Query 019818
Match_columns 335
No_of_seqs 201 out of 2882
Neff 9.1
Searched_HMMs 13730
Date Mon Mar 25 07:33:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019818.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019818hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xhba2 c.68.1.17 (A:95-422) P 100.0 9.1E-29 6.6E-33 224.9 17.0 216 63-296 19-244 (328)
2 d1qg8a_ c.68.1.1 (A:) Spore co 99.9 4.6E-25 3.3E-29 192.9 10.5 190 66-296 1-207 (255)
3 d2bo4a1 c.68.1.18 (A:2-382) Ma 99.9 2.1E-21 1.5E-25 176.7 19.3 222 69-327 2-240 (381)
4 d1omza_ c.68.1.15 (A:) Alpha-1 99.8 1.6E-21 1.2E-25 167.6 -1.4 110 66-187 3-112 (265)
5 d1pzta_ c.68.1.2 (A:) beta 1,4 98.1 1.4E-05 1E-09 68.0 11.3 154 63-296 46-205 (271)
6 d1fo8a_ c.68.1.10 (A:) N-acety 97.9 2.5E-05 1.8E-09 68.4 9.3 103 68-182 4-125 (343)
7 d1v82a_ c.68.1.7 (A:) Beta-1,3 93.6 0.28 2E-05 39.9 10.4 97 66-177 2-126 (252)
8 d3cu0a1 c.68.1.7 (A:75-335) 1, 89.6 1 7.4E-05 36.6 9.4 97 67-177 2-133 (261)
9 d1qwja_ c.68.1.13 (A:) CMP acy 88.0 3.4 0.00024 32.0 11.9 101 66-184 2-123 (228)
10 d1fxoa_ c.68.1.6 (A:) RmlA (Rf 86.8 0.9 6.5E-05 37.9 7.7 101 71-187 26-130 (292)
11 d1mc3a_ c.68.1.6 (A:) RffH {Es 78.8 1 7.4E-05 37.5 4.7 98 71-184 26-127 (291)
12 d1h7ea_ c.68.1.13 (A:) CMP:2-k 77.9 13 0.00096 28.7 12.7 77 100-185 40-118 (245)
13 d1g97a2 c.68.1.5 (A:2-251) N-a 71.7 1.1 8.1E-05 35.3 3.0 96 71-185 23-121 (250)
14 d1w77a1 c.68.1.13 (A:75-300) 4 70.2 10 0.00075 29.2 8.8 94 76-184 30-126 (226)
15 d1lvwa_ c.68.1.6 (A:) RmlA (Rf 69.4 6.2 0.00045 32.2 7.5 99 71-184 28-129 (295)
16 d1w55a1 c.68.1.13 (A:3-207) Is 67.7 7.1 0.00051 30.1 7.0 87 76-183 27-114 (205)
17 d1e5ka_ c.68.1.8 (A:) Molybden 64.7 14 0.001 27.1 8.3 43 139-181 71-114 (188)
18 d1vpaa_ c.68.1.13 (A:) 4-dipho 64.1 21 0.0015 27.1 9.5 98 71-185 25-126 (221)
19 d2dpwa1 c.68.1.19 (A:1-231) Un 63.5 7.5 0.00054 30.1 6.6 84 71-182 26-110 (231)
20 d1eyra_ c.68.1.13 (A:) CMP acy 54.3 36 0.0026 25.4 9.2 89 78-184 29-125 (225)
21 d1j6ua2 c.59.1.1 (A:296-446) U 46.0 14 0.001 26.6 5.0 10 156-165 71-80 (151)
22 d1vgwa_ c.68.1.13 (A:) 4-dipho 44.4 29 0.0021 26.3 7.1 93 76-184 29-129 (226)
23 d1to0a_ c.116.1.3 (A:) Hypothe 42.9 50 0.0037 23.7 7.9 81 104-184 3-98 (157)
24 d1i52a_ c.68.1.13 (A:) 4-dipho 41.8 16 0.0012 27.8 5.0 92 77-184 30-123 (225)
25 d1yp2a2 c.68.1.6 (A:10-316) Gl 40.9 77 0.0056 24.8 12.0 99 71-183 36-152 (307)
26 d1ll2a_ c.68.1.14 (A:) Glycoge 39.9 20 0.0015 28.1 5.5 18 155-172 93-110 (263)
27 d1jpdx1 c.1.11.2 (X:114-321) L 38.3 27 0.002 26.4 5.9 72 109-184 12-83 (208)
28 d1vh0a_ c.116.1.3 (A:) Hypothe 38.0 32 0.0023 24.9 5.9 81 104-184 3-98 (157)
29 d2cu2a2 c.68.1.20 (A:1-268) Pu 31.7 46 0.0034 26.1 6.5 86 71-173 28-116 (268)
30 d1wu7a1 c.51.1.1 (A:330-426) H 31.0 61 0.0044 20.9 6.0 60 102-166 4-63 (97)
31 d1o7qa_ c.68.1.9 (A:) alpha-1, 29.8 21 0.0015 28.9 3.8 95 67-171 47-151 (287)
32 d1vica_ c.68.1.13 (A:) CMP:2-k 29.7 1.1E+02 0.0077 23.0 13.0 30 156-185 89-119 (255)
33 d1wmaa1 c.2.1.2 (A:2-276) Carb 27.2 36 0.0026 26.8 5.0 59 69-139 30-88 (275)
34 d1uz5a3 c.57.1.2 (A:181-328) M 26.8 30 0.0022 24.7 4.0 39 104-144 67-105 (148)
35 d1pvma3 g.41.13.1 (A:143-178) 26.5 4.4 0.00032 20.9 -0.7 15 67-81 8-22 (36)
36 d1kmma1 c.51.1.1 (A:326-424) H 24.5 32 0.0023 22.4 3.5 60 104-166 6-65 (99)
37 d1mo6a1 c.37.1.11 (A:1-269) Re 23.5 1E+02 0.0073 24.3 7.1 51 127-177 56-108 (269)
38 d1ns5a_ c.116.1.3 (A:) Hypothe 22.5 1.2E+02 0.0088 21.3 12.0 82 103-184 2-94 (153)
39 d1jdpa_ c.93.1.1 (A:) Hormone 22.2 1.7E+02 0.013 23.0 10.4 74 64-139 6-89 (401)
40 d2oi6a2 c.68.1.5 (A:4-251) N-a 21.4 71 0.0052 23.8 5.7 90 71-178 24-115 (248)
41 d1lzia_ c.68.1.9 (A:) Glycosyl 21.2 69 0.0051 25.6 5.4 96 66-172 52-157 (283)
No 1
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.96 E-value=9.1e-29 Score=224.90 Aligned_cols=216 Identities=20% Similarity=0.164 Sum_probs=143.5
Q ss_pred CCCceEEEEEeccCCC-CChHHHHHHHHHHHHHhhhcCCCC--ceEEEEEECCCCcchH-HHHHHHHHHcCCCcEEEEEc
Q 019818 63 PAEKYISLIIPAFNEE-HRLPGALDETLNYLQQRAAKDKSF--TYEVLIIDDGSSDGTK-RVAFDFVRKYTVDNVRIILL 138 (335)
Q Consensus 63 ~~~~~vsViip~~ne~-~~l~~~l~sl~~~~~~~~~~~~~~--~~eiivvdd~s~d~t~-~~~~~~~~~~~~~~i~vi~~ 138 (335)
...|.||||||+|||+ ..|.+||+|+++ |+++ ..|||||||||+|+|. +.+++..++.+. ++++++.
T Consensus 19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~--------qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~-~i~vi~~ 89 (328)
T d1xhba2 19 DNLPTTSVVIVFHNEAWSTLLRTVHSVIN--------RSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKV-PVHVIRM 89 (328)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHH--------SSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSS-CEEEEEC
T ss_pred CCCCCEEEEEeccCCcHHHHHHHHHHHHh--------cCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCC-CeEEEEe
Confidence 4568899999999997 568999999988 3433 3699999999999975 566666665542 7999999
Q ss_pred CCCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhh
Q 019818 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLE 218 (335)
Q Consensus 139 ~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~ 218 (335)
++|.|.+.|+|.|++.|+||+|+++|+|+.++|++|+.+++.+.+.+...++.+.......++.+..+.....+....
T Consensus 90 ~~n~G~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~-- 167 (328)
T d1xhba2 90 EQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNW-- 167 (328)
T ss_dssp SSCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECT--
T ss_pred cccccchHHHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccc--
Confidence 999999999999999999999999999999999999999999988654332111111111111111111111111000
Q ss_pred hHhhhhhhhhHHHHHHHHHHHHHHHh----CCCCccCCCceeeeeHHHHHHhhhhhh-hccc-cchHHHHHHhHHcCCCE
Q 019818 219 EKALATRKWYRNFLMKGFHLVVILTA----GPGIRDTQCGFKMFTRAAARKLFTNIR-LKRW-CFDVELVYLCKRFGIPI 292 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~~~-~~D~el~~r~~~~G~~i 292 (335)
................... ........|++.+++|++++++++..+ ...+ +||.||++|+..+|+++
T Consensus 168 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i 240 (328)
T d1xhba2 168 -------KLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTL 240 (328)
T ss_dssp -------TCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEE
T ss_pred -------cccccccccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeE
Confidence 0000000000000111111 112233456677899999999943322 2222 58999999999999999
Q ss_pred EEee
Q 019818 293 IEIS 296 (335)
Q Consensus 293 ~~~p 296 (335)
.++|
T Consensus 241 ~~~p 244 (328)
T d1xhba2 241 EIVT 244 (328)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9999
No 2
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=99.91 E-value=4.6e-25 Score=192.86 Aligned_cols=190 Identities=15% Similarity=0.168 Sum_probs=135.5
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC------
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG------ 139 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~------ 139 (335)
|+||||||+||+++.|.+||+|+++ |+++++|||||||||+|+|.++++++.+. + +++++..+
T Consensus 1 P~vSiiip~yN~~~~l~~~l~Si~~--------Qt~~~~eiivvdd~S~d~t~~~l~~~~~~-~--~i~~~~~~~~~~~~ 69 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSDYVAKSISSILS--------QTFSDFELFIMDDNSNEETLNVIRPFLND-N--RVRFYQSDISGVKE 69 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHT--------CSCCCEEEEEEECSCCHHHHHHHGGGGGS-T--TEEEEECCCCSHHH
T ss_pred CEEEEEEecCCCHHHHHHHHHHHHh--------CCCCCeEEEEEECCCCccHHHHHHHhhhh-c--cccccccccccccc
Confidence 6799999999999999999999987 68889999999999999999999988654 3 68888865
Q ss_pred --CCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchh-
Q 019818 140 --RNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAH- 216 (335)
Q Consensus 140 --~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~- 216 (335)
++.|.++|+|.|++.|+||+|+++|+|+.++|++|+.+++.+.++++. +++.|....
