Query 019819
Match_columns 335
No_of_seqs 150 out of 1356
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 07:34:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 8.1E-53 2.8E-57 399.8 27.2 311 6-333 6-365 (413)
2 1t6e_X Xylanase inhibitor; two 100.0 8.6E-48 3E-52 362.5 25.4 300 8-333 2-334 (381)
3 3psg_A Pepsinogen; hydrolase(a 100.0 2.7E-48 9.3E-53 364.2 21.6 273 7-331 44-332 (370)
4 3aup_A SBG7S, BG, basic 7S glo 100.0 5.5E-47 1.9E-51 359.6 30.6 298 7-333 8-352 (403)
5 2apr_A Rhizopuspepsin; hydrola 100.0 2.5E-47 8.4E-52 352.1 26.6 263 15-331 15-291 (325)
6 1tzs_A Cathepsin E; hydrolase, 100.0 2E-47 6.7E-52 356.4 24.8 275 4-331 8-304 (351)
7 1mpp_A Pepsin; hydrolase(acid 100.0 2.3E-47 7.8E-52 357.3 24.4 283 6-331 5-322 (361)
8 1am5_A Pepsin, acid proteinase 100.0 2.4E-47 8.2E-52 352.1 24.1 269 9-332 2-287 (324)
9 1dpj_A Proteinase A; proteinas 100.0 2.9E-47 1E-51 352.2 23.2 271 9-332 3-292 (329)
10 1oew_A Endothiapepsin; hydrola 100.0 8.8E-48 3E-52 355.6 19.0 276 6-331 3-295 (329)
11 3c9x_A Trichoderma reesei aspa 100.0 1.5E-47 5E-52 354.2 19.8 275 8-331 5-296 (329)
12 2x0b_A Renin; hydrolase-hormon 100.0 9.9E-48 3.4E-52 361.3 18.2 271 8-332 50-346 (383)
13 1j71_A Candidapepsin, aspartic 100.0 4.9E-47 1.7E-51 351.4 21.5 268 8-332 2-294 (334)
14 3cms_A Chymosin B; hydrolase, 100.0 3.2E-47 1.1E-51 351.1 20.0 272 7-332 2-290 (323)
15 1htr_B Gastricsin; aspartyl pr 100.0 4.4E-47 1.5E-51 351.1 18.7 266 11-331 5-290 (329)
16 4aa9_A Chymosin; hydrolase, as 100.0 5.5E-47 1.9E-51 349.1 18.2 270 10-331 2-286 (320)
17 3fv3_A SAPP1P-secreted asparti 100.0 2.7E-46 9.3E-51 347.2 22.9 268 8-331 2-298 (339)
18 1ibq_A Aspergillopepsin; aspar 100.0 2E-46 6.8E-51 346.0 21.5 274 5-331 2-291 (325)
19 2qzx_A Candidapepsin-5; aspart 100.0 2.5E-46 8.5E-51 347.8 21.2 270 8-331 2-300 (342)
20 3pvk_A Candidapepsin-2; hydrol 100.0 3.9E-46 1.3E-50 346.5 20.7 258 8-319 2-283 (342)
21 1miq_A Plasmepsin; aspartic pr 100.0 1.2E-46 4E-51 353.7 16.5 269 9-333 52-341 (375)
22 3k1w_A Renin; protease, altern 100.0 4.2E-46 1.4E-50 346.2 18.9 272 6-331 5-302 (341)
23 2bju_A Plasmepsin II; aspartic 100.0 1.3E-45 4.4E-50 352.7 18.6 271 9-333 128-417 (453)
24 1bxo_A Protein (penicillopepsi 100.0 7E-46 2.4E-50 342.1 16.1 271 6-331 4-289 (323)
25 1izd_A Aspartic proteinase; su 100.0 1.6E-45 5.6E-50 339.6 18.4 270 7-331 5-289 (323)
26 1yg9_A Aspartic protease BLA G 100.0 6.4E-45 2.2E-49 336.6 19.3 267 10-331 8-295 (330)
27 3qvc_A Histo-aspartic protease 100.0 3.5E-45 1.2E-49 350.0 17.2 269 7-333 125-416 (451)
28 1qdm_A Prophytepsin; aspartic 100.0 3.1E-44 1.1E-48 346.3 22.3 219 8-258 41-281 (478)
29 1wkr_A Polyporopepsin; hydrola 100.0 9.2E-44 3.1E-48 330.3 23.1 260 9-331 3-295 (340)
30 2ewy_A Beta-secretase 2; BACE2 100.0 3.2E-43 1.1E-47 331.7 24.1 276 15-329 13-319 (383)
31 2qp8_A Beta-secretase 1; BACE1 100.0 8E-43 2.7E-47 330.2 25.2 280 15-331 21-335 (395)
32 3vf3_A Beta-secretase 1; struc 100.0 1.2E-42 4.3E-47 329.7 26.1 278 15-329 28-338 (402)
33 3lpj_A Beta-secretase 1; alzhe 100.0 1.8E-42 6.2E-47 333.4 24.9 279 15-329 74-384 (455)
34 1b5f_A Protein (cardosin A); h 100.0 4.1E-42 1.4E-46 303.6 18.9 217 10-258 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 5.6E-28 1.9E-32 213.3 15.3 186 121-331 2-203 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 4E-21 1.4E-25 144.6 9.0 85 9-116 3-95 (97)
37 1b5f_B Protein (cardosin A); h 96.6 0.0016 5.6E-08 46.8 3.6 37 291-331 12-50 (87)
38 2i1a_A DNA damage-inducible pr 84.8 0.88 3E-05 35.6 4.1 29 15-45 25-53 (148)
39 1fmb_A EIAV protease; hydrolas 80.2 1.9 6.7E-05 31.7 4.1 25 18-44 10-34 (104)
40 2hs1_A HIV-1 protease; ultra-h 80.0 2.1 7.1E-05 31.2 4.1 26 18-45 10-35 (99)
41 3s8i_A Protein DDI1 homolog 1; 79.9 1.8 6.1E-05 34.1 4.1 30 15-46 23-52 (148)
42 3ec0_A Protease; HIV-2, inhibi 74.9 3.3 0.00011 30.1 4.0 27 18-46 10-36 (99)
43 2i1a_A DNA damage-inducible pr 72.1 4.7 0.00016 31.2 4.7 30 218-252 30-59 (148)
44 3s8i_A Protein DDI1 homolog 1; 69.3 4.3 0.00015 31.8 3.8 29 219-252 29-57 (148)
45 2hah_A Protease, retropepsin; 67.0 5.8 0.0002 29.7 3.9 23 21-45 18-40 (116)
46 3liy_A Protease; hydrolase, hy 66.2 6.4 0.00022 29.3 3.9 29 18-46 12-43 (116)
47 3sqf_A Protease; folded monome 61.9 8.7 0.0003 28.6 4.0 27 18-46 11-37 (114)
48 3slz_A GAG-Pro-POL polyprotein 56.6 11 0.00039 28.7 4.0 28 17-46 23-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 48.3 17 0.00058 30.0 4.0 26 17-44 9-34 (203)
50 2rsp_A RSV protease; hydrolase 47.8 20 0.00067 27.1 3.9 22 23-46 27-48 (124)
51 1lya_B Cathepsin D; lysosomal 45.4 26 0.00088 29.2 4.9 40 7-46 89-137 (241)
52 3c9x_A Trichoderma reesei aspa 42.7 31 0.0011 30.4 5.2 40 7-46 182-230 (329)
53 1qdm_A Prophytepsin; aspartic 38.8 41 0.0014 31.5 5.6 38 290-331 401-440 (478)
54 1bxo_A Protein (penicillopepsi 37.0 32 0.0011 30.2 4.3 40 7-46 178-224 (323)
55 1izd_A Aspartic proteinase; su 36.6 36 0.0012 29.9 4.6 40 7-46 178-225 (323)
56 1yg9_A Aspartic protease BLA G 36.6 24 0.00081 31.2 3.4 40 7-46 183-230 (330)
57 1oew_A Endothiapepsin; hydrola 35.6 35 0.0012 30.0 4.4 40 7-46 181-229 (329)
58 1ibq_A Aspergillopepsin; aspar 35.0 42 0.0014 29.5 4.8 40 7-46 177-225 (325)
59 2x0b_A Renin; hydrolase-hormon 34.8 45 0.0015 30.2 5.1 40 7-46 232-280 (383)
60 2apr_A Rhizopuspepsin; hydrola 33.7 37 0.0013 29.8 4.2 40 7-46 182-229 (325)
61 3cms_A Chymosin B; hydrolase, 32.4 53 0.0018 28.7 5.0 40 7-46 179-227 (323)
62 1tzs_A Cathepsin E; hydrolase, 32.2 39 0.0013 30.0 4.1 40 7-46 191-239 (351)
63 1htr_B Gastricsin; aspartyl pr 32.1 59 0.002 28.4 5.3 40 7-46 179-228 (329)
64 4aa9_A Chymosin; hydrolase, as 31.7 57 0.0019 28.4 5.1 40 7-46 176-224 (320)
65 1am5_A Pepsin, acid proteinase 31.5 74 0.0025 27.7 5.8 39 7-46 178-225 (324)
66 2hs1_A HIV-1 protease; ultra-h 31.5 32 0.0011 24.8 2.8 30 212-246 6-35 (99)
67 2bju_A Plasmepsin II; aspartic 30.6 69 0.0024 29.8 5.7 40 7-46 305-349 (453)
68 1miq_A Plasmepsin; aspartic pr 30.1 53 0.0018 29.6 4.7 40 7-46 229-273 (375)
69 3k1w_A Renin; protease, altern 29.6 51 0.0017 29.0 4.4 40 7-46 189-237 (341)
70 1mpp_A Pepsin; hydrolase(acid 29.1 69 0.0024 28.4 5.3 40 7-46 195-248 (361)
71 3psg_A Pepsinogen; hydrolase(a 28.7 66 0.0023 28.8 5.1 40 7-46 222-270 (370)
72 1dpj_A Proteinase A; proteinas 28.7 66 0.0023 28.1 5.0 40 7-46 182-229 (329)
73 3ka2_A [L-Ala51;Gly51']HIV-1 p 26.1 64 0.0022 26.5 4.0 26 18-45 114-139 (203)
74 3aup_A SBG7S, BG, basic 7S glo 26.0 64 0.0022 29.2 4.5 40 7-46 216-276 (403)
75 1j71_A Candidapepsin, aspartic 24.1 70 0.0024 28.0 4.3 40 7-46 183-229 (334)
76 2qzx_A Candidapepsin-5; aspart 22.9 75 0.0026 27.9 4.2 40 7-46 183-229 (342)
77 3fv3_A SAPP1P-secreted asparti 22.2 90 0.0031 27.3 4.6 40 7-46 185-231 (339)
78 3pvk_A Candidapepsin-2; hydrol 21.4 1.2E+02 0.0042 26.4 5.4 40 7-46 182-229 (342)
79 2qp8_A Beta-secretase 1; BACE1 20.9 49 0.0017 29.9 2.6 40 7-46 196-248 (395)
80 3vf3_A Beta-secretase 1; struc 20.5 68 0.0023 29.0 3.5 40 7-46 203-255 (402)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=8.1e-53 Score=399.85 Aligned_cols=311 Identities=17% Similarity=0.312 Sum_probs=246.1
Q ss_pred cceeEEeee-----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCC
Q 019819 6 IEFFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (335)
Q Consensus 6 ~~~~~~Pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~ 80 (335)
.+++.+||+ .+|+++|.||||||++.|+|||||+++||+|. +|. ....|. .+.|.+..|...+..
T Consensus 6 ~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~~~ 75 (413)
T 3vla_A 6 PSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSGSI 75 (413)
T ss_dssp CSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTTCC
T ss_pred CccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCcccccccccC
Confidence 478999999 78999999999999999999999999999988 661 122233 389999999876542
Q ss_pred C--------CCCCCCCCCCceeEEEe-CCCCeEEEEEEEEEEEeeecCCc-----ccccceEEeceeecCCCCCCCCCCC
Q 019819 81 N--------PPRCKHPNDQCDYEIEY-GDGGSSIGALVTDLFPLRFSNGS-----VFNVPLTFGCGYNQHNPGPLSPPDT 146 (335)
Q Consensus 81 ~--------~~~~~~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~~~~~~g~-----~~~~~~~fg~~~~~~~~~~~~~~~~ 146 (335)
. .+.|.. +.|.|.+.| ++++.+.|.+++|+|+|+..+|. ..++++.|||+..+...... ...
T Consensus 76 ~~~~c~s~~~~~c~~--~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~--~~~ 151 (413)
T 3vla_A 76 ACGDCFNGPRPGCNN--NTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA--SGV 151 (413)
T ss_dssp EEECCSSCCBTTBCS--SEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC--TTC
T ss_pred CCcccccCCCCCCCC--CcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc--ccc
Confidence 1 123433 579999999 58879999999999999865553 46789999999986321112 578
Q ss_pred ceEEeeCCCCCchHHHHhhcCcccceeeeeecc--CCceeEEeCCCCC-------CCCC-ceeeeceeCCCC--------
Q 019819 147 AGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGKV-------PSSG-VAWTPMLQNSAD-------- 208 (335)
Q Consensus 147 ~GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~--~~~g~l~fG~~~~-------~~~~-~~~~p~~~~~~~-------- 208 (335)
|||||||++.+|++.||.++++++++||+||.+ ..+|.|+||+.+. ..++ ++|+|+..++..
T Consensus 152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~ 231 (413)
T 3vla_A 152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG 231 (413)
T ss_dssp CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence 999999999999999999998889999999985 4689999999753 2466 999999987432
Q ss_pred --CCceEEEeeEEEecCEEeecC----------CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCc
Q 019819 209 --LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPI 276 (335)
Q Consensus 209 --~~~~~v~l~~i~v~~~~~~~~----------~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 276 (335)
..+|.|.|++|.|+++.+.++ ...+||||||++++||+++|++|.++|.+.+...+++++.....++.
T Consensus 232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~ 311 (413)
T 3vla_A 232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGA 311 (413)
T ss_dssp CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSC
T ss_pred CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcc
Confidence 279999999999999998764 36899999999999999999999999999875222444333345678
Q ss_pred cccCCcccccccccccccEEEEEcCCCCceEEEeCCCeEEEEEeCCCEEEEEEecCC
Q 019819 277 CWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTGK 333 (335)
Q Consensus 277 C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~~~y~~~~~~~~~~cl~~~~g~ 333 (335)
||..+.....++...+|+|+|+|+|+ +++|+|++++|+++..+ +..|++|+++.
T Consensus 312 C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~-~~~Cl~~~~~~ 365 (413)
T 3vla_A 312 CFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYIND-NVVCLGVVDGG 365 (413)
T ss_dssp EEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEET-TEEEECEEEEE
T ss_pred eeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCC-CcEEEEEEecC
Confidence 99864322112224689999999873 38999999999998654 57899998753
No 2
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.6e-48 Score=362.53 Aligned_cols=300 Identities=17% Similarity=0.319 Sum_probs=228.4
Q ss_pred eeEEeee-----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCC
Q 019819 8 FFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (335)
Q Consensus 8 ~~~~Pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~ 82 (335)
++.+||+ ..|+++|+|||| |+|||||+++||+|. +|. .|. .+.|.+..|...+....
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~----~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPA----EIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCC----CCBTTSHHHHHHHSSCC
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCC----ccCCCCchhccccCCCC
Confidence 4678888 789999999998 999999999999987 552 132 37888888875433222
Q ss_pred CCCCC-------CCCCc-eeEEEeCCCCeEEEEEEEEEEEeeecCCcccccce----EEeceeecC-CCCCCCCCCCceE
Q 019819 83 PRCKH-------PNDQC-DYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPL----TFGCGYNQH-NPGPLSPPDTAGV 149 (335)
Q Consensus 83 ~~~~~-------~~~~~-~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~----~fg~~~~~~-~~~~~~~~~~~GI 149 (335)
..|.. .++.| .|.+.|++|+.+.|.+++|+|+|+..+|...++++ .|||+..+. ..+ . ...|||
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~--~~~dGI 140 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-P--RGSTGV 140 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-C--TTEEEE
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-C--CCCceE
Confidence 34432 11456 59999999977899999999999865544445554 679998762 222 1 578999
Q ss_pred EeeCCCCCchHHHHhhcCcccceeeeeeccCCceeEEeCCCCC----CCCCceeeeceeCCCCCCceEEEeeEEEecCEE
Q 019819 150 LGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKV----PSSGVAWTPMLQNSADLKHYILGPAELLYSGKS 225 (335)
Q Consensus 150 lGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~~~~g~l~fG~~~~----~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~ 225 (335)
||||++.++++.||.++++++++||+||.+..+|.|+||+.+. ..+++.|+|+..++. ..+|.|.|++|.|+++.
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~-~~~y~v~l~~i~vg~~~ 219 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGG-SPAHYISARSIVVGDTR 219 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTT-CCSCEECEEEEEETTEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCC-CcceEEEEEEEEEcCEE
Confidence 9999999999999999986699999999876789999999753 368999999987643 24567999999999998
Q ss_pred eecCC-----CcEEEecCCcceeeCHHHHHHHHHHHHHHhcC-----CCCccC-CCCCCCCccccCCccccccccccccc
Q 019819 226 CGLKD-----LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG-----TPLKLA-PDDKTLPICWRGPFKALGQVTEYFKP 294 (335)
Q Consensus 226 ~~~~~-----~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~~P~ 294 (335)
+.++. ..+||||||++++||+++|++|.++|.+.+.. .++.+. .....+..|+..+..........+|+
T Consensus 220 ~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~ 299 (381)
T 1t6e_X 220 VPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPN 299 (381)
T ss_dssp CCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCC
T ss_pred ecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCe
Confidence 86542 57999999999999999999999999887641 112232 12335578997642211111235899
Q ss_pred EEEEEcCCCCceEEEeCCCeEEEEEeCCCEEEEEEecCC
Q 019819 295 LALSFTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLTGK 333 (335)
Q Consensus 295 i~f~f~g~~~~~~~~l~~~~y~~~~~~~~~~cl~~~~g~ 333 (335)
|+|+|+| +++++|++++|++...+ +..|++|+++.
T Consensus 300 i~f~f~g---g~~~~l~~~~y~~~~~~-~~~Cl~~~~~~ 334 (381)
T 1t6e_X 300 VQLGLDG---GSDWTMTGKNSMVDVKQ-GTACVAFVEMK 334 (381)
T ss_dssp EEEEETT---SCEEEECHHHHEEEEET-TEEEESEEECC
T ss_pred EEEEECC---CcEEEeCCCeEEEEcCC-CeEEEEEEcCC
Confidence 9999987 59999999999998654 57899998764
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.7e-48 Score=364.16 Aligned_cols=273 Identities=19% Similarity=0.301 Sum_probs=222.9
Q ss_pred ceeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCC
Q 019819 7 EFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (335)
Q Consensus 7 ~~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~ 82 (335)
.....||. ..|+++|+||||||++.|+|||||+++||+|. .|..|.+..++.|+|++|+ +
T Consensus 44 ~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~Ss---------------T 107 (370)
T 3psg_A 44 LIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS---------------T 107 (370)
T ss_dssp SSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT---------------T
T ss_pred ccceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCc---------------C
Confidence 35667888 68999999999999999999999999999999 8987666788999999883 2
Q ss_pred CCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC------
Q 019819 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 156 (335)
Q Consensus 83 ~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------ 156 (335)
+ .. ..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||+....+.. +....+|||||||++.
T Consensus 108 ~--~~--~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~-~~~~~~dGIlGLg~~~~s~~~~ 177 (370)
T 3psg_A 108 F--EA--TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETEPGSF-LYYAPFDGILGLAYPSISASGA 177 (370)
T ss_dssp C--EE--EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGG-GGGCSCSEEEECSCGGGCGGGC
T ss_pred c--EE--CCcEEEEEeCCc-eEEEEEEEEEEee----CCcccCCeEEEEEEeecccc-cccCCccceeccCCccccccCC
Confidence 2 22 467999999999 5999999999999 56778999999999875422 1225689999999875
Q ss_pred CchHHHHhhcCcc-cceeeeeeccC--CceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeec-CC
Q 019819 157 ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-KD 230 (335)
Q Consensus 157 ~s~~~ql~~~g~i-~~~Fs~~l~~~--~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~-~~ 230 (335)
.+++++|+++|+| +++||+||.+. .+|.|+|||++ +..+++.|+|+... .+|.|.+++|.++++.+.. ..
