Query 019822
Match_columns 335
No_of_seqs 139 out of 1596
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 04:49:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019822.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019822hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 2.7E-56 5.9E-61 388.2 27.4 322 5-335 42-366 (366)
2 COG1064 AdhP Zn-dependent alco 100.0 2.5E-56 5.3E-61 396.8 27.1 292 5-335 43-337 (339)
3 KOG0022 Alcohol dehydrogenase, 100.0 3.4E-53 7.4E-58 363.0 28.5 326 5-335 47-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.7E-50 3.7E-55 349.0 25.9 302 5-334 44-351 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 2.9E-48 6.2E-53 334.3 24.6 300 5-335 51-354 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.6E-46 3.5E-51 349.9 31.9 321 5-333 48-370 (371)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 4.5E-46 9.8E-51 346.4 31.0 325 6-335 42-368 (368)
8 cd08300 alcohol_DH_class_III c 100.0 1.7E-45 3.6E-50 342.8 31.3 325 5-334 42-368 (368)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 8.1E-45 1.8E-49 337.0 30.2 316 6-335 42-358 (358)
10 PLN02740 Alcohol dehydrogenase 100.0 7E-45 1.5E-49 339.9 29.6 324 5-335 50-381 (381)
11 cd08239 THR_DH_like L-threonin 100.0 1.5E-44 3.2E-49 332.9 30.5 298 6-335 40-339 (339)
12 cd08301 alcohol_DH_plants Plan 100.0 3.1E-44 6.7E-49 334.4 31.4 324 5-334 42-369 (369)
13 cd08277 liver_alcohol_DH_like 100.0 3.7E-44 8.1E-49 333.3 30.2 323 6-334 43-365 (365)
14 COG1063 Tdh Threonine dehydrog 100.0 9.8E-44 2.1E-48 327.0 30.2 306 5-335 40-350 (350)
15 PRK09880 L-idonate 5-dehydroge 100.0 1.5E-43 3.2E-48 326.6 29.8 298 5-335 42-343 (343)
16 PLN02827 Alcohol dehydrogenase 100.0 2.9E-43 6.3E-48 328.3 30.1 313 18-335 62-376 (378)
17 PLN02586 probable cinnamyl alc 100.0 7.6E-42 1.6E-46 316.9 28.8 294 5-335 52-353 (360)
18 TIGR02819 fdhA_non_GSH formald 100.0 7.8E-42 1.7E-46 319.5 28.5 305 6-335 49-390 (393)
19 TIGR03366 HpnZ_proposed putati 100.0 2.9E-42 6.2E-47 309.3 24.2 270 22-316 1-280 (280)
20 TIGR03201 dearomat_had 6-hydro 100.0 1.6E-41 3.5E-46 313.8 29.7 299 6-335 39-349 (349)
21 PLN02178 cinnamyl-alcohol dehy 100.0 1.3E-41 2.9E-46 316.4 29.0 294 5-335 46-348 (375)
22 PRK10309 galactitol-1-phosphat 100.0 4.6E-41 1E-45 310.6 30.5 287 19-335 53-346 (347)
23 COG0604 Qor NADPH:quinone redu 100.0 1E-41 2.2E-46 309.8 23.9 277 5-335 42-326 (326)
24 cd08231 MDR_TM0436_like Hypoth 100.0 1.3E-40 2.9E-45 309.2 30.8 311 6-335 41-361 (361)
25 TIGR02822 adh_fam_2 zinc-bindi 100.0 6.9E-41 1.5E-45 306.9 27.3 285 5-333 42-328 (329)
26 cd05279 Zn_ADH1 Liver alcohol 100.0 2.1E-40 4.6E-45 308.1 30.4 320 6-334 41-365 (365)
27 cd08299 alcohol_DH_class_I_II_ 100.0 2.9E-39 6.4E-44 301.1 31.5 324 5-335 47-373 (373)
28 cd08233 butanediol_DH_like (2R 100.0 5.9E-39 1.3E-43 297.0 30.8 284 19-334 64-351 (351)
29 cd08230 glucose_DH Glucose deh 100.0 2.6E-39 5.6E-44 299.8 28.2 294 5-335 40-355 (355)
30 KOG1197 Predicted quinone oxid 100.0 2E-40 4.3E-45 276.4 17.4 274 4-334 49-329 (336)
31 PLN02514 cinnamyl-alcohol dehy 100.0 1.4E-38 3E-43 295.0 28.8 298 6-335 50-350 (357)
32 cd08279 Zn_ADH_class_III Class 100.0 1.2E-37 2.5E-42 289.6 31.6 321 6-333 41-362 (363)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 1.3E-37 2.7E-42 288.1 30.1 304 6-335 40-351 (351)
34 cd08278 benzyl_alcohol_DH Benz 100.0 1.1E-37 2.4E-42 289.9 29.6 320 5-334 42-365 (365)
35 cd08296 CAD_like Cinnamyl alco 100.0 4E-37 8.7E-42 282.7 28.5 291 6-334 41-333 (333)
36 cd08237 ribitol-5-phosphate_DH 100.0 7.9E-38 1.7E-42 288.2 23.6 284 5-335 40-339 (341)
37 cd08283 FDH_like_1 Glutathione 100.0 1.6E-36 3.5E-41 284.0 30.5 316 5-335 40-386 (386)
38 cd08286 FDH_like_ADH2 formalde 100.0 1.9E-36 4.2E-41 279.5 30.1 301 5-335 40-345 (345)
39 cd05278 FDH_like Formaldehyde 100.0 1.3E-36 2.9E-41 280.6 28.2 302 6-335 41-347 (347)
40 cd05284 arabinose_DH_like D-ar 100.0 1.8E-36 3.8E-41 279.1 28.9 294 6-335 41-340 (340)
41 PRK10083 putative oxidoreducta 100.0 2.8E-36 6.2E-41 277.7 29.1 295 6-335 40-337 (339)
42 cd08246 crotonyl_coA_red croto 100.0 9.8E-36 2.1E-40 279.6 29.5 284 21-333 83-391 (393)
43 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.5E-35 3.3E-40 274.1 29.6 285 18-333 61-350 (350)
44 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.3E-35 7.1E-40 275.1 30.2 290 17-333 85-383 (384)
45 cd08238 sorbose_phosphate_red 100.0 3E-35 6.5E-40 277.4 29.3 278 18-335 61-368 (410)
46 cd08260 Zn_ADH6 Alcohol dehydr 100.0 5.1E-35 1.1E-39 270.0 29.5 298 7-334 42-344 (345)
47 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3.7E-35 8E-40 273.3 28.7 318 6-334 41-367 (367)
48 cd08287 FDH_like_ADH3 formalde 100.0 6.8E-35 1.5E-39 269.1 30.2 299 5-335 40-345 (345)
49 cd08284 FDH_like_2 Glutathione 100.0 5.9E-35 1.3E-39 269.4 29.3 301 6-334 41-343 (344)
50 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.6E-35 1.2E-39 270.3 28.8 285 18-335 65-350 (350)
51 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.4E-34 3E-39 266.3 30.4 296 6-335 40-337 (337)
52 cd05285 sorbitol_DH Sorbitol d 100.0 1.1E-34 2.5E-39 267.5 29.6 285 18-334 53-342 (343)
53 cd08235 iditol_2_DH_like L-idi 100.0 1.2E-34 2.5E-39 267.4 29.1 298 6-334 40-343 (343)
54 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.8E-35 3.8E-40 268.8 23.2 264 5-334 41-308 (308)
55 TIGR01751 crot-CoA-red crotony 100.0 2.2E-34 4.7E-39 270.7 29.2 283 22-334 80-386 (398)
56 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.2E-34 9.1E-39 262.8 28.8 294 7-335 43-338 (338)
57 PLN02702 L-idonate 5-dehydroge 100.0 8.8E-34 1.9E-38 263.7 30.4 286 19-335 73-364 (364)
58 cd08282 PFDH_like Pseudomonas 100.0 7.7E-34 1.7E-38 265.0 29.9 303 6-335 41-375 (375)
59 cd05283 CAD1 Cinnamyl alcohol 100.0 4.3E-34 9.4E-39 263.1 26.9 296 6-334 40-337 (337)
60 cd08297 CAD3 Cinnamyl alcohol 100.0 1.1E-33 2.4E-38 260.7 29.3 295 7-335 43-341 (341)
61 PRK05396 tdh L-threonine 3-deh 100.0 1.5E-33 3.2E-38 259.9 29.6 284 18-334 56-339 (341)
62 cd08242 MDR_like Medium chain 100.0 9.7E-34 2.1E-38 258.7 27.9 279 6-335 40-319 (319)
63 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.7E-33 3.7E-38 259.4 29.1 277 18-334 62-341 (341)
64 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.5E-33 3.2E-38 259.0 28.1 297 6-335 43-342 (342)
65 PRK13771 putative alcohol dehy 100.0 1E-33 2.2E-38 260.1 26.2 289 6-334 41-332 (334)
66 PRK09422 ethanol-active dehydr 100.0 3.3E-33 7.1E-38 257.2 28.6 291 7-334 42-335 (338)
67 PLN03154 putative allyl alcoho 100.0 1.4E-33 3.1E-38 260.4 26.2 258 18-335 71-345 (348)
68 cd08232 idonate-5-DH L-idonate 100.0 4.5E-33 9.7E-38 256.4 29.4 285 18-335 52-339 (339)
69 cd08236 sugar_DH NAD(P)-depend 100.0 3.6E-33 7.9E-38 257.4 28.7 298 6-333 40-343 (343)
70 cd08291 ETR_like_1 2-enoyl thi 100.0 1.1E-33 2.5E-38 258.9 24.8 269 6-333 46-323 (324)
71 cd05281 TDH Threonine dehydrog 100.0 6.3E-33 1.4E-37 255.7 28.8 285 18-335 56-341 (341)
72 TIGR00692 tdh L-threonine 3-de 100.0 9.2E-33 2E-37 254.5 29.8 286 18-335 54-340 (340)
73 cd08292 ETR_like_2 2-enoyl thi 100.0 4E-33 8.6E-38 254.9 25.7 270 7-334 45-324 (324)
74 KOG0025 Zn2+-binding dehydroge 100.0 1.9E-33 4.2E-38 238.7 21.2 268 2-325 58-340 (354)
75 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-32 2.9E-37 252.1 28.5 290 6-334 41-332 (332)
76 cd08274 MDR9 Medium chain dehy 100.0 8.4E-33 1.8E-37 255.6 25.9 274 17-335 75-350 (350)
77 cd08234 threonine_DH_like L-th 100.0 3.4E-32 7.4E-37 249.9 29.0 293 6-333 40-333 (334)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.5E-32 3.3E-37 251.4 26.2 268 18-329 53-321 (325)
79 cd08245 CAD Cinnamyl alcohol d 100.0 1.7E-32 3.6E-37 251.7 26.5 288 7-333 41-330 (330)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 1.7E-32 3.6E-37 251.5 26.3 281 7-332 46-328 (329)
81 cd08293 PTGR2 Prostaglandin re 100.0 1.4E-31 2.9E-36 247.2 26.8 259 18-335 67-345 (345)
82 cd08295 double_bond_reductase_ 100.0 8.5E-32 1.8E-36 247.9 24.7 271 6-335 53-338 (338)
83 TIGR02825 B4_12hDH leukotriene 100.0 1.7E-31 3.8E-36 244.5 25.4 261 11-334 49-325 (325)
84 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.2E-31 4.7E-36 241.9 25.4 259 9-299 45-306 (306)
85 cd08276 MDR7 Medium chain dehy 100.0 1.7E-30 3.8E-35 238.4 27.7 288 10-335 47-336 (336)
86 cd08244 MDR_enoyl_red Possible 100.0 1.6E-30 3.5E-35 237.6 26.2 262 18-335 58-324 (324)
87 cd05282 ETR_like 2-enoyl thioe 100.0 1.6E-30 3.4E-35 237.6 25.1 268 10-334 46-323 (323)
88 cd05188 MDR Medium chain reduc 100.0 1.3E-30 2.9E-35 231.6 24.0 255 6-295 15-270 (271)
89 cd08294 leukotriene_B4_DH_like 100.0 1.7E-30 3.7E-35 238.1 25.3 254 18-335 58-329 (329)
90 cd08269 Zn_ADH9 Alcohol dehydr 100.0 7E-30 1.5E-34 232.2 27.5 271 6-333 35-311 (312)
91 PRK10754 quinone oxidoreductas 100.0 1.8E-30 4E-35 237.8 22.5 275 6-334 44-326 (327)
92 cd08290 ETR 2-enoyl thioester 100.0 3.4E-30 7.3E-35 237.4 22.9 260 19-335 63-341 (341)
93 PTZ00354 alcohol dehydrogenase 100.0 6.6E-30 1.4E-34 234.5 24.7 260 18-334 57-327 (334)
94 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.1E-29 2.3E-34 233.5 24.4 268 8-334 47-334 (336)
95 KOG1198 Zinc-binding oxidoredu 100.0 2.9E-30 6.2E-35 235.1 18.9 224 103-335 104-345 (347)
96 cd08243 quinone_oxidoreductase 100.0 4.2E-29 9.2E-34 227.5 23.9 269 8-333 45-319 (320)
97 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 9.3E-29 2E-33 226.1 25.9 274 6-335 43-325 (325)
98 cd08255 2-desacetyl-2-hydroxye 100.0 1.3E-28 2.9E-33 220.3 25.1 253 11-333 13-277 (277)
99 cd05286 QOR2 Quinone oxidoredu 100.0 2.4E-28 5.2E-33 221.9 26.3 261 18-335 53-320 (320)
100 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-28 2.7E-33 225.8 23.1 266 9-334 49-329 (329)
101 cd08270 MDR4 Medium chain dehy 100.0 3.2E-28 6.9E-33 220.7 24.6 249 20-335 52-305 (305)
102 cd08249 enoyl_reductase_like e 100.0 5.2E-28 1.1E-32 222.8 26.1 272 6-335 42-339 (339)
103 TIGR02823 oxido_YhdH putative 100.0 8.2E-28 1.8E-32 219.8 26.6 273 6-335 42-323 (323)
104 cd08289 MDR_yhfp_like Yhfp put 100.0 1.4E-27 3E-32 218.5 27.4 263 18-335 56-326 (326)
105 cd08251 polyketide_synthase po 100.0 6.6E-28 1.4E-32 217.7 24.7 267 9-332 26-302 (303)
106 cd05276 p53_inducible_oxidored 100.0 1.1E-27 2.5E-32 217.7 24.6 265 11-332 48-322 (323)
107 COG2130 Putative NADP-dependen 100.0 1.1E-27 2.3E-32 205.8 21.3 223 104-335 102-338 (340)
108 cd08252 AL_MDR Arginate lyase 100.0 2.3E-27 5E-32 218.0 24.9 268 11-334 51-336 (336)
109 smart00829 PKS_ER Enoylreducta 100.0 1.3E-27 2.9E-32 213.8 22.4 265 6-332 13-287 (288)
110 cd08253 zeta_crystallin Zeta-c 100.0 4.5E-27 9.8E-32 214.1 25.9 276 6-335 43-325 (325)
111 TIGR02824 quinone_pig3 putativ 100.0 3.4E-27 7.4E-32 215.0 24.7 260 18-334 56-324 (325)
112 cd08268 MDR2 Medium chain dehy 100.0 1.1E-26 2.4E-31 212.0 26.6 276 7-334 44-327 (328)
113 cd05195 enoyl_red enoyl reduct 100.0 7.1E-27 1.5E-31 209.2 22.8 256 18-332 26-292 (293)
114 cd05288 PGDH Prostaglandin deh 100.0 1.5E-26 3.2E-31 212.1 23.8 251 20-333 65-329 (329)
115 cd08247 AST1_like AST1 is a cy 100.0 2.8E-26 6E-31 212.4 25.2 264 19-335 58-352 (352)
116 KOG1202 Animal-type fatty acid 100.0 4.6E-28 1E-32 235.5 13.1 265 5-335 1459-1741(2376)
117 cd08272 MDR6 Medium chain dehy 100.0 3E-26 6.4E-31 209.1 23.4 260 18-335 56-326 (326)
118 cd08271 MDR5 Medium chain dehy 99.9 3.2E-26 7E-31 209.0 23.2 258 19-335 56-325 (325)
119 cd08288 MDR_yhdh Yhdh putative 99.9 7.7E-26 1.7E-30 206.8 25.7 272 7-335 44-324 (324)
120 cd08241 QOR1 Quinone oxidoredu 99.9 7.9E-26 1.7E-30 205.7 24.3 258 19-333 57-322 (323)
121 cd08248 RTN4I1 Human Reticulon 99.9 9.6E-26 2.1E-30 208.4 22.6 256 18-333 72-349 (350)
122 cd08273 MDR8 Medium chain dehy 99.9 9E-26 1.9E-30 206.9 21.6 263 9-333 46-330 (331)
123 cd08275 MDR3 Medium chain dehy 99.9 3.9E-25 8.4E-30 202.9 25.5 259 18-335 55-337 (337)
124 cd05289 MDR_like_2 alcohol deh 99.9 3.2E-25 6.9E-30 200.6 20.9 249 18-332 58-308 (309)
125 cd08267 MDR1 Medium chain dehy 99.9 1.6E-24 3.5E-29 197.3 23.4 254 19-332 58-318 (319)
126 KOG1196 Predicted NAD-dependen 99.9 2E-23 4.3E-28 178.9 19.6 247 27-334 78-339 (343)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 2.8E-18 6.1E-23 135.8 13.4 129 161-297 1-129 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.7 1.1E-17 2.3E-22 128.3 4.2 92 6-119 17-109 (109)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.7E-12 3.8E-17 120.5 18.1 174 139-334 189-375 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 7.8E-12 1.7E-16 119.0 14.6 155 148-308 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 2.7E-12 5.9E-17 101.0 4.5 120 194-333 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 3.9E-07 8.5E-12 81.3 9.7 162 145-323 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.6 9.7E-07 2.1E-11 84.3 12.7 108 149-258 162-288 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.5 1.6E-08 3.5E-13 95.5 -2.1 159 23-234 90-252 (417)
135 PRK08306 dipicolinate synthase 98.3 1.6E-05 3.5E-10 71.7 13.8 95 150-258 151-245 (296)
136 PRK05476 S-adenosyl-L-homocyst 98.3 2E-05 4.3E-10 73.9 14.5 103 138-257 198-302 (425)
137 PRK00517 prmA ribosomal protei 98.2 2.2E-05 4.7E-10 69.2 11.7 134 104-257 78-216 (250)
138 TIGR00936 ahcY adenosylhomocys 98.2 4.2E-05 9.2E-10 71.4 13.3 102 139-257 182-285 (406)
139 PRK00045 hemA glutamyl-tRNA re 98.1 1.3E-07 2.8E-12 89.6 -3.7 159 23-234 92-254 (423)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.5E-05 3.2E-10 72.6 9.3 108 114-235 139-251 (311)
141 PLN02494 adenosylhomocysteinas 98.0 8.8E-05 1.9E-09 70.0 12.0 102 139-257 241-344 (477)
142 TIGR00518 alaDH alanine dehydr 97.8 0.00023 5E-09 66.2 11.3 99 150-258 166-271 (370)
143 COG2518 Pcm Protein-L-isoaspar 97.8 0.0002 4.3E-09 60.2 9.4 116 127-255 51-170 (209)
144 TIGR02853 spore_dpaA dipicolin 97.8 0.00063 1.4E-08 61.0 13.1 95 150-258 150-244 (287)
145 TIGR00406 prmA ribosomal prote 97.7 0.00028 6E-09 63.5 10.7 98 148-257 157-262 (288)
146 PF01488 Shikimate_DH: Shikima 97.7 0.00014 3E-09 57.7 7.6 98 148-256 9-111 (135)
147 PTZ00075 Adenosylhomocysteinas 97.7 0.00041 9E-09 65.7 11.3 101 140-257 242-344 (476)
148 PRK08324 short chain dehydroge 97.6 0.0007 1.5E-08 68.4 12.4 139 104-258 386-561 (681)
149 COG4221 Short-chain alcohol de 97.6 0.00052 1.1E-08 58.9 9.5 80 150-232 5-91 (246)
150 PRK12771 putative glutamate sy 97.6 0.00013 2.8E-09 72.0 6.3 80 147-234 133-234 (564)
151 COG2264 PrmA Ribosomal protein 97.4 0.002 4.4E-08 57.4 10.9 131 113-258 129-267 (300)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.3 0.006 1.3E-07 52.8 12.9 104 150-257 4-138 (238)
153 PRK00377 cbiT cobalt-precorrin 97.3 0.0049 1.1E-07 52.1 11.5 102 144-253 34-144 (198)
154 COG3967 DltE Short-chain dehyd 97.2 0.0023 5E-08 53.3 8.9 76 150-231 4-87 (245)
155 COG0300 DltE Short-chain dehyd 97.2 0.0025 5.4E-08 56.0 9.6 80 149-232 4-94 (265)
156 PRK11705 cyclopropane fatty ac 97.2 0.0032 7E-08 58.9 10.5 113 131-255 148-268 (383)
157 PF11017 DUF2855: Protein of u 97.2 0.017 3.8E-07 51.9 14.4 140 104-258 90-235 (314)
158 COG2242 CobL Precorrin-6B meth 97.1 0.0072 1.6E-07 49.9 10.4 102 144-256 28-137 (187)
159 PF06325 PrmA: Ribosomal prote 97.1 0.0046 9.9E-08 55.5 10.1 127 112-258 127-263 (295)
160 PF13460 NAD_binding_10: NADH( 97.1 0.0083 1.8E-07 49.7 11.1 94 154-258 1-101 (183)
161 PRK04148 hypothetical protein; 97.1 0.0057 1.2E-07 47.9 9.0 89 146-245 12-100 (134)
162 PRK13943 protein-L-isoaspartat 97.0 0.0091 2E-07 54.4 11.6 102 143-253 73-179 (322)
163 COG1748 LYS9 Saccharopine dehy 97.0 0.0086 1.9E-07 55.6 11.4 97 152-257 2-102 (389)
164 PRK05993 short chain dehydroge 97.0 0.0076 1.6E-07 53.7 10.5 78 150-231 3-85 (277)
165 PRK13940 glutamyl-tRNA reducta 96.9 0.0064 1.4E-07 57.4 10.1 76 148-234 178-254 (414)
166 TIGR00438 rrmJ cell division p 96.9 0.014 3.1E-07 48.9 11.2 100 146-254 28-146 (188)
167 PRK08177 short chain dehydroge 96.9 0.0067 1.4E-07 52.2 9.3 77 152-232 2-81 (225)
168 PF12847 Methyltransf_18: Meth 96.9 0.00093 2E-08 50.7 3.5 93 150-253 1-110 (112)
169 PF00670 AdoHcyase_NAD: S-aden 96.9 0.011 2.4E-07 47.9 9.7 101 148-268 20-121 (162)
170 PRK12742 oxidoreductase; Provi 96.9 0.029 6.2E-07 48.5 13.1 77 150-232 5-85 (237)
171 PRK05693 short chain dehydroge 96.9 0.01 2.2E-07 52.8 10.3 78 152-232 2-82 (274)
172 PRK13942 protein-L-isoaspartat 96.8 0.023 5E-07 48.7 12.0 101 142-253 68-175 (212)
173 PRK00536 speE spermidine synth 96.8 0.0046 9.9E-08 54.5 7.5 99 149-255 71-172 (262)
174 PRK12549 shikimate 5-dehydroge 96.8 0.014 3.1E-07 52.3 10.8 43 149-191 125-167 (284)
175 PF01135 PCMT: Protein-L-isoas 96.8 0.0035 7.6E-08 53.5 6.5 101 142-253 64-171 (209)
176 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.016 3.6E-07 47.5 10.2 97 129-257 22-119 (168)
177 PRK14967 putative methyltransf 96.8 0.068 1.5E-06 46.1 14.6 98 144-254 30-159 (223)
178 PRK06139 short chain dehydroge 96.8 0.0068 1.5E-07 55.7 8.5 79 150-232 6-94 (330)
179 PRK13944 protein-L-isoaspartat 96.8 0.014 3.1E-07 49.6 9.9 101 142-253 64-172 (205)
180 KOG1209 1-Acyl dihydroxyaceton 96.7 0.01 2.2E-07 49.8 8.4 81 150-232 6-91 (289)
181 PF02826 2-Hacid_dh_C: D-isome 96.7 0.011 2.4E-07 49.1 8.9 91 148-255 33-128 (178)
182 PRK08017 oxidoreductase; Provi 96.7 0.0083 1.8E-07 52.6 8.5 76 152-231 3-83 (256)
183 KOG1205 Predicted dehydrogenas 96.7 0.02 4.3E-07 50.9 10.5 105 150-258 11-153 (282)
184 PLN02366 spermidine synthase 96.7 0.019 4.1E-07 52.0 10.7 101 148-254 89-206 (308)
185 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0076 1.7E-07 49.6 7.5 105 150-258 19-143 (168)
186 TIGR01809 Shik-DH-AROM shikima 96.7 0.0078 1.7E-07 54.0 8.1 76 150-233 124-201 (282)
187 TIGR02469 CbiT precorrin-6Y C5 96.7 0.041 8.9E-07 42.2 11.1 101 143-253 12-121 (124)
188 PRK06182 short chain dehydroge 96.6 0.014 3E-07 51.9 9.5 80 150-232 2-84 (273)
189 PRK07326 short chain dehydroge 96.6 0.041 8.8E-07 47.5 12.3 80 150-232 5-92 (237)
190 PF02353 CMAS: Mycolic acid cy 96.6 0.0023 5.1E-08 56.9 4.4 99 142-255 54-167 (273)
191 PRK07060 short chain dehydroge 96.6 0.016 3.6E-07 50.3 9.6 77 150-232 8-87 (245)
192 PLN03209 translocon at the inn 96.6 0.036 7.8E-07 54.1 12.6 47 144-191 73-120 (576)
193 PRK12939 short chain dehydroge 96.6 0.041 8.9E-07 47.9 12.0 80 150-232 6-94 (250)
194 PRK03369 murD UDP-N-acetylmura 96.6 0.018 4E-07 55.8 10.4 73 148-233 9-81 (488)
195 PRK07825 short chain dehydroge 96.5 0.02 4.3E-07 50.8 9.7 78 151-232 5-88 (273)
196 COG2230 Cfa Cyclopropane fatty 96.5 0.016 3.4E-07 51.4 8.7 104 138-258 60-180 (283)
197 PRK12550 shikimate 5-dehydroge 96.5 0.024 5.2E-07 50.4 9.9 70 146-231 117-187 (272)
198 PRK00107 gidB 16S rRNA methylt 96.5 0.054 1.2E-06 45.4 11.3 98 148-255 43-146 (187)
199 PRK07806 short chain dehydroge 96.5 0.045 9.7E-07 47.7 11.4 102 150-255 5-135 (248)
200 cd05311 NAD_bind_2_malic_enz N 96.5 0.055 1.2E-06 46.8 11.6 93 149-256 23-130 (226)
201 PRK06057 short chain dehydroge 96.4 0.022 4.8E-07 49.9 9.4 80 150-232 6-89 (255)
202 TIGR00080 pimt protein-L-isoas 96.4 0.011 2.5E-07 50.6 7.3 101 142-253 69-176 (215)
203 PRK08339 short chain dehydroge 96.4 0.026 5.7E-07 49.9 9.9 80 150-232 7-95 (263)
204 PF03446 NAD_binding_2: NAD bi 96.4 0.058 1.2E-06 44.1 11.2 90 152-257 2-97 (163)
205 PRK07109 short chain dehydroge 96.4 0.048 1E-06 50.1 11.9 79 150-232 7-95 (334)
206 PRK00811 spermidine synthase; 96.4 0.02 4.3E-07 51.4 9.0 95 149-253 75-190 (283)
207 PRK08265 short chain dehydroge 96.4 0.035 7.6E-07 48.9 10.6 80 150-232 5-90 (261)
208 PRK07904 short chain dehydroge 96.4 0.028 6.2E-07 49.4 9.8 82 148-232 5-97 (253)
209 PRK06949 short chain dehydroge 96.4 0.03 6.5E-07 49.1 9.9 81 149-232 7-96 (258)
210 PRK14027 quinate/shikimate deh 96.4 0.039 8.4E-07 49.4 10.5 43 149-191 125-167 (283)
211 PRK06196 oxidoreductase; Provi 96.4 0.028 6.2E-07 51.1 9.9 79 150-231 25-108 (315)
212 PRK06505 enoyl-(acyl carrier p 96.4 0.029 6.2E-07 49.9 9.7 78 150-231 6-94 (271)
213 PRK14175 bifunctional 5,10-met 96.4 0.039 8.4E-07 49.2 10.2 95 130-257 137-233 (286)
214 COG2227 UbiG 2-polyprenyl-3-me 96.3 0.042 9E-07 47.2 9.9 96 149-254 58-161 (243)
215 COG0373 HemA Glutamyl-tRNA red 96.3 0.034 7.4E-07 52.0 10.1 98 148-257 175-277 (414)
216 cd01065 NAD_bind_Shikimate_DH 96.3 0.028 6E-07 45.3 8.6 96 149-256 17-118 (155)
217 PRK05872 short chain dehydroge 96.3 0.029 6.4E-07 50.5 9.6 79 150-232 8-95 (296)
218 COG4122 Predicted O-methyltran 96.3 0.052 1.1E-06 46.4 10.4 108 144-257 53-169 (219)
219 cd01075 NAD_bind_Leu_Phe_Val_D 96.3 0.17 3.6E-06 42.9 13.5 82 149-245 26-108 (200)
220 PRK07831 short chain dehydroge 96.3 0.034 7.3E-07 49.0 9.7 81 148-232 14-107 (262)
221 PRK06953 short chain dehydroge 96.3 0.04 8.6E-07 47.2 9.9 77 152-232 2-80 (222)
222 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.033 7.1E-07 49.1 9.6 78 150-231 5-89 (263)
223 PRK00258 aroE shikimate 5-dehy 96.3 0.016 3.5E-07 51.8 7.6 94 149-253 121-220 (278)
224 PRK11207 tellurite resistance 96.3 0.019 4.1E-07 48.6 7.7 100 144-255 24-135 (197)
225 PRK07502 cyclohexadienyl dehyd 96.3 0.043 9.3E-07 49.8 10.5 91 152-255 7-101 (307)
226 COG0169 AroE Shikimate 5-dehyd 96.3 0.013 2.7E-07 52.3 6.8 45 149-193 124-168 (283)
227 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.01 2.3E-07 56.9 6.6 94 144-257 27-126 (450)
228 PRK12829 short chain dehydroge 96.2 0.028 6.2E-07 49.4 9.0 82 146-232 6-96 (264)
229 PF13241 NAD_binding_7: Putati 96.2 0.0071 1.5E-07 45.4 4.3 89 150-257 6-94 (103)
230 PRK05866 short chain dehydroge 96.2 0.039 8.5E-07 49.7 9.9 79 150-232 39-127 (293)
231 PRK04457 spermidine synthase; 96.2 0.059 1.3E-06 47.7 10.8 95 149-253 65-176 (262)
232 TIGR02356 adenyl_thiF thiazole 96.2 0.045 9.8E-07 46.4 9.7 35 150-184 20-54 (202)
233 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.077 1.7E-06 50.9 12.5 79 150-231 209-293 (450)
234 COG2519 GCD14 tRNA(1-methylade 96.2 0.046 1E-06 47.3 9.6 107 142-257 86-198 (256)
235 PRK09072 short chain dehydroge 96.2 0.044 9.6E-07 48.3 10.0 80 150-232 4-90 (263)
236 PRK06500 short chain dehydroge 96.2 0.038 8.3E-07 48.1 9.3 78 150-232 5-90 (249)
237 PRK08618 ornithine cyclodeamin 96.1 0.16 3.5E-06 46.5 13.6 102 149-265 125-232 (325)
238 COG0686 Ald Alanine dehydrogen 96.1 0.027 5.9E-07 50.1 8.0 98 150-258 167-272 (371)
239 PRK06180 short chain dehydroge 96.1 0.041 8.8E-07 49.0 9.5 80 150-232 3-88 (277)
240 PRK09291 short chain dehydroge 96.1 0.033 7.1E-07 48.8 8.8 73 151-231 2-82 (257)
241 PLN02781 Probable caffeoyl-CoA 96.1 0.05 1.1E-06 47.3 9.6 107 143-254 61-178 (234)
242 PRK07231 fabG 3-ketoacyl-(acyl 96.1 0.047 1E-06 47.5 9.6 80 150-232 4-91 (251)
243 PF03435 Saccharop_dh: Sacchar 96.1 0.046 9.9E-07 51.3 10.1 91 154-253 1-97 (386)
244 PRK07814 short chain dehydroge 96.1 0.044 9.6E-07 48.3 9.5 79 150-231 9-96 (263)
245 PRK07677 short chain dehydroge 96.1 0.042 9.2E-07 48.1 9.3 78 151-231 1-87 (252)
246 TIGR01470 cysG_Nterm siroheme 96.1 0.15 3.2E-06 43.4 12.2 91 150-253 8-99 (205)
247 PRK05867 short chain dehydroge 96.1 0.044 9.5E-07 48.0 9.4 79 150-232 8-96 (253)
248 TIGR01832 kduD 2-deoxy-D-gluco 96.1 0.059 1.3E-06 46.9 10.2 80 150-232 4-90 (248)
249 PLN02780 ketoreductase/ oxidor 96.1 0.043 9.4E-07 50.1 9.6 80 150-231 52-141 (320)
250 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.046 1E-06 48.1 9.5 79 150-231 4-88 (262)
251 PRK01581 speE spermidine synth 96.1 0.088 1.9E-06 48.5 11.2 100 148-255 148-269 (374)
252 PRK12548 shikimate 5-dehydroge 96.0 0.064 1.4E-06 48.3 10.3 37 149-185 124-160 (289)
253 PRK08267 short chain dehydroge 96.0 0.049 1.1E-06 47.9 9.5 78 152-232 2-87 (260)
254 PRK06841 short chain dehydroge 96.0 0.046 1E-06 47.8 9.2 80 150-232 14-99 (255)
255 cd01078 NAD_bind_H4MPT_DH NADP 96.0 0.099 2.2E-06 44.0 10.8 76 149-233 26-108 (194)
256 PRK08217 fabG 3-ketoacyl-(acyl 96.0 0.058 1.3E-06 46.9 9.8 79 150-231 4-91 (253)
257 PRK15116 sulfur acceptor prote 96.0 0.087 1.9E-06 46.7 10.6 35 150-184 29-63 (268)
258 TIGR01318 gltD_gamma_fam gluta 96.0 0.034 7.4E-07 53.6 8.8 77 150-233 140-237 (467)
259 COG1179 Dinucleotide-utilizing 96.0 0.063 1.4E-06 46.1 9.2 104 150-258 29-157 (263)
260 PF00899 ThiF: ThiF family; I 96.0 0.039 8.4E-07 43.5 7.6 34 151-184 2-35 (135)
261 PRK07533 enoyl-(acyl carrier p 96.0 0.057 1.2E-06 47.5 9.5 80 150-231 9-97 (258)
262 PRK07062 short chain dehydroge 95.9 0.055 1.2E-06 47.7 9.3 79 150-232 7-97 (265)
263 PRK08340 glucose-1-dehydrogena 95.9 0.067 1.5E-06 47.0 9.8 76 153-232 2-86 (259)
264 PRK07832 short chain dehydroge 95.9 0.19 4.2E-06 44.5 12.9 77 153-232 2-88 (272)
265 PRK06603 enoyl-(acyl carrier p 95.9 0.063 1.4E-06 47.4 9.5 79 149-231 6-95 (260)
266 COG0421 SpeE Spermidine syntha 95.9 0.073 1.6E-06 47.5 9.8 98 152-253 78-189 (282)
267 PRK07024 short chain dehydroge 95.9 0.075 1.6E-06 46.7 9.8 78 151-231 2-87 (257)
268 PRK08862 short chain dehydroge 95.9 0.075 1.6E-06 45.9 9.6 79 150-231 4-92 (227)
269 COG2910 Putative NADH-flavin r 95.9 0.039 8.5E-07 45.4 7.1 93 153-257 2-107 (211)
270 PRK06719 precorrin-2 dehydroge 95.9 0.15 3.3E-06 41.4 10.8 83 149-246 11-93 (157)
271 PRK06079 enoyl-(acyl carrier p 95.9 0.073 1.6E-06 46.7 9.7 78 150-231 6-92 (252)
272 PRK07478 short chain dehydroge 95.9 0.068 1.5E-06 46.8 9.5 80 150-232 5-93 (254)
273 TIGR00477 tehB tellurite resis 95.8 0.044 9.6E-07 46.2 7.7 101 142-255 22-134 (195)
274 PRK12475 thiamine/molybdopteri 95.8 0.072 1.6E-06 49.0 9.5 36 150-185 23-58 (338)
275 cd00757 ThiF_MoeB_HesA_family 95.8 0.09 1.9E-06 45.5 9.7 36 150-185 20-55 (228)
276 PRK05717 oxidoreductase; Valid 95.8 0.079 1.7E-06 46.4 9.5 80 150-232 9-94 (255)
277 PRK07576 short chain dehydroge 95.8 0.081 1.8E-06 46.7 9.7 80 149-231 7-95 (264)
278 PRK12809 putative oxidoreducta 95.8 0.058 1.3E-06 54.2 9.6 77 150-233 309-406 (639)
279 PRK06125 short chain dehydroge 95.7 0.11 2.3E-06 45.7 10.3 77 150-232 6-91 (259)
280 PRK06128 oxidoreductase; Provi 95.7 0.12 2.6E-06 46.7 10.7 79 150-232 54-144 (300)
281 TIGR02354 thiF_fam2 thiamine b 95.7 0.042 9.1E-07 46.6 7.2 35 150-184 20-54 (200)
282 PF02670 DXP_reductoisom: 1-de 95.7 0.16 3.4E-06 39.7 9.7 88 154-246 1-114 (129)
283 TIGR00507 aroE shikimate 5-deh 95.7 0.089 1.9E-06 46.8 9.7 92 149-255 115-215 (270)
284 PRK07454 short chain dehydroge 95.7 0.097 2.1E-06 45.3 9.8 80 150-232 5-93 (241)
285 COG2226 UbiE Methylase involve 95.7 0.22 4.8E-06 43.2 11.6 106 143-258 44-160 (238)
286 PRK06194 hypothetical protein; 95.7 0.048 1E-06 48.7 8.0 80 150-232 5-93 (287)
287 PRK06718 precorrin-2 dehydroge 95.7 0.27 5.8E-06 41.7 12.0 90 150-253 9-99 (202)
288 PRK07402 precorrin-6B methylas 95.7 0.28 6E-06 41.3 12.1 104 142-255 32-143 (196)
289 PRK08415 enoyl-(acyl carrier p 95.7 0.099 2.1E-06 46.6 9.8 104 150-258 4-147 (274)
290 PRK06483 dihydromonapterin red 95.7 0.1 2.2E-06 45.0 9.8 79 151-232 2-84 (236)
291 PRK08213 gluconate 5-dehydroge 95.7 0.095 2.1E-06 46.0 9.7 80 150-232 11-99 (259)
292 PRK08703 short chain dehydroge 95.6 0.062 1.3E-06 46.6 8.3 41 150-191 5-46 (239)
293 PLN00203 glutamyl-tRNA reducta 95.6 0.11 2.3E-06 50.7 10.5 73 150-233 265-340 (519)
294 PRK01683 trans-aconitate 2-met 95.6 0.16 3.5E-06 44.7 10.9 99 143-253 24-129 (258)
295 PRK12367 short chain dehydroge 95.6 0.069 1.5E-06 46.8 8.5 73 150-232 13-89 (245)
296 cd00755 YgdL_like Family of ac 95.6 0.11 2.3E-06 45.1 9.4 36 150-185 10-45 (231)
297 PRK06198 short chain dehydroge 95.6 0.08 1.7E-06 46.4 9.0 81 149-232 4-94 (260)
298 PRK05884 short chain dehydroge 95.6 0.1 2.2E-06 44.9 9.4 74 153-231 2-78 (223)
299 PRK12384 sorbitol-6-phosphate 95.6 0.095 2.1E-06 46.0 9.4 40 151-191 2-42 (259)
300 PRK08643 acetoin reductase; Va 95.6 0.1 2.2E-06 45.6 9.6 78 151-232 2-89 (256)
301 PRK12828 short chain dehydroge 95.6 0.095 2E-06 45.1 9.2 80 150-232 6-92 (239)