T Consensus 70 ~~~~~g~~~a~N~gi~~a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~--------------------~~v~~~~~~~ 129 (255)
T d1qg8a_ 70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEK--------------------AVIYSASKTY 129 (255)
T ss_dssp HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTC--------------------CEEEEEEEEE
T ss_pred ccccchhcccccccccccccccccccccccccccchHHHHHHHHHhCCCC--------------------CeEeecceee
Confidence 578999999999999999999999999999999999999999887654 344432211
Q ss_pred h-hhHhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhh---h----hccccchHHHHHHhHHc
Q 019818 217 L-EEKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNI---R----LKRWCFDVELVYLCKRF 288 (335)
Q Consensus 217 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~---~----~~~~~~D~el~~r~~~~ 288 (335)
. .+............ .......... ..++..++++++++++.... . .....+|.+++.|+..
T Consensus 130 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~~- 199 (255)
T d1qg8a_ 130 HLNENRDIVKETVRPA--------AQVTWNAPCA-IDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH- 199 (255)
T ss_dssp EEC---CEEEEEEECC--------CSCBSCCTTT-SCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-
T ss_pred eeCCCCcEeeeecccc--------hhhhhhhccc-ccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHHc-
Confidence 1 10000000000000 0001111111 22334589999999983221 1 1222459999999865
Q ss_pred CCCEEEee
Q 019818 289 GIPIIEIS 296 (335)
Q Consensus 289 G~~i~~~p 296 (335)
++++.+++
T Consensus 200 ~~~~~~i~ 207 (255)
T d1qg8a_ 200 FYPFYPLD 207 (255)
T ss_dssp TCCBEEEE
T ss_pred CCCEEEec
Confidence 66888776
No 3
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=99.87 E-value=2.1e-21 Score=176.70 Aligned_cols=222 Identities=18% Similarity=0.097 Sum_probs=140.6
Q ss_pred EEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHH---cCCCcEEEEEc----CCC
Q 019818 69 SLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK---YTVDNVRIILL----GRN 141 (335)
Q Consensus 69 sViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~---~~~~~i~vi~~----~~~ 141 (335)
-||||+|||+. .++..+...... .+...||+|+||+|+|.|.++.+...+. .+ ..+..... ..+
T Consensus 2 lVVIP~~NEe~---~il~~~v~~~a~-----~P~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~-~~v~~~~~~~l~~~~ 72 (381)
T d2bo4a1 2 LVVFPFKHEHP---EVLLHNVRVAAA-----HPRVHEVLCIGYERDQTYEAVERAAPEISRATG-TPVSVRLQERLGTLR 72 (381)
T ss_dssp EEEEECCSSCH---HHHHHHHHHHHH-----STTCCEEEEEESSCCHHHHHHHHHHHHHHHHHS-CCEEEEECCCCSSSS
T ss_pred EEEEEcCCCcH---HHHHHHHHHHHh-----CCCeeEEEEEcCCCCCcHHHHHHHhhhhhcccc-ccchhhhhccccccc
Confidence 48999999983 333333333332 2334677777777777666655544332 12 12332222 225
Q ss_pred CChHHH----HHHHHHhcCCCEEEEEeCCC-CCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeee--cc
Q 019818 142 HGKGEA----IRKGMLHSRGELLLMLDADG-ATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFG--SR 214 (335)
Q Consensus 142 ~Gk~~a----ln~g~~~a~~d~v~~~DaD~-~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g--~~ 214 (335)
.||+.+ +..|++.++||+++++|||. ..+|+++.+++..++.+. ++|.| +|
T Consensus 73 ~GKG~g~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~----------------------d~V~g~y~R 130 (381)
T d2bo4a1 73 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGY----------------------GLVRHYFPR 130 (381)
T ss_dssp SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTC----------------------SEEEEECCC
T ss_pred CCCcHHHHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHhhhc----------------------CeEEEeecc
Confidence 677754 55566788999999999998 578999999999985432 77777 44
Q ss_pred hhhhhHhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhh---hccccchHHHHHHhHHcCCC
Q 019818 215 AHLEEKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIR---LKRWCFDVELVYLCKRFGIP 291 (335)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~---~~~~~~D~el~~r~~~~G~~ 291 (335)
.... +...+...+.++ +.+........+.++.||+++|+|++++.++.... ..+|++|.+|+..+.+.|++
T Consensus 131 ~~~~--grvt~~l~~pll----~~l~~~~~~~~i~dPl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~r 204 (381)
T d2bo4a1 131 ASTD--AMITWMITRTGF----ALLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVS 204 (381)
T ss_dssp CTTS--CHHHHHTHHHHH----HHHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCC
T ss_pred ccCC--CceehHhhHHHH----HHHhhhhcccccccCCcccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCe
Confidence 3211 111222222222 22222222345788999999999999999865543 36899999999999999999
Q ss_pred EEEeeeEEEecCCCcccccchHHHHHHHHHHHhhhh
Q 019818 292 IIEISVNWSEIPGSKVNPLSIPNMLWELALMSVGYR 327 (335)
Q Consensus 292 i~~~p~~~~~~~~s~~~~~~~~~~~~~~~~i~~~y~ 327 (335)
|.++|+...+.+.+-........+....+.-.++-.
T Consensus 205 I~EV~i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~ 240 (381)
T d2bo4a1 205 IYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQ 240 (381)
T ss_dssp EEEEECTTCCCCCCSCCGGGGHHHHHHHHHHHHHHT
T ss_pred EEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHheec
Confidence 999998766555544455555555555554444433
No 4
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.6e-21 Score=167.60 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=89.1
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChH
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKG 145 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~ 145 (335)
-++|||||+||+++.|.+||+|+++ |++.+ |+|||||+|+|+|.+.+.+.....+ ..++...+|.|++
T Consensus 3 ~~~tvii~tyn~~~~l~~~l~sl~~--------q~~~~-~~iiV~d~~sd~~~~~i~~~~~~~~---~~~~~~~~~~g~~ 70 (265)
T d1omza_ 3 DSFTLIMQTYNRTDLLLRLLNHYQA--------VPSLH-KVIVVWNNVGEKGPEELWNSLGPHP---IPVIFKPQTANKM 70 (265)
T ss_dssp TCEEEEEEESSCHHHHHHHHHHHTT--------STTEE-EEEEEECCTTCCCTHHHHHHTCCCS---SCEEEEECSSCCG
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHc--------CCCcC-eEEEEECCCCCccHHHHHHHhcccc---eEEEEecCCCCch
Confidence 3599999999999999999999987 56655 5667777777776666555433333 3444455789999
Q ss_pred HHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHhccc
Q 019818 146 EAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAVGRK 187 (335)
Q Consensus 146 ~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~ 187 (335)
.|+|.|++.|+||+|+++|+|+.++|++|+++++.++++++.
T Consensus 71 ~a~n~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~~~ 112 (265)
T d1omza_ 71 RNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ 112 (265)
T ss_dssp GGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTS
T ss_pred hhhhhhHHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999877653
No 5
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.07 E-value=1.4e-05 Score=68.01 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=101.3
Q ss_pred CCCceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCC
Q 019818 63 PAEKYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNH 142 (335)
Q Consensus 63 ~~~~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~ 142 (335)
...-+++||||.+|.++.|...+..+...+.. ....++|+||+...+ ...
T Consensus 46 ~~~~kvaIIIPyRdR~~hL~~fl~~l~~~L~~-----q~~~y~I~vieQ~~~-------------------------~~F 95 (271)
T d1pzta_ 46 ISPHKVAIIIPFRNRQEHLKYWLYYLHPILQR-----QQLDYGIYVINQAGE-------------------------SMF 95 (271)
T ss_dssp BCSCEEEEEEEESSCHHHHHHHHHHHHHHHHH-----TTCEEEEEEEEECSS-------------------------SCC
T ss_pred cccceEEEEEecCChHHHHHHHHHHHHHHHHh-----cCCCEEEEEEeccCC-------------------------cch
Confidence 34568999999999998888888888776664 345799999987432 135
Q ss_pred ChHHHHHHHHHhc----CCCEEEEEeCCCCCCcchHHHHHHHHHHhccccccCCCcccccccccccCCCeeeeecchhhh
Q 019818 143 GKGEAIRKGMLHS----RGELLLMLDADGATKVTDLEKLESQIHAVGRKEYNHGDSVTVDSTFRISDIPIAAFGSRAHLE 218 (335)
Q Consensus 143 Gk~~aln~g~~~a----~~d~v~~~DaD~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~ 218 (335)
.++..+|.|+..| ..+++++-|.|..+..+.... ...+... .+..+....