T Consensus 178 ~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~~~~ 253 (370)
T 3psg_A 178 TPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE----GYWQITLDSITMDGETIACSGG 253 (370)
T ss_dssp CCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE----TTEEEEECEEESSSSEEECTTC
T ss_pred CCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc----ceeEEEEeEEEECCEEEecCCC
Confidence 4678999999999 89999999853 58999999975 45799999999874 7899999999999988765 45
Q ss_pred CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEe
Q 019819 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 310 (335)
Q Consensus 231 ~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l 310 (335)
..+|+||||+++++|++++++|.+++.+.... ......+|... ..+|+|+|+|+| ++++|
T Consensus 254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~-------~g~~~v~C~~~---------~~lP~i~f~~~g----~~~~l 313 (370)
T 3psg_A 254 CQAIVDTGTSLLTGPTSAIANIQSDIGASENS-------DGEMVISCSSI---------DSLPDIVFTIDG----VQYPL 313 (370)
T ss_dssp EEEEECTTCCSEEEEHHHHHHHHHHTTCEECT-------TCCEECCGGGG---------GGCCCEEEEETT----EEEEE
T ss_pred ceEEEcCCCCcEECCHHHHHHHHHHhCCcccC-------CCcEEEECCCc---------ccCCcEEEEECC----EEEEE
Confidence 78999999999999999999999998654321 11223467653 358999999987 99999
Q ss_pred CCCeEEEEEeCCCEEEEEEec
Q 019819 311 PPEAYLVISVSTSIIIIAYLT 331 (335)
Q Consensus 311 ~~~~y~~~~~~~~~~cl~~~~ 331 (335)
|+++|+++ .+ +.|-++|+.
T Consensus 314 ~~~~yi~~-~~-~~C~~~~~~ 332 (370)
T 3psg_A 314 SPSAYILQ-DD-DSCTSGFEG 332 (370)
T ss_dssp CHHHHEEE-CS-SCEEESEEE
T ss_pred CHHHhccc-CC-CEEEEEEEe
Confidence 99999998 33 344445765
No 4
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=5.5e-47 Score=359.55 Aligned_cols=298 Identities=18% Similarity=0.332 Sum_probs=229.3
Q ss_pred ceeEEeee-----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCC-
Q 019819 7 EFFFFPIF-----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWP- 80 (335)
Q Consensus 7 ~~~~~Pl~-----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~- 80 (335)
+.+.+||. ..|+++|.||||+|++.|+|||||+++||+|. +|. ....|. .+.|.+..|...+.+
T Consensus 8 ~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~~-----~Sst~~----~~~C~s~~C~~~~~~~ 77 (403)
T 3aup_A 8 NLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQY-----SSKTYQ----APFCHSTQCSRANTHQ 77 (403)
T ss_dssp CCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SCC-----CCSSCB----CCCTTBHHHHHTTCCC
T ss_pred ccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC-CCC-----CCCCCC----ccCCCCccccCccccC
Confidence 56789998 58999999999999999999999999999988 551 222333 378998888866532
Q ss_pred -------CCCCCCCCCCCceeEEEeC-CCCeEEEEEEEEEEEeeecCCc-------ccccceEEeceeecCCC-CCCCCC
Q 019819 81 -------NPPRCKHPNDQCDYEIEYG-DGGSSIGALVTDLFPLRFSNGS-------VFNVPLTFGCGYNQHNP-GPLSPP 144 (335)
Q Consensus 81 -------~~~~~~~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~~~~~~g~-------~~~~~~~fg~~~~~~~~-~~~~~~ 144 (335)
..+.|.. +.|.|.+.|+ +++.+.|.+++|+|+|+..+|. ..++++.|||+...... +.. .
T Consensus 78 c~~c~~~~~s~~~~--~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~--~ 153 (403)
T 3aup_A 78 CLSCPAASRPGCHK--NTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLP--R 153 (403)
T ss_dssp EEECSSSCBTTBCS--SEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSS--T
T ss_pred ccccCCCCCCCCCC--CcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCC--C
Confidence 0123433 5899999998 7779999999999999764432 56889999999986422 211 5
Q ss_pred CCceEEeeCCCCCchHHHHhhcCcccceeeeeecc--CCceeEEeCCCCC--C--C-C-----CceeeeceeCCCCCCce
Q 019819 145 DTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGKV--P--S-S-----GVAWTPMLQNSADLKHY 212 (335)
Q Consensus 145 ~~~GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~--~~~g~l~fG~~~~--~--~-~-----~~~~~p~~~~~~~~~~~ 212 (335)
..+||||||++..+++.||.+..+.+++||+||.+ ..+|.|+||+ +. . . | ++.|+|+..++ ..+|
T Consensus 154 ~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~y 230 (403)
T 3aup_A 154 NTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QGEY 230 (403)
T ss_dssp TCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TSCE
T ss_pred CCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC--CCcc
Confidence 78999999999999999997654348999999985 4689999999 42 2 2 4 89999999874 3689
Q ss_pred EEEeeEEEecCEEe-ecCC----------CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCC
Q 019819 213 ILGPAELLYSGKSC-GLKD----------LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGP 281 (335)
Q Consensus 213 ~v~l~~i~v~~~~~-~~~~----------~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 281 (335)
.|.|++|.|+++.+ .++. ..+||||||++++||+++|++|+++|.+.+.. +.++.....+..|+...
T Consensus 231 ~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~c~ 308 (403)
T 3aup_A 231 NVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFNSN 308 (403)
T ss_dssp EECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEECGG
T ss_pred eEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEECC
Confidence 99999999999988 5432 35999999999999999999999999877642 22222222345687631
Q ss_pred cccccccccccccEEEEEcCCCCc--eEEEeCCCeEEEEEeCCCEEEEEEecCC
Q 019819 282 FKALGQVTEYFKPLALSFTNRRNS--VRLVVPPEAYLVISVSTSIIIIAYLTGK 333 (335)
Q Consensus 282 ~~~~~~~~~~~P~i~f~f~g~~~~--~~~~l~~~~y~~~~~~~~~~cl~~~~g~ 333 (335)
.+ +.+|+|+|+|+| + ++|+|++++|+++..+ +..|++|+++.
T Consensus 309 -----~~-~~~P~i~f~f~g---~~~~~~~l~~~~y~~~~~~-~~~C~~~~~~~ 352 (403)
T 3aup_A 309 -----KI-NAYPSVDLVMDK---PNGPVWRISGEDLMVQAQP-GVTCLGVMNGG 352 (403)
T ss_dssp -----GC-CCCCCEEEEESS---TTCCEEEECHHHHEEEC----CEEECEEECC
T ss_pred -----Cc-CcCCcEEEEEcC---CCceEEEEcccceEEEcCC-CeEEEEEEcCC
Confidence 11 258999999998 4 6999999999997543 46788998754
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.5e-47 Score=352.09 Aligned_cols=263 Identities=23% Similarity=0.362 Sum_probs=216.8
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCCCCcee
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~~~~~~~~~~ 94 (335)
..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.++.|+|++|+ ++.. ..|.|
T Consensus 15 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss-----------------T~~~--~~~~~ 73 (325)
T 2apr_A 15 IEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS-----------------TYQA--DGRTW 73 (325)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT-----------------TCEE--EEEEE
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC-----------------Ceee--CCCEE
Confidence 78999999999999999999999999999999 89999 7788999998883 2222 46899
Q ss_pred EEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC-------CchHHHHhhcC
Q 019819 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR-------ISIVSQLREYG 167 (335)
Q Consensus 95 ~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~-------~s~~~ql~~~g 167 (335)
.+.|++|+.+.|.+++|+|+| |+..++++.|||+......+.. ...+||||||++. .+++++|+++|
T Consensus 74 ~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~f~~--~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg 147 (325)
T 2apr_A 74 SISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFAS--GPNDGLLGLGFDTITTVRGVKTPMDNLISQG 147 (325)
T ss_dssp EEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHT--SSCSEEEECSCGGGCSSTTCCCHHHHHHHTT
T ss_pred EEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCccccc--CCCceEEEeCCcccccccCCCCHHHHHHhcC
Confidence 999999988999999999999 4667899999999886543221 3489999999864 35899999999
Q ss_pred cc-cceeeeeec---cCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCCCcEEEecCCcc
Q 019819 168 LI-RNVIGHCIG---QNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASY 241 (335)
Q Consensus 168 ~i-~~~Fs~~l~---~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~iiDtGt~~ 241 (335)
+| +++||+||. ....|.|+||+++ +..+++.|+|+... ..+|.|.+++|.+++ .+......+||||||++
T Consensus 148 ~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~ 223 (325)
T 2apr_A 148 LISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-STVASSFDGILDTGTTL 223 (325)
T ss_dssp SCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-EEEECCEEEEECTTCSS
T ss_pred CCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-EecCCCceEEEecCCcc
Confidence 99 899999994 3568999999975 44789999999754 478999999999999 44445678999999999
Q ss_pred eeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeCCCeEEEEEeC
Q 019819 242 AYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVS 321 (335)
Q Consensus 242 ~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~~~y~~~~~~ 321 (335)
++||+++|++|++++.+.+... .....+|+. ..+|+|+|+|+| .+++||+++|++...
T Consensus 224 ~~lP~~~~~~~~~~~~~~~~~~-------g~~~~~C~~----------~~~p~i~f~f~g----~~~~ip~~~~~~~~~- 281 (325)
T 2apr_A 224 LILPNNIAASVARAYGASDNGD-------GTYTISCDT----------SAFKPLVFSING----ASFQVSPDSLVFEEF- 281 (325)
T ss_dssp EEEEHHHHHHHHHHHTCEECSS-------SCEEECSCG----------GGCCCEEEEETT----EEEEECGGGGEEEEE-
T ss_pred EECCHHHHHHHHHHHhcccCCC-------CeEEEECCC----------CCCCcEEEEECC----EEEEECHHHEEEcCC-
Confidence 9999999999999997765421 112235763 238999999998 599999999998755
Q ss_pred CCEEEEE-Eec
Q 019819 322 TSIIIIA-YLT 331 (335)
Q Consensus 322 ~~~~cl~-~~~ 331 (335)
+..|++ |+.
T Consensus 282 -~~~C~~~i~~ 291 (325)
T 2apr_A 282 -QGQCIAGFGY 291 (325)
T ss_dssp -TTEEEESEEE
T ss_pred -CCeEEEEEEc
Confidence 345665 543
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2e-47 Score=356.35 Aligned_cols=275 Identities=19% Similarity=0.325 Sum_probs=218.4
Q ss_pred eccceeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCcccccCC
Q 019819 4 SWIEFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAAL 77 (335)
Q Consensus 4 ~~~~~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~C~~~ 77 (335)
++...+.+||. ..|+++|+||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 8 ~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss----------- 73 (351)
T 1tzs_A 8 SMDQSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS----------- 73 (351)
T ss_dssp ------CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT-----------
T ss_pred CccCccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc-----------
Confidence 44566678888 68999999999999999999999999999999 897 564 67899998883
Q ss_pred CCCCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCC
Q 019819 78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI 157 (335)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~ 157 (335)
++.. ..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||+....+.. +.....+||||||++..
T Consensus 74 ------T~~~--~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~ 139 (351)
T 1tzs_A 74 ------TYSQ--PGQSFSIQYGTG-SLSGIIGADQVSV----EGLTVVGQQFGESVTEPGQT-FVDAEFDGILGLGYPSL 139 (351)
T ss_dssp ------TCBC--CSCEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGG-GGGCSCSEEEECSCGGG
T ss_pred ------ceEE--CCCEEEEEeCCC-CeEEEEEEeEEEE----CCeEECCeEEEEEEeccccc-cccCCCceEEecCCccc
Confidence 2222 578999999999 5899999999999 56778999999998764421 11256899999999753
Q ss_pred ------chHHHHhhcCcc-cceeeeeeccCC----ceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCE
Q 019819 158 ------SIVSQLREYGLI-RNVIGHCIGQNG----RGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGK 224 (335)
Q Consensus 158 ------s~~~ql~~~g~i-~~~Fs~~l~~~~----~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~ 224 (335)
+++++|+++|+| +++||+||.+.. .|.|+||+++ +..+++.|+|+... .+|.|.+++|.++++
T Consensus 140 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~ 215 (351)
T 1tzs_A 140 AVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ----AYWQIALDNIQVGGT 215 (351)
T ss_dssp SGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE----TTEEEEEEEEEETTE
T ss_pred cccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC----ceEEEEeCEEEECCc
Confidence 588999999999 899999998542 7999999975 34789999999863 789999999999998
Q ss_pred Eeec-CCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC
Q 019819 225 SCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (335)
Q Consensus 225 ~~~~-~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~ 303 (335)
.+.. ....+||||||++++||++++++|.+++.+... .......|+.. ..+|+|+|+|+|
T Consensus 216 ~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~g~~~~~C~~~---------~~~P~i~f~f~g-- 276 (351)
T 1tzs_A 216 VMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV--------DGEYAVECANL---------NVMPDVTFTING-- 276 (351)
T ss_dssp EEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSSEEECGGGG---------GGSCCEEEEETT--
T ss_pred eEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCccc--------CCeEEEeCCCC---------ccCCcEEEEECC--
Confidence 8543 457899999999999999999999999865432 01122468763 358999999977
Q ss_pred CceEEEeCCCeEEEEEeC-CCEEEE-EEec
Q 019819 304 NSVRLVVPPEAYLVISVS-TSIIII-AYLT 331 (335)
Q Consensus 304 ~~~~~~l~~~~y~~~~~~-~~~~cl-~~~~ 331 (335)
++++|++++|+++... ++..|+ +|+.
T Consensus 277 --~~~~i~~~~yi~~~~~~~~~~C~~~~~~ 304 (351)
T 1tzs_A 277 --VPYTLSPTAYTLLDFVDGMQFCSSGFQG 304 (351)
T ss_dssp --EEEEECTTTSEECC-----CCEEESEEE
T ss_pred --EEEEECHHHhEeeccCCCCCeEEEEEEE
Confidence 9999999999997542 234566 6875
No 7
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.3e-47 Score=357.33 Aligned_cols=283 Identities=19% Similarity=0.291 Sum_probs=226.1
Q ss_pred cceeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC---CCCCCCCCCCCCCCCcccCCcccccCCC
Q 019819 6 IEFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALH 78 (335)
Q Consensus 6 ~~~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~---~C~~~~~~~f~p~~S~~~c~~~~C~~~~ 78 (335)
++...+||. ..|+++|+||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 5 g~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~--~~~~y~~~~Ss------------ 69 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCV--GKRFFDPSSSS------------ 69 (361)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCC--SSCCBCGGGCT------------
T ss_pred CccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCC--CCCcCCCccCC------------
Confidence 466778999 68999999999999999999999999999999 898 676 57899998883
Q ss_pred CCCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCC-----CCCCCCCCCceEEeeC
Q 019819 79 WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN-----PGPLSPPDTAGVLGLG 153 (335)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~-----~~~~~~~~~~GIlGLg 153 (335)
++.. ..|.|.+.|++|+ +.|.+++|+|+| |+..++++.|||+....+ .. +.....+||||||
T Consensus 70 -----T~~~--~~~~~~i~Yg~Gs-~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~-~~~~~~~GilGLg 136 (361)
T 1mpp_A 70 -----TFKE--TDYNLNITYGTGG-ANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSP-DSELFLDGIFGAA 136 (361)
T ss_dssp -----TCEE--EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCT-TCSSCCCEEEECS
T ss_pred -----ceEe--cCCeEEEEECCce-EEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccc-cccCCCCCEEEeC
Confidence 2222 4689999999994 899999999999 467789999999998754 21 2225789999999
Q ss_pred CC------------CCchHHHHhhcCcc-cceeeeeeccC-CceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEee
Q 019819 154 RG------------RISIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPA 217 (335)
Q Consensus 154 ~~------------~~s~~~ql~~~g~i-~~~Fs~~l~~~-~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~ 217 (335)
++ ..+++++|+++|+| +++||+||.+. ..|.|+||+++ +..+++.|+|+........+|.|.++
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~ 216 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVT 216 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEE
T ss_pred CcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEe
Confidence 86 34578899999999 89999999864 58999999975 34789999999886421228999999
Q ss_pred EEEecCEEeec-CCCcEE-EecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCccccccccccc-cc
Q 019819 218 ELLYSGKSCGL-KDLTLI-FDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYF-KP 294 (335)
Q Consensus 218 ~i~v~~~~~~~-~~~~~i-iDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~-P~ 294 (335)
+|.++++.+.. ....+| |||||++++||++++++|++++.+... .. ......+|+.. ..+ |+
T Consensus 217 ~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~~---------~~~~p~ 281 (361)
T 1mpp_A 217 GVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSKY---------QDSKTT 281 (361)
T ss_dssp EEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHHH---------TTCCCE
T ss_pred EEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC-CCcEEEECCCc---------ccCCCc
Confidence 99999988743 346899 999999999999999999999866432 11 11123468753 246 99
Q ss_pred EEEEE--cCC-CCceEEEeCCCeEEEEEeCCCEEEE-EEec
Q 019819 295 LALSF--TNR-RNSVRLVVPPEAYLVISVSTSIIII-AYLT 331 (335)
Q Consensus 295 i~f~f--~g~-~~~~~~~l~~~~y~~~~~~~~~~cl-~~~~ 331 (335)
|+|+| ++. +++++++|++++|+++...++..|+ +|+.
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~ 322 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLP 322 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEE
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEe
Confidence 99999 610 1139999999999998654445565 7875
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-47 Score=352.10 Aligned_cols=269 Identities=17% Similarity=0.342 Sum_probs=220.0
Q ss_pred eEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCcccccCCCCCCC
Q 019819 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (335)
Q Consensus 9 ~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~ 82 (335)
+.+||. ..|+++|+||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 2 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss---------------- 62 (324)
T 1am5_A 2 VTEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS---------------- 62 (324)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT----------------
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC----------------
Confidence 457888 79999999999999999999999999999999 897 464 57899998883
Q ss_pred CCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC------
Q 019819 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 156 (335)
Q Consensus 83 ~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------ 156 (335)
++.. ..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||+....+.. +.....+||||||++.
T Consensus 63 -T~~~--~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 63 -TYVE--TGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTEPGPF-QAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp -TCEE--EEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEECCSTT-TTTCSSSEEEECSCGGGCGGGC
T ss_pred -CeEe--CCcEEEEEECCC-CeEEEEEECceeE----CCcEEcccEEEEEEeccccc-ccCCCCceEEecCCccccccCC
Confidence 2222 468999999999 5699999999999 46678999999999875532 1225789999999975
Q ss_pred CchHHHHhhcCcc-cceeeeeeccC--CceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCCC
Q 019819 157 ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (335)
Q Consensus 157 ~s~~~ql~~~g~i-~~~Fs~~l~~~--~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~ 231 (335)
.+++++|+++|+| +++||+||.+. ..|.|+||+++ +..+++.|+|+... .+|.|.+++|.++++.+.....
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~ 209 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACEGC 209 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE----TTEEEEECEEEETTEECCCCCE
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC----cEEEEEEeEEEECCceeeccCc
Confidence 3588999999999 89999999853 48999999975 34789999999863 7899999999999988654447
Q ss_pred cEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeC
Q 019819 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (335)
Q Consensus 232 ~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~ 311 (335)
.+||||||++++||++++++|.+++.+. .. ......+|+.. +.+|+|+|+|+| ++++|+
T Consensus 210 ~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~-------~g~~~~~C~~~---------~~~P~i~f~f~g----~~~~i~ 268 (324)
T 1am5_A 210 QAIVDTGTSKIVAPVSALANIMKDIGAS-EN-------QGEMMGNCASV---------QSLPDITFTING----VKQPLP 268 (324)
T ss_dssp EEEECTTCSSEEECTTTHHHHHHHHTCE-EC-------CCCEECCTTSS---------SSSCCEEEEETT----EEEEEC
T ss_pred eEEEecCCccEECCHHHHHHHHHHhCCc-cc-------CCcEEEeCCCc---------ccCCcEEEEECC----EEEEEC
Confidence 8999999999999999999999998655 21 11223568753 358999999977 999999
Q ss_pred CCeEEEEEeCCCEEEEEEecC
Q 019819 312 PEAYLVISVSTSIIIIAYLTG 332 (335)
Q Consensus 312 ~~~y~~~~~~~~~~cl~~~~g 332 (335)
+++|+++. +..|-++|+..