302 CHL00194 ycf39 Ycf39; Provisio 95.6 0.098 2.1E-06 47.6 9.6 95 153-256 2-111 (317)
303 PLN02476 O-methyltransferase 95.6 0.12 2.7E-06 45.9 9.8 108 143-255 111-229 (278)
304 PRK14103 trans-aconitate 2-met 95.5 0.2 4.4E-06 44.1 11.3 98 142-253 21-125 (255)
305 PRK08628 short chain dehydroge 95.5 0.098 2.1E-06 45.8 9.3 80 150-232 6-93 (258)
306 PRK07340 ornithine cyclodeamin 95.5 0.13 2.9E-06 46.6 10.3 105 149-268 123-231 (304)
307 PRK06172 short chain dehydroge 95.5 0.066 1.4E-06 46.8 8.2 79 150-232 6-94 (253)
308 PRK13394 3-hydroxybutyrate deh 95.5 0.078 1.7E-06 46.5 8.6 79 150-232 6-94 (262)
309 PF03807 F420_oxidored: NADP o 95.5 0.43 9.3E-06 34.8 11.3 85 153-253 1-93 (96)
310 PRK06138 short chain dehydroge 95.5 0.11 2.4E-06 45.2 9.5 80 150-232 4-91 (252)
311 PRK14192 bifunctional 5,10-met 95.5 0.14 3.1E-06 45.7 10.2 81 144-256 151-233 (283)
312 PRK08762 molybdopterin biosynt 95.5 0.12 2.5E-06 48.4 10.1 35 150-184 134-168 (376)
313 PRK07890 short chain dehydroge 95.5 0.079 1.7E-06 46.4 8.6 80 149-232 3-92 (258)
314 PRK05653 fabG 3-ketoacyl-(acyl 95.5 0.13 2.9E-06 44.3 9.9 80 150-232 4-92 (246)
315 PLN02823 spermine synthase 95.5 0.12 2.7E-06 47.3 9.9 100 150-253 103-219 (336)
316 PF01596 Methyltransf_3: O-met 95.5 0.044 9.5E-07 46.6 6.6 106 146-256 41-157 (205)
317 PRK06181 short chain dehydroge 95.5 0.066 1.4E-06 47.1 8.0 78 152-232 2-88 (263)
318 PRK00312 pcm protein-L-isoaspa 95.5 0.4 8.8E-06 40.8 12.6 99 143-254 71-175 (212)
319 PRK08159 enoyl-(acyl carrier p 95.5 0.14 3E-06 45.6 10.0 81 148-231 7-97 (272)
320 PRK12481 2-deoxy-D-gluconate 3 95.5 0.09 1.9E-06 46.1 8.7 79 150-232 7-93 (251)
321 PRK07063 short chain dehydroge 95.4 0.11 2.3E-06 45.7 9.2 80 150-232 6-96 (260)
322 PRK06101 short chain dehydroge 95.4 0.12 2.7E-06 44.8 9.5 75 152-231 2-80 (240)
323 PRK07453 protochlorophyllide o 95.4 0.12 2.5E-06 47.2 9.7 79 150-231 5-92 (322)
324 PRK12823 benD 1,6-dihydroxycyc 95.4 0.1 2.2E-06 45.8 9.0 79 150-231 7-93 (260)
325 TIGR02355 moeB molybdopterin s 95.4 0.1 2.2E-06 45.6 8.8 36 150-185 23-58 (240)
326 PRK09186 flagellin modificatio 95.4 0.13 2.9E-06 44.8 9.7 79 150-231 3-92 (256)
327 PRK07688 thiamine/molybdopteri 95.4 0.12 2.7E-06 47.5 9.7 36 150-185 23-58 (339)
328 PRK05876 short chain dehydroge 95.4 0.076 1.7E-06 47.3 8.2 78 150-231 5-92 (275)
329 PRK07774 short chain dehydroge 95.4 0.12 2.7E-06 44.9 9.4 78 150-232 5-93 (250)
330 PRK05447 1-deoxy-D-xylulose 5- 95.4 0.26 5.5E-06 45.8 11.5 95 152-252 2-120 (385)
331 PRK05875 short chain dehydroge 95.4 0.15 3.2E-06 45.2 10.0 40 150-190 6-46 (276)
332 PRK07035 short chain dehydroge 95.4 0.13 2.7E-06 45.0 9.4 79 150-231 7-94 (252)
333 PRK08589 short chain dehydroge 95.4 0.12 2.6E-06 45.8 9.4 79 150-232 5-92 (272)
334 PRK08690 enoyl-(acyl carrier p 95.4 0.13 2.8E-06 45.4 9.5 79 150-232 5-94 (261)
335 PRK06849 hypothetical protein; 95.4 1 2.3E-05 42.2 16.1 96 150-246 3-100 (389)
336 PRK07523 gluconate 5-dehydroge 95.3 0.16 3.4E-06 44.5 9.9 80 150-232 9-97 (255)
337 TIGR00138 gidB 16S rRNA methyl 95.3 0.14 3E-06 42.7 9.0 92 150-253 42-141 (181)
338 PRK08277 D-mannonate oxidoredu 95.3 0.13 2.9E-06 45.6 9.5 79 150-231 9-96 (278)
339 PRK06914 short chain dehydroge 95.3 0.13 2.9E-06 45.6 9.5 78 151-232 3-91 (280)
340 PRK07984 enoyl-(acyl carrier p 95.3 0.16 3.4E-06 45.0 9.8 78 150-231 5-93 (262)
341 TIGR03206 benzo_BadH 2-hydroxy 95.3 0.15 3.2E-06 44.4 9.6 79 150-231 2-89 (250)
342 PRK06484 short chain dehydroge 95.3 0.072 1.6E-06 52.0 8.3 79 150-232 4-89 (520)
343 PRK06124 gluconate 5-dehydroge 95.3 0.17 3.8E-06 44.2 10.1 79 150-232 10-98 (256)
344 PRK08328 hypothetical protein; 95.3 0.15 3.3E-06 44.2 9.4 36 150-185 26-61 (231)
345 PRK05854 short chain dehydroge 95.3 0.15 3.3E-06 46.3 9.9 40 150-190 13-53 (313)
346 PRK06482 short chain dehydroge 95.3 0.17 3.6E-06 44.9 10.0 78 152-232 3-86 (276)
347 PF02254 TrkA_N: TrkA-N domain 95.3 0.35 7.7E-06 36.6 10.5 92 154-253 1-95 (116)
348 COG0569 TrkA K+ transport syst 95.3 0.14 3.1E-06 44.2 9.1 74 153-233 2-77 (225)
349 PF00106 adh_short: short chai 95.3 0.1 2.2E-06 42.3 7.9 81 152-232 1-90 (167)
350 PRK12769 putative oxidoreducta 95.3 0.1 2.2E-06 52.6 9.4 76 150-232 326-422 (654)
351 PF01564 Spermine_synth: Sperm 95.2 0.11 2.3E-06 45.6 8.4 97 149-254 75-191 (246)
352 cd01487 E1_ThiF_like E1_ThiF_l 95.2 0.17 3.8E-06 41.8 9.1 33 153-185 1-33 (174)
353 PRK08317 hypothetical protein; 95.2 0.24 5.3E-06 42.6 10.6 103 142-255 11-125 (241)
354 PRK06179 short chain dehydroge 95.2 0.074 1.6E-06 47.0 7.5 76 151-232 4-83 (270)
355 PRK07577 short chain dehydroge 95.2 0.1 2.3E-06 44.8 8.2 75 150-232 2-78 (234)
356 PRK08263 short chain dehydroge 95.2 0.18 4E-06 44.7 10.0 79 151-232 3-87 (275)
357 TIGR01505 tartro_sem_red 2-hyd 95.2 0.23 4.9E-06 44.7 10.6 43 153-196 1-43 (291)
358 cd01483 E1_enzyme_family Super 95.2 0.17 3.6E-06 40.3 8.7 32 153-184 1-32 (143)
359 PRK05690 molybdopterin biosynt 95.2 0.14 3.1E-06 44.8 9.0 36 150-185 31-66 (245)
360 TIGR03840 TMPT_Se_Te thiopurin 95.2 0.4 8.6E-06 41.1 11.5 103 149-255 33-153 (213)
361 PRK06197 short chain dehydroge 95.2 0.16 3.5E-06 45.9 9.7 40 150-190 15-55 (306)
362 KOG0725 Reductases with broad 95.2 0.11 2.3E-06 46.3 8.2 80 149-232 6-99 (270)
363 PRK08085 gluconate 5-dehydroge 95.2 0.21 4.6E-06 43.6 10.2 80 150-232 8-96 (254)
364 PRK08251 short chain dehydroge 95.2 0.19 4.2E-06 43.6 9.9 78 151-231 2-90 (248)
365 PRK14194 bifunctional 5,10-met 95.2 0.22 4.7E-06 44.8 10.1 94 130-256 138-233 (301)
366 PRK07074 short chain dehydroge 95.2 0.17 3.6E-06 44.3 9.5 79 151-232 2-87 (257)
367 PF02558 ApbA: Ketopantoate re 95.2 0.019 4E-07 46.2 3.1 99 154-258 1-105 (151)
368 PRK08644 thiamine biosynthesis 95.2 0.16 3.6E-06 43.4 9.1 35 150-184 27-61 (212)
369 PRK07417 arogenate dehydrogena 95.1 0.19 4E-06 45.0 9.8 67 153-233 2-68 (279)
370 PLN02244 tocopherol O-methyltr 95.1 0.076 1.6E-06 49.0 7.5 95 149-255 117-224 (340)
371 PRK06114 short chain dehydroge 95.1 0.19 4.1E-06 44.0 9.8 79 150-232 7-96 (254)
372 PRK08223 hypothetical protein; 95.1 0.11 2.4E-06 46.4 8.1 36 150-185 26-61 (287)
373 PRK07574 formate dehydrogenase 95.1 0.26 5.5E-06 46.2 10.9 45 150-195 191-235 (385)
374 PRK08594 enoyl-(acyl carrier p 95.1 0.16 3.4E-06 44.8 9.1 78 150-231 6-96 (257)
375 PRK11036 putative S-adenosyl-L 95.1 0.21 4.5E-06 44.0 9.9 94 149-254 43-149 (255)
376 PRK06940 short chain dehydroge 95.1 0.2 4.3E-06 44.6 9.8 78 151-232 2-86 (275)
377 PRK12826 3-ketoacyl-(acyl-carr 95.1 0.1 2.3E-06 45.2 7.9 80 150-232 5-93 (251)
378 PRK07067 sorbitol dehydrogenas 95.1 0.13 2.8E-06 45.1 8.5 79 150-231 5-89 (257)
379 TIGR03215 ac_ald_DH_ac acetald 95.1 0.23 5E-06 44.4 10.0 87 153-252 3-93 (285)
380 COG2084 MmsB 3-hydroxyisobutyr 95.1 0.32 6.8E-06 43.5 10.8 89 153-257 2-98 (286)
381 PLN02253 xanthoxin dehydrogena 95.0 0.15 3.4E-06 45.2 9.1 79 150-232 17-104 (280)
382 PRK07666 fabG 3-ketoacyl-(acyl 95.0 0.16 3.5E-06 43.9 9.0 82 150-232 6-94 (239)
383 PF08704 GCD14: tRNA methyltra 95.0 0.096 2.1E-06 45.8 7.4 109 142-257 32-149 (247)
384 PRK08226 short chain dehydroge 95.0 0.11 2.4E-06 45.7 8.0 80 150-232 5-92 (263)
385 PF01210 NAD_Gly3P_dh_N: NAD-d 95.0 0.23 5E-06 40.2 9.2 85 153-245 1-91 (157)
386 PLN02657 3,8-divinyl protochlo 95.0 0.2 4.2E-06 47.2 10.0 82 146-232 55-146 (390)
387 PRK07985 oxidoreductase; Provi 95.0 0.48 1E-05 42.6 12.2 80 149-231 47-137 (294)
388 TIGR00872 gnd_rel 6-phosphoglu 95.0 0.28 6E-06 44.4 10.6 43 153-196 2-44 (298)
389 TIGR00446 nop2p NOL1/NOP2/sun 95.0 0.64 1.4E-05 41.2 12.7 102 145-255 66-200 (264)
390 PLN03075 nicotianamine synthas 95.0 0.18 3.9E-06 45.2 9.1 99 149-254 122-233 (296)
391 COG0334 GdhA Glutamate dehydro 95.0 0.29 6.4E-06 45.5 10.7 61 123-186 180-241 (411)
392 PF00070 Pyr_redox: Pyridine n 95.0 0.091 2E-06 37.2 6.0 62 153-230 1-62 (80)
393 cd01492 Aos1_SUMO Ubiquitin ac 95.0 0.16 3.4E-06 43.0 8.4 35 150-184 20-54 (197)
394 PRK09242 tropinone reductase; 95.0 0.23 5E-06 43.5 9.9 79 150-232 8-98 (257)
395 cd05211 NAD_bind_Glu_Leu_Phe_V 95.0 0.42 9.1E-06 41.0 11.0 78 149-233 21-108 (217)
396 PRK07856 short chain dehydroge 95.0 0.17 3.6E-06 44.2 8.9 77 150-231 5-84 (252)
397 PRK06398 aldose dehydrogenase; 95.0 0.03 6.6E-07 49.3 4.2 76 150-232 5-82 (258)
398 PRK08264 short chain dehydroge 95.0 0.18 4E-06 43.4 9.1 75 150-232 5-83 (238)
399 PRK10538 malonic semialdehyde 95.0 0.18 3.8E-06 44.0 9.0 77 153-232 2-84 (248)
400 PLN00016 RNA-binding protein; 95.0 0.24 5.2E-06 46.3 10.4 97 150-255 51-165 (378)
401 PRK06935 2-deoxy-D-gluconate 3 94.9 0.13 2.9E-06 45.1 8.2 79 150-232 14-101 (258)
402 PRK14191 bifunctional 5,10-met 94.9 0.31 6.8E-06 43.4 10.3 93 131-256 137-231 (285)
403 PRK11559 garR tartronate semia 94.9 0.37 8.1E-06 43.4 11.2 43 153-196 4-46 (296)
404 PRK06484 short chain dehydroge 94.9 0.19 4.1E-06 49.1 10.0 105 150-258 268-404 (520)
405 PRK07097 gluconate 5-dehydroge 94.9 0.16 3.4E-06 44.8 8.7 80 150-232 9-97 (265)
406 TIGR00715 precor6x_red precorr 94.9 0.083 1.8E-06 46.5 6.7 73 153-231 2-74 (256)
407 PLN02256 arogenate dehydrogena 94.9 0.48 1E-05 43.0 11.8 97 142-255 27-128 (304)
408 PRK08993 2-deoxy-D-gluconate 3 94.9 0.16 3.5E-06 44.4 8.7 80 150-232 9-95 (253)
409 PF10727 Rossmann-like: Rossma 94.9 0.11 2.4E-06 40.4 6.7 79 151-245 10-90 (127)
410 PRK00121 trmB tRNA (guanine-N( 94.9 0.45 9.8E-06 40.3 11.0 100 150-255 40-157 (202)
411 PRK08303 short chain dehydroge 94.9 0.2 4.3E-06 45.4 9.4 34 150-184 7-41 (305)
412 PRK06720 hypothetical protein; 94.9 0.25 5.5E-06 40.6 9.1 79 150-232 15-103 (169)
413 PRK14618 NAD(P)H-dependent gly 94.9 0.3 6.5E-06 44.8 10.6 95 152-255 5-105 (328)
414 PRK07066 3-hydroxybutyryl-CoA 94.9 0.38 8.3E-06 43.9 11.1 38 152-190 8-45 (321)
415 PLN00141 Tic62-NAD(P)-related 94.9 0.17 3.7E-06 44.3 8.6 100 150-256 16-133 (251)
416 PRK06153 hypothetical protein; 94.9 0.1 2.2E-06 48.3 7.3 35 150-184 175-209 (393)
417 PRK12429 3-hydroxybutyrate deh 94.9 0.23 5E-06 43.3 9.6 79 150-231 3-90 (258)
418 PRK12747 short chain dehydroge 94.9 0.62 1.3E-05 40.6 12.2 38 150-188 3-42 (252)
419 COG4106 Tam Trans-aconitate me 94.8 0.23 4.9E-06 42.1 8.6 97 144-251 24-126 (257)
420 KOG2017 Molybdopterin synthase 94.8 0.052 1.1E-06 48.9 5.1 33 150-182 65-97 (427)
421 PRK05562 precorrin-2 dehydroge 94.8 0.17 3.8E-06 43.4 8.3 92 150-254 24-116 (223)
422 PRK06997 enoyl-(acyl carrier p 94.8 0.25 5.4E-06 43.5 9.7 79 150-232 5-94 (260)
423 PRK08300 acetaldehyde dehydrog 94.8 0.24 5.1E-06 44.6 9.3 93 152-254 5-101 (302)
424 PRK07102 short chain dehydroge 94.8 0.3 6.5E-06 42.3 9.9 76 152-232 2-86 (243)
425 PLN03139 formate dehydrogenase 94.8 0.34 7.5E-06 45.3 10.7 45 150-195 198-242 (386)
426 TIGR00417 speE spermidine synt 94.8 0.34 7.5E-06 43.1 10.4 99 149-254 71-186 (270)
427 PRK10669 putative cation:proto 94.8 0.24 5.1E-06 49.0 10.2 75 152-233 418-492 (558)
428 PRK06113 7-alpha-hydroxysteroi 94.8 0.26 5.7E-06 43.1 9.6 80 150-232 10-98 (255)
429 PRK14982 acyl-ACP reductase; P 94.7 0.2 4.3E-06 46.0 8.9 95 149-258 153-250 (340)
430 PF01408 GFO_IDH_MocA: Oxidore 94.7 0.77 1.7E-05 34.9 11.2 89 153-256 2-94 (120)
431 PRK12936 3-ketoacyl-(acyl-carr 94.7 0.19 4.2E-06 43.4 8.6 80 150-232 5-90 (245)
432 PRK06522 2-dehydropantoate 2-r 94.7 0.2 4.3E-06 45.2 9.0 96 153-255 2-101 (304)
433 PRK10792 bifunctional 5,10-met 94.7 0.29 6.2E-06 43.7 9.5 93 131-256 139-233 (285)
434 PRK07775 short chain dehydroge 94.7 0.27 5.9E-06 43.6 9.7 79 150-232 9-97 (274)
435 PLN02589 caffeoyl-CoA O-methyl 94.7 0.31 6.7E-06 42.7 9.7 105 144-253 73-189 (247)
436 PRK05650 short chain dehydroge 94.7 0.19 4.2E-06 44.4 8.6 77 153-232 2-87 (270)
437 PRK13243 glyoxylate reductase; 94.7 0.31 6.8E-06 44.8 10.2 37 150-187 149-185 (333)
438 PF07021 MetW: Methionine bios 94.7 0.4 8.7E-06 40.0 9.7 72 147-228 10-81 (193)
439 PTZ00098 phosphoethanolamine N 94.7 0.18 3.9E-06 44.7 8.3 105 142-256 44-158 (263)
440 PRK07411 hypothetical protein; 94.6 0.11 2.4E-06 48.8 7.2 36 150-185 37-72 (390)
441 PRK07424 bifunctional sterol d 94.6 0.2 4.4E-06 47.3 8.9 74 150-232 177-255 (406)
442 PRK08278 short chain dehydroge 94.6 0.14 3E-06 45.5 7.5 36 150-186 5-41 (273)
443 PRK08287 cobalt-precorrin-6Y C 94.6 1.1 2.3E-05 37.4 12.5 99 143-254 24-131 (187)
444 PRK01438 murD UDP-N-acetylmura 94.6 0.23 5.1E-06 48.0 9.6 70 149-232 14-88 (480)
445 TIGR00452 methyltransferase, p 94.6 0.18 3.9E-06 45.8 8.1 100 141-253 112-224 (314)
446 TIGR02752 MenG_heptapren 2-hep 94.5 0.21 4.5E-06 43.1 8.3 102 144-256 39-153 (231)
447 PF01113 DapB_N: Dihydrodipico 94.5 0.4 8.7E-06 37.2 9.1 92 153-257 2-100 (124)
448 PF05368 NmrA: NmrA-like famil 94.5 0.3 6.5E-06 42.2 9.3 69 154-231 1-73 (233)
449 TIGR01963 PHB_DH 3-hydroxybuty 94.5 0.29 6.3E-06 42.6 9.3 78 152-232 2-88 (255)
450 PRK03562 glutathione-regulated 94.4 0.3 6.4E-06 48.9 10.1 78 151-235 400-477 (621)
451 KOG1014 17 beta-hydroxysteroid 94.4 0.32 6.9E-06 43.5 9.1 79 149-232 47-136 (312)
452 TIGR02622 CDP_4_6_dhtase CDP-g 94.4 0.17 3.6E-06 46.8 7.9 75 150-231 3-84 (349)
453 PRK06077 fabG 3-ketoacyl-(acyl 94.4 0.68 1.5E-05 40.2 11.4 105 150-258 5-144 (252)
454 PRK10258 biotin biosynthesis p 94.4 1.9 4.2E-05 37.6 14.2 100 144-256 36-142 (251)
455 PRK08293 3-hydroxybutyryl-CoA 94.3 0.62 1.3E-05 41.8 11.1 39 152-191 4-42 (287)
456 PRK15461 NADH-dependent gamma- 94.3 0.61 1.3E-05 42.1 11.1 43 153-196 3-45 (296)
457 PF02719 Polysacc_synt_2: Poly 94.3 0.22 4.8E-06 44.5 8.0 73 154-232 1-87 (293)
458 PRK07791 short chain dehydroge 94.3 0.41 8.8E-06 42.9 9.9 36 149-185 4-40 (286)
459 PRK05708 2-dehydropantoate 2-r 94.3 0.25 5.3E-06 44.9 8.5 98 153-257 4-107 (305)
460 PRK06523 short chain dehydroge 94.3 0.27 5.8E-06 43.1 8.6 37 150-187 8-45 (260)
461 PRK05600 thiamine biosynthesis 94.3 0.45 9.8E-06 44.3 10.3 35 150-184 40-74 (370)
462 PRK15469 ghrA bifunctional gly 94.3 0.42 9.2E-06 43.5 9.9 36 150-186 135-170 (312)
463 PRK07370 enoyl-(acyl carrier p 94.3 0.35 7.6E-06 42.5 9.2 104 150-258 5-151 (258)
464 PRK09599 6-phosphogluconate de 94.2 0.46 1E-05 42.9 10.2 43 153-196 2-44 (301)
465 PRK05597 molybdopterin biosynt 94.2 0.4 8.7E-06 44.5 9.9 36 150-185 27-62 (355)
466 PLN02520 bifunctional 3-dehydr 94.2 0.19 4.2E-06 49.2 8.1 45 150-195 378-423 (529)
467 PRK08063 enoyl-(acyl carrier p 94.2 0.25 5.4E-06 42.9 8.1 79 150-232 3-92 (250)
468 PRK06463 fabG 3-ketoacyl-(acyl 94.2 0.4 8.6E-06 41.9 9.4 80 150-232 6-89 (255)
469 COG1648 CysG Siroheme synthase 94.1 0.86 1.9E-05 38.9 10.9 118 150-281 11-130 (210)
470 PRK12746 short chain dehydroge 94.1 0.4 8.6E-06 41.8 9.3 80 150-232 5-100 (254)
471 PRK11064 wecC UDP-N-acetyl-D-m 94.1 0.9 1.9E-05 43.1 12.2 74 152-233 4-86 (415)
472 PRK07792 fabG 3-ketoacyl-(acyl 94.1 0.53 1.2E-05 42.6 10.3 79 150-232 11-99 (306)
473 KOG1201 Hydroxysteroid 17-beta 94.1 0.31 6.8E-06 43.3 8.3 80 148-232 35-124 (300)
474 PRK05565 fabG 3-ketoacyl-(acyl 94.1 0.27 5.8E-06 42.5 8.1 79 151-232 5-93 (247)
475 PRK04266 fibrillarin; Provisio 94.1 0.97 2.1E-05 39.0 11.3 102 144-253 66-175 (226)
476 PRK08219 short chain dehydroge 94.1 0.44 9.5E-06 40.6 9.3 75 152-232 4-81 (227)
477 PRK03659 glutathione-regulated 94.1 0.38 8.2E-06 48.0 10.0 94 152-253 401-497 (601)
478 PRK12743 oxidoreductase; Provi 94.0 0.31 6.7E-06 42.7 8.5 78 151-232 2-90 (256)
479 PRK07878 molybdopterin biosynt 94.0 0.21 4.5E-06 47.0 7.7 36 150-185 41-76 (392)
480 PF02737 3HCDH_N: 3-hydroxyacy 94.0 0.17 3.7E-06 42.1 6.4 38 153-191 1-38 (180)
481 TIGR00563 rsmB ribosomal RNA s 94.0 0.68 1.5E-05 44.1 11.2 104 144-256 232-370 (426)
482 PRK12335 tellurite resistance 94.0 0.11 2.5E-06 46.6 5.6 92 149-254 119-223 (287)
483 PRK08416 7-alpha-hydroxysteroi 94.0 0.59 1.3E-05 41.0 10.1 78 150-231 7-96 (260)
484 PRK14188 bifunctional 5,10-met 94.0 0.62 1.4E-05 41.9 10.2 93 131-257 138-233 (296)
485 PRK12937 short chain dehydroge 93.9 0.4 8.7E-06 41.4 9.0 35 150-185 4-39 (245)
486 PRK14189 bifunctional 5,10-met 93.9 0.55 1.2E-05 41.9 9.7 84 142-257 148-233 (285)
487 PRK12490 6-phosphogluconate de 93.9 1 2.3E-05 40.6 11.8 43 153-196 2-44 (299)
488 PRK12749 quinate/shikimate deh 93.9 0.23 5E-06 44.6 7.4 37 150-186 123-159 (288)
489 PRK14106 murD UDP-N-acetylmura 93.9 0.32 6.9E-06 46.6 8.9 70 150-232 4-78 (450)
490 PRK00216 ubiE ubiquinone/menaq 93.9 0.36 7.8E-06 41.6 8.5 106 144-257 45-161 (239)
491 cd05212 NAD_bind_m-THF_DH_Cycl 93.9 0.89 1.9E-05 36.1 9.9 84 142-257 18-103 (140)
492 PRK09310 aroDE bifunctional 3- 93.9 0.39 8.4E-06 46.4 9.4 70 150-233 331-401 (477)
493 PRK02472 murD UDP-N-acetylmura 93.9 0.41 8.8E-06 45.8 9.6 71 150-232 4-78 (447)
494 PRK08655 prephenate dehydrogen 93.8 0.62 1.3E-05 44.5 10.6 43 153-196 2-46 (437)
495 PRK14903 16S rRNA methyltransf 93.8 1.1 2.4E-05 42.8 12.2 103 144-256 231-368 (431)
496 PF07991 IlvN: Acetohydroxy ac 93.8 1.2 2.6E-05 36.1 10.5 81 150-246 3-88 (165)
497 cd05313 NAD_bind_2_Glu_DH NAD( 93.8 1.4 2.9E-05 38.8 11.7 34 149-183 36-69 (254)
498 PRK06701 short chain dehydroge 93.8 0.35 7.6E-06 43.4 8.4 38 147-185 42-80 (290)
499 KOG1610 Corticosteroid 11-beta 93.8 0.69 1.5E-05 41.5 9.8 107 149-258 27-168 (322)
500 COG3288 PntA NAD/NADP transhyd 93.7 0.43 9.3E-06 42.6 8.4 132 146-279 159-308 (356)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.7e-56 Score=388.18 Aligned_cols=322 Identities=39% Similarity=0.677 Sum_probs=304.7
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~ 83 (335)
.|++.+.|.+|.+ +|.++| ||. +|+|++||+.|+.+|+||+|+..+...|++|.+|++|.+|+|...+.+. -|.++
T Consensus 42 TD~~~~~G~~p~~-~P~vLG-HEg-AGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~ 118 (366)
T COG1062 42 TDAHTLSGDDPEG-FPAVLG-HEG-AGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP 118 (366)
T ss_pred cchhhhcCCCCCC-Cceecc-ccc-ccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhccccccc
Confidence 4788899999987 999999 999 9999999999999999999999999999999999999999999766543 57889
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
+|++|++.++...+|+.|+++|++|..+++..+.+++++.+++.++++.|...|.+.+..+.++++++++|.|.|.|++|
T Consensus 119 dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVG 198 (366)
T COG1062 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVG 198 (366)
T ss_pred CCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
++++|-|+..|++++++++.+++|++++++||+++.+|.++ . +..+.++++|++ |+|.+|||+|+...+++++.+
T Consensus 199 laaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~ 274 (366)
T COG1062 199 LAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE---VDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEA 274 (366)
T ss_pred HHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh---hhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987 5 699999999998 999999999999999999999
Q ss_pred hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
..+. |+.+.+|.... ...+.+...+. .+.+++|+.+|....+.+++.++++..+|++++.+++++.++|+||+|||+
T Consensus 275 ~~~~-G~~v~iGv~~~~~~i~~~~~~lv-~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~ 352 (366)
T COG1062 275 THRG-GTSVIIGVAGAGQEISTRPFQLV-TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFD 352 (366)
T ss_pred HhcC-CeEEEEecCCCCceeecChHHee-ccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHH
Confidence 9996 99999998776 67778888888 559999999999888899999999999999999999999999999999999
Q ss_pred HhcCCCeeeEEEeC
Q 019822 322 LLKQPDCVKVLITI 335 (335)
Q Consensus 322 ~~~~~~~~k~vi~~ 335 (335)
.|.+++.+|.||.+
T Consensus 353 ~m~~G~~IR~Vi~~ 366 (366)
T COG1062 353 LMHEGKSIRSVIRF 366 (366)
T ss_pred HHhCCceeeEEecC
Confidence 99999999998875
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.5e-56 Score=396.76 Aligned_cols=292 Identities=29% Similarity=0.428 Sum_probs=269.5
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEe-cccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIP-TYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
.|+|.++|.++...+|+|+| ||. +|+|+++|++|++||+||||.+ ++..+|+.|++|++|++|+|++... .|++.
T Consensus 43 sDlH~~~G~~~~~~~P~ipG-HEi-vG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~--~gy~~ 118 (339)
T COG1064 43 TDLHVAKGDWPVPKLPLIPG-HEI-VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI--TGYTT 118 (339)
T ss_pred hhhhhhcCCCCCCCCCccCC-cce-EEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccc--cceee
Confidence 59999999999988999999 999 9999999999999999999998 8999999999999999999999777 48888
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
+| +|+||+.||+.+++++|+++++++||.+.|+..|+|++| +.++++|+++|+|+|.|++|
T Consensus 119 ~G------------------Gyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlG 179 (339)
T COG1064 119 DG------------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLG 179 (339)
T ss_pred cC------------------cceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHH
Confidence 77 999999999999999999999999999999999999998 55999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
.+++|+|+++|+ +|++++++++|++.++++|++++++.++ .++.+.+++. +|+++|+++ +..++..++.|
T Consensus 180 h~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~~-----~d~ii~tv~-~~~~~~~l~~l 249 (339)
T COG1064 180 HMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKEI-----ADAIIDTVG-PATLEPSLKAL 249 (339)
T ss_pred HHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHhh-----CcEEEECCC-hhhHHHHHHHH
Confidence 999999999998 9999999999999999999999999776 6777777653 999999999 77999999999
Q ss_pred ccCCeEEEEEccCC-CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 244 KVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 244 ~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
+++ |+++++|... ....+++.+.++.+++++.|+..++ +.++++++++..++++++. +.+.++++|+++|++.
T Consensus 250 ~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~ 323 (339)
T COG1064 250 RRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYER 323 (339)
T ss_pred hcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHH
Confidence 998 9999999984 4456688888888999999999886 6899999999999998776 4479999999999999
Q ss_pred hcCCCee-eEEEeC
Q 019822 323 LKQPDCV-KVLITI 335 (335)
Q Consensus 323 ~~~~~~~-k~vi~~ 335 (335)
|.+++.. |.||++
T Consensus 324 m~~g~v~gR~Vi~~ 337 (339)
T COG1064 324 MEKGKVRGRAVIDM 337 (339)
T ss_pred HHcCCeeeEEEecC
Confidence 9999875 888864
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.4e-53 Score=363.05 Aligned_cols=326 Identities=44% Similarity=0.760 Sum_probs=305.4
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc--cccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL--NGLM 82 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~--~g~~ 82 (335)
.|.+.|.|..|...||.|+| ||. +|+|+.+|+.|..+++||+|+..+...|+.|.+|+++..|+|.+.+.+. .++.
T Consensus 47 TD~~~~~g~~~~~~fP~IlG-HEa-aGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~ 124 (375)
T KOG0022|consen 47 TDAYVWSGKDPEGLFPVILG-HEA-AGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMP 124 (375)
T ss_pred ccceeecCCCccccCceEec-ccc-eeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccc
Confidence 48899999998889999999 999 9999999999999999999999999999999999999999999988764 3344
Q ss_pred cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822 83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV 162 (335)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v 162 (335)
.+|.+|++-+|...+|+.|..+|+||.+|+...+.++++..+++.++++.|.++|+|.|.++.+++++|+++.|.|.|++
T Consensus 125 ~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~V 204 (375)
T KOG0022|consen 125 YDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGV 204 (375)
T ss_pred cCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|+++++-||+.|+++++++|.+++|.+.++++|+++.+|+.+ ......+.++++|++ |+|+-|||+|+..++++++.+
T Consensus 205 GLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d-~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s 282 (375)
T KOG0022|consen 205 GLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD-LKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALES 282 (375)
T ss_pred HHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh-ccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999885 223578889999998 999999999999999999999
Q ss_pred hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
...++|.-+.+|.... ...++.++.+. ++.++.|+.+|.+..+.+++.+.+...++++++..+++|++||+++++||+
T Consensus 283 ~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ 361 (375)
T KOG0022|consen 283 CHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFD 361 (375)
T ss_pred hhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHH
Confidence 9998899999998776 77788888887 799999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCeeeEEEeC
Q 019822 322 LLKQPDCVKVLITI 335 (335)
Q Consensus 322 ~~~~~~~~k~vi~~ 335 (335)
.|.+++.+|-|+.+
T Consensus 362 ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 362 LLHEGKSIRCVLWM 375 (375)
T ss_pred HHhCCceEEEEEeC
Confidence 99999999988864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-50 Score=348.95 Aligned_cols=302 Identities=26% Similarity=0.424 Sum_probs=263.9
Q ss_pred EEEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822 5 VTLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81 (335)
Q Consensus 5 ~d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~ 81 (335)
.|+|.|...... ...|.++| ||. +|+|.++|++|+++|+||||++.|..+|+.|+.|+.|.+|+|.+..+.+.+
T Consensus 44 SDvHy~~~G~ig~~v~k~PmvlG-HEs-sGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atp- 120 (354)
T KOG0024|consen 44 SDVHYYTHGRIGDFVVKKPMVLG-HES-SGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATP- 120 (354)
T ss_pred ccchhhccCCcCccccccccccc-ccc-ccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCC-
Confidence 477877665543 25899999 999 999999999999999999999999999999999999999999998774222
Q ss_pred ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822 82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT 161 (335)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~ 161 (335)
-.+ |++++|++++++.+++||+++|++++|++. +++++|||. +++++++|++|||+|+|+
T Consensus 121 p~~------------------G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGP 180 (354)
T KOG0024|consen 121 PVD------------------GTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGP 180 (354)
T ss_pred CcC------------------CceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcH
Confidence 123 389999999999999999999999999988 799999987 789999999999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC-chhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~-~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
+|+++...||++|+.+|++++-+++|++.++++|++.+.+..... +..+.+.++...+...+|+.|||+|....++.++
T Consensus 181 IGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai 260 (354)
T KOG0024|consen 181 IGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAI 260 (354)
T ss_pred HHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHH
Confidence 999999999999999999999999999999999999876654311 2334555556666567999999999988999999
Q ss_pred HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
.+++.+ |++++++... ...+++..++..+++.+.|+.- ....+++.+++++++|++++++++|+.|+++++.|||
T Consensus 261 ~a~r~g-Gt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~fr---y~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf 335 (354)
T KOG0024|consen 261 KATRSG-GTVVLVGMGA-EEIQFPIIDVALKEVDLRGSFR---YCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAF 335 (354)
T ss_pred HHhccC-CEEEEeccCC-CccccChhhhhhheeeeeeeee---eccccHHHHHHHHHcCCcCchhheecccccchHHHHH
Confidence 999998 9999998866 5788999999899999999862 2345899999999999999999999999999999999
Q ss_pred HHhcCCC--eeeEEEe
Q 019822 321 QLLKQPD--CVKVLIT 334 (335)
Q Consensus 321 ~~~~~~~--~~k~vi~ 334 (335)
+.+..++ .+|+++.