T Consensus 96 NRg~llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y------~~~~~p~------------------h~~~~~~~~-- 149 (271)
T d1pzta_ 96 NRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTY------RCFSQPR------------------HISVAMDKF-- 149 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCC------SCCSSCE------------------ECCCEEGGG--
T ss_pred hhhhhhhHHHHHhhhccCccEEEEecCCcCcccccccc------cccccCc------------------ceeeecccc--
Confidence 5788899988876 357899999998775553210 0000000 111110000
Q ss_pred hHhhhhhhhhHHHHHHHHHHHHHHHhCCCCccCCCceeeeeHHHHHHhhhhhh-hcccc-chHHHHHHhHHcCCCEEEee
Q 019818 219 EKALATRKWYRNFLMKGFHLVVILTAGPGIRDTQCGFKMFTRAAARKLFTNIR-LKRWC-FDVELVYLCKRFGIPIIEIS 296 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~l~~i~~~~~-~~~~~-~D~el~~r~~~~G~~i~~~p 296 (335)
-.........||..+|+++.++++.+..+ ..+|+ ||-||..|+..+|++|...+
T Consensus 150 ------------------------~~~~~y~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~ 205 (271)
T d1pzta_ 150 ------------------------GFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPN 205 (271)
T ss_dssp ------------------------TTSCSCTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCC
T ss_pred ------------------------ccccccccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccC
Confidence 01122334567888999999999944322 23333 49999999999999998654
No 6
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=97.86 E-value=2.5e-05 Score=68.38 Aligned_cols=103 Identities=14% Similarity=0.135 Sum_probs=71.6
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-------
Q 019818 68 ISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR------- 140 (335)
Q Consensus 68 vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~------- 140 (335)
+-|+|.+||.+ .+.+||+++++... ......|+|..||+.+++.+.+++..+. +..+..+.
T Consensus 4 iPVlv~a~NRP-~l~r~LesLlk~~p------~~~~~~I~Vs~DG~~~~~~~~v~~~~~~-----v~~I~~~~~~~~~~~ 71 (343)
T d1fo8a_ 4 IPILVIACDRS-TVRRCLDKLLHYRP------SAELFPIIVSQDCGHEETAQVIASYGSA-----VTHIRQPDLSNIAVQ 71 (343)
T ss_dssp CCEEEEESSCT-THHHHHHHHHHHCS------CTTTSCEEEEECTTCHHHHHHHHTTGGG-----SEEEECSCCCCCCCC
T ss_pred ccEEEEEcCHH-HHHHHHHHHHhcCc------cccCccEEEEecCCchhHHHHHHHHHHH-----HHHhcCCccccceec
Confidence 67899999997 79999999987411 2345789999999999998888776442 33333321
Q ss_pred --------CCCh----HHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHH
Q 019818 141 --------NHGK----GEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIH 182 (335)
Q Consensus 141 --------~~Gk----~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~ 182 (335)
|.|. ..|++..+..-..+.++++..|..+.|+++.-+.+.+.
T Consensus 72 ~~~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~ 125 (343)
T d1fo8a_ 72 PDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYP 125 (343)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHH
T ss_pred chhhcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHH
Confidence 1121 23344444444569999999999999999965555543
No 7
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.59 E-value=0.28 Score=39.92 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=64.0
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECC--CCcchHHHHHHHHHHcCCCcEEEEEcCCC--
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDG--SSDGTKRVAFDFVRKYTVDNVRIILLGRN-- 141 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~--s~d~t~~~~~~~~~~~~~~~i~vi~~~~~-- 141 (335)
|.|-||-|+|.......+ |..+.+.+.. -+++.-|||+|+ .++.+.+++++. ++.+.+..-.
T Consensus 2 p~I~vVTPTy~R~~Q~~~-LtRLa~TL~l------Vp~l~WIVVEda~~~t~~va~lL~~s-------gl~y~HL~~~~p 67 (252)
T d1v82a_ 2 PTIHVVTPTYSRPVQKAE-LTRMANTLLH------VPNLHWLVVEDAPRRTPLTARLLRDT-------GLNYTHLHVETP 67 (252)
T ss_dssp CEEEEEEEECCSTTHHHH-HHHHHHHHTT------CSSEEEEEEESSSSCCHHHHHHHHHH-------CCEEEEEECCCC
T ss_pred CCEEEECCCCCchhhHHH-HHHHHhHHhc------CCCceEEEEeCCCCCCHHHHHHHHHc-------CCceEeeccCCC
Confidence 679999999999755443 6677776653 357999999874 355567777765 4555554211
Q ss_pred ---------------CChHHHHHHHHHhcC---------CCEEEEEeCCCCCCcchHHHH
Q 019818 142 ---------------HGKGEAIRKGMLHSR---------GELLLMLDADGATKVTDLEKL 177 (335)
Q Consensus 142 ---------------~Gk~~aln~g~~~a~---------~d~v~~~DaD~~~~~~~l~~l 177 (335)
+| ...+|.|+++.+ .-+|.|.|.|...+-+..++|
T Consensus 68 ~~~~~~~~~~~~~~~rg-~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdem 126 (252)
T d1v82a_ 68 RNYKLRGDARDPRIPRG-TMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 126 (252)
T ss_dssp HHHHCCC-----CCCTT-HHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccccccccccc-HHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHH
Confidence 11 246888888652 256667788888886666553
No 8
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.57 E-value=1 Score=36.59 Aligned_cols=97 Identities=14% Similarity=0.122 Sum_probs=61.6
Q ss_pred eEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCC--CcchHHHHHHHHHHcCCCcEEEEEcCC---C
Q 019818 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGS--SDGTKRVAFDFVRKYTVDNVRIILLGR---N 141 (335)
Q Consensus 67 ~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s--~d~t~~~~~~~~~~~~~~~i~vi~~~~---~ 141 (335)
.|-||-|+|-...... -|..+.+.+.. -+++.-|||+|+. ++.+.+++++. ++.+.+..- .
T Consensus 2 TIyvVTPTY~R~~Q~a-~LtRLa~TL~l------Vp~l~WIVVEDa~~~t~~v~~lL~~s-------gl~y~HL~~~tp~ 67 (261)
T d3cu0a1 2 TIYVVTPTYARLVQKA-ELVRLSQTLSL------VPRLHWLLVEDAEGPTPLVSGLLAAS-------GLLFTHLVVLTPK 67 (261)
T ss_dssp EEEEEEEECCSTTHHH-HHHHHHHHHTT------SSSEEEEEEESSSSCCHHHHHHHHHH-------CSEEEEEECCCC-
T ss_pred eEEEECCCCCCchhHH-HHHHHHHHHhc------CCCeeEEEEECCCCCCHHHHHHHHHc-------CCceEEeecCCch
Confidence 4788999999975443 35666666654 3579999998753 34556666654 444444321 0
Q ss_pred ---C---------Ch-HHHHHHHHHhcCC-----------------CEEEEEeCCCCCCcchHHHH
Q 019818 142 ---H---------GK-GEAIRKGMLHSRG-----------------ELLLMLDADGATKVTDLEKL 177 (335)
Q Consensus 142 ---~---------Gk-~~aln~g~~~a~~-----------------d~v~~~DaD~~~~~~~l~~l 177 (335)
. -+ ...+|.|++..+. -+|.|.|.|...+-+..++|
T Consensus 68 ~~~~~~~~~~~~~prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~em 133 (261)
T d3cu0a1 68 AQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 133 (261)
T ss_dssp ----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred hhcccccCcccccccCHHHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHH
Confidence 0 01 1468999988751 46667788888887766663
No 9
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.02 E-value=3.4 Score=32.03 Aligned_cols=101 Identities=18% Similarity=0.181 Sum_probs=63.4
Q ss_pred ceEEEEEeccCCCCChH--------------HHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCC
Q 019818 66 KYISLIIPAFNEEHRLP--------------GALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVD 131 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~--------------~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~ 131 (335)
|+|+.||||+-....++ -+++++..+ ..--+|+|..| ++...+.+...
T Consensus 2 ~ki~aiIpaR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~ks---------~~id~Iivstd--~~~i~~~~~~~------- 63 (228)
T d1qwja_ 2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDA---------GVFQSVWVSTD--HDEIENVAKQF------- 63 (228)
T ss_dssp CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHH---------TCCSEEEEEES--CHHHHHHHHHT-------
T ss_pred CCEEEEeccCCCCCCCCCcchhhhCCeeHHHHHHHHHHhc---------CCcceEEEecc--hhhhhhhhhhc-------
Confidence 67999999987665444 456665542 22356777664 34445444433
Q ss_pred cEEEEEcCC-CC----ChHHHHHHHHHhc-CCCEEEEEeCCCCC-CcchHHHHHHHHHHh
Q 019818 132 NVRIILLGR-NH----GKGEAIRKGMLHS-RGELLLMLDADGAT-KVTDLEKLESQIHAV 184 (335)
Q Consensus 132 ~i~vi~~~~-~~----Gk~~aln~g~~~a-~~d~v~~~DaD~~~-~~~~l~~l~~~~~~~ 184 (335)
++.++..+. .. .....+..++..- ..++++++.+|+.+ .++.+.+++..+.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~ 123 (228)
T d1qwja_ 64 GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREE 123 (228)
T ss_dssp TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSS
T ss_pred CccccccccccccccchhhhhhhhccccccccceeeeecccccccCchhhhhhhhhhhcc
Confidence 355554432 22 2344555555443 46999999999865 888999999988754
No 10
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=86.82 E-value=0.9 Score=37.87 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=68.5
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHH---HHcCCCcEEEEEcCCCCChHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV---RKYTVDNVRIILLGRNHGKGEA 147 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~---~~~~~~~i~vi~~~~~~Gk~~a 147 (335)
++|++|. +.|.-.|+.+.. ..--||++|.+....+ ..+++. .+++ .++.++..+...|-+.|
T Consensus 26 llpi~gk-PiI~~~l~~l~~----------~Gi~ei~ii~~~~~~~---~i~~~~~~~~~~g-~~I~y~~q~~~~Gta~a 90 (292)
T d1fxoa_ 26 LLPVYDK-PMIYYPLSTLML----------AGIREILIISTPQDTP---RFQQLLGDGSNWG-LDLQYAVQPSPDGLAQA 90 (292)
T ss_dssp GSEETTE-ETTHHHHHHHHH----------TTCCEEEEEECTTTHH---HHHHHHTTSGGGT-CEEEEEECSSCCCGGGH
T ss_pred cCEECCE-ehHHHHHHHHHH----------CCCCEEEEEeCcCCHH---HHHHHhccccccC-eEEEEccCCCCCcHHHH
Confidence 5788887 788888888866 2345888887654333 233332 2232 36888888888999999
Q ss_pred HHHHHHhcCCC-EEEEEeCCCCCCcchHHHHHHHHHHhccc
Q 019818 148 IRKGMLHSRGE-LLLMLDADGATKVTDLEKLESQIHAVGRK 187 (335)
Q Consensus 148 ln~g~~~a~~d-~v~~~DaD~~~~~~~l~~l~~~~~~~~~~ 187 (335)
+..+......+ .++++.+|...+ ..+..+++...+....