T Consensus 269 ~~~y~~~~--~~~C~~~~~~~ 287 (324)
T 1am5_A 269 PSAYIEGD--QAFCTSGLGSS 287 (324)
T ss_dssp HHHHEEES--SSCEEECEEEC
T ss_pred HHHhcccC--CCeEEEEEEEC
Confidence 99999975 33444478753
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.9e-47 Score=352.24 Aligned_cols=271 Identities=18% Similarity=0.269 Sum_probs=218.7
Q ss_pred eEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCC
Q 019819 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (335)
Q Consensus 9 ~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~ 84 (335)
..+||. ..|+++|+||||+|++.|+|||||+++||+|. +|..|.+..++.|+|++|+ +
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~Ss-----------------T 64 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACFLHSKYDHEASS-----------------S 64 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT-----------------T
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccCCcCcCCcccCc-----------------C
Confidence 457777 68999999999999999999999999999999 8987333457899998883 2
Q ss_pred CCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCC-CCCCCCCCCceEEeeCCCCC------
Q 019819 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN-PGPLSPPDTAGVLGLGRGRI------ 157 (335)
Q Consensus 85 ~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~-~~~~~~~~~~GIlGLg~~~~------ 157 (335)
+.. +.|.|.+.|++| .+.|.+++|+|+| |+..++++.|||++...+ .+. ....+||||||++..
T Consensus 65 ~~~--~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~f~--~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 65 YKA--NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSEPGLTFA--FGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp CEE--EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCHHHHT--TCSCSEEEECSCGGGCGGGCC
T ss_pred eEE--CCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEecCccccc--cCCcceEEEeCCchhhccCCC
Confidence 222 478999999999 8999999999999 567789999999998643 111 156899999999754
Q ss_pred chHHHHhhcCcc-cceeeeeeccC-----CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC
Q 019819 158 SIVSQLREYGLI-RNVIGHCIGQN-----GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 229 (335)
Q Consensus 158 s~~~ql~~~g~i-~~~Fs~~l~~~-----~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~ 229 (335)
+++.+|+++|+| +++||+||.+. .+|.|+||+++. ..+++.|+|+... .+|.|.+++|.++++.+...
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~ 211 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK----AYWEVKFEGIGLGDEYAELE 211 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEECS
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC----ceEEEEeeeEEECCeEecCC
Confidence 457899999999 89999999742 379999999753 4688999999753 78999999999999988777
Q ss_pred CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEE
Q 019819 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 309 (335)
Q Consensus 230 ~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 309 (335)
+..+||||||++++||++++++|.+++.+... . ......+|+.. ..+|+|+|+|+| ++++
T Consensus 212 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~---------~~~P~i~f~f~g----~~~~ 271 (329)
T 1dpj_A 212 SHGAAIDTGTSLITLPSGLAEMINAEIGAKKG------W-TGQYTLDCNTR---------DNLPDLIFNFNG----YNFT 271 (329)
T ss_dssp SCEEEECTTCSCEEECHHHHHHHHHHHTCEEC------T-TSSEEECGGGG---------GGCCCEEEEETT----EEEE
T ss_pred CccEEeeCCCCcEECCHHHHHHHHHHhCCccC------C-CCeEEEECCCC---------CcCCcEEEEECC----EEEE
Confidence 78999999999999999999999999864311 0 11112246542 358999999987 9999
Q ss_pred eCCCeEEEEEeCCCEEEEEEecC
Q 019819 310 VPPEAYLVISVSTSIIIIAYLTG 332 (335)
Q Consensus 310 l~~~~y~~~~~~~~~~cl~~~~g 332 (335)
|++++|+++.. +.|-++|+..
T Consensus 272 i~~~~y~~~~~--~~C~~~~~~~ 292 (329)
T 1dpj_A 272 IGPYDYTLEVS--GSCISAITPM 292 (329)
T ss_dssp ECTTTSEEEET--TEEEECEEEC
T ss_pred ECHHHhEecCC--CEEEEEEEec
Confidence 99999999753 3443367653
No 10
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=8.8e-48 Score=355.65 Aligned_cols=276 Identities=17% Similarity=0.222 Sum_probs=218.4
Q ss_pred cceeEE-eee--ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCC
Q 019819 6 IEFFFF-PIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (335)
Q Consensus 6 ~~~~~~-Pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~ 82 (335)
++..+. |+. ..|+++|+||||+|++.|+|||||+++||+|. +|..|.+ .++.|+|++|+
T Consensus 3 ~~v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss---------------- 64 (329)
T 1oew_A 3 GSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST---------------- 64 (329)
T ss_dssp EEEEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT----------------
T ss_pred ceeEeeecCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc----------------
Confidence 444455 555 78999999999999999999999999999999 8998877 78899998883
Q ss_pred CCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC------
Q 019819 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ 156 (335)
Q Consensus 83 ~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------ 156 (335)
++... +.|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+....+.+. .....+||||||++.
T Consensus 65 -T~~~~-~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~ 137 (329)
T 1oew_A 65 -TAKLL-SGATWSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSFT-EDSTIDGLLGLAFSTLNTVSP 137 (329)
T ss_dssp -TCEEE-EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBS
T ss_pred -cceec-CCCeEEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEecCcccc-ccCCCceEEEeccccccccCc
Confidence 22111 25799999999977999999999999 567789999999998644321 113679999999864
Q ss_pred ---CchHHHHhhcCcc-cceeeeeeccCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCC
Q 019819 157 ---ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD 230 (335)
Q Consensus 157 ---~s~~~ql~~~g~i-~~~Fs~~l~~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~ 230 (335)
.+++++|.++ | +++||+||.++..|.|+||+++ +..+++.|+|+... ..+|.|.+++|.++++.+....
T Consensus 138 ~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~ 212 (329)
T 1oew_A 138 TQQKTFFDNAKAS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKSTS 212 (329)
T ss_dssp SCCCCHHHHHTTT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEEEE
T ss_pred CCCCCHHHHHHHh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccCCC
Confidence 3578899887 6 8999999987779999999975 45789999999754 4789999999999998765455
Q ss_pred CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEe
Q 019819 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 310 (335)
Q Consensus 231 ~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l 310 (335)
..+||||||++++||++++++|++++.+.... .. ......+|+. .+|+|+|+|+| ++++|
T Consensus 213 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~----~~-~g~~~~~C~~-----------~~P~i~f~fgg----~~~~i 272 (329)
T 1oew_A 213 IDGIADTGTTLLYLPATVVSAYWAQVSGAKSS----SS-VGGYVFPCSA-----------TLPSFTFGVGS----ARIVI 272 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCEEE----TT-TTEEEEETTC-----------CCCCEEEEETT----EEEEE
T ss_pred ceEEEeCCCCCEECCHHHHHHHHHhCCCcEEc----CC-CCEEEEECCC-----------CCCcEEEEECC----EEEEE
Confidence 78999999999999999999999887433211 00 1112246763 47999999965 99999
Q ss_pred CCCeEEEEEeC-CCEEEEE-Eec
Q 019819 311 PPEAYLVISVS-TSIIIIA-YLT 331 (335)
Q Consensus 311 ~~~~y~~~~~~-~~~~cl~-~~~ 331 (335)
|+++|++...+ ++..|++ |+.
T Consensus 273 p~~~~~~~~~~~~~~~C~~~i~~ 295 (329)
T 1oew_A 273 PGDYIDFGPISTGSSSCFGGIQS 295 (329)
T ss_dssp CHHHHEEEESSTTCSEEEESEEE
T ss_pred CHHHeeeeecCCCCCeEEEEEEe
Confidence 99999987533 3456776 654
No 11
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.5e-47 Score=354.18 Aligned_cols=275 Identities=16% Similarity=0.225 Sum_probs=219.6
Q ss_pred eeEE-eee--ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCC
Q 019819 8 FFFF-PIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (335)
Q Consensus 8 ~~~~-Pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~ 84 (335)
.... |.. ..|+++|+||||+|++.|+|||||+++||+|. +|..|.++.++.|+|++|+ +
T Consensus 5 v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss-----------------T 66 (329)
T 3c9x_A 5 APNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS-----------------T 66 (329)
T ss_dssp EEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT-----------------T
T ss_pred eeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc-----------------C
Confidence 3344 444 78999999999999999999999999999999 8998877788999998883 2
Q ss_pred CCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC--------
Q 019819 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR-------- 156 (335)
Q Consensus 85 ~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~-------- 156 (335)
+... +.|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+....+.+. .....+||||||++.
T Consensus 67 ~~~~-~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~~~ 140 (329)
T 3c9x_A 67 SKKV-SGASWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRVSTEFV-QDTVISGLVGLAFDSGNQVRPHP 140 (329)
T ss_dssp CEEC-TTCBEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBSSC
T ss_pred ceEc-CCCeEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEecCcccc-ccCCCceeEEeCcccccccCCCC
Confidence 2221 36799999999977999999999999 466789999999998644321 113679999999864
Q ss_pred -CchHHHHhhcCcc-cceeeeeeccCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCCCc
Q 019819 157 -ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLT 232 (335)
Q Consensus 157 -~s~~~ql~~~g~i-~~~Fs~~l~~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~ 232 (335)
.+++++|.++ | +++||+||.++..|.|+||+++ +..+++.|+|+... ..+|.|.+++|.++++.+......
T Consensus 141 ~~~~~~~l~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~ 215 (329)
T 3c9x_A 141 QKTWFSNAASS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLNRNSID 215 (329)
T ss_dssp CCCHHHHHHTT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCCSCCEE
T ss_pred CCCHHHHHHHh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEeccCCCce
Confidence 3578899876 6 8999999987779999999985 45799999999754 478999999999999877655678
Q ss_pred EEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeCC
Q 019819 233 LIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPP 312 (335)
Q Consensus 233 ~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~ 312 (335)
+||||||++++||++++++|++++.+.... .. ......+|+. .+|+|+|+|+| ++++||+
T Consensus 216 aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~----~~-~~~~~~~C~~-----------~~P~i~f~f~g----~~~~ip~ 275 (329)
T 3c9x_A 216 GIADTGTTLLLLDDNVVDAYYANVQSAQYD----NQ-QEGVVFDCDE-----------DLPSFSFGVGS----STITIPG 275 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTCTTCEEE----TT-TTEEEEETTC-----------CCCCEEEEETT----EEEEECG
T ss_pred EEEECCCCcEeCCHHHHHHHHHhCCCcEEc----CC-CCEEEEECCC-----------CCCcEEEEECC----EEEEECH
Confidence 999999999999999999999887433211 10 1112235763 47999999987 9999999
Q ss_pred CeEEEEEeC-CCEEEEE-Eec
Q 019819 313 EAYLVISVS-TSIIIIA-YLT 331 (335)
Q Consensus 313 ~~y~~~~~~-~~~~cl~-~~~ 331 (335)
++|++...+ ++..|++ |+.
T Consensus 276 ~~~~~~~~~~~~~~C~~~i~~ 296 (329)
T 3c9x_A 276 DLLNLTPLEEGSSTCFGGLQS 296 (329)
T ss_dssp GGGEEEESSTTCSEEEESEEE
T ss_pred HHeeeeccCCCCCeEEEEEEc
Confidence 999987533 3456776 664
No 12
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=9.9e-48 Score=361.29 Aligned_cols=271 Identities=16% Similarity=0.276 Sum_probs=220.1
Q ss_pred eeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC----CCCCCCCCCCCCCCCcccCCcccccCCCC
Q 019819 8 FFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAALHW 79 (335)
Q Consensus 8 ~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~----~C~~~~~~~f~p~~S~~~c~~~~C~~~~~ 79 (335)
...+||. ..|+++|+||||||++.|+|||||+++||+|. .|. .|. .|+.|+|++|+
T Consensus 50 ~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~Ss------------- 113 (383)
T 2x0b_A 50 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------------- 113 (383)
T ss_dssp -CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGCT-------------
T ss_pred cceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCCC-------------
Confidence 4568888 78999999999999999999999999999999 896 575 56899998883
Q ss_pred CCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCC--
Q 019819 80 PNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI-- 157 (335)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 157 (335)
++.. +.|.|.+.|++| ++.|.+++|+|+| |+..++ +.|||+....+.. +....+|||||||++..
T Consensus 114 ----T~~~--~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~g~~-f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 114 ----SYKH--NGTELTLRYSTG-TVSGFLSQDIITV----GGITVT-QMFGEVTEMPALP-FMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp ----TCEE--EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECCHHH-HTTCSSSEEEECSCGGGCG
T ss_pred ----cEEE--CCcEEEEEcCCc-cEEEEEEeeEEEE----cCceEE-EEEEEEEecCCcc-cccCCCceEeccCCCcccc
Confidence 2222 578999999999 5999999999999 566788 9999999874421 11257899999999754
Q ss_pred ----chHHHHhhcCcc-cceeeeeeccC------CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCE
Q 019819 158 ----SIVSQLREYGLI-RNVIGHCIGQN------GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGK 224 (335)
Q Consensus 158 ----s~~~ql~~~g~i-~~~Fs~~l~~~------~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~ 224 (335)
+++++|.++|+| +++||+||.+. .+|.|+|||++. ..+++.|+|+.. ..+|.|.+++|.++++
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~~~ 256 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSS 256 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEESSC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeCCc
Confidence 578999999999 89999999843 389999999763 468999999975 3799999999999998
Q ss_pred Eeec-CCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC
Q 019819 225 SCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (335)
Q Consensus 225 ~~~~-~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~ 303 (335)
.+.. ....+|+||||+++++|++++++|.+++.+.. . .......|+.. +.+|+|+|+|+|
T Consensus 257 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-~-------~g~~~v~C~~~---------~~~P~i~f~~~g-- 317 (383)
T 2x0b_A 257 TLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-R-------LFDYVVKCNEG---------PTLPDISFHLGG-- 317 (383)
T ss_dssp CCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-C-------SSCEEEEGGGT---------TTCCCEEEEETT--
T ss_pred eEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-c-------CCcEEEecccc---------ccCceEEEEECC--
Confidence 7533 45789999999999999999999999986543 1 11223468763 358999999987
Q ss_pred CceEEEeCCCeEEEEEeC-CCEEEE-EEecC
Q 019819 304 NSVRLVVPPEAYLVISVS-TSIIII-AYLTG 332 (335)
Q Consensus 304 ~~~~~~l~~~~y~~~~~~-~~~~cl-~~~~g 332 (335)
++++|++++|+++... ++..|+ +|+..
T Consensus 318 --~~~~l~~~~yi~~~~~~~~~~C~~~~~~~ 346 (383)
T 2x0b_A 318 --KEYTLTSADYVFQESYSSKKLCTLAIHAM 346 (383)
T ss_dssp --EEEEECHHHHBCCCCCCTTSEEEBSEEEC
T ss_pred --EEEEECHHHhEeeccCCCCCeEEEEEEec
Confidence 9999999999987543 234666 68753
No 13
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.9e-47 Score=351.41 Aligned_cols=268 Identities=18% Similarity=0.299 Sum_probs=216.2
Q ss_pred eeEEeee---ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCC-CCCCC-------CCCCCCCCCCCCCcccCCcccccC
Q 019819 8 FFFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDA-PCTGC-------TKPPEKQYKPHKNIVPCSNPRCAA 76 (335)
Q Consensus 8 ~~~~Pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~-~c~~C-------~~~~~~~f~p~~S~~~c~~~~C~~ 76 (335)
.+.+||. ..|+++|+||||+|++.|+|||||+++||+|.. +|..| .+..++.|+|++|+
T Consensus 2 ~~~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss---------- 71 (334)
T 1j71_A 2 DVPTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSS---------- 71 (334)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCT----------
T ss_pred ceeEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCC----------
Confidence 5788998 789999999999999999999999999998531 35533 12357789998873
Q ss_pred CCCCCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC
Q 019819 77 LHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR 156 (335)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~ 156 (335)
++.. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+... ...+||||||++.
T Consensus 72 -------T~~~--~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~~~~~~fg~~~~~--------~~~~GilGLg~~~ 130 (334)
T 1j71_A 72 -------SAQN--LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTT--------SVDQGIMGIGFTA 130 (334)
T ss_dssp -------TCEE--EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECSCGG
T ss_pred -------Cccc--CCCceEEEECCCCEEEEEEEEEEEEE----CCEEEccEEEEEEEec--------CCCccEEEEcCCc
Confidence 2222 46899999999988899999999999 4667899999999986 3579999999975
Q ss_pred C--------chHHHHhhcCcc-cceeeeeecc--CCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecC
Q 019819 157 I--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSG 223 (335)
Q Consensus 157 ~--------s~~~ql~~~g~i-~~~Fs~~l~~--~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~ 223 (335)
. +++.+|+++|+| +++||+||.+ ...|.|+||+++ +..+++.|+|+..+ .+|.|.+++|.+++
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g 206 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFDG 206 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEETT
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEEECC
Confidence 3 889999999999 8999999974 468999999974 34688999999864 68999999999999
Q ss_pred EEeecCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCC-CccccCCcccccccccccccEEEEEcCC
Q 019819 224 KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL-PICWRGPFKALGQVTEYFKPLALSFTNR 302 (335)
Q Consensus 224 ~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~P~i~f~f~g~ 302 (335)
+.+.. +..+||||||++++||++++++|++++.+.... . ..... .+|+. +|.|+|+|.|
T Consensus 207 ~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~-~~~~~~~~C~~------------~p~i~f~f~~- 266 (334)
T 1j71_A 207 TSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWDS-----R-NEIYRLPSCDL------------SGDAVFNFDQ- 266 (334)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET-----T-TTEEECSSSCC------------CSEEEEEEST-
T ss_pred EeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC-----C-CceEEEEcCCC------------CCceEEEEcC-
Confidence 98864 468999999999999999999999999765531 0 11122 56753 6999999965
Q ss_pred CCceEEEeCCCeEEEEEeCCCEEEEEEecC
Q 019819 303 RNSVRLVVPPEAYLVISVSTSIIIIAYLTG 332 (335)
Q Consensus 303 ~~~~~~~l~~~~y~~~~~~~~~~cl~~~~g 332 (335)
+++++||+++|+++..++..|-++|+.+
T Consensus 267 --g~~~~i~~~~y~~~~~~~~~C~~~i~~~ 294 (334)
T 1j71_A 267 --GVKITVPLSELILKDSDSSICYFGISRN 294 (334)
T ss_dssp --TCEEEEEGGGGEEECSSSSCEEESEEEC
T ss_pred --CcEEEECHHHheeecCCCCeeEEEEeEC
Confidence 4999999999999854433433346543
No 14
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=3.2e-47 Score=351.09 Aligned_cols=272 Identities=19% Similarity=0.296 Sum_probs=219.1
Q ss_pred ceeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCcccccCCCCC
Q 019819 7 EFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (335)
Q Consensus 7 ~~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~ 80 (335)
+...+||. ..|+++|+||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 2 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss-------------- 64 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS-------------- 64 (323)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT--------------
T ss_pred CcceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC--------------
Confidence 45567888 68999999999999999999999999999999 894 565 57899998883
Q ss_pred CCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC----
Q 019819 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR---- 156 (335)
Q Consensus 81 ~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~---- 156 (335)
++.. ..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||+....+.. +.....+||||||++.
T Consensus 65 ---T~~~--~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~ 133 (323)
T 3cms_A 65 ---TFQN--LGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQEPGDF-FTYAEFDGILGMAYPSLASE 133 (323)
T ss_dssp ---TCEE--EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHH-HHHSSCSEEEECSCGGGSCT
T ss_pred ---CeEE--CCcEEEEEeCCC-CeEEEEEEEEEEE----CCeEEeccEEEEEEeccccc-ccccCCceEEecCcchhhcc
Confidence 2222 478999999999 5899999999999 56778999999999864311 1113679999999864
Q ss_pred --CchHHHHhhcCcc-cceeeeeeccC-CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeec-C
Q 019819 157 --ISIVSQLREYGLI-RNVIGHCIGQN-GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-K 229 (335)
Q Consensus 157 --~s~~~ql~~~g~i-~~~Fs~~l~~~-~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~-~ 229 (335)
.+++++|+++++| +++||+||.+. ..|.|+||+++. ..+++.|+|+... .+|.|.+++|.++++.+.+ .
