BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019819
(335 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor I
pdb|1T6G|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
pdb|1T6G|B Chain B, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
Length = 381
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 31/196 (15%)
Query: 34 FDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC-AALHWPNP----PRC--- 85
D L W CD +PP + +PCS+P C A +P P P C
Sbjct: 28 LDVAGPLVWSTCDG-----GQPPAE--------IPCSSPTCLLANAYPAPGCPAPSCGSD 74
Query: 86 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNG----SVFNVPLTFGCGYNQHNPGPL 141
KH Y G + G+L F ++G S NV + C ++
Sbjct: 75 KHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS-- 132
Query: 142 SPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVP----SSGV 197
P + GV GL +++ +Q+ + N C+ G GV G G VP + +
Sbjct: 133 LPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSM 192
Query: 198 AWTPMLQNSADLKHYI 213
+TP++ HYI
Sbjct: 193 PYTPLVTKGGSPAHYI 208
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6
pdb|1UH8|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 8.0
pdb|1UH9|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 7.0
Length = 325
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 27/144 (18%)
Query: 21 LTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80
+T+G P K F+ DFDTGS W+ CT C + +Y P+++ ++ R
Sbjct: 21 VTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNC-GSRQTKYDPNQSSTYQADGRT------ 72
Query: 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGP 140
+ I YGDG S+ G L D L G + T +
Sbjct: 73 -------------WSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFA 115
Query: 141 LSPPDTAGVLGLGRGRISIVSQLR 164
P D G+LGLG I+ V ++
Sbjct: 116 SGPND--GLLGLGFDTITTVRGVK 137
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic
Proteinase From Rhizopus Chinensis. Implications For A
Mechanism Of Action
pdb|4APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|5APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|6APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|2APR|A Chain A, Structure And Refinement At 1.8 Angstroms Resolution Of
The Aspartic Proteinase From Rhizopus Chinensis
Length = 325
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 27/144 (18%)
Query: 21 LTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80
+T+G P K F+ DFDTGS W+ CT C + +Y P+++ ++ R
Sbjct: 21 VTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNC-GSGQTKYDPNQSSTYQADGRT------ 72
Query: 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGP 140
+ I YGDG S+ G L D L G + T +
Sbjct: 73 -------------WSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFA 115
Query: 141 LSPPDTAGVLGLGRGRISIVSQLR 164
P D G+LGLG I+ V ++
Sbjct: 116 SGPND--GLLGLGFDTITTVRGVK 137
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In
Complex With Bacillus Subtilis Xylanase
Length = 381
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 31/196 (15%)
Query: 34 FDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC-AALHWPNP----PRC--- 85
D L W C +PP + +PCS+P C A +P P P C
Sbjct: 28 LDVAGPLVWSTCKG-----GQPPAE--------IPCSSPTCLLANAYPAPGCPAPSCGSD 74
Query: 86 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNG----SVFNVPLTFGCGYNQHNPGPL 141
KH Y G + G+L F ++G S NV + C ++
Sbjct: 75 KHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS-- 132
Query: 142 SPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVP----SSGV 197
P + GV GL +++ +Q+ + N C+ G GV G G VP + +
Sbjct: 133 LPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSM 192
Query: 198 AWTPMLQNSADLKHYI 213
+TP++ HYI
Sbjct: 193 PYTPLVTKGGSPAHYI 208
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans
pdb|2QZW|B Chain B, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans
Length = 341
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 34/252 (13%)
Query: 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAAL 77
A ++T+G + F+ DTGS WV DA T C KP +P ++ C + +
Sbjct: 15 AADITIGSNKQKFNVIVDTGSSDLWVP-DASVT-CDKP-----RPGQSADFC---KGKGI 64
Query: 78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTD--------LFPLRFSNGSVFNVPL-T 128
+ P N + I YGDG SS G L D + F++ + ++P
Sbjct: 65 YTPKSSTTSQ-NLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGI 123
Query: 129 FGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLG 188
G GY + D V +G I+ Y L N GQ ++F G
Sbjct: 124 LGIGYKTNEAA--GDYDNVPVTLKNQGVIA----KNAYSLYLNSPNAATGQ----IIFGG 173
Query: 189 DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRV 248