T Consensus 91 i~~a~~~i~~~~~~lil~dD~~~~-~dl~~ll~~h~~~~~~ 130 (292)
T d1fxoa_ 91 FLIGESFIGNDLSALVLGDNLYYG-HDFHELLGSASQRQTG 130 (292)
T ss_dssp HHHTHHHHTTSEEEEEETTEEEEC-TTHHHHHHHHHTCCSS
T ss_pred HHhhhhhcCCCceEEEEccccccC-cCHHHHHHHHHhCCCC
Confidence 99999988764 566666565444 4478888888765443
No 11
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]}
Probab=78.76 E-value=1 Score=37.50 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=63.0
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHH---HHcCCCcEEEEEcCCCCChHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFV---RKYTVDNVRIILLGRNHGKGEA 147 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~---~~~~~~~i~vi~~~~~~Gk~~a 147 (335)
++|++|. +.|...|+.+.. ..--||++|.+.- ..+..+++. .+++ .++.++..++..|-++|
T Consensus 26 llpi~~k-p~i~~~l~~l~~----------~gi~~i~iv~~~~---~~~~~~~~~~~g~~~g-i~I~y~~Q~~plGta~A 90 (291)
T d1mc3a_ 26 LLPIYDK-PMIYYPLSVLML----------AGIREILIITTPE---DKGYFQRLLGDGSEFG-IQLEYAEQPSPDGLAQA 90 (291)
T ss_dssp GSEETTE-ETTHHHHHHHHH----------TTCCEEEEEECTT---THHHHHHHHTTSGGGT-CEEEEEECSSCCCSTHH
T ss_pred ccEECCE-ehHHHHHHHHHH----------cCCCEEEEEeCcc---cHHHHHHHhCchHhhC-cEEEEEECCCCCchHHH
Confidence 5677776 788888877766 2245887776532 233444442 2332 36888888888999999
Q ss_pred HHHHHHhcCCC-EEEEEeCCCCCCcchHHHHHHHHHHh
Q 019818 148 IRKGMLHSRGE-LLLMLDADGATKVTDLEKLESQIHAV 184 (335)
Q Consensus 148 ln~g~~~a~~d-~v~~~DaD~~~~~~~l~~l~~~~~~~ 184 (335)
+..+-.....+ .++++.+|.....+ +..++....+.
T Consensus 91 i~~a~~fi~~~~~~lvlgddi~~~~~-~~~~l~~~~~~ 127 (291)
T d1mc3a_ 91 FIIGETFLNGEPSCLVLGDNIFFGQG-FSPKLRHVAAR 127 (291)
T ss_dssp HHHTHHHHTTSCEEEEETTEEEECSS-CHHHHHHHTTC
T ss_pred HHHHHHHhCCCCeEEEECCCcccCcC-HHHHHHHHHhC
Confidence 99999888765 55666555555554 45555554433
No 12
>d1h7ea_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Escherichia coli, KpsU [TaxId: 562]}
Probab=77.90 E-value=13 Score=28.68 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=48.0
Q ss_pred CCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEE-cCCCCChHHHHHHHHHhcCCCEEEEEeCCCCC-CcchHHHH
Q 019818 100 KSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIIL-LGRNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEKL 177 (335)
Q Consensus 100 ~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~-~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~-~~~~l~~l 177 (335)
...--+|+|+.|. +.. ......+. +.++. .+...+-......++.....|+++.+++|... +++.+..+
T Consensus 40 ~~~~d~Iiv~td~--~~i----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~l~~~~p~~~~~~i~~~ 110 (245)
T d1h7ea_ 40 VAGVAEVWVATDD--PRV----EQAVQAFG---GKAIMTRNDHESGTDRLVEVMHKVEADIYINLQGDEPMIRPRDVETL 110 (245)
T ss_dssp CTTCCEEEEEESC--HHH----HHHHHHTT---CEEEECCSCCSSHHHHHHHHHHHSCCSEEEECCTTCTTCCHHHHHHH
T ss_pred CCCCCeEEEeccc--ccc----hhhhhhcC---ceEEEecCccccccHHHHHHHHhcCCCEEEEecchhhhcccccchhh
Confidence 3444577776652 222 22333332 33333 33344455667777777889999999999965 66788888
Q ss_pred HHHHHHhc
Q 019818 178 ESQIHAVG 185 (335)
Q Consensus 178 ~~~~~~~~ 185 (335)
+..+....
T Consensus 111 ~~~~~~~~ 118 (245)
T d1h7ea_ 111 LQGMRDDP 118 (245)
T ss_dssp HHHHHHCT
T ss_pred hhcccccc
Confidence 88886654
No 13
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=71.70 E-value=1.1 Score=35.32 Aligned_cols=96 Identities=8% Similarity=0.017 Sum_probs=57.6
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++|+ +...-|+.+++.+.. ...-++++|..... +....... ..+.+.......|...++..
T Consensus 23 L~~i-~Gkpli~~~l~~l~~----------~~~~~iivv~~~~~----~~~~~~~~----~~~~~~~~~~~~g~~~~~~~ 83 (250)
T d1g97a2 23 LHKV-AGISMLEHVFRSVGA----------IQPEKTVTVVGHKA----ELVEEVLA----GQTEFVTQSEQLGTGHAVMM 83 (250)
T ss_dssp GSEE-TTEEHHHHHHHHHGG----------GCCSEEEEEECTTH----HHHHHHTT----TTSEEEECSSCCCHHHHHHT
T ss_pred eeEE-CCeeHHHHHHHHHHH----------cCCCeEEEeccccc----chhhhhcc----ccccccccccccccchHHHH
Confidence 4444 455566666666654 22456666664321 11122211 14555666667788888877
Q ss_pred HHHhcC---CCEEEEEeCCCCCCcchHHHHHHHHHHhc
Q 019818 151 GMLHSR---GELLLMLDADGATKVTDLEKLESQIHAVG 185 (335)
Q Consensus 151 g~~~a~---~d~v~~~DaD~~~~~~~l~~l~~~~~~~~ 185 (335)
+..... .+.+++.++|..+.++.+.++++...+..
T Consensus 84 a~~~l~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~ 121 (250)
T d1g97a2 84 TEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHK 121 (250)
T ss_dssp THHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTT
T ss_pred HHHhhhcccCcceEEecCCCccCHHHHHHHHHHHhhhc
Confidence 766554 35566666677789999999998776653
No 14
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=70.23 E-value=10 Score=29.24 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=55.7
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
|..+.|..+++.+.. ....-+|+|+.+. .-.+.++++...+. ..+.++.. ......+...|+...
T Consensus 30 ~Gkpli~~~l~~~~~---------~~~~~~Iivv~~~---~~~~~~~~~~~~~~-~~~~~~~g--g~~r~~sv~~~l~~~ 94 (226)
T d1w77a1 30 LGQPIALYSFFTFSR---------MPEVKEIVVVCDP---FFRDIFEEYEESID-VDLRFAIP--GKERQDSVYSGLQEI 94 (226)
T ss_dssp TTEEHHHHHHHHHHT---------CTTEEEEEEECCG---GGTHHHHTTTTSCS-SEEEEECC--CSSHHHHHHHHHHTS
T ss_pred CCeeHHHHHHHHHHh---------hccccceeeccch---hhhhhhhccccccc-cccccccc--cchhhhhhhhhHhhh
Confidence 334455566665543 3334667776552 23355555544433 23444331 112455666777765
Q ss_pred --CCCEEEEEeCCCCC-CcchHHHHHHHHHHh
Q 019818 156 --RGELLLMLDADGAT-KVTDLEKLESQIHAV 184 (335)
Q Consensus 156 --~~d~v~~~DaD~~~-~~~~l~~l~~~~~~~ 184 (335)
..++|++.|+|..+ +++.+.+++....+.
T Consensus 95 ~~~~~~Vli~d~~~P~i~~~~i~~l~~~~~~~ 126 (226)
T d1w77a1 95 DVNSELVCIHDSARPLVNTEDVEKVLKDGSAV 126 (226)
T ss_dssp CTTCSEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred ccccccceecccccccccHHHhhhhhhhhhcc
Confidence 46999999999864 788888888887665
No 15
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=69.42 E-value=6.2 Score=32.21 Aligned_cols=99 Identities=11% Similarity=0.095 Sum_probs=60.8
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHH--cCCCcEEEEEcCCCCChHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRK--YTVDNVRIILLGRNHGKGEAI 148 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~~~~~i~vi~~~~~~Gk~~al 148 (335)
++|+.+ ...|..+++.+.. . ..-++++|.+... .+..+++... ....++.++..++..|-+.|+
T Consensus 28 ll~i~~-kpii~~~l~~l~~---------~-g~~~i~Iv~~~~~---~~~~~~~~~~~~~~~~~i~~v~e~~~~gta~Al 93 (295)
T d1lvwa_ 28 LLPIYD-KPMIYYPLSVLML---------A-GIRDILIISTPRD---LPLYRDLLGDGSQFGVRFSYRVQEEPRGIADAF 93 (295)
T ss_dssp GSEETT-EETTHHHHHHHHH---------T-TCCEEEEEECTTT---HHHHHHHHTTSGGGTSEEEEEECSSCCCGGGHH
T ss_pred cCeECC-EEHHHHHHHHHHH---------C-CCCeEEEEeCccc---HHHHHHHhccchhcCCEEEEEECCCCCCHHHHH
Confidence 456655 4788888888765 1 2346777765433 2333343321 112367778888888999999
Q ss_pred HHHHHhcCC-CEEEEEeCCCCCCcchHHHHHHHHHHh
Q 019818 149 RKGMLHSRG-ELLLMLDADGATKVTDLEKLESQIHAV 184 (335)
Q Consensus 149 n~g~~~a~~-d~v~~~DaD~~~~~~~l~~l~~~~~~~ 184 (335)
..+...... ++++++-+|...+ ..+..+.....+.