T Consensus 134 ~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~ 209 (323)
T 3cms_A 134 YSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ----QYWQFTVDSVTISGVVVACEG 209 (323)
T ss_dssp TCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEESTT
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC----CeEEEEEeeEEECCEEeecCC
Confidence 4689999999999 89999999853 459999999753 3588999999753 7899999999999998764 3
Q ss_pred CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEE
Q 019819 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 309 (335)
Q Consensus 230 ~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 309 (335)
...+||||||++++||++++++|.+++.+.... ......+|+.. +.+|+|+|+|+| ++++
T Consensus 210 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~g~~~~~C~~~---------~~~P~i~f~f~g----~~~~ 269 (323)
T 3cms_A 210 GCQAILDTGTSKLVGPSSDILNIQQAIGATQNQ-------YGEFDIDCDNL---------SYMPTVVFEING----KMYP 269 (323)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHHHHTCEEET-------TTEEEECTTCT---------TTSCCEEEEETT----EEEE
T ss_pred CcEEEEecCCccEeCCHHHHHHHHHHhCCeecC-------CCcEEEECCCC---------ccCceEEEEECC----EEEE
Confidence 578999999999999999999999998653221 11122468753 358999999977 9999
Q ss_pred eCCCeEEEEEeCCCEEEEEEecC
Q 019819 310 VPPEAYLVISVSTSIIIIAYLTG 332 (335)
Q Consensus 310 l~~~~y~~~~~~~~~~cl~~~~g 332 (335)
|++++|+++ . +..|-++|+..
T Consensus 270 i~~~~y~~~-~-~~~C~~~i~~~ 290 (323)
T 3cms_A 270 LTPSAYTSQ-D-QGFCTSGFQSE 290 (323)
T ss_dssp ECHHHHEEE-E-TTEEEESEEEC
T ss_pred ECHHHhccC-C-CCEEEEEEEeC
Confidence 999999998 2 23444468753
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.4e-47 Score=351.06 Aligned_cols=266 Identities=20% Similarity=0.362 Sum_probs=216.8
Q ss_pred Eeee---ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCC--CCCCCCCCCCCCCCcccCCcccccCCCCCCCCCC
Q 019819 11 FPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTG--CTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRC 85 (335)
Q Consensus 11 ~Pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~--C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~ 85 (335)
+||. ..|+++|+||||+|++.|+|||||+++||+|. +|.. |. .++.|+|++|+ ++
T Consensus 5 ~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss-----------------T~ 64 (329)
T 1htr_B 5 EPMAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSESS-----------------TY 64 (329)
T ss_dssp CGGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT-----------------TC
T ss_pred eeeEEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccCC-----------------Ce
Confidence 5555 78999999999999999999999999999999 8974 64 57899998883 22
Q ss_pred CCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCC------ch
Q 019819 86 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI------SI 159 (335)
Q Consensus 86 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~ 159 (335)
.. ..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||+....+.. +.....+||||||++.. ++
T Consensus 65 ~~--~~~~~~i~Yg~g-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~ 136 (329)
T 1htr_B 65 ST--NGQTFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENEPGTN-FVYAQFDGIMGLAYPALSVDEATTA 136 (329)
T ss_dssp EE--EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSCSSGG-GGGCSCCEEEECCCCSCCCTTCCSH
T ss_pred EE--CCcEEEEEeCCC-CeEEEEEeeeEEE----cceEECceEEEEEEEccccc-cccCCCceEEecCCCcccccCCCCH
Confidence 22 468999999999 5699999999999 56778999999999864421 11256899999999754 58
Q ss_pred HHHHhhcCcc-cceeeeeeccCC---ceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEee--cCCC
Q 019819 160 VSQLREYGLI-RNVIGHCIGQNG---RGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG--LKDL 231 (335)
Q Consensus 160 ~~ql~~~g~i-~~~Fs~~l~~~~---~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~--~~~~ 231 (335)
+++|+++|+| +++||+||.+.. .|.|+||+++. ..+++.|+|+.. ..+|.|.+++|.++++.+. ....
T Consensus 137 ~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~ 212 (329)
T 1htr_B 137 MQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQASGWCSEGC 212 (329)
T ss_dssp HHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTEECCTTTTCE
T ss_pred HHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCceeeecCCCc
Confidence 9999999999 899999998543 79999999753 368899999975 3789999999999998865 3457
Q ss_pred cEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeC
Q 019819 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (335)
Q Consensus 232 ~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~ 311 (335)
.+||||||++++||++++++|.+++.+.... .......|+.. +.+|+|+|+|+| ++++|+
T Consensus 213 ~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~-------~g~~~~~C~~~---------~~~P~i~f~f~g----~~~~i~ 272 (329)
T 1htr_B 213 QAIVDTGTSLLTVPQQYMSALLQATGAQEDE-------YGQFLVNCNSI---------QNLPSLTFIING----VEFPLP 272 (329)
T ss_dssp EEEECTTCCSEEEEGGGHHHHHHHHTCEECT-------TSCEEECGGGG---------GGSCCEEEEETT----EEEEEC
T ss_pred eEEEecCCccEECCHHHHHHHHHHhCCeecC-------CCeEEEeCCCc---------ccCCcEEEEECC----EEEEEC
Confidence 8999999999999999999999998654321 11223468753 358999999977 999999
Q ss_pred CCeEEEEEeCCCEEEE-EEec
Q 019819 312 PEAYLVISVSTSIIII-AYLT 331 (335)
Q Consensus 312 ~~~y~~~~~~~~~~cl-~~~~ 331 (335)
+++|+++.. + .|+ +|+.
T Consensus 273 ~~~y~~~~~--g-~C~~~~~~ 290 (329)
T 1htr_B 273 PSSYILSNN--G-YCTVGVEP 290 (329)
T ss_dssp HHHHEEECS--S-CEEESEEE
T ss_pred HHHhcccCC--C-EEEEEEEE
Confidence 999999754 3 566 6865
No 16
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.5e-47 Score=349.11 Aligned_cols=270 Identities=19% Similarity=0.264 Sum_probs=215.7
Q ss_pred EEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCC
Q 019819 10 FFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRC 85 (335)
Q Consensus 10 ~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~ 85 (335)
.+||+ ..|+++|+||||+|+++|++||||+++||+|. +|..|.+..++.|+|++|+ ++
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss-----------------T~ 63 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS-----------------TF 63 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT-----------------TC
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc-----------------Ce
Confidence 35777 68999999999999999999999999999999 8985444567899998883 22
Q ss_pred CCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC------Cch
Q 019819 86 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISI 159 (335)
Q Consensus 86 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------~s~ 159 (335)
.. ..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||+....+.. +.....+||||||++. .++
T Consensus 64 ~~--~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~s~~~~~~~ 135 (320)
T 4aa9_A 64 RN--LGKPLSIHYGTG-SMEGFLGYDTVTV----SNIVDPNQTVGLSTEQPGEV-FTYSEFDGILGLAYPSLASEYSVPV 135 (320)
T ss_dssp EE--EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHH-HHSCCCSEEEECSCGGGSCTTCCCH
T ss_pred Ec--CCcEEEEEECCc-EEEEEEEEEEEEE----CCEeecCeEEEEEEEccccc-ccccCcccEEecCcccccccCCCCH
Confidence 22 467999999999 5899999999999 56778999999999875421 1114579999999863 568
Q ss_pred HHHHhhcCcc-cceeeeeecc-CCceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC-CCcEE
Q 019819 160 VSQLREYGLI-RNVIGHCIGQ-NGRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-DLTLI 234 (335)
Q Consensus 160 ~~ql~~~g~i-~~~Fs~~l~~-~~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~-~~~~i 234 (335)
+++|.++|+| +++||+||.+ ...|.|+||+++. ..+++.|+|+.. ..+|.|.+++|.++++.+..+ ...++
T Consensus 136 ~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~~~~i 211 (320)
T 4aa9_A 136 FDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACVGGCQAI 211 (320)
T ss_dssp HHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEESTTCEEEE
T ss_pred HHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccCCCcEEE
Confidence 9999999999 9999999986 4789999999753 468999999975 378999999999999988653 57899
Q ss_pred EecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeCCCe
Q 019819 235 FDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEA 314 (335)
Q Consensus 235 iDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~~~ 314 (335)
|||||++++||++++++|.+++.+.... ......+|+.. ..+|+|+|+|+| ++++|++++
T Consensus 212 iDsGtt~~~lP~~~~~~i~~~~~~~~~~-------~g~~~~~C~~~---------~~~p~i~f~f~g----~~~~l~~~~ 271 (320)
T 4aa9_A 212 LDTGTSVLFGPSSDILKIQMAIGATENR-------YGEFDVNCGNL---------RSMPTVVFEING----RDYPLSPSA 271 (320)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHTTCEECT-------TSCEEECGGGG---------GGCCCEEEEETT----EEEEECHHH
T ss_pred EECCCCcEECCHHHHHHHHHHhCCcccC-------CCcEEEeCCCC---------CcCceEEEEECC----EEEEECHHH
Confidence 9999999999999999999998554321 11223467653 358999999987 999999999
Q ss_pred EEEEEeCCCEEEEEEec
Q 019819 315 YLVISVSTSIIIIAYLT 331 (335)
Q Consensus 315 y~~~~~~~~~~cl~~~~ 331 (335)
|+.+ . +..|-++|+.
T Consensus 272 y~~~-~-~~~C~~~i~~ 286 (320)
T 4aa9_A 272 YTSK-D-QGFCTSGFQG 286 (320)
T ss_dssp HEEE-E-TTEEEESEEE
T ss_pred hccC-C-CCeEEEEEEc
Confidence 9976 2 2344446765
No 17
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.7e-46 Score=347.16 Aligned_cols=268 Identities=18% Similarity=0.280 Sum_probs=220.6
Q ss_pred eeEEeee---ceEEEEEEeCCCCcEEEEEEeCCCCceeEe-----CCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCC
Q 019819 8 FFFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQ-----CDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHW 79 (335)
Q Consensus 8 ~~~~Pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~-----~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~ 79 (335)
.+.+||. ..|+++|+||||+|++.|+|||||+++||+ |. +|..|. .++.|+|++|+
T Consensus 2 ~i~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~Ss------------- 65 (339)
T 3fv3_A 2 SISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSS------------- 65 (339)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCT-------------
T ss_pred ceeeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCc-------------
Confidence 4788998 789999999999999999999999999998 65 566776 57899998883
Q ss_pred CCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCC--
Q 019819 80 PNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI-- 157 (335)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 157 (335)
+++ . ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+.... ..+||||||++..
T Consensus 66 --T~~--~--~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~--------~~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 66 --SYK--N--LGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQTS--------VDQGILGIGYTSNEA 127 (339)
T ss_dssp --TCE--E--EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES--------SSSCEEECSCGGGCC
T ss_pred --cee--e--CCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEecC--------CCceeEEecCccccc
Confidence 221 2 46799999999999999999999999 56778999999999873 3699999998653
Q ss_pred --------------chHHHHhhcCcc-cceeeeeeccC--CceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeE
Q 019819 158 --------------SIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAE 218 (335)
Q Consensus 158 --------------s~~~ql~~~g~i-~~~Fs~~l~~~--~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~ 218 (335)
+++.+|.++|+| +++||+||.+. ..|.|+||+++ +..+++.|+|+... .+|.|.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~ 203 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTISLAS 203 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC----ccEEEEEEE
Confidence 389999999999 89999999743 58999999864 45789999999864 689999999
Q ss_pred EEecCEEeecCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEE
Q 019819 219 LLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALS 298 (335)
Q Consensus 219 i~v~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~ 298 (335)
|.++++.+.. ...++|||||++++||++++++|++++.+..... ... ......+|+. ..+|+|+|+
T Consensus 204 i~v~g~~~~~-~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~-~~~~~~~C~~----------~~~p~i~f~ 269 (339)
T 3fv3_A 204 VNLKGSSFSF-GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--ARD-QYLYFIDCNT----------DTSGTTVFN 269 (339)
T ss_dssp EEESSCEEEE-EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--ETT-EEEEEECTTC----------CCCSEEEEE
T ss_pred EEECCEeecC-CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--ccc-CceEEEecCC----------CCCCcEEEE
Confidence 9999998875 3689999999999999999999999998654310 000 1112346764 247999999
Q ss_pred EcCCCCceEEEeCCCeEEEEEeCCCEEEEEEec
Q 019819 299 FTNRRNSVRLVVPPEAYLVISVSTSIIIIAYLT 331 (335)
Q Consensus 299 f~g~~~~~~~~l~~~~y~~~~~~~~~~cl~~~~ 331 (335)
|++ +++++||+++|+++.. .+.|+++|++
T Consensus 270 f~~---g~~~~v~~~~~~~~~~-~~~C~~~i~~ 298 (339)
T 3fv3_A 270 FGN---GAKITVPNTEYVYQNG-DGTCLWGIQP 298 (339)
T ss_dssp ETT---SCEEEEEGGGGEEECS-SSCEEESEEE
T ss_pred ECC---CCEEEECHHHheeeCC-CCeEEEEEEe
Confidence 975 4999999999999753 3467788876
No 18
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2e-46 Score=346.02 Aligned_cols=274 Identities=17% Similarity=0.217 Sum_probs=220.6
Q ss_pred ccceeEEeee--ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCC
Q 019819 5 WIEFFFFPIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (335)
Q Consensus 5 ~~~~~~~Pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~ 82 (335)
.++....|+. ..|+++|+|| +|++.|+|||||+++||+|. +|..|.++.++.|+|++|+
T Consensus 2 ~~~v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss---------------- 62 (325)
T 1ibq_A 2 KGSAVTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA---------------- 62 (325)
T ss_dssp CEEEEEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC----------------
T ss_pred CceEEeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC----------------
Confidence 4566677777 8999999999 89999999999999999999 8998877788999999882
Q ss_pred CCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCC-----
Q 019819 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI----- 157 (335)
Q Consensus 83 ~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~----- 157 (335)
+.. +.|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+....+.+. .....+||||||++..
T Consensus 63 --~~~--~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~p 133 (325)
T 1ibq_A 63 --TKL--SGYSWDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKISSEFV-QDTANDGLLGLAFSSINTVQP 133 (325)
T ss_dssp --EEC--TTCBEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH-TSTTCCEEEECSCGGGCCCBS
T ss_pred --Ccc--CCCEEEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEecCcccc-ccCCCceEEEeCcccccccCc
Confidence 111 46799999999977999999999999 467789999999998654321 1136899999998643
Q ss_pred ----chHHHHhhcCcc-cceeeeeeccCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCC
Q 019819 158 ----SIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD 230 (335)
Q Consensus 158 ----s~~~ql~~~g~i-~~~Fs~~l~~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~ 230 (335)
+++++|.++ + +++||+||.++..|.|+||+++ +..+++.|+|+... ..+|.|.+++|.++++.+....
T Consensus 134 ~~~~~~~~~l~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~~ 208 (325)
T 1ibq_A 134 KAQTTFFDTVKSQ--LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSSSSG 208 (325)
T ss_dssp SCCCCHHHHHGGG--SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCBSCC
T ss_pred CCCCCHHHHHHHh--cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeeccCCC
Confidence 478999887 6 8999999987678999999985 44799999999754 4789999999999998776556
Q ss_pred CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEe
Q 019819 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVV 310 (335)
Q Consensus 231 ~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l 310 (335)
..+||||||++++||++++++|++++.+.... .. ......+|+. .+|+|+|+|+| ++++|
T Consensus 209 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~----~~-~g~~~~~C~~-----------~~P~i~f~fgg----~~~~i 268 (325)
T 1ibq_A 209 FSAIADTGTTLILLDDEIVSAYYEQVSGAQES----YE-AGGYVFSCST-----------DLPDFTVVIGD----YKAVV 268 (325)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCBCC----SS-SSSCEEETTC-----------CCCCEEEEETT----EEEEE
T ss_pred ceEEEeCCCCcEeCCHHHHHHHHHhCCCceEc----Cc-CCeEEEEcCC-----------CCCcEEEEECC----EEEEE
Confidence 78999999999999999999999988432211 10 1112235763 47999999966 99999
Q ss_pred CCCeEEEEEeC-CCEEEEE-Eec
Q 019819 311 PPEAYLVISVS-TSIIIIA-YLT 331 (335)
Q Consensus 311 ~~~~y~~~~~~-~~~~cl~-~~~ 331 (335)
|+++|++...+ ++..|++ |+.
T Consensus 269 ~~~~~~~~~~~~~~~~C~~~i~~ 291 (325)
T 1ibq_A 269 PGKYINYAPVSTGSSTCYGGIQS 291 (325)
T ss_dssp CHHHHEEEESSTTCSEEEESEEE
T ss_pred CHHHhcccccCCCCCeEEEEEEc
Confidence 99999987543 4356776 664
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.5e-46 Score=347.82 Aligned_cols=270 Identities=19% Similarity=0.316 Sum_probs=215.0
Q ss_pred eeEEeee---ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCC-CCCCC-------CCCCCCCCCCCCCcccCCcccccC
Q 019819 8 FFFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDA-PCTGC-------TKPPEKQYKPHKNIVPCSNPRCAA 76 (335)
Q Consensus 8 ~~~~Pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~-~c~~C-------~~~~~~~f~p~~S~~~c~~~~C~~ 76 (335)
.+.+||. ..|+++|+||||+|++.|+|||||+++||+|.. +|..| .+..++.|+|++|+
T Consensus 2 ~v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss---------- 71 (342)
T 2qzx_A 2 PVAVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSR---------- 71 (342)
T ss_dssp CEEEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCT----------
T ss_pred ceeEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCC----------
Confidence 4678888 789999999999999999999999999998531 36533 12357789998873
Q ss_pred CCCCCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC
Q 019819 77 LHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR 156 (335)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~ 156 (335)
++.. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+... ...+||||||+..
T Consensus 72 -------T~~~--~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~--------~~~~GilGLg~~~ 130 (342)
T 2qzx_A 72 -------TSQN--LNTRFDIKYGDGSYAKGKLYKDTVGI----GGVSVRDQLFANVWST--------SARKGILGIGFQS 130 (342)
T ss_dssp -------TCEE--EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------CSSSCEEECSCGG
T ss_pred -------Cccc--CCCcEEEEeCCCCeEEEEEEEEEEEE----CCEEecceEEEEEEec--------CCCcCEEEEcccc
Confidence 2222 46899999999988899999999999 4667899999999986 3579999999975
Q ss_pred C--------chHHHHhhcCcc-cceeeeeecc--CCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecC
Q 019819 157 I--------SIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSG 223 (335)
Q Consensus 157 ~--------s~~~ql~~~g~i-~~~Fs~~l~~--~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~ 223 (335)
. +++.+|+++|+| +++||+||.+ ...|.|+||+++ +..+++.|+|+..+ .+|.|.+++|.+++
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g 206 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSVNVRG 206 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETT
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEEEECC
Confidence 3 889999999999 8999999974 468999999974 45789999999864 68999999999999
Q ss_pred EEeecCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC
Q 019819 224 KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (335)
Q Consensus 224 ~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~ 303 (335)
+.+.. +..+||||||++++||++++++|++++.+.... .+........+|+. +|+|+|+|.|
T Consensus 207 ~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C~~------------~p~i~f~f~~-- 268 (342)
T 2qzx_A 207 RNVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADCKT------------SGTIDFQFGN-- 268 (342)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECTTC------------CCEEEEEETT--
T ss_pred EecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEECCC------------CCcEEEEECC--
Confidence 98864 468999999999999999999999999776531 01001012235643 6999999965
Q ss_pred CceEEEeCCCeEEEEEe----CCCEEEEE-Eec
Q 019819 304 NSVRLVVPPEAYLVISV----STSIIIIA-YLT 331 (335)
Q Consensus 304 ~~~~~~l~~~~y~~~~~----~~~~~cl~-~~~ 331 (335)
+++++||+++|+++.. +++..|++ |+.