K SG + + +L+ + L GK+ ++ ++ DSG + Y V
Sbjct: 174 VDKAKYSGSLIAVPVTSDRELR---ITLNSLKAVGKNIN-GNIDVLLDSGTTITYLQQDV 229
Query: 249 YQEIVSLIMRDL 260
Q+I+ +L
Sbjct: 230 AQDIIDAFQAEL 241
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of
A Pepsin From Atlantic Cod (Gadus Morhua)
Length = 324
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 55/256 (21%)
Query: 21 LTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80
+++G PP+ F FDTGS WV + C+ ++KP ++ +
Sbjct: 18 ISIGTPPESFKVIFDTGSSNLWVSS-SHCSAQACSNHNKFKPRQSSTYVETGKTV----- 71
Query: 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGP 140
++ YG GG G L D + GS N L G +Q PGP
Sbjct: 72 --------------DLTYGTGGMR-GILGQDT--VSVGGGSDPNQEL----GESQTEPGP 110
Query: 141 L---SPPDTAGVLGL------GRGRISIVSQLREYGLI-RNVIGHCI---GQNGRGVLFL 187
+P D G+LGL G + + + L+ +++ + G NG V+
Sbjct: 111 FQAAAPFD--GILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLG 168
Query: 188 G-DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 246
G D + + W P+ K++ + + +G++ + I D+G TS
Sbjct: 169 GVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACEGCQAIVDTG------TS 218
Query: 247 RVYQEIVSL--IMRDL 260
++ + +L IM+D+
Sbjct: 219 KIVAPVSALANIMKDI 234
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans
Complexed With A70450
pdb|3PVK|A Chain A, Secreted Aspartic Protease 2 In Complex With Benzamidine
pdb|3Q70|A Chain A, Secreted Aspartic Protease In Complex With Ritonavir
Length = 342
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 91/250 (36%), Gaps = 43/250 (17%)
Query: 18 AVNLTVGKPPKLFDFDFDTGSDLTWV-----QCDAPCTGCTKPPEKQYKPHKNIVPCSNP 72
A ++TVG + + DTGS WV C + T KQ + P +
Sbjct: 15 AADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYD---PSGSS 71
Query: 73 RCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLF---PLRFSNGSVFNVPLT- 128
L+ P ++I YGDG SS G L D + N + +V T
Sbjct: 72 ASQDLNTP-------------FKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS 118
Query: 129 -----FGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRG 183
G GY + G D V +G I+ Y L N GQ
Sbjct: 119 IDQGILGVGYKTNEAG--GSYDNVPVTLKKQGVIA----KNAYSLYLNSPDAATGQ---- 168
Query: 184 VLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAY 243
++F G SG + + +L+ LG E+ SGK+ ++ ++ DSG + Y
Sbjct: 169 IIFGGVDNAKYSGSLIALPVTSDRELR-ISLGSVEV--SGKTINTDNVDVLLDSGTTITY 225
Query: 244 FTSRVYQEIV 253
+ +I+
Sbjct: 226 LQQDLADQII 235
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans
Length = 342
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 90/250 (36%), Gaps = 43/250 (17%)
Query: 18 AVNLTVGKPPKLFDFDFDTGSDLTWV-----QCDAPCTGCTKPPEKQYKPHKNIVPCSNP 72
A ++TVG + + DTGS WV C + T KQ + P +
Sbjct: 15 AADITVGSNNQKLNVIVDTGSSDLWVPDVNIDCQVTYSDQTADFCKQKGTYD---PSGSS 71
Query: 73 RCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLF---PLRFSNGSVFNVPLT- 128
L+ P + I YGDG SS G L D + N + +V T
Sbjct: 72 ASQDLNTP-------------FSIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS 118
Query: 129 -----FGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRG 183
G GY + G D V +G I+ Y L N GQ
Sbjct: 119 IDQGILGVGYKTNEAG--GSYDNVPVTLKKQGVIA----KNAYSLYLNSPDSATGQ---- 168
Query: 184 VLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAY 243
++F G SG + + +L+ LG E+ SGK+ ++ ++ DSG + Y
Sbjct: 169 IIFGGVDNAKYSGSLIALPVTSDRELR-ISLGSVEV--SGKTINTDNVDVLLDSGTTITY 225
Query: 244 FTSRVYQEIV 253
+ +I+
Sbjct: 226 LQQDLADQII 235
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of
Cathepsin E
Length = 351
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 20 NLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYK 61
+++G PP+ F FDTGS WV P CT P K +
Sbjct: 28 TISIGSPPQNFTVIFDTGSSNLWV----PSVYCTSPACKTHS 65
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex
pdb|2ASI|A Chain A, Aspartic Proteinase
Length = 361
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTK 54
A+ +++G P + F FDTGS TWV P GCTK
Sbjct: 21 AIPVSIGTPGQDFLLLFDTGSSDTWV----PHKGCTK 53
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At
1.62 Angstroms Resolution
pdb|1AVF|A Chain A, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
pdb|1AVF|J Chain J, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
Length = 329
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 87/237 (36%), Gaps = 50/237 (21%)
Query: 21 LTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80
+++G PP+ F FDTGS WV V C + C +
Sbjct: 18 ISIGTPPQNFLVLFDTGSSNLWVPS---------------------VYCQSQACTSHSRF 56
