.+.
T Consensus 84 ~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 114 (234)
T 2y6p_A 84 LDVDLIINYQGDEPFVYEEDIKLIFRELEKG 114 (234)
T ss_dssp CCCSEEEECCTTCCCCCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEecCCcCcCCHHHHHHHHHHHHhC
Confidence 7789999999999 67889999999988654
No 39
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=86.82 E-value=0.94 Score=39.28 Aligned_cols=53 Identities=19% Similarity=0.135 Sum_probs=43.9
Q ss_pred cEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcc----hHHHHHHHHHHh
Q 019818 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVT----DLEKLESQIHAV 184 (335)
Q Consensus 132 ~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~----~l~~l~~~~~~~ 184 (335)
.+.++..+...|-+.++..|+.....+.++++.+|....++ .+.++++.+.+.
T Consensus 96 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~ 152 (281)
T 3juk_A 96 CFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKY 152 (281)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHH
T ss_pred cEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHc
Confidence 56667666678999999999988877889999999987777 799999988664
No 40
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=86.35 E-value=4.9 Score=35.26 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=61.5
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHH-cCCCcEEEEEcCCCCChHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK-YTVDNVRIILLGRNHGKGEAIR 149 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-~~~~~i~vi~~~~~~Gk~~aln 149 (335)
++|+.+....|..+++.+.+ . --+|+|+.+.. ..+.+.+.... +...++.++..+...|-+.++.
T Consensus 30 ll~i~gg~pli~~~l~~l~~---------~--~~~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~ 95 (308)
T 2qh5_A 30 FLKLFDHKSLFELSFKRNAS---------L--VDETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIA 95 (308)
T ss_dssp GCTTBTTBCHHHHHHHHHHT---------T--CSEEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHc---------c--CCCEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHH
Confidence 45554455666667666654 2 34777766421 22233333333 3211456666666789999999
Q ss_pred HHHHhcC-CCEEEEEeCCCCC-CcchHHHHHHH
Q 019818 150 KGMLHSR-GELLLMLDADGAT-KVTDLEKLESQ 180 (335)
Q Consensus 150 ~g~~~a~-~d~v~~~DaD~~~-~~~~l~~l~~~ 180 (335)
.+..... .++++++.+|... +++.+.++++.
T Consensus 96 ~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 96 LSALMSDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 8888775 4689999999987 67778888876
No 41
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=86.20 E-value=5.4 Score=32.97 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=58.1
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcC
Q 019818 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR 156 (335)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~ 156 (335)
....|..+++.+.+ ...--+|+|+.+.. ..++.+.+...+. .++.++. ...|...++..|++...
T Consensus 31 g~pli~~~l~~l~~---------~~~~~~ivvv~~~~---~~~~~~~~~~~~~-~~v~~~~--~~~~~~~sv~~al~~~~ 95 (228)
T 2yc3_A 31 GQPIALYSFFTFSR---------MPEVKEIVVVCDPF---FRDIFEEYEESID-VDLSFAI--PGKERQDSVYSGLQEID 95 (228)
T ss_dssp TEEHHHHHHHHHHH---------CTTEEEEEEECCGG---GHHHHHTTTTTSS-SEEEEEC--CCSSHHHHHHHHHTTSC
T ss_pred CEEHHHHHHHHHHc---------CCCCCeEEEEEChH---HHHHHHHHHHhCC-CcEEEEC--CCCCHHHHHHHHHHhhc
Confidence 34555556665544 21235777776522 2233333333332 1455543 23688889999998765
Q ss_pred --CCEEEEEeCCC-CCCcchHHHHHHHHHHh
Q 019818 157 --GELLLMLDADG-ATKVTDLEKLESQIHAV 184 (335)
Q Consensus 157 --~d~v~~~DaD~-~~~~~~l~~l~~~~~~~ 184 (335)
.++++++|+|. .++++.+..+++.+.+.
T Consensus 96 ~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~ 126 (228)
T 2yc3_A 96 VNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (228)
T ss_dssp TTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCccCCHHHHHHHHHHHHhc
Confidence 48999999997 56888999999887654
No 42
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=86.12 E-value=1.8 Score=35.52 Aligned_cols=83 Identities=14% Similarity=0.097 Sum_probs=55.4
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-C-CChHHHHHHHHH
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-N-HGKGEAIRKGML 153 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-~-~Gk~~aln~g~~ 153 (335)
+....|..+++.+... .-+|+|+.+... .+ .. .. ++.++..+. . .|...++..|++
T Consensus 31 ~G~pli~~~l~~l~~~-----------~~~ivvv~~~~~---~~-~~----~~---~~~~v~~~~~~~~G~~~si~~~l~ 88 (201)
T 1e5k_A 31 NGKPLWQHVADALMTQ-----------LSHVVVNANRHQ---EI-YQ----AS---GLKVIEDSLADYPGPLAGMLSVMQ 88 (201)
T ss_dssp TTEEHHHHHHHHHHHH-----------CSCEEEECSSSH---HH-HH----TT---SCCEECCCTTCCCSHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHhh-----------CCEEEEEcCCcH---HH-Hh----hc---CCeEEecCCCCCCCHHHHHHHHHH
Confidence 3445666666666531 246777754321 11 11 11 455665542 2 688999999999
Q ss_pred hcCCCEEEEEeCCC-CCCcchHHHHHHH
Q 019818 154 HSRGELLLMLDADG-ATKVTDLEKLESQ 180 (335)
Q Consensus 154 ~a~~d~v~~~DaD~-~~~~~~l~~l~~~ 180 (335)
....++++++++|. .++++.+..+++.
T Consensus 89 ~~~~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 89 QEAGEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp HCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred hCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 98889999999999 4688888888875
No 43
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=85.80 E-value=3 Score=35.79 Aligned_cols=78 Identities=9% Similarity=0.090 Sum_probs=51.6
Q ss_pred ceEEEEEECCCCcchHHHHHHHHH--HcCCCcEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHH
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVR--KYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQ 180 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~--~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~ 180 (335)
--+|+|+.+... ..++.+.+.. .++ .++.++..+...|-+.++..|+.....+.++++.+|.... ..+.++++.
T Consensus 70 ~~~iivv~~~~~--~~~~~~~~~~~~~~~-~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~ 145 (269)
T 4ecm_A 70 ITDIMIITGKEH--MGDVVSFLGSGQEFG-VSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEE 145 (269)
T ss_dssp CCEEEEEECTTT--HHHHHHHHTTSGGGT-CEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHH
T ss_pred CCEEEEECChhh--HHHHHHHHhhccccC-ceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHH
Confidence 457888776422 1222222221 121 2466666666789999999998887788999999999765 678888887
Q ss_pred HHHh
Q 019818 181 IHAV 184 (335)
Q Consensus 181 ~~~~ 184 (335)
+.+.
T Consensus 146 ~~~~ 149 (269)
T 4ecm_A 146 FTNQ 149 (269)
T ss_dssp HHTS
T ss_pred HHhc
Confidence 7653
No 44
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=85.52 E-value=2.1 Score=37.69 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=63.7
Q ss_pred EEecc-CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCC-cchHHHHHHHHHHcC-CCcEEEEEcC--------
Q 019818 71 IIPAF-NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSS-DGTKRVAFDFVRKYT-VDNVRIILLG-------- 139 (335)
Q Consensus 71 iip~~-ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~-~~~i~vi~~~-------- 139 (335)
++|+- +....|..+++.+.+. .--+|+||..... +...+.+. ...+ ..++.++..+
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~----------~~~~i~vv~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~ 91 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRA----------GFGRLVFVIRHSFEKEFREKIL---TKYEGRIPVELVFQELDRLPEGF 91 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHH----------TCCEEEEEECGGGHHHHHHHTH---HHHTTTSCEEEEECCTTCCCTTC
T ss_pred EeEcCCCCeeHHHHHHHHHHHC----------CCCeEEEEcCchHHHHHHHHHH---HHhccCCcEEEEecccccccccc
Confidence 45653 4456777777777652 1357888776332 22222222 2222 1257776655
Q ss_pred -------CCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHH
Q 019818 140 -------RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHA 183 (335)
Q Consensus 140 -------~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~ 183 (335)
+..|-+.|+..+......+ ++++.+|...+++.+..+++...+
T Consensus 92 ~~~~~~~~~~Gt~~al~~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 92 SCPEGREKPWGTNHAVLMGRDAIREP-FAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCCTTCCSCCCHHHHHHTTTTTCCSC-EEEEESSCBCCHHHHHHHHHHHHT
T ss_pred cccccccccCCcHHHHHHHHHhcCCC-EEEEECCeecCHHHHHHHHHHHHH
Confidence 4679999999998887544 566789998888889999988765
No 45
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=85.38 E-value=11 Score=31.78 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=60.2
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcC-CCcEEEEEcCCCCChHHHHHHHHHh
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT-VDNVRIILLGRNHGKGEAIRKGMLH 154 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~-~~~i~vi~~~~~~Gk~~aln~g~~~ 154 (335)
+....|..+++.+.+ ....-+|+||.+... .+.+++..+.+. ...+.++.. ..|...++..|+..