T Consensus 269 -g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~ 300 (342)
T 2qzx_A 269 -NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRE 300 (342)
T ss_dssp -TEEEEEEGGGGEECCBCTTSCBCSSEEESEEE
T ss_pred -CcEEEEcHHHhcccccccCCCCCCccEEEEec
Confidence 4999999999999742 22245665 554
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.9e-46 Score=346.49 Aligned_cols=258 Identities=19% Similarity=0.310 Sum_probs=210.7
Q ss_pred eeEEeee---ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCC--CCCC-------CCCCCCCCCCCCCcccCCccccc
Q 019819 8 FFFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAP--CTGC-------TKPPEKQYKPHKNIVPCSNPRCA 75 (335)
Q Consensus 8 ~~~~Pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~--c~~C-------~~~~~~~f~p~~S~~~c~~~~C~ 75 (335)
.+.+||. ..|+++|+||||+|++.|++||||+++||++. . |..| .+..++.|+|++|+
T Consensus 2 ~v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~~~~~y~~~~Ss--------- 71 (342)
T 3pvk_A 2 AVPVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCKQKGTYDPSGSS--------- 71 (342)
T ss_dssp CEEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGGTTCCBCGGGCT---------
T ss_pred CcceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCCCCCcCCCccCc---------
Confidence 3567887 78999999999999999999999999999865 3 5322 11257889998873
Q ss_pred CCCCCCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCC
Q 019819 76 ALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRG 155 (335)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~ 155 (335)
++ .. ..|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+... ...+||||||++
T Consensus 72 ------T~--~~--~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~--------~~~~GilGLg~~ 129 (342)
T 3pvk_A 72 ------AS--QD--LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDST--------SIDQGILGVGYK 129 (342)
T ss_dssp ------TC--EE--EEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECSCG
T ss_pred ------ce--ee--cCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEcc--------CCCccEEEecCc
Confidence 22 12 46799999999988999999999999 5677899999999886 357999999997
Q ss_pred C-------CchHHHHhhcCcc-cceeeeeecc--CCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecC
Q 019819 156 R-------ISIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSG 223 (335)
Q Consensus 156 ~-------~s~~~ql~~~g~i-~~~Fs~~l~~--~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~ 223 (335)
. .+++.+|+++|+| +++||+||.+ ...|.|+||+++ +..+++.|+|+... .+|.|.+++|.+++
T Consensus 130 ~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g 205 (342)
T 3pvk_A 130 TNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSVEVSG 205 (342)
T ss_dssp GGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETT
T ss_pred cccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEEEECC
Confidence 6 5799999999999 8999999974 357999999864 45789999999864 58999999999999
Q ss_pred EEeecCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC
Q 019819 224 KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR 303 (335)
Q Consensus 224 ~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~ 303 (335)
+.+...+..+||||||++++||++++++|.+++.+..... .........+|+. +|+|+|+|++
T Consensus 206 ~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~------------~p~i~f~f~~-- 268 (342)
T 3pvk_A 206 KTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCNL------------SGDVVFNFSK-- 268 (342)
T ss_dssp EEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSCC------------CSEEEEEEST--
T ss_pred EEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecCC------------CCceEEEECC--
Confidence 9988766789999999999999999999999997665311 0000012345653 5999999986
Q ss_pred CceEEEeCCCeEEEEE
Q 019819 304 NSVRLVVPPEAYLVIS 319 (335)
Q Consensus 304 ~~~~~~l~~~~y~~~~ 319 (335)
+++++||+++|+++.
T Consensus 269 -g~~~~vp~~~~~~~~ 283 (342)
T 3pvk_A 269 -NAKISVPASEFAASL 283 (342)
T ss_dssp -TCEEEEEGGGGEEC-
T ss_pred -CCEEEEcHHHheeec
Confidence 489999999999863
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.2e-46 Score=353.68 Aligned_cols=269 Identities=19% Similarity=0.234 Sum_probs=217.9
Q ss_pred eEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCC
Q 019819 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (335)
Q Consensus 9 ~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~ 84 (335)
..+||. ..|+++|+||||+|++.|+|||||+++||+|. +|..+.+..++.|+|++|+ +
T Consensus 52 ~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~y~~~~Ss-----------------T 113 (375)
T 1miq_A 52 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCSIKNLYDSSKSK-----------------S 113 (375)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGGGSCCBCGGGCT-----------------T
T ss_pred ceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCcccccCCCcCCCccCC-----------------c
Confidence 457888 68999999999999999999999999999999 8974333467899998883 2
Q ss_pred CCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceee----cCCCCCCCCCCCceEEeeCCCC----
Q 019819 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN----QHNPGPLSPPDTAGVLGLGRGR---- 156 (335)
Q Consensus 85 ~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~~GIlGLg~~~---- 156 (335)
+.. ..|.|.+.|++| .+.|.+++|+|+| |+..+++ .|||+.. +. .+ .....+||||||++.
T Consensus 114 ~~~--~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~~-~f--~~~~~dGilGLg~~~~s~~ 182 (375)
T 1miq_A 114 YEK--DGTKVDITYGSG-TVKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLEP-IY--SSVEFDGILGLGWKDLSIG 182 (375)
T ss_dssp CEE--EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGTT-HH--HHSCCCEEEECSSCCTTCS
T ss_pred eEE--CCcEEEEEeCCC-eEEEEEEEEEEEE----cCceECc-EEEEEEecccccc-cc--ccCCCceEEeCCCCccccc
Confidence 222 468999999999 5899999999999 4667888 9999998 43 22 125689999999975
Q ss_pred --CchHHHHhhcCcc-cceeeeeeccC--CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC
Q 019819 157 --ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK 229 (335)
Q Consensus 157 --~s~~~ql~~~g~i-~~~Fs~~l~~~--~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~ 229 (335)
.+++++|+++|+| +++||+||.+. ..|.|+|||++. ..+++.|+|+.. ..+|.|.++ |.++++.+ .
T Consensus 183 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~--~ 255 (375)
T 1miq_A 183 SIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM--E 255 (375)
T ss_dssp SCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE--E
T ss_pred CCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc--c
Confidence 4589999999999 89999999854 489999999753 368999999975 379999999 99999887 5
Q ss_pred CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEE
Q 019819 230 DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLV 309 (335)
Q Consensus 230 ~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 309 (335)
...+||||||++++||++++++|.+++.+.... . ......+|+. ..+|+|+|+|+| ++++
T Consensus 256 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----~-~g~~~~~C~~----------~~~P~i~f~f~g----~~~~ 315 (375)
T 1miq_A 256 KANVIVDSGTTTITAPSEFLNKFFANLNVIKVP-----F-LPFYVTTCDN----------KEMPTLEFKSAN----NTYT 315 (375)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHHHHTCEECT-----T-SSCEEEETTC----------TTCCCEEEECSS----CEEE
T ss_pred cceEEecCCCccEEcCHHHHHHHHHHhCCcccC-----C-CCeEEEECCC----------CCCCcEEEEECC----EEEE
Confidence 678999999999999999999999999664321 1 1122346764 248999999977 9999
Q ss_pred eCCCeEEEEEeC-CCEEEE-EEecCC
Q 019819 310 VPPEAYLVISVS-TSIIII-AYLTGK 333 (335)
Q Consensus 310 l~~~~y~~~~~~-~~~~cl-~~~~g~ 333 (335)
|++++|+++... ++..|+ +|+...
T Consensus 316 l~~~~yi~~~~~~g~~~C~~~~~~~~ 341 (375)
T 1miq_A 316 LEPEYYMNPILEVDDTLCMITMLPVD 341 (375)
T ss_dssp ECGGGSEEESSSSSCSEEEESEEECC
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECC
Confidence 999999998643 334565 887654
No 22
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.2e-46 Score=346.15 Aligned_cols=272 Identities=16% Similarity=0.279 Sum_probs=220.4
Q ss_pred cceeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC----CCCCCCCCCCCCCCCcccCCcccccCC
Q 019819 6 IEFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAAL 77 (335)
Q Consensus 6 ~~~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~----~C~~~~~~~f~p~~S~~~c~~~~C~~~ 77 (335)
...+.+||. ..|+++|+||||+|+++|++||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 5 ~~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss----------- 70 (341)
T 3k1w_A 5 NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS----------- 70 (341)
T ss_dssp CBCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT-----------
T ss_pred CCCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc-----------
Confidence 356688998 68999999999999999999999999999999 897 454 67899999883
Q ss_pred CCCCCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCC
Q 019819 78 HWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRI 157 (335)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~ 157 (335)
++.. ..|.|.+.|++| .+.|.+++|+|+| |+..+ ++.|||+....... +.....+||||||++..
T Consensus 71 ------T~~~--~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v-~~~fg~~~~~~~~~-~~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 71 ------SYKH--NGTELTLRYSTG-TVSGFLSQDIITV----GGITV-TQMFGEVTEMPALP-FMLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------TCEE--EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEE-EEEEEEEEECCHHH-HTTCSSSEEEECSCGGG
T ss_pred ------CeeE--CCCEEEEEECCc-EEEEEEEEEEEEE----CCcee-eEEEEEEEEccccc-cccCCcceEEECCchhh
Confidence 2222 478999999999 5999999999999 46667 99999999875421 11256899999999754
Q ss_pred ------chHHHHhhcCcc-cceeeeeeccCC------ceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEec
Q 019819 158 ------SIVSQLREYGLI-RNVIGHCIGQNG------RGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYS 222 (335)
Q Consensus 158 ------s~~~ql~~~g~i-~~~Fs~~l~~~~------~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~ 222 (335)
+++++|+++|+| +++||+||.+.. .|.|+||+++ +..+++.|+|+.. ..+|.|.+++|.++
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~ 211 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVG 211 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEET
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEEC
Confidence 589999999999 899999998543 8999999975 3468999999975 38899999999999
Q ss_pred CEEeec-CCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcC
Q 019819 223 GKSCGL-KDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTN 301 (335)
Q Consensus 223 ~~~~~~-~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g 301 (335)
++.+.. ....++|||||++++||++++++|.+++.+.... .....+|... ..+|+|+|+|+|
T Consensus 212 ~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~--------~g~~~~C~~~---------~~~p~i~f~f~g 274 (341)
T 3k1w_A 212 SSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRL--------FDYVVKCNEG---------PTLPDISFHLGG 274 (341)
T ss_dssp TEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS--------SCEEEEGGGG---------GGCCCEEEEETT
T ss_pred CEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecC--------CCeEEeCCCC---------CcCCcEEEEECC
Confidence 987543 4578999999999999999999999999654321 1123457642 358999999988
Q ss_pred CCCceEEEeCCCeEEEEEeC-CCEEEE-EEec
Q 019819 302 RRNSVRLVVPPEAYLVISVS-TSIIII-AYLT 331 (335)
Q Consensus 302 ~~~~~~~~l~~~~y~~~~~~-~~~~cl-~~~~ 331 (335)
++++|++++|+++... ++..|+ +|+.
T Consensus 275 ----~~~~l~~~~~~~~~~~~~~~~C~~~i~~ 302 (341)
T 3k1w_A 275 ----KEYTLTSADYVFQESYSSKKLCTLAIHA 302 (341)
T ss_dssp ----EEEEECHHHHBCCSCCCTTSEEEBSEEE
T ss_pred ----EEEEECHHHheeEccCCCCCeEEeEEEe
Confidence 9999999999987543 245566 5765
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.3e-45 Score=352.68 Aligned_cols=271 Identities=18% Similarity=0.227 Sum_probs=216.9
Q ss_pred eEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCC
Q 019819 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (335)
Q Consensus 9 ~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~ 84 (335)
..+||. ..|+++|+||||+|++.|++||||+++||+|. +|..+.+..++.|+|++|+ +
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~~~~~ydps~Ss-----------------T 189 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCLTKHLYDSSKSR-----------------T 189 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGGGSCCBCGGGCT-----------------T
T ss_pred CceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccCCCCcCCCccCC-----------------c
Confidence 457887 68999999999999999999999999999999 8974444468899998883 2
Q ss_pred CCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecC--CCCCCCCCCCceEEeeCCCC------
Q 019819 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQH--NPGPLSPPDTAGVLGLGRGR------ 156 (335)
Q Consensus 85 ~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~--~~~~~~~~~~~GIlGLg~~~------ 156 (335)
+.. ..|.|.+.|++| ++.|.+++|+|+| |+..++ +.|||+.... +.. +.....+||||||++.
T Consensus 190 ~~~--~~~~~~i~YgdG-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~~~g~~-f~~~~~dGIlGLg~~~~s~~~~ 260 (453)
T 2bju_A 190 YEK--DGTKVEMNYVSG-TVSGFFSKDLVTV----GNLSLP-YKFIEVIDTNGFEPT-YTASTFDGILGLGWKDLSIGSV 260 (453)
T ss_dssp CEE--EEEEEEEECSSS-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECGGGTTH-HHHSSCCEEEECSCGGGSTTCC
T ss_pred eeE--CCcEEEEEcCCC-CeEEEEEEEEEEE----eCcEEE-EEEEEEEEecccCcc-ccccCCceeEeccCCcccccCC
Confidence 222 468999999999 4899999999999 466788 9999999875 321 1114689999999864
Q ss_pred CchHHHHhhcCcc-cceeeeeeccC--CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCCC
Q 019819 157 ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (335)
Q Consensus 157 ~s~~~ql~~~g~i-~~~Fs~~l~~~--~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~ 231 (335)
.+++++|+++|+| +++||+||.+. .+|.|+|||++. ..+++.|+|+... .+|.|.++ |.++++.+ ...
T Consensus 261 ~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~----~~w~V~l~-I~Vgg~~~--~~~ 333 (453)
T 2bju_A 261 DPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD----LYWQITLD-AHVGNIML--EKA 333 (453)
T ss_dssp CCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE----TTEEEEEE-EEETTEEE--EEE
T ss_pred CcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC----ceEEEEEE-EEECcEEe--ccc
Confidence 4688999999999 89999999854 689999999753 3689999999863 78999999 99999432 567
Q ss_pred cEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeC
Q 019819 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (335)
Q Consensus 232 ~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~ 311 (335)
.+|+||||++++||++++++|.+++.+... ........+|+. ..+|+|+|+|+| ++++||
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~------~~g~~~~v~C~~----------~~~P~itf~fgg----~~~~l~ 393 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVIKV------PFLPFYVTLCNN----------SKLPTFEFTSEN----GKYTLE 393 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCEEC------TTSSCEEEETTC----------TTCCCEEEECSS----CEEEEC
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCccc------CCCceEEEecCC----------CCCCcEEEEECC----EEEEEC
Confidence 899999999999999999999988754311 101022346764 248999999977 999999
Q ss_pred CCeEEEEEeC-CCEEEE-EEecCC
Q 019819 312 PEAYLVISVS-TSIIII-AYLTGK 333 (335)
Q Consensus 312 ~~~y~~~~~~-~~~~cl-~~~~g~ 333 (335)
+++|+++... ++..|+ +|++..
T Consensus 394 ~~~yi~~~~~~g~~~C~~~~~~~~ 417 (453)
T 2bju_A 394 PEYYLQHIEDVGPGLCMLNIIGLD 417 (453)
T ss_dssp HHHHEEECTTTSTTEEEECEEECC
T ss_pred HHHhEeecccCCCceEEEEEEeCC
Confidence 9999998653 344565 787653
No 24
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=7e-46 Score=342.07 Aligned_cols=271 Identities=15% Similarity=0.182 Sum_probs=216.2
Q ss_pred cceeEEeee--ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCC
Q 019819 6 IEFFFFPIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 83 (335)
Q Consensus 6 ~~~~~~Pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~ 83 (335)
++....|+. ..|+++|+|| +|++.|+|||||+++||+|. +|..|.++.++.|+|++|+
T Consensus 4 g~v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss----------------- 63 (323)
T 1bxo_A 4 GVATNTPTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG----------------- 63 (323)
T ss_dssp EEEEEEECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC-----------------
T ss_pred CceeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC-----------------
Confidence 345566766 8999999999 89999999999999999999 8998877788999998872
Q ss_pred CCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC-------
Q 019819 84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------- 156 (335)
Q Consensus 84 ~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------- 156 (335)
... +.|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||+....+.+. .....+||||||++.
T Consensus 64 -~~~--~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~~~ 135 (323)
T 1bxo_A 64 -KEL--SGYTWSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQISAQFQ-QDTNNDGLLGLAFSSINTVQPQ 135 (323)
T ss_dssp -EEE--EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH-TCTTCSEEEECSCGGGCCCBSS
T ss_pred -ccc--CCCeEEEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEecCcccc-cCCCCceEEEeCcccccccccC
Confidence 111 46899999999977999999999999 566789999999998644321 113679999999863
Q ss_pred --CchHHHHhhcCcc-cceeeeeeccCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCCC
Q 019819 157 --ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL 231 (335)
Q Consensus 157 --~s~~~ql~~~g~i-~~~Fs~~l~~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~ 231 (335)
.+++++|.++ + +++||+||.++..|.|+||+++ +..+++.|+|+... ..+|.|.+++|.+++ +.....
T Consensus 136 ~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~~~~~ 208 (323)
T 1bxo_A 136 SQTTFFDTVKSS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QSGDGF 208 (323)
T ss_dssp CCCCHHHHHGGG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EEEEEE
T ss_pred CCCCHHHHHHHh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--ccCCCc
Confidence 3578999887 6 8999999987778999999986 34799999999754 478999999999999 333457
Q ss_pred cEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeC
Q 019819 232 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP 311 (335)
Q Consensus 232 ~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~ 311 (335)
.+||||||++++||++++++|++++.+.... .. ......+|+. .+|+|+|+|+| ++++||
T Consensus 209 ~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~----~~-~g~~~~~C~~-----------~~P~i~f~fgg----~~~~l~ 268 (323)
T 1bxo_A 209 SGIADTGTTLLLLDDSVVSQYYSQVSGAQQD----SN-AGGYVFDCST-----------NLPDFSVSISG----YTATVP 268 (323)
T ss_dssp EEEECTTCSSEEECHHHHHHHHTTSTTCEEE----TT-TTEEEECTTC-----------CCCCEEEEETT----EEEEEC
T ss_pred eEEEeCCCCceeCCHHHHHHHHHhCCCceEc----Cc-CCEEEEECCC-----------CCceEEEEECC----EEEEEC
Confidence 8999999999999999999999988432211 00 1112235763 47999999966 999999
Q ss_pred CCeEEEEEeCCCEEEEE-Eec
Q 019819 312 PEAYLVISVSTSIIIIA-YLT 331 (335)
Q Consensus 312 ~~~y~~~~~~~~~~cl~-~~~ 331 (335)
+++|++...+++..|++ |+.
T Consensus 269 ~~~~~~~~~~~~~~C~~~i~~ 289 (323)
T 1bxo_A 269 GSLINYGPSGDGSTCLGGIQS 289 (323)
T ss_dssp HHHHEEEECSSSSCEEESEEE
T ss_pred HHHeEEeccCCCCeEEEEEEC
Confidence 99999876444355666 664
No 25
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.6e-45 Score=339.57 Aligned_cols=270 Identities=16% Similarity=0.221 Sum_probs=215.6
Q ss_pred ceeEEeee--ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCC
Q 019819 7 EFFFFPIF--SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPR 84 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~ 84 (335)
+....|+. ..|+++|+|| +|++.|+|||||+++||+|. +|..|.++.++.|+|++|+
T Consensus 5 ~v~~~~~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss------------------ 63 (323)
T 1izd_A 5 SVTTNPTSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA------------------ 63 (323)
T ss_dssp EEEEEECGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC------------------
T ss_pred ceeeeEcCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC------------------
Confidence 44456666 7899999999 79999999999999999999 8998877788999998883
Q ss_pred CCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC--------
Q 019819 85 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR-------- 156 (335)
Q Consensus 85 ~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~-------- 156 (335)
+.. +.|.|.+.|++|+.+.|.+++|+|+| |+..++++.|||++...+.+. .....+||||||++.