Query: 81 NPPRCK-HPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVP-LTFGCGYNQHNP 138
NP + + + ++YG G +T F VP FG N+ P
Sbjct: 57 NPSESSTYSTNGQTFSLQYGSGS------LTGFFGYDTLTVQSIQVPNQEFGLSENE--P 108
Query: 139 GP-LSPPDTAGVLGLGRGRISI-------VSQLREYGLIRNV----IGHCIGQNGRGVLF 186
G G++GL +S+ ++E L V + + G +G V+F
Sbjct: 109 GTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVF 168
Query: 187 LG-DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL--KDLTLIFDSGAS 240
G D + + + W P+ Q ++ +G E L G++ G + I D+G S
Sbjct: 169 GGVDSSLYTGQIYWAPVTQE----LYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTS 221
>pdb|3CXD|H Chain H, Crystal Structure Of Anti-Osteopontin Antibody 23c3 In
Complex With Its Epitope Peptide
pdb|3DSF|H Chain H, Crystal Structure Of Anti-Osteopontin Antibody 23c3 In
Complex With W43a Mutated Epitope Peptide
Length = 216
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 111 DLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIR 170
++PL G++ N +T GC N + P P++ AG LG G V Q Y L
Sbjct: 123 SVYPLAPGGGAISNSMVTLGCLVNGYFPEPVTVTWNAGSLGSGVHTFPAVLQSDLYTLSS 182
Query: 171 NV 172
+V
Sbjct: 183 SV 184
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren
pdb|3D91|B Chain B, Human Renin In Complex With Remikiren
pdb|3G6Z|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G6Z|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3K1W|A Chain A, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3K1W|B Chain B, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3OWN|A Chain A, Potent Macrocyclic Renin Inhibitors
pdb|3OWN|B Chain B, Potent Macrocyclic Renin Inhibitors
Length = 341
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 26 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 58
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAD|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3O9L|A Chain A, Design And Optimisation Of New Piperidines As Renin
Inhibitors
pdb|3O9L|C Chain C, Design And Optimisation Of New Piperidines As Renin
Inhibitors
Length = 166
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 26 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 58
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|C Chain C, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|E Chain E, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|G Chain G, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
Length = 383
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 69 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 101
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKS|B Chain B, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKT|A Chain A, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2BKT|B Chain B, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2IKO|A Chain A, Crystal Structure Of Human Renin Complexed With
Inhibitor
pdb|2IKO|B Chain B, Crystal Structure Of Human Renin Complexed With
Inhibitor
pdb|2IKU|A Chain A, Crystal Structure Of Human Renin Complexed With
Inhibitors
pdb|2IKU|B Chain B, Crystal Structure Of Human Renin Complexed With
Inhibitors
pdb|2IL2|A Chain A, Crystal Structure Of Human Renin Complexed With
Inhibitor
pdb|2IL2|B Chain B, Crystal Structure Of Human Renin Complexed With
Inhibitor
pdb|2V0Z|C Chain C, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V0Z|O Chain O, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V10|C Chain C, Crystal Structure Of Renin With Inhibitor 9
pdb|2V10|O Chain O, Crystal Structure Of Renin With Inhibitor 9
pdb|2V11|C Chain C, Crystal Structure Of Renin With Inhibitor 6
pdb|2V11|O Chain O, Crystal Structure Of Renin With Inhibitor 6
pdb|2V12|C Chain C, Crystal Structure Of Renin With Inhibitor 8
pdb|2V12|O Chain O, Crystal Structure Of Renin With Inhibitor 8
pdb|1BBS|A Chain A, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1BBS|B Chain B, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1RNE|A Chain A, The Crystal Structure Of Recombinant Glycosylated Human
Renin Alone And In Complex With A Transition State
Analog Inhibitor
pdb|2REN|A Chain A, Structure Of Recombinant Human Renin, A Target For
Cardiovascular- Active Drugs, At 2.5 Angstroms
Resolution
pdb|2V13|A Chain A, Crystal Structure Of Renin With Inhibitor 7
pdb|2V16|C Chain C, Crystal Structure Of Renin With Inhibitor 3
pdb|2V16|O Chain O, Crystal Structure Of Renin With Inhibitor 3