T Consensus 336 ~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 336 ETLQHGEEGVIKVIIT 351 (354)
T ss_pred HHHHhCcCCceEEEEe
Confidence 9988776 4599886
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-48 Score=334.33 Aligned_cols=300 Identities=26% Similarity=0.398 Sum_probs=264.9
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEE-ecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVI-PTYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
.|+|.|.|..+...+|+|+| ||. +|+|+++|++|++|++||+|- -....+|..|++|..+.++.|.+.-..-+|+..
T Consensus 51 sDlH~~~gdwg~s~~PlV~G-HEi-aG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~ 128 (360)
T KOG0023|consen 51 SDLHAWKGDWGLSKYPLVPG-HEI-AGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYH 128 (360)
T ss_pred hhHHHhhccCCcccCCccCC-cee-eEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEecccccc
Confidence 58999999999988999999 999 999999999999999999995 555789999999999999999976555467777
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
+| ...||+||+|+++++.+++++|++++.+.||.+.|+..|+|.+| ++.++.||+++-|.|+|++|
T Consensus 129 DG-------------t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLG 194 (360)
T KOG0023|consen 129 DG-------------TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLG 194 (360)
T ss_pred CC-------------CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccc
Confidence 76 34567899999999999999999999999999999999999988 67889999999999997799
Q ss_pred HHHHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceEeCCC-CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 164 LGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPD-DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lga~~v~~~~-~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
.+++|+||++|. +|++++++. .|.+.++.|||+.-++.. + +++.+.+.+.+++ ++|-|.+. ....++.+++
T Consensus 195 h~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d---~d~~~~~~~~~dg-~~~~v~~~--a~~~~~~~~~ 267 (360)
T KOG0023|consen 195 HMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTED---PDIMKAIMKTTDG-GIDTVSNL--AEHALEPLLG 267 (360)
T ss_pred hHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCC---HHHHHHHHHhhcC-cceeeeec--cccchHHHHH
Confidence 999999999999 999999988 455556889999877766 5 8888888888776 66666655 4446899999
Q ss_pred hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+++.+ |++|++|.+.. ...++.+++..+.+.+.|+.+|+ +.+.++++++..++.++.. .+..+++++++||+
T Consensus 268 ~lk~~-Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~e 339 (360)
T KOG0023|consen 268 LLKVN-GTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYE 339 (360)
T ss_pred HhhcC-CEEEEEeCcCC-cccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHH
Confidence 99998 99999999985 88899999999999999999987 6889999999999998775 47899999999999
Q ss_pred HhcCCCee-eEEEeC
Q 019822 322 LLKQPDCV-KVLITI 335 (335)
Q Consensus 322 ~~~~~~~~-k~vi~~ 335 (335)
.|.+++.. |.|+++
T Consensus 340 rm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 340 RMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHhcCeeEEEEEEc
Confidence 99999875 888864
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.6e-46 Score=349.93 Aligned_cols=321 Identities=31% Similarity=0.511 Sum_probs=270.2
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~ 83 (335)
.|++.+.|.++. .+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|+.|.++.|.+..... .|...
T Consensus 48 ~D~~~~~g~~~~-~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~ 124 (371)
T cd08281 48 SDLSVINGDRPR-PLPMALG-HEA-AGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLL 124 (371)
T ss_pred cchHhhcCCCCC-CCCccCC-ccc-eeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccc
Confidence 467777777653 4689999 999 9999999999999999999999888899999999999999998764321 23223
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
+|..++..++..+.+..+.|+|+||+.++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+|++|
T Consensus 125 ~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG 204 (371)
T cd08281 125 SGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVG 204 (371)
T ss_pred cCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence 33223332222222222346899999999999999999999999999998999999998888899999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++|+|+.+|+++|+++++++++++.++++|+++++++++ .++.+.+++++++ ++|++|||+|....+..+++++
T Consensus 205 ~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l 280 (371)
T cd08281 205 LSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD---PNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEIT 280 (371)
T ss_pred HHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHH
Confidence 99999999999967999999999999999999999999887 7788888888877 8999999999877889999999
Q ss_pred ccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 244 KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
+++ |+++.+|.... ...+++...++.+++++.|+..+++...++++.+++++.++++++.++++++|+|+|+++||+.
T Consensus 281 ~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~ 359 (371)
T cd08281 281 RRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDR 359 (371)
T ss_pred hcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHH
Confidence 997 99999997653 3456777778889999999876654445678899999999999988889999999999999999
Q ss_pred hcCCCeeeEEE
Q 019822 323 LKQPDCVKVLI 333 (335)
Q Consensus 323 ~~~~~~~k~vi 333 (335)
+.+++..|.||
T Consensus 360 ~~~~~~~~~vi 370 (371)
T cd08281 360 LAAGEAVRQVI 370 (371)
T ss_pred HhCCCceeeee
Confidence 99988775544
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=4.5e-46 Score=346.40 Aligned_cols=325 Identities=40% Similarity=0.705 Sum_probs=263.6
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~ 84 (335)
|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|+.|.++.|.+..... +|+..+
T Consensus 42 D~~~~~g~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~ 119 (368)
T TIGR02818 42 DAFTLSGADPEGVFPVILG-HEG-AGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPD 119 (368)
T ss_pred HHHHhcCCCCCCCCCeeec-ccc-EEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccC
Confidence 5566677766556799999 999 9999999999999999999999999999999999999999998743210 233222
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
|..++..+|...++..+.|+|+||+.+|++.++++|+++++++++++++++.|||+++.++++++++++|||+|+|++|+
T Consensus 120 ~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~ 199 (368)
T TIGR02818 120 GTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGL 199 (368)
T ss_pred CccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHH
Confidence 22122222322233334569999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++|+|+.+|+.+|+++++++++++.++++|+++++++++ ...++.+.+++++++ ++|++|||+|++..+..++++++
T Consensus 200 ~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~ 277 (368)
T TIGR02818 200 SVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCH 277 (368)
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhh
Confidence 9999999999867999999999999999999999998763 114466778888877 89999999998778899999997
Q ss_pred cCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 245 VGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 245 ~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
+++|+++.+|.... ...++....+. ++..+.++..+......++.++++++.+++++++++++++|+|+|+++||+.+
T Consensus 278 ~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~ 356 (368)
T TIGR02818 278 KGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLM 356 (368)
T ss_pred cCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHH
Confidence 72289999997643 33444455554 34557777654433345789999999999998888899999999999999999
Q ss_pred cCCCeeeEEEeC
Q 019822 324 KQPDCVKVLITI 335 (335)
Q Consensus 324 ~~~~~~k~vi~~ 335 (335)
.+++..|+++.+
T Consensus 357 ~~~~~~k~~v~~ 368 (368)
T TIGR02818 357 HEGKSIRTVIHY 368 (368)
T ss_pred hCCCceeEEeeC
Confidence 887777999875
No 8
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.7e-45 Score=342.77 Aligned_cols=325 Identities=41% Similarity=0.716 Sum_probs=268.0
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~ 83 (335)
.|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+..+|+.|++|++|.++.|.+..... .|...
T Consensus 42 ~D~~~~~g~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~ 119 (368)
T cd08300 42 TDAYTLSGADPEGLFPVILG-HEG-AGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMP 119 (368)
T ss_pred hhHHHhcCCCccCCCCceec-cce-eEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccC
Confidence 46666677776556899999 999 9999999999999999999999999999999999999999998753210 23333
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
+|..++..+|...++..+.|+|+||+.++++.++++|+++++++++++++++.|||+++++...++++++|||+|+|++|
T Consensus 120 ~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG 199 (368)
T cd08300 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVG 199 (368)
T ss_pred CCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHH
Confidence 33333333444444444557999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++|+|+.+|+.+|+++++++++++.++++|+++++++++ .+.++.+.+++++++ ++|+|||++|++..+..+++++
T Consensus 200 ~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l 277 (368)
T cd08300 200 LAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEAC 277 (368)
T ss_pred HHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhh
Confidence 99999999999967999999999999999999999998875 112577888888887 9999999999876889999999
Q ss_pred ccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 244 KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
++++|+++.+|.... ....++...+. ++..+.++..+.+....++.++++++.++++++.++++++|+|+|+++||+.
T Consensus 278 ~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~ 356 (368)
T cd08300 278 HKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDL 356 (368)
T ss_pred ccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHH
Confidence 773389999997642 23444444444 4456777766655556788999999999999988889999999999999999
Q ss_pred hcCCCeeeEEEe
Q 019822 323 LKQPDCVKVLIT 334 (335)
Q Consensus 323 ~~~~~~~k~vi~ 334 (335)
+.+++..|++++
T Consensus 357 ~~~~~~~k~~~~ 368 (368)
T cd08300 357 MHAGKSIRTVVK 368 (368)
T ss_pred HhCCCCceeeeC
Confidence 988877798874
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=8.1e-45 Score=336.97 Aligned_cols=316 Identities=27% Similarity=0.496 Sum_probs=262.8
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++. .+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|.+|++|.++.|.+..........
T Consensus 42 D~~~~~g~~~~-~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-- 116 (358)
T TIGR03451 42 DLHYREGGIND-EFPFLLG-HEA-AGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-- 116 (358)
T ss_pred HHHHhcCCccc-cCCcccc-cce-EEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc--
Confidence 44555565442 4789999 999 999999999999999999999999999999999999999999853211000000
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
.+|.......+.|+|+||+.+++..++++|+++++++++++++.+.++|+++.+...+.++++|||+|+|++|++
T Consensus 117 -----~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~ 191 (358)
T TIGR03451 117 -----TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDA 191 (358)
T ss_pred -----ccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence 001000000123589999999999999999999999999999999999988878888999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++|+|+.+|+++|++++++++++++++++|+++++++++ .++.+.+++.+++.++|++|||+|++..++.+++++++
T Consensus 192 a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~ 268 (358)
T TIGR03451 192 AIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDL 268 (358)
T ss_pred HHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcc
Confidence 999999999956999999999999999999999999876 67888888888887999999999987688999999999
Q ss_pred CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 246 GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 246 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
+ |+++.+|.... ...++++..++.+++++.++..+.....++++.++++++++++++.++++++||++|+++||+.+.
T Consensus 269 ~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~ 347 (358)
T TIGR03451 269 A-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMH 347 (358)
T ss_pred C-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHh
Confidence 8 99999998654 235677777777899999876543333567889999999999998888999999999999999998
Q ss_pred CCCeeeEEEeC
Q 019822 325 QPDCVKVLITI 335 (335)
Q Consensus 325 ~~~~~k~vi~~ 335 (335)
+++..|+++.+
T Consensus 348 ~~~~~k~~~~~ 358 (358)
T TIGR03451 348 AGDVLRSVVEL 358 (358)
T ss_pred CCCcceeEEeC
Confidence 88878888763
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=7e-45 Score=339.91 Aligned_cols=324 Identities=42% Similarity=0.777 Sum_probs=262.8
Q ss_pred EEEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-
Q 019822 5 VTLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM- 82 (335)
Q Consensus 5 ~d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~- 82 (335)
.|++.+.|.++. ..+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|.+|.++.|.+.... ++.
T Consensus 50 sD~~~~~g~~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~--~~~~ 125 (381)
T PLN02740 50 TDLSAWKGENEAQRAYPRILG-HEA-AGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVD--PFKS 125 (381)
T ss_pred hhHHHhCCCCcccCCCCcccc-ccc-eEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCcccc--cccc
Confidence 366667776643 35789999 999 999999999999999999999999999999999999999999986542 110
Q ss_pred ---cCCCcccccc--CceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822 83 ---LDSTSRMSVR--GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL 157 (335)
Q Consensus 83 ---~~g~~~~~~~--~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~ 157 (335)
.+|..+.... +...++....|+|+||+.+|++.++++|+++++++++++++++.|||+++++.++++++++|||+
T Consensus 126 ~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~ 205 (381)
T PLN02740 126 VMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIF 205 (381)
T ss_pred ccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEE
Confidence 0110000000 00011111236999999999999999999999999999999999999988888999999999999
Q ss_pred cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822 158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 237 (335)
Q Consensus 158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~ 237 (335)
|+|++|++++|+|+.+|+++|+++++++++++.++++|+++++++++ ...++.+.+++++++ ++|++||++|.+..+.
T Consensus 206 G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~ 283 (381)
T PLN02740 206 GLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGG-GVDYSFECAGNVEVLR 283 (381)
T ss_pred CCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCChHHHH
Confidence 99999999999999999866999999999999999999999998765 112477788888877 8999999999877889
Q ss_pred HHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822 238 EALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316 (335)
Q Consensus 238 ~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~ 316 (335)
.+++++++++|+++.+|.... ...+++...+. +++++.|+..+++....++..+++++.++.+++.++++++|+|+|+
T Consensus 284 ~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~ 362 (381)
T PLN02740 284 EAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKI 362 (381)
T ss_pred HHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHH
Confidence 999999872289999997653 22344444344 7889999887665444578899999999999888889999999999
Q ss_pred HHHHHHhcCCCeeeEEEeC
Q 019822 317 DKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 317 ~ea~~~~~~~~~~k~vi~~ 335 (335)
++|++.+.+++..|++|.+
T Consensus 363 ~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 363 NEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred HHHHHHHHCCCceeEEEeC
Confidence 9999999888888999874
No 11
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.5e-44 Score=332.92 Aligned_cols=298 Identities=27% Similarity=0.417 Sum_probs=255.6
Q ss_pred EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++. ..+|.++| ||+ +|+|+++|++|+.|++||+|++.+...|+.|++|+.|+++.|.+.... +|...+
T Consensus 40 D~~~~~~~~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~g~~~~ 116 (339)
T cd08239 40 DLHYYYHGHRAPAYQGVIPG-HEP-AGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAA-YGWNRD 116 (339)
T ss_pred cHHHHcCCCCccCCCCceec-cCc-eEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccc-cccCCC
Confidence 45555555432 23588999 999 999999999999999999999999999999999999999999876542 354444
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
| +|+||+.+|++.++++|+++++++++++++++.|||+++ +.+++.++++|||+|+|++|+
T Consensus 117 G------------------~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~ 177 (339)
T cd08239 117 G------------------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGL 177 (339)
T ss_pred C------------------cceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHH
Confidence 4 999999999999999999999999999999999999987 567889999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++|+|+.+|+++|+++++++++++.++++|+++++++++ .+ .+.++++++++++|++|||+|+...+..++++++
T Consensus 178 ~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 253 (339)
T cd08239 178 GALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVR 253 (339)
T ss_pred HHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhh
Confidence 9999999999944999999999999999999999999876 55 6677777777799999999999867788999999
Q ss_pred cCCeEEEEEccCCCccccch-hHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 245 VGKGKVIVIGVGVDAMVPLN-VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
++ |+++.+|..... .+. ...++.+++++.++...+ .+++..+++++.++++++.++++++|+|+++++||+.+
T Consensus 254 ~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~ 327 (339)
T cd08239 254 PW-GRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALF 327 (339)
T ss_pred cC-CEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHH
Confidence 98 999999976532 233 235667899999987543 46789999999999999888999999999999999999
Q ss_pred cCCCeeeEEEeC
Q 019822 324 KQPDCVKVLITI 335 (335)
Q Consensus 324 ~~~~~~k~vi~~ 335 (335)
.+++..|+++++
T Consensus 328 ~~~~~gKvvi~~ 339 (339)
T cd08239 328 AQGESGKVVFVF 339 (339)
T ss_pred HcCCceEEEEeC
Confidence 887767999874
No 12
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=3.1e-44 Score=334.43 Aligned_cols=324 Identities=42% Similarity=0.778 Sum_probs=268.0
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc-ccccc-
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLM- 82 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~-~~g~~- 82 (335)
.|++.++|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|.+|.+|.++.|.+.... ..|..
T Consensus 42 ~D~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~ 119 (369)
T cd08301 42 TDVYFWEAKGQTPLFPRILG-HEA-AGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMI 119 (369)
T ss_pred hhHHHhcCCCCCCCCCcccc-ccc-ceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCccccccccccc
Confidence 46666777776667899999 999 999999999999999999999999999999999999999999975331 11222
Q ss_pred cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822 83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV 162 (335)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v 162 (335)
.++..++...|...++..+.|+|+||+.+++..++++|+++++++++++++.+.|+|+++++..++.++++|||+|+|++
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~v 199 (369)
T cd08301 120 NDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAV 199 (369)
T ss_pred CCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHH
Confidence 11222222333333333344689999999999999999999999999999999999999888889999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|++++|+|+.+|+++|+++++++++.+.++++|++.++++++ ....+.+.+++++++ ++|++||++|....+..++++
T Consensus 200 G~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~ 277 (369)
T cd08301 200 GLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD-HDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFEC 277 (369)
T ss_pred HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc-cchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHH
Confidence 999999999999867999999999999999999999888764 113466778888777 899999999987678899999
Q ss_pred hcc-CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 243 TKV-GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 243 l~~-~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
+++ + |+++.+|.... ...+++...++ +++++.|+..+++..+.+++.+++++.++++++.++++++|||+|+++||
T Consensus 278 ~~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~ 355 (369)
T cd08301 278 VHDGW-GVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAF 355 (369)
T ss_pred hhcCC-CEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHH
Confidence 998 4 89999998754 34455554554 78999998776655456788999999999998888889999999999999
Q ss_pred HHhcCCCeeeEEEe
Q 019822 321 QLLKQPDCVKVLIT 334 (335)
Q Consensus 321 ~~~~~~~~~k~vi~ 334 (335)
+.+.+++..|+++.
T Consensus 356 ~~~~~~~~~k~~~~ 369 (369)
T cd08301 356 DLLLKGECLRCILH 369 (369)
T ss_pred HHHHCCCceeEEeC
Confidence 99999888898873
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3.7e-44 Score=333.33 Aligned_cols=323 Identities=48% Similarity=0.852 Sum_probs=264.4
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++ ..+|.++| ||+ +|+|+++|++++++++||+|+..+...|+.|.+|..|.++.|++..+...|...++
T Consensus 43 D~~~~~g~~~-~~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~ 119 (365)
T cd08277 43 DILAIEGFKA-TLFPVILG-HEG-AGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDG 119 (365)
T ss_pred hHHHhcCCCC-CCCCeecc-cce-eEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCC
Confidence 5555666655 45789999 999 99999999999999999999999999999999999999999998665333443332
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
.......|...++..+.|+|+||+.++++.++++|+++++++++++++++.|||+++.+..++.++++|||+|+|++|++
T Consensus 120 ~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~ 199 (365)
T cd08277 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLS 199 (365)
T ss_pred ccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHH
Confidence 22222222222222234689999999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+.+|+.+|+++++++++++.++++|+++++++++ ...++.+.++++++ .++|++|||+|+...+..+++++++
T Consensus 200 ~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~ 277 (365)
T cd08277 200 AIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKL 277 (365)
T ss_pred HHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhccc
Confidence 999999999867999999999999999999999998764 11235677888777 4899999999987688999999976
Q ss_pred CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~ 325 (335)
++|+++.+|...+...+++...++ +++++.++..+++....++..+++++.++.+++.++++++|+|+|+++||+.+.+
T Consensus 278 ~~G~~v~~g~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~ 356 (365)
T cd08277 278 GWGVSVVVGVPPGAELSIRPFQLI-LGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKS 356 (365)
T ss_pred CCCEEEEEcCCCccccccCHhHHh-hCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHC
Confidence 229999999865333456666666 4889998887665445678999999999999888889999999999999999988
Q ss_pred CCeeeEEEe
Q 019822 326 PDCVKVLIT 334 (335)
Q Consensus 326 ~~~~k~vi~ 334 (335)
++..|+++.
T Consensus 357 ~~~~k~~i~ 365 (365)
T cd08277 357 GECIRTVIT 365 (365)
T ss_pred CCCceEeeC
Confidence 877798874
No 14
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=9.8e-44 Score=327.04 Aligned_cols=306 Identities=25% Similarity=0.357 Sum_probs=252.3
Q ss_pred EEEeEeecCCCCCCccc-cccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 5 VTLISFALKDSQRLFIL-VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~-v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
.|+|.++|..+....|. ++| ||+ +|+|+++| .++.+++||||++.+..+|+.|++|+.|.++.|.+..+. |...
T Consensus 40 SDlh~~~g~~~~~~~~~~i~G-HE~-~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~ 114 (350)
T COG1063 40 SDLHIYRGGEPFVPPGDIILG-HEF-VGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFY--GYAG 114 (350)
T ss_pred hhhhhccCCCCCCCCCCcccC-ccc-eEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCcccc--cccc
Confidence 48899999887766666 999 999 99999999 777899999999999999999999999999999976542 3221
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEE-cCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK-VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV 162 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v 162 (335)
.+ . + -.|+|+||+++|.+..++ +|+++ ..+++++..++++++++........++.+|+|+|+|++
T Consensus 115 ~~-----~------~--~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpI 180 (350)
T COG1063 115 LG-----G------G--IDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPI 180 (350)
T ss_pred cc-----C------C--CCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHH
Confidence 00 0 0 013999999999755555 57887 55555566699999876445555566669999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
|++++++++.+|+++|++++.+++|++++++ .|++.+++..+ .+....+.+.++|+++|++|||+|....+..+++
T Consensus 181 GLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~ 257 (350)
T COG1063 181 GLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALE 257 (350)
T ss_pred HHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHH
Confidence 9999999999999999999999999999988 66777776665 4677788889999999999999999888999999
Q ss_pred hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
.++++ |+++.+|........++...+..+++++.|+... ....+++.+++++.+|++++.+++++.++++++++|++
T Consensus 258 ~~r~g-G~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~ 334 (350)
T COG1063 258 ALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYE 334 (350)
T ss_pred HhcCC-CEEEEEeccCCccCccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHH
Confidence 99998 9999999987521167777888899999998421 13468999999999999999999999999999999999
Q ss_pred HhcCCC--eeeEEEeC
Q 019822 322 LLKQPD--CVKVLITI 335 (335)
Q Consensus 322 ~~~~~~--~~k~vi~~ 335 (335)
.+.+.+ ..|+++.+
T Consensus 335 ~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 335 LFADRKEEAIKVVLKP 350 (350)
T ss_pred HHHhcCCCeEEEEecC
Confidence 998754 45999864
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-43 Score=326.64 Aligned_cols=298 Identities=21% Similarity=0.303 Sum_probs=245.2
Q ss_pred EEEeEee-cCCCC--CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822 5 VTLISFA-LKDSQ--RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81 (335)
Q Consensus 5 ~d~~~~~-g~~~~--~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~ 81 (335)
.|++.+. |.++. ..+|.++| ||+ +|+|+++ ++++|++||+|++.+..+|+.|++|++|.++.|.+..+ +|.
T Consensus 42 sD~~~~~~g~~~~~~~~~p~v~G-hE~-~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~ 115 (343)
T PRK09880 42 SDLHYYQEGKVGNFVIKAPMVLG-HEV-IGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF--FGS 115 (343)
T ss_pred cccHhhccCCcccccccCCcccC-ccc-EEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce--eec
Confidence 4666664 44322 35799999 999 9999999 68899999999999999999999999999999997654 232
Q ss_pred ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822 82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT 161 (335)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~ 161 (335)
.... ....|+|+||+.++++.++++|+++++++++. ..++++||+++ .+....++++|||+|+|+
T Consensus 116 ~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~al-~~~~~~~g~~VlV~G~G~ 180 (343)
T PRK09880 116 AMYF-------------PHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLAVAIHAA-HQAGDLQGKRVFVSGVGP 180 (343)
T ss_pred cccc-------------CCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcHHHHHHHHH-HhcCCCCCCEEEEECCCH
Confidence 1000 00024999999999999999999999876654 45788999987 445667899999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
+|++++|+|+.+|+++|+++++++++++.++++|+++++++++ .++.+.. +. .+ ++|++|||+|++..+..+++
T Consensus 181 vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~-~~-~g-~~D~vid~~G~~~~~~~~~~ 254 (343)
T PRK09880 181 IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN---DDLDHYK-AE-KG-YFDVSFEVSGHPSSINTCLE 254 (343)
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc---ccHHHHh-cc-CC-CCCEEEECCCCHHHHHHHHH
Confidence 9999999999999977999999999999999999999999876 4543322 22 23 69999999998768899999
Q ss_pred hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+++++ |+++.+|... ...++++..++.+++++.++... .++++.++++++++++++.++++++|+|+|+++||+
T Consensus 255 ~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~ 328 (343)
T PRK09880 255 VTRAK-GVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALI 328 (343)
T ss_pred HhhcC-CEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHH
Confidence 99998 9999999754 34567777777899999987632 467999999999999998888999999999999999
Q ss_pred HhcCCCe-eeEEEeC
Q 019822 322 LLKQPDC-VKVLITI 335 (335)
Q Consensus 322 ~~~~~~~-~k~vi~~ 335 (335)
.+.+++. .|+++.+
T Consensus 329 ~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 329 FAGDKTQAAKVQLVF 343 (343)
T ss_pred HHhcCCCceEEEEeC
Confidence 9988765 5999874
No 16
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.9e-43 Score=328.34 Aligned_cols=313 Identities=42% Similarity=0.787 Sum_probs=252.8
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc-CCCccccccCcee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSVRGQKL 96 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~-~g~~~~~~~~~~~ 96 (335)
.+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|.+|++|.++.|.+......|... +...++...|.-.
T Consensus 62 ~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~ 139 (378)
T PLN02827 62 LFPRIFG-HEA-SGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPV 139 (378)
T ss_pred CCCeeec-ccc-eEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCccc
Confidence 3588999 999 999999999999999999999999999999999999999999874221111110 0000000001000
Q ss_pred ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822 97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA 176 (335)
Q Consensus 97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~ 176 (335)
.+....|+|+||+.+++..++++|+++++++++.+++.+.++|+++++.+++.++++|||+|+|++|++++|+|+++|++
T Consensus 140 ~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~ 219 (378)
T PLN02827 140 YHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGAS 219 (378)
T ss_pred ccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 00112359999999999999999999999999999888899998887778899999999999999999999999999996
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
.|+++++++++.+.++++|+++++++++ ...++.+.+++++++ ++|++||++|....+..+++.+++++|+++.+|..
T Consensus 220 ~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~ 297 (378)
T PLN02827 220 QIIGVDINPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVP 297 (378)
T ss_pred eEEEECCCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCc
Confidence 6889998999999999999999998764 113577778888877 89999999998767899999998832899999986
Q ss_pred CCccccchh-HHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 257 VDAMVPLNV-IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 257 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
.. ..++.. ..++.+++++.|+..+.+....++..+++++.++++++.++++++|+|+++++|++.+.+++..|+||.+
T Consensus 298 ~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~ 376 (378)
T PLN02827 298 KA-KPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM 376 (378)
T ss_pred CC-CccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence 53 233333 3466699999998766554456788999999999999887899999999999999999988878998864
No 17
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=7.6e-42 Score=316.94 Aligned_cols=294 Identities=26% Similarity=0.423 Sum_probs=241.3
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccc----
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALN---- 79 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~---- 79 (335)
.|++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|++|++|.++.|.+..+...
T Consensus 52 sD~~~~~g~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~ 129 (360)
T PLN02586 52 SDLHTIKNEWGFTRYPIVPG-HEI-VGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGH 129 (360)
T ss_pred hhHhhhcCCcCCCCCCccCC-cce-eEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCcccccccccc
Confidence 46666777665446789999 999 9999999999999999999986554 5799999999999999987543210
Q ss_pred -ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822 80 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG 158 (335)
Q Consensus 80 -g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G 158 (335)
|...+ |+|+||+.+|++.++++|+++++++++++++.+.|+|+++.....+.++++|||.|
T Consensus 130 ~g~~~~------------------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G 191 (360)
T PLN02586 130 DGTKNY------------------GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAG 191 (360)
T ss_pred CCCcCC------------------CccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEEC
Confidence 11122 48999999999999999999999999999999999999886666678999999999
Q ss_pred CCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822 159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 237 (335)
Q Consensus 159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~ 237 (335)
+|++|++++|+|+.+|+ +|++++.+++++ +.++++|+++++++++ . +.+++.++ ++|++||++|....+.
T Consensus 192 ~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~ 262 (360)
T PLN02586 192 LGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG--TMDYIIDTVSAVHALG 262 (360)
T ss_pred CCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC--CCCEEEECCCCHHHHH
Confidence 99999999999999999 888887666654 4568899999998765 3 24555543 6999999999876789
Q ss_pred HHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 238 EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 238 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
.++++++++ |+++.+|.... ...+++..++.++..+.++..++ ..+++++++++.+|++++. + ++|+|+|++
T Consensus 263 ~~~~~l~~~-G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~ 334 (360)
T PLN02586 263 PLLGLLKVN-GKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEIN 334 (360)
T ss_pred HHHHHhcCC-cEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHH
Confidence 999999998 99999997643 45667777777888888776443 3578999999999998753 4 589999999
Q ss_pred HHHHHhcCCCe-eeEEEeC
Q 019822 318 KAIQLLKQPDC-VKVLITI 335 (335)
Q Consensus 318 ea~~~~~~~~~-~k~vi~~ 335 (335)
+||+.+.+++. .|+++.+
T Consensus 335 ~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 335 TAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHHcCCCcEEEEEEc
Confidence 99999988876 4988864
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=7.8e-42 Score=319.55 Aligned_cols=305 Identities=23% Similarity=0.315 Sum_probs=239.5
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc----cccc
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA----LNGL 81 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~----~~g~ 81 (335)
|++.+.|.++. .+|.++| ||+ +|+|+++|++|++|++||||++.+...|+.|++|++|+++.|.+.... .+|+
T Consensus 49 D~~~~~g~~~~-~~p~i~G-hE~-~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~ 125 (393)
T TIGR02819 49 DQHMVRGRTTA-PTGLVLG-HEI-TGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGY 125 (393)
T ss_pred HHHHHCCCCCC-CCCcccc-cee-EEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecc
Confidence 56666676543 4689999 999 999999999999999999999999999999999999999999974321 0121
Q ss_pred ccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCc----ccccccccchhhhhHHHHHhcCCCCCCEEE
Q 019822 82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDP----SDASFLSCGFTTGYGAAWKEAKVEKGSSVA 155 (335)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~~~~Vl 155 (335)
...+ . -.|+|+||+.+|+. .++++|++++. ..++++.+++.++|+++ .+.++.++++||
T Consensus 126 ~~~~------------~--~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~Vl 190 (393)
T TIGR02819 126 VDMG------------G--WVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVY 190 (393)
T ss_pred cccC------------C--CCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEE
Confidence 1000 0 02489999999964 79999998754 34667777899999987 568899999999
Q ss_pred EEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh--
Q 019822 156 VLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-- 233 (335)
Q Consensus 156 I~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-- 233 (335)
|.|+|++|++++|+|+.+|++.|+++++++++++.++++|++.+...++ .++.+.++++++++++|++||++|.+
T Consensus 191 V~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~ 267 (393)
T TIGR02819 191 IAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEAR 267 (393)
T ss_pred EECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccc
Confidence 9889999999999999999955677778889999999999975443343 45777788888877999999999985
Q ss_pred ------------HHHHHHHHhhccCCeEEEEEccCCC-cc-----------ccchhHHHhhcCcEEEEeeccCCCCcCcH
Q 019822 234 ------------SLLSEALETTKVGKGKVIVIGVGVD-AM-----------VPLNVIALACGGRTLKGTTFGGIKTKSDL 289 (335)
Q Consensus 234 ------------~~~~~~~~~l~~~~G~~v~~g~~~~-~~-----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 289 (335)
..++.+++.++++ |+++.+|.... .. .++....++.+++++.+.. ....+.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~ 343 (393)
T TIGR02819 268 GHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYN 343 (393)
T ss_pred cccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhH
Confidence 3789999999998 99999998632 11 2233334445666666532 1112334
Q ss_pred HHHHHHHhCCCCCCCCcee-EEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 290 PTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 290 ~~~~~~i~~~~~~~~~~~~-~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
.++++++.++++++.++++ ++|||+|+++||+.+.+++..|++|.+
T Consensus 344 ~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~ 390 (393)
T TIGR02819 344 RNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDP 390 (393)
T ss_pred HHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeC
Confidence 6799999999999887777 789999999999999888778999864
No 19
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.9e-42 Score=309.32 Aligned_cols=270 Identities=22% Similarity=0.317 Sum_probs=226.9
Q ss_pred cccccccceEEEEEeCCCCC------cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822 22 VFSGTKVSGKVVESAGDEVK------EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK 95 (335)
Q Consensus 22 v~G~~e~~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~ 95 (335)
++| ||+ +|+|+++|++|+ +|++||||++.+...|+.|++|+.|.++.|.+..+ +|....+ +
T Consensus 1 v~G-HE~-~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~-------~-- 67 (280)
T TIGR03366 1 VLG-HEI-VGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK--YGHEALD-------S-- 67 (280)
T ss_pred CCC-ccc-ceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh--cCccccc-------C--
Confidence 578 999 999999999999 89999999999999999999999999999987655 2432100 0
Q ss_pred eecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 019822 96 LYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG 174 (335)
Q Consensus 96 ~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G 174 (335)
.....|+|+||+.+|++ .++++|+++++++++.+++.+.|+|+++ ++....++++|||+|+|++|++++|+|+++|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012489999999997 7999999999999999998999999987 4556679999999999999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 175 AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 175 ~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
+++|++++++++|++.++++|++.++++++ ..+.++++++++++|++||++|.+..++.++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 955999999999999999999999888754 3456667777779999999999887889999999998 9999999
Q ss_pred cCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC--CCCCCCceeEEeechhH
Q 019822 255 VGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEI 316 (335)
Q Consensus 255 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l~~~ 316 (335)
.... ...+++...++.+++++.|+..+ ..++++++++++.++ ++++.++++++|||+|+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 7543 34567778888899999987643 246799999999974 67777889999999874
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.6e-41 Score=313.80 Aligned_cols=299 Identities=24% Similarity=0.353 Sum_probs=251.4
Q ss_pred EEeEeecC-CCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALK-DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~-~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.+. .+...+|.++| ||+ +|+|+++|+++..+ +||+|++.+..+|+.|.+|++|.++.|.+... .|...+
T Consensus 39 D~~~~~~~~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~~~ 113 (349)
T TIGR03201 39 DLSYYYMGVRTNHALPLALG-HEI-SGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKM--PGNDMQ 113 (349)
T ss_pred chHHHcCCCCccCCCCeecc-ccc-eEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCc--cCcCCC
Confidence 45444332 33345789999 999 99999999999887 99999999999999999999999999986543 243333
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCC------CCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP------SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG 158 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G 158 (335)
| +|+||+.++++.++++|+ ++++++++++++++.|+|+++. ...+.++++|+|+|
T Consensus 114 G------------------~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G 174 (349)
T TIGR03201 114 G------------------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIG 174 (349)
T ss_pred C------------------cccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEEC
Confidence 4 899999999999999999 8999999999889999999874 57889999999999
Q ss_pred CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc----EEEEcCCChH
Q 019822 159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD----YCFECTGVPS 234 (335)
Q Consensus 159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d----~vid~~g~~~ 234 (335)
+|++|++++|+|+.+|+ +|++++++++++++++++|+++++++.+....++.+.++++++++++| ++|||+|+..
T Consensus 175 ~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~ 253 (349)
T TIGR03201 175 AGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKP 253 (349)
T ss_pred CCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChH
Confidence 99999999999999999 899999999999999999999999876511135777788888888887 8999999987
Q ss_pred HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822 235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 314 (335)
Q Consensus 235 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~ 314 (335)
.++.++++++++ |+++.+|.... ..+++...++.++.++.++...+ ..++..++++++++++++.++++ +|||+
T Consensus 254 ~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~ 327 (349)
T TIGR03201 254 GQESALSLLSHG-GTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLD 327 (349)
T ss_pred HHHHHHHHHhcC-CeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHH
Confidence 788899999998 99999998753 34566667776788888875332 46789999999999998877775 79999
Q ss_pred hHHHHHHHhcCCCee-eEEEeC
Q 019822 315 EIDKAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 315 ~~~ea~~~~~~~~~~-k~vi~~ 335 (335)
++++||+.+.+++.. |+++++
T Consensus 328 ~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 328 QIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HHHHHHHHHHcCCccceEEecC
Confidence 999999999888765 888763
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.3e-41 Score=316.44 Aligned_cols=294 Identities=22% Similarity=0.388 Sum_probs=241.5
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccC-CCCCCcccccCCCCCCcCcccccc----
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIG-ECKECENCTSEMTNLCLKYPIALN---- 79 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~g~~~~c~~~~~~~~---- 79 (335)
.|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+.. .|+.|++|++|.++.|.+..+...