T Consensus 64 ~~~--~~~~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~-~~~~~~GilGLg~~~~s~~~p~~ 136 (323)
T 1izd_A 64 QKI--DGATWSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEFT-QDTANDGLLGLAFSSINTVQPTP 136 (323)
T ss_dssp EEE--EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH-HCTTCCEEEECSCGGGCCCBSSC
T ss_pred Ccc--CCCeEEEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEecccccc-ccCCCceEEecCcccccccCCCC
Confidence 111 46799999999977999999999999 567789999999998644321 113579999999864
Q ss_pred -CchHHHHhhcCcc-cceeeeeeccCCceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCCCc
Q 019819 157 -ISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLT 232 (335)
Q Consensus 157 -~s~~~ql~~~g~i-~~~Fs~~l~~~~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~ 232 (335)
.+++++|.++ + +++||+||.++..|.|+||+++. ..+++.|+|+... ..+|.|.+++|.+++ .+......
T Consensus 137 ~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~~~~~~ 210 (323)
T 1izd_A 137 QKTFFDNVKSS--LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSSSDSIT 210 (323)
T ss_dssp CCCHHHHHGGG--SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEECCCEE
T ss_pred CCCHHHHHHHh--ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-cccCCCce
Confidence 3478899887 6 89999999876789999999753 3688999999754 478999999999999 66555678
Q ss_pred EEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeCC
Q 019819 233 LIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPP 312 (335)
Q Consensus 233 ~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~ 312 (335)
+|+||||++++||++++++|.+++.+.... .. ......+|+. .+|+|+|+|+| ++++||+
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~----~~-~g~~~~~C~~-----------~~P~i~f~fgg----~~~~i~~ 270 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVNGASYD----SS-QGGYVFPSSA-----------SLPDFSVTIGD----YTATVPG 270 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTTCEEE----TT-TTEEEEETTC-----------CCCCEEEEETT----EEEEECH
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCCCcEEc----Cc-CCEEEEECCC-----------CCceEEEEECC----EEEecCH
Confidence 999999999999999999999888432210 00 1112235763 47999999966 9999999
Q ss_pred CeEEEEEeCCCEEEEE-Eec
Q 019819 313 EAYLVISVSTSIIIIA-YLT 331 (335)
Q Consensus 313 ~~y~~~~~~~~~~cl~-~~~ 331 (335)
++|++.... +..|++ |+.
T Consensus 271 ~~~~~~~~~-~~~C~~~i~~ 289 (323)
T 1izd_A 271 EYISFADVG-NGQTFGGIQS 289 (323)
T ss_dssp HHHEEEECS-TTEEEESEEE
T ss_pred HHeEEecCC-CCeEEEEEEc
Confidence 999987543 456666 765
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.4e-45 Score=336.56 Aligned_cols=267 Identities=12% Similarity=0.140 Sum_probs=214.2
Q ss_pred EEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCcccccCCCCCCCC
Q 019819 10 FFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPP 83 (335)
Q Consensus 10 ~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~ 83 (335)
..||. ..|+++|+|| +|++.|+|||||+++||+|. +|. .|....++.|+|++|+ +.
T Consensus 8 ~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~ST--~~------------- 69 (330)
T 1yg9_A 8 YKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKPK--YI------------- 69 (330)
T ss_dssp CSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSCE--EE-------------
T ss_pred EeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCCc--eE-------------
Confidence 35666 6899999999 79999999999999999999 897 6844567899998872 11
Q ss_pred CCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCCc-----
Q 019819 84 RCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS----- 158 (335)
Q Consensus 84 ~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s----- 158 (335)
. ..+.|.+.|++| ++.|.+++|+|+| |+..++++.|||+......+ .....+||||||++..+
T Consensus 70 ---~--~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~~~~f--~~~~~~GilGLg~~~~s~~~~~ 137 (330)
T 1yg9_A 70 ---S--DGNVQVKFFDTG-SAVGRGIEDSLTI----SQLTTSQQDIVLADELSQEV--CILSADVVVGIAAPGCPNALKG 137 (330)
T ss_dssp ---E--EEEEEEEETTTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECTHH--HHTTCSEEEECSCTTSCCTTSC
T ss_pred ---E--CCCEEEEEECCc-eEEEEEEEEEEEE----CCEEEcCeEEEEEEEccccc--ccccCceEEEcCcchhccccCC
Confidence 1 356899999999 5699999999999 56778999999999872222 11468999999997655
Q ss_pred --hHHHHhhcCcccceeeeeeccC--C--ceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecCC
Q 019819 159 --IVSQLREYGLIRNVIGHCIGQN--G--RGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD 230 (335)
Q Consensus 159 --~~~ql~~~g~i~~~Fs~~l~~~--~--~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~ 230 (335)
++++|+++|+|+++||+||.+. . .|.|+||+++. ..+++.|+|+.. ..+|.|.+++|.++++.+....
T Consensus 138 ~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~ 213 (330)
T 1yg9_A 138 KTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVAPAG 213 (330)
T ss_dssp CCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTEEEECTT
T ss_pred CCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCEEEcCCC
Confidence 8999999998899999999753 2 89999999753 468999999974 4899999999999998876556
Q ss_pred CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCC-CC-CCccccCCcccccccccccccEEEEEcCCCCceEE
Q 019819 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDD-KT-LPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRL 308 (335)
Q Consensus 231 ~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~-~~-~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~ 308 (335)
..+||||||++++||++++++|++++.+.... . .. .. ..+|+.. +.+|+|+|+|+| +++
T Consensus 214 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----~-g~~~~~~~~C~~~---------~~~p~i~f~fgg----~~~ 274 (330)
T 1yg9_A 214 TQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK-----T-TTRRICKLDCSKI---------PSLPDVTFVING----RNF 274 (330)
T ss_dssp CEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE-----C-SSCEEEEECGGGG---------GGSCCEEEEETT----EEE
T ss_pred cEEEEecCCccccCCHHHHHHHHHHhCCcccC-----C-CceEEEEEECCCc---------cccCcEEEEECC----EEE
Confidence 88999999999999999999999998654321 0 10 11 2347542 358999999976 999
Q ss_pred EeCCCeEEEEEeCCCEEEEEEec
Q 019819 309 VVPPEAYLVISVSTSIIIIAYLT 331 (335)
Q Consensus 309 ~l~~~~y~~~~~~~~~~cl~~~~ 331 (335)
+|++++|+++. +..|-++|+.
T Consensus 275 ~l~~~~y~~~~--~~~C~~~i~~ 295 (330)
T 1yg9_A 275 NISSQYYIQQN--GNLCYSGFQP 295 (330)
T ss_dssp EECHHHHEEEE--TTEEEESEEE
T ss_pred EECHHHhcccC--CCcEEEEEEe
Confidence 99999999986 3344446764
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=3.5e-45 Score=350.04 Aligned_cols=269 Identities=17% Similarity=0.230 Sum_probs=216.0
Q ss_pred ceeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC--CCCCCCCCCCCCCCCcccCCcccccCCCCC
Q 019819 7 EFFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT--GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (335)
Q Consensus 7 ~~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~ 80 (335)
....+||. ..|+++|+||||||++.|++||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~Ss-------------- 187 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSK-------------- 187 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCT--------------
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCc--------------
Confidence 34567887 57999999999999999999999999999999 895 564 67899998883
Q ss_pred CCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceee----cCCCCCCCCCCCceEEeeCCCC
Q 019819 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN----QHNPGPLSPPDTAGVLGLGRGR 156 (335)
Q Consensus 81 ~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~----~~~~~~~~~~~~~GIlGLg~~~ 156 (335)
++.. ..|.|.+.|++|+ +.|.+++|+|+| |+..++ +.|||++. ..+ +. ....+||||||++.
T Consensus 188 ---T~~~--~~~~f~i~YgdGs-~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~~~-f~--~~~~dGILGLg~~~ 253 (451)
T 3qvc_A 188 ---TYEK--DDTPVKLTSKAGT-ISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFEPF-YS--ESDVDGVFGLGWKD 253 (451)
T ss_dssp ---TCEE--EEEEEEEECSSEE-EEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECTTH-HH--HSCCCEEEECSSBC
T ss_pred ---cccc--CCCEEEEEECCCE-EEEEEEEEEEEE----CCEEEE-EEEEEEEeccccCCC-cc--CCCCCEEEecCCCc
Confidence 2222 4679999999995 999999999999 566788 99999988 433 21 14679999999864
Q ss_pred ------CchHHHHhhcCcc-cceeeeeeccC--CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEE
Q 019819 157 ------ISIVSQLREYGLI-RNVIGHCIGQN--GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKS 225 (335)
Q Consensus 157 ------~s~~~ql~~~g~i-~~~Fs~~l~~~--~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~ 225 (335)
.+++++|.++|+| +++||+||.+. ..|.|+|||++. ..+++.|+|+.. ..+|.|.++ |.++++
T Consensus 254 ~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~- 327 (451)
T 3qvc_A 254 LSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV- 327 (451)
T ss_dssp SSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE-
T ss_pred ccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc-
Confidence 5689999999999 89999999853 489999999753 468999999985 388999999 999998
Q ss_pred eecCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCCCc
Q 019819 226 CGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNS 305 (335)
Q Consensus 226 ~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~ 305 (335)
......+++||||++++||++++++|.+++.+..... ......+|. . ..+|+|+|+|+|
T Consensus 328 -~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~~------~g~y~v~C~-~---------~~~P~itf~fgg---- 386 (451)
T 3qvc_A 328 -SSKKANVILDSATSVITVPTEFFNQFVESASVFKVPF------LSLYVTTCG-N---------TKLPTLEYRSPN---- 386 (451)
T ss_dssp -EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECTT------SSCEEEETT-C---------TTCCCEEEEETT----
T ss_pred -cCCCceEEEeCCCccccCCHHHHHHHHHHcCCeecCC------CCeEEeeCC-c---------CcCCcEEEEECC----
Confidence 3345789999999999999999999999886543210 111223554 1 358999999988
Q ss_pred eEEEeCCCeEEEEEeC--CCEEEEEEecCC
Q 019819 306 VRLVVPPEAYLVISVS--TSIIIIAYLTGK 333 (335)
Q Consensus 306 ~~~~l~~~~y~~~~~~--~~~~cl~~~~g~ 333 (335)
++++||+++|+++..+ ++.|.++|+...
T Consensus 387 ~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~ 416 (451)
T 3qvc_A 387 KVYTLEPKQYLEPLENIFSALCMLNIVPID 416 (451)
T ss_dssp EEEEECHHHHEEECTTTSTTEEEECEEECC
T ss_pred EEEEEcHHHheeecccCCCCeEEEEEEeCC
Confidence 9999999999998642 346666787653
No 28
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.1e-44 Score=346.27 Aligned_cols=219 Identities=25% Similarity=0.355 Sum_probs=183.3
Q ss_pred eeEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC---CCCCCCCCCCCCCCCcccCCcccccCCCCC
Q 019819 8 FFFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (335)
Q Consensus 8 ~~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~---~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~ 80 (335)
...+||. ..|+++|+||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|+
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~--~~~~y~~~~Ss-------------- 103 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACY--LHSRYKAGASS-------------- 103 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGG--GSCCBCGGGCT--------------
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCcccc--CCCCCCcccCC--------------
Confidence 3457777 68999999999999999999999999999999 896 575 56889998883
Q ss_pred CCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCCc--
Q 019819 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS-- 158 (335)
Q Consensus 81 ~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s-- 158 (335)
++.. ..|.|.+.|++| ++.|.+++|+|+| |+..++++.|||+....+.. +....++||||||++..+
T Consensus 104 ---T~~~--~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~-f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 104 ---TYKK--NGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKEPGIT-FLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp ---TCBC--CCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCBSH-HHHCSSSEEEECSCGGGCGG
T ss_pred ---Ceee--CCcEEEEEcCCC-CeEEEEEEEEEEE----CCeEECCEEEEEEEecCCcc-cccccccceecccccccccC
Confidence 2222 467999999999 5899999999999 56778999999998864321 111467999999997654
Q ss_pred ----hHHHHhhcCcc-cceeeeeeccC----CceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEee
Q 019819 159 ----IVSQLREYGLI-RNVIGHCIGQN----GRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG 227 (335)
Q Consensus 159 ----~~~ql~~~g~i-~~~Fs~~l~~~----~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~ 227 (335)
++.+|+++|+| +++||+||.+. .+|.|+||+++. ..+++.|+|+... .+|.|.+++|.++++.+.
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~----~~w~v~l~~i~v~g~~~~ 248 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK----GYWQFDMGDVLVGGKSTG 248 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE----TTEEEEECCEEETTEECS
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC----CeEEEEEeEEEECCEEEe
Confidence 67899999999 89999999753 489999999753 3588999999863 799999999999998875
Q ss_pred c--CCCcEEEecCCcceeeCHHHHHHHHHHHHH
Q 019819 228 L--KDLTLIFDSGASYAYFTSRVYQEIVSLIMR 258 (335)
Q Consensus 228 ~--~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~ 258 (335)
+ ....+|+||||++++||++++++|.++|.+
T Consensus 249 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 249 FCAGGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp TTTTCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred ecCCCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 4 357899999999999999999999999864
No 29
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=9.2e-44 Score=330.26 Aligned_cols=260 Identities=19% Similarity=0.235 Sum_probs=210.0
Q ss_pred eEEeee---ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCC
Q 019819 9 FFFPIF---SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRC 85 (335)
Q Consensus 9 ~~~Pl~---~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~ 85 (335)
..+||. ..|+++|+||||+|++.|+|||||+++||+|. +.|+|++|+ +
T Consensus 3 ~~~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss-----------------~- 53 (340)
T 1wkr_A 3 GSVPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTS-----------------S- 53 (340)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTC-----------------E-
T ss_pred ccEeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCc-----------------c-
Confidence 467888 78999999999999999999999999999764 468987772 0
Q ss_pred CCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC---------
Q 019819 86 KHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------- 156 (335)
Q Consensus 86 ~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------- 156 (335)
. ..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||+....+ + ...+||||||++.
T Consensus 54 -~--~~~~~~i~Yg~G-s~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~~~-~----~~~~GilGLg~~~~s~~~~~~~ 120 (340)
T 1wkr_A 54 -A--TSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRDSG-F----DGVDGILGVGPVDLTVGTLSPH 120 (340)
T ss_dssp -E--EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEES-C----TTCSEEEECSCGGGGTTSEESC
T ss_pred -c--cCceEEEEECCc-EEEEEEEEEEEEE----CCEEEcceEEEEEEccCC-C----cCCCcEEECCcccccccccccc
Confidence 1 467999999999 5999999999999 467789999999998754 2 3689999999864
Q ss_pred -----CchHHHHhhcCcc-cceeeeeecc-----CCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecC
Q 019819 157 -----ISIVSQLREYGLI-RNVIGHCIGQ-----NGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSG 223 (335)
Q Consensus 157 -----~s~~~ql~~~g~i-~~~Fs~~l~~-----~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~ 223 (335)
.+++++|+++|+| +++||+||.+ ...|.|+||+++ +..+++.|+|+..+.....+|.|. ++|.+++
T Consensus 121 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~ 199 (340)
T 1wkr_A 121 TSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGS 199 (340)
T ss_dssp TTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETT
T ss_pred ccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECC
Confidence 3578999999999 8999999974 247999999985 457899999998864334789999 9999998
Q ss_pred -EEeecCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCC
Q 019819 224 -KSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNR 302 (335)
Q Consensus 224 -~~~~~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~ 302 (335)
+.+.. +..+||||||++++||++++++|.+++.+..... ......+|... ..+|+|+|+|+|
T Consensus 200 ~~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~------~g~~~~~C~~~---------~~~p~i~f~f~g- 262 (340)
T 1wkr_A 200 STSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVADNN------TGLLRLTTAQY---------ANLQSLFFTIGG- 262 (340)
T ss_dssp TEEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTT------TSSEEECHHHH---------HTCCCEEEEETT-
T ss_pred CeEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCC------CCeEEeecccc---------ccCCcEEEEECC-
Confidence 77753 4689999999999999999999988886543310 11122356542 358999999987
Q ss_pred CCceEEEeCCCeEEEEEeC-------CCEEEEEEec
Q 019819 303 RNSVRLVVPPEAYLVISVS-------TSIIIIAYLT 331 (335)
Q Consensus 303 ~~~~~~~l~~~~y~~~~~~-------~~~~cl~~~~ 331 (335)
++++|+|++|+++... ...||++|+.
T Consensus 263 ---~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~ 295 (340)
T 1wkr_A 263 ---QTFELTANAQIWPRNLNTAIGGSASSVYLIVGD 295 (340)
T ss_dssp ---EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEE
T ss_pred ---EEEEEcHHHhccccccccccCCCCceEEEEEec
Confidence 9999999999986431 2467788865
No 30
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=331.71 Aligned_cols=276 Identities=19% Similarity=0.290 Sum_probs=210.2
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCCCCcee
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~~~~~~~~~~ 94 (335)
..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+ + +.. ..|.|
T Consensus 13 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~Ss---------------T--~~~--~~~~~ 68 (383)
T 2ewy_A 13 RGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSS---------------T--YRS--KGFDV 68 (383)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCT---------------T--CEE--EEEEE
T ss_pred CcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCc---------------c--cee--CCceE
Confidence 67999999999999999999999999999999 88766 4789998883 2 222 46799
Q ss_pred EEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC--------CchHHHHhhc
Q 019819 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQLREY 166 (335)
Q Consensus 95 ~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~ql~~~ 166 (335)
.+.|++| ++.|.+++|+|+|+. +.....++.|++.....+.+. .....+||||||++. .+++++|.+|
T Consensus 69 ~i~Yg~G-s~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q 144 (383)
T 2ewy_A 69 TVKYTQG-SWTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFL-PGIKWNGILGLAYATLAKPSSSLETFFDSLVTQ 144 (383)
T ss_dssp EEECSSC-EEEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECCc-EEEEEEEEEEEEECC--CccceeEEEEEEEEeecceee-ccCcCceEEecCchhcccccccccCHHHHHHHc
Confidence 9999999 579999999999952 111122467888766544331 224689999999864 3578899999
Q ss_pred Ccccceeeeeec---------cCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC-----C
Q 019819 167 GLIRNVIGHCIG---------QNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-----D 230 (335)
Q Consensus 167 g~i~~~Fs~~l~---------~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~-----~ 230 (335)
+.++++||+||. ....|.|+||+++ +..+++.|+|+... .+|.|.+++|.|+++.+.++ .
T Consensus 145 ~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~~~ 220 (383)
T 2ewy_A 145 ANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE----WYYQIEILKLEIGGQSLNLDCREYNA 220 (383)
T ss_dssp HTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB----TTBBCCEEEEEETTEECCCCTTTTTS
T ss_pred cCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC----ceEEEEEEEEEECCEEccccccccCC
Confidence 888889999984 2357999999975 45789999999864 78999999999999987643 3
Q ss_pred CcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCC---CCCCCccccCCcccccccccccccEEEEEcCCC--Cc
Q 019819 231 LTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPD---DKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--NS 305 (335)
Q Consensus 231 ~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~~ 305 (335)
..+||||||++++||++++++|++++.+.... .+... ......|+.... .....+|+|+|+|+|+. ..