T Consensus 30 ~Gkpll~~~l~~~~~---------~~~~~~ivvv~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~sv~~al~~ 95 (246)
T 3f1c_A 30 NGKPIIVHTVEKFIL---------NTRFDKILISSPKEW---MNHAEDNIKKYISDDRIVVIEG--GEDRNETIMNGIRF 95 (246)
T ss_dssp TTEEHHHHHHHHHHT---------CTTCSEEEEEECGGG---HHHHHHHHHHHCCCTTEEEEEC--CSSHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHHHc---------CCCCCEEEEEeCHHH---HHHHHHHHHHhCCCCCEEEECC--CCchHHHHHHHHHH
Confidence 344666666666654 222457887775322 222333333332 124666543 34677788888876
Q ss_pred cC-------CCEEEEEeCCC-CCCcchHHHHHHHHHHh
Q 019818 155 SR-------GELLLMLDADG-ATKVTDLEKLESQIHAV 184 (335)
Q Consensus 155 a~-------~d~v~~~DaD~-~~~~~~l~~l~~~~~~~ 184 (335)
.. .++|+++|+|. .++++.+.++++.+.+.
T Consensus 96 l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~ 133 (246)
T 3f1c_A 96 VEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALET 133 (246)
T ss_dssp HHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred HhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 53 58999999998 46899999999988764
No 46
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=83.99 E-value=9.4 Score=32.39 Aligned_cols=89 Identities=10% Similarity=0.249 Sum_probs=53.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-C-CCChHHHHHHHHH
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-R-NHGKGEAIRKGML 153 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~-~~Gk~~aln~g~~ 153 (335)
+....|..+++.+.+ ... -+|+|+.+. +. +.+...++ ++.++..+ . ..|.+ .+..++.
T Consensus 25 ~gkpli~~~l~~l~~---------~~~-~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~-~~~~~~~ 84 (262)
T 1vic_A 25 KGKPMIQHVFEKALQ---------SGA-SRVIIATDN--EN----VADVAKSF---GAEVCMTSVNHNSGTE-RLAEVVE 84 (262)
T ss_dssp TTEEHHHHHHHHHHH---------TTC-SEEEEEESC--HH----HHHHHHHT---TCEEEECCCSSCCHHH-HHHHHHH
T ss_pred CCeEHHHHHHHHHHh---------CCC-ceEEEECCc--HH----HHHHHHhc---CCEEEECCccccCChH-HHHHHHH
Confidence 344666666666655 222 578888752 22 23333333 35666553 2 23443 3334443
Q ss_pred hc---CCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 154 HS---RGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 154 ~a---~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
.. ..+.++++++|.. ++++.+.++++.+.+.
T Consensus 85 ~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 119 (262)
T 1vic_A 85 KLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKF 119 (262)
T ss_dssp HTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHH
T ss_pred HhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhc
Confidence 33 4699999999995 6889999999988654
No 47
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=83.96 E-value=8.8 Score=32.18 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=58.9
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
+....|..+++.+.+ ...--+|+|+.+... .+.+++.... .+.++.. ..+...++..|++..
T Consensus 33 ~Gkpll~~~l~~~~~---------~~~~~~ivVv~~~~~---~~~~~~~~~~----~v~~v~g--g~~r~~sv~~gl~~~ 94 (231)
T 3q80_A 33 DGQTLIERAVDGLLD---------SGVVDTVVVAVPADR---TDEARQILGH----RAMIVAG--GSNRTDTVNLALTVL 94 (231)
T ss_dssp TTEEHHHHHHHHHHH---------TSCCCEEEEEECGGG---HHHHHHHHGG----GCEEEEC--CSSHHHHHHHHHGGG
T ss_pred CCeEHHHHHHHHHHh---------CCCCCeEEEECChHH---HHHHHHHhcC----CeEEEcC--CCchHHHHHHHHHHh
Confidence 455666777776655 222357888876322 2233333322 3555542 234677888999887
Q ss_pred C----CCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 156 R----GELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 156 ~----~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
. .+++++.|+|.. ++++.+.++++.+.+
T Consensus 95 ~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 95 SGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp C---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 5 489999999985 589999999998865
No 48
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=83.83 E-value=0.73 Score=37.77 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=38.6
Q ss_pred cEEEEEcCC-CCChHHHHHHHHHhcCC-CEEEEEeCCCC-CCcchHHHHHHHH
Q 019818 132 NVRIILLGR-NHGKGEAIRKGMLHSRG-ELLLMLDADGA-TKVTDLEKLESQI 181 (335)
Q Consensus 132 ~i~vi~~~~-~~Gk~~aln~g~~~a~~-d~v~~~DaD~~-~~~~~l~~l~~~~ 181 (335)
++ ++..+. ..|-..++..|++.... +.++++++|.. ++++.+.++++.+
T Consensus 61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence 45 555443 36888899999998865 89999999995 5888898888765
No 49
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=83.08 E-value=2.4 Score=36.96 Aligned_cols=53 Identities=17% Similarity=0.086 Sum_probs=43.7
Q ss_pred cEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCCCC--cchHHHHHHHHHHh
Q 019818 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATK--VTDLEKLESQIHAV 184 (335)
Q Consensus 132 ~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~--~~~l~~l~~~~~~~ 184 (335)
++.++..+...|-+.++..|......+.++++.+|.... +..+..+++...+.
T Consensus 107 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~ 161 (297)
T 2ux8_A 107 NIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKV 161 (297)
T ss_dssp SEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhc
Confidence 577777666789999999998877678899999999887 68899999887654
No 50
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=82.76 E-value=11 Score=30.84 Aligned_cols=88 Identities=14% Similarity=0.061 Sum_probs=57.4
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc-
Q 019818 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS- 155 (335)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a- 155 (335)
....|..+++.+.+. ...-+|+|+.+... .+.+++... .. ++.++.. ..+...++..|++..