T Consensus 46 sD~~~~~G~~~~~~~p~i~G-hE~-aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~ 123 (375)
T PLN02178 46 SDLHTIKNHWGFSRYPIIPG-HEI-VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSS 123 (375)
T ss_pred HHHHHhcCCCCCCCCCcccC-cee-eEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCcccccccccc
Confidence 36666777665445789999 999 99999999999999999999876654 699999999999999997643100
Q ss_pred -ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC-CCCCCEEEEE
Q 019822 80 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK-VEKGSSVAVL 157 (335)
Q Consensus 80 -g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~~~~VlI~ 157 (335)
|...+ |+|+||+.+|++.++++|+++++++++++++...|+|+++..... .+++++|+|.
T Consensus 124 ~g~~~~------------------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~ 185 (375)
T PLN02178 124 DGTRNQ------------------GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVN 185 (375)
T ss_pred CCCcCC------------------CccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEE
Confidence 11112 489999999999999999999999999999999999998754432 3689999999
Q ss_pred cCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHH
Q 019822 158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL 236 (335)
Q Consensus 158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~ 236 (335)
|+|++|++++|+|+.+|+ +|+++++++++ .+.++++|+++++++++ . +.+++.++ ++|++|||+|.+..+
T Consensus 186 G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~~--~~D~vid~~G~~~~~ 256 (375)
T PLN02178 186 GLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAVG--TMDFIIDTVSAEHAL 256 (375)
T ss_pred cccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhhC--CCcEEEECCCcHHHH
Confidence 999999999999999999 88888876554 67788999999998764 2 34555553 699999999987678
Q ss_pred HHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822 237 SEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316 (335)
Q Consensus 237 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~ 316 (335)
..++++++++ |+++.+|... ...+++...++.+++++.|+..++ ..++.++++++.+|++++. + ++|||+|+
T Consensus 257 ~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~ 328 (375)
T PLN02178 257 LPLFSLLKVS-GKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDI 328 (375)
T ss_pred HHHHHhhcCC-CEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHH
Confidence 9999999997 9999999764 345667777778999999886543 3578899999999998754 4 57999999
Q ss_pred HHHHHHhcCCCe-eeEEEeC
Q 019822 317 DKAIQLLKQPDC-VKVLITI 335 (335)
Q Consensus 317 ~ea~~~~~~~~~-~k~vi~~ 335 (335)
++||+.+.+++. .|+++.+
T Consensus 329 ~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 329 NSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHcCCCceEEEEEe
Confidence 999999988876 4988864
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=4.6e-41 Score=310.61 Aligned_cols=287 Identities=23% Similarity=0.344 Sum_probs=243.5
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 98 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~ 98 (335)
+|.++| ||+ +|+|+++|+++++|++||+|++.+..+|+.|++|..|.++.|.+... +|...+|
T Consensus 53 ~p~i~G-~e~-~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~~G------------- 115 (347)
T PRK10309 53 YPITLG-HEF-SGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSRRDG------------- 115 (347)
T ss_pred CCcccc-cce-EEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce--eccCCCC-------------
Confidence 588999 999 99999999999999999999999999999999999999999986543 3433344
Q ss_pred ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEE
Q 019822 99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKI 178 (335)
Q Consensus 99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V 178 (335)
+|+||+.++++.++++|+++++++++++. +++++++++ +...+.++++|||+|+|++|++++|+|+.+|++.|
T Consensus 116 -----~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v 188 (347)
T PRK10309 116 -----GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSV 188 (347)
T ss_pred -----ccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 89999999999999999999999988774 566678764 66788899999999999999999999999999558
Q ss_pred EEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc-EEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 179 IGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD-YCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 179 ~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
+++++++++++.++++|+++++++++ .+ ...+.+++.+.++| ++|||+|+...+..++++++++ |+++.+|...
T Consensus 189 ~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~ 263 (347)
T PRK10309 189 TAIDINSEKLALAKSLGAMQTFNSRE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLH 263 (347)
T ss_pred EEECCCHHHHHHHHHcCCceEecCcc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence 99999999999999999999998876 44 45677777777898 9999999877889999999998 9999999765
Q ss_pred Cccccch---hHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCe-eeE
Q 019822 258 DAMVPLN---VIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKV 331 (335)
Q Consensus 258 ~~~~~~~---~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~-~k~ 331 (335)
. ..+++ ...++.+++++.|+..+... ..+++++++++++++++++.++++++|+|+|+++|++.+.+++. .|+
T Consensus 264 ~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKv 342 (347)
T PRK10309 264 H-DLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKV 342 (347)
T ss_pred C-CcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEE
Confidence 3 22332 23566789999998754321 13578899999999999888899999999999999999988775 499
Q ss_pred EEeC
Q 019822 332 LITI 335 (335)
Q Consensus 332 vi~~ 335 (335)
++++
T Consensus 343 vv~~ 346 (347)
T PRK10309 343 LLQI 346 (347)
T ss_pred EEeC
Confidence 8864
No 23
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1e-41 Score=309.79 Aligned_cols=277 Identities=26% Similarity=0.342 Sum_probs=233.8
Q ss_pred EEEeEeecC-CCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 5 VTLISFALK-DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 5 ~d~~~~~g~-~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
.|.+.++|. .+..++|.|+| .|+ +|+|+++|++|+.|++||+|+..+ .. + .
T Consensus 42 ~D~~~r~G~~~~~~~~P~i~G-~d~-aG~V~avG~~V~~~~~GdrV~~~~-~~-----------------------~--~ 93 (326)
T COG0604 42 IDVLVRQGLAPPVRPLPFIPG-SEA-AGVVVAVGSGVTGFKVGDRVAALG-GV-----------------------G--R 93 (326)
T ss_pred HHHHhccCCCCCCCCCCCccc-cee-EEEEEEeCCCCCCcCCCCEEEEcc-CC-----------------------C--C
Confidence 577888887 33457999999 999 999999999999999999998653 10 0 1
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV 162 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v 162 (335)
.|+|+||+.+|++.++++|+++|+++||+++++++|||++|+...+++++++|||+|+ |+|
T Consensus 94 ------------------~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgV 155 (326)
T COG0604 94 ------------------DGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGV 155 (326)
T ss_pred ------------------CCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchH
Confidence 2499999999999999999999999999999999999999999899999999999985 999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|.+++||||++|+ .++++..++++.++++++|+++++++++ .+|.+.++++++++++|+|+|++|+. .+..++++
T Consensus 156 G~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~ 230 (326)
T COG0604 156 GSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAA 230 (326)
T ss_pred HHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHH
Confidence 9999999999998 6777777788888999999999999998 78999999999999999999999998 78899999
Q ss_pred hccCCeEEEEEccCC-CccccchhHHHhhcCcEEEEeeccCC--C-CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822 243 TKVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGI--K-TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 318 (335)
Q Consensus 243 l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e 318 (335)
++++ |+++.+|... ....+++...+..+.+...+...... . ..+.+..+.+++++|++++. +.++|||+|..+
T Consensus 231 l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~ 307 (326)
T COG0604 231 LAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPA 307 (326)
T ss_pred hccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHH
Confidence 9998 9999999987 35566667777778888888776532 1 13456678999999996665 778999999655
Q ss_pred HHHHhcC-CCe-eeEEEeC
Q 019822 319 AIQLLKQ-PDC-VKVLITI 335 (335)
Q Consensus 319 a~~~~~~-~~~-~k~vi~~ 335 (335)
+...... ++. .|+|+++
T Consensus 308 a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 308 AAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHHHcccCCcceEEEeC
Confidence 5553322 344 5999874
No 24
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.3e-40 Score=309.18 Aligned_cols=311 Identities=25% Similarity=0.359 Sum_probs=256.4
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCc------ccCCCEEEecccCCCCCCcccccCCCCCCcCcccccc
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKE------VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 79 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~ 79 (335)
|++...|.++...+|.++| ||+ +|+|+++|++++. |++||+|++.+..+|+.|.+|+.+.++.|.+..++
T Consensus 41 d~~~~~g~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-- 116 (361)
T cd08231 41 DVHTVAGRRPRVPLPIILG-HEG-VGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY-- 116 (361)
T ss_pred cHHHhcCCCCCCCCCcccc-cCC-ceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhc--
Confidence 4555567665445788999 999 9999999999986 99999999999999999999999999999987663
Q ss_pred ccccCCCccccccCceeecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822 80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG 158 (335)
Q Consensus 80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G 158 (335)
|...+. +. ....|+|+||+.++++ +++++|+++++++++++++++.|||+++.+.....++++|||+|
T Consensus 117 ~~~~~~-------~~----~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g 185 (361)
T cd08231 117 GHEASC-------DD----PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG 185 (361)
T ss_pred cccccc-------cC----CCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC
Confidence 432110 00 0012589999999996 89999999999999998889999999986666667999999999
Q ss_pred CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822 159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE 238 (335)
Q Consensus 159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~ 238 (335)
+|++|++++++|+.+|+++|+++++++++.++++++|++.++++++....++...+++.++++++|++|||+|+...+..
T Consensus 186 ~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~ 265 (361)
T cd08231 186 AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPE 265 (361)
T ss_pred CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHH
Confidence 89999999999999999789999999999999999999999887751112234567888888899999999998667899
Q ss_pred HHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC--CCCCCCceeEEeechh
Q 019822 239 ALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEE 315 (335)
Q Consensus 239 ~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l~~ 315 (335)
++++++++ |+++.+|.... ...+++...++.+++++.++...+ ++++.++++++.++ .+.+.++++++|++++
T Consensus 266 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~ 341 (361)
T cd08231 266 GLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLED 341 (361)
T ss_pred HHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHH
Confidence 99999998 99999997643 344566666677899998876433 46788999999888 6667778889999999
Q ss_pred HHHHHHHhcCCCeeeEEEeC
Q 019822 316 IDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 316 ~~ea~~~~~~~~~~k~vi~~ 335 (335)
+++||+.+.+++.+|++|.+
T Consensus 342 ~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 342 INEALELAESGTALKVVIDP 361 (361)
T ss_pred HHHHHHHHHcCCceEEEeCC
Confidence 99999999888777999864
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=6.9e-41 Score=306.91 Aligned_cols=285 Identities=21% Similarity=0.265 Sum_probs=240.2
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
.|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+. ..|+.|++|..|.++.|.+..+ .|...
T Consensus 42 ~D~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~ 117 (329)
T TIGR02822 42 TDLHVSEGDLPVHRPRVTPG-HEV-VGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWDT 117 (329)
T ss_pred hhHHHHcCCCCCCCCCccCC-cce-EEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCccc
Confidence 35556667765444578999 999 9999999999999999999987664 4799999999999999987655 35444
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
+| +|+||+.++++.++++|+++++++++.+++.+.|||+++ ..++++++++|||+|+|++|
T Consensus 118 ~G------------------~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG 178 (329)
T TIGR02822 118 DG------------------GYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSA 178 (329)
T ss_pred CC------------------cceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHH
Confidence 44 899999999999999999999999999999999999988 46889999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++|+|+.+|+ +|++++++++++++++++|+++++++.+ .. ..++|+++++.+....+..+++++
T Consensus 179 ~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~----------~~~~d~~i~~~~~~~~~~~~~~~l 244 (329)
T TIGR02822 179 HLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD---TP----------PEPLDAAILFAPAGGLVPPALEAL 244 (329)
T ss_pred HHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc---cC----------cccceEEEECCCcHHHHHHHHHhh
Confidence 999999999999 8999999999999999999999987543 11 126899999888777889999999
Q ss_pred ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
+++ |+++.+|...+...+++...++.+++++.++... .+.++.++++++.+++++ +++++|+|+|+++|++.+
T Consensus 245 ~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~ 317 (329)
T TIGR02822 245 DRG-GVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN---TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDL 317 (329)
T ss_pred CCC-cEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC---CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHH
Confidence 997 9999999754323356666667789999887533 245688899999999975 367899999999999999
Q ss_pred cCCCee-eEEE
Q 019822 324 KQPDCV-KVLI 333 (335)
Q Consensus 324 ~~~~~~-k~vi 333 (335)
.+++.. |+||
T Consensus 318 ~~~~~~Gkvvl 328 (329)
T TIGR02822 318 KAGRFDGAAVL 328 (329)
T ss_pred HcCCCceEEEe
Confidence 888765 8886
No 26
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.1e-40 Score=308.11 Aligned_cols=320 Identities=38% Similarity=0.643 Sum_probs=274.2
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc-ccccccC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~-~~g~~~~ 84 (335)
|++.+.|.++ ..+|.++| ||+ +|+|+++|++++.+++||+|++.+...|+.|++|++|.++.|...... ..|...+
T Consensus 41 d~~~~~g~~~-~~~~~i~g-~e~-~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (365)
T cd05279 41 DLHVIDGKLP-TPLPVILG-HEG-AGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSD 117 (365)
T ss_pred hHHHhcCCCC-CCCCcccc-cce-eEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccC
Confidence 4555556554 24678999 999 999999999999999999999998899999999999999999987653 2455677
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
|+.+++-+|...++..+.|+|++|+.++++.++++|+++++++++++++++.+||+++.+.+++.++++|||+|+|++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~ 197 (365)
T cd05279 118 GTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGL 197 (365)
T ss_pred CcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 88888888887777777789999999999999999999999999999989999999988888999999999998899999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch--hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK--SISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~--~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
+++++|+.+|+..|+++++++++.+.++++|+++++++++ . ++.+.++++++ +++|+++|++|....+..++++
T Consensus 198 ~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~ 273 (365)
T cd05279 198 SVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDA 273 (365)
T ss_pred HHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHH
Confidence 9999999999956888888999999999999999998876 4 67777888775 5899999999876688999999
Q ss_pred hc-cCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 243 TK-VGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 243 l~-~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
++ ++ |+++.+|.... ...+++...+ .++.++.|+..++....+.+..++++++++.+++.++.+++++++++++||
T Consensus 274 l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~ 351 (365)
T cd05279 274 TRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGF 351 (365)
T ss_pred hccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHH
Confidence 99 97 99999987542 3456666666 588888888766655567888999999999988776788999999999999
Q ss_pred HHhcCCCeeeEEEe
Q 019822 321 QLLKQPDCVKVLIT 334 (335)
Q Consensus 321 ~~~~~~~~~k~vi~ 334 (335)
+.+.+++..|+++.
T Consensus 352 ~~~~~~~~~~~~~~ 365 (365)
T cd05279 352 DLMRSGESIRTILT 365 (365)
T ss_pred HHHhCCCceeeeeC
Confidence 99988777787763
No 27
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.9e-39 Score=301.09 Aligned_cols=324 Identities=37% Similarity=0.642 Sum_probs=258.4
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~ 83 (335)
.|++.+.|.++ ..+|.++| ||+ +|+|+++|++++.+++||+|++.+..+|+.|++|.++.++.|.+..... .|...
T Consensus 47 ~D~~~~~g~~~-~~~p~v~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~ 123 (373)
T cd08299 47 SDDHVVSGKLV-TPFPVILG-HEA-AGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQ 123 (373)
T ss_pred ccHHHhcCCCC-CCCCcccc-ccc-eEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCccccccccccc
Confidence 35556666653 34688999 999 9999999999999999999999888999999999999999998754310 12222
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
++..++..+|...++..+.|+|+||+.++++.++++|+++++++++++++++.|||+++.....++++++|||+|+|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG 203 (373)
T cd08299 124 DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVG 203 (373)
T ss_pred CCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence 22222333333333333357999999999999999999999999999999999999998888899999999999989999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++++|+.+|+++|+++++++++++.++++|++++++..+ ...++...+++++++ ++|+++||+|++..+..++..+
T Consensus 204 ~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-~~d~vld~~g~~~~~~~~~~~~ 281 (373)
T cd08299 204 LSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD-YKKPIQEVLTEMTDG-GVDFSFEVIGRLDTMKAALASC 281 (373)
T ss_pred HHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc-cchhHHHHHHHHhCC-CCeEEEECCCCcHHHHHHHHhh
Confidence 99999999999867999999999999999999999998764 112367777777764 8999999999766777766655
Q ss_pred -ccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 244 -KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 244 -~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+.+ |+++.+|.... ...+++...+ .++.++.++..+.+....++..+++.+.++.+++.+++++.|+++++++||+
T Consensus 282 ~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~ 359 (373)
T cd08299 282 HEGY-GVSVIVGVPPSSQNLSINPMLL-LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFD 359 (373)
T ss_pred ccCC-CEEEEEccCCCCceeecCHHHH-hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence 566 99999997653 2344554433 3678888887766544466777888888887777777889999999999999
Q ss_pred HhcCCCeeeEEEeC
Q 019822 322 LLKQPDCVKVLITI 335 (335)
Q Consensus 322 ~~~~~~~~k~vi~~ 335 (335)
.+.+++..|+++++
T Consensus 360 ~~~~~~~~k~~~~~ 373 (373)
T cd08299 360 LLRSGKSIRTVLTF 373 (373)
T ss_pred HHhCCCcceEEEeC
Confidence 99887777988864
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=5.9e-39 Score=297.01 Aligned_cols=284 Identities=25% Similarity=0.417 Sum_probs=249.0
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc-CCCccccccCceee
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSVRGQKLY 97 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~-~g~~~~~~~~~~~~ 97 (335)
+|.++| ||+ +|+|+++|++++.|++||+|+..+..+|+.|.+|++|.++.|.+..+ .|+.. +
T Consensus 64 ~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------- 126 (351)
T cd08233 64 APVTLG-HEF-SGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLGGGG------------- 126 (351)
T ss_pred CCceec-ccc-eEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccCCCC-------------
Confidence 688999 999 99999999999999999999999999999999999999999986533 23221 2
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
|+|++|+.++.+.++++|+++++++++++ .++.|||+++ ...++.++++|||+|+|.+|++++|+|+.+|+++
T Consensus 127 -----g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~ 199 (351)
T cd08233 127 -----GGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASK 199 (351)
T ss_pred -----CceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 38999999999999999999999998776 5788999988 7788999999999999999999999999999978
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+++++++++.++++++|++.++++++ .++.+.++++++++++|+++|++|+...++.++++++++ |+++.+|...
T Consensus 200 v~~~~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 275 (351)
T cd08233 200 IIVSEPSEARRELAEELGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE 275 (351)
T ss_pred EEEECCCHHHHHHHHHhCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC
Confidence 999999999999999999999999887 778888988888778999999999776889999999997 9999999866
Q ss_pred CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH-HHHHHHhcCCCe--eeEEEe
Q 019822 258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI-DKAIQLLKQPDC--VKVLIT 334 (335)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~-~ea~~~~~~~~~--~k~vi~ 334 (335)
...+++...+..+++++.++... ..+++.+++++++++++++.++++++|+++|+ ++|++.+.+++. +|++|.
T Consensus 276 -~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 276 -KPISFNPNDLVLKEKTLTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred -CCCccCHHHHHhhCcEEEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 45667777777899999987643 24789999999999999887788899999996 799999888774 698873
No 29
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.6e-39 Score=299.84 Aligned_cols=294 Identities=27% Similarity=0.333 Sum_probs=230.8
Q ss_pred EEEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822 5 VTLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81 (335)
Q Consensus 5 ~d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~ 81 (335)
.|++.+.|.++. ..+|.++| ||+ +|+|+++|++ +.|++||+|+..+...|+.|.+|+.|.++.|+...+...|.
T Consensus 40 ~D~~~~~g~~~~~~~~~~p~i~G-~e~-~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~ 116 (355)
T cd08230 40 TDREIVAGEYGTAPPGEDFLVLG-HEA-LGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGI 116 (355)
T ss_pred ccHHHHcCCCCCCCCCCCCeeec-ccc-ceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCc
Confidence 466667776543 24689999 999 9999999999 89999999999998899999999999999998754321222
Q ss_pred c-cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH------hcCCCCCCEE
Q 019822 82 M-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK------EAKVEKGSSV 154 (335)
Q Consensus 82 ~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~------~~~~~~~~~V 154 (335)
. .+ |+|+||+.++++.++++|++++ +. +++..++++++.++.. ..+..++++|
T Consensus 117 ~~~~------------------G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~v 176 (355)
T cd08230 117 KGLH------------------GFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRA 176 (355)
T ss_pred CCCC------------------ccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEE
Confidence 1 22 4899999999999999999998 43 4444466655544322 2235689999
Q ss_pred EEEcCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 155 AVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 155 lI~G~g~vG~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
||+|+|++|++++|+||++|+ +|+++++ ++++++.++++|++. +++.+ .++.+ .+ . ..++|+||||+|
T Consensus 177 lI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~-~--~~~~d~vid~~g 247 (355)
T cd08230 177 LVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK-L--VGEFDLIIEATG 247 (355)
T ss_pred EEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh-h--cCCCCEEEECcC
Confidence 999999999999999999999 8999987 688999999999987 45554 34433 22 1 237999999999
Q ss_pred ChHHHHHHHHhhccCCeEEEEEccCCC-ccccch----hHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC----C
Q 019822 232 VPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLN----VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF----K 302 (335)
Q Consensus 232 ~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~----~ 302 (335)
++..+..+++.++++ |+++.+|...+ ...+++ ...++.+++++.|+..++ +++++.+++++.++.+ .
T Consensus 248 ~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~ 323 (355)
T cd08230 248 VPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGV 323 (355)
T ss_pred CHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccc
Confidence 876789999999998 99999998764 344454 345677999999976433 4678899999988762 3
Q ss_pred CCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 303 ~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
+.++++++|+++|+++||+.+.++. .|+++++
T Consensus 324 ~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 324 LERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred hHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 5667899999999999999887654 5999874
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2e-40 Score=276.42 Aligned_cols=274 Identities=24% Similarity=0.263 Sum_probs=235.0
Q ss_pred EEEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 4 FVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 4 ~~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
|.|.+.++|.|...++|+++| -|. +|+|+++|++|+++++||||.... +
T Consensus 49 fid~y~RkGlY~~~plPytpG-mEa-aGvVvAvG~gvtdrkvGDrVayl~-----------------------------~ 97 (336)
T KOG1197|consen 49 FIDLYFRKGLYDPAPLPYTPG-MEA-AGVVVAVGEGVTDRKVGDRVAYLN-----------------------------P 97 (336)
T ss_pred HHHHHHhccccCCCCCCcCCC-ccc-ceEEEEecCCccccccccEEEEec-----------------------------c
Confidence 467788899996667999999 999 999999999999999999997431 2
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV 162 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v 162 (335)
. |.|+|++.+|...++++|+.+++.+||++...+.|||.-+++...+++|++|||+.+ |++
T Consensus 98 ~------------------g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGV 159 (336)
T KOG1197|consen 98 F------------------GAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGV 159 (336)
T ss_pred c------------------hhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccH
Confidence 2 389999999999999999999999999999899999999988899999999999964 999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|+++.||++..|+ .++++..+.+|++.+++.|+.|+++++. +|+...++++++|+|+|+++|.+|.. .+...+.+
T Consensus 160 Glll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~ 234 (336)
T KOG1197|consen 160 GLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAA 234 (336)
T ss_pred HHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccch-hhHHHHHH
Confidence 9999999999999 9999999999999999999999999998 99999999999999999999999998 88999999
Q ss_pred hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEe-eccCCCCcCc----HHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT-TFGGIKTKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
|++. |.++.+|..++...+++...+.-+.+.+... .+|-...+.. ..+++.++.++.+++. +.++|||+++.
T Consensus 235 Lk~~-G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~va 311 (336)
T KOG1197|consen 235 LKPM-GKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVA 311 (336)
T ss_pred hccC-ceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHH
Confidence 9998 9999999988843444444444455544432 2222222222 3467788889997777 88999999999
Q ss_pred HHHHHhcCCCee-eEEEe
Q 019822 318 KAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 318 ea~~~~~~~~~~-k~vi~ 334 (335)
+|+.++++.... |+++.
T Consensus 312 dA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 312 DAHADIESRKTVGKVLLL 329 (336)
T ss_pred HHHHHHHhhhccceEEEe
Confidence 999999987765 88874
No 31
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.4e-38 Score=295.00 Aligned_cols=298 Identities=24% Similarity=0.388 Sum_probs=239.1
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++...+|.++| ||+ +|+|+++|++++.|++||+|++.+. ..|+.|.+|++|.++.|.+..+...+....
T Consensus 50 D~~~~~g~~~~~~~p~i~G-~E~-~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~ 127 (357)
T PLN02514 50 DLHQIKNDLGMSNYPMVPG-HEV-VGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTD 127 (357)
T ss_pred HHHhhcCCcCcCCCCccCC-cee-eEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccC
Confidence 5555667665445789999 999 9999999999999999999986654 369999999999999998753210000000
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
| . ...|+|+||+.+++..++++|+++++++++++++.+.|||+++......+++++|+|+|+|++|+
T Consensus 128 g--------~-----~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~ 194 (357)
T PLN02514 128 G--------K-----PTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGH 194 (357)
T ss_pred C--------c-----cCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHH
Confidence 0 0 01248999999999999999999999999999999999999886655568999999999899999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
+++|+|+.+|+ +|+++++++++++.+ +++|+++++++.+ . ..+++.+. ++|++||++|....++.+++++
T Consensus 195 ~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l 265 (357)
T PLN02514 195 MGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLL 265 (357)
T ss_pred HHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC--CCcEEEECCCchHHHHHHHHHh
Confidence 99999999999 888888777776554 6799988776654 2 23444443 6999999999766889999999
Q ss_pred ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
+++ |+++.+|.... ..+++...++.+++++.|+..++ ..++.++++++.++++. +++ ++|||+|+.+||+.+
T Consensus 266 ~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~ 337 (357)
T PLN02514 266 KLD-GKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERL 337 (357)
T ss_pred ccC-CEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHH
Confidence 998 99999998653 45666777778999999987544 35789999999999854 445 589999999999999
Q ss_pred cCCCee-eEEEeC
Q 019822 324 KQPDCV-KVLITI 335 (335)
Q Consensus 324 ~~~~~~-k~vi~~ 335 (335)
.+++.. |+++.+
T Consensus 338 ~~~~~~gk~v~~~ 350 (357)
T PLN02514 338 EKNDVRYRFVVDV 350 (357)
T ss_pred HcCCCceeEEEEc
Confidence 888764 888864
No 32
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.2e-37 Score=289.60 Aligned_cols=321 Identities=34% Similarity=0.556 Sum_probs=261.4
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++ ..+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|.+|+++..+.|+...++.+|...++
T Consensus 41 d~~~~~g~~~-~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (363)
T cd08279 41 DLHVVTGDLP-APLPAVLG-HEG-AGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDG 117 (363)
T ss_pred HHHHhcCCCC-CCCCcccc-ccc-eEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCC
Confidence 3444455554 34677899 999 99999999999999999999999999999999999999999997765434433332
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
.+++...|...+...+.|+|++|+.++++.++++|+++++++++++++.+.+||.++++..++.++++|||+|+|.+|++
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a 197 (363)
T cd08279 118 TRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLN 197 (363)
T ss_pred cccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence 22222212221111233589999999999999999999999999999999999999888889999999999988999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+.+|+.+|+++++++++.+.++++|++++++++. .++...+++++.++++|+++|++++...+..+++++++
T Consensus 198 ~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~ 274 (363)
T cd08279 198 AIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRK 274 (363)
T ss_pred HHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhc
Confidence 999999999955999999999999999999999998886 67888888887777899999999976688999999999
Q ss_pred CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 246 GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 246 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
+ |+++.++.... ....++...+..++..+.++.++.......++.++++++++.+++.++++++++++++++||+.+.
T Consensus 275 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~ 353 (363)
T cd08279 275 G-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADML 353 (363)
T ss_pred C-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHh
Confidence 7 99999987653 345566666666788888876544334567889999999999877666778999999999999998
Q ss_pred CCCeeeEEE
Q 019822 325 QPDCVKVLI 333 (335)
Q Consensus 325 ~~~~~k~vi 333 (335)
+++..|.|+
T Consensus 354 ~~~~~~~~~ 362 (363)
T cd08279 354 AGENARGVI 362 (363)
T ss_pred cCCceeEEe
Confidence 887776665
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-37 Score=288.11 Aligned_cols=304 Identities=24% Similarity=0.348 Sum_probs=247.7
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++...+|.++| ||+ +|+|+++|++++++++||+|+..+...|+.|..|..|+++.|.+... |+...
T Consensus 40 d~~~~~g~~~~~~~~~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~---~~~~~- 113 (351)
T cd08285 40 DVHTVWGGAPGERHGMILG-HEA-VGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLG---GWKFS- 113 (351)
T ss_pred hHHHhcCCCCCCCCCcccC-cce-EEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCC---Ccccc-
Confidence 4555566655556689999 999 99999999999999999999998888999999999999999986431 11100
Q ss_pred CccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
....|+|++|+.++.+ .++++|++++++++++++..+.|||+++ +.++++++++|||+|+|++|
T Consensus 114 -------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG 179 (351)
T cd08285 114 -------------NFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVG 179 (351)
T ss_pred -------------CCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHH
Confidence 0012489999999974 8999999999999999988999999985 77889999999999889999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++|+|+.+|+..|+++++++++.+.++++|+++++++++ .++...+.++++++++|+++|++|++..+..+++++
T Consensus 180 ~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l 256 (351)
T cd08285 180 LMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVL 256 (351)
T ss_pred HHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHh
Confidence 99999999999967999999999999999999999999886 678888888887779999999999876889999999
Q ss_pred ccCCeEEEEEccCCC-ccccchh--HHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCc-eeEEeechhHHHH
Q 019822 244 KVGKGKVIVIGVGVD-AMVPLNV--IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL-LTHHVKLEEIDKA 319 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~-~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~l~~~~ea 319 (335)
+++ |+++.+|.... ...+++. .....+...+.+.... ..++++.++++++.+|++++.++ .++.++++++++|
T Consensus 257 ~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a 333 (351)
T cd08285 257 KPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEA 333 (351)
T ss_pred hcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHH
Confidence 997 99999987654 2233332 2223456666654321 13467899999999999888544 4456899999999
Q ss_pred HHHhcCCC--eeeEEEeC
Q 019822 320 IQLLKQPD--CVKVLITI 335 (335)
Q Consensus 320 ~~~~~~~~--~~k~vi~~ 335 (335)
|+.+.+++ .+|+++++
T Consensus 334 ~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 334 LMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHHHhcccCCeEEEEEeC
Confidence 99998876 36999875
No 34
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.1e-37 Score=289.90 Aligned_cols=320 Identities=30% Similarity=0.484 Sum_probs=254.4
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 83 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~ 83 (335)
.|++.+.|.++ ..+|.++| ||+ +|+|+++|+++..|++||+|++.+. .|+.|.+|+.+..+.|.+..... .|..+
T Consensus 42 ~d~~~~~g~~~-~~~p~v~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (365)
T cd08278 42 TDLVVRDGGLP-TPLPAVLG-HEG-AGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRP 117 (365)
T ss_pred ccHHHhcCCCC-CCCCcccc-cce-eEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCccccccccccc
Confidence 35555666655 34678999 999 9999999999999999999998775 89999999999999998643321 12111
Q ss_pred CCCccccccCcee--ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822 84 DSTSRMSVRGQKL--YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT 161 (335)
Q Consensus 84 ~g~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~ 161 (335)
+|..-....+.+. .+....|+|++|+.++++.++++|+++++++++.+++++.||+.++.+...+.++++|||+|+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~ 197 (365)
T cd08278 118 DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGA 197 (365)
T ss_pred CCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCH
Confidence 1100000000000 00123468999999999999999999999999999999999999988888899999999998899
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
+|++++++|+++|++.|+++++++++.+.++++|++.++++++ .++.+.+++++ +.++|+++||+|+...+..+++
T Consensus 198 vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~ 273 (365)
T cd08278 198 VGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE---EDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVD 273 (365)
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHH
Confidence 9999999999999967999999999999999999999999876 67778888877 6699999999997668899999
Q ss_pred hhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 242 TTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
+++++ |+++.+|.... ....++...+..+++++.++........+.+.+++++++++++++.+++ +.++++++++|+
T Consensus 274 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~ 351 (365)
T cd08278 274 ALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAI 351 (365)
T ss_pred HhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHH
Confidence 99998 99999997632 3455666666568899988765433233557888999999998654444 589999999999
Q ss_pred HHhcCCCeeeEEEe
Q 019822 321 QLLKQPDCVKVLIT 334 (335)
Q Consensus 321 ~~~~~~~~~k~vi~ 334 (335)
+.+.+++..|++++
T Consensus 352 ~~~~~~~~~k~~~~ 365 (365)
T cd08278 352 ADSESGKVIKPVLR 365 (365)
T ss_pred HHHHCCCceEEEEC
Confidence 99988877898874
No 35
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=4e-37 Score=282.74 Aligned_cols=291 Identities=20% Similarity=0.311 Sum_probs=245.7
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|..+...+|.++| ||+ +|+|+++|+++..|++||+|++.+ ...|+.|.+|..|+++.|....+ .|+..+
T Consensus 41 d~~~~~g~~~~~~~p~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~~~ 116 (333)
T cd08296 41 DAFVKEGAMPGLSYPRVPG-HEV-VGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVTRD 116 (333)
T ss_pred HHHHHhCCCCCCCCCcccC-cce-eEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCc--cCcccC
Confidence 4445566655445688999 999 999999999999999999998754 56899999999999999998765 344333
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
| ++++|+.++.+.++++|+++++++++.+++.+.|||+++. ...+.++++|||+|+|.+|+
T Consensus 117 g------------------~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~ 177 (333)
T cd08296 117 G------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGH 177 (333)
T ss_pred C------------------cceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHH
Confidence 4 8999999999999999999999999999999999999874 45899999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++|+.+|+ +|+++++++++++.++++|+++++++++ .++...++++ .++|+++|++|....+..++++++
T Consensus 178 ~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~ 250 (333)
T cd08296 178 LAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK---EDVAEALQEL---GGAKLILATAPNAKAISALVGGLA 250 (333)
T ss_pred HHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC---ccHHHHHHhc---CCCCEEEECCCchHHHHHHHHHcc
Confidence 99999999999 8999999999999999999999998876 6677777665 279999999976668899999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
++ |+++.+|... ...+++...++.+++++.++..+. ..++..+++++.+++++. .+ +.++++++.+||+.+.
T Consensus 251 ~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~ 322 (333)
T cd08296 251 PR-GKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMM 322 (333)
T ss_pred cC-CEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHH
Confidence 98 9999999865 355666666777999999986432 356888889988887553 34 5899999999999998
Q ss_pred CCCee-eEEEe
Q 019822 325 QPDCV-KVLIT 334 (335)
Q Consensus 325 ~~~~~-k~vi~ 334 (335)
+++.. |++++
T Consensus 323 ~~~~~gk~v~~ 333 (333)
T cd08296 323 SGKARFRVVLT 333 (333)
T ss_pred CCCCceeEEeC
Confidence 88764 88874
No 36
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=7.9e-38 Score=288.16 Aligned_cols=284 Identities=18% Similarity=0.191 Sum_probs=221.8
Q ss_pred EEEeEeecCCCC----CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccc
Q 019822 5 VTLISFALKDSQ----RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 80 (335)
Q Consensus 5 ~d~~~~~g~~~~----~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g 80 (335)
.|++.++|.++. ..+|.++| ||+ +|+|+++|.+ .|++||+|++.+...|+ |++| +..+.|.+..+ .|
T Consensus 40 sD~~~~~G~~~~~~~~~~~P~i~G-hE~-~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~--~g 110 (341)
T cd08237 40 ADQRYYQGNRSPEALKKKLPMALI-HEG-IGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF--RS 110 (341)
T ss_pred ccHHHHcCCCCcccccCCCCeecc-cee-EEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcce--eE
Confidence 477888887642 35799999 999 9999998875 69999999998887777 5566 35677876544 23
Q ss_pred cccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH--hcCCCCCCEEEEEc
Q 019822 81 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLG 158 (335)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~VlI~G 158 (335)
...+| +|+||+.+|++.++++|+++++++|+++. +++++|+++.. .+.++++++|||+|
T Consensus 111 ~~~~G------------------~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G 171 (341)
T cd08237 111 SGYDG------------------FMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWG 171 (341)
T ss_pred ecCCC------------------ceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEEC
Confidence 33334 89999999999999999999998877554 88899998754 34568899999999
Q ss_pred CCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC---hH
Q 019822 159 LGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV---PS 234 (335)
Q Consensus 159 ~g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~---~~ 234 (335)
+|++|++++|+++. +|..+|++++++++|++.+++.++..+++ ++ ....++|+|||++|+ +.