T Consensus 94 ~~a~~~l~~~~~~li~~~d~~~~-~~~~~~~~~~~~~ 129 (295)
T d1lvwa_ 94 IVGKDFIGDSKVALVLGDNVFYG-HRFSEILRRAASL 129 (295)
T ss_dssp HHTHHHHTTSCEEEEETTCCEEC-TTHHHHHHHHHTC
T ss_pred HHHHHHcCCCCEEEEeCCcceec-hhHHHHHHHHHhC
Confidence 888888765 5666666665444 4555666655554
No 16
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]}
Probab=67.69 E-value=7.1 Score=30.13 Aligned_cols=87 Identities=11% Similarity=0.116 Sum_probs=55.9
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS 155 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a 155 (335)
++...|..+++.+.. ....-+|+|+.+. .+..+++ .. ++.++... .....+...|++..
T Consensus 27 ~gkpii~~~l~~~~~---------~~~~~~Ivvv~~~-----~~~~~~~---~~--~~~~v~Gg--~~r~~Sv~~gl~~~ 85 (205)
T d1w55a1 27 GNDPLWLYATKNLSS---------FYPFKKIVVTSSN-----ITYMKKF---TK--NYEFIEGG--DTRAESLKKALELI 85 (205)
T ss_dssp BTEEHHHHHHHHHHT---------TSCCSCEEEEESC-----HHHHHTT---CS--SSEEEECC--SSHHHHHHHHHTTC
T ss_pred CCEEHHHHHHHHHHh---------hcccccccccccc-----ccccccc---cc--cccccccc--cchhhhhhhhhhhh
Confidence 455666777776654 2334567776542 1222222 11 45555422 23567788899999
Q ss_pred CCCEEEEEeCCCC-CCcchHHHHHHHHHH
Q 019818 156 RGELLLMLDADGA-TKVTDLEKLESQIHA 183 (335)
Q Consensus 156 ~~d~v~~~DaD~~-~~~~~l~~l~~~~~~ 183 (335)
..++|++.|+|.. ++++.+.++++...+
T Consensus 86 ~~~~VlIhd~~rP~i~~~~i~~li~~~~~ 114 (205)
T d1w55a1 86 DSEFVMVSDVARVLVSKNLFDRLIENLDK 114 (205)
T ss_dssp CSSEEEEEETTCTTCCHHHHHHHHTTGGG
T ss_pred hhcceeeeccCcccCcHHHHHHHHhhhhc
Confidence 9999999999985 588888888876644
No 17
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]}
Probab=64.65 E-value=14 Score=27.13 Aligned_cols=43 Identities=19% Similarity=0.141 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHHHhcCCCEEEEEeCCCCC-CcchHHHHHHHH
Q 019818 139 GRNHGKGEAIRKGMLHSRGELLLMLDADGAT-KVTDLEKLESQI 181 (335)
Q Consensus 139 ~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~-~~~~l~~l~~~~ 181 (335)
+...|-..++..++....++.++++.+|... +++.+..|++..
T Consensus 71 ~~~~~~~~g~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~L~~~~ 114 (188)
T d1e5ka_ 71 ADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQR 114 (188)
T ss_dssp TCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHTC
T ss_pred ccccchhHHHHHHHHhcccceEEEeccCCCCCCHHHHHHHHHhc
Confidence 3456677788888888999999999999965 888888877654
No 18
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]}
Probab=64.11 E-value=21 Score=27.08 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=59.6
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++++ +..+.|..+++++.. ....-+|+|+.+ +...+..++.. .....+.++... .+...+...
T Consensus 25 l~~i-~gkpli~~~i~~~~~---------~~~~~~Iivv~~---~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~s~~~ 87 (221)
T d1vpaa_ 25 FLEI-EGRMLFEYPLSTFLK---------SEAIDGVVIVTR---REWFEVVEKRV--FHEKVLGIVEGG--DTRSQSVRS 87 (221)
T ss_dssp GCEE-TTEETTHHHHHHHHH---------CTTCSEEEEEEC---GGGHHHHHTTC--CCTTEEEEEECC--SSHHHHHHH
T ss_pred eeEE-CCEEHHHHHHHHHHh---------ccccccceEEec---chhhhHHHhhh--cccccccccccc--ccccchHHH
Confidence 3455 456788888888876 333467777764 23333332221 111245555533 334444444
Q ss_pred HHHhc---CCCEEEEEeCCCCC-CcchHHHHHHHHHHhc
Q 019818 151 GMLHS---RGELLLMLDADGAT-KVTDLEKLESQIHAVG 185 (335)
Q Consensus 151 g~~~a---~~d~v~~~DaD~~~-~~~~l~~l~~~~~~~~ 185 (335)
|+... ..++++++|+|..+ +++.+..++..+.+..
T Consensus 88 ~~~~~~~~~~~~v~~~~~d~p~~~~~~i~~li~~~~~~~ 126 (221)
T d1vpaa_ 88 ALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG 126 (221)
T ss_dssp HHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCCcEEEeccccccccHHHHHhhhhhhcccc
Confidence 55443 56999999999865 8888999999887653
No 19
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]}
Probab=63.50 E-value=7.5 Score=30.12 Aligned_cols=84 Identities=11% Similarity=0.052 Sum_probs=55.0
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++|+ +....|..+++.+.+. ..-+|+++.+..... ..........|...++..
T Consensus 26 L~~i-~Gkpli~~~~~~l~~~----------~~~~vvv~~~~~~~~----------------~~~~~~~~~~~~~~~v~~ 78 (231)
T d2dpwa1 26 LVPY-RGRPMVEWVLEALYAA----------GLSPVYVGENPGLVP----------------APALTLPDRGGLLENLEQ 78 (231)
T ss_dssp GSEE-TTEETHHHHHHHHHHT----------TCEEEEESCCSSCSS----------------CCSEEECCCSSHHHHHHH
T ss_pred eeEE-CCeeHHHHHHHHHHhc----------CCCeEEeeeeccccc----------------eeeeecccchHHHHHHHH
Confidence 3444 5567888888877652 234555554422211 111223345788888999
Q ss_pred HHHhcCCCEEEEEeCCCC-CCcchHHHHHHHHH
Q 019818 151 GMLHSRGELLLMLDADGA-TKVTDLEKLESQIH 182 (335)
Q Consensus 151 g~~~a~~d~v~~~DaD~~-~~~~~l~~l~~~~~ 182 (335)
|++... +.++++.+|.. ++++.+..+++.+.
T Consensus 79 al~~~~-~~~lv~~~D~P~i~~~~i~~l~~~~~ 110 (231)
T d2dpwa1 79 ALEHVE-GRVLVATGDIPHLTEEAVRFVLDKAP 110 (231)
T ss_dssp HHHTCC-SEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred HHHhhc-CceEEeeCCCccCCHHHHHHHHHHhh
Confidence 999875 67888999994 58999999988663
No 20
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]}
Probab=54.31 E-value=36 Score=25.38 Aligned_cols=89 Identities=8% Similarity=0.097 Sum_probs=53.3
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCC-----CCChHHHHHHHH
Q 019818 78 EHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGR-----NHGKGEAIRKGM 152 (335)
Q Consensus 78 ~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~-----~~Gk~~aln~g~ 152 (335)
...+..+++.+..+ ..--+|+|..| ++...++ +..++ +.++..+. ..+.......++
T Consensus 29 kpLi~~~i~~~~~s---------~~~~~Iiv~td--~~~i~~i----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (225)
T d1eyra_ 29 ISLLGHTINAAISS---------KCFDRIIVSTD--GGLIAEE----AKNFG---VEVVLRPAELASDTASSISGVIHAL 90 (225)
T ss_dssp EEHHHHHHHHHHHH---------TCCSEEEEEES--CHHHHHH----HHHTT---CEEEECCHHHHSTTCCHHHHHHHHH
T ss_pred eEHHHHHHHHHHHc---------CCCceEEEeec--cchhhhh----hhhhc---ceeeeeccccccccccchhhccccc
Confidence 34444677777663 22347888765 3333443 34443 34444432 223334455555
Q ss_pred Hh--cCCCEEEEEeCCCCC-CcchHHHHHHHHHHh
Q 019818 153 LH--SRGELLLMLDADGAT-KVTDLEKLESQIHAV 184 (335)
Q Consensus 153 ~~--a~~d~v~~~DaD~~~-~~~~l~~l~~~~~~~ 184 (335)
+. ...|+|+.+.+|+.+ +++.+.+++..+.+.
T Consensus 91 ~~~~~~~d~ii~~~~~~P~~~~~~I~~~i~~~~~~ 125 (225)
T d1eyra_ 91 ETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEK 125 (225)
T ss_dssp HHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTT
T ss_pred cccccccceEEEeeccccccccccccccceeeccc
Confidence 54 356999999999975 788899999888654
No 21
>d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=46.03 E-value=14 Score=26.58 Aligned_cols=10 Identities=0% Similarity=0.165 Sum_probs=6.3
Q ss_pred CCCEEEEEeC
Q 019818 156 RGELLLMLDA 165 (335)
Q Consensus 156 ~~d~v~~~Da 165 (335)
..|.++++|.
T Consensus 71 ~aD~vilt~~ 80 (151)
T d1j6ua2 71 LADEVVVTEV 80 (151)
T ss_dssp TSSEEEECCC
T ss_pred cccceeeecc
Confidence 4577777653
No 22
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]}
Probab=44.36 E-value=29 Score=26.33 Aligned_cols=93 Identities=16% Similarity=0.202 Sum_probs=50.6
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHh-
Q 019818 76 NEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLH- 154 (335)
Q Consensus 76 ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~- 154 (335)
+..+.|..+++.+.+ ....-+|+||.+ ..+.-.+ .....++ .+..+... ..........|+..
T Consensus 29 ~gkpli~~~i~~~~~---------~~~~~~iivv~~-~~~~~~~---~~~~~~~--~~~~~~~g-~~~~~~s~~~~l~~~ 92 (226)
T d1vgwa_ 29 GSKTVLEHVLGIFER---------HEAVDLTVVVVS-PEDTFAD---KVQTAFP--QVRVWKNG-GQTRAETVRNGVAKL 92 (226)
T ss_dssp TTEEHHHHHHHHHHT---------CTTCCEEEEECC-TTCSTHH---HHHHHCT--TSEEECCC-CSSHHHHHHHHHHHH
T ss_pred CCEEHHHHHHHHHHh---------CCCccccceecc-hhhhhhh---hhccccc--ceeecccc-ccccchhhhHHHHHH
Confidence 444566666666654 233345666654 3333333 3333444 33333322 12233334444332
Q ss_pred ------cCCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 155 ------SRGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 155 ------a~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
...+++++.|+|.. ++++.+.+++..+...