T Consensus 29 g~pli~~~l~~l~~~---------~~~~~i~vv~~~~~---~~~~~~~~~-~~--~v~~~~~--~~~~~~~i~~al~~~~ 91 (223)
T 2xwl_A 29 GTPLLEHALSGLRAS---------GVIDRIVIAVPPAL---TDESKLVFG-GE--DSVIVSG--GVDRTESVALALEAAG 91 (223)
T ss_dssp TEEHHHHHHHHHHHH---------SCCSEEEEEECGGG---HHHHHHHTC-BT--TEEEEEC--CSSHHHHHHHHHTTCT
T ss_pred CeEHHHHHHHHHhcC---------CCCCeEEEEEcccH---HHHHHHHhc-cC--CeEEEcC--CCCHHHHHHHHHHhcC
Confidence 445666677666552 11247777765322 222333221 12 5666553 356788899999888
Q ss_pred CCCEEEEEeCCCC-CCcchHHHHHHHH
Q 019818 156 RGELLLMLDADGA-TKVTDLEKLESQI 181 (335)
Q Consensus 156 ~~d~v~~~DaD~~-~~~~~l~~l~~~~ 181 (335)
..+.++++++|.. ++++.+.++++.+
T Consensus 92 ~~~~vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 92 DAEFVLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp TCSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 6799999999995 6888999999887
No 51
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=82.69 E-value=5.1 Score=33.21 Aligned_cols=95 Identities=11% Similarity=0.090 Sum_probs=56.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcC--C-CcEEEEEcCCCCChHHHHHHHH
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYT--V-DNVRIILLGRNHGKGEAIRKGM 152 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~--~-~~i~vi~~~~~~Gk~~aln~g~ 152 (335)
+....|..+++.+.+ ...--+|+|+.+... .+.+++....++ . .+..+.. ...|...++..|+
T Consensus 29 ~g~pli~~~l~~l~~---------~~~~~~i~vv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~l 94 (236)
T 2vsh_A 29 GDRPILIHTIEKFVL---------EPSIEKIVVGVHGDW---VSHAEDLVDKYLPLYKERIIITK--GGADRNTSIKNII 94 (236)
T ss_dssp TTEEHHHHHHHHHHT---------CTTCCCEEEEECGGG---HHHHHHHHHHHCGGGGGGEEEEE--CCSSHHHHHHHHH
T ss_pred CCccHHHHHHHHHHc---------CCCCCeEEEEeCHHH---HHHHHHHHHhccccccCceEEEC--CCCchHHHHHHHH
Confidence 344566666666544 112347777765332 122333322222 0 0223222 2357788888888
Q ss_pred Hhc----C---CCEEEEEeCCC-CCCcchHHHHHHHHHHh
Q 019818 153 LHS----R---GELLLMLDADG-ATKVTDLEKLESQIHAV 184 (335)
Q Consensus 153 ~~a----~---~d~v~~~DaD~-~~~~~~l~~l~~~~~~~ 184 (335)
... . .++++++++|. .++++.+.++++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2vsh_A 95 EAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNH 134 (236)
T ss_dssp HHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHS
T ss_pred HHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 876 3 48999999999 56888999999988654
No 52
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=82.65 E-value=1.1 Score=39.28 Aligned_cols=112 Identities=14% Similarity=0.049 Sum_probs=63.2
Q ss_pred cCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhhhHhhhhhhhhHHHHHH
Q 019818 155 SRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLEEKALATRKWYRNFLMK 234 (335)
Q Consensus 155 a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~ 234 (335)
...+++++.|+|+.+..+.|.+++..+.. .. .+.+|....... . . .......
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~--~~--------------------~~YiG~~~~~~~--~--~--~~~~~~~ 143 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTFPQ--DR--------------------DVYVGKPSLNRP--I--H--ASELQSK 143 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTSCT--TS--------------------CCEEECEEC------------------
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhCCC--CC--------------------CEEEEEeccCcc--c--c--ccccCcc
Confidence 47899999999999988888888876632 22 566776642110 0 0 0000000
Q ss_pred HHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhh---------hccccchHHHHHHhH-HcCCCEEEeeeEE
Q 019818 235 GFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIR---------LKRWCFDVELVYLCK-RFGIPIIEISVNW 299 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~---------~~~~~~D~el~~r~~-~~G~~i~~~p~~~ 299 (335)
.. .......+...++| .+++|++++++..... ...+.+|..+..-+. ..|.+....+-.+
T Consensus 144 ~~----~~~~~~~y~~GGaG-~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh 213 (280)
T 2j0a_A 144 QR----TKLVRFWFATGGAG-FCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFH 213 (280)
T ss_dssp -----------CCEECGGGC-EEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCC
T ss_pred cc----ccccccCcccCCCE-EEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceeccccc
Confidence 00 00011222223333 5999999999954221 122345999999888 8898877665433
No 53
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=82.55 E-value=3.5 Score=38.19 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcC-
Q 019818 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR- 156 (335)
Q Consensus 78 ~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~- 156 (335)
...|..+++.+.+ .. --+|+++.+... +.+++....+ ++.++..+...|.+.++..|++...
T Consensus 33 kpli~~~l~~l~~---------~~-~~~iivv~~~~~----~~i~~~~~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~ 95 (456)
T 2v0h_A 33 KPMVKHVIDTAHQ---------LG-SENIHLIYGHGG----DLMRTHLANE---QVNWVLQTEQLGTAHAVQQAAPFFKD 95 (456)
T ss_dssp EEHHHHHHHHHHH---------TT-CSCEEEEECTTH----HHHHHHTTTC---CCEEEECSCCCCHHHHHHHHGGGCCT
T ss_pred ccHHHHHHHHHHh---------CC-CCcEEEEeCCCH----HHHHHHhhcC---CcEEEeCCCCCCcHHHHHHHHHhcCC
Confidence 3556666666654 11 346777765321 2233332222 3666666667789999999998875
Q ss_pred CCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 157 GELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 157 ~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
.+.++++++|.. +.++.+.++++.+.+
T Consensus 96 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 96 NENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp TSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred CCeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 699999999995 688888888876643
No 54
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=81.65 E-value=0.79 Score=37.29 Aligned_cols=93 Identities=14% Similarity=0.111 Sum_probs=55.4
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCC-CcEEEEEcCCCCChHHHHHHHHHh
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTV-DNVRIILLGRNHGKGEAIRKGMLH 154 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-~~i~vi~~~~~~Gk~~aln~g~~~ 154 (335)
+....|..+++.+.+ .. --+|+|+.+...+...+.+.+ .++. .++.++.. ...|...++..|++.
T Consensus 25 ~g~pli~~~l~~l~~---------~~-~~~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~-~~~g~~~si~~al~~ 90 (196)
T 3rsb_A 25 CGRCLIDYVVSPLLK---------SK-VNNIFIATSPNTPKTKEYINS---AYKDYKNIVVIDT-SGKGYIEDLNECIGY 90 (196)
T ss_dssp TTEEHHHHHHHHHHS---------SS-CCCEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTT
T ss_pred CCEEHHHHHHHHHHH---------CC-CCEEEEEeCCChHHHHHHHHh---hccCCCCEEEEEC-CCCCcHHHHHHHHHh
Confidence 344566666666654 22 357888775444333333333 2221 14555543 345666677777777
Q ss_pred cCCCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 155 SRGELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 155 a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
. .+.++++++|.. ++++.+.++++.+.+
T Consensus 91 ~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 91 F-SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp C-SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred C-CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 7 899999999995 699999999999875
No 55
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=80.83 E-value=8.8 Score=31.15 Aligned_cols=64 Identities=22% Similarity=0.303 Sum_probs=45.4
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC-CCCChHHHHHHHHHhcCCCEEEEEeCCCCC-CcchHHH-HH
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG-RNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEK-LE 178 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~-~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~-~~~~l~~-l~ 178 (335)
.-+|+|+.+.... +.+. ++.++..+ ...|...++..|++....+.++++++|... +++.+.. ++
T Consensus 54 ~~~i~vv~~~~~~------~~~~------~~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 54 FKEVYIVAKDREK------FSFL------NAPVVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CSEEEEEESCSGG------GGGG------TCCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred CCEEEEEeCcHHH------hhcC------CceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 3578887654332 1111 24555543 457899999999999888999999999964 7887877 76
No 56
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=80.01 E-value=5.7 Score=34.67 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=61.9
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCChHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~~~~~Gk~~a 147 (335)
++|+++. ..|..+++.+... . --+|+||..+... +.+++.... +. .++.++..+...|-+.+
T Consensus 27 llpi~gk-pli~~~l~~l~~~---------g-i~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 91 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLA---------G-IREILIISTPQDT---PRFQQLLGDGSNWG-LDLQYAVQPSPDGLAQA 91 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHT---------T-CCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCGGGH
T ss_pred eCeECCE-eHHHHHHHHHHHC---------C-CCEEEEEeccccH---HHHHHHHhcccccC-ceEEEeeCCCCCCHHHH
Confidence 4566664 7788888777651 1 3578877643222 222333222 22 24556666666788889
Q ss_pred HHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHH
Q 019818 148 IRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHA 183 (335)
Q Consensus 148 ln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~ 183 (335)
+..|......+-++++.+|..+....+.++++.+.+
T Consensus 92 l~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~ 127 (293)
T 1fxo_A 92 FLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQ 127 (293)
T ss_dssp HHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHh
Confidence 888888776566666669987655678888887754
No 57
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=79.89 E-value=3.3 Score=38.58 Aligned_cols=94 Identities=9% Similarity=-0.001 Sum_probs=61.7
Q ss_pred EeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHH
Q 019818 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKG 151 (335)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g 151 (335)
+|.-+ ...|..+++.+.+ . .--+|+++.+.. . +.+++.... ++.++..+...|.+.++..|
T Consensus 34 ~~i~g-kpli~~~l~~l~~---------~-g~~~iivv~~~~---~-~~i~~~~~~----~i~~v~~~~~~G~~~sl~~a 94 (468)
T 1hm9_A 34 HKVAG-ISMLEHVFRSVGA---------I-QPEKTVTVVGHK---A-ELVEEVLAG----QTEFVTQSEQLGTGHAVMMT 94 (468)
T ss_dssp SEETT-EEHHHHHHHHHHT---------T-CCSEEEEEECTT---H-HHHHHSSSS----SSEEEECSSCCCHHHHHHTT
T ss_pred eEECC-ccHHHHHHHHHHh---------c-CCCCEEEEECCC---H-HHHHHHhCC----CcEEEeCCccCChHHHHHHH
Confidence 44433 3566666666544 1 235777776532 1 222222111 35666666667999999999
Q ss_pred HHhcC--CCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 152 MLHSR--GELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 152 ~~~a~--~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
++... .+.++++++|.. +.++.+.++++.+.+.