T Consensus 221 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~~~~ 293 (383)
T 2ewy_A 221 DKAIVDSGTTLLRLPQKVFDAVVEAVARASLI---PEFSDGFWTGSQLACWTNSE----TPWSYFPKISIYLRDENSSRS 293 (383)
T ss_dssp SCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS---SCCCHHHHHTSEEEEECSSS----CGGGGSCCEEEEEECSSTTEE
T ss_pred ccEEEEcCCccccCCHHHHHHHHHHHhhhccc---ccCccccccccccccccCCc----ccHhhCCcEEEEECCCCCCce
Confidence 68999999999999999999999999887642 11110 112357987421 11235899999998831 12
Q ss_pred eEEEeCCCeEEEEEeC--CCEEEEEE
Q 019819 306 VRLVVPPEAYLVISVS--TSIIIIAY 329 (335)
Q Consensus 306 ~~~~l~~~~y~~~~~~--~~~~cl~~ 329 (335)
++++|++++|+++..+ ++..|++|
T Consensus 294 ~~~~l~~~~yi~~~~~~~~~~~C~~~ 319 (383)
T 2ewy_A 294 FRITILPQLYIQPMMGAGLNYECYRF 319 (383)
T ss_dssp EEEEECHHHHEEEECCCTTCSEEEEE
T ss_pred EEEEEChHHheeecccCCCCceeEEE
Confidence 4899999999998642 24567753
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=8e-43 Score=330.24 Aligned_cols=280 Identities=18% Similarity=0.188 Sum_probs=211.8
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCCCCcee
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~~~~~~~~~~ 94 (335)
..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+ ++.. ..|.|
T Consensus 21 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss-----------------T~~~--~~~~~ 76 (395)
T 2qp8_A 21 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS-----------------TYRD--LRKGV 76 (395)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT-----------------TCEE--EEEEE
T ss_pred ceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC-----------------Ccee--CCceE
Confidence 67999999999999999999999999999998 88665 5789998883 2222 46899
Q ss_pred EEEeCCCCeEEEEEEEEEEEeeecCCccccc-ceEEeceeecCCCCCCCCCCCceEEeeCCCC--------CchHHHHhh
Q 019819 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQLRE 165 (335)
Q Consensus 95 ~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~-~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~ql~~ 165 (335)
.+.|++| .+.|.+++|+|+|+. +..+. .+.|++.......+. .....+||||||++. .+++++|++
T Consensus 77 ~i~Yg~G-s~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~-~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~ 151 (395)
T 2qp8_A 77 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 151 (395)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEECCc-EEEEEEEeEEEEECC---CCCceEEEEEEEEEccCcccc-cccCccceEEcCchhhccCCCCCCCHHHHHHH
Confidence 9999999 569999999999951 22222 467887766544331 124689999999864 467889999
Q ss_pred cCcccceeeeeecc------------CCceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC--
Q 019819 166 YGLIRNVIGHCIGQ------------NGRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-- 229 (335)
Q Consensus 166 ~g~i~~~Fs~~l~~------------~~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~-- 229 (335)
|++|+++||+||.+ ...|.|+||+++. ..+++.|+|+... .+|.|.+++|.|+++.+.++
T Consensus 152 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~ 227 (395)
T 2qp8_A 152 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCK 227 (395)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCGG
T ss_pred ccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC----ceEEEEEEEEEECCEEcccCcc
Confidence 99988899999963 3679999999753 4688999999763 78999999999999987542
Q ss_pred ---CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC--C
Q 019819 230 ---DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--N 304 (335)
Q Consensus 230 ---~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~ 304 (335)
...+||||||++++||+++|++|++++.+..................|+.... .....+|+|+|+|+|.. .
T Consensus 228 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~~~ 303 (395)
T 2qp8_A 228 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMGEVTNQ 303 (395)
T ss_dssp GGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC----CCGGGSCCEEEEEECSSTTE
T ss_pred ccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccccccccccccccc----chHhhCCcEEEEEccCCCCc
Confidence 36899999999999999999999999998764211100000112357987421 11235899999999831 1
Q ss_pred ceEEEeCCCeEEEEEeC---CCEEEE--EEec
Q 019819 305 SVRLVVPPEAYLVISVS---TSIIII--AYLT 331 (335)
Q Consensus 305 ~~~~~l~~~~y~~~~~~---~~~~cl--~~~~ 331 (335)
.++++|+|++|+++..+ +...|+ ++++
T Consensus 304 ~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~ 335 (395)
T 2qp8_A 304 SFRITILPQQYLRPVEDVATSQDDCYKFAISQ 335 (395)
T ss_dssp EEEEEECHHHHEEEECCTTCCSCEEEEECEEE
T ss_pred eEEEEECHHHhEeecccCCCCCceEEEEEecC
Confidence 13799999999998653 234675 4553
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.2e-42 Score=329.69 Aligned_cols=278 Identities=17% Similarity=0.195 Sum_probs=210.8
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCCCCcee
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~~~~~~~~~~ 94 (335)
..|+++|+||||+|+++|+|||||+++||+|. +| |. .++.|+|++|+ ++ .. ..|.|
T Consensus 28 ~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~Ss---------------T~--~~--~~~~~ 83 (402)
T 3vf3_A 28 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS---------------TY--RD--LRKGV 83 (402)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT---------------TC--EE--EEEEE
T ss_pred CEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCc---------------cc--cc--CCCEE
Confidence 58999999999999999999999999999998 78 43 56899999883 22 22 46799
Q ss_pred EEEeCCCCeEEEEEEEEEEEeeecCCccccc-ceEEeceeecCCCCCCCCCCCceEEeeCCCC--------CchHHHHhh
Q 019819 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFNV-PLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQLRE 165 (335)
Q Consensus 95 ~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~-~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~ql~~ 165 (335)
.+.|++| .+.|.+++|+|+|+. ...+. .+.|+++......+. .....+||||||++. .+++++|++
T Consensus 84 ~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 158 (402)
T 3vf3_A 84 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 158 (402)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEECcE-EEEEEEEEEEEEECC---ccccceeeeEEEEEccccccc-cCCCccceEEcCchhhcccCCcCCcHHHHHHH
Confidence 9999999 579999999999952 22233 345788776654431 225689999999853 578999999
Q ss_pred cCcccceeeeeec------------cCCceeEEeCCCC--CCCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC--
Q 019819 166 YGLIRNVIGHCIG------------QNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK-- 229 (335)
Q Consensus 166 ~g~i~~~Fs~~l~------------~~~~g~l~fG~~~--~~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~-- 229 (335)
+++|.++||+||. ....|.|+||+++ +..+++.|+|+... .+|.|.+++|.++++.+..+
T Consensus 159 q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~~~ 234 (402)
T 3vf3_A 159 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCK 234 (402)
T ss_dssp HSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB----TTBEECEEEEEETTEECCCCGG
T ss_pred ccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC----cEEEEEEeEEEECCEEeccccc
Confidence 9999889999995 2347999999975 34689999999763 78999999999999988653
Q ss_pred ---CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC--C
Q 019819 230 ---DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--N 304 (335)
Q Consensus 230 ---~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~ 304 (335)
...+||||||++++||++++++|++++.+.....+............|+.... .....+|+|+|+|+|.. .
T Consensus 235 ~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~----~~~~~~P~i~f~f~g~~~~~ 310 (402)
T 3vf3_A 235 EYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT----TPWNIFPVISLYLMGEVTNQ 310 (402)
T ss_dssp GGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTC----CCGGGSCCEEEEEECSSTTE
T ss_pred ccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccccccccccccccc----chHhhCCceEEEEecCCCCc
Confidence 46899999999999999999999999999864211111100122468987521 11235899999999831 1
Q ss_pred ceEEEeCCCeEEEEEeCC---CEEEEEE
Q 019819 305 SVRLVVPPEAYLVISVST---SIIIIAY 329 (335)
Q Consensus 305 ~~~~~l~~~~y~~~~~~~---~~~cl~~ 329 (335)
.++++|+|++|+++..+. ...|++|
T Consensus 311 ~~~~~l~~~~yi~~~~~~~~~~~~C~~~ 338 (402)
T 3vf3_A 311 SFRITILPQQYLRPVEDVATSQDDCYKF 338 (402)
T ss_dssp EEEEEECHHHHEEECCCGGGTTEEEEEE
T ss_pred eEEEEECHHHheehhccCCCCCceEEEE
Confidence 236999999999975432 1478764
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.8e-42 Score=333.39 Aligned_cols=279 Identities=18% Similarity=0.210 Sum_probs=214.0
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCCCCCCCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCCCCcee
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDY 94 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~~~~~~~~~~~~~ 94 (335)
..|+++|+||||+|+++|+|||||+++||+|. +| |. .++.|+|++|+ ++. . ..|.|
T Consensus 74 ~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~Ss---------------T~~--~--~~~~~ 129 (455)
T 3lpj_A 74 QGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS---------------TYR--D--LRKGV 129 (455)
T ss_dssp TEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT---------------TCE--E--EEEEE
T ss_pred CEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCC---------------Ccc--c--CCccE
Confidence 47999999999999999999999999999998 78 43 57899999883 222 2 46799
Q ss_pred EEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCC--------CchHHHHhhc
Q 019819 95 EIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------ISIVSQLREY 166 (335)
Q Consensus 95 ~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~ql~~~ 166 (335)
.+.|++| .+.|.+++|+|+|+. +.....++.|+|+......+. .....+||||||++. .+++++|+++
T Consensus 130 ~i~Yg~G-s~~G~~~~Dtv~ig~--~~~~~~~~~~~~~~~~~~~~~-~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 130 YVPYTQG-KWEGELGTDLVSIPH--GPNVTVRANIAAITESDKFFI-NGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT--SCSCEEEEEEEEEEEEESCSC-TTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEeCCe-EEEEEEEEEEEEECC--CcceeeEEEEEEEEccCcccc-cCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 9999999 579999999999952 111123467888877654431 225689999999853 5789999999
Q ss_pred Ccccceeeeeecc------------CCceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeecC---
Q 019819 167 GLIRNVIGHCIGQ------------NGRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLK--- 229 (335)
Q Consensus 167 g~i~~~Fs~~l~~------------~~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~--- 229 (335)
++|.++||+||.+ ...|.|+||+++. ..+++.|+|+... .+|.|.+++|.++++.+..+
T Consensus 206 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~w~v~l~~i~v~g~~~~~~~~~ 281 (455)
T 3lpj_A 206 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCKE 281 (455)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCGGG
T ss_pred cCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC----ceeEEEEeEEEECCEEccccccc
Confidence 9998899999952 3589999999753 4689999999863 78999999999999988653
Q ss_pred --CCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccCCcccccccccccccEEEEEcCCC--Cc
Q 019819 230 --DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRR--NS 305 (335)
Q Consensus 230 --~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~--~~ 305 (335)
...+||||||++++||++++++|+++|.+.....++...........|+..... ....+|+|+|+|+|.. ..
T Consensus 282 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~----~~~~~P~i~f~f~g~~~~~~ 357 (455)
T 3lpj_A 282 YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTT----PWNIFPVISLYLMGEVTNQS 357 (455)
T ss_dssp GGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCC----CGGGSCCEEEEEECSSTTEE
T ss_pred cCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCC----chhcCCcEEEEEcCCCcCce
Confidence 468999999999999999999999999998642111110001234689875211 1235899999999831 01
Q ss_pred eEEEeCCCeEEEEEeCC---CEEEEEE
Q 019819 306 VRLVVPPEAYLVISVST---SIIIIAY 329 (335)
Q Consensus 306 ~~~~l~~~~y~~~~~~~---~~~cl~~ 329 (335)
++++|++++|+++..+. ...|++|
T Consensus 358 ~~~~l~~~~yi~~~~~~~~~~~~C~~f 384 (455)
T 3lpj_A 358 FRITILPQQYLRPVEDVATSQDDCYKF 384 (455)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEE
T ss_pred EEEEECHHHheEeccCCCCCCceEEEE
Confidence 26999999999986543 2478864
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=4.1e-42 Score=303.58 Aligned_cols=217 Identities=22% Similarity=0.339 Sum_probs=182.2
Q ss_pred EEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC---CCCCCCCCCCCCCCCcccCCcccccCCCCCCC
Q 019819 10 FFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT---GCTKPPEKQYKPHKNIVPCSNPRCAALHWPNP 82 (335)
Q Consensus 10 ~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~---~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~~~ 82 (335)
.+||. ..|+++|+||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~--~~~~y~~~~Ss---------------- 64 (239)
T 1b5f_A 4 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACR--AHSMYESSDSS---------------- 64 (239)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHH--TSCCBCGGGCT----------------
T ss_pred eeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccC--CCCCCCCccCC----------------
Confidence 46777 78999999999999999999999999999999 896 565 46889998883
Q ss_pred CCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEeeecCCcccccceEEeceeecCCCCCCCCCCCceEEeeCCCCCc--hH
Q 019819 83 PRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRIS--IV 160 (335)
Q Consensus 83 ~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s--~~ 160 (335)
++.. ..|.|.+.|++| .+.|.+++|+|+| |+..++++.|||+....+.. +.....+||||||++..+ ++
T Consensus 65 -T~~~--~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~-f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 65 -TYKE--NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDEADNV-FLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp -TCEE--EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHH-HTTCSCCEEEECSCCSSSCCHH
T ss_pred -Ceee--CCcEEEEEECCC-cEEEEEEEEEEEE----CCcEEccEEEEEEEeccCcc-ccccCcceEEecCccccccHHH
Confidence 2222 467899999999 5899999999999 46678999999998764311 112568999999998765 67
Q ss_pred HHHhhcCcc-cceeeeeecc----CCceeEEeCCCCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEeec--CCC
Q 019819 161 SQLREYGLI-RNVIGHCIGQ----NGRGVLFLGDGKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL--KDL 231 (335)
Q Consensus 161 ~ql~~~g~i-~~~Fs~~l~~----~~~g~l~fG~~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~--~~~ 231 (335)
.+|+++++| +++||+||.+ ...|.|+||+++. ..+++.|+|+... .+|.|.+++|.|+++.+.+ ...
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~ 211 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ----YYWQFGIGDVLIGDKSTGFCAPGC 211 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE----TTEEEEECCEEETTEECCTTTTCE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC----CeEEEEeeEEEECCEEecccCCCC
Confidence 889999999 8999999974 3579999999753 3578999999864 7899999999999998764 346
Q ss_pred cEEEecCCcceeeCHHHHHHHHHHHHH
Q 019819 232 TLIFDSGASYAYFTSRVYQEIVSLIMR 258 (335)
Q Consensus 232 ~~iiDtGt~~~~lp~~~~~~l~~~i~~ 258 (335)
.+||||||++++||++++++|.++|.+
T Consensus 212 ~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 212 QAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred EEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 899999999999999999999998854
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.95 E-value=5.6e-28 Score=213.33 Aligned_cols=186 Identities=14% Similarity=0.194 Sum_probs=146.5
Q ss_pred cccccceEEeceeecCCCCCCCCCCCceEEeeCCCC------CchHHHHhhcCcc-cceeeeeeccC----CceeEEeCC
Q 019819 121 SVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR------ISIVSQLREYGLI-RNVIGHCIGQN----GRGVLFLGD 189 (335)
Q Consensus 121 ~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~------~s~~~ql~~~g~i-~~~Fs~~l~~~----~~g~l~fG~ 189 (335)
+.+++++.|||++...+.. +.....+||||||++. .+++++|+++|+| +++||+||.+. ..|.|+||+
T Consensus 2 g~~v~~~~Fg~~~~~~~~~-f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGIT-FIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CEEEEEEEEEEEEECCSST-TTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CeEECCeEEEEEEEccCCc-cccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 4568899999999875532 2225789999999974 4578999999999 89999999853 289999999
Q ss_pred CCC--CCCCceeeeceeCCCCCCceEEEeeEEEecCEEee-cCCCcEEEecCCcceeeCHHHHHHHHHHHHHHhcCCCCc
Q 019819 190 GKV--PSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCG-LKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLK 266 (335)
Q Consensus 190 ~~~--~~~~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~iiDtGt~~~~lp~~~~~~l~~~i~~~~~~~~~~ 266 (335)
++. ..+++.|+|+.. ..+|.|.+++|.++++.+. .....+|+||||++++||++++++|.+++.+....
T Consensus 81 ~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---- 152 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI---- 152 (241)
T ss_dssp CCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE----
T ss_pred cCHHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc----
Confidence 753 368999999975 3789999999999997643 34578999999999999999999999998654321
Q ss_pred cCCCCCCCCccccCCcccccccccccccEEEEEcCCCCceEEEeCCCeEEEEEeC-CCEEEE-EEec
Q 019819 267 LAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISVS-TSIIII-AYLT 331 (335)
Q Consensus 267 ~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~~~l~~~~y~~~~~~-~~~~cl-~~~~ 331 (335)
......+|+.. ..+|+|+|+|+| ++++|++++|+++..+ ++..|+ +|+.
T Consensus 153 ---~g~~~~~C~~~---------~~~p~i~f~f~g----~~~~l~~~~y~~~~~~~~~~~C~~~~~~ 203 (241)
T 1lya_B 153 ---QGEYMIPCEKV---------STLPAITLKLGG----KGYKLSPEDYTLKVSQAGKTLCLSGFMG 203 (241)
T ss_dssp ---TTEEEEEGGGG---------GGSCCEEEEETT----EEEEECTTTSEEEETTTTSSEEEESEEE
T ss_pred ---CCcEEEECCCC---------ccCCeEEEEECC----EEEEECHHHhEEEccCCCCCeeEEEEEe
Confidence 11123468753 358999999976 9999999999998653 234666 5875
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.84 E-value=4e-21 Score=144.58 Aligned_cols=85 Identities=26% Similarity=0.499 Sum_probs=73.2
Q ss_pred eEEeee----ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCCCCCC----CCCCCCCCCCCCCCCcccCCcccccCCCCC
Q 019819 9 FFFPIF----SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCT----GCTKPPEKQYKPHKNIVPCSNPRCAALHWP 80 (335)
Q Consensus 9 ~~~Pl~----~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~~c~----~C~~~~~~~f~p~~S~~~c~~~~C~~~~~~ 80 (335)
+.+||. ..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~--~~~~y~p~~Ss-------------- 65 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACW--IHHKYNSDKSS-------------- 65 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHH--TSCCBCGGGCT--------------
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccC--CCCCCCchhCC--------------
Confidence 357886 78999999999999999999999999999999 897 575 47899998883
Q ss_pred CCCCCCCCCCCceeEEEeCCCCeEEEEEEEEEEEee
Q 019819 81 NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLR 116 (335)
Q Consensus 81 ~~~~~~~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~ 116 (335)
++.. ..|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 66 ---T~~~--~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 66 ---TYVK--NGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp ---TCEE--EEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred ---Ccee--CCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 2222 4689999999994 9999999999995
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=96.57 E-value=0.0016 Score=46.84 Aligned_cols=37 Identities=11% Similarity=0.262 Sum_probs=29.5
Q ss_pred ccccEEEEEcCCCCceEEEeCCCeEEEEEeCC-CEEEE-EEec
Q 019819 291 YFKPLALSFTNRRNSVRLVVPPEAYLVISVST-SIIII-AYLT 331 (335)
Q Consensus 291 ~~P~i~f~f~g~~~~~~~~l~~~~y~~~~~~~-~~~cl-~~~~ 331 (335)
.+|+|+|+|+| ++++|+|++|++....+ +..|+ +|+.
T Consensus 12 ~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~ 50 (87)
T 1b5f_B 12 SMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTA 50 (87)
T ss_dssp GCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEE
T ss_pred cCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEE
Confidence 58999999987 99999999999986542 34566 5875
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=84.76 E-value=0.88 Score=35.57 Aligned_cols=29 Identities=17% Similarity=0.230 Sum_probs=26.2
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeC
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQC 45 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 45 (335)
+.+++++.|+. +++++++|||++.+-+..
T Consensus 25 ~~~~v~v~InG--~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 25 PMLYINIEINN--YPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred ceEEEEEEECC--EEEEEEEECCCCccccCH
Confidence 67999999998 899999999999988864
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=80.24 E-value=1.9 Score=31.65 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=23.0
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEe
Q 019819 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (335)
Q Consensus 18 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~ 44 (335)
++.|.||. |.+.+++|||+.++-+.
T Consensus 10 ~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEc
Confidence 57899998 99999999999999887
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=79.96 E-value=2.1 Score=31.18 Aligned_cols=26 Identities=31% Similarity=0.423 Sum_probs=23.2
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEeC
Q 019819 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQC 45 (335)
Q Consensus 18 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 45 (335)
++++.||. |.+.+++|||..++-+..
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEec
Confidence 57799998 999999999999998864
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=79.87 E-value=1.8 Score=34.05 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=27.2
Q ss_pred ceEEEEEEeCCCCcEEEEEEeCCCCceeEeCC
Q 019819 15 SYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 15 ~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 46 (335)
..+++++.|.. +++++++|||++.+.+...
T Consensus 23 ~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVNG--HPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEECC--EEEEEEEeCCCCcEeeCHH
Confidence 78999999998 9999999999999999754
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=74.90 E-value=3.3 Score=30.08 Aligned_cols=27 Identities=22% Similarity=0.186 Sum_probs=23.5
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEeCC
Q 019819 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 18 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 46 (335)
++++.||. |.+.+++|||..++-+...