T Consensus 172 ~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~ 237 (341)
T cd08237 172 DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID-------DI-------PEDLAVDHAFECVGGRGSQS 237 (341)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh-------hh-------hhccCCcEEEECCCCCccHH
Confidence 99999999999986 66558999999999999998766543221 11 112369999999994 45
Q ss_pred HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC---CCCCCCceeEEe
Q 019822 235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK---EFKLHQLLTHHV 311 (335)
Q Consensus 235 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~ 311 (335)
.+..++++++++ |+++.+|... ...+++...++.+++++.|+..++ ..+++++++++.++ +.++.++++++|
T Consensus 238 ~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 312 (341)
T cd08237 238 AINQIIDYIRPQ-GTIGLMGVSE-YPVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVF 312 (341)
T ss_pred HHHHHHHhCcCC-cEEEEEeecC-CCcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhcccc
Confidence 789999999998 9999999754 345667777778999999986432 45789999999998 335777889999
Q ss_pred ec---hhHHHHHHHhcCCCeeeEEEeC
Q 019822 312 KL---EEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 312 ~l---~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
+| ++++++|+.+.++...|++|++
T Consensus 313 ~l~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (341)
T cd08237 313 PVRSINDIHRAFESDLTNSWGKTVMEW 339 (341)
T ss_pred ccccHHHHHHHHHHHhhcCcceEEEEe
Confidence 98 5677777777655456998864
No 37
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.6e-36 Score=283.99 Aligned_cols=316 Identities=27% Similarity=0.370 Sum_probs=253.1
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-----c
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-----N 79 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-----~ 79 (335)
.|++.+.|.++..++|.++| ||+ +|+|+++|+++..+++||+|++.+...|+.|++|..+.+++|.+..... +
T Consensus 40 ~d~~~~~g~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (386)
T cd08283 40 SDLHLYHGYIPGMKKGDILG-HEF-MGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLY 117 (386)
T ss_pred hhhhhhcCCCCCCCCCcccc-ccc-eEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccc
Confidence 46667778776656789999 999 9999999999999999999999988899999999999999999765431 1
Q ss_pred ccccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822 80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL 157 (335)
Q Consensus 80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~ 157 (335)
|....+ ..|.........|++++|+.++++ .++++|++++++++++++..+.|||+++ +...+.++++|||+
T Consensus 118 ~~~~~~-----~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~ 191 (386)
T cd08283 118 GHAGAG-----IFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVW 191 (386)
T ss_pred cccccc-----ccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEE
Confidence 111100 000000000013589999999988 8999999999999999998999999998 78889999999999
Q ss_pred cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCCh---
Q 019822 158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVP--- 233 (335)
Q Consensus 158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~~--- 233 (335)
|+|++|.+++++|+..|+.+|+++++++++.+.+++++...++++.. . ++...++++++++++|++||++|+.
T Consensus 192 g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~ 268 (386)
T cd08283 192 GCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHG 268 (386)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccc
Confidence 88999999999999999856999999999999999985446777765 4 4788888888877899999999752
Q ss_pred ------------------HHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHH
Q 019822 234 ------------------SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDK 295 (335)
Q Consensus 234 ------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 295 (335)
..+..++++++++ |+++.+|........++...+..+++++.+.... ..+.+..++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~ 344 (386)
T cd08283 269 SPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLEL 344 (386)
T ss_pred cccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCC---chHHHHHHHHH
Confidence 3678899999998 9999998765423344554556688888886522 24568889999
Q ss_pred HhCCCCCCCCceeEEeechhHHHHHHHhcCCC--eeeEEEeC
Q 019822 296 CKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI 335 (335)
Q Consensus 296 i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~--~~k~vi~~ 335 (335)
+.++++.+.+++++.++++++++|++.+.+++ ..|++|++
T Consensus 345 l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 345 IESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 99999887666778999999999999988765 35999863
No 38
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.9e-36 Score=279.51 Aligned_cols=301 Identities=28% Similarity=0.377 Sum_probs=252.6
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
.|++.+.|.++...+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|++|..+.++.|...... .|...+
T Consensus 40 ~d~~~~~g~~~~~~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 116 (345)
T cd08286 40 TDLHILKGDVPTVTPGRILG-HEG-VGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNLID 116 (345)
T ss_pred hhhHHHcCCCCCCCCCceec-ccc-eEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccc-cccccC
Confidence 35555667766555688999 999 999999999999999999999999889999999999999999865332 122223
Q ss_pred CCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV 162 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v 162 (335)
|++++|+.++.+ .++++|++++..+++.+++.++|||.++....++.++++|||.|+|.+
T Consensus 117 ------------------g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~ 178 (345)
T cd08286 117 ------------------GTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPV 178 (345)
T ss_pred ------------------CeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHH
Confidence 389999999987 899999999999999999899999998777888999999999988999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|.+++|+|+.+|+.+|+++++++++.+.++++|++.++++++ .++...+.++++++++|+++|+++....++.+++.
T Consensus 179 g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~ 255 (345)
T cd08286 179 GLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQEL 255 (345)
T ss_pred HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHh
Confidence 999999999999448999999999999999999999999886 66777888888777999999999987688899999
Q ss_pred hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
++++ |+++.+|.... ...+++..++.+++++.+.... ...+..++++++++.+++.++++++++++++++|++.
T Consensus 256 l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~ 329 (345)
T cd08286 256 VAPG-GHIANVGVHGK-PVDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDT 329 (345)
T ss_pred ccCC-cEEEEecccCC-CCCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHH
Confidence 9998 99999986543 3455665656688888875321 2467889999999998876667889999999999999
Q ss_pred hcCC---CeeeEEEeC
Q 019822 323 LKQP---DCVKVLITI 335 (335)
Q Consensus 323 ~~~~---~~~k~vi~~ 335 (335)
+.+. ...|++|++
T Consensus 330 ~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 330 FSAAAKHKALKVIIDF 345 (345)
T ss_pred HhccCCCCeeEEEEeC
Confidence 9875 356999875
No 39
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.3e-36 Score=280.64 Aligned_cols=302 Identities=29% Similarity=0.388 Sum_probs=248.5
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccc-ccccC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~-g~~~~ 84 (335)
|++.+.|.++...+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|.+|.+|+.+.|.....+.+ +...
T Consensus 41 d~~~~~g~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 117 (347)
T cd05278 41 DLHIYRGGVPGAKHGMILG-HEF-VGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRI- 117 (347)
T ss_pred hHHHHcCCCCCCCCCceec-cce-EEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCC-
Confidence 5556677776666789999 999 99999999999999999999999999999999999999999987654311 1111
Q ss_pred CCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV 162 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v 162 (335)
.|+|++|+.++++ +++++|+++++++++++++++.|||+++ ...++.++++|||.|+|.+
T Consensus 118 -----------------~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~v 179 (347)
T cd05278 118 -----------------DGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPV 179 (347)
T ss_pred -----------------CCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHH
Confidence 2489999999987 9999999999999999999999999987 6788999999999888999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|.+++|+|+.+|..+|+++++++++.+.++++|++.+++++. .++...++++++++++|++||++++...+...+++
T Consensus 180 g~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~ 256 (347)
T cd05278 180 GLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKV 256 (347)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHH
Confidence 999999999999658889988888999999999999999887 66888888887777999999999985578999999
Q ss_pred hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
++++ |+++.+|..............+.+++++.++.... .+.++.+++++.++.+++.+++.+.++++++++|++.
T Consensus 257 l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 332 (347)
T cd05278 257 VRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRL 332 (347)
T ss_pred hhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHH
Confidence 9998 99999986543211111112234777777654322 4578889999999998866556678999999999999
Q ss_pred hcCCCe--eeEEEeC
Q 019822 323 LKQPDC--VKVLITI 335 (335)
Q Consensus 323 ~~~~~~--~k~vi~~ 335 (335)
+.+++. .|++++.
T Consensus 333 ~~~~~~~~~~~vv~~ 347 (347)
T cd05278 333 FDNKPDGCIKVVIRP 347 (347)
T ss_pred HhcCCCCceEEEecC
Confidence 887765 4888763
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.8e-36 Score=279.14 Aligned_cols=294 Identities=23% Similarity=0.359 Sum_probs=249.4
Q ss_pred EEeEeecCCC---CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822 6 TLISFALKDS---QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82 (335)
Q Consensus 6 d~~~~~g~~~---~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~ 82 (335)
|++.+.|.++ ...+|.++| ||+ +|+|+++|+++..|++||+|+..+...|+.|+.|+.|..++|.+.++ .|+.
T Consensus 41 d~~~~~g~~~~~~~~~~~~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 116 (340)
T cd05284 41 DLHVIDGVWGGILPYKLPFTLG-HEN-AGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF--PGIG 116 (340)
T ss_pred hHHHHcCCCcccccCCCCeecc-cce-eEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcc--cCcc
Confidence 4444556554 235688999 999 99999999999999999999999888999999999999999998877 3554
Q ss_pred cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh-cCCCCCCEEEEEcCCH
Q 019822 83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGT 161 (335)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~ 161 (335)
.+| +|++|+.+++++++++|+++++++++.+++.+.|||+++... ..+.++++|||+|+|.
T Consensus 117 ~~g------------------~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~ 178 (340)
T cd05284 117 TDG------------------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGG 178 (340)
T ss_pred CCC------------------cceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcH
Confidence 454 899999999999999999999999999999999999998765 4688899999999978
Q ss_pred HHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 162 VGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 162 vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
+|++++++|+.+| . +|+++++++++.+.++++|++++++++. . +...+++++++.++|+++|++|+....+.++
T Consensus 179 vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~ 253 (340)
T cd05284 179 LGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAA 253 (340)
T ss_pred HHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHH
Confidence 9999999999999 6 8999999999999999999999999886 5 7788888887778999999999866889999
Q ss_pred HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
++++++ |+++.+|.... .+++......+++++.++... ....+..++++++++.+++ ..+.++++++++|+
T Consensus 254 ~~l~~~-g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~ 324 (340)
T cd05284 254 KLLAKG-GRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKV---EITKFPLEDANEAL 324 (340)
T ss_pred HHhhcC-CEEEEEcCCCC--CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHH
Confidence 999997 99999987642 344444444688888887543 2457888999999998764 34679999999999
Q ss_pred HHhcCCCee-eEEEeC
Q 019822 321 QLLKQPDCV-KVLITI 335 (335)
Q Consensus 321 ~~~~~~~~~-k~vi~~ 335 (335)
+.+.+++.. |+++.+
T Consensus 325 ~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 325 DRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHcCCccceEEecC
Confidence 999887765 888753
No 41
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.8e-36 Score=277.70 Aligned_cols=295 Identities=19% Similarity=0.301 Sum_probs=240.3
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++...+|.++| ||+ +|+|+++|++++.+++||+|++.+...|+.|.+|.+|.++.|.+... .++..+|
T Consensus 40 d~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 115 (339)
T PRK10083 40 DSHIYRGHNPFAKYPRVIG-HEF-FGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV--LGVHRDG 115 (339)
T ss_pred chHHHcCCCCcCCCCcccc-cce-EEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce--EEEccCC
Confidence 5555666665555789999 999 99999999999999999999999999999999999999999976433 2332333
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
+|+||+.+++..++++|++++++.++ +...+.+++. +.+..++.++++|+|+|+|++|++
T Consensus 116 ------------------~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~ 175 (339)
T PRK10083 116 ------------------GFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLT 175 (339)
T ss_pred ------------------cceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHH
Confidence 89999999999999999999998876 4457788885 557788999999999999999999
Q ss_pred HHHHHHH-cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 166 AVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 166 ai~la~~-~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
++|+|+. +|+..++++++++++.+.++++|+++++++++ .++.+.+... +.++|++||++|++..+..++++++
T Consensus 176 ~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~~~~--g~~~d~vid~~g~~~~~~~~~~~l~ 250 (339)
T PRK10083 176 IVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---EPLGEALEEK--GIKPTLIIDAACHPSILEEAVTLAS 250 (339)
T ss_pred HHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHhcC--CCCCCEEEECCCCHHHHHHHHHHhh
Confidence 9999996 69966888999999999999999999998876 5566655432 3356799999997767899999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
++ |+++.+|.... ...+....+..+++++.++.. ....+..++++++++.+++.+++++.|+++++++|++.+.
T Consensus 251 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~ 324 (339)
T PRK10083 251 PA-ARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFE 324 (339)
T ss_pred cC-CEEEEEccCCC-CceecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHh
Confidence 98 99999987653 333444445557777776542 2467889999999999887656778999999999999987
Q ss_pred CCC--eeeEEEeC
Q 019822 325 QPD--CVKVLITI 335 (335)
Q Consensus 325 ~~~--~~k~vi~~ 335 (335)
+++ ..|+++++
T Consensus 325 ~~~~~~~kvvv~~ 337 (339)
T PRK10083 325 KDQRHCCKVLLTF 337 (339)
T ss_pred cCCCceEEEEEec
Confidence 543 35988863
No 42
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=9.8e-36 Score=279.57 Aligned_cols=284 Identities=18% Similarity=0.192 Sum_probs=238.2
Q ss_pred ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccc
Q 019822 21 LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIF 100 (335)
Q Consensus 21 ~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~ 100 (335)
.++| ||+ +|+|+++|++++.+++||+|++.+...|+.|+.|.++..++|....+ +|+...
T Consensus 83 ~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~---------------- 142 (393)
T cd08246 83 HIGG-SDA-SGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYETN---------------- 142 (393)
T ss_pred cccc-cce-EEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccCC----------------
Confidence 5889 999 99999999999999999999999999999999999999999986554 344311
Q ss_pred ccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh--cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822 101 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 101 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~ 177 (335)
.|+|++|+++++..++++|+++++++++.+++++.|||+++... +++.++++|||+|+ |++|++++++|+.+|+ +
T Consensus 143 -~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~ 220 (393)
T cd08246 143 -YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-N 220 (393)
T ss_pred -CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-e
Confidence 13899999999999999999999999999999999999988654 67899999999997 9999999999999999 8
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCC-------------------chhHHHHHHhhhCCC-CccEEEEcCCChHHHH
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGM-GVDYCFECTGVPSLLS 237 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~i~~~~~g~-g~d~vid~~g~~~~~~ 237 (335)
++++++++++.+.++++|+++++++++.+ ...+...+.++++++ ++|++||++|+. .+.
T Consensus 221 vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~ 299 (393)
T cd08246 221 PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFP 299 (393)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHH
Confidence 88888899999999999999998864310 013567788888887 899999999985 788
Q ss_pred HHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 238 EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 238 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
.++++++++ |+++.+|.......+++...+..++.++.++...+ .+++..++++++++.+.+ .+++++++++++
T Consensus 300 ~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~ 373 (393)
T cd08246 300 TSVFVCDRG-GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETP 373 (393)
T ss_pred HHHHHhccC-CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHH
Confidence 999999997 99999987543334455566666888888876443 357888999999998764 367899999999
Q ss_pred HHHHHhcCC-Cee-eEEE
Q 019822 318 KAIQLLKQP-DCV-KVLI 333 (335)
Q Consensus 318 ea~~~~~~~-~~~-k~vi 333 (335)
+|++.+.++ +.. |+++
T Consensus 374 ~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 374 DAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred HHHHHHHhCccccceEEE
Confidence 999999877 554 7765
No 43
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.5e-35 Score=274.11 Aligned_cols=285 Identities=25% Similarity=0.376 Sum_probs=238.0
Q ss_pred CccccccccccceEEEEEeCCCCC--cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVK--EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK 95 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~ 95 (335)
.+|.++| ||+ +|+|+++|+.++ .|++||+|+..+.++|+.|++|..|.++.|..... +|+...
T Consensus 61 ~~p~~~g-~e~-~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~----------- 125 (350)
T cd08256 61 KPPMIPG-HEF-VGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL--YGFQNN----------- 125 (350)
T ss_pred CCCcccC-cce-eEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc--eeeccC-----------
Confidence 4678899 999 999999999998 89999999999999999999999999999986432 344210
Q ss_pred eecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 019822 96 LYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG 174 (335)
Q Consensus 96 ~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G 174 (335)
..|+|++|+.++++ .++++|+++++++++++ .++.|+|+++ +..++.++++|||.|+|.+|++++++|+.+|
T Consensus 126 -----~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G 198 (350)
T cd08256 126 -----VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKN 198 (350)
T ss_pred -----CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 12489999999988 67899999999999888 7899999987 7889999999999778999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 175 AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 175 ~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
+..++++++++++.+.++++|++++++++. .++...+.++++++++|+++|++|+...+..++++++++ |+++.+|
T Consensus 199 ~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g 274 (350)
T cd08256 199 PKKLIVLDLKDERLALARKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFS 274 (350)
T ss_pred CcEEEEEcCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEc
Confidence 867889999999999999999999998876 678888888888889999999999765788999999997 9999998
Q ss_pred cCCCccccchhHHH-hhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEE
Q 019822 255 VGVDAMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVL 332 (335)
Q Consensus 255 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~v 332 (335)
.... ..++....+ ..+++++.++.... ..+.+++++++++.+++.+++++.++++++++|++.+.+++.. |++
T Consensus 275 ~~~~-~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv 349 (350)
T cd08256 275 VFGD-PVTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVV 349 (350)
T ss_pred cCCC-CCccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEe
Confidence 6542 333443333 24667777765432 4688899999999988755567899999999999999887654 776
Q ss_pred E
Q 019822 333 I 333 (335)
Q Consensus 333 i 333 (335)
+
T Consensus 350 ~ 350 (350)
T cd08256 350 L 350 (350)
T ss_pred C
Confidence 4
No 44
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.3e-35 Score=275.05 Aligned_cols=290 Identities=24% Similarity=0.391 Sum_probs=238.9
Q ss_pred CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822 17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 96 (335)
Q Consensus 17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~ 96 (335)
..+|.++| ||+ +|+|+++|++++.|++||+|++.+..+|+.|+.|..|.++.|..... .|+..+|
T Consensus 85 ~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~g----------- 149 (384)
T cd08265 85 TEFPVVIG-HEF-SGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFSADG----------- 149 (384)
T ss_pred cCCCcccc-cce-EEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeecCCC-----------
Confidence 34678999 999 99999999999999999999999999999999999999999986543 3444444
Q ss_pred ecccccccceeeEEecccceEEcCCCC-------CcccccccccchhhhhHHHHHh-cCCCCCCEEEEEcCCHHHHHHHH
Q 019822 97 YHIFSCSTWSEYMVIDANYVVKVDPSI-------DPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVD 168 (335)
Q Consensus 97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~vG~~ai~ 168 (335)
+|++|+.++++.++++|+++ +++ ++++..++++||++++.. .++.++++|||+|+|++|+++++
T Consensus 150 -------~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~ 221 (384)
T cd08265 150 -------AFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA 221 (384)
T ss_pred -------cceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH
Confidence 89999999999999999863 444 555666889999998766 68999999999988999999999
Q ss_pred HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCC
Q 019822 169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGK 247 (335)
Q Consensus 169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~ 247 (335)
+|+.+|+.+|+++++++++.+.++++|+++++++++....++...++++++++++|+|+|++|.+ ..+..++++++++
T Consensus 222 lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~- 300 (384)
T cd08265 222 LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN- 300 (384)
T ss_pred HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-
Confidence 99999987799999899999999999999999887511136888888888888999999999863 4678999999997
Q ss_pred eEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822 248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327 (335)
Q Consensus 248 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~ 327 (335)
|+++.+|.... ..+++...+..+..++.++.... ....+.+++++++++.+++.+++++.|+++++++|++.+.++.
T Consensus 301 G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 377 (384)
T cd08265 301 GKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERT 377 (384)
T ss_pred CEEEEECCCCC-CCcccHHHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCC
Confidence 99999986543 33444455555677777765322 2346889999999999877666778999999999999977665
Q ss_pred eeeEEE
Q 019822 328 CVKVLI 333 (335)
Q Consensus 328 ~~k~vi 333 (335)
..|+++
T Consensus 378 ~~kvvv 383 (384)
T cd08265 378 DGKITI 383 (384)
T ss_pred CceEEe
Confidence 557765
No 45
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3e-35 Score=277.41 Aligned_cols=278 Identities=19% Similarity=0.226 Sum_probs=223.1
Q ss_pred CccccccccccceEEEEEeCCCCC-cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 96 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~ 96 (335)
.+|.++| ||+ +|+|+++|++|+ .|++||+|++.+...|+.|..|. + +|+..+|
T Consensus 61 ~~p~i~G-hE~-~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~~~G----------- 114 (410)
T cd08238 61 KEPVILG-HEF-AGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYTYPG----------- 114 (410)
T ss_pred CCCceec-ccc-EEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCC-C------------ccccCCC-----------
Confidence 3688999 999 999999999998 59999999999888899888772 1 1222233
Q ss_pred ecccccccceeeEEeccc----ceEEcCCCCCcccccccccch---hhhhHHH--------HHhcCCCCCCEEEEEcC-C
Q 019822 97 YHIFSCSTWSEYMVIDAN----YVVKVDPSIDPSDASFLSCGF---TTGYGAA--------WKEAKVEKGSSVAVLGL-G 160 (335)
Q Consensus 97 ~~~~~~g~~~~~~~v~~~----~~~~lp~~~~~~~aa~l~~~~---~ta~~~l--------~~~~~~~~~~~VlI~G~-g 160 (335)
+|+||+.++++ .++++|+++++++++++. ++ .+++.++ .++++++++++|+|+|+ |
T Consensus 115 -------~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G 186 (410)
T cd08238 115 -------GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAG 186 (410)
T ss_pred -------cceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCC
Confidence 89999999987 689999999999888652 21 1233332 24577899999999985 9
Q ss_pred HHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhc--------CCc-eEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 161 TVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKAF--------GMT-DFINPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 161 ~vG~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~l--------ga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
++|++++|+|+.+| +.+|+++++++++++.++++ |++ .++++++ ..++.+.++++++++++|++||+
T Consensus 187 ~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~ 264 (410)
T cd08238 187 PMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVF 264 (410)
T ss_pred HHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEc
Confidence 99999999999975 45799999999999999987 766 5677653 13577888888888899999999
Q ss_pred CCChHHHHHHHHhhccCCeEEEEEccCC-C-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCce
Q 019822 230 TGVPSLLSEALETTKVGKGKVIVIGVGV-D-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLL 307 (335)
Q Consensus 230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 307 (335)
+|.+..++.++++++++ |+++.++... . ...+++...++.+++++.|+..++ ..++.++++++.+|++++.+++
T Consensus 265 ~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~i 340 (410)
T cd08238 265 VPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMV 340 (410)
T ss_pred CCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcE
Confidence 99877889999999997 8887764322 1 235677777888999999976433 4678999999999999998899
Q ss_pred eEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 308 THHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 308 ~~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
+++|||+++++|++.+..+...|+++.+
T Consensus 341 t~~~~l~~~~~A~~~~~~~~~gKvvl~~ 368 (410)
T cd08238 341 THIGGLNAAAETTLNLPGIPGGKKLIYT 368 (410)
T ss_pred EEEecHHHHHHHHHHhhccCCceEEEEC
Confidence 9999999999999999843345988863
No 46
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=5.1e-35 Score=270.01 Aligned_cols=298 Identities=22% Similarity=0.360 Sum_probs=249.3
Q ss_pred EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCC
Q 019822 7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86 (335)
Q Consensus 7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~ 86 (335)
+..+.|.++...+|.++| ||+ +|+|+++|+++..|++||+|+..+...|+.|.+|+.|..+.|.++.. .++..+|
T Consensus 42 ~~~~~g~~~~~~~~~~~g-~e~-~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g- 116 (345)
T cd08260 42 WHGWQGHDPDVTLPHVPG-HEF-AGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFTHPG- 116 (345)
T ss_pred HHHhcCCCCCCCCCeeec-cce-eEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc--cccCCCC-
Confidence 334455555445688999 999 99999999999999999999988888999999999999999997643 2333333
Q ss_pred ccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 87 SRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
+|++|+.+++. +++++|+++++++++.++..+.|||+++.+..++.++++|+|+|+|.+|+
T Consensus 117 -----------------~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~ 179 (345)
T cd08260 117 -----------------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGL 179 (345)
T ss_pred -----------------cceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHH
Confidence 89999999985 99999999999999999989999999987788899999999999999999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++|+..|+ +|+++.+++++.+.++++|+++++++++ ..++...+.++..+ ++|++||++|+...+...+++++
T Consensus 180 ~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~ 255 (345)
T cd08260 180 SAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE--VEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLR 255 (345)
T ss_pred HHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhh
Confidence 99999999999 9999999999999999999999988763 13567778777777 89999999997657889999999
Q ss_pred cCCeEEEEEccCCC-cc-ccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 245 VGKGKVIVIGVGVD-AM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 245 ~~~G~~v~~g~~~~-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
++ |+++.+|.... .. ..+++..+..+++++.+.... ....+..++++++++++.+.+++++.++++++++|++.
T Consensus 256 ~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~ 331 (345)
T cd08260 256 KR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAA 331 (345)
T ss_pred cC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHH
Confidence 97 99999987654 21 455555665688888886532 24678889999999998776556789999999999999
Q ss_pred hcCCCee-eEEEe
Q 019822 323 LKQPDCV-KVLIT 334 (335)
Q Consensus 323 ~~~~~~~-k~vi~ 334 (335)
+.+++.. |+|++
T Consensus 332 ~~~~~~~~~~v~~ 344 (345)
T cd08260 332 MDDYATAGITVIT 344 (345)
T ss_pred HHcCCCCceEEec
Confidence 9887665 87764
No 47
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3.7e-35 Score=273.25 Aligned_cols=318 Identities=28% Similarity=0.430 Sum_probs=253.4
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCc---ccCCCEEEecccCCCCCCcccccCCCCCCcCccccc--cc
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKE---VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL--NG 80 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~--~g 80 (335)
|++.+.|.++. .+|.++| ||+ +|+|+.+|+++.. |++||+|+..+...|+.|.+|..+.+++|....++. .|
T Consensus 41 d~~~~~~~~~~-~~p~~~g-~e~-~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (367)
T cd08263 41 DLHVLKGELPF-PPPFVLG-HEI-SGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKG 117 (367)
T ss_pred hHHHhcCCCCC-CCCcccc-ccc-ceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccc
Confidence 44455565554 5678999 999 9999999999988 999999999999999999999999999999765321 01
Q ss_pred cccCCCccccccCceeecc--cccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822 81 LMLDSTSRMSVRGQKLYHI--FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG 158 (335)
Q Consensus 81 ~~~~g~~~~~~~~~~~~~~--~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G 158 (335)
...+|...+... ..+++ ...|++++|+.++++.++++|+++++.++++++..+.|||+++.+...+.++++|||+|
T Consensus 118 ~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g 195 (367)
T cd08263 118 TLYDGTTRLFRL--DGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG 195 (367)
T ss_pred cccCCccccccc--CCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC
Confidence 111110000000 00000 01248999999999999999999999999999999999999988878889999999998
Q ss_pred CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822 159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE 238 (335)
Q Consensus 159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~ 238 (335)
+|.+|++++++|+..|+.+|+++++++++.+.++++|++.+++++. .++...+++.++++++|+++|++++...+..
T Consensus 196 ~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~ 272 (367)
T cd08263 196 VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKL 272 (367)
T ss_pred CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence 8999999999999999944999998999999999999999999887 6788888888777799999999998656789
Q ss_pred HHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 239 ALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 239 ~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
++++++++ |+++.++.... ....++...++.+++++.++.... ..+.+..++++++++.+++.+.+++.++++++.
T Consensus 273 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~ 349 (367)
T cd08263 273 ALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEIN 349 (367)
T ss_pred HHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHH
Confidence 99999998 99999986543 234556566656888887753221 235688899999999988766677899999999
Q ss_pred HHHHHhcCCCee-eEEEe
Q 019822 318 KAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 318 ea~~~~~~~~~~-k~vi~ 334 (335)
++++.+++++.. |+|++
T Consensus 350 ~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 350 EAYENLRKGLIHGRAIVE 367 (367)
T ss_pred HHHHHHhcCCccceeeeC
Confidence 999999888754 88763
No 48
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.8e-35 Score=269.15 Aligned_cols=299 Identities=28% Similarity=0.385 Sum_probs=246.1
Q ss_pred EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
.|++.+.|.++. ..|.++| ||+ +|+|+++|+++..+++||+|+..+...|+.|..|..|+.+.|....+ ++...+
T Consensus 40 ~d~~~~~g~~~~-~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 114 (345)
T cd08287 40 SDLWPYRGVSPT-RAPAPIG-HEF-VGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAFVD 114 (345)
T ss_pred cchhhhcCCCCC-CCCcccc-cce-EEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc--ccCCCC
Confidence 355566666653 3578999 999 99999999999999999999987778899999999999999987554 343344
Q ss_pred CCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCccccc-----ccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDAS-----FLSCGFTTGYGAAWKEAKVEKGSSVAVL 157 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa-----~l~~~~~ta~~~l~~~~~~~~~~~VlI~ 157 (335)
| +|++|+.++.+ .++++|++++++.+. ++...+.+|++++ ..+.+.++++|+|.
T Consensus 115 g------------------~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~ 175 (345)
T cd08287 115 G------------------GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVV 175 (345)
T ss_pred C------------------ceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEE
Confidence 4 89999999975 999999999882221 1225678899887 46788999999998
Q ss_pred cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822 158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 237 (335)
Q Consensus 158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~ 237 (335)
|+|.+|++++++|+++|++.++++++++++.+.++++|++.+++++. ..+.+.+.++++++++|+++|++|++..+.
T Consensus 176 g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~ 252 (345)
T cd08287 176 GDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESME 252 (345)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHH
Confidence 88999999999999999966999998888999999999999999887 678888888888789999999998876889
Q ss_pred HHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 238 EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 238 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
.++++++++ |+++.++.... ...++....+.+++++.+.... ..+.+..+++++.++++++.+++++.+++++++
T Consensus 253 ~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 327 (345)
T cd08287 253 QAIAIARPG-GRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVA 327 (345)
T ss_pred HHHHhhccC-CEEEEecccCC-CCccCHHHHHhcceEEEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHH
Confidence 999999997 99999987653 3445553445689988875422 245788899999999988766567899999999
Q ss_pred HHHHHhcCCCeeeEEEeC
Q 019822 318 KAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 318 ea~~~~~~~~~~k~vi~~ 335 (335)
+|++.+.+++..|++|+.
T Consensus 328 ~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 328 EGYRAMDERRAIKVLLRP 345 (345)
T ss_pred HHHHHHhCCCceEEEeCC
Confidence 999998887777999863
No 49
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=5.9e-35 Score=269.43 Aligned_cols=301 Identities=27% Similarity=0.364 Sum_probs=245.0
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...|.++ ..+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|.+|..+.++.|.+... +|.. +
T Consensus 41 d~~~~~g~~~-~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~ 113 (344)
T cd08284 41 DLHIYRGHIP-STPGFVLG-HEF-VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL--FGYA--G 113 (344)
T ss_pred chhhhcCCCC-CCCCcccc-cce-EEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc--cccc--c
Confidence 4455555554 23477899 999 99999999999999999999999889999999999999999986532 1110 0
Q ss_pred CccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG 163 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG 163 (335)
.....|++++|+.++++ .++++|++++++++++++++++|||+++. ...+.++++|||+|+|.+|
T Consensus 114 ------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg 180 (344)
T cd08284 114 ------------SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVG 180 (344)
T ss_pred ------------cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHH
Confidence 00012489999999875 99999999999999999999999999885 4788999999999889999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++++|+.+|+.+|+++++++++.+.++++|+. +++.+. .++...+.++++++++|++||++++...+...++++
T Consensus 181 ~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l 256 (344)
T cd08284 181 LCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLV 256 (344)
T ss_pred HHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhc
Confidence 9999999999975799998889999999999975 466665 567788888888779999999999866889999999
Q ss_pred ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
+++ |+++.+|..............+.+++++.+.. ....+.+..+++++.++.+++.+++++.+++++++++++.+
T Consensus 257 ~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~ 332 (344)
T cd08284 257 RPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLF 332 (344)
T ss_pred ccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHH
Confidence 997 99999997654333444445556888877542 12356789999999999987766677889999999999988
Q ss_pred cCCCeeeEEEe
Q 019822 324 KQPDCVKVLIT 334 (335)
Q Consensus 324 ~~~~~~k~vi~ 334 (335)
.+++..|+|++
T Consensus 333 ~~~~~~k~Vi~ 343 (344)
T cd08284 333 DKRKVLKVVLD 343 (344)
T ss_pred hcCCceEEEec
Confidence 87655788875
No 50
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.6e-35 Score=270.31 Aligned_cols=285 Identities=25% Similarity=0.352 Sum_probs=241.3
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|+++..+++||+|+..+...|+.|+.|.++.++.|.+..+. |....|
T Consensus 65 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------ 128 (350)
T cd08240 65 KLPLVLG-HEI-VGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIFQDG------------ 128 (350)
T ss_pred CCCcccc-cce-eEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eeeccC------------
Confidence 3567899 999 999999999999999999999999999999999999999999876542 333333
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
++++|+.++.+.++++|+++++.+++++.+.+.|||+++.+...+.++++|||+|+|++|++++|+|+.+|+++
T Consensus 129 ------~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~ 202 (350)
T cd08240 129 ------GYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPAN 202 (350)
T ss_pred ------cceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCe
Confidence 89999999999999999999999999999999999999876666678999999988999999999999999978
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+++++++++.+.++++|++.+++.++ ..+...+.+..++ ++|++||++|....+..++++++++ |+++.+|...
T Consensus 203 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~ 277 (350)
T cd08240 203 IIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFG 277 (350)
T ss_pred EEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCC
Confidence 999999999999999999988888876 6677778877777 8999999999766889999999998 9999998765
Q ss_pred CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822 258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~~ 335 (335)
. ...++.....+++.++.+..... .+++..++++++++.+++. ..+.++++++++|++.+.+++.. |+++++
T Consensus 278 ~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 278 G-EATLPLPLLPLRALTIQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred C-CCcccHHHHhhcCcEEEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 4 22333334455888888765433 3678889999999987653 45689999999999999887754 888753
No 51
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.4e-34 Score=266.33 Aligned_cols=296 Identities=26% Similarity=0.455 Sum_probs=245.8
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...|.++...+|.++| +|+ +|+|+++|++++.|++||+|+..+..+|+.|..|+.+.+|.|.+... +++...
T Consensus 40 d~~~~~~~~~~~~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 114 (337)
T cd08261 40 DLHIYHGRNPFASYPRILG-HEL-SGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQV--LGVHRD- 114 (337)
T ss_pred ChHHHcCCCCcCCCCcccc-ccc-EEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCe--eeecCC-
Confidence 4455556655545678999 999 99999999999999999999998888999999999999999975433 233223
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
|+|++|+.++++ ++++|+++++++++++ ..+.++++++ +..++.++++|||+|+|.+|.+
T Consensus 115 -----------------g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~ 174 (337)
T cd08261 115 -----------------GGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLG 174 (337)
T ss_pred -----------------CcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence 389999999999 9999999999998877 4778888876 7788999999999988999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+.+|+ +|+++.+++++.++++++|+++++++++ .++...++++++++++|+++|++++...+..+++++++
T Consensus 175 a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~ 250 (337)
T cd08261 175 VIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAH 250 (337)
T ss_pred HHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhc
Confidence 9999999999 8999988999999999999999999887 67888888888877899999999886688999999999
Q ss_pred CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~ 325 (335)
+ |+++.++.... ...++...+..+++.+.+.. ....+.+..++++++++.+++.+.+...+++++++++++.+.+
T Consensus 251 ~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 325 (337)
T cd08261 251 G-GRVVLVGLSKG-PVTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEA 325 (337)
T ss_pred C-CEEEEEcCCCC-CCccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhc
Confidence 7 99999986542 33444445555777777653 2234578889999999998764346678999999999999988
Q ss_pred CC-e-eeEEEeC
Q 019822 326 PD-C-VKVLITI 335 (335)
Q Consensus 326 ~~-~-~k~vi~~ 335 (335)
++ . .|+|+++
T Consensus 326 ~~~~~~k~v~~~ 337 (337)
T cd08261 326 PPGGVIKVLIEF 337 (337)
T ss_pred CCCceEEEEEeC
Confidence 73 4 4998875
No 52
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-34 Score=267.52 Aligned_cols=285 Identities=26% Similarity=0.400 Sum_probs=237.7
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|++++.|++||+|++.+..+|+.|++|+.|.+++|.+-.+.. .....
T Consensus 53 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------- 116 (343)
T cd05285 53 KEPMVLG-HES-AGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAA-TPPVD------------- 116 (343)
T ss_pred CCCcccC-cce-eEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccc-cccCC-------------
Confidence 3577899 999 9999999999999999999999999999999999999999998642210 01122
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
|+|++|+.++++.++++|+++++++++.+ .++.+|++++ +.+.+.++++|||.|+|++|.+++++|+.+|++.
T Consensus 117 -----g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~ 189 (343)
T cd05285 117 -----GTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATK 189 (343)
T ss_pred -----CceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 38999999999999999999999998877 4788999886 8899999999999988999999999999999944
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchh---HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS---ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~---~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
|+++++++++.+.++++|++.++++++ .+ +.+.+.+.++++++|+++||+|+...+...+++++++ |+++.+|
T Consensus 190 v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g 265 (343)
T cd05285 190 VVVTDIDPSRLEFAKELGATHTVNVRT---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVG 265 (343)
T ss_pred EEEECCCHHHHHHHHHcCCcEEecccc---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEc
Confidence 999998999999999999999998876 44 3777888888778999999999865789999999997 9999998
Q ss_pred cCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC--eeeEE
Q 019822 255 VGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVL 332 (335)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~--~~k~v 332 (335)
.... ...+++..+..+++.+.+.... .+.+..+++++.++.+.+.+++++.++++++.+|++.+.+++ .+|++
T Consensus 266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~ 340 (343)
T cd05285 266 MGKP-EVTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVV 340 (343)
T ss_pred cCCC-CCccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEE
Confidence 6543 2344444566677887765422 256888999999998765555778899999999999998874 36998
Q ss_pred Ee
Q 019822 333 IT 334 (335)
Q Consensus 333 i~ 334 (335)
|.
T Consensus 341 ~~ 342 (343)
T cd05285 341 IE 342 (343)
T ss_pred Ee
Confidence 74
No 53
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.2e-34 Score=267.38 Aligned_cols=298 Identities=24% Similarity=0.379 Sum_probs=246.4
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|+..+.|.++...+|.++| +|+ +|+|+++|++++.|++||+|+..+...|+.|++|..|+++.|....+ .|....