T Consensus 95 ~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~ 130 (468)
T 1hm9_A 95 EPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINH 130 (468)
T ss_dssp HHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred HHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhc
Confidence 88775 689999999996 6888999999887654
No 58
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=78.04 E-value=1.8 Score=36.34 Aligned_cols=74 Identities=12% Similarity=0.138 Sum_probs=49.1
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcC-CCEEEEEeCCCC-CCcchHHHHHHH
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSR-GELLLMLDADGA-TKVTDLEKLESQ 180 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~-~d~v~~~DaD~~-~~~~~l~~l~~~ 180 (335)
.-+|+|+.+...+...+ + ..++...+.++.. ..|...++..|++... .+.++++++|.. ++++.+.++++.
T Consensus 51 ~~~ivvv~~~~~~~~~~-~----~~~~~~~v~~~~~--~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~ 123 (236)
T 1i52_A 51 VKRVVIAISPGDSRFAQ-L----PLANHPQITVVDG--GDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLAL 123 (236)
T ss_dssp EEEEEEEECTTCCSGGG-S----GGGGCTTEEEEEC--CSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGG
T ss_pred CCeEEEEeCccHHHHHH-H----HhcCCCCEEEECC--CCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHH
Confidence 35777777644333322 2 2222114655542 3588889999998874 699999999985 588889888876
Q ss_pred HHH
Q 019818 181 IHA 183 (335)
Q Consensus 181 ~~~ 183 (335)
+.+
T Consensus 124 ~~~ 126 (236)
T 1i52_A 124 SET 126 (236)
T ss_dssp GGT
T ss_pred HHh
Confidence 643
No 59
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=77.15 E-value=9.8 Score=33.04 Aligned_cols=53 Identities=13% Similarity=0.112 Sum_probs=42.4
Q ss_pred cEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCCCC----cc---hHHHHHHHHHHh
Q 019818 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATK----VT---DLEKLESQIHAV 184 (335)
Q Consensus 132 ~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~----~~---~l~~l~~~~~~~ 184 (335)
++.++..+...|-+.++..|......+.++++.+|.... +. .+.++++...+.
T Consensus 103 ~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~ 162 (302)
T 2e3d_A 103 TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDET 162 (302)
T ss_dssp EEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHH
T ss_pred ceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhc
Confidence 466666666789999999998887667899999999876 45 799999887654
No 60
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=76.81 E-value=5.9 Score=33.03 Aligned_cols=77 Identities=9% Similarity=0.082 Sum_probs=53.8
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
+....|..+++.+.+ .. . +|+|+.+. +... +. - ++.+ +...|.+.++..|++..
T Consensus 30 ~g~pll~~~l~~l~~---------~~-~-~ivvv~~~--~~i~----~~----~--~~~~---~~~~g~~~~i~~a~~~~ 83 (232)
T 2dpw_A 30 RGRPMVEWVLEALYA---------AG-L-SPVYVGEN--PGLV----PA----P--ALTL---PDRGGLLENLEQALEHV 83 (232)
T ss_dssp TTEETHHHHHHHHHH---------TT-C-EEEEESCC--SSCS----SC----C--SEEE---CCCSSHHHHHHHHHHTC
T ss_pred CCEEHHHHHHHHHHh---------cC-C-EEEEEeCh--HHHh----hh----c--CeEe---cCCCCHHHHHHHHHHHc
Confidence 445677777777765 22 2 88887442 2211 11 1 3444 45678999999999888
Q ss_pred CCCEEEEEeCCCC-CCcchHHHHHH
Q 019818 156 RGELLLMLDADGA-TKVTDLEKLES 179 (335)
Q Consensus 156 ~~d~v~~~DaD~~-~~~~~l~~l~~ 179 (335)
. +.++++++|.. ++++.+.++++
T Consensus 84 ~-~~~lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 84 E-GRVLVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp C-SEEEEEETTCTTCCHHHHHHHHH
T ss_pred C-CCEEEEeCCcccCCHHHHHHHHh
Confidence 7 99999999996 68888999887
No 61
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=76.05 E-value=6.6 Score=34.31 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=60.3
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCChHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~~~~~Gk~~a 147 (335)
++|+++. ..|..+++.+... . --+|+||...... +.+++.... +. .++.++..+...|-+.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~---------g-i~~Iivv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLA---------G-IRDILIISTPRDL---PLYRDLLGDGSQFG-VRFSYRVQEEPRGIADA 92 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHT---------T-CCEEEEEECTTTH---HHHHHHHTTSGGGT-SEEEEEECSSCCCGGGH
T ss_pred ecEECCe-eHHHHHHHHHHHC---------C-CCeEEEEeccchH---HHHHHHhhhccccC-ceEEEeeCCCCCChHHH
Confidence 4667664 7788788777651 1 3578887642221 222333222 22 24666666666788888
Q ss_pred HHHHHHhcCC-CEEEEEeCCCCCCcchHHHHHHHHHH
Q 019818 148 IRKGMLHSRG-ELLLMLDADGATKVTDLEKLESQIHA 183 (335)
Q Consensus 148 ln~g~~~a~~-d~v~~~DaD~~~~~~~l~~l~~~~~~ 183 (335)
+..|...... +++++. +|..+....+.++++...+
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (295)
T 1lvw_A 93 FIVGKDFIGDSKVALVL-GDNVFYGHRFSEILRRAAS 128 (295)
T ss_dssp HHHTHHHHTTSCEEEEE-TTCCEECTTHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEEE-CCccccCcCHHHHHHHHHH
Confidence 8888887654 555555 9987644678888887754
No 62
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=74.07 E-value=18 Score=29.74 Aligned_cols=93 Identities=11% Similarity=0.088 Sum_probs=56.2
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
+....|..+++.+.+ ...--+|+|+.+... .+.+++... +. .++... ....+...++..|++.+
T Consensus 39 ~Gkpli~~~i~~l~~---------~~~~~~ivVv~~~~~---~~~~~~~~~-~~-~~~~~~--~gg~~~~~sv~~al~~~ 102 (234)
T 1vpa_A 39 EGRMLFEYPLSTFLK---------SEAIDGVVIVTRREW---FEVVEKRVF-HE-KVLGIV--EGGDTRSQSVRSALEFL 102 (234)
T ss_dssp TTEETTHHHHHHHHH---------CTTCSEEEEEECGGG---HHHHHTTCC-CT-TEEEEE--ECCSSHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHc---------CCCCCeEEEEEChHH---HHHHHHHhc-cC-CceEEe--CCCCcHHHHHHHHHHHh
Confidence 455677777777765 221347888875322 222222211 11 123221 11223677788888776
Q ss_pred ---CCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 156 ---RGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 156 ---~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
..++++++++|.. ++++.+.++++.+.+.
T Consensus 103 ~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~ 135 (234)
T 1vpa_A 103 EKFSPSYVLVHDSARPFLRKKHVSEVLRRARET 135 (234)
T ss_dssp GGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 3689999999995 6889999999887653
No 63
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=72.90 E-value=8.6 Score=33.91 Aligned_cols=53 Identities=9% Similarity=0.086 Sum_probs=41.4
Q ss_pred cEEEEEcCCCCChHHHHHHHHHhcCC--CEEEEEeCCCCCC-cchHHHHHHHHHHh
Q 019818 132 NVRIILLGRNHGKGEAIRKGMLHSRG--ELLLMLDADGATK-VTDLEKLESQIHAV 184 (335)
Q Consensus 132 ~i~vi~~~~~~Gk~~aln~g~~~a~~--d~v~~~DaD~~~~-~~~l~~l~~~~~~~ 184 (335)
++.++..+...|-+.++..|+..... |.++++.+|...+ +..+..+++.+.+.