T Consensus 93 ~~~~~~~~~~~v~~~~~~~P~i~~~~i~~~i~~~~~~ 129 (226)
T d1vgwa_ 93 LETGLAAETDNILVHDAARCCLPSEALARLIEQAGNA 129 (226)
T ss_dssp HHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred HHhcccccccceeecccccccCcHHHHHHHHhhhccc
Confidence 24699999999975 4778898988887554
No 23
>d1to0a_ c.116.1.3 (A:) Hypothetical protein YydA {Bacillus subtilis [TaxId: 1423]}
Probab=42.93 E-value=50 Score=23.66 Aligned_cols=81 Identities=12% Similarity=0.244 Sum_probs=48.8
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCC-CcEEEEEcCCCCChHH----HH-----HHH---HHh-cCCCEEEEEeCCCC-
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTV-DNVRIILLGRNHGKGE----AI-----RKG---MLH-SRGELLLMLDADGA- 168 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~-~~i~vi~~~~~~Gk~~----al-----n~g---~~~-a~~d~v~~~DaD~~- 168 (335)
++|+.|..-..+.-.+.++++.++.+. .++.++..+....... .. ..+ +.. ..+++++.+|-...
T Consensus 3 I~Ii~iGk~k~~~~~~~~~~Y~kRl~~~~~~~~iei~~~k~~~~~~~~~~~~~~~~E~~~il~~i~~~~~~I~LDe~Gk~ 82 (157)
T d1to0a_ 3 INIVTIGKLKEKYLKQGIEEYTKRLSAYAKIDIIELPDEKAPENLSDQDMKIIKDKEGDRILSKISPDAHVIALAIEGKM 82 (157)
T ss_dssp EEEEEESCCCCHHHHHHHHHHHHHHTTTSEEEEEEECCCCC---------CHHHHHHHHHHHTTSCTTSEEEEEEEEEEE
T ss_pred EEEEEecCcCCHHHHHHHHHHHHHcCcccCeeEEEecCcccccccchhHHHHHHHHHHHHHHhhcCCCCeEEEeccchhh
Confidence 567777665556667777777777653 2566666653222110 00 111 222 25799999998884
Q ss_pred CCcchHHHHHHHHHHh
Q 019818 169 TKVTDLEKLESQIHAV 184 (335)
Q Consensus 169 ~~~~~l~~l~~~~~~~ 184 (335)
++...+.++++.....
T Consensus 83 ~sS~~fA~~l~~~~~~ 98 (157)
T d1to0a_ 83 KTSEELADTIDKLATY 98 (157)
T ss_dssp CCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHhc
Confidence 6777888888777653
No 24
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]}
Probab=41.80 E-value=16 Score=27.80 Aligned_cols=92 Identities=14% Similarity=0.151 Sum_probs=52.6
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhc-
Q 019818 77 EEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHS- 155 (335)
Q Consensus 77 e~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a- 155 (335)
+.+.|..+++++.+ ....-+|+||.+.....- .+.....++ .+.+.... .+...+...|+...
T Consensus 30 gkplI~~~i~~~~~---------~~~i~~Iivv~~~~~~~~---~~~~~~~~~--~v~~~~~~--~~~~~sv~~~~~~~~ 93 (225)
T d1i52a_ 30 NQTILEHSVHALLA---------HPRVKRVVIAISPGDSRF---AQLPLANHP--QITVVDGG--DERADSVLAGLKAAG 93 (225)
T ss_dssp TEEHHHHHHHHHHT---------STTEEEEEEEECTTCCSG---GGSGGGGCT--TEEEEECC--SSHHHHHHHHHHTST
T ss_pred CEEHHHHHHHHHHh---------Cccccccccccchhhhhh---hhhhhcccc--ccccccCC--cchhHHHHhhhcccC
Confidence 33555666666544 233456666665333222 222233333 55555543 34455666666666
Q ss_pred CCCEEEEEeCCCC-CCcchHHHHHHHHHHh
Q 019818 156 RGELLLMLDADGA-TKVTDLEKLESQIHAV 184 (335)
Q Consensus 156 ~~d~v~~~DaD~~-~~~~~l~~l~~~~~~~ 184 (335)
..++|++.|+|.. .+++.+.++...+..+
T Consensus 94 ~~~~vl~~~~~~p~i~~~~~~~~~~~~~~~ 123 (225)
T d1i52a_ 94 DAQWVLVHDAARPCLHQDDLARLLALSETS 123 (225)
T ss_dssp TCSEEEECCTTCTTCCHHHHHHHHGGGGTC
T ss_pred ccceeeeeccCCCCCCHHHHHHHHhhhhhc
Confidence 5799999999975 4677777777766544
No 25
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=40.87 E-value=77 Score=24.77 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=57.2
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCC-------CcEEEEEc-CC--
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTV-------DNVRIILL-GR-- 140 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-------~~i~vi~~-~~-- 140 (335)
++|+-+....|..+|+.+.+ ..--||+|+..-..+...+ .+...++. ..+..+.. ..
T Consensus 36 llpv~g~~plI~~~l~~l~~----------~gi~~I~Iv~~~~~~~i~~---~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 102 (307)
T d1yp2a2 36 AVPLGANYRLIDIPVSNCLN----------SNISKIYVLTQFNSASLNR---HLSRAYASNMGGYKNEGFVEVLAAQQSP 102 (307)
T ss_dssp GCEETTTEETTHHHHHHHHH----------TTCCEEEEEESCCCHHHHH---HHHHHCC--------CCEEEEEESCSST
T ss_pred eEEECCCCCHHHHHHHHHHH----------cCCCEEEEEeccccccchh---hhhcccccccccccccccceeeceeeec
Confidence 44554444678888888866 2346888887654443333 33332221 12222222 11
Q ss_pred -----CCChHHHHHHHHHhcC---CCEEEEEeCCCCCCcchHHHHHHHHHH
Q 019818 141 -----NHGKGEAIRKGMLHSR---GELLLMLDADGATKVTDLEKLESQIHA 183 (335)
Q Consensus 141 -----~~Gk~~aln~g~~~a~---~d~v~~~DaD~~~~~~~l~~l~~~~~~ 183 (335)
..|-+.++..+..... .+.++++++|.....+. ..++.....
T Consensus 103 ~~~~~~~g~~~ai~~~~~~i~~~~~~~~iv~~~D~~~~~d~-~~~~~~~~~ 152 (307)
T d1yp2a2 103 ENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDY-EKFIQAHRE 152 (307)
T ss_dssp TSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCH-HHHHHHHHH
T ss_pred cccccccchhHHHHHhHHhhhccccceEEEecCcceeccch-hhhhhhhhh
Confidence 2477788877776553 47789999999888765 455554443
No 26
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=39.87 E-value=20 Score=28.12 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=14.4
Q ss_pred cCCCEEEEEeCCCCCCcc
Q 019818 155 SRGELLLMLDADGATKVT 172 (335)
Q Consensus 155 a~~d~v~~~DaD~~~~~~ 172 (335)
...|-|+.+|+|..+-.+
T Consensus 93 ~~ydkvlYLDaD~lv~~~ 110 (263)
T d1ll2a_ 93 TQYSKCVFMDADTLVLAN 110 (263)
T ss_dssp TTCSEEEEECTTEEECSC
T ss_pred cccceEEEeCCCEEEecC
Confidence 356999999999987543
No 27
>d1jpdx1 c.1.11.2 (X:114-321) L-Ala-D/L-Glu epimerase {Escherichia coli [TaxId: 562]}
Probab=38.33 E-value=27 Score=26.42 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=46.1
Q ss_pred EECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCCCCCCcchHHHHHHHHHHh
Q 019818 109 IDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDADGATKVTDLEKLESQIHAV 184 (335)
Q Consensus 109 vdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD~~~~~~~l~~l~~~~~~~ 184 (335)
|.=|+.++..+.++++.++ +...+++- .. .......-.+++.+-+|.-+.+|++..++++...++.+.+++.
T Consensus 12 v~~~tpe~~~~~a~~~~~~-G~~~~KiK-vg--~~~d~~~i~~ir~~~~d~~l~vDaN~~~s~~~A~~~~~~l~~~ 83 (208)
T d1jpdx1 12 VVIGTPDQMANSASTLWQA-GAKLLKVK-LD--NHLISERMVAIRTAVPDATLIVDANESWRAEGLAARCQLLADL 83 (208)
T ss_dssp ECSCCHHHHHHHHHHHHHT-TCSEEEEE-CC--SSCHHHHHHHHHHHCTTSEEEEECTTCCCSTTHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHHHC-CCCEEEEE-CC--CCcHHHHHHHHHHhccccEEEEecccccchhHHHHHHHHHHhc
Confidence 3444666666767766554 11134432 11 2234444555666667888999999999999888889888764
No 28
>d1vh0a_ c.116.1.3 (A:) Hypothetical protein SAV0024/SA0023 {Staphylococcus aureus [TaxId: 1280]}
Probab=38.03 E-value=32 Score=24.86 Aligned_cols=81 Identities=11% Similarity=0.144 Sum_probs=47.2
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCC-CcEEEEEcCCCCC----hHHHHH-----H---HHHh-cCCCEEEEEeCCCC-
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTV-DNVRIILLGRNHG----KGEAIR-----K---GMLH-SRGELLLMLDADGA- 168 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~-~~i~vi~~~~~~G----k~~aln-----~---g~~~-a~~d~v~~~DaD~~- 168 (335)
++|+.|-.-..+.-.+.++++.++.+. .++.++..+...+ ...... . -++. ..+++++.+|-...