pdb|3G72|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G72|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3OQF|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OQF|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OOT|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OOT|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3Q3T|A Chain A, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3Q3T|B Chain B, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3SFC|A Chain A, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3SFC|B Chain B, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3Q4B|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q4B|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3VSW|A Chain A, Human Renin In Complex With Compound 8
pdb|3VSW|B Chain B, Human Renin In Complex With Compound 8
pdb|3VSX|A Chain A, Human Renin In Complex With Compound 18
pdb|3VSX|B Chain B, Human Renin In Complex With Compound 18
pdb|3VYD|A Chain A, Human Renin In Complex With Inhibitor 6
pdb|3VYD|B Chain B, Human Renin In Complex With Inhibitor 6
pdb|3VYE|A Chain A, Human Renin In Complex With Inhibitor 7
pdb|3VYE|B Chain B, Human Renin In Complex With Inhibitor 7
pdb|3VYF|A Chain A, Human Renin In Complex With Inhibitor 9
pdb|3VYF|B Chain B, Human Renin In Complex With Inhibitor 9
pdb|4GJ8|A Chain A, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ8|B Chain B, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ9|A Chain A, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJ9|B Chain B, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJA|A Chain A, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJA|B Chain B, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJB|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJB|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJC|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJC|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJD|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
pdb|4GJD|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
Length = 340
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 26 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 58
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
pdb|1SMR|C Chain C, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
pdb|1SMR|E Chain E, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
pdb|1SMR|G Chain G, The 3-D Structure Of Mouse Submaxillary Renin Complexed
With A Decapeptide Inhibitor Ch-66 Based On The 4-16
Fragment Of Rat Angiotensinogen
Length = 335
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 20 NLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTK 54
+ +G PP+ F FDTGS WV P T C++
Sbjct: 20 EIGIGTPPQTFKVIFDTGSANLWV----PSTKCSR 50
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX
pdb|2I4Q|B Chain B, Human ReninPF02342674 COMPLEX
Length = 336
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 22 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 54
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G24|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G26|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G26|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G27|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G27|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2FS4|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2FS4|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G1N|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G1N|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G1O|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G1O|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G1R|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G1R|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G1S|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G1S|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G1Y|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G1Y|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G20|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G20|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The C Ring
pdb|2G21|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G21|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G22|A Chain A, Ketopiperazine-based Renin Inhibitors: Optimization Of
The "c" Ring
pdb|2G22|B Chain B, Ketopiperazine-based Renin Inhibitors: Optimization Of
The "c" Ring
Length = 333
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 20 NLTVGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+ +G PP+ F FDTGS WV +C T C