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~ 161 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEF 161 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTT
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhc
Confidence 46666666678999999999887643 4589999999886 58899999877543
No 64
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=71.99 E-value=11 Score=32.43 Aligned_cols=105 Identities=11% Similarity=-0.016 Sum_probs=58.0
Q ss_pred ceEEEEEeccCC-CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCh
Q 019818 66 KYISLIIPAFNE-EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (335)
Q Consensus 66 ~~vsViip~~ne-~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk 144 (335)
..+.|++.+=+. ...+.-++.|++. . .+..++.++++.++-+++..+.++++.+.++ ..+.++..+...-+
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~---~----~~~~~~~~~il~~~is~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~ 75 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYI---N----NPGRIFDVYLIHSRISEDKLKDLGEDLKKFS-YTLYPIRATDDLFS 75 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHH---H----STTCCEEEEEEESCCCHHHHHHHHHHHHTTT-CEEEEEECC-----
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHH---h----CCCCceEEEEEeCCCCHHHHHHHHHHHHHcC-CEEEEEEeCHHHHh
Confidence 347777665211 2223333344433 1 2334789999999988888888888876554 25666665532111
Q ss_pred H-----------HHHHHHHHhc--CCCEEEEEeCCCCCCcchHHHHHH
Q 019818 145 G-----------EAIRKGMLHS--RGELLLMLDADGATKVTDLEKLES 179 (335)
Q Consensus 145 ~-----------~aln~g~~~a--~~d~v~~~DaD~~~~~~~l~~l~~ 179 (335)
. ...-..-... ..+-++++|+|..+-. .+.+|.+
T Consensus 76 ~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~-di~~L~~ 122 (276)
T 3tzt_A 76 FAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN-PLDDLLR 122 (276)
T ss_dssp --------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS-CSHHHHT
T ss_pred cCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC-CHHHHhh
Confidence 0 0111111122 3589999999998764 4455554
No 65
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=68.09 E-value=5.6 Score=34.78 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=58.6
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEcCCCCChHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILLGRNHGKGEA 147 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~~~~~Gk~~a 147 (335)
++|+++. ..|..+++.+... . --+|+||...... +.+++.... +. .++.++..+...|-+.+
T Consensus 28 llpi~gk-pli~~~l~~l~~~---------g-i~~I~vv~~~~~~---~~i~~~l~~g~~~g-~~i~~~~~~~~~G~~~a 92 (296)
T 1mc3_A 28 LLPIYDK-PMIYYPLSVLMLA---------G-IREILIITTPEDK---GYFQRLLGDGSEFG-IQLEYAEQPSPDGLAQA 92 (296)
T ss_dssp GSEETTE-ETTHHHHHHHHHT---------T-CCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCSTHH
T ss_pred eeEECCe-eHHHHHHHHHHhC---------C-CCcEEEEechhHH---HHHHHHHhcccccC-ceEEEeccCCCCCHHHH
Confidence 4566664 7777777777651 1 3578887642221 222333322 21 24566666666788888
Q ss_pred HHHHHHhcCC-CEEEEEeCCCCCCcchHHHHHHHHHH
Q 019818 148 IRKGMLHSRG-ELLLMLDADGATKVTDLEKLESQIHA 183 (335)
Q Consensus 148 ln~g~~~a~~-d~v~~~DaD~~~~~~~l~~l~~~~~~ 183 (335)
+..|...... +++++. +|..+....+.++++...+
T Consensus 93 l~~a~~~i~~~~~~lv~-gD~~~~~~~l~~~l~~~~~ 128 (296)
T 1mc3_A 93 FIIGETFLNGEPSCLVL-GDNIFFGQGFSPKLRHVAA 128 (296)
T ss_dssp HHHTHHHHTTSCEEEEE-TTEEEECSSCHHHHHHHTT
T ss_pred HHHHHHHhCCCCEEEEE-CCccccccCHHHHHHHHHH
Confidence 8888887654 455555 9987644677788776643
No 66
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=67.75 E-value=3.1 Score=37.89 Aligned_cols=87 Identities=10% Similarity=0.114 Sum_probs=56.0
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
+....+..+++.+.+ ....-+|+|+.+ . .+.+++.. . .+.++. ...|...++..|++..
T Consensus 29 ~GkPLi~~~l~~l~~---------~~~~~~IvVvt~-~----~~~i~~~~---~--~v~~v~--~g~g~~~sv~~aL~~l 87 (371)
T 1w55_A 29 GNDPLWLYATKNLSS---------FYPFKKIVVTSS-N----ITYMKKFT---K--NYEFIE--GGDTRAESLKKALELI 87 (371)
T ss_dssp BTEEHHHHHHHHHHT---------TSCCSCEEEEES-C----HHHHHTTC---S--SSEEEE--CCSSHHHHHHHHHTTC
T ss_pred CCeEHHHHHHHHHHc---------cCCCCeEEEEcC-C----HHHHHHHh---C--CCEEEe--CCCChHHHHHHHHHhc
Confidence 344556666665543 122357888876 2 12222221 1 244552 2356888999999988
Q ss_pred CCCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 156 RGELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 156 ~~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
..|+++++++|.. ++++.+.++++.+.+
T Consensus 88 ~~d~vlv~~~D~Pli~~~~i~~li~~~~~ 116 (371)
T 1w55_A 88 DSEFVMVSDVARVLVSKNLFDRLIENLDK 116 (371)
T ss_dssp CSSEEEEEETTCTTCCHHHHHHHHTTGGG
T ss_pred CCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 7899999999995 588899999877644
No 67
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=65.98 E-value=17 Score=32.35 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=55.6
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++|..++...|..+++.+.+ ....-+|+|+.+. ...+.+.+.....+ ...++..+...|-+.++..
T Consensus 27 ll~l~g~~pli~~~l~~l~~---------~~~~~~iivvt~~---~~~~~i~~~l~~~~--~~~ii~e~~~~gta~ai~~ 92 (336)
T 2x65_A 27 FLKLFGNKSLMRWTFERVLE---------EMDPKDVIVVTHK---DYVERTKKELPELP--DENIIAEPMKKNTAPACFI 92 (336)
T ss_dssp GCCCBTTBCHHHHHHHHHHT---------TCCGGGEEEEEEG---GGHHHHHHHCTTSC--GGGEEEESSCCCHHHHHHH
T ss_pred EEECCCCCcHHHHHHHHHhc---------cCCCCcEEEEcCh---HHHHHHHHHhhccc--cceEEeCCCCCCcHHHHHH
Confidence 45666656667777776654 1122466666642 11222333222222 2234555666888888887
Q ss_pred HHHhcC-CCEEEEEeCCCCCC-cchHHHHHHH
Q 019818 151 GMLHSR-GELLLMLDADGATK-VTDLEKLESQ 180 (335)
Q Consensus 151 g~~~a~-~d~v~~~DaD~~~~-~~~l~~l~~~ 180 (335)
+..... .+.++++.+|.... ++.+..+++.
T Consensus 93 a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~ 124 (336)
T 2x65_A 93 GTKLADDDEPVLVLPADHRIPDTKKFWKTVKK 124 (336)
T ss_dssp HHTTSCTTCEEEEEETTCBCCCHHHHHHHHHH
T ss_pred HHHhhCCCCEEEEEcCCceeccHHHHHHHHHH
Confidence 776543 47899999999764 4555555544
No 68
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=64.32 E-value=71 Score=28.94 Aligned_cols=109 Identities=10% Similarity=0.032 Sum_probs=61.8
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC---CC
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR---NH 142 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~---~~ 142 (335)
.+++.+|-+++.. +.++.+++.+++ +.+.=+|-+|-.+++...+.+.++...++ ++.++.... ..