T Consensus 40 d~~~~~g~~~~~~~~~~~g-~~~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 114 (343)
T cd08235 40 DVKKIRGGHTDLKPPRILG-HEI-AGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKK--FGNLYD- 114 (343)
T ss_pred cHHHHcCCCccCCCCcccc-cce-EEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcce--eccCCC-
Confidence 4444455553334577999 999 99999999999999999999999999999999999999999987544 233333
Q ss_pred CccccccCceeecccccccceeeEEecccc-----eEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCC
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANY-----VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG 160 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g 160 (335)
|+|++|+.++++. ++++|+++++.+++++ ..+.+||+++. ..++.++++|||+|+|
T Consensus 115 -----------------g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g 175 (343)
T cd08235 115 -----------------GGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAG 175 (343)
T ss_pred -----------------CcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCC
Confidence 3899999999998 9999999999998876 68899999884 4589999999999889
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
.+|.+++++|+..|++.|+++++++++.+.++++|+++++++++ .++...+++.++++++|+++||+++...+...+
T Consensus 176 ~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~ 252 (343)
T cd08235 176 PIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQAL 252 (343)
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHH
Confidence 99999999999999933999999999999999999999999887 778888888888878999999999776788999
Q ss_pred HhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822 241 ETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea 319 (335)
++++++ |+++.++.... ....+++..+.++++.+.+.... ..+.+..++++++++.+.+.+.+...+++++++++
T Consensus 253 ~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a 328 (343)
T cd08235 253 ELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEA 328 (343)
T ss_pred HHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHH
Confidence 999997 99999986543 23445555666688888765432 24678889999999998765556678999999999
Q ss_pred HHHhcCCCeeeEEEe
Q 019822 320 IQLLKQPDCVKVLIT 334 (335)
Q Consensus 320 ~~~~~~~~~~k~vi~ 334 (335)
++.+.+++..|+|+.
T Consensus 329 ~~~~~~~~~~k~vi~ 343 (343)
T cd08235 329 FELAADGKSLKIVIT 343 (343)
T ss_pred HHHHhCCCcEEEEeC
Confidence 999988773388863
No 54
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.8e-35 Score=268.79 Aligned_cols=264 Identities=19% Similarity=0.253 Sum_probs=207.4
Q ss_pred EEEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822 5 VTLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81 (335)
Q Consensus 5 ~d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~ 81 (335)
.|++.++|.++. ..+|.++| ||+ +|+|+++|+++ .|++||+|++. |..|.+|.. |
T Consensus 41 ~D~~~~~G~~~~~~~~~~P~i~G-hE~-~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~--------------~- 98 (308)
T TIGR01202 41 TEKLFWNGLMPPFPGMGYPLVPG-YES-VGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVR--------------G- 98 (308)
T ss_pred chhHHhcCCCCCCCCCCCCccCc-cee-EEEEEEecCCC-CCCCCCEEEEe----Ccccccccc--------------c-
Confidence 466777887754 25799999 999 99999999998 69999999873 223333210 0
Q ss_pred ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822 82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT 161 (335)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~ 161 (335)
.. |+|+||+.+|++.++++|++++++. +++. ...|||+++.+ . ..+++++||+|+|+
T Consensus 99 -~~------------------G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~ 155 (308)
T TIGR01202 99 -LF------------------GGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGT 155 (308)
T ss_pred -cC------------------CcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCH
Confidence 11 3899999999999999999999864 4444 57899998744 3 34688999999999
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
+|++++|+|+++|++.|++++.++++++.++++ .++++.+ . .+.++|+||||+|+...++.+++
T Consensus 156 vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~----------~~~g~Dvvid~~G~~~~~~~~~~ 219 (308)
T TIGR01202 156 LGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D----------PRRDYRAIYDASGDPSLIDTLVR 219 (308)
T ss_pred HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c----------cCCCCCEEEECCCCHHHHHHHHH
Confidence 999999999999996677788877777766543 4455432 1 23479999999999767899999
Q ss_pred hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+++++ |+++.+|.... ..+++...++.+++++.++... ..++++.++++++++++++.++++++|||+|+++|++
T Consensus 220 ~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~ 294 (308)
T TIGR01202 220 RLAKG-GEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYM 294 (308)
T ss_pred hhhcC-cEEEEEeecCC-CcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHH
Confidence 99998 99999997653 4556666677788888876532 2467999999999999999888999999999999999
Q ss_pred HhcCCC-eeeEEEe
Q 019822 322 LLKQPD-CVKVLIT 334 (335)
Q Consensus 322 ~~~~~~-~~k~vi~ 334 (335)
.+.+++ ..|++++
T Consensus 295 ~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 295 TAFSDPDCLKMILD 308 (308)
T ss_pred HHhcCcCceEEEeC
Confidence 876654 4698874
No 55
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.2e-34 Score=270.75 Aligned_cols=283 Identities=19% Similarity=0.205 Sum_probs=235.9
Q ss_pred cccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCceeeccc
Q 019822 22 VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIF 100 (335)
Q Consensus 22 v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~ 100 (335)
++| ||+ +|+|+++|++++.|++||+|++.....|+.|+.|+.|.++.|..... +|.. .+
T Consensus 80 v~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~---------------- 139 (398)
T TIGR01751 80 IIG-SDA-SGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYETNF---------------- 139 (398)
T ss_pred ecc-cce-EEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--ccccCCC----------------
Confidence 899 999 99999999999999999999999999999999999999999976433 2321 22
Q ss_pred ccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH--hcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822 101 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 101 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~ 177 (335)
|+|++|+.++++.++++|+++++++++.+.+.+.|||+++.. ..++.++++|||+|+ |.+|++++++|+++|+ +
T Consensus 140 --g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~ 216 (398)
T TIGR01751 140 --GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-N 216 (398)
T ss_pred --ccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-e
Confidence 389999999999999999999999999999999999998755 467889999999997 9999999999999999 8
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCC-------------------chhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGMGVDYCFECTGVPSLLSE 238 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~ 238 (335)
++++++++++.+.++++|++.++++++.+ ...+.+.+.++++++++|++|||+|.. .+..
T Consensus 217 vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~ 295 (398)
T TIGR01751 217 PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPT 295 (398)
T ss_pred EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHH
Confidence 88888899999999999999999875410 012556677778777999999999975 7889
Q ss_pred HHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822 239 ALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 318 (335)
Q Consensus 239 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e 318 (335)
++++++++ |+++.+|.......+++...+..++.++.++.++. ..++..++++++++++... ++++++++++++
T Consensus 296 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~ 369 (398)
T TIGR01751 296 SVFVCRRG-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPT--LSKVYPLEEIGQ 369 (398)
T ss_pred HHHhhccC-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccc--eeeEEcHHHHHH
Confidence 99999997 99999987654334455555556777777765443 3457889999999987643 678999999999
Q ss_pred HHHHhcCCCee-eEEEe
Q 019822 319 AIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 319 a~~~~~~~~~~-k~vi~ 334 (335)
+|+.+.+++.. |+++.
T Consensus 370 a~~~~~~~~~~gkvvv~ 386 (398)
T TIGR01751 370 AHQDVHRNHHQGNVAVL 386 (398)
T ss_pred HHHHHHcCCCCceEEEE
Confidence 99999877754 88775
No 56
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.2e-34 Score=262.81 Aligned_cols=294 Identities=27% Similarity=0.417 Sum_probs=246.3
Q ss_pred EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++...|.++. ..+|.++| ||+ +|+|+++|++++.+++||+|+..+..+|+.|+.|+.+..++|..... .|...+|
T Consensus 43 ~~~~~g~~~~~~~~~~~~g-~~~-~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 118 (338)
T cd08254 43 LHILDGGVPTLTKLPLTLG-HEI-AGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGM--PGLGIDG 118 (338)
T ss_pred HHHHcCCCcccCCCCEecc-ccc-cEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCc--cccccCC
Confidence 3344555542 34578999 999 99999999999999999999999999999999999999999976544 2444444
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
++++|+.++.+.++++|+++++.+++.++.++.|||+++.....+.++++|||.|+|.+|++
T Consensus 119 ------------------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~ 180 (338)
T cd08254 119 ------------------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLN 180 (338)
T ss_pred ------------------cceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHH
Confidence 89999999999999999999999999999999999999888788999999999888999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+..|+ +|+++++++++.+.++++|++++++.++ ..+...+ +.+.++++|+++||++....+..+++++++
T Consensus 181 ~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~ 255 (338)
T cd08254 181 AVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKP 255 (338)
T ss_pred HHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhc
Confidence 9999999999 8999999999999999999988888776 5555556 556666899999999877788999999999
Q ss_pred CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~ 325 (335)
+ |+++.++.... ...++...+..++.++.++... ....+..++++++++.+++. .+.+++++++++++.+.+
T Consensus 256 ~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~ 327 (338)
T cd08254 256 G-GRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHK 327 (338)
T ss_pred C-CEEEEECCCCC-CCccCHHHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHc
Confidence 8 99999987543 3445556667788888875422 24678889999999998764 468999999999999988
Q ss_pred CCee-eEEEeC
Q 019822 326 PDCV-KVLITI 335 (335)
Q Consensus 326 ~~~~-k~vi~~ 335 (335)
++.. |+++++
T Consensus 328 ~~~~~kvv~~~ 338 (338)
T cd08254 328 GKVKGRVVLVP 338 (338)
T ss_pred CCccceEEEeC
Confidence 7765 888764
No 57
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.8e-34 Score=263.69 Aligned_cols=286 Identities=23% Similarity=0.389 Sum_probs=231.2
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCceee
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLY 97 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~ 97 (335)
+|.++| ||+ +|+|+++|+++..|++||+|++.+..+|+.|+.|+.|..+.|.+..+. +.. .+
T Consensus 73 ~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~------------- 135 (364)
T PLN02702 73 EPMVIG-HEC-AGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF--ATPPVH------------- 135 (364)
T ss_pred CCcccc-cce-eEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc--CCCCCC-------------
Confidence 577899 999 999999999999999999999999999999999999999999864321 211 12
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
|+|++|+.++++.++++|++++++++++. .++.++++++ ...++.++++|||+|+|++|.+++++|+.+|+..
T Consensus 136 -----g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~ 208 (364)
T PLN02702 136 -----GSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR 208 (364)
T ss_pred -----CcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 38999999999999999999999988753 2455678776 7788999999999998999999999999999966
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh--hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI--THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~--~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
|+++++++++.+.++++|++.+++++. ...++.+.+.++ ..+.++|++||++|+...+..++++++++ |+++.+|.
T Consensus 209 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~ 286 (364)
T PLN02702 209 IVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM 286 (364)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcc
Confidence 888998999999999999988765431 014465665544 23448999999999766889999999997 99999997
Q ss_pred CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeec--hhHHHHHHHhcCCCe-eeEE
Q 019822 256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL--EEIDKAIQLLKQPDC-VKVL 332 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l--~~~~ea~~~~~~~~~-~k~v 332 (335)
... ...+....+..+++++.++... ...+..++++++++.+++.+++++.|++ +++++|++.+.+++. .|++
T Consensus 287 ~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv 361 (364)
T PLN02702 287 GHN-EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVM 361 (364)
T ss_pred CCC-CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEE
Confidence 543 3344555667788988886532 3567889999999998766667788665 799999999887765 4988
Q ss_pred EeC
Q 019822 333 ITI 335 (335)
Q Consensus 333 i~~ 335 (335)
+.+
T Consensus 362 ~~~ 364 (364)
T PLN02702 362 FNL 364 (364)
T ss_pred EeC
Confidence 853
No 58
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=7.7e-34 Score=265.02 Aligned_cols=303 Identities=25% Similarity=0.318 Sum_probs=241.1
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc----ccc
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL----NGL 81 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~----~g~ 81 (335)
|++.+.|.++ ..+|.++| ||+ +|+|+++|+++..+++||+|+..+..+|+.|+.|++|+.++|.+..... +|+
T Consensus 41 D~~~~~g~~~-~~~p~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~ 117 (375)
T cd08282 41 DLHMYRGRTG-AEPGLVLG-HEA-MGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGY 117 (375)
T ss_pred HHHHHcCCCC-CCCCceec-ccc-EEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccc
Confidence 4555566655 34688999 999 9999999999999999999999999999999999999999997632110 011
Q ss_pred ccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcc---cccccccchhhhhHHHHHhcCCCCCCEEEE
Q 019822 82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPS---DASFLSCGFTTGYGAAWKEAKVEKGSSVAV 156 (335)
Q Consensus 82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI 156 (335)
... ... .|+|++|+.++.+ .++++|++++++ .++.+.+.+.|||+++ ..+.+.++++|||
T Consensus 118 ~~~------------~~~--~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI 182 (375)
T cd08282 118 VDM------------GPY--GGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAV 182 (375)
T ss_pred ccc------------CCC--CCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEE
Confidence 000 000 1489999999976 999999999998 5677888899999988 7888999999999
Q ss_pred EcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH--
Q 019822 157 LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS-- 234 (335)
Q Consensus 157 ~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~-- 234 (335)
.|+|.+|++++|+|+++|+.+|+++++++++.+.++++|+ ..+++++ .++.+.++++++ +++|+++||+|+..
T Consensus 183 ~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~---~~~~~~i~~~~~-~~~d~v~d~~g~~~~~ 257 (375)
T cd08282 183 FGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSD---GDPVEQILGLEP-GGVDRAVDCVGYEARD 257 (375)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCc---ccHHHHHHHhhC-CCCCEEEECCCCcccc
Confidence 8889999999999999997679999999999999999998 4567765 667788888777 58999999998762
Q ss_pred ---------HHHHHHHhhccCCeEEEEEccCCCc------------cccchhHHHhhcCcEEEEeeccCCCCcCcHHHHH
Q 019822 235 ---------LLSEALETTKVGKGKVIVIGVGVDA------------MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLL 293 (335)
Q Consensus 235 ---------~~~~~~~~l~~~~G~~v~~g~~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 293 (335)
.+..++++++++ |+++.+|..... ...++...+..++..+.+... .....+..++
T Consensus 258 ~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 333 (375)
T cd08282 258 RGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLR 333 (375)
T ss_pred cccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHH
Confidence 478999999997 999988764321 133455555556776665432 1245688899
Q ss_pred HHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 294 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 294 ~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
+++.++++++..++++.++++++++|++.+.+++..|+++++
T Consensus 334 ~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 334 DLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred HHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 999999988765688999999999999999888744988864
No 59
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=4.3e-34 Score=263.05 Aligned_cols=296 Identities=24% Similarity=0.413 Sum_probs=239.8
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEE-ecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVI-PTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++...+|.++| ||+ +|+|+++|++++.|++||+|+ ......|+.|++|..+..++|.+......|....
T Consensus 40 d~~~~~g~~~~~~~p~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (337)
T cd05283 40 DLHTLRNEWGPTKYPLVPG-HEI-VGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPD 117 (337)
T ss_pred HHHHhcCCcCCCCCCcccC-cce-eeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccC
Confidence 4444556655455688999 999 999999999999999999998 4455689999999999999998764421111100
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
+ ....|+++||+.++++.++++|+++++++++.+.+.+.|||+++ +..++.++++++|.|+|.+|+
T Consensus 118 ~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~ 183 (337)
T cd05283 118 G-------------TITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGH 183 (337)
T ss_pred C-------------CcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHH
Confidence 0 01124899999999999999999999999999999999999987 446689999999988899999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++|+.+|+ +|+++++++++.+.++++|++.+++.+. .++.. +. +.++|+++||+++...+..++++++
T Consensus 184 ~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~---~~--~~~~d~v~~~~g~~~~~~~~~~~l~ 254 (337)
T cd05283 184 LAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD---PEAMK---KA--AGSLDLIIDTVSASHDLDPYLSLLK 254 (337)
T ss_pred HHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---hhhhh---hc--cCCceEEEECCCCcchHHHHHHHhc
Confidence 99999999999 9999999999999999999999888775 33322 21 3489999999998755789999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
++ |+++.+|.... ...+++..++.+++++.++.... .+++..+++++.++++++ .+ +.++++++++||+.+.
T Consensus 255 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~ 326 (337)
T cd05283 255 PG-GTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLE 326 (337)
T ss_pred CC-CEEEEEeccCC-CCccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHH
Confidence 98 99999987653 33566666667899999887543 467888999999998754 34 6899999999999999
Q ss_pred CCCee-eEEEe
Q 019822 325 QPDCV-KVLIT 334 (335)
Q Consensus 325 ~~~~~-k~vi~ 334 (335)
+++.. |+|++
T Consensus 327 ~~~~~~k~v~~ 337 (337)
T cd05283 327 KGDVRYRFVLD 337 (337)
T ss_pred cCCCcceEeeC
Confidence 88865 88874
No 60
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-33 Score=260.71 Aligned_cols=295 Identities=26% Similarity=0.379 Sum_probs=247.4
Q ss_pred EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
++.+.|.++. ...|.++| ||+ +|+|+++|++++.+++||+|+..+ ...|+.|.+|..+..++|.+... .|+...
T Consensus 43 ~~~~~g~~~~~~~~~~~~g-~e~-~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 118 (341)
T cd08297 43 LHAALGDWPVKPKLPLIGG-HEG-AGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN--SGYTVD 118 (341)
T ss_pred HHHHcCCCCcCCCCCccCC-ccc-ceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccc--cccccC
Confidence 3344455443 23466899 999 999999999999999999999776 57899999999999999988755 354444
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG 163 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG 163 (335)
| ++++|+.++++.++++|+++++.+++.++..+.|||+++.. .++.++++|||+|+ +.+|
T Consensus 119 g------------------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg 179 (341)
T cd08297 119 G------------------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLG 179 (341)
T ss_pred C------------------cceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHH
Confidence 4 89999999999999999999999999999899999998755 58899999999987 7799
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++++|+++|+ +|+++.+++++.+.++++|++.+++++. .++...+.++++++++|+++|+.++...+..+++++
T Consensus 180 ~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l 255 (341)
T cd08297 180 HLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYL 255 (341)
T ss_pred HHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHh
Confidence 999999999999 9999999999999999999999998887 678888888887779999999887766889999999
Q ss_pred ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
+++ |+++.+|.......+++...++.+++++.+.... ..++++.++++++++++++ .+ +.+++++++++++.+
T Consensus 256 ~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~ 328 (341)
T cd08297 256 RPG-GTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKM 328 (341)
T ss_pred hcC-CEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHH
Confidence 997 9999998765333356666666788888875432 2467888999999998764 24 579999999999999
Q ss_pred cCCCee-eEEEeC
Q 019822 324 KQPDCV-KVLITI 335 (335)
Q Consensus 324 ~~~~~~-k~vi~~ 335 (335)
.+++.. |++++|
T Consensus 329 ~~~~~~gkvvi~~ 341 (341)
T cd08297 329 EEGKIAGRVVVDF 341 (341)
T ss_pred HcCCccceEEEeC
Confidence 887765 998875
No 61
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.5e-33 Score=259.92 Aligned_cols=284 Identities=22% Similarity=0.324 Sum_probs=233.6
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|++|..+.+++|.+... .+...+|
T Consensus 56 ~~p~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------ 119 (341)
T PRK05396 56 PVPMVVG-HEF-VGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVNRPG------------ 119 (341)
T ss_pred CCCcccc-eee-EEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeecCCC------------
Confidence 4677999 999 99999999999999999999999999999999999999999987533 2333333
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
+|++|+.++.+.++++|+++++++++.+ ..+.++++++.. ...++++|+|.|+|.+|++++++|+++|+++
T Consensus 120 ------~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~ 190 (341)
T PRK05396 120 ------AFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH 190 (341)
T ss_pred ------cceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence 8999999999999999999999888754 466666665532 3458999999888999999999999999866
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+++++++++.++++++|+++++++++ .++.+.++++++++++|++|||+|+...+...+++++++ |+++.+|...
T Consensus 191 v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 266 (341)
T PRK05396 191 VVITDVNEYRLELARKMGATRAVNVAK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPP 266 (341)
T ss_pred EEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence 888888999999999999999998887 678888888887779999999999877889999999998 9999998765
Q ss_pred CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEe
Q 019822 258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 334 (335)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~ 334 (335)
. ..+++...+.++++++.++.... ....+..+++++.++ +++.+.+.+.++++++++|++.+.+++..|++++
T Consensus 267 ~-~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~ 339 (341)
T PRK05396 267 G-DMAIDWNKVIFKGLTIKGIYGRE--MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILD 339 (341)
T ss_pred C-CCcccHHHHhhcceEEEEEEccC--ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEe
Confidence 3 33444566667888888764221 224456788888888 5455557789999999999999887764588875
No 62
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=9.7e-34 Score=258.68 Aligned_cols=279 Identities=21% Similarity=0.300 Sum_probs=229.9
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LD 84 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~ 84 (335)
|++.+.|.++ +|.++| ||+ +|+|+++|++ +++||+|...++.+|+.|.+|..|..+.|...+. .++. .+
T Consensus 40 d~~~~~g~~~---~~~~~G-~e~-~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 109 (319)
T cd08242 40 DLEIYKGYYP---FPGVPG-HEF-VGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV--LGIVDRD 109 (319)
T ss_pred cHHHHcCCCC---CCCccC-ceE-EEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc--cCccCCC
Confidence 3344445443 577999 999 9999999997 7899999999999999999999999999987654 2332 23
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
| ++++|+.++.+.++++|++++.++++.+ ..+.++|. +.+..++.++++|||+|+|.+|+
T Consensus 110 g------------------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~ 169 (319)
T cd08242 110 G------------------AFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGL 169 (319)
T ss_pred C------------------ceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHH
Confidence 3 8999999999999999999999888764 35556665 45778899999999999899999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++|+|+.+|+ +|+++++++++.++++++|++.++++++ . +.++++|+++|++|+...+..++++++
T Consensus 170 ~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~ 236 (319)
T cd08242 170 LIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVR 236 (319)
T ss_pred HHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhh
Confidence 99999999999 7999999999999999999988877654 1 345589999999998667899999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
++ |+++..+... ....++...+..++.++.++.. ..++.++++++++++++.+++++.|+++++++||+.+.
T Consensus 237 ~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~ 308 (319)
T cd08242 237 PR-GTVVLKSTYA-GPASFDLTKAVVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAA 308 (319)
T ss_pred cC-CEEEEEcccC-CCCccCHHHheecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHh
Confidence 97 9999876544 3455666666678888887643 23788999999999876666889999999999999998
Q ss_pred CCCeeeEEEeC
Q 019822 325 QPDCVKVLITI 335 (335)
Q Consensus 325 ~~~~~k~vi~~ 335 (335)
++...|++++.
T Consensus 309 ~~~~~k~vi~~ 319 (319)
T cd08242 309 EPGALKVLLRP 319 (319)
T ss_pred cCCceEEEeCC
Confidence 77656998863
No 63
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.7e-33 Score=259.38 Aligned_cols=277 Identities=21% Similarity=0.343 Sum_probs=221.8
Q ss_pred CccccccccccceEEEEEeCCCCCc-ccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 96 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~ 96 (335)
.+|.++| ||+ +|+|+++|++++. |++||+|+..+...|+.|+.|..|... ..
T Consensus 62 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------------~~------------- 114 (341)
T cd08262 62 GADIVLG-HEF-CGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------------EA------------- 114 (341)
T ss_pred CCCcccc-cce-eEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------------CC-------------
Confidence 3578899 999 9999999999987 999999999999999999999432110 01
Q ss_pred ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822 97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA 176 (335)
Q Consensus 97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~ 176 (335)
.|+|++|+.++++.++++|+++++++++ ++.++++||+++ ..+++.++++|||+|+|.+|.+++|+|+.+|+.
T Consensus 115 -----~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~ 187 (341)
T cd08262 115 -----PGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVG 187 (341)
T ss_pred -----CCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 1389999999999999999999999877 556888999984 788999999999998899999999999999996
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
.++++++++++.+.++++|++++++++..... .+. .+.+.+.++++|+++|++|+...+..++++++++ |+++.+|.
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~ 265 (341)
T cd08262 188 PIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265 (341)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECC
Confidence 68888889999999999999889987751000 222 3445556668999999999854778899999997 99999987
Q ss_pred CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEe
Q 019822 256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~ 334 (335)
... ...+.......+++.+.+.... ..+.+..++++++++.+.+.+++++.++++++++|++.+.+++.. |++++
T Consensus 266 ~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 266 CME-SDNIEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCC-CCccCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 643 1222333334477777754322 235788899999999988766677899999999999999887754 88864
No 64
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.5e-33 Score=259.04 Aligned_cols=297 Identities=24% Similarity=0.339 Sum_probs=245.7
Q ss_pred EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++. ..+|.++| ||+ +|+|+++|++++.|++||+|++.+...|+.|++|.++.++.|..... +|....
T Consensus 43 d~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~ 118 (342)
T cd08266 43 DLWVRRGMPGIKLPLPHILG-SDG-AGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEHVD 118 (342)
T ss_pred HHHHhcCCCCCCCCCCeecc-cce-EEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccc--cccccC
Confidence 34444554432 24578999 999 99999999999999999999999999999999999999999987543 344333
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG 163 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG 163 (335)
| ++++|+.++.+.++++|+++++++++++++.+.+|++++.+..++.++++++|+|+ +.+|
T Consensus 119 g------------------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG 180 (342)
T cd08266 119 G------------------GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG 180 (342)
T ss_pred c------------------ceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHH
Confidence 3 89999999999999999999999999998899999999888888999999999987 7999
Q ss_pred HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
++++++++..|+ +|+.+++++++.+.+++++.+.+++... .++...+.+.+.++++|+++|++|.. .+...++++
T Consensus 181 ~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l 255 (342)
T cd08266 181 SAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSL 255 (342)
T ss_pred HHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHh
Confidence 999999999999 8999999999999998888877787765 66777777777666899999999986 778999999
Q ss_pred ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
+++ |+++.++........++....+.+++++.+..... ...+..++++++++.+.+ ++++.|+++++++|++.+
T Consensus 256 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~ 329 (342)
T cd08266 256 ARG-GRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRL 329 (342)
T ss_pred hcC-CEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHH
Confidence 997 99999987654333445444455888888775432 356888999999998654 367889999999999998
Q ss_pred cCCCee-eEEEeC
Q 019822 324 KQPDCV-KVLITI 335 (335)
Q Consensus 324 ~~~~~~-k~vi~~ 335 (335)
.+++.. |+++++
T Consensus 330 ~~~~~~~kvv~~~ 342 (342)
T cd08266 330 ESREQFGKIVLTP 342 (342)
T ss_pred HhCCCCceEEEeC
Confidence 876654 888763
No 65
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1e-33 Score=260.09 Aligned_cols=289 Identities=29% Similarity=0.398 Sum_probs=237.3
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...|.++...+|.++| ||+ +|+|+++|+++..+++||+|++.+..+|+.|.+|..|.++.|..... +|...+|
T Consensus 41 d~~~~~g~~~~~~~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 116 (334)
T PRK13771 41 DLLQLQGFYPRMKYPVILG-HEV-VGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLG--YGEELDG 116 (334)
T ss_pred hHHHhcCCCCCCCCCeecc-ccc-eEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccc--cccccCc
Confidence 4455566666556678999 999 99999999999889999999999888999999999999999988655 3433344
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
++++|+.++.+.++++|+++++.+++.+++.+.+||+++.+. .+.++++|||+|+ |.+|+
T Consensus 117 ------------------~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~ 177 (334)
T PRK13771 117 ------------------FFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGI 177 (334)
T ss_pred ------------------eeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHH
Confidence 899999999999999999999999999999999999988554 8899999999987 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++|+.+|+ +|+++++++++.+.++++ ++++++.++ +...++++ + ++|+++||+|+. .+..++++++
T Consensus 178 ~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~v~~~--~-~~d~~ld~~g~~-~~~~~~~~l~ 246 (334)
T PRK13771 178 HAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGSK-----FSEEVKKI--G-GADIVIETVGTP-TLEESLRSLN 246 (334)
T ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCchh-----HHHHHHhc--C-CCcEEEEcCChH-HHHHHHHHHh
Confidence 99999999999 899999999999999888 776665542 45556654 3 699999999986 6789999999
Q ss_pred cCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822 245 VGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 245 ~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~ 323 (335)
++ |+++.+|.... ...++.......+++++.+... ...+++..+++++.++.++. .+++.++++++++||+.+
T Consensus 247 ~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~ 320 (334)
T PRK13771 247 MG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEEL 320 (334)
T ss_pred cC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHH
Confidence 97 99999997653 2212333334457888887632 23567889999999998753 467899999999999999
Q ss_pred cCCCee-eEEEe
Q 019822 324 KQPDCV-KVLIT 334 (335)
Q Consensus 324 ~~~~~~-k~vi~ 334 (335)
.+++.. |+++.
T Consensus 321 ~~~~~~~kvv~~ 332 (334)
T PRK13771 321 KDKSRIGKILVK 332 (334)
T ss_pred HcCCCcceEEEe
Confidence 876654 88875
No 66
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.3e-33 Score=257.17 Aligned_cols=291 Identities=24% Similarity=0.357 Sum_probs=236.1
Q ss_pred EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++.+.|.++. ..|.++| ||+ +|+|+++|++++.|++||+|++.+ ...|+.|+.|..+..+.|.+... .|+..+|
T Consensus 42 ~~~~~g~~~~-~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 116 (338)
T PRK09422 42 LHVANGDFGD-KTGRILG-HEG-IGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYTVDG 116 (338)
T ss_pred HHHHcCCCCC-CCCccCC-ccc-ceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc--cCccccC
Confidence 3344455443 2367899 999 999999999999999999998654 56899999999999999987643 3444444
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
++++|+.++.+.++++|+++++++++.++..+.|||+++ +.+++.++++|||+|+|++|++
T Consensus 117 ------------------~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~ 177 (338)
T PRK09422 117 ------------------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNL 177 (338)
T ss_pred ------------------cceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHH
Confidence 899999999999999999999999999999999999987 7788999999999999999999
Q ss_pred HHHHHHH-cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 166 AVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 166 ai~la~~-~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
++++|+. .|+ +|+++++++++++.++++|++.+++++. ..++...+++.++ ++|+++++.++...+..++++++
T Consensus 178 ~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~ 252 (338)
T PRK09422 178 ALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR--VEDVAKIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVR 252 (338)
T ss_pred HHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc--cccHHHHHHHhcC--CCcEEEEeCCCHHHHHHHHHhcc
Confidence 9999998 599 9999999999999999999999988753 1346667777665 68855554455558899999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
.+ |+++.+|.... ..+++...+..++..+.++... ..+++..++++++++.++. .++ .++++++++||+.+.
T Consensus 253 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~ 324 (338)
T PRK09422 253 AG-GRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVG---TRQDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEME 324 (338)
T ss_pred CC-CEEEEEeeCCC-CceecHHHHhhcCcEEEEecCC---CHHHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHH
Confidence 97 99999987543 3445555666678888775432 2457888999999998754 354 689999999999998
Q ss_pred CCCee-eEEEe
Q 019822 325 QPDCV-KVLIT 334 (335)
Q Consensus 325 ~~~~~-k~vi~ 334 (335)
+++.. |++++
T Consensus 325 ~~~~~gkvvv~ 335 (338)
T PRK09422 325 QGKIQGRMVID 335 (338)
T ss_pred cCCccceEEEe
Confidence 87765 88775
No 67
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-33 Score=260.43 Aligned_cols=258 Identities=21% Similarity=0.236 Sum_probs=213.8
Q ss_pred Ccccccccc--ccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822 18 LFILVFSGT--KVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK 95 (335)
Q Consensus 18 ~~p~v~G~~--e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~ 95 (335)
.+|.++| + |+ +|+|+.+|++++.|++||+|+..
T Consensus 71 ~~p~~~G-~~~~~-~G~v~~vg~~v~~~~~Gd~V~~~------------------------------------------- 105 (348)
T PLN03154 71 LPPFVPG-QRIEG-FGVSKVVDSDDPNFKPGDLISGI------------------------------------------- 105 (348)
T ss_pred CCCcCCC-CeeEe-eEEEEEEecCCCCCCCCCEEEec-------------------------------------------
Confidence 3588999 8 88 99999999999999999999531
Q ss_pred eecccccccceeeEEecccc--eE--EcCCCCCcc-cccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHH
Q 019822 96 LYHIFSCSTWSEYMVIDANY--VV--KVDPSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDG 169 (335)
Q Consensus 96 ~~~~~~~g~~~~~~~v~~~~--~~--~lp~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~l 169 (335)
|+|+||+.++++. +. ++|++++++ +++++++++.|||+++.+..+++++++|||+|+ |++|++++|+
T Consensus 106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql 178 (348)
T PLN03154 106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL 178 (348)
T ss_pred -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence 2799999998753 54 459999986 688899999999999988889999999999987 9999999999
Q ss_pred HHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822 170 ARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 248 (335)
Q Consensus 170 a~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G 248 (335)
|+.+|+ +|+++++++++.+.++ ++|+++++++++ ..++.+.+++.+++ ++|++||++|+. .+..++++++++ |
T Consensus 179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~-gvD~v~d~vG~~-~~~~~~~~l~~~-G 252 (348)
T PLN03154 179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPE-GIDIYFDNVGGD-MLDAALLNMKIH-G 252 (348)
T ss_pred HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCC-CcEEEEECCCHH-HHHHHHHHhccC-C
Confidence 999999 8999999999999987 799999999874 13677778877764 899999999986 789999999998 9
Q ss_pred EEEEEccCCCccc-----cchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 249 KVIVIGVGVDAMV-----PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 249 ~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+++.+|...+... .++...++.+++++.|+....+. ..+.+.++++++++|++++. +.++|+|+++++|++
T Consensus 253 ~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~ 330 (348)
T PLN03154 253 RIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALV 330 (348)
T ss_pred EEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHH
Confidence 9999997653221 12455677789999988654321 12457789999999998754 667899999999999
Q ss_pred HhcCCCee-eEEEeC
Q 019822 322 LLKQPDCV-KVLITI 335 (335)
Q Consensus 322 ~~~~~~~~-k~vi~~ 335 (335)
.+.+++.. |+|+++
T Consensus 331 ~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 331 GLFSGKNVGKQVIRV 345 (348)
T ss_pred HHHcCCCCceEEEEe
Confidence 99988865 999864
No 68
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=4.5e-33 Score=256.44 Aligned_cols=285 Identities=25% Similarity=0.358 Sum_probs=229.7
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCcee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKL 96 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~ 96 (335)
.+|.++| ||+ +|+|+++|+++..|++||+|+..+..+|+.|++|.-|+.+.|.+..+ ++.. .+.
T Consensus 52 ~~p~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~----------- 116 (339)
T cd08232 52 REPMVLG-HEV-SGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRFP----------- 116 (339)
T ss_pred cCCeecC-ccc-eEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccc--eeeccccC-----------
Confidence 3577999 999 99999999999999999999999999999999999999999997543 1211 000
Q ss_pred ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822 97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA 176 (335)
Q Consensus 97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~ 176 (335)
...|+|++|+.++++.++++|+++++++++. ..+++++|+++.+.... ++++|||.|+|.+|.+++++|+.+|+.
T Consensus 117 ---~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~ 191 (339)
T cd08232 117 ---HVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAA 191 (339)
T ss_pred ---CCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 0124899999999999999999999999876 46888999987555555 899999998899999999999999986
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh-CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~-~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+|+++++++++.+.++++|+++++++++ .++ .++. .+.++|+++|++++...++..+++++++ |+++.++.
T Consensus 192 ~v~~~~~s~~~~~~~~~~g~~~vi~~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~ 263 (339)
T cd08232 192 EIVATDLADAPLAVARAMGADETVNLAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGM 263 (339)
T ss_pred EEEEECCCHHHHHHHHHcCCCEEEcCCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEec
Confidence 7999998899999889999999998875 332 2222 2336999999999765789999999997 99999986
Q ss_pred CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCe-eeEEEe
Q 019822 256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT 334 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~-~k~vi~ 334 (335)
.. .....+...++.+++.+.+... ....+..++++++++.+++.+.+.++++++++++|++.+.+++. .|++++
T Consensus 264 ~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 338 (339)
T cd08232 264 LG-GPVPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLS 338 (339)
T ss_pred CC-CCccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEe
Confidence 54 2333444444557778776642 23568889999999998776667789999999999999887665 499886
Q ss_pred C
Q 019822 335 I 335 (335)
Q Consensus 335 ~ 335 (335)
+
T Consensus 339 ~ 339 (339)
T cd08232 339 F 339 (339)
T ss_pred C
Confidence 4
No 69
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.6e-33 Score=257.45 Aligned_cols=298 Identities=26% Similarity=0.406 Sum_probs=240.3
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++ ...|.++| +|+ +|+|+++|+++..|++||+|+..+...|+.|++|..++++.|..... +|....|
T Consensus 40 d~~~~~~~~~-~~~~~~~g-~~~-~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 114 (343)
T cd08236 40 DIPRYLGTGA-YHPPLVLG-HEF-SGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSRRDG 114 (343)
T ss_pred chHhhcCCCC-CCCCcccC-cce-EEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce--EecccCC
Confidence 3333444432 23577899 999 99999999999999999999999888999999999999999987543 3433333
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
+|++|+.++++.++++|+++++++++++ ..+++||+++. ...+.++++|||+|+|.+|.+
T Consensus 115 ------------------~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~ 174 (343)
T cd08236 115 ------------------AFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLL 174 (343)
T ss_pred ------------------cccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHH
Confidence 8999999999999999999999998887 57889999885 788999999999988999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+.+|+..|+++++++++.+.++++|++.+++++. .. ...+++..+++++|+++||+|....+..+++++++
T Consensus 175 ~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~ 250 (343)
T cd08236 175 AIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARP 250 (343)
T ss_pred HHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhc
Confidence 999999999944999999999999999999999998876 55 66777777777899999999876678999999999
Q ss_pred CCeEEEEEccCCCc-c-ccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 246 GKGKVIVIGVGVDA-M-VPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 246 ~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+ |+++.+|..... . ...+...++.++.++.++...... ..+.+..++++++++.+.+.+.+.+.+++++++++++
T Consensus 251 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 329 (343)
T cd08236 251 G-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFE 329 (343)
T ss_pred C-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHH
Confidence 7 999999865431 1 122333445678888887653321 1356788899999999764444667899999999999
Q ss_pred HhcC-CCee-eEEE
Q 019822 322 LLKQ-PDCV-KVLI 333 (335)
Q Consensus 322 ~~~~-~~~~-k~vi 333 (335)
.+.+ +... |+|+
T Consensus 330 ~~~~~~~~~~k~v~ 343 (343)
T cd08236 330 RLADREEFSGKVLL 343 (343)
T ss_pred HHHcCCCCeeEEeC
Confidence 9987 4443 7764
No 70
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.1e-33 Score=258.86 Aligned_cols=269 Identities=17% Similarity=0.153 Sum_probs=217.4
Q ss_pred EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCc-ccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
|++.+.|.++. ..+|.++| ||+ +|+|+++|+++.+ |++||+|+.... .