Sbjct: 16 EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 51
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1HRN|B Chain B, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1BIM|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIM|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|3GW5|A Chain A, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3GW5|B Chain B, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3KM4|A Chain A, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
pdb|3KM4|B Chain B, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
Length = 337
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 23 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 55
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin
pdb|3VCM|B Chain B, Crystal Structure Of Human Prorenin
Length = 335
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 23 VGKPPKLFDFDFDTGSDLTWV---QCDAPCTGC 52
+G PP+ F FDTGS WV +C T C
Sbjct: 26 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC 58
>pdb|1IBQ|A Chain A, Aspergillopepsin From Aspergillus Phoenicis
pdb|1IBQ|B Chain B, Aspergillopepsin From Aspergillus Phoenicis
Length = 325
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 25/92 (27%)
Query: 21 LTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNP-RCAALHW 79
+TVGK DFDTGS WV D + P + H P S+ + + W
Sbjct: 20 VTVGKST--LHLDFDTGSADLWVFSD-------ELPSSEQTGHDLYTPSSSATKLSGYSW 70
Query: 80 PNPPRCKHPNDQCDYEIEYGDGGSSIGALVTD 111
+I YGDG S+ G + D
Sbjct: 71 ---------------DISYGDGSSASGDVYRD 87
>pdb|1GKT|A Chain A, Neutron Laue Diffraction Structure Of Endothiapepsin
Complexed With Transition State Analogue Inhibitor H261
Length = 329
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 23 VGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN 65
+G P + + DFDTGS WV T ++ + Y P K+
Sbjct: 23 IGTPAQTLNLDFDTGSSDLWVFSSE--TTASEVXQTIYTPSKS 63
>pdb|1GVT|A Chain A, Endothiapepsin Complex With Cp-80,794
pdb|1GVU|A Chain A, Endothiapepsin Complex With H189
pdb|1GVV|A Chain A, Five Atomic Resolution Structures Of Endothiapepsin
Inhibitor Complexes; Implications For The Aspartic
Proteinase Mechanism
pdb|1GVW|A Chain A, Endothiapepsin Complex With Pd-130,328
pdb|1GVX|A Chain A, Endothiapepsin Complexed With H256
pdb|1OEX|A Chain A, Atomic Resolution Structure Of Endothiapepsin In Complex
With A Hydroxyethylene Transition State Analogue
Inhibitor H261
pdb|2JJI|A Chain A, Endothiapepsin In Complex With A Gem-Diol Inhibitor.
pdb|2JJJ|A Chain A, Endothiapepsin In Complex With A Gem-Diol Inhibitor.
pdb|2VS2|A Chain A, Neutron Diffraction Structure Of Endothiapepsin In
Complex With A Gem- Diol Inhibitor.
pdb|3URJ|A Chain A, Type Iv Native Endothiapepsin
pdb|3URI|A Chain A, Endothiapepsin-Db5 Complex.
pdb|3URL|A Chain A, Endothiapepsin-Db6 Complex.
pdb|1OEW|A Chain A, Atomic Resolution Structure Of Native Endothiapepsin
Length = 329
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 23 VGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN 65
+G P + + DFDTGS WV T ++ + Y P K+
Sbjct: 23 IGTPAQTLNLDFDTGSSDLWVFSSE--TTASEVXQTIYTPSKS 63
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
Length = 413
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 67/196 (34%), Gaps = 40/196 (20%)
Query: 35 DTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC------AALHWPNPPRCKHP 88
D G WV CD T Y+P V C +C A N PR
Sbjct: 40 DLGGRFLWVDCDQNYVSST------YRP----VRCRTSQCSLSGSIACGDCFNGPRPGCN 89
Query: 89 NDQCDY-----EIEYGDGGSSIGALVTDLFPLRFSNGSVFNVP-LTFGCGYNQHNPGPLS 142
N+ C I GG +V+ S+G V VP F C P L
Sbjct: 90 NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCA-----PTSLL 144
Query: 143 PPDTAGVLG---LGRGRISIVSQLREYGLIRNVIGHCI--GQNGRGVLFLGDG------- 190
+GV+G LGR RI++ SQ + C+ + V+ G+
Sbjct: 145 QNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPN 204
Query: 191 -KVPSSGVAWTPMLQN 205
V + +TP+L N
Sbjct: 205 IIVSDKTLTYTPLLTN 220
>pdb|1EPR|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-135, 040
Length = 330
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 23 VGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN 65
+G P + + DFDTGS WV + T + Y P K+
Sbjct: 23 IGTPAQTLNLDFDTGSSDLWV-FSSETTASEVDGQTIYTPSKS 64
>pdb|1ER8|E Chain E, The Active Site Of Aspartic Proteinases
pdb|2ER0|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes
pdb|2ER6|E Chain E, The Structure Of A Synthetic Pepsin Inhibitor Complexed
With Endothiapepsin.