T Consensus 84 ~kiAflil~h~d~----~~l~rll~~ly~------p~n~y~IHvD~ks~~~~~~~~~~~~~~f~--NV~v~~~~~~v~WG 151 (391)
T 2gak_A 84 FPIAYSIVVHHKI----EMLDRLLRAIYM------PQNFYCIHVDRKAEESFLAAVQGIASCFD--NVFVASQLESVVYA 151 (391)
T ss_dssp SCEEEEEEECSCH----HHHHHHHHHHCC------TTSEEEEEECTTSCHHHHHHHHHHHHTCT--TEEECSSCCCCCTT
T ss_pred CCEEEEEEecCCH----HHHHHHHHHHhC------CCCeEEEEEeCCCCHHHHHHHHHHHhcCC--CEEEeccCcccccC
Confidence 5699999998754 455666665542 22344455666666655555555555567 888874322 22
Q ss_pred C--hHHH----HHHHHHhc-CCCEEEEEeCCCCCCcchHHHHHHHHHHhccc
Q 019818 143 G--KGEA----IRKGMLHS-RGELLLMLDADGATKVTDLEKLESQIHAVGRK 187 (335)
Q Consensus 143 G--k~~a----ln~g~~~a-~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~ 187 (335)
| ...| +..+++.. .-++++.+-+.+.+- .....+.+.|....+.
T Consensus 152 g~S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PL-kt~~~i~~~l~~~~~~ 202 (391)
T 2gak_A 152 SWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPI-KTNLEIVRKLKCSTGE 202 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHCSCCCEEEEEETTCEES-SCHHHHHHHHHHTTTC
T ss_pred CchHHHHHHHHHHHHHhcCCCCCEEEEecCCCccc-cCHHHHHHHHHhcCCC
Confidence 3 2222 33344333 458888887777442 2335666666654333
No 69
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=59.91 E-value=51 Score=27.61 Aligned_cols=50 Identities=10% Similarity=0.132 Sum_probs=37.9
Q ss_pred EEEEEcCCCCChHHHHHHHHHhc---CCCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 133 VRIILLGRNHGKGEAIRKGMLHS---RGELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 133 i~vi~~~~~~Gk~~aln~g~~~a---~~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
+.+... ...|.+..++.|++.+ ..+-++++-+|+. +.++.|.++++.+.+
T Consensus 77 ~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 77 HMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp SEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred cEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 444433 3468999999999876 3578999999995 688889988877643
No 70
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=59.80 E-value=49 Score=30.32 Aligned_cols=99 Identities=17% Similarity=0.170 Sum_probs=59.7
Q ss_pred EeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHc--------CCCcEEEEEcC---C
Q 019818 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKY--------TVDNVRIILLG---R 140 (335)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~--------~~~~i~vi~~~---~ 140 (335)
+|+-+....|..+++.+.+. .--+|+++.+...+...+.+. +.+ ....+.++... .
T Consensus 46 lpi~g~~pli~~~l~~l~~~----------g~~~i~vv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~v~i~~~~~~~~ 112 (451)
T 1yp2_A 46 VPLGANYRLIDIPVSNCLNS----------NISKIYVLTQFNSASLNRHLS---RAYASNMGGYKNEGFVEVLAAQQSPE 112 (451)
T ss_dssp CEETTTEETTHHHHHHHHHT----------TCCEEEEEESCCCHHHHHHHH---HHCC--------CCEEEEEESCSSTT
T ss_pred eEECCcceeHHHHHHHHHHC----------CCCEEEEEeccCHHHHHHHHh---hhhhcccccccccCcEEEeccccccc
Confidence 45544435677777777651 235788877654443333332 222 01125555321 1
Q ss_pred ----CCChHHHHHHHHHhcC---CCEEEEEeCCCCCCcchHHHHHHHHHHh
Q 019818 141 ----NHGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHAV 184 (335)
Q Consensus 141 ----~~Gk~~aln~g~~~a~---~d~v~~~DaD~~~~~~~l~~l~~~~~~~ 184 (335)
..|-+.++..++.... .+.++++.+|...+ ..+.++++...+.
T Consensus 113 ~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~ 162 (451)
T 1yp2_A 113 NPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRET 162 (451)
T ss_dssp SCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHHT
T ss_pred ccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHHc
Confidence 3688899998888764 58999999999654 4588888877543
No 71
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=59.12 E-value=20 Score=32.70 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=58.8
Q ss_pred EeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCC------CcEEEEEcCC----C
Q 019818 72 IPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTV------DNVRIILLGR----N 141 (335)
Q Consensus 72 ip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~------~~i~vi~~~~----~ 141 (335)
+|.-+....|..+++.+.+. .--+|+|+.+...+...+.+.+ .+.. ..+.++.... .
T Consensus 38 lpi~gk~pli~~~l~~l~~~----------gi~~i~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~v~i~~~~~~~~~~ 104 (420)
T 3brk_X 38 VYFGGKARIIDFALSNALNS----------GIRRIGVATQYKAHSLIRHLQR---GWDFFRPERNESFDILPASQRVSET 104 (420)
T ss_dssp SEETTTEETHHHHHHHHHHT----------TCCEEEEEECTTCHHHHHHHHH---HSCCCCGGGTCEEEEECCC------
T ss_pred cccCCCCcHHHHHHHHHHhC----------CCCeEEEEeCCChHHHHHHHhh---hhccccccccCCEEEeCccccccCC
Confidence 44444335777777777651 1357888776443333333322 1221 1355553221 2
Q ss_pred ---CChHHHHHHHHHhcC---CCEEEEEeCCCCCCcchHHHHHHHHHHh
Q 019818 142 ---HGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHAV 184 (335)
Q Consensus 142 ---~Gk~~aln~g~~~a~---~d~v~~~DaD~~~~~~~l~~l~~~~~~~ 184 (335)
.|-+.++..|+.... .+.++++.+|... +..+.++++.+.+.
T Consensus 105 ~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~ 152 (420)
T 3brk_X 105 QWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDS 152 (420)
T ss_dssp -CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHc
Confidence 688889988887654 4889999999954 45678888877553
No 72
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=58.50 E-value=12 Score=31.04 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=44.8
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCC-CChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHH
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN-HGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLES 179 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~-~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~ 179 (335)
-+|+|+. ...+ ++.+.+.+.++ .++.++..+.. .|.+.++..|++....+ ++++.+|...+++.+.++++
T Consensus 60 ~~i~vv~-~~~~---~~~~~~~~~~~-~~~~~v~~~~~~~g~~~~i~~a~~~~~~~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 60 SEFIIVA-SRYA---DDIDAFLKDKG-FNYKIVRHDRPEKGNGYSLLVAKNHVEDR-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp EEEEEEE-STTH---HHHHHHHTTSC-CCEEEEECSCGGGCHHHHHHTTGGGCCSS-EEEEETTEEECHHHHHHHTT
T ss_pred CEEEEEe-CChH---HHHHHHHHhcC-CcEEEEECCCCCCCcHHHHHHHHHHCCCC-EEEEcCCcccCHHHHHHHHh
Confidence 5777776 3332 22233333332 25777775543 68889999999887744 56788998777777776654
No 73
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=57.57 E-value=60 Score=26.89 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHHhc-CCCEEEEEeCCCCCCcchHHHHHHHHHHh
Q 019818 139 GRNHGKGEAIRKGMLHS-RGELLLMLDADGATKVTDLEKLESQIHAV 184 (335)
Q Consensus 139 ~~~~Gk~~aln~g~~~a-~~d~v~~~DaD~~~~~~~l~~l~~~~~~~ 184 (335)
+...|-+.++..+.... ..+.++++.+|.. .+..+..+++...+.