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCc
Confidence 57799998 9999999999999988533
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=72.12 E-value=4.7 Score=31.22 Aligned_cols=30 Identities=13% Similarity=0.271 Sum_probs=23.7
Q ss_pred EEEecCEEeecCCCcEEEecCCcceeeCHHHHHHH
Q 019819 218 ELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEI 252 (335)
Q Consensus 218 ~i~v~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l 252 (335)
.+.++|+.+ .+++|||++.+.++.+..+.+
T Consensus 30 ~v~InG~~~-----~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 30 NIEINNYPV-----KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEEETTEEE-----EEEECTTCSSCEEEHHHHHHH
T ss_pred EEEECCEEE-----EEEEECCCCccccCHHHHHHc
Confidence 367788754 499999999999998876643
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=69.30 E-value=4.3 Score=31.79 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=23.5
Q ss_pred EEecCEEeecCCCcEEEecCCcceeeCHHHHHHH
Q 019819 219 LLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEI 252 (335)
Q Consensus 219 i~v~~~~~~~~~~~~iiDtGt~~~~lp~~~~~~l 252 (335)
+.++++.+ .+++|||++.+.++.+..+.+
T Consensus 29 ~~Ing~~v-----~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-----KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-----EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-----EEEEeCCCCcEeeCHHHHHHc
Confidence 44677754 489999999999999887765
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=67.02 E-value=5.8 Score=29.69 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=21.1
Q ss_pred EEeCCCCcEEEEEEeCCCCceeEeC
Q 019819 21 LTVGKPPKLFDFDFDTGSDLTWVQC 45 (335)
Q Consensus 21 i~iGtP~q~~~v~~DTGS~~~Wv~~ 45 (335)
|.||. |.+.+++|||..++-+..
T Consensus 18 ikI~G--q~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVNG--YPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEETT--EEEEEEECTTCSSCEEEG
T ss_pred EEECC--EEEEEEecCCCCcEEEcc
Confidence 99998 999999999999998864
No 46
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=66.16 E-value=6.4 Score=29.28 Aligned_cols=29 Identities=28% Similarity=0.438 Sum_probs=24.3
Q ss_pred EEEEEeC---CCCcEEEEEEeCCCCceeEeCC
Q 019819 18 AVNLTVG---KPPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 18 ~~~i~iG---tP~q~~~v~~DTGS~~~Wv~~~ 46 (335)
.++|.|| +|+|....++|||..++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4667777 6789999999999999999754
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=61.89 E-value=8.7 Score=28.59 Aligned_cols=27 Identities=26% Similarity=0.452 Sum_probs=23.6
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEeCC
Q 019819 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 18 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 46 (335)
.+.+.||. |.+.+++|||..++-+...
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGG
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecc
Confidence 46789998 9999999999999999754
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=56.56 E-value=11 Score=28.75 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=23.7
Q ss_pred EEEEEEeCCCCcEEEEEEeCCCCceeEeCC
Q 019819 17 FAVNLTVGKPPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 17 y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 46 (335)
=++.+.|+. |.+.+++|||.+++-+...
T Consensus 23 P~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CEEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 357789998 9999999999999988643
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=48.27 E-value=17 Score=29.99 Aligned_cols=26 Identities=31% Similarity=0.399 Sum_probs=23.1
Q ss_pred EEEEEEeCCCCcEEEEEEeCCCCceeEe
Q 019819 17 FAVNLTVGKPPKLFDFDFDTGSDLTWVQ 44 (335)
Q Consensus 17 y~~~i~iGtP~q~~~v~~DTGS~~~Wv~ 44 (335)
-.+++.||. |.+.+++|||..++-+.
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEe
Confidence 367899998 99999999999999885
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=47.80 E-value=20 Score=27.11 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=18.7
Q ss_pred eCCCCcEEEEEEeCCCCceeEeCC
Q 019819 23 VGKPPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 23 iGtP~q~~~v~~DTGS~~~Wv~~~ 46 (335)
||. |.+.+++|||..++-+...
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEE 48 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETT
T ss_pred CCC--EEEEEEecCCCCcEEEecc
Confidence 666 8889999999999999744
No 51
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=45.39 E-value=26 Score=29.23 Aligned_cols=40 Identities=20% Similarity=0.313 Sum_probs=28.2
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
....+|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 89 ~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 89 SLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 34556665 556554 668762 34578999999999999854
No 52
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=42.67 E-value=31 Score=30.37 Aligned_cols=40 Identities=20% Similarity=0.308 Sum_probs=29.7
Q ss_pred ceeEEeee---ceEEEE---EEeCC---CCcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF---SYFAVN---LTVGK---PPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~---~~y~~~---i~iGt---P~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||. +.....++||||++++++|..
T Consensus 182 ~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 182 PVAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp CEEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 45567775 567666 56776 246789999999999999854
No 53
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=38.78 E-value=41 Score=31.55 Aligned_cols=38 Identities=11% Similarity=0.279 Sum_probs=29.8
Q ss_pred cccccEEEEEcCCCCceEEEeCCCeEEEEEeCC-CEEEEE-Eec
Q 019819 290 EYFKPLALSFTNRRNSVRLVVPPEAYLVISVST-SIIIIA-YLT 331 (335)
Q Consensus 290 ~~~P~i~f~f~g~~~~~~~~l~~~~y~~~~~~~-~~~cl~-~~~ 331 (335)
..+|+|+|+|+| ++|+|+|++|++....+ ...|++ |+.
T Consensus 401 ~~lP~i~f~~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~ 440 (478)
T 1qdm_A 401 GSMPDIEFTIGG----KKFALKPEEYILKVGEGAAAQCISGFTA 440 (478)
T ss_dssp TTCCCEEEEETT----EEEEECHHHHEEECSCGGGCCEEESEEE
T ss_pred cccccEEEEECC----EEEEEChHHhEEEccCCCCCeEEEEEEe
Confidence 358999999987 99999999999986543 345665 764
No 54
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.00 E-value=32 Score=30.23 Aligned_cols=40 Identities=20% Similarity=0.266 Sum_probs=28.6
Q ss_pred ceeEEeee---ceEEEE---EEeCC-CCcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF---SYFAVN---LTVGK-PPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~---~~y~~~---i~iGt-P~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||. +.....+++|||++++++|..
T Consensus 178 ~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 178 SLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp CCEEEECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred ceEEEECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 45567775 456565 56765 335678999999999999854
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=36.63 E-value=36 Score=29.89 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=28.3
Q ss_pred ceeEEeee---ceEEEE---EEeCC--CCcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF---SYFAVN---LTVGK--PPKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~---~~y~~~---i~iGt--P~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||. +.+...+++|||++++++|..
T Consensus 178 ~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 178 SITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp EEEEEECBCTTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred ceEEEECCCCCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 44566774 456665 46765 235578999999999999854
No 56
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=36.63 E-value=24 Score=31.20 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=28.1
Q ss_pred ceeEEeee--ceEEEE---EEeCCC---CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP---~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+...+|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 183 ~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 183 EFTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp EEEEEEBSCTTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHH
T ss_pred ceEEEECCCCCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHH
Confidence 44556765 556555 778762 23467999999999999854
No 57
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=35.60 E-value=35 Score=30.04 Aligned_cols=40 Identities=18% Similarity=0.298 Sum_probs=29.0
Q ss_pred ceeEEeee---ceEEEE---EEeCCC---CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF---SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~---~~y~~~---i~iGtP---~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 181 ~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 181 SITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp CCEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred ceEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 45567775 456555 678763 34678999999999999854
No 58
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=35.01 E-value=42 Score=29.46 Aligned_cols=40 Identities=18% Similarity=0.291 Sum_probs=29.1
Q ss_pred ceeEEeee---ceEEEE---EEeCCC---CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF---SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~---~~y~~~---i~iGtP---~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 177 ~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 177 SITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp CCEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 45567775 456665 567762 35678999999999999853
No 59
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=34.82 E-value=45 Score=30.21 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=29.3
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+...+|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 232 ~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 232 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp EEEEEEBSSTTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEEcCCCceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 45567776 566664 678763 25678999999999999854
No 60
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=33.73 E-value=37 Score=29.82 Aligned_cols=40 Identities=28% Similarity=0.419 Sum_probs=28.4
Q ss_pred ceeEEeee---ceEEEE---EEeCCC--CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF---SYFAVN---LTVGKP--PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~---~~y~~~---i~iGtP--~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.+ .....++||||++++++|..
T Consensus 182 ~l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 182 SLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CCEEEECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred ceEEEEccCCCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 45567775 456554 567762 34578999999999999854
No 61
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=32.39 E-value=53 Score=28.68 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=27.8
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.++ |.||.- +....+++|||++++++|..
T Consensus 179 ~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 227 (323)
T 3cms_A 179 SLHWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSS 227 (323)
T ss_dssp EEEEEECSSBTTBEEEEEEEEETTEEEESTTCEEEEECTTCCSEEECHH
T ss_pred ceEEEECccCCeEEEEEeeEEECCEEeecCCCcEEEEecCCccEeCCHH
Confidence 34556666 556554 677762 23468999999999999854
No 62
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=32.17 E-value=39 Score=30.01 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=28.4
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 191 ~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~ 239 (351)
T 1tzs_A 191 SLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSD 239 (351)
T ss_dssp CCEEEECSEETTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEecCCCceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHH
Confidence 44566776 566554 677762 24568999999999999854
No 63
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=32.08 E-value=59 Score=28.44 Aligned_cols=40 Identities=20% Similarity=0.395 Sum_probs=28.5
Q ss_pred ceeEEeee--ceEEEE---EEeCCC-----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP-----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP-----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 179 ~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 228 (329)
T 1htr_B 179 QIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQ 228 (329)
T ss_dssp EEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGG
T ss_pred ceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHH
Confidence 34556766 556554 677761 34578999999999999865
No 64
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=31.66 E-value=57 Score=28.37 Aligned_cols=40 Identities=15% Similarity=0.309 Sum_probs=27.7
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.- +....+++|||++++++|..
T Consensus 176 ~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 224 (320)
T 4aa9_A 176 SLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPSS 224 (320)
T ss_dssp EEEEEECSSBTTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEEEHH
T ss_pred ceEEEEcccCCceEEEEeEEEECCEEeccCCCcEEEEECCCCcEECCHH
Confidence 34456665 456554 667752 24568999999999999854
No 65
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=31.52 E-value=74 Score=27.73 Aligned_cols=39 Identities=21% Similarity=0.342 Sum_probs=28.2
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.- .+ ..++||||++++++|..
T Consensus 178 ~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~-~~aiiDSGTt~~~lp~~ 225 (324)
T 1am5_A 178 SIHWIPVTAEKYWQVALDGITVNGQTAACEG-CQAIVDTGTSKIVAPVS 225 (324)
T ss_dssp CCEEEEEEEETTEEEEECEEEETTEECCCCC-EEEEECTTCSSEEECTT
T ss_pred ceEEEecCCCcEEEEEEeEEEECCceeeccC-ceEEEecCCccEECCHH
Confidence 45567776 566554 677761 22 78999999999999865
No 66
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=31.49 E-value=32 Score=24.75 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=23.2
Q ss_pred eEEEeeEEEecCEEeecCCCcEEEecCCcceeeCH
Q 019819 212 YILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTS 246 (335)
Q Consensus 212 ~~v~l~~i~v~~~~~~~~~~~~iiDtGt~~~~lp~ 246 (335)
|+=.+..|.++|+.+ .+++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~-----eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLK-----EALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEE-----EEEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEE-----EEEeccCCCcEEEec
Confidence 444566788898865 489999999998874
No 67
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=30.62 E-value=69 Score=29.78 Aligned_cols=40 Identities=18% Similarity=0.235 Sum_probs=27.6
Q ss_pred ceeEEeee--ceEEEE--EEeCCCC-cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN--LTVGKPP-KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~--i~iGtP~-q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||... ....+++|||++++++|..
T Consensus 305 ~l~~~pv~~~~~w~V~l~I~Vgg~~~~~~~aIiDSGTsl~~lP~~ 349 (453)
T 2bju_A 305 PLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTD 349 (453)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTEEEEEEEEEECTTCCSEEECHH
T ss_pred ceEEEecCCCceEEEEEEEEECcEEeccccEEEcCCCCeEecCHH
Confidence 44566776 556555 6677610 2367999999999999854
No 68
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=30.10 E-value=53 Score=29.55 Aligned_cols=40 Identities=13% Similarity=0.274 Sum_probs=27.3
Q ss_pred ceeEEeee--ceEEEE--EEeCCCC-cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN--LTVGKPP-KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~--i~iGtP~-q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.+. |.||.-. ....+++|||++++++|..
T Consensus 229 ~l~~~p~~~~~~w~v~l~i~v~g~~~~~~~aiiDSGTs~~~lP~~ 273 (375)
T 1miq_A 229 NITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSE 273 (375)
T ss_dssp EEEEEEBSSSSSSEEEEEEEETTEEEEEEEEEECTTBSSEEECHH
T ss_pred ceEEEecCCCceEEEEEEEEECCEEcccceEEecCCCccEEcCHH
Confidence 44556776 455554 6677511 2467999999999999854
No 69
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=29.57 E-value=51 Score=28.97 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=27.8
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.- +....++||||++++++|..
T Consensus 189 ~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 237 (341)
T 3k1w_A 189 NFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 237 (341)
T ss_dssp EEEEEECSSTTSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEecCCCCEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHH
Confidence 34456665 556554 567763 24578999999999999854
No 70
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=29.11 E-value=69 Score=28.42 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=27.5
Q ss_pred ceeEEeee--c----eEEEE---EEeCCC----CcEEEEE-EeCCCCceeEeCC
Q 019819 7 EFFFFPIF--S----YFAVN---LTVGKP----PKLFDFD-FDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~----~y~~~---i~iGtP----~q~~~v~-~DTGS~~~Wv~~~ 46 (335)
.....|+. . .|.++ |.||.- .....++ ||||++++++|..
T Consensus 195 ~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~ 248 (361)
T 1mpp_A 195 DIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSS 248 (361)
T ss_dssp CCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHH
T ss_pred ceEEEEcccCCCceeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHH
Confidence 45566776 2 56554 678762 1235688 9999999999854
No 71
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=28.72 E-value=66 Score=28.84 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=28.5
Q ss_pred ceeEEeee--ceEEEE---EEeCCC----CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP----PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 46 (335)
+...+|+. ..|.+. |.||.- .....+++|||++++++|..
T Consensus 222 ~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (370)
T 3psg_A 222 SLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTS 270 (370)
T ss_dssp CCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEHH
T ss_pred cceeecccccceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCHH
Confidence 45566776 556554 567752 24568999999999999854
No 72
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=28.66 E-value=66 Score=28.12 Aligned_cols=40 Identities=20% Similarity=0.452 Sum_probs=26.9
Q ss_pred ceeEEeee--ceEEEE---EEeCCC---CcEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKP---PKLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP---~q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.++ |.||.- .....+++|||++++++|..
T Consensus 182 ~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1dpj_A 182 DITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSG 229 (329)
T ss_dssp EEEEEECSSBTTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECHH
T ss_pred ceEEEEcCCCceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCHH
Confidence 34456665 556554 667752 13457999999999999854
No 73
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=26.08 E-value=64 Score=26.51 Aligned_cols=26 Identities=31% Similarity=0.409 Sum_probs=22.9
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEeC
Q 019819 18 AVNLTVGKPPKLFDFDFDTGSDLTWVQC 45 (335)
Q Consensus 18 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 45 (335)
.+++.||. |...+++|||..++-+..
T Consensus 114 ~~~iki~G--q~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIGG--QLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred cEEEEECC--EEEeeeecccCCceeeec
Confidence 67889998 999999999999998853
No 74
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=26.04 E-value=64 Score=29.24 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=26.0
Q ss_pred ceeEEeee----ceEEEE---EEeCC------CCcEE--------EEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF----SYFAVN---LTVGK------PPKLF--------DFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~----~~y~~~---i~iGt------P~q~~--------~v~~DTGS~~~Wv~~~ 46 (335)
+....||. ..|.++ |.||. |+..+ .++||||+++++++..
T Consensus 216 ~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 216 DLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp TEEEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHH
T ss_pred ceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 56677876 356665 66776 11111 2899999999999853
No 75
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=24.13 E-value=70 Score=28.04 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=26.3
Q ss_pred ceeEEeee--ceEEEE---EEeCCCC--cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKPP--KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP~--q~~~v~~DTGS~~~Wv~~~ 46 (335)
....+|+. ..|.++ |.||.-. ....+++|||++++++|..
T Consensus 183 ~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 183 TLTALPVTSSVELRVHLGSINFDGTSVSTNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEEECCCSSSCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECHH
T ss_pred ceEEEEccCCCeEEEEEeEEEECCEeccCCccEEEeCCCCcEecCHH
Confidence 34456666 445443 6777621 2246899999999999854
No 76
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=22.94 E-value=75 Score=27.92 Aligned_cols=40 Identities=15% Similarity=0.266 Sum_probs=26.6
Q ss_pred ceeEEeee--ceEEE---EEEeCCCC--cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAV---NLTVGKPP--KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~---~i~iGtP~--q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.+ .|.||.-. ....++||||++++++|..
T Consensus 183 ~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 183 SLVDLPITSEKKLTVGLRSVNVRGRNVDANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp CCEEEECCCSSSCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECHH
T ss_pred ceEEEeccCCceEEEEEeEEEECCEecCCCcCEEEeCCCCCEEcCHH
Confidence 44566776 34544 36777621 2346899999999999854
No 77
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=22.19 E-value=90 Score=27.29 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=27.2
Q ss_pred ceeEEeee--ceEEEE---EEeCCCC--cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAVN---LTVGKPP--KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~~---i~iGtP~--q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.++ |.||.-. ....++||||++++++|..
T Consensus 185 ~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~iiDSGtt~~~lP~~ 231 (339)
T 3fv3_A 185 KLVAEQVTSSQALTISLASVNLKGSSFSFGDGALLDSGTTLTYFPSD 231 (339)
T ss_dssp CCEEEEBCCSSSCEEEEEEEEESSCEEEEEEEEEECTTBSSEEECHH
T ss_pred ceEEEecccCccEEEEEEEEEECCEeecCCccEEEeCCCCCEecCHH
Confidence 45566776 455544 6677631 2346999999999999854
No 78
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=21.38 E-value=1.2e+02 Score=26.37 Aligned_cols=40 Identities=20% Similarity=0.407 Sum_probs=26.9
Q ss_pred ceeEEeee--ceEEE---EEEeCCCC---cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAV---NLTVGKPP---KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~---~i~iGtP~---q~~~v~~DTGS~~~Wv~~~ 46 (335)
+....|+. ..|.+ .|.||.-. ....++||||++++++|..
T Consensus 182 ~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~ 229 (342)
T 3pvk_A 182 SLIALPVTSDRELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQD 229 (342)
T ss_dssp CCEEEECCCSSSCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECHH
T ss_pred eeEEeecCccceEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCHH
Confidence 44566776 44544 36677621 2267999999999999854
No 79
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=20.87 E-value=49 Score=29.87 Aligned_cols=40 Identities=15% Similarity=0.245 Sum_probs=26.2
Q ss_pred ceeEEeee--ceEEE---EEEeCCC-----C---cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAV---NLTVGKP-----P---KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~---~i~iGtP-----~---q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.+ .|.||.- . +...++||||++++++|..
T Consensus 196 ~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 248 (395)
T 2qp8_A 196 SLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 248 (395)
T ss_dssp EEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred ceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCHH
Confidence 34456766 44543 4778762 1 1246899999999999854
No 80
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=20.45 E-value=68 Score=28.97 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=26.2
Q ss_pred ceeEEeee--ceEEE---EEEeCCCC--------cEEEEEEeCCCCceeEeCC
Q 019819 7 EFFFFPIF--SYFAV---NLTVGKPP--------KLFDFDFDTGSDLTWVQCD 46 (335)
Q Consensus 7 ~~~~~Pl~--~~y~~---~i~iGtP~--------q~~~v~~DTGS~~~Wv~~~ 46 (335)
.....|+. ..|.+ .|.||.-. ....++||||++++++|..
T Consensus 203 ~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 203 SLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp EEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred ceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 34456766 45544 46777521 1236999999999999844
Done!