pdb|2ER7|E Chain E, X-Ray Analyses Of Aspartic Proteinases.Iii.
Three-Dimensional Structure Of Endothiapepsin Complexed
With A Transition-State Isostere Inhibitor Of Renin At
1.6 Angstroms Resolution
pdb|2ER9|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes.
pdb|3ER3|E Chain E, The Active Site Of Aspartic Proteinases
pdb|3ER5|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER1|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER2|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER4|E Chain E, High-Resolution X-Ray Analyses Of Renin
Inhibitor-Aspartic Proteinase Complexes
pdb|5ER1|E Chain E, A Rational Approach To The Design Of Antihypertensives.
X-Ray Studies Of Complexes Between Aspartic Proteinases
And Aminoalcohol Renin Inhibitors
pdb|5ER2|E Chain E, High-Resolution X-Ray Diffraction Study Of The Complex
Between Endothiapepsin And An Oligopeptide Inhibitor.
The Analysis Of The Inhibitor Binding And Description
Of The Rigid Body Shift In The Enzyme
pdb|1EED|P Chain P, X-Ray Crystallographic Analysis Of Inhibition Of
Endothiapepsin By Cyclohexyl Renin Inhibitors
pdb|1ENT|E Chain E, X-Ray Analyses Of Aspartic Proteinases. The
Three-Dimensional Structure At 2.1 Angstroms Resolution
Of Endothiapepsin
pdb|1EPL|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPM|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPN|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPO|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Cp-81,282 (Mor Phe Nle Chf Nme)
pdb|1EPP|E Chain E, Endothia Aspartic Proteinase (endothiapepsin) Complexed
With Pd-130, 693 (mas Phe Lys+mtf Sta Mba)
pdb|1EPQ|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-133, 450 (Sot Phe Gly+scc Gcl)
pdb|1E5O|E Chain E, Endothiapepsin Complex With Inhibitor Db2
pdb|1E81|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd61395
pdb|1E82|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd59601
pdb|1E80|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd56133
pdb|1OD1|A Chain A, Endothiapepsin Pd135,040 Complex
pdb|4APE|A Chain A, The Active Site Of Aspartic Proteinases
pdb|2V00|A Chain A, X-Ray Crystal Structure Of Endothiapepsin Complexed With
Compound 1
pdb|3LZY|A Chain A, Crystal Structure Of Endothiapesin In Complex With Xenon
pdb|3PB5|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBZ|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCW|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCZ|A Chain A, Endothiapepsin In Complex With Benzamidine
pdb|3PGI|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PRS|A Chain A, Endothiapepsin In Complex With Ritonavir
pdb|3PI0|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLL|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PM4|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMU|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMY|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PSY|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3PWW|A Chain A, Endothiapepsin In Complex With Saquinavir
pdb|3Q6Y|A Chain A, Endothiapepsin In Complex With A Pyrrolidine Based
Inhibitor
pdb|3T6I|A Chain A, Endothiapepsin In Complex With An Azepin Derivative
pdb|3T7P|A Chain A, Endothiapepsin In Complex With A Hydrazide Derivative
pdb|3T7Q|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3T7X|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
Length = 330
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 23 VGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN 65
+G P + + DFDTGS WV + T + Y P K+
Sbjct: 23 IGTPAQTLNLDFDTGSSDLWV-FSSETTASEVDGQTIYTPSKS 64
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
Length = 413