T Consensus 46 d~~~~~g~~~~~~~~p~v~G-~e~-~G~V~~vG~~v~~~~~vGd~V~~~~~----------------------------~ 95 (324)
T cd08291 46 DLGFLKGQYGSTKALPVPPG-FEG-SGTVVAAGGGPLAQSLIGKRVAFLAG----------------------------S 95 (324)
T ss_pred HHHHhcCcCCCCCCCCcCCC-cce-EEEEEEECCCccccCCCCCEEEecCC----------------------------C
Confidence 44455566553 35789999 999 9999999999986 999999975311 0
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE-c-CCH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-G-LGT 161 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~-G-~g~ 161 (335)
+ |+|++|+.+|++.++++|+++++++++++++.+.|||. +.+.... +++.++|+ | +|+
T Consensus 96 ~------------------g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~ 155 (324)
T cd08291 96 Y------------------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASA 155 (324)
T ss_pred C------------------CcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccH
Confidence 1 38999999999999999999999999988888889975 4455555 55566665 4 599
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
+|++++|+|+.+|+ +|+++++++++.+.++++|+++++++++ .++.+.++++++++++|++||++|+. .....++
T Consensus 156 vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~ 230 (324)
T cd08291 156 LGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGG-LTGQILL 230 (324)
T ss_pred HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHH
Confidence 99999999999999 8999999999999999999999999887 77888899988888999999999987 5678899
Q ss_pred hhccCCeEEEEEccCCCccc-cchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 242 TTKVGKGKVIVIGVGVDAMV-PLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
+++++ |+++.+|....... .++...+..+++++.++....+.. .+.++.++++++ +.+ .+.++++|+|+|++
T Consensus 231 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~ 306 (324)
T cd08291 231 AMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTL 306 (324)
T ss_pred hhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHH
Confidence 99997 99999997654222 255556667899999887654421 235677788887 664 45688999999999
Q ss_pred HHHHHhcCCCe-eeEEE
Q 019822 318 KAIQLLKQPDC-VKVLI 333 (335)
Q Consensus 318 ea~~~~~~~~~-~k~vi 333 (335)
+|++.+.+++. +|+++
T Consensus 307 ~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 307 EAIAFYSKNMSTGKKLL 323 (324)
T ss_pred HHHHHHHhCCCCCeEEe
Confidence 99999988765 48886
No 71
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=6.3e-33 Score=255.73 Aligned_cols=285 Identities=28% Similarity=0.430 Sum_probs=232.3
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+.+|+++..+++||+|+..+.++|+.|+.|..|.+++|....+ .|....
T Consensus 56 ~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------- 118 (341)
T cd05281 56 KPPLIFG-HEF-AGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI--LGVDTD------------- 118 (341)
T ss_pred CCCcccc-cce-EEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccce--EeccCC-------------
Confidence 3567899 999 99999999999999999999999999999999999999999975322 333223
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
|+|++|+.++++.++++|++++++.+ ++..++.++++++. ....++++|||.|+|.+|++++++|+.+|+.+
T Consensus 119 -----g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~ 190 (341)
T cd05281 119 -----GCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL 190 (341)
T ss_pred -----CcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 38999999999999999999998555 45557788888764 45578999999988999999999999999866
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+++++++++.+.++++|++++++++. .++. .++++++++++|++||++|+...+..++++++++ |+++.+|...
T Consensus 191 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 265 (341)
T cd05281 191 VIASDPNPYRLELAKKMGADVVINPRE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPP 265 (341)
T ss_pred EEEECCCHHHHHHHHHhCcceeeCccc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence 888888899999999999999988876 6677 7888888789999999998876789999999998 9999998654
Q ss_pred CccccchhH-HHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 258 DAMVPLNVI-ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 258 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
. ...++.. .+..+++.+.+.... ...+.+..+++++.++.+.+.+++++.++++++++||+.+.+++..|++++.
T Consensus 266 ~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 266 G-PVDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred C-CcccccchhhhccceEEEEEecC--CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 3 2222222 245577777765421 1235677889999999987666677889999999999999887744988763
No 72
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=9.2e-33 Score=254.54 Aligned_cols=286 Identities=27% Similarity=0.382 Sum_probs=235.3
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|.+|..+..+.|.+... +|+...|
T Consensus 54 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------ 117 (340)
T TIGR00692 54 KPPQVVG-HEV-AGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--FGVDTDG------------ 117 (340)
T ss_pred CCCcccc-cce-EEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcce--EeecCCC------------
Confidence 3567899 999 99999999999999999999999999999999999999999998644 2333333
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 177 (335)
++++|+.++++.++++|++++++.+ +++.++.++++++ .....++++|+|.|+|.+|.+++++|+.+|++.
T Consensus 118 ------~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~ 188 (340)
T TIGR00692 118 ------CFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP 188 (340)
T ss_pred ------cceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 8999999999999999999998655 4566888888876 345678999999888999999999999999944
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+++++++++.+.++++|++.+++++. .++.+.+.++++++++|+++|++++...+...+++++++ |+++.+|...
T Consensus 189 v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~ 264 (340)
T TIGR00692 189 VIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPP 264 (340)
T ss_pred EEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCC
Confidence 889988899999999999988888876 678888888888789999999998776789999999997 9999998754
Q ss_pred CccccchhH-HHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822 258 DAMVPLNVI-ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335 (335)
Q Consensus 258 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~ 335 (335)
. ..+++.. .+..+++.+.+... . ...+.+..++++++++++++.+++++.+++++++++++.+.+++..|+++++
T Consensus 265 ~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 265 G-KVTIDFTNKVIFKGLTIYGITG-R-HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred C-CcccchhhhhhhcceEEEEEec-C-CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 2 2233333 45557777776541 1 1234577889999999987655577899999999999998876656888864
No 73
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4e-33 Score=254.95 Aligned_cols=270 Identities=19% Similarity=0.206 Sum_probs=224.6
Q ss_pred EeEeecCCC-CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDS-QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~-~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++.+.|.++ ...+|.++| ||+ +|+|+++|++++.|++||+|+... .+
T Consensus 45 ~~~~~g~~~~~~~~p~~~G-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~-----------------------------~~- 92 (324)
T cd08292 45 LWTIRGTYGYKPELPAIGG-SEA-VGVVDAVGEGVKGLQVGQRVAVAP-----------------------------VH- 92 (324)
T ss_pred HHHhcCcCCCCCCCCCCCC-cce-EEEEEEeCCCCCCCCCCCEEEecc-----------------------------CC-
Confidence 344456554 245688999 999 999999999999999999997532 11
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
|+|++|+.+++..++++|+++++++++++++.+.++|+++ ...++.++++|||+|+ |.+|+
T Consensus 93 -----------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~ 154 (324)
T cd08292 93 -----------------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGK 154 (324)
T ss_pred -----------------CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHH
Confidence 3899999999999999999999999999988889999976 5588999999999986 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++|+.+|+ +++++..++++.+.++++|+++++++++ .++...++++++++++|++||++|+. ....++++++
T Consensus 155 ~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~ 229 (324)
T cd08292 155 LVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLG 229 (324)
T ss_pred HHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhc
Confidence 99999999999 8999988899999988899999998887 77888899999988999999999987 6789999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
++ |+++.+|.......++++.....+++++.++....+.. ...+..+++++.++.+++. +.+.|+++++.
T Consensus 230 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~ 306 (324)
T cd08292 230 EG-GTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAA 306 (324)
T ss_pred CC-cEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHH
Confidence 97 99999987643344556555666899999887543211 2357789999999998754 46789999999
Q ss_pred HHHHHhcCCCee-eEEEe
Q 019822 318 KAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 318 ea~~~~~~~~~~-k~vi~ 334 (335)
+|++.+.+++.. |++++
T Consensus 307 ~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 307 KAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHcCCCCceEEeC
Confidence 999998876554 87763
No 74
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.9e-33 Score=238.72 Aligned_cols=268 Identities=22% Similarity=0.221 Sum_probs=221.5
Q ss_pred CeE-EEEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccc
Q 019822 2 PVF-VTLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 79 (335)
Q Consensus 2 ~~~-~d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~ 79 (335)
||. .|+...+|.||. +.+|.|-| +|+ +|+|+.+|+++++|++||+|+....
T Consensus 58 PINPsDIN~IQGvYpvrP~~PAVgG-nEG-v~eVv~vGs~vkgfk~Gd~VIp~~a------------------------- 110 (354)
T KOG0025|consen 58 PINPSDINQIQGVYPVRPELPAVGG-NEG-VGEVVAVGSNVKGFKPGDWVIPLSA------------------------- 110 (354)
T ss_pred CCChHHhhhhccccCCCCCCCcccC-Ccc-eEEEEEecCCcCccCCCCeEeecCC-------------------------
Confidence 444 588889999998 68998888 999 9999999999999999999985432
Q ss_pred ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC
Q 019822 80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL 159 (335)
Q Consensus 80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~ 159 (335)
++|+|++|.+++++.++++++.++++.||++..+.+|||.+|.+...+.+|++|+-.|+
T Consensus 111 ---------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNga 169 (354)
T KOG0025|consen 111 ---------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGA 169 (354)
T ss_pred ---------------------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCc
Confidence 24699999999999999999999999999999999999999988899999999999998
Q ss_pred -CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822 160 -GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 234 (335)
Q Consensus 160 -g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~ 234 (335)
+.||.+.+|+|+++|+ +-+.+.|+....+. ++.+||++|+...++....+ .+......++.+.+||+|+.
T Consensus 170 nS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~---~k~~~~~~~prLalNcVGGk- 244 (354)
T KOG0025|consen 170 NSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKM---KKFKGDNPRPRLALNCVGGK- 244 (354)
T ss_pred ccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhh---hhhhccCCCceEEEeccCch-
Confidence 9999999999999999 66666666655554 46799999996654222222 22222344789999999998
Q ss_pred HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCc--------CcHHHHHHHHhCCCCCCCCc
Q 019822 235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK--------SDLPTLLDKCKNKEFKLHQL 306 (335)
Q Consensus 235 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~ 306 (335)
....+.+.|.++ |+++.+|.++..++.++...++++++.++|+.+..+... +.+.++.++++.|++..+
T Consensus 245 sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~-- 321 (354)
T KOG0025|consen 245 SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP-- 321 (354)
T ss_pred hHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--
Confidence 557899999998 999999998888888999999999999999998888432 224578899999998766
Q ss_pred eeEEeechhHHHHHHHhcC
Q 019822 307 LTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 307 ~~~~~~l~~~~ea~~~~~~ 325 (335)
-.+..+|++...|++...+
T Consensus 322 ~~e~v~L~~~~tald~~L~ 340 (354)
T KOG0025|consen 322 NCEKVPLADHKTALDAALS 340 (354)
T ss_pred cceeeechhhhHHHHHHHH
Confidence 3456789888888875543
No 75
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-32 Score=252.14 Aligned_cols=290 Identities=29% Similarity=0.435 Sum_probs=237.2
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++.+.|.++....|.++| ||+ +|+|+++|++++.|++||+|+......|+.|++|..+.++.|.+... +|...+
T Consensus 41 d~~~~~g~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 115 (332)
T cd08259 41 DLLFWKGFFPRGKYPLILG-HEI-VGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAE--YGEEVD- 115 (332)
T ss_pred hhHHhcCCCCCCCCCeecc-ccc-eEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccc--cccccC-
Confidence 5555667666555678999 999 99999999999999999999999988999999999999999987522 343333
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
|++++|+.++...++++|+++++++++.+++++.+||+++.. ..+.+++++||+|+ |.+|+
T Consensus 116 -----------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~ 177 (332)
T cd08259 116 -----------------GGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGI 177 (332)
T ss_pred -----------------CeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHH
Confidence 389999999999999999999999999999999999999866 88999999999987 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++++..|+ +|+++++++++.+.+++++.+.+++.+ . +.+.+.+.. ++|+++|++|.. ....++++++
T Consensus 178 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~---~~d~v~~~~g~~-~~~~~~~~~~ 247 (332)
T cd08259 178 HAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----K-FSEDVKKLG---GADVVIELVGSP-TIEESLRSLN 247 (332)
T ss_pred HHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----H-HHHHHHhcc---CCCEEEECCChH-HHHHHHHHhh
Confidence 99999999999 899999999999999889988777554 2 555565543 799999999987 5788999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
++ |+++.++........+.......++..+.++.. ....++..+++++.++.+++ .+++.++++++++||+.+.
T Consensus 248 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~ 321 (332)
T cd08259 248 KG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLK 321 (332)
T ss_pred cC-CEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHH
Confidence 97 999999876542222233333347777776531 13456888999999998654 3678999999999999998
Q ss_pred CCCee-eEEEe
Q 019822 325 QPDCV-KVLIT 334 (335)
Q Consensus 325 ~~~~~-k~vi~ 334 (335)
+++.. |++++
T Consensus 322 ~~~~~~kvv~~ 332 (332)
T cd08259 322 SGKVVGRIVLK 332 (332)
T ss_pred cCCcccEEEeC
Confidence 87765 87763
No 76
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-33 Score=255.60 Aligned_cols=274 Identities=22% Similarity=0.295 Sum_probs=223.8
Q ss_pred CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822 17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 96 (335)
Q Consensus 17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~ 96 (335)
..+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|..|. .|. . .|...+|
T Consensus 75 ~~~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~---~--~~~~~~g----------- 131 (350)
T cd08274 75 LSFPRIQG-ADI-VGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DID---Y--IGSERDG----------- 131 (350)
T ss_pred CCCCcccC-Ccc-eEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----ccc---c--cCCCCCc-----------
Confidence 35688999 999 99999999999999999999998888888876642 111 0 1222223
Q ss_pred ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCC
Q 019822 97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGA 175 (335)
Q Consensus 97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~ 175 (335)
++++|+.++...++++|+++++.+++++++++.|||+++ +..++.++++|||+|+ |++|++++++|+.+|+
T Consensus 132 -------~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~ 203 (350)
T cd08274 132 -------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA 203 (350)
T ss_pred -------cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC
Confidence 899999999999999999999999999999999999987 7788999999999997 9999999999999999
Q ss_pred CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+|+++++++ +.+.++++|++.+++... ..+.+ ...+.++++|++||++|+. .+..++++++++ |+++.+|.
T Consensus 204 -~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~ 274 (350)
T cd08274 204 -IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGA 274 (350)
T ss_pred -EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC-CEEEEecc
Confidence 788888665 888889999876666543 33333 4556677999999999986 789999999998 99999986
Q ss_pred CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEe
Q 019822 256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~ 334 (335)
......++++..++.+++++.++.... ...+.++++++.++++++ ++++.++++++++|++.+.+++.. |++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 275 IAGPVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred cCCccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 543225667777677899998876532 457888999999998654 366789999999999999877654 88876
Q ss_pred C
Q 019822 335 I 335 (335)
Q Consensus 335 ~ 335 (335)
+
T Consensus 350 ~ 350 (350)
T cd08274 350 P 350 (350)
T ss_pred C
Confidence 3
No 77
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.4e-32 Score=249.95 Aligned_cols=293 Identities=25% Similarity=0.364 Sum_probs=238.6
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...|.++. .+|.++| +|+ +|+|+++|++++.+++||+|+......|+.|++|..+.++.|..... .|...+|
T Consensus 40 d~~~~~g~~~~-~~p~~~g-~~~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g 114 (334)
T cd08234 40 DLHIYEGEFGA-APPLVPG-HEF-AGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA--VGVTRNG 114 (334)
T ss_pred hhHHhcCCCCC-CCCcccc-cce-EEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce--eccCCCC
Confidence 44445565543 3678999 999 99999999999999999999998888999999999999999986532 2322333
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
++++|+.++++.++++|+++++.+++.+ ..+.++++++ +.+++.++++|||+|+|.+|.+
T Consensus 115 ------------------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~ 174 (334)
T cd08234 115 ------------------GFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLL 174 (334)
T ss_pred ------------------cceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence 8999999999999999999999998776 6788899887 7889999999999988999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+..|+++|+++++++++.+.++++|++.+++.+. .++... +.+.++++|+++|+++....+...++++++
T Consensus 175 ~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~ 249 (334)
T cd08234 175 LAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARR 249 (334)
T ss_pred HHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhc
Confidence 999999999944899999999999999999888888775 444444 344556899999999876688899999999
Q ss_pred CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822 246 GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324 (335)
Q Consensus 246 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~ 324 (335)
+ |+++.+|.... ...+++...+..+++++.+.... ...++.++++++++++.+.+++++++++++++++++.+.
T Consensus 250 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~ 324 (334)
T cd08234 250 G-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMR 324 (334)
T ss_pred C-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHh
Confidence 7 99999987653 34455555555577888776532 356888999999999876665678899999999999998
Q ss_pred CCCeeeEEE
Q 019822 325 QPDCVKVLI 333 (335)
Q Consensus 325 ~~~~~k~vi 333 (335)
+....|+++
T Consensus 325 ~~~~~k~vi 333 (334)
T cd08234 325 SGGALKVVV 333 (334)
T ss_pred cCCceEEEe
Confidence 833348776
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.5e-32 Score=251.39 Aligned_cols=268 Identities=28% Similarity=0.376 Sum_probs=222.6
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|++++.|++||+|++.+...|+.|.+|..|.++.|.+..+ +|+..+|
T Consensus 53 ~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~~~g------------ 116 (325)
T cd08264 53 PMPHIPG-AEF-AGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVVSNG------------ 116 (325)
T ss_pred CCCeecc-cce-eEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce--eeccCCC------------
Confidence 3577899 999 99999999999999999999999988999999999999999997654 3443333
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
+|++|+.++++.++++|+++++++++.+++.+.+||+++. .+++.++++|+|+|+ |++|++++++|+++|+
T Consensus 117 ------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~- 188 (325)
T cd08264 117 ------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA- 188 (325)
T ss_pred ------ceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence 8999999999999999999999999999999999999875 488999999999997 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|+++++ .+.++++|++++++.++ ....+++++ +++|+++|++|+. .+..++++++++ |+++.+|..
T Consensus 189 ~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~--~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~ 255 (325)
T cd08264 189 EVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEIT--KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL 255 (325)
T ss_pred eEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHh--CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC
Confidence 8888863 36678899988887764 345566666 4899999999985 889999999997 999999875
Q ss_pred CCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee
Q 019822 257 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329 (335)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~ 329 (335)
.....+++...+..++.++.++..+. ++.+..+++++...+ . .+++.++++++++|++.+.+++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 256 TGGEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred CCCCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence 33345666666766777887765432 457888888885433 2 356789999999999998876654
No 79
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.7e-32 Score=251.66 Aligned_cols=288 Identities=25% Similarity=0.389 Sum_probs=234.0
Q ss_pred EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++.+.|.++...+|.++| ||+ +|+|+++|++++.|++||+|++.+. .+|+.|++|+++..+.|.+..+. ++..+|
T Consensus 41 ~~~~~g~~~~~~~p~~~g-~e~-~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g 116 (330)
T cd08245 41 LHAAEGDWGGSKYPLVPG-HEI-VGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYTTQG 116 (330)
T ss_pred HHHHcCCCCCCCCCcccC-ccc-eEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCcccc--CcccCC
Confidence 334455554445688999 999 9999999999999999999988665 67999999999999999987653 332333
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
++++|+.+++++++++|+++++.+++.+.+.+.+||+++.. .++.++++|||+|+|.+|++
T Consensus 117 ------------------~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~ 177 (330)
T cd08245 117 ------------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHL 177 (330)
T ss_pred ------------------ccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHH
Confidence 89999999999999999999999999999899999998854 78999999999988889999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++|+.+|+ +|+++++++++.+.++++|++.+++.+. ...... .. +++|+++|+++.......+++++++
T Consensus 178 ~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~----~~-~~~d~vi~~~~~~~~~~~~~~~l~~ 248 (330)
T cd08245 178 AVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA---ELDEQA----AA-GGADVILVTVVSGAAAEAALGGLRR 248 (330)
T ss_pred HHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---cchHHh----cc-CCCCEEEECCCcHHHHHHHHHhccc
Confidence 9999999999 9999999999999999999988887664 333222 22 3799999998876688999999999
Q ss_pred CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~ 325 (335)
+ |+++.++........+...++..++.++.++..+. ...+..+++++.++.+.+ ..+.+++++++++|+.+.+
T Consensus 249 ~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~ 321 (330)
T cd08245 249 G-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEK 321 (330)
T ss_pred C-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHc
Confidence 7 99999986543223333445666788888776432 356788899999998764 3468999999999999987
Q ss_pred CCee-eEEE
Q 019822 326 PDCV-KVLI 333 (335)
Q Consensus 326 ~~~~-k~vi 333 (335)
++.. |+++
T Consensus 322 ~~~~~~~v~ 330 (330)
T cd08245 322 GDVRFRFVL 330 (330)
T ss_pred CCCCcceeC
Confidence 7665 6653
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.7e-32 Score=251.55 Aligned_cols=281 Identities=24% Similarity=0.331 Sum_probs=230.5
Q ss_pred EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++.+.|.++...+|.++| ||+ +|+|+++|+++..|++||+|++.+ ...|+.|++|..+.+++|....+. |+..+|
T Consensus 46 ~~~~~g~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g 121 (329)
T cd08298 46 LHIVEGDLPPPKLPLIPG-HEI-VGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYTVDG 121 (329)
T ss_pred HHHHhCCCCCCCCCcccc-ccc-cEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccccCC
Confidence 344456666556788999 999 999999999999999999998755 468999999999999999877653 443344
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ 165 (335)
+|++|+.++.+.++++|+++++.+++.+++++.|||+++ +.+++.++++|||+|+|++|++
T Consensus 122 ------------------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~ 182 (329)
T cd08298 122 ------------------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHL 182 (329)
T ss_pred ------------------ceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHH
Confidence 899999999999999999999999999999999999988 8899999999999999999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++++++..|+ +|+++++++++++.++++|++.+++.+. . .++++|+++++.+....++.+++++++
T Consensus 183 ~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~ 248 (329)
T cd08298 183 ALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDD---L----------PPEPLDAAIIFAPVGALVPAALRAVKK 248 (329)
T ss_pred HHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCc---c----------CCCcccEEEEcCCcHHHHHHHHHHhhc
Confidence 9999999999 9999999999999999999988887764 1 234799999987766688999999999
Q ss_pred CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~ 325 (335)
+ |+++.+|........++... +.++..+.++... ..+.+..++++++++.+++ .++.|+++++++|++.+.+
T Consensus 249 ~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~ 320 (329)
T cd08298 249 G-GRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKE 320 (329)
T ss_pred C-CEEEEEcCCCCCCCccchhh-hhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHc
Confidence 7 99999885432122233333 3466677665422 2356788889999998765 2578999999999999988
Q ss_pred CCee-eEE
Q 019822 326 PDCV-KVL 332 (335)
Q Consensus 326 ~~~~-k~v 332 (335)
++.. |++
T Consensus 321 ~~~~~~~v 328 (329)
T cd08298 321 GRIRGAAV 328 (329)
T ss_pred CCCcceee
Confidence 7665 765
No 81
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.4e-31 Score=247.17 Aligned_cols=259 Identities=21% Similarity=0.244 Sum_probs=201.9
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
++|.++| ||+ +|+|+++|++++.|++||+|+.. +
T Consensus 67 ~~~~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~---------------------------~----------------- 100 (345)
T cd08293 67 PWQLSQV-LDG-GGVGVVEESKHQKFAVGDIVTSF---------------------------N----------------- 100 (345)
T ss_pred CccCCCc-eEe-eEEEEEeccCCCCCCCCCEEEec---------------------------C-----------------
Confidence 4678999 999 99999999999999999999642 0
Q ss_pred cccccccceeeEEecccceEEcCCCCCccc----ccccccchhhhhHHHHHhcCCCCC--CEEEEEcC-CHHHHHHHHHH
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGA 170 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~--~~VlI~G~-g~vG~~ai~la 170 (335)
++|+||+.++++.++++|+++++.+ +++++.++.|||+++.+.++++++ ++|||+|+ |++|++++|+|
T Consensus 101 -----~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlA 175 (345)
T cd08293 101 -----WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIG 175 (345)
T ss_pred -----CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 1799999999999999999865433 445667899999998887888876 99999987 99999999999
Q ss_pred HHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeE
Q 019822 171 RMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK 249 (335)
Q Consensus 171 ~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~ 249 (335)
+++|+.+|+++++++++.+.+++ +|+++++++++ .++.+.++++++ +++|++||++|+. .+..++++++++ |+
T Consensus 176 k~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~-G~ 249 (345)
T cd08293 176 RLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCP-EGVDVYFDNVGGE-ISDTVISQMNEN-SH 249 (345)
T ss_pred HHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCC-CCceEEEECCCcH-HHHHHHHHhccC-CE
Confidence 99998679999999999999876 99999999887 778888888876 5999999999987 579999999998 99
Q ss_pred EEEEccCCC--ccc----cch--hHHHh-hcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822 250 VIVIGVGVD--AMV----PLN--VIALA-CGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 318 (335)
Q Consensus 250 ~v~~g~~~~--~~~----~~~--~~~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e 318 (335)
++.+|.... ... .+. ...+. .+++.+......... ..+.+..++++++++++++. ....++++++++
T Consensus 250 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~ 327 (345)
T cd08293 250 IILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGE 327 (345)
T ss_pred EEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHH
Confidence 999985322 111 111 11111 233443333211111 11335677889999998765 344569999999
Q ss_pred HHHHhcCCCee-eEEEeC
Q 019822 319 AIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 319 a~~~~~~~~~~-k~vi~~ 335 (335)
|++.+.+++.. |+++++
T Consensus 328 A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 328 AFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHhcCCCCCeEEEEC
Confidence 99999887754 999874
No 82
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=8.5e-32 Score=247.91 Aligned_cols=271 Identities=20% Similarity=0.218 Sum_probs=214.1
Q ss_pred EEeEeecCCCC-CCccccccccccc-eEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVS-GKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~ 83 (335)
|++.+.|.++. ..+|.++| ++.- .|++..+|+.++.|++||+|+..
T Consensus 53 d~~~~~g~~~~~~~~p~~~g-~~~~g~~~~~~v~~~v~~~~vGd~V~~~------------------------------- 100 (338)
T cd08295 53 MRGRMKGHDDSLYLPPFKPG-EVITGYGVAKVVDSGNPDFKVGDLVWGF------------------------------- 100 (338)
T ss_pred HHHhhccCCccccCCCcCCC-CeEeccEEEEEEecCCCCCCCCCEEEec-------------------------------
Confidence 45555664433 34577888 8540 45556678888899999999521
Q ss_pred CCCccccccCceeecccccccceeeEEecc-cceEEcC-CCCCcc-cccccccchhhhhHHHHHhcCCCCCCEEEEEcC-
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVKVD-PSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL- 159 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~- 159 (335)
|+|+||+.+|+ ..++++| +++++. +++++++++.|||+++.+..+++++++|||+|+
T Consensus 101 -------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~ 161 (338)
T cd08295 101 -------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS 161 (338)
T ss_pred -------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 27999999999 8999995 678876 788899999999999888889999999999987
Q ss_pred CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822 160 GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE 238 (335)
Q Consensus 160 g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~ 238 (335)
|++|.+++|+|+.+|+ +|+++++++++.+.+++ +|+++++++.+ ..++.+.+++.++ .++|++||++|+. .+..
T Consensus 162 G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~-~gvd~v~d~~g~~-~~~~ 236 (338)
T cd08295 162 GAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFP-NGIDIYFDNVGGK-MLDA 236 (338)
T ss_pred cHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCC-CCcEEEEECCCHH-HHHH
Confidence 9999999999999999 89999999999999988 99999998653 1367777887776 5899999999985 7899
Q ss_pred HHHhhccCCeEEEEEccCCCccc-----cchhHHHhhcCcEEEEeeccCCCC--cCcHHHHHHHHhCCCCCCCCceeEEe
Q 019822 239 ALETTKVGKGKVIVIGVGVDAMV-----PLNVIALACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHV 311 (335)
Q Consensus 239 ~~~~l~~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~ 311 (335)
++++++++ |+++.+|....... ..+...+.++++++.++....... ...+.++++++.++++++. +...|
T Consensus 237 ~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~ 313 (338)
T cd08295 237 VLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIAD 313 (338)
T ss_pred HHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eeccc
Confidence 99999997 99999986543111 123455666888888765433211 2346778899999998765 44569
Q ss_pred echhHHHHHHHhcCCCee-eEEEeC
Q 019822 312 KLEEIDKAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 312 ~l~~~~ea~~~~~~~~~~-k~vi~~ 335 (335)
+++++++|++.+.+++.. |+++++
T Consensus 314 ~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 314 GLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred CHHHHHHHHHHHhcCCCCceEEEEC
Confidence 999999999999887765 998864
No 83
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.7e-31 Score=244.54 Aligned_cols=261 Identities=19% Similarity=0.198 Sum_probs=208.3
Q ss_pred ecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822 11 ALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90 (335)
Q Consensus 11 ~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~ 90 (335)
.|.++....|.++| +|+ +|+|+++|+ .|++||+|+..
T Consensus 49 ~g~~~~~~~~~i~G-~~~-~g~v~~~~~---~~~~GdrV~~~-------------------------------------- 85 (325)
T TIGR02825 49 VAAKRLKEGDTMMG-QQV-ARVVESKNV---ALPKGTIVLAS-------------------------------------- 85 (325)
T ss_pred cccCcCCCCCcEec-ceE-EEEEEeCCC---CCCCCCEEEEe--------------------------------------
Confidence 34444334578999 999 999999874 59999999632
Q ss_pred ccCceeecccccccceeeEEecccceEEc----CCCCCcccc-cccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 91 VRGQKLYHIFSCSTWSEYMVIDANYVVKV----DPSIDPSDA-SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
++|++|+.++.+++.++ |++++++++ +++++++.|||+++.+.++++++++|||+|+ |++|+
T Consensus 86 ------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~ 153 (325)
T TIGR02825 86 ------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGS 153 (325)
T ss_pred ------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHH
Confidence 16889999999988888 899999987 6788899999999988899999999999986 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++|+|+..|+ +|+++++++++.+.++++|+++++++++ ..++.+.+++.++ +++|++||++|++ .+..++++++
T Consensus 154 ~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~~~~~-~gvdvv~d~~G~~-~~~~~~~~l~ 228 (325)
T TIGR02825 154 VVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEETLKKASP-DGYDCYFDNVGGE-FSNTVIGQMK 228 (325)
T ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHHHHHhCC-CCeEEEEECCCHH-HHHHHHHHhC
Confidence 99999999999 9999999999999999999999999875 1245555666554 4899999999987 6799999999
Q ss_pred cCCeEEEEEccCCCc----ccc--chhHHHhhcCcEEEEeeccCCC---CcCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822 245 VGKGKVIVIGVGVDA----MVP--LNVIALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 315 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~----~~~--~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~ 315 (335)
++ |+++.+|...+. ..+ .....+..+++++.++....+. ..+.+.+++++++++++++. +...|+|++
T Consensus 229 ~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~ 305 (325)
T TIGR02825 229 KF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFEN 305 (325)
T ss_pred cC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHH
Confidence 98 999999865420 111 1233455678888876543221 12357789999999998765 345689999
Q ss_pred HHHHHHHhcCCCee-eEEEe
Q 019822 316 IDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 316 ~~ea~~~~~~~~~~-k~vi~ 334 (335)
+++|++.+.+++.. |+|++
T Consensus 306 ~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 306 MPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHhcCCCCCeEEeC
Confidence 99999999887765 88763
No 84
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.2e-31 Score=241.86 Aligned_cols=259 Identities=22% Similarity=0.362 Sum_probs=216.7
Q ss_pred EeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822 9 SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87 (335)
Q Consensus 9 ~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~ 87 (335)
...|.+.....|.++| +|+ +|+|+++|++++.|++||+|+..+. ..|+.|++|..+..+.|.+... +|...+
T Consensus 45 ~~~g~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 117 (306)
T cd08258 45 IYKGDYDPVETPVVLG-HEF-SGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQAD--- 117 (306)
T ss_pred HHcCCCCcCCCCeeec-cce-EEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce--eeecCC---
Confidence 3344443334578999 999 9999999999999999999998774 6899999999999999986422 233223
Q ss_pred cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHH
Q 019822 88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAV 167 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai 167 (335)
|+|++|+.+++..++++|+++++++++ +...+.++|+++.....+.++++|||.|+|.+|.+++
T Consensus 118 ---------------g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~ 181 (306)
T cd08258 118 ---------------GGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAA 181 (306)
T ss_pred ---------------CceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHH
Confidence 389999999999999999999999887 6668889999998888999999999988899999999
Q ss_pred HHHHHcCCCEEEEEc--CChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822 168 DGARMHGAAKIIGID--KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 168 ~la~~~G~~~V~~~~--~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~ 245 (335)
++|+.+|+ +|+++. +++++.+.++++|++++ +++. .++...+.+++.++++|+++|++|+...+...++++++
T Consensus 182 ~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~ 256 (306)
T cd08258 182 QVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRK 256 (306)
T ss_pred HHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhc
Confidence 99999999 787763 34567788899999888 7776 77888888888777999999999876688899999999
Q ss_pred CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC
Q 019822 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 299 (335)
Q Consensus 246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 299 (335)
+ |+++.+|........+++..++++++++.|+..++ +++++++++++++|
T Consensus 257 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 257 G-GRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG 306 (306)
T ss_pred C-CEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence 7 99999998754346677788888999999988654 57899999998875
No 85
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-30 Score=238.37 Aligned_cols=288 Identities=24% Similarity=0.315 Sum_probs=231.7
Q ss_pred eecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcc
Q 019822 10 FALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88 (335)
Q Consensus 10 ~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~ 88 (335)
..|.++. ..+|.++| ||+ +|+|+++|++++.|++||+|+......|+.|.+| .|..... +|...+
T Consensus 47 ~~g~~~~~~~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~------~~~~~~~--~~~~~~---- 112 (336)
T cd08276 47 LNGRYPPPVKDPLIPL-SDG-AGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPT------AEDEASA--LGGPID---- 112 (336)
T ss_pred hcCCCCCCCCCCcccc-cce-eEEEEEeCCCCcCCCCCCEEEEeccccccccccc------ccccccc--cccccC----
Confidence 3444443 34678899 999 9999999999999999999998776666554433 3322111 232223
Q ss_pred ccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHH
Q 019822 89 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVD 168 (335)
Q Consensus 89 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~ 168 (335)
|++++|+.++.+.++++|+++++.+++.+++.+.+||+++.+...+.++++|+|+|+|++|+++++
T Consensus 113 --------------g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~ 178 (336)
T cd08276 113 --------------GVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQ 178 (336)
T ss_pred --------------ceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHH
Confidence 389999999999999999999999999999999999999877788999999999988999999999
Q ss_pred HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822 169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 248 (335)
Q Consensus 169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G 248 (335)
++++.|+ +|+++++++++.+.++++|++.+++.+. ..++...+++.++++++|+++|+++.. .+..++++++++ |
T Consensus 179 ~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-G 253 (336)
T cd08276 179 FAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPG-G 253 (336)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCC-C
Confidence 9999999 8999999999999998899988888653 134777788888878999999999865 778999999998 9
Q ss_pred EEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCe
Q 019822 249 KVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC 328 (335)
Q Consensus 249 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~ 328 (335)
+++.+|.............++.+++++.+...+. ...+.++++++.++.+.+. .++.+++++++++++.+.+++.
T Consensus 254 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~ 328 (336)
T cd08276 254 VISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSH 328 (336)
T ss_pred EEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCC
Confidence 9999987654223445556667999999887543 4568888999988876543 5578999999999999887766
Q ss_pred e-eEEEeC
Q 019822 329 V-KVLITI 335 (335)
Q Consensus 329 ~-k~vi~~ 335 (335)
. |+++++
T Consensus 329 ~~kvv~~~ 336 (336)
T cd08276 329 FGKVVIRV 336 (336)
T ss_pred CceEEEeC
Confidence 4 888763
No 86
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.98 E-value=1.6e-30 Score=237.64 Aligned_cols=262 Identities=20% Similarity=0.185 Sum_probs=218.1
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|+++..+++||+|+.... ..+
T Consensus 58 ~~p~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~---------------------------~~~------------- 95 (324)
T cd08244 58 ELPYVPG-GEV-AGVVDAVGPGVDPAWLGRRVVAHTG---------------------------RAG------------- 95 (324)
T ss_pred CCCcCCc-cce-EEEEEEeCCCCCCCCCCCEEEEccC---------------------------CCC-------------
Confidence 4578899 999 9999999999999999999975421 011
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
|+|++|+.++.+.++++|+++++++++.+++.+.||| ++.+...+.++++|+|+|+ |.+|.+++++|+.+|+
T Consensus 96 -----g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~- 168 (324)
T cd08244 96 -----GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA- 168 (324)
T ss_pred -----ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Confidence 3899999999999999999999999999999999995 5667888999999999985 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|+++++++++.+.++++|++.++++++ .++...+.++++++++|+++|++|+. ....++++++.+ |+++.+|..