T Consensus 3 I~Ii~iGk~k~~~~~~~i~~Y~kRl~~~~~i~~~ei~~~k~~~~~~~~~~~~~~~~E~~~il~~i~~~~~~I~LDe~Gk~ 82 (157)
T d1vh0a_ 3 ITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKM 82 (157)
T ss_dssp EEEEEESCCCCHHHHHHHHHHHHHHGGGSEEEEEEECCCCCCSSCCHHHHHHHHHHHHHHHHHTSCTTSEEEEEEEEEEC
T ss_pred EEEEEecCcCCHHHHHHHHHHHHHcCcccCceEEEcccccCccccchhhHHHHHHHHHHHHHHhcCCCCeEEEEeccccc
Confidence 566666665555556666766666542 2566666543221 111111 1 1112 24799999999884
Q ss_pred CCcchHHHHHHHHHHh
Q 019818 169 TKVTDLEKLESQIHAV 184 (335)
Q Consensus 169 ~~~~~l~~l~~~~~~~ 184 (335)
++...+.+.+......
T Consensus 83 ~sS~~fA~~i~~~~~~ 98 (157)
T d1vh0a_ 83 LSSEGLAQELNQRMTQ 98 (157)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHhh
Confidence 6777888888776554
No 29
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]}
Probab=31.73 E-value=46 Score=26.14 Aligned_cols=86 Identities=21% Similarity=0.282 Sum_probs=49.4
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++|..++...|+.+++++.. -...-+++++.+.. .+.+. +... ..++++..+...|-+.|...
T Consensus 28 ll~i~g~k~ll~~~i~rl~~---------~~~~~~i~i~~~~~----~~~~~---~~~~-~~~~ii~E~~~~~t~~a~~~ 90 (268)
T d2cu2a2 28 FLPLFEGKTLLEATLERLAP---------LVPPERTLLAVRRD----QEAVA---RPYA-DGIRLLLEPLGRDTAGAVLL 90 (268)
T ss_dssp GCBCGGGCBHHHHHHHHHTT---------TSCGGGEEEEEEGG----GHHHH---GGGC-SSSEEEEESSCCHHHHHHHH
T ss_pred eeecCCCCCHHHHHHHHhhC---------cCCccchhhhhhHH----HHHHh---hhhc-cccceeeeeecCCcccchhh
Confidence 56777666667777766543 12223455544321 11222 2222 24566666666777777666
Q ss_pred HHHhc---CCCEEEEEeCCCCCCcch
Q 019818 151 GMLHS---RGELLLMLDADGATKVTD 173 (335)
Q Consensus 151 g~~~a---~~d~v~~~DaD~~~~~~~ 173 (335)
++... ..|.++++.+|.....+.
T Consensus 91 ~~~~~~~~~~~~vlvl~~D~~~~~~~ 116 (268)
T d2cu2a2 91 GVAEALKEGAERLLVLPADHYVGDDE 116 (268)
T ss_dssp HHHHHHHHTCSEEEEEESSCEESCHH
T ss_pred HHHHHhccCCceeEEEecchhhcccH
Confidence 65443 468899999999776554
No 30
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=30.97 E-value=61 Score=20.87 Aligned_cols=60 Identities=3% Similarity=0.032 Sum_probs=36.8
Q ss_pred CceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCC
Q 019818 102 FTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDAD 166 (335)
Q Consensus 102 ~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD 166 (335)
.+.-|+.+++.......+++.++... ++++.....+...+..+..|-. ....+++++..|
T Consensus 4 ~~V~i~~~g~~~~~~~~~l~~~Lr~~----gi~v~~d~~~~~l~kq~~~A~~-~~~~~~iiiG~~ 63 (97)
T d1wu7a1 4 KSVYICRVGKINSSIMNEYSRKLRER----GMNVTVEIMERGLSAQLKYASA-IGADFAVIFGER 63 (97)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHHTT----TCEEEECCSCCCHHHHHHHHHH-TTCSEEEEEEHH
T ss_pred ceEEEEEeCHHHHHHHHHHHHHHHHC----CCEEEEECCCCcHHHHHHHHHh-cCCCeEEecCCc
Confidence 34566667777777777777777554 5666554444444444444333 456888888654
No 31
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.83 E-value=21 Score=28.89 Aligned_cols=95 Identities=13% Similarity=0.125 Sum_probs=52.1
Q ss_pred eEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCC-hH
Q 019818 67 YISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHG-KG 145 (335)
Q Consensus 67 ~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~G-k~ 145 (335)
+|.+.+-|-+. .+...++..+++..+-+ .+..+...+|-.|+..+-... ...+..++.++...+..+ ..
T Consensus 47 tIgl~vfAtgk--Y~~~Fl~~FleSaEk~F--m~g~~v~yyVFTD~~~~~P~i------~l~~~r~~~v~~v~~~~~Wp~ 116 (287)
T d1o7qa_ 47 TVGLTVFAVGR--YIEHYLEEFLTSANKHF--MVGHPVIFYIMVDDVSRMPLI------ELGPLRSFKVFKIKPEKRWQD 116 (287)
T ss_dssp CEEEEEEECTT--HHHHHHHHHHHHHHHHB--STTSCEEEEEEESCGGGCCCC------CCCTTEEEEEEECCCCSSHHH
T ss_pred eEEEEEEEeCh--hHHHHHHHHHHHHHHhc--CCCCeEEEEEEECCcccCCcc------ccCCccceEEEEccccCCCch
Confidence 45555555554 44456666666666544 466677778887764321100 111222677777654444 21
Q ss_pred ------HHHHHHHHh---cCCCEEEEEeCCCCCCc
Q 019818 146 ------EAIRKGMLH---SRGELLLMLDADGATKV 171 (335)
Q Consensus 146 ------~aln~g~~~---a~~d~v~~~DaD~~~~~ 171 (335)
..++..+.. ...||++++|+|..+..
T Consensus 117 iTL~Rm~~i~~~i~~~~~~e~Dylf~~DaDm~f~~ 151 (287)
T d1o7qa_ 117 ISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQD 151 (287)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECS
T ss_pred hHHHHHHHHHHHHHHhhhccCCeEEEEeCCceEec
Confidence 222222221 24699999999987644
No 32
>d1vica_ c.68.1.13 (A:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase {Haemophilus influenzae [TaxId: 727]}
Probab=29.66 E-value=1.1e+02 Score=23.01 Aligned_cols=30 Identities=7% Similarity=0.209 Sum_probs=23.3
Q ss_pred CCCEEEEEeCCCCC-CcchHHHHHHHHHHhc
Q 019818 156 RGELLLMLDADGAT-KVTDLEKLESQIHAVG 185 (335)
Q Consensus 156 ~~d~v~~~DaD~~~-~~~~l~~l~~~~~~~~ 185 (335)
..++++.+.+|... ++..+..++..+....
T Consensus 89 ~~~~iv~~~~d~p~~~~~~i~~~i~~~~~~~ 119 (255)
T d1vica_ 89 DNEIIVNIQGDEPLIPPVIVRQVADNLAKFN 119 (255)
T ss_dssp TTCEEEECCTTCTTCCHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecchhhhhhhhhhhhhhhccccc
Confidence 45899999999965 6677888888877654
No 33
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.17 E-value=36 Score=26.76 Aligned_cols=59 Identities=7% Similarity=0.122 Sum_probs=39.0
Q ss_pred EEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcC
Q 019818 69 SLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLG 139 (335)
Q Consensus 69 sViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~ 139 (335)
.|++..+|+++ +++..+.+.. ...+.+.+.+|=.+.+...+.++++.++++ ++.++.+.
T Consensus 30 ~Vi~~~r~~~~-~~~~~~~l~~---------~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g--~iDiLVnN 88 (275)
T d1wmaa1 30 DVVLTARDVTR-GQAAVQQLQA---------EGLSPRFHQLDIDDLQSIRALRDFLRKEYG--GLDVLVNN 88 (275)
T ss_dssp EEEEEESSHHH-HHHHHHHHHH---------TTCCCEEEECCTTCHHHHHHHHHHHHHHHS--SEEEEEEC
T ss_pred EEEEEECCHHH-HHHHHHHHHh---------cCCcEEEEEEecCCHHHHHHHHHHHHHhcC--CcEEEEEc
Confidence 57788888753 4444444433 345677777776666666777788888887 78777664
No 34
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=26.81 E-value=30 Score=24.69 Aligned_cols=39 Identities=26% Similarity=0.443 Sum_probs=16.7
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCCh
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGK 144 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk 144 (335)
.+++|+.-|+..+..+...+..++.. .+.+....-++|+
T Consensus 67 ~DliIttGG~s~g~~D~~~~~l~~~g--~~~~~~v~i~PG~ 105 (148)
T d1uz5a3 67 GDVVVISGGASGGTKDLTASVIEELG--EVKVHGIAIQPGK 105 (148)
T ss_dssp CSEEEEECCC-----CHHHHHHHHHS--EEEEECBSEESCT
T ss_pred ccEEEECCCcccchhhHHHHHHHHcC--chhhhhhHHHhcC
Confidence 56777776665554444444444433 3434333334454
No 35
>d1pvma3 g.41.13.1 (A:143-178) Hypothetical protein Ta0289 C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=26.49 E-value=4.4 Score=20.89 Aligned_cols=15 Identities=20% Similarity=0.547 Sum_probs=12.0
Q ss_pred eEEEEEeccCCCCCh
Q 019818 67 YISLIIPAFNEEHRL 81 (335)
Q Consensus 67 ~vsViip~~ne~~~l 81 (335)
.|.|+.|+||+...|
T Consensus 8 gvgvl~pvy~~kgei 22 (36)
T d1pvma3 8 GVGVLEPVYNEKGEI 22 (36)
T ss_dssp SSSBEEEEECTTSCE
T ss_pred CceEEEEeecCCCcE
Confidence 378899999997655
No 36
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.47 E-value=32 Score=22.42 Aligned_cols=60 Identities=5% Similarity=0.043 Sum_probs=30.1
Q ss_pred eEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHHHHHhcCCCEEEEEeCC
Q 019818 104 YEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRKGMLHSRGELLLMLDAD 166 (335)
Q Consensus 104 ~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~g~~~a~~d~v~~~DaD 166 (335)
+-|+.++++......++++++.+..+ ++++.....+...+..+..|- ....++++++..+
T Consensus 6 v~vi~~~~~~~~~a~~la~~LR~~~~--gi~v~~~~~~~~l~kq~k~A~-~~~~~~~iiiG~~ 65 (99)
T d1kmma1 6 IYLVASGADTQSAAMALAERLRDELP--GVKLMTNHGGGNFKKQFARAD-KWGARVAVVLGES 65 (99)
T ss_dssp EEEECCSTTHHHHHHHHHHHHHHHST--TCCEEECCSCCCHHHHHHHHH-HHTCSEEEECCHH
T ss_pred EEEEECCHHHHHHHHHHHHHHHhcCC--CeEEEEeCCCCCHHHHHHHHH-HhCCChhhhcCch
Confidence 33444444444555667777766555 455544433333333333332 2356777777543
No 37
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.53 E-value=1e+02 Score=24.25 Aligned_cols=51 Identities=20% Similarity=0.171 Sum_probs=36.8
Q ss_pred HcCCCcEEEEEcCCCCChHHHHHHHHHhc--CCCEEEEEeCCCCCCcchHHHH
Q 019818 127 KYTVDNVRIILLGRNHGKGEAIRKGMLHS--RGELLLMLDADGATKVTDLEKL 177 (335)
Q Consensus 127 ~~~~~~i~vi~~~~~~Gk~~aln~g~~~a--~~d~v~~~DaD~~~~~~~l~~l 177 (335)
-.|..+++.+.-++..||..-.-.....+ .+-.++++|....+++++++++
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~ 108 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKL 108 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHh
Confidence 34555788888888899886533333333 5788999999999998876654
No 38
>d1ns5a_ c.116.1.3 (A:) Hypothetical protein YbeA {Escherichia coli [TaxId: 562]}
Probab=22.49 E-value=1.2e+02 Score=21.27 Aligned_cols=82 Identities=10% Similarity=0.148 Sum_probs=51.3
Q ss_pred ceEEEEEECCCCcchHHHHHHHHHHcCC-CcEEEEEcCCC-CC----hHHHH----HHHHHhcCCCEEEEEeCCC-CCCc
Q 019818 103 TYEVLIIDDGSSDGTKRVAFDFVRKYTV-DNVRIILLGRN-HG----KGEAI----RKGMLHSRGELLLMLDADG-ATKV 171 (335)
Q Consensus 103 ~~eiivvdd~s~d~t~~~~~~~~~~~~~-~~i~vi~~~~~-~G----k~~al----n~g~~~a~~d~v~~~DaD~-~~~~ 171 (335)
++.|+.|-.-.++...+.++++.++.+. .++.++..+.. .+ ..... ..-+.....++++.+|-.. .++.