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 67/196 (34%), Gaps = 40/196 (20%)
Query: 35 DTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC------AALHWPNPPRCKHP 88
D G WV CD T Y+P V C +C A N PR
Sbjct: 40 DLGGRFLWVDCDQNYVSST------YRP----VRCRTSQCSLSGSIACGDCFNGPRPGCN 89
Query: 89 NDQCDY-----EIEYGDGGSSIGALVTDLFPLRFSNGSVFNVP-LTFGCGYNQHNPGPLS 142
N+ C I GG +V+ S+G V VP F C P L
Sbjct: 90 NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCA-----PTSLL 144
Query: 143 PPDTAGVLG---LGRGRISIVSQLREYGLIRNVIGHCI--GQNGRGVLFLGDG------- 190
+GV+G LGR RI++ SQ + C+ + V+ G+
Sbjct: 145 QNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPN 204
Query: 191 -KVPSSGVAWTPMLQN 205
V + +TP+L N
Sbjct: 205 IIVSDKTLTYTPLLTN 220
>pdb|2DTG|C Chain C, Insulin Receptor (Ir) Ectodomain In Complex With Fab's
Length = 215
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 6/137 (4%)
Query: 37 GSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEI 96
G L W+ P G TK EK +K + + A +H + K C E
Sbjct: 42 GQGLEWIGWIYPGDGSTKYNEK-FKGKATLTADKSSSTAYMHLSSLTSEKSAVYFCAREW 100
Query: 97 EYGDGGS--SIGALVT---DLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLG 151
Y G+ ++ A T ++PL + + N +T GC + P P++ +G L
Sbjct: 101 AYWGQGTLVTVSAAKTTAPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160
Query: 152 LGRGRISIVSQLREYGL 168
G V Q Y L
Sbjct: 161 SGVHTFPAVLQSDLYTL 177
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L.
pdb|1B5F|C Chain C, Native Cardosin A From Cynara Cardunculus L
Length = 239
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 21 LTVGKPPKLFDFDFDTGSDLTWV 43
+ +G PP+ F FDTGS + WV
Sbjct: 19 IGIGTPPQKFTVIFDTGSSVLWV 41
>pdb|1WKR|A Chain A, Crystal Structure Of Aspartic Proteinase From Irpex
Lacteus
Length = 340
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 19 VNLTVGKPPKLFDFDFDTGSDLTWVQCD 46
VN+ VG P + DTGS TW+ D
Sbjct: 16 VNVGVGSPATTYSLLVDTGSSNTWLGAD 43
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean
Length = 403
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 143 PPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDG 190
P +T GV GLG IS+ +QL + ++ C+ + +G + GD
Sbjct: 152 PRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDA 201
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|B Chain B, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|C Chain C, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase
Length = 478
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 20 NLTVGKPPKLFDFDFDTGSDLTWV 43
+ VG PP+ F FDTGS WV
Sbjct: 57 EIGVGTPPQKFTVIFDTGSSNLWV 80
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And
Refinement At 2.0 Angstroms Resolution Of The Aspartic
Proteinase From Mucor Pusillus
Length = 361
Score = 27.7 bits (60), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 25/90 (27%)
Query: 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPR-CAA 76
A+ +++G P + F FDTGS TWV PHK C N C
Sbjct: 21 AIPVSIGTPGQDFYLLFDTGSSDTWV------------------PHKG---CDNSEGCVG 59
Query: 77 LHWPNPPRCKHPNDQCDY--EIEYGDGGSS 104
+ +P + DY I YG GG++
Sbjct: 60 KRFFDPSSSSTFK-ETDYNLNITYGTGGAN 88
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.141 0.456
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,984,035
Number of Sequences: 62578
Number of extensions: 502427
Number of successful extensions: 1591
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1558
Number of HSP's gapped (non-prelim): 41
length of query: 335
length of database: 14,973,337
effective HSP length: 99
effective length of query: 236
effective length of database: 8,778,115
effective search space: 2071635140
effective search space used: 2071635140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)