T Consensus 103 ~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~ 148 (259)
T 1tzf_A 103 GDSSMTGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAH 148 (259)
T ss_dssp CSSCCHHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHh
Confidence 34578889999888876 3577888999985 456788888877543
No 74
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=45.54 E-value=77 Score=26.12 Aligned_cols=93 Identities=9% Similarity=0.061 Sum_probs=49.5
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEE-CCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCh
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIID-DGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvd-d~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk 144 (335)
++|.|++. .... ++++++..+.. ...+.||..|- |..+-...+.++ ++ ++-+...+...-+
T Consensus 9 ~ri~vl~S--G~gs----nl~all~~~~~-----~~~~~~I~~Vis~~~~a~~l~~A~----~~---gIp~~~~~~~~~~ 70 (215)
T 3kcq_A 9 LRVGVLIS--GRGS----NLEALAKAFST-----EESSVVISCVISNNAEARGLLIAQ----SY---GIPTFVVKRKPLD 70 (215)
T ss_dssp EEEEEEES--SCCH----HHHHHHHHTCC-----C-CSEEEEEEEESCTTCTHHHHHH----HT---TCCEEECCBTTBC
T ss_pred CEEEEEEE--CCcH----HHHHHHHHHHc-----CCCCcEEEEEEeCCcchHHHHHHH----Hc---CCCEEEeCcccCC
Confidence 34555544 4443 44555543321 33357876544 433323333333 33 4555554332223
Q ss_pred HHHHHHHHHhcCCCEEEEEeCCCCCCcchHHH
Q 019818 145 GEAIRKGMLHSRGELLLMLDADGATKVTDLEK 176 (335)
Q Consensus 145 ~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~ 176 (335)
..++...++...-|++++..---.++++.+..
T Consensus 71 ~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~ 102 (215)
T 3kcq_A 71 IEHISTVLREHDVDLVCLAGFMSILPEKFVTD 102 (215)
T ss_dssp HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHH
T ss_pred hHHHHHHHHHhCCCEEEEeCCceEeCHHHHhh
Confidence 46777778888889888877666777666544
No 75
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=44.51 E-value=22 Score=30.05 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=53.9
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcE-EEEEcCCCCChHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNV-RIILLGRNHGKGEAIR 149 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i-~vi~~~~~~Gk~~aln 149 (335)
++|+.+. ..|..+|+++.+ ....-+|++|.....+ ..+.+++...++....+ .++..+...|-+.|+.
T Consensus 24 llpv~gk-pli~~~l~~l~~---------~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~ 92 (255)
T 4evw_A 24 MLEAHGQ-TLFEHSVNSFAA---------YFASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAELHTETRGQAETVT 92 (255)
T ss_dssp GCEETTE-EHHHHHHGGGGG---------GTTTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHH
T ss_pred ccEECCe-EHHHHHHHHHhc---------cCCCceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHH
Confidence 4555443 566666655543 1123466666543333 44455554344321133 3344455688999999
Q ss_pred HHHHhc------CCCEEEEEeCCCCCCcchHHH
Q 019818 150 KGMLHS------RGELLLMLDADGATKVTDLEK 176 (335)
Q Consensus 150 ~g~~~a------~~d~v~~~DaD~~~~~~~l~~ 176 (335)
.|.... ..+-++++.+|....+..+..
T Consensus 93 ~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 93 LGLEELAKQGVDYQGSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp HHHHHHHHTTCCCCSCEEECCTTEECTTCCCCG
T ss_pred HHHHHHhhcccCCCCcEEEEeCCEEEecchhHH
Confidence 998876 246688999999774444433
No 76
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=42.90 E-value=37 Score=29.56 Aligned_cols=78 Identities=19% Similarity=0.110 Sum_probs=47.8
Q ss_pred CCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCC--------CC---h-HHHHHHHHHh-cCCCEEEEEeCC
Q 019818 100 KSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRN--------HG---K-GEAIRKGMLH-SRGELLLMLDAD 166 (335)
Q Consensus 100 ~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~--------~G---k-~~aln~g~~~-a~~d~v~~~DaD 166 (335)
+..++.+++++|+-+++..+.++++...+. ..+.++..+.. .+ . ....-..-.. ...|-|+++|+|
T Consensus 27 ~~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~ll~~~~kvlyLD~D 105 (311)
T 1g9r_A 27 PDTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDID 105 (311)
T ss_dssp TTSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSS
T ss_pred CCCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHHHhhhcCEEEEEcCC
Confidence 455789999999888888888888866543 25666654321 11 0 0011111111 245889999999
Q ss_pred CCCCcchHHHHHH
Q 019818 167 GATKVTDLEKLES 179 (335)
Q Consensus 167 ~~~~~~~l~~l~~ 179 (335)
..+-.+ +.+|.+
T Consensus 106 ~iv~~d-i~eL~~ 117 (311)
T 1g9r_A 106 VLVRDS-LTPLWD 117 (311)
T ss_dssp EEECSC-CHHHHT
T ss_pred eEeccC-HHHHhc
Confidence 988654 455554
No 77
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=42.82 E-value=35 Score=28.21 Aligned_cols=51 Identities=6% Similarity=0.031 Sum_probs=40.2
Q ss_pred cEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 132 ~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
++.++. ...|...++..|++....+.++++++|.. ++++.+..+++.+.+.
T Consensus 83 ~v~~~~--~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 134 (236)
T 2px7_A 83 GAVFLE--GGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRS 134 (236)
T ss_dssp SCEEEE--CCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHH
T ss_pred CcEEEe--CCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhc
Confidence 455553 23567888999999887899999999974 6889999999887654
No 78
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=40.60 E-value=61 Score=26.15 Aligned_cols=45 Identities=20% Similarity=0.284 Sum_probs=36.7
Q ss_pred cEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCC-CCcchHHHHHH
Q 019818 132 NVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGA-TKVTDLEKLES 179 (335)
Q Consensus 132 ~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~-~~~~~l~~l~~ 179 (335)
++.++..+ .|.+.++..|++.. .+.++++-+|.. ++++.+.++++
T Consensus 66 ~~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 EARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SSEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CCEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 46677665 78899999999877 688999999996 48888888876
No 79
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=39.55 E-value=32 Score=28.91 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=38.9
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC--CCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHH
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR--NHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKL 177 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~--~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l 177 (335)
-+|+|+.+...+...+.+ +.+ ++.++..++ ..|-+.++..++.... + ++++.+|.....+.+..+
T Consensus 72 ~~i~vv~~~~~~~i~~~~----~~~---~~~iv~~~~~~~~g~~~al~~a~~~~~-~-~lv~~~D~~~~~~~~~~~ 138 (254)
T 1jyk_A 72 NDIIIIVGYLKEQFDYLK----EKY---GVRLVFNDKYADYNNFYSLYLVKEELA-N-SYVIDADNYLFKNMFRND 138 (254)
T ss_dssp CCEEEEECTTGGGGTHHH----HHH---CCEEEECTTTTTSCTHHHHHTTGGGCT-T-EEEEETTEEESSCCCCSC
T ss_pred CeEEEEeCCcHHHHHHHH----HhC---CcEEEECCCccCCCcHHHHHHHHHHCC-C-EEEEeCCcccCHHHHHHH
Confidence 467777654334333322 333 366666553 3577778888777663 4 668999997766655443
No 80
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=27.89 E-value=2.2e+02 Score=22.27 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=49.4
Q ss_pred CceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcch--HHHHHHHHHHcCCCcEEEEEcCCCC
Q 019818 65 EKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGT--KRVAFDFVRKYTVDNVRIILLGRNH 142 (335)
Q Consensus 65 ~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t--~~~~~~~~~~~~~~~i~vi~~~~~~ 142 (335)
..++.|+..-.-.+..+.+.++....-+. .+.++|++-|-|...... ....++..++
T Consensus 4 ~Mki~ii~VGk~k~~~~~~~i~eY~kRl~------~~~~~ei~ei~~~k~~~~~s~~~~~~~~~~--------------- 62 (163)
T 4fak_A 4 FMKITILAVGKLKEKYWKQAIAEYEKRLG------PYTKIDIIEVPDEKAPENMSDKEIEQVKEK--------------- 62 (163)
T ss_dssp CCEEEEEEESCCCCHHHHHHHHHHHHHHT------TTCEEEEEEECCCCCCTTCCHHHHHHHHHH---------------
T ss_pred ccEEEEEEecCcCcHHHHHHHHHHHHHcc------CcCCeEEEEecccccccccchhhHHHHHHH---------------
Confidence 35577777666655555555555444332 456677777766543221 0001110000
Q ss_pred ChHHHHHHHHHh-cCCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 143 GKGEAIRKGMLH-SRGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 143 Gk~~aln~g~~~-a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
- + ..-+.. ..+++++.+|-+.. ++...+.+.++.....