T Consensus 2 ki~IiaIGk~~~~~~~~~i~~Y~KRl~~~~~~~~iei~~~~~~~~~~~~~~~~~E~~~il~~~~~~~~I~LDe~Gk~~sS 81 (153)
T d1ns5a_ 2 KLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDT 81 (153)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHTTSCTTSCEEEEEECCCCCCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCCH
T ss_pred eEEEEEEcCcCcHHHHHHHHHHHHHcCCcCCeEEEEecCccCCcchhHHHHHHHHHHHHHhhccCCeEEEeeccccccCh
Confidence 3677777766666677778888777652 25666665432 11 11111 1122334578899999988 4677
Q ss_pred chHHHHHHHHHHh
Q 019818 172 TDLEKLESQIHAV 184 (335)
Q Consensus 172 ~~l~~l~~~~~~~ 184 (335)
..+.+.+......
T Consensus 82 ~~fA~~l~~~~~~ 94 (153)
T d1ns5a_ 82 PQLAAELERWKLD 94 (153)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc
Confidence 8888888877654
No 39
>d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.20 E-value=1.7e+02 Score=22.97 Aligned_cols=74 Identities=8% Similarity=0.037 Sum_probs=42.6
Q ss_pred CCceEEEEEeccCCCCChHHHHHHHHH-HHHHhhhcC--------CCCceEEEEEECCCCcch-HHHHHHHHHHcCCCcE
Q 019818 64 AEKYISLIIPAFNEEHRLPGALDETLN-YLQQRAAKD--------KSFTYEVLIIDDGSSDGT-KRVAFDFVRKYTVDNV 133 (335)
Q Consensus 64 ~~~~vsViip~~ne~~~l~~~l~sl~~-~~~~~~~~~--------~~~~~eiivvdd~s~d~t-~~~~~~~~~~~~~~~i 133 (335)
...+|.|++|.=.........+..-.+ ..+.. |.. +..++|+++.|+.++..+ ...++++..... .++
T Consensus 6 ~~i~igvllP~tg~~~~~~~~~~~a~~lAv~~i-N~~g~~~~~~~~g~~i~~~~~D~~~~~~~~~~~~~~l~~~~~-~~v 83 (401)
T d1jdpa_ 6 QKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSV-EGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARG-AKP 83 (401)
T ss_dssp CEEEEEEEECSSTTSTTCHHHHHHHHHHHHHHH-CC-----CCSCTTCEEEEEEEECTTSTHHHHHHHHHHHHTTT-CCC
T ss_pred CccEEEEEECCCCchhhhhHHHHHHHHHHHHHH-HhcCCccccCCCCcEEEEEEEeCCCCHHHHHHHHHHHHHhcc-CCc
Confidence 345789999997776666655543333 33322 111 245799999999876654 555566544322 145
Q ss_pred EEEEcC
Q 019818 134 RIILLG 139 (335)
Q Consensus 134 ~vi~~~ 139 (335)
..+--+
T Consensus 84 ~~iiG~ 89 (401)
T d1jdpa_ 84 DLILGP 89 (401)
T ss_dssp SEEECC
T ss_pred EEEECC
Confidence 455443
No 40
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.41 E-value=71 Score=23.83 Aligned_cols=90 Identities=19% Similarity=0.210 Sum_probs=50.4
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCCChHHHHHH
Q 019818 71 IIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNHGKGEAIRK 150 (335)
Q Consensus 71 iip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~Gk~~aln~ 150 (335)
++|+. ..+.|+..|+++... ...+|+|+...-.+ ...+. ...............|.+.++..
T Consensus 24 li~i~-gkpiie~~i~~l~~~----------~~~~iiiv~~~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~ 85 (248)
T d2oi6a2 24 LHTLA-GKAMVQHVIDAANEL----------GAAHVHLVYGHGGD----LLKQA---LKDDNLNWVLQAEQLGTGHAMQQ 85 (248)
T ss_dssp GSEET-TEEHHHHHHHHHHHH----------TCSCEEEEESSCHH----HHHHH---CCCTTEEEEECSSCCCHHHHHHH
T ss_pred eEEEC-ChhHHHHHHHHHHHc----------CCcEEEeccCcccc----eeeee---cccccccccccccCcccHHHHHh
Confidence 45664 456777777776552 23566666553222 12222 22224555666667899889888
Q ss_pred HHHhcC-CCEEEEEeCCCC-CCcchHHHHH
Q 019818 151 GMLHSR-GELLLMLDADGA-TKVTDLEKLE 178 (335)
Q Consensus 151 g~~~a~-~d~v~~~DaD~~-~~~~~l~~l~ 178 (335)
+..... ...+++.++|.. .++..+..+.
T Consensus 86 ~~~~i~~~~~~~i~~~d~~~~~~~~~~~~~ 115 (248)
T d2oi6a2 86 AAPFFADDEDILMLYGDVPLISVETLQRLR 115 (248)
T ss_dssp HGGGSCTTSEEEEEETTCTTCCHHHHHHHH
T ss_pred hhhhhccccceeeecCccccccchhHHHHH
Confidence 888753 455555555554 4444444444
No 41
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.19 E-value=69 Score=25.58 Aligned_cols=96 Identities=14% Similarity=0.065 Sum_probs=46.4
Q ss_pred ceEEEEEeccCCCCChHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCCcchHHHHHHHHHHcCCCcEEEEEcCCCC---
Q 019818 66 KYISLIIPAFNEEHRLPGALDETLNYLQQRAAKDKSFTYEVLIIDDGSSDGTKRVAFDFVRKYTVDNVRIILLGRNH--- 142 (335)
Q Consensus 66 ~~vsViip~~ne~~~l~~~l~sl~~~~~~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~i~vi~~~~~~--- 142 (335)
.+|.|.+-|-+.. + +.++.+++++.+-+ .+..+...+|-.|+..+-.. . ...+..+++++...+..
T Consensus 52 ~tIgl~vfATGkY--~-~Fl~~f~eSaek~F--mpg~~v~yyvFTD~~~~vP~-----i-~l~~~~~v~v~~i~~~~~Wp 120 (283)
T d1lzia_ 52 TTIGLTVFAIKKY--V-AFLKLFLETAEKHF--MVGHRVHYYVFTDQPAAVPR-----V-TLGTGRQLSVLEVRAYKRWQ 120 (283)
T ss_dssp CEEEEEEEECGGG--G-GGHHHHHHHHHHHB--STTSEEEEEEEESCGGGSCC-----C-CCCTTEEEEEEECC------
T ss_pred ceEEEEEEEeChH--H-HHHHHHHHHHHHhc--CCCCeeEEEEEECCCccCCc-----c-ccccCCceEEEeccCCCCCc
Confidence 3455555554543 3 46667776666543 35555666777776332100 0 01112256666644321
Q ss_pred C----hHHHHHHHHH---hcCCCEEEEEeCCCCCCcc
Q 019818 143 G----KGEAIRKGML---HSRGELLLMLDADGATKVT 172 (335)
Q Consensus 143 G----k~~aln~g~~---~a~~d~v~~~DaD~~~~~~ 172 (335)
- +-..++..+. ....||++++|+|..+...
T Consensus 121 ~iTL~R~~~i~k~i~~~~~~e~DyLf~~DaDm~f~~~ 157 (283)
T d1lzia_ 121 DVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDH 157 (283)
T ss_dssp -------------CHHHHHHHCSEEEEECSSEEECSC
T ss_pred hHHHHHHHHHHHHHHHHhhhcCCEEEEeecceEEecc
Confidence 1 2222332211 2357999999999976443
Done!