T Consensus 63 --E-g-~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~ 102 (163)
T 4fak_A 63 --E-G-QRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQ 102 (163)
T ss_dssp --H-H-HHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHT
T ss_pred --H-H-HHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc
Confidence 0 0 001111 24689999998884 5777777777776543
No 81
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=27.44 E-value=1.6e+02 Score=22.53 Aligned_cols=59 Identities=8% Similarity=0.012 Sum_probs=24.0
Q ss_pred EEECC--CCcchHHHHHHHHHHcCCCcEEEEEcCCC---CChHHHHHHHHHhcCCCEEEEEeCC
Q 019818 108 IIDDG--SSDGTKRVAFDFVRKYTVDNVRIILLGRN---HGKGEAIRKGMLHSRGELLLMLDAD 166 (335)
Q Consensus 108 vvdd~--s~d~t~~~~~~~~~~~~~~~i~vi~~~~~---~Gk~~aln~g~~~a~~d~v~~~DaD 166 (335)
|+||. ..+.....++.+.+.++..++.++..+.. ++|...-..+-.....|.+++++++
T Consensus 39 vi~DyaHnP~si~a~l~al~~~~~~~riivvf~~g~~s~r~k~~~~~~~~~~~~aD~vi~~~~~ 102 (163)
T 3mvn_A 39 VYDDFAHHPTAITATIDALRAKVGQQRILAVLEPRSNTMKMGVHKHELATSLQDADSVFIYQPP 102 (163)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHTTSCEEEEECCC---------CHHHHHHHTTCSEEEEECC-
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEECCCCcchhhHHHHHHHHHHHhcCCEEEEECCC
Confidence 66665 23333444444544455446655543211 1221101111111246778887654
No 82
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=25.84 E-value=1.9e+02 Score=23.58 Aligned_cols=70 Identities=13% Similarity=0.128 Sum_probs=38.2
Q ss_pred CCCceEEEEE-ECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-C-CCh---HHHHHHHHHhcCCCEEEEEeCCCCCCcch
Q 019818 100 KSFTYEVLII-DDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-N-HGK---GEAIRKGMLHSRGELLLMLDADGATKVTD 173 (335)
Q Consensus 100 ~~~~~eiivv-dd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-~-~Gk---~~aln~g~~~a~~d~v~~~DaD~~~~~~~ 173 (335)
...+.||..| .|..+-.-.+.++ ++ ++.++..+. + ..+ ..++...++...-|++++..---.++++.
T Consensus 31 ~~l~~~I~~Visn~~~a~~l~~A~----~~---gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~ 103 (209)
T 4ds3_A 31 PGFPAEIVAVFSDKAEAGGLAKAE----AA---GIATQVFKRKDFASKEAHEDAILAALDVLKPDIICLAGYMRLLSGRF 103 (209)
T ss_dssp TTCSEEEEEEEESCTTCTHHHHHH----HT---TCCEEECCGGGSSSHHHHHHHHHHHHHHHCCSEEEESSCCSCCCHHH
T ss_pred CCCCcEEEEEEECCcccHHHHHHH----Hc---CCCEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEeccccCcCHHH
Confidence 3345777654 4433333333333 33 455554432 2 223 24566677777889888877666777665
Q ss_pred HHH
Q 019818 174 LEK 176 (335)
Q Consensus 174 l~~ 176 (335)
|..
T Consensus 104 l~~ 106 (209)
T 4ds3_A 104 IAP 106 (209)
T ss_dssp HGG
T ss_pred Hhh
Confidence 543
No 83
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=24.03 E-value=96 Score=26.38 Aligned_cols=17 Identities=18% Similarity=0.165 Sum_probs=13.8
Q ss_pred CCCEEEEEeCCCCCCcc
Q 019818 156 RGELLLMLDADGATKVT 172 (335)
Q Consensus 156 ~~d~v~~~DaD~~~~~~ 172 (335)
..|-|+++|+|..+-.+
T Consensus 95 ~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 95 QYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TCSEEEEECTTEEECSC
T ss_pred CcceEEEEcCCEeeccC
Confidence 46999999999987543
No 84
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=23.89 E-value=2e+02 Score=25.28 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=14.1
Q ss_pred cCCCEEEEEeCCCCCCcc
Q 019818 155 SRGELLLMLDADGATKVT 172 (335)
Q Consensus 155 a~~d~v~~~DaD~~~~~~ 172 (335)
...|-|+++|+|..+-.+
T Consensus 93 ~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 93 TQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cCCCeEEEEeCCEEeccC
Confidence 356999999999987543
No 85
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=23.12 E-value=47 Score=29.77 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=50.3
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-CCChHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-NHGKGEAIR 149 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-~~Gk~~aln 149 (335)
++|.-+ ...|..+++.+.+ .. --+|+++.+.. ..+.+.+ ..+ ++.++..++ ..|-..++.
T Consensus 25 ll~i~g-~pli~~~l~~l~~---------~~-~~~i~vv~~~~---i~~~~~~---~~~--~i~~~~~~~~~~g~~~~l~ 85 (401)
T 2ggo_A 25 FVPILS-KPLIEYQIEYLRK---------CG-IRDITVIVSSK---NKEYFEK---KLK--EISIVTQKDDIKGTGAAIL 85 (401)
T ss_dssp GCEETT-EEHHHHHHHHHHH---------TT-CCEEEEEECGG---GHHHHHH---HCT--TCEEEECCTTCCBSTTTGG
T ss_pred eeeECC-EeHHHHHHHHHHH---------CC-CCEEEEEeCHH---HHHHhhc---cCC--cEEEEeCCCCCCChHHHHH
Confidence 344433 3667777777655 11 34777776532 2222222 222 467776654 456555554
Q ss_pred HHHHhcCCCEEEEEeCCCCCC-cchHHHHHH
Q 019818 150 KGMLHSRGELLLMLDADGATK-VTDLEKLES 179 (335)
Q Consensus 150 ~g~~~a~~d~v~~~DaD~~~~-~~~l~~l~~ 179 (335)
.+.+ .+.++++.+|.... ++.+.++++
T Consensus 86 ~~~~---~~~~lv~~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 86 SAKF---NDEALIIYGDLFFSNEKEICNIIT 113 (401)
T ss_dssp GCCC---SSEEEEEETTEEESCSHHHHHHTT
T ss_pred Hhcc---CCCEEEEeCccccccHHHHHHHHH
Confidence 4433 68889999999765 677777665
No 86
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=20.98 E-value=2.6e+02 Score=23.57 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=42.5
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCC-CCCcchHHHHHHHHH
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQIH 182 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~-~~~~~~l~~l~~~~~ 182 (335)
-+|++|++.........+.++.+..+ ..|.++....-.. ..-...+.|.|++.|... .++++.++.+.+..+
T Consensus 5 ~~vLiV~g~~~~~~a~~l~~aL~~~g-~~V~~i~~~~~~~------~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~ 77 (259)
T 3rht_A 5 TRVLYCGDTSLETAAGYLAGLMTSWQ-WEFDYIPSHVGLD------VGELLAKQDLVILSDYPAERMTAQAIDQLVTMVK 77 (259)
T ss_dssp -CEEEEESSCTTTTHHHHHHHHHHTT-CCCEEECTTSCBC------SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHH
T ss_pred ceEEEECCCCchhHHHHHHHHHHhCC-ceEEEeccccccc------ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHH
Confidence 36777765444444444554444433 2566665543221 112345789999988665 467888888888776
Q ss_pred H
Q 019818 183 A 183 (335)
Q Consensus 183 ~ 183 (335)
+
T Consensus 78 ~ 78 (259)
T 3rht_A 78 A 78 (259)
T ss_dssp T
T ss_pred h
Confidence 5
No 87
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=20.64 E-value=3.1e+02 Score=21.46 Aligned_cols=27 Identities=11% Similarity=0.255 Sum_probs=20.4
Q ss_pred CCEEEEEeCCC-CCCcchHHHHHHHHHH
Q 019818 157 GELLLMLDADG-ATKVTDLEKLESQIHA 183 (335)
Q Consensus 157 ~d~v~~~DaD~-~~~~~~l~~l~~~~~~ 183 (335)
+++++.+|-.. .++...+.+.++.+..
T Consensus 70 ~~~vI~LD~~Gk~~sS~~fA~~l~~~~~ 97 (167)
T 1to0_A 70 DAHVIALAIEGKMKTSEELADTIDKLAT 97 (167)
T ss_dssp TSEEEEEEEEEEECCHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 57899998887 4677778777777654
Done!