T Consensus 169 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~ 243 (324)
T cd08244 169 TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWA 243 (324)
T ss_pred EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecC
Confidence 8999999999999999999988888876 67778888888888999999999987 568999999997 999999876
Q ss_pred CCccccchhHHHhhcCcEEEEeeccCCC---CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEE
Q 019822 257 VDAMVPLNVIALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVL 332 (335)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~v 332 (335)
.....+++...++.+++++.+....... ..+.+..+++++.++++.. ++++.++++++++|++.+.+++.. |++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 321 (324)
T cd08244 244 SGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVL 321 (324)
T ss_pred CCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEE
Confidence 5433355545555688888877643321 1234667888998988654 366789999999999999887765 888
Q ss_pred EeC
Q 019822 333 ITI 335 (335)
Q Consensus 333 i~~ 335 (335)
+++
T Consensus 322 ~~~ 324 (324)
T cd08244 322 LLP 324 (324)
T ss_pred EeC
Confidence 764
No 87
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.98 E-value=1.6e-30 Score=237.60 Aligned_cols=268 Identities=21% Similarity=0.248 Sum_probs=222.2
Q ss_pred eecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcc
Q 019822 10 FALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88 (335)
Q Consensus 10 ~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~ 88 (335)
+.|.++. ..+|.++| ||+ +|+|+++|++++.+++||+|+..+. +
T Consensus 46 ~~~~~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~-----------------------------~---- 90 (323)
T cd05282 46 ISGAYGSRPPLPAVPG-NEG-VGVVVEVGSGVSGLLVGQRVLPLGG-----------------------------E---- 90 (323)
T ss_pred hcCcCCCCCCCCCcCC-cce-EEEEEEeCCCCCCCCCCCEEEEeCC-----------------------------C----
Confidence 3444432 34578999 999 9999999999999999999975421 1
Q ss_pred ccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHH
Q 019822 89 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAV 167 (335)
Q Consensus 89 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai 167 (335)
|+|++|+.++...++++|+++++.+++.+++.+.+||+++.+...+.++++|||+|+ |.+|++++
T Consensus 91 --------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~ 156 (323)
T cd05282 91 --------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLI 156 (323)
T ss_pred --------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHH
Confidence 389999999999999999999999999988899999999888788899999999987 99999999
Q ss_pred HHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCC
Q 019822 168 DGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 247 (335)
Q Consensus 168 ~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~ 247 (335)
++|+.+|+ +|+++.+++++.+.++++|++++++++. .++...+.++++++++|+++|++|+. .....+++++++
T Consensus 157 ~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~- 230 (323)
T cd05282 157 QLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPG- 230 (323)
T ss_pred HHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCC-
Confidence 99999999 8999999999999999999999999886 67888888888888999999999987 567889999997
Q ss_pred eEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 248 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
|+++.+|........++...+..+++++.+.....+.. .+.+..+++++.++.+.+. .++.++++++++||
T Consensus 231 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~ 308 (323)
T cd05282 231 GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAV 308 (323)
T ss_pred CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHH
Confidence 99999987654334455555555889999877554321 1346778889999987643 56789999999999
Q ss_pred HHhcCCCee-eEEEe
Q 019822 321 QLLKQPDCV-KVLIT 334 (335)
Q Consensus 321 ~~~~~~~~~-k~vi~ 334 (335)
+.+.+++.. |++++
T Consensus 309 ~~~~~~~~~~kvv~~ 323 (323)
T cd05282 309 AAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHhcCCCCceEeeC
Confidence 999887655 77763
No 88
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.98 E-value=1.3e-30 Score=231.61 Aligned_cols=255 Identities=29% Similarity=0.390 Sum_probs=209.1
Q ss_pred EEeEeecCCC-CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDS-QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~-~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++ ...+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|++|+. .|..... .+....
T Consensus 15 d~~~~~g~~~~~~~~~~~~G-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~ 86 (271)
T cd05188 15 DLHIRRGGYPPPPKLPLILG-HEG-AGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGI--LGEGLD 86 (271)
T ss_pred hHHHHcCCCCcCCCCCcccc-ccc-EEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCE--eccccC
Confidence 4555566654 345688999 999 999999999999999999999999999999999997 6765544 233333
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL 164 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~ 164 (335)
| ++++|+.++.+.++++|+++++++++.+++++.+||+++.....+.++++|||+|+|++|+
T Consensus 87 g------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 87 G------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred C------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 3 8999999999999999999999999999899999999987767778999999999855999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++++..|. +|+++++++++.+.++++|++.+++... .++...+. .+.+.++|+++|+++.......++++++
T Consensus 149 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~ 223 (271)
T cd05188 149 LAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLR 223 (271)
T ss_pred HHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcc
Confidence 99999999998 9999999999999999999988888776 56666666 5566689999999998447889999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHH
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDK 295 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 295 (335)
++ |+++.++..............+.+++++.++.... ..+++.++++
T Consensus 224 ~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 224 PG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred cC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 97 99999987664222222344566899999887543 3466666665
No 89
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.98 E-value=1.7e-30 Score=238.13 Aligned_cols=254 Identities=22% Similarity=0.216 Sum_probs=206.5
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| +|+ +|+|++ .++.|++||+|+..
T Consensus 58 ~~p~v~G-~e~-~G~V~~---~~~~~~~Gd~V~~~--------------------------------------------- 87 (329)
T cd08294 58 EGDTMIG-TQV-AKVIES---KNSKFPVGTIVVAS--------------------------------------------- 87 (329)
T ss_pred CCCcEec-ceE-EEEEec---CCCCCCCCCEEEee---------------------------------------------
Confidence 4688999 999 999985 44679999999631
Q ss_pred cccccccceeeEEeccc---ceEEcCCCCC--c---ccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHH
Q 019822 98 HIFSCSTWSEYMVIDAN---YVVKVDPSID--P---SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVD 168 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~---~~~~lp~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~ 168 (335)
++|++|+.++++ .++++|++++ + ..+++++++++|||+++.+..++.++++|||+|+ |++|.+++|
T Consensus 88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq 162 (329)
T cd08294 88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ 162 (329)
T ss_pred -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence 168899999999 9999999988 2 2234577899999999988899999999999985 999999999
Q ss_pred HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822 169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 248 (335)
Q Consensus 169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G 248 (335)
+|+.+|+ +|+++++++++.++++++|+++++++++ .++.+.++++++ +++|++||++|+. .+..++++++++ |
T Consensus 163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~-~gvd~vld~~g~~-~~~~~~~~l~~~-G 235 (329)
T cd08294 163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAP-DGIDCYFDNVGGE-FSSTVLSHMNDF-G 235 (329)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCC-CCcEEEEECCCHH-HHHHHHHhhccC-C
Confidence 9999999 8999999999999999999999999987 778888888776 5899999999985 789999999997 9
Q ss_pred EEEEEccCCC-cc-----ccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 249 KVIVIGVGVD-AM-----VPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 249 ~~v~~g~~~~-~~-----~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
+++.+|.... .. .......++.+++++.++...... ..+.+..++++++++++++. ....++++++++|+
T Consensus 236 ~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~ 313 (329)
T cd08294 236 RVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAF 313 (329)
T ss_pred EEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHH
Confidence 9999985432 11 122234456688888887643321 12336678899999998765 33468999999999
Q ss_pred HHhcCCCee-eEEEeC
Q 019822 321 QLLKQPDCV-KVLITI 335 (335)
Q Consensus 321 ~~~~~~~~~-k~vi~~ 335 (335)
+.+.+++.. |+++++
T Consensus 314 ~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 314 IGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHcCCCCCeEEEeC
Confidence 999887765 998874
No 90
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=7e-30 Score=232.16 Aligned_cols=271 Identities=23% Similarity=0.268 Sum_probs=217.5
Q ss_pred EEeEe-ecCCCC--CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822 6 TLISF-ALKDSQ--RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82 (335)
Q Consensus 6 d~~~~-~g~~~~--~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~ 82 (335)
|++.+ .|..+. +.+|.++| ||+ +|+|+++|++++.+++||+|+...
T Consensus 35 d~~~~~~g~~~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------- 83 (312)
T cd08269 35 DLPAFNQGRPWFVYPAEPGGPG-HEG-WGRVVALGPGVRGLAVGDRVAGLS----------------------------- 83 (312)
T ss_pred chHHHccCCCCcccCCCCcccc-eee-EEEEEEECCCCcCCCCCCEEEEec-----------------------------
Confidence 44444 554432 23478999 999 999999999999999999997531
Q ss_pred cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822 83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV 162 (335)
Q Consensus 83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v 162 (335)
.|+|++|+.++++.++++|+++ ..++....+++++++++. ..++.++++|||+|+|.+
T Consensus 84 -------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~v 141 (312)
T cd08269 84 -------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFI 141 (312)
T ss_pred -------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHH
Confidence 1389999999999999999998 233322267889998875 788999999999988999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|.+++++|+.+|+++|+++.+++++.++++++|++++++++. .++...++++++++++|+++||+|+...+...+++
T Consensus 142 g~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~ 218 (312)
T cd08269 142 GLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGEL 218 (312)
T ss_pred HHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHH
Confidence 999999999999933999999999999999999998988776 67888888888888999999999877678999999
Q ss_pred hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC-CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
++++ |+++.+|.......++++..+..+++.+.+....... ..+.++.++++++++.+.+..++++.++++++++|++
T Consensus 219 l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 297 (312)
T cd08269 219 VAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFE 297 (312)
T ss_pred hccC-CEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence 9997 9999998654333445555666688888776533321 2356888999999999876555667899999999999
Q ss_pred HhcCCCe--eeEEE
Q 019822 322 LLKQPDC--VKVLI 333 (335)
Q Consensus 322 ~~~~~~~--~k~vi 333 (335)
.+.+++. +|+++
T Consensus 298 ~~~~~~~~~~~~~~ 311 (312)
T cd08269 298 AARRRPDGFIKGVI 311 (312)
T ss_pred HHHhCCCCceEEEe
Confidence 9988764 58876
No 91
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=1.8e-30 Score=237.81 Aligned_cols=275 Identities=21% Similarity=0.194 Sum_probs=217.3
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...|.++...+|.++| ||+ +|+|+.+|++++.+++||+|+....
T Consensus 44 d~~~~~g~~~~~~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~------------------------------- 90 (327)
T PRK10754 44 DTYIRSGLYPPPSLPSGLG-TEA-AGVVSKVGSGVKHIKVGDRVVYAQS------------------------------- 90 (327)
T ss_pred HhhhcCCCCCCCCCCCccC-cce-EEEEEEeCCCCCCCCCCCEEEECCC-------------------------------
Confidence 4455566666555788999 999 9999999999999999999963210
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
+.|+|++|+.++.+.++++|+++++++++.+++.+.+||.++.....+.++++|+|+|+ |.+|+
T Consensus 91 ---------------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~ 155 (327)
T PRK10754 91 ---------------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGL 155 (327)
T ss_pred ---------------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHH
Confidence 01389999999999999999999999999888899999998877788999999999975 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++|+.+|+ +|+++++++++.+.++++|++++++.+. .++.+.++++++++++|+++||+++. .+...+++++
T Consensus 156 ~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~ 230 (327)
T PRK10754 156 IACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQ 230 (327)
T ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhc
Confidence 99999999999 8999999999999999999988998876 67888889988888999999999986 7788999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEE-E-EeeccCCCCc----CcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTL-K-GTTFGGIKTK----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 318 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e 318 (335)
++ |+++.+|........++...+..++..+ . ....+..... ..+..+++++.++.+++..+.++.++++++++
T Consensus 231 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~ 309 (327)
T PRK10754 231 RR-GLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQR 309 (327)
T ss_pred cC-CEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHH
Confidence 97 9999998765322223333332222111 1 1100111111 12445788999999876555568899999999
Q ss_pred HHHHhcCCCee-eEEEe
Q 019822 319 AIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 319 a~~~~~~~~~~-k~vi~ 334 (335)
+++.+.+++.. |+|+.
T Consensus 310 a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 310 AHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHcCCCcceEEEe
Confidence 99999887754 99886
No 92
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.97 E-value=3.4e-30 Score=237.43 Aligned_cols=260 Identities=24% Similarity=0.267 Sum_probs=214.3
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 98 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~ 98 (335)
+|.++| ||+ +|+|+++|+++..|++||+|+.... .
T Consensus 63 ~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~----------------------------~--------------- 97 (341)
T cd08290 63 PPAVGG-NEG-VGEVVKVGSGVKSLKPGDWVIPLRP----------------------------G--------------- 97 (341)
T ss_pred CCCCCC-cce-EEEEEEeCCCCCCCCCCCEEEecCC----------------------------C---------------
Confidence 677999 999 9999999999999999999975321 0
Q ss_pred ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822 99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~ 177 (335)
.|+|++|+.++.+.++++|+++++++++++++.+.|||+++.....+.++++|||+|+ |++|++++++|++.|+ +
T Consensus 98 ---~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~ 173 (341)
T cd08290 98 ---LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K 173 (341)
T ss_pred ---CccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence 1389999999999999999999999999999999999999877788999999999986 9999999999999999 8
Q ss_pred EEEEcCCh----hhHHHHHhcCCceEeCCCCCCch---hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEE
Q 019822 178 IIGIDKNP----WKKEKGKAFGMTDFINPDDEPNK---SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 250 (335)
Q Consensus 178 V~~~~~~~----~~~~~~~~lga~~v~~~~~~~~~---~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~ 250 (335)
|+++++++ ++.+.++++|++++++++. . ++...++.++++ ++|+++||+|+. .+...+++++++ |++
T Consensus 174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~ 247 (341)
T cd08290 174 TINVVRDRPDLEELKERLKALGADHVLTEEE---LRSLLATELLKSAPGG-RPKLALNCVGGK-SATELARLLSPG-GTM 247 (341)
T ss_pred EEEEEcCCCcchhHHHHHHhcCCCEEEeCcc---cccccHHHHHHHHcCC-CceEEEECcCcH-hHHHHHHHhCCC-CEE
Confidence 88887765 6788888999999998875 4 677788887777 899999999987 567899999997 999
Q ss_pred EEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEe---echhHHHHH
Q 019822 251 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAI 320 (335)
Q Consensus 251 v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~---~l~~~~ea~ 320 (335)
+.++........++...++.+++++.+.....+.. ...+..+++++.++.+.+. ..+.+ +++++++|+
T Consensus 248 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~ 325 (341)
T cd08290 248 VTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDAL 325 (341)
T ss_pred EEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHH
Confidence 99986543334455545566899999876543210 1247778899999987654 33456 999999999
Q ss_pred HHhcCCCee-eEEEeC
Q 019822 321 QLLKQPDCV-KVLITI 335 (335)
Q Consensus 321 ~~~~~~~~~-k~vi~~ 335 (335)
+.+.+++.. |+++++
T Consensus 326 ~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 326 ANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHhhcCCCCeEEEeC
Confidence 999877665 998875
No 93
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=6.6e-30 Score=234.46 Aligned_cols=260 Identities=27% Similarity=0.298 Sum_probs=214.2
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|+++..+++||+|+.. ..+
T Consensus 57 ~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~-----------------------------~~~------------- 92 (334)
T PTZ00354 57 GSSEILG-LEV-AGYVEDVGSDVKRFKEGDRVMAL-----------------------------LPG------------- 92 (334)
T ss_pred CCCcccc-eee-EEEEEEeCCCCCCCCCCCEEEEe-----------------------------cCC-------------
Confidence 4567899 999 99999999999999999999632 112
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
|++++|++++++.++++|+++++.+++.+++++.+||+++.+...+.++++|||+|+ |.+|++++++|+.+|+
T Consensus 93 -----g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~- 166 (334)
T PTZ00354 93 -----GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA- 166 (334)
T ss_pred -----CceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence 289999999999999999999999999999999999999877788999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchh-HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~-~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+++.+.+++++.+.++++|++++++++. .+ +...+++.++++++|+++|++++. .+..++++++++ |+++.++.
T Consensus 167 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~i~~~~ 241 (334)
T PTZ00354 167 ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVD-GKWIVYGF 241 (334)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccC-CeEEEEec
Confidence 7777888999999999999988888765 44 777888888778999999999876 789999999997 99999986
Q ss_pred CCCcccc-chhHHHhhcCcEEEEeeccCCCCc-------CcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822 256 GVDAMVP-LNVIALACGGRTLKGTTFGGIKTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327 (335)
Q Consensus 256 ~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~ 327 (335)
..+.... ++...+..++.++.++........ ..+..+++++.++.+.+. +++.+++++++++++.+.+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~ 319 (334)
T PTZ00354 242 MGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNK 319 (334)
T ss_pred CCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCC
Confidence 5432322 555556667778888764431110 224667788888886643 567899999999999988766
Q ss_pred ee-eEEEe
Q 019822 328 CV-KVLIT 334 (335)
Q Consensus 328 ~~-k~vi~ 334 (335)
.. |++++
T Consensus 320 ~~~kvvv~ 327 (334)
T PTZ00354 320 NIGKVVLT 327 (334)
T ss_pred CCceEEEe
Confidence 54 88875
No 94
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.97 E-value=1.1e-29 Score=233.54 Aligned_cols=268 Identities=17% Similarity=0.180 Sum_probs=208.2
Q ss_pred eEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822 8 ISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87 (335)
Q Consensus 8 ~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~ 87 (335)
+.+.|..+...+|.++| ||+ +|+|+++|++++.|++||+|+... +....
T Consensus 47 ~~~~g~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~--------------------------~~~~~--- 95 (336)
T TIGR02817 47 KVRARMAPEAGQPKILG-WDA-AGVVVAVGDEVTLFKPGDEVWYAG--------------------------DIDRP--- 95 (336)
T ss_pred HHHcCCCCCCCCCcccc-eee-EEEEEEeCCCCCCCCCCCEEEEcC--------------------------CCCCC---
Confidence 33445444445688999 999 999999999999999999997431 01112
Q ss_pred cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCC-----CCEEEEEcC-CH
Q 019822 88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GT 161 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~VlI~G~-g~ 161 (335)
|+|++|+.++++.++++|+++++++++.+++.+.|||+++....++.+ +++|||+|+ |.
T Consensus 96 ---------------g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~ 160 (336)
T TIGR02817 96 ---------------GSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGG 160 (336)
T ss_pred ---------------CcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcH
Confidence 389999999999999999999999999999999999999888888877 999999986 99
Q ss_pred HHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 162 VGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 162 vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
+|++++|+|+.+ |+ +|+++++++++.+.++++|+++++++.. ++...+++. .++++|+++|++++...+...+
T Consensus 161 vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~i~~~-~~~~vd~vl~~~~~~~~~~~~~ 234 (336)
T TIGR02817 161 VGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK----PLKAQLEKL-GLEAVSYVFSLTHTDQHFKEIV 234 (336)
T ss_pred HHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC----CHHHHHHHh-cCCCCCEEEEcCCcHHHHHHHH
Confidence 999999999998 99 9999999999999999999999987653 466677764 4458999999987666789999
Q ss_pred HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeecc-CC--CC------cCcHHHHHHHHhCCCCCCCCceeEEe
Q 019822 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG-GI--KT------KSDLPTLLDKCKNKEFKLHQLLTHHV 311 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~--~~------~~~~~~~~~~i~~~~~~~~~~~~~~~ 311 (335)
++++++ |+++.++.. ..++...+..+++.+.+.... .. .. ...+.++++++.++.+++. +++.+
T Consensus 235 ~~l~~~-G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~ 307 (336)
T TIGR02817 235 ELLAPQ-GRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETF 307 (336)
T ss_pred HHhccC-CEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhcc
Confidence 999997 999988532 233344444455666653322 11 00 1346778899999987643 33344
Q ss_pred ---echhHHHHHHHhcCCCee-eEEEe
Q 019822 312 ---KLEEIDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 312 ---~l~~~~ea~~~~~~~~~~-k~vi~ 334 (335)
+++++++|++.+.+++.. |+++.
T Consensus 308 ~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 308 GTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 479999999999887664 77764
No 95
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=2.9e-30 Score=235.07 Aligned_cols=224 Identities=26% Similarity=0.345 Sum_probs=174.1
Q ss_pred ccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc------CCCCCCEEEEEcC-CHHHHHHHHHHHHcCC
Q 019822 103 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA------KVEKGSSVAVLGL-GTVGLGAVDGARMHGA 175 (335)
Q Consensus 103 g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~~~~VlI~G~-g~vG~~ai~la~~~G~ 175 (335)
|+|+||+.+|+..++++|+++++++||+++.++.|||.+++... +++++++|||+|+ |++|++++|+|++.++
T Consensus 104 g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~ 183 (347)
T KOG1198|consen 104 GGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA 183 (347)
T ss_pred CceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC
Confidence 38999999999999999999999999999999999999999999 8999999999976 9999999999999995
Q ss_pred CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
..++++.++++.++++++|+++++||++ .++.+.+++.+ +.+||+||||+|++ .......++... |+...++.
T Consensus 184 -~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~ 256 (347)
T KOG1198|consen 184 -IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGL 256 (347)
T ss_pred -cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhc-CCCccEEEECCCCC-ccccchhhhccC-CceEEEEe
Confidence 4455555899999999999999999998 99999999988 66999999999997 667788888886 76555554
Q ss_pred CCCccccchhH----HH---hhcCcEEEEeeccC--C-CCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822 256 GVDAMVPLNVI----AL---ACGGRTLKGTTFGG--I-KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325 (335)
Q Consensus 256 ~~~~~~~~~~~----~~---~~~~~~~~g~~~~~--~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~ 325 (335)
..+...+.... .+ ......+.+..+.. + ...+.+..+.++++++++++ .+.+.||++++.+|++.+.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp--~i~~~~p~~~~~ea~~~~~~ 334 (347)
T KOG1198|consen 257 VGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKP--VIDSVYPFSQAKEAFEKLEK 334 (347)
T ss_pred ccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccC--CcceeeeHHHHHHHHHHHhh
Confidence 43311111111 00 00111111111110 1 12355778889999997554 48899999999999999988
Q ss_pred CCe-eeEEEeC
Q 019822 326 PDC-VKVLITI 335 (335)
Q Consensus 326 ~~~-~k~vi~~ 335 (335)
+.. .|+++.+
T Consensus 335 ~~~~GK~vl~~ 345 (347)
T KOG1198|consen 335 SHATGKVVLEK 345 (347)
T ss_pred cCCcceEEEEe
Confidence 655 4888763
No 96
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=4.2e-29 Score=227.53 Aligned_cols=269 Identities=20% Similarity=0.310 Sum_probs=210.1
Q ss_pred eEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822 8 ISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87 (335)
Q Consensus 8 ~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~ 87 (335)
+...|.++....|.++| ||+ +|+|+++|. ..+++||+|+..... ++...+
T Consensus 45 ~~~~~~~~~~~~~~~~g-~e~-~G~v~~vG~--~~~~~Gd~V~~~~~~-----------------------~~~~~~--- 94 (320)
T cd08243 45 FTRQGHSPSVKFPRVLG-IEA-VGEVEEAPG--GTFTPGQRVATAMGG-----------------------MGRTFD--- 94 (320)
T ss_pred HHhcCCCCCCCCCcccc-cee-EEEEEEecC--CCCCCCCEEEEecCC-----------------------CCCCCC---
Confidence 33445544445678999 999 999999995 579999999764210 111112
Q ss_pred cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822 88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA 166 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a 166 (335)
|+|++|+.+++..++++|+++++++++.+++++.|||+++.+...+.++++|||+|+ |.+|+++
T Consensus 95 ---------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~ 159 (320)
T cd08243 95 ---------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAA 159 (320)
T ss_pred ---------------cccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHH
Confidence 389999999999999999999999999999999999999888788999999999987 9999999
Q ss_pred HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822 167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246 (335)
Q Consensus 167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~ 246 (335)
+++|+.+|+ +|+++++++++.+.++++|++++++. . .++...++++ ++++|+++|++++. .+...+++++++
T Consensus 160 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~--~~~~d~vl~~~~~~-~~~~~~~~l~~~ 231 (320)
T cd08243 160 LKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA--PGGFDKVLELVGTA-TLKDSLRHLRPG 231 (320)
T ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh--CCCceEEEECCChH-HHHHHHHHhccC
Confidence 999999999 89999999999999999999888754 3 4567777777 55899999999986 789999999997
Q ss_pred CeEEEEEccCCCc--cccchhHHHh--hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822 247 KGKVIVIGVGVDA--MVPLNVIALA--CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322 (335)
Q Consensus 247 ~G~~v~~g~~~~~--~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~ 322 (335)
|+++.+|...+. .......... .+++.+.+...... ....+..++++++++.+++. .++.++++++++|++.
T Consensus 232 -g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~ 307 (320)
T cd08243 232 -GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV-PQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAY 307 (320)
T ss_pred -CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh-hHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHH
Confidence 999999875331 1111122222 46677766553221 12347778899999987653 5678999999999999
Q ss_pred hcCCCee-eEEE
Q 019822 323 LKQPDCV-KVLI 333 (335)
Q Consensus 323 ~~~~~~~-k~vi 333 (335)
+.+++.. |+++
T Consensus 308 ~~~~~~~~kvvv 319 (320)
T cd08243 308 MESNRAFGKVVV 319 (320)
T ss_pred HHhCCCCCcEEe
Confidence 9877654 7664
No 97
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=9.3e-29 Score=226.07 Aligned_cols=274 Identities=20% Similarity=0.223 Sum_probs=206.6
Q ss_pred EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++. ..+|.++| ||+ +|+|+++ +++.|++||+|+..... .|+..+
T Consensus 43 d~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~~--~~~~~~~Gd~V~~~~~~-----------------------~g~~~~ 95 (325)
T cd05280 43 DALAATGNGGVTRNYPHTPG-IDA-AGTVVSS--DDPRFREGDEVLVTGYD-----------------------LGMNTD 95 (325)
T ss_pred HHHHhcCCCCCCCCCCCccC-ccc-EEEEEEe--CCCCCCCCCEEEEcccc-----------------------cCCCCC
Confidence 44445565543 34578999 999 9999999 45679999999864210 133233
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC--CC-CCCEEEEEcC-C
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK--VE-KGSSVAVLGL-G 160 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~--~~-~~~~VlI~G~-g 160 (335)
| +|++|+.++++.++++|+++++++++.+++.+.++|+++..... +. .+++|||+|+ |
T Consensus 96 g------------------~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g 157 (325)
T cd05280 96 G------------------GFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG 157 (325)
T ss_pred c------------------eeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence 3 89999999999999999999999999999999999998755433 35 3579999997 9
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
.+|++++++|+.+|+ +|+++++++++++.++++|++++++++. . ...+.+...++++|+++|++++. .+...+
T Consensus 158 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~ 230 (325)
T cd05280 158 GVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGD-VLANLL 230 (325)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchH-HHHHHH
Confidence 999999999999999 8999999999999999999999988764 2 12233334445899999999986 789999
Q ss_pred HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
+++++. |+++.+|........++...++.+++++.+........ ...+..+.+++..+.. +.+.+++++++++
T Consensus 231 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 306 (325)
T cd05280 231 KQTKYG-GVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELP 306 (325)
T ss_pred HhhcCC-CEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHH
Confidence 999997 99999987654233455555546888888876543211 1122334444445522 2366799999999
Q ss_pred HHHHHhcCCCee-eEEEeC
Q 019822 318 KAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 318 ea~~~~~~~~~~-k~vi~~ 335 (335)
+|++.+.+++.. |+++++
T Consensus 307 ~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 307 EAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHhcCCcceEEEEeC
Confidence 999999887765 888864
No 98
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=1.3e-28 Score=220.28 Aligned_cols=253 Identities=26% Similarity=0.339 Sum_probs=202.1
Q ss_pred ecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822 11 ALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90 (335)
Q Consensus 11 ~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~ 90 (335)
+|.+|.+ +|.++| ||+ +|+|+++|+++++|++||+|+..
T Consensus 13 ~~~~~~~-~p~v~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------------- 51 (277)
T cd08255 13 TGTEKLP-LPLPPG-YSS-VGRVVEVGSGVTGFKPGDRVFCF-------------------------------------- 51 (277)
T ss_pred ccCccCc-CCcccC-cce-eEEEEEeCCCCCCCCCCCEEEec--------------------------------------
Confidence 4777765 899999 999 99999999999999999999743
Q ss_pred ccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHH
Q 019822 91 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGA 170 (335)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la 170 (335)
+.+++|+.++.+.++++|+++++.+++.+ +.+.|||+++ ...++.+++++||+|+|.+|++++++|
T Consensus 52 ------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a 117 (277)
T cd08255 52 ------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLA 117 (277)
T ss_pred ------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 15899999999999999999999998888 7899999987 578899999999998899999999999
Q ss_pred HHcCCCEEEEEcCChhhHHHHHhcC-CceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeE
Q 019822 171 RMHGAAKIIGIDKNPWKKEKGKAFG-MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK 249 (335)
Q Consensus 171 ~~~G~~~V~~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~ 249 (335)
+.+|+++|+++++++++.+.++++| ++.+++... ..+.++++|++||+++....+...+++++++ |+
T Consensus 118 ~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~ 185 (277)
T cd08255 118 KAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GR 185 (277)
T ss_pred HHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cE
Confidence 9999933999999999999999999 555544332 1224558999999998766889999999997 99
Q ss_pred EEEEccCCCccccchhHHHhhcCcEEEEeeccCCC---------CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822 250 VIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK---------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320 (335)
Q Consensus 250 ~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~ 320 (335)
++.+|..... .......+..+.+++.+....... ..+.+.++++++.++.+... +.+.++++++++|+
T Consensus 186 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~ 262 (277)
T cd08255 186 VVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAY 262 (277)
T ss_pred EEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHH
Confidence 9999876532 111223344456677766543221 12567889999999985543 56789999999999
Q ss_pred HHhcCC--CeeeEEE
Q 019822 321 QLLKQP--DCVKVLI 333 (335)
Q Consensus 321 ~~~~~~--~~~k~vi 333 (335)
+.+.++ ..+|+++
T Consensus 263 ~~~~~~~~~~~k~~~ 277 (277)
T cd08255 263 RLLFEDPPECLKVVL 277 (277)
T ss_pred HHHHcCCccceeeeC
Confidence 999877 3458764
No 99
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=2.4e-28 Score=221.89 Aligned_cols=261 Identities=25% Similarity=0.308 Sum_probs=215.1
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+.+|+++..+++||+|+... ..
T Consensus 53 ~~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~-----------------------------~~------------- 88 (320)
T cd05286 53 PLPFVLG-VEG-AGVVEAVGPGVTGFKVGDRVAYAG-----------------------------PP------------- 88 (320)
T ss_pred CCCccCC-cce-eEEEEEECCCCCCCCCCCEEEEec-----------------------------CC-------------
Confidence 3567899 999 999999999999999999997531 01
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
|++++|+.++.+.++++|+++++.+++.++..+.++++++.+..++.++++|||+|+ |.+|++++++++.+|+
T Consensus 89 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~- 162 (320)
T cd05286 89 -----GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA- 162 (320)
T ss_pred -----CceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999888899999999888888999999999996 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|+++++++++.+.++++|++++++... .++...+++++.++++|+++||+++. ....++++++++ |+++.+|..
T Consensus 163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~ 237 (320)
T cd05286 163 TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNA 237 (320)
T ss_pred EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecC
Confidence 8999999999999999999999888776 67888888888777999999999986 788999999997 999999875
Q ss_pred CCccccchhHHHhhcCcEEEEeeccCCC-Cc----CcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-e
Q 019822 257 VDAMVPLNVIALACGGRTLKGTTFGGIK-TK----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-K 330 (335)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~----~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k 330 (335)
......++...+..+++.+.+.....+. .. +.+..+++++.++.+.+. .++.+++++++++++.+.+++.. |
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ 315 (320)
T cd05286 238 SGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGK 315 (320)
T ss_pred CCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCce
Confidence 4322234444443578888765533321 11 224567888888887654 56789999999999999887765 8
Q ss_pred EEEeC
Q 019822 331 VLITI 335 (335)
Q Consensus 331 ~vi~~ 335 (335)
+++++
T Consensus 316 vv~~~ 320 (320)
T cd05286 316 LLLIP 320 (320)
T ss_pred EEEeC
Confidence 88753
No 100
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1.3e-28 Score=225.78 Aligned_cols=266 Identities=22% Similarity=0.214 Sum_probs=211.9
Q ss_pred EeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822 9 SFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87 (335)
Q Consensus 9 ~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~ 87 (335)
...|.++. ..+|.++| ||+ +|+|+++|+++..+++||+|+...
T Consensus 49 ~~~g~~~~~~~~p~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~---------------------------------- 92 (329)
T cd08250 49 FTAGRYDPGVKPPFDCG-FEG-VGEVVAVGEGVTDFKVGDAVATMS---------------------------------- 92 (329)
T ss_pred HHhCCCCCCCCCCcccC-cee-EEEEEEECCCCCCCCCCCEEEEec----------------------------------
Confidence 33455543 45788999 999 999999999999999999997531
Q ss_pred cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822 88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA 166 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a 166 (335)
.|+|++|+.++.+.++++|++ +.+++.++.++.|||+++.+..++.++++|+|+|+ |.+|+++
T Consensus 93 --------------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~ 156 (329)
T cd08250 93 --------------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFA 156 (329)
T ss_pred --------------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHH
Confidence 138999999999999999997 35677788899999999887788999999999986 9999999
Q ss_pred HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822 167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246 (335)
Q Consensus 167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~ 246 (335)
+++|+..|+ +|+++++++++.+.++++|++.+++.+. .++...+.+..+ +++|+++|++|+. .+...+++++++
T Consensus 157 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~-~~vd~v~~~~g~~-~~~~~~~~l~~~ 230 (329)
T cd08250 157 VQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYP-KGVDVVYESVGGE-MFDTCVDNLALK 230 (329)
T ss_pred HHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcC-CCCeEEEECCcHH-HHHHHHHHhccC
Confidence 999999999 8999999999999999999988888776 566667766655 5899999999975 789999999997
Q ss_pred CeEEEEEccCCCc----------cccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822 247 KGKVIVIGVGVDA----------MVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 314 (335)
Q Consensus 247 ~G~~v~~g~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~ 314 (335)
|+++.+|..... ...++. ..+.+++++.+.....+. ..+.+..+++++.++.+.+....++.++++
T Consensus 231 -g~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (329)
T cd08250 231 -GRLIVIGFISGYQSGTGPSPVKGATLPP-KLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLE 308 (329)
T ss_pred -CeEEEEecccCCcccCcccccccccccH-HHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHH
Confidence 999999876431 012222 334578888887643221 123467788999999877643345568999
Q ss_pred hHHHHHHHhcCCCee-eEEEe
Q 019822 315 EIDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 315 ~~~ea~~~~~~~~~~-k~vi~ 334 (335)
++++|++.+.+++.. |++++
T Consensus 309 ~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 309 SVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHcCCCCceEEeC
Confidence 999999999877655 88764
No 101
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.2e-28 Score=220.65 Aligned_cols=249 Identities=22% Similarity=0.273 Sum_probs=202.9
Q ss_pred cccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecc
Q 019822 20 ILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 99 (335)
Q Consensus 20 p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 99 (335)
|.++| ||+ +|+|+++|+++..|++||+|+.. ..+
T Consensus 52 ~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~-----------------------------~~~--------------- 85 (305)
T cd08270 52 GAVPG-WDA-AGVVERAAADGSGPAVGARVVGL-----------------------------GAM--------------- 85 (305)
T ss_pred CCccc-cee-EEEEEEeCCCCCCCCCCCEEEEe-----------------------------cCC---------------
Confidence 56899 999 99999999999999999999642 112
Q ss_pred cccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEE
Q 019822 100 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKI 178 (335)
Q Consensus 100 ~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V 178 (335)
|+|++|+.++.+.++++|+++++++++++++.+.|||+++...... ++++|+|+|+ |++|.+++++|+..|+ +|
T Consensus 86 ---g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v 160 (305)
T cd08270 86 ---GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HV 160 (305)
T ss_pred ---cceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EE
Confidence 3899999999999999999999999999999999999988655444 6999999987 9999999999999999 89
Q ss_pred EEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822 179 IGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 179 ~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
+.+++++++.+.++++|++.++.... ++.+ .++|+++|++|+. .+..++++++.+ |+++.+|....
T Consensus 161 ~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~ 226 (305)
T cd08270 161 VAVVGSPARAEGLRELGAAEVVVGGS-----------ELSG-APVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSSG 226 (305)
T ss_pred EEEeCCHHHHHHHHHcCCcEEEeccc-----------cccC-CCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccCC
Confidence 99999999999999999876654322 1223 3799999999987 789999999998 99999987543
Q ss_pred ccccchhHHHhh--cCcEEEEeeccC-CCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEe
Q 019822 259 AMVPLNVIALAC--GGRTLKGTTFGG-IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 259 ~~~~~~~~~~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~ 334 (335)
....++...+.. ++.++.++.... ......+..+++++.++++++. +.+.++++++++|++.+.+++.. |++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 304 (305)
T cd08270 227 EPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLD 304 (305)
T ss_pred CcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 334455555543 588888876543 1113457788999999998754 66789999999999999877765 98887
Q ss_pred C
Q 019822 335 I 335 (335)
Q Consensus 335 ~ 335 (335)
+
T Consensus 305 ~ 305 (305)
T cd08270 305 V 305 (305)
T ss_pred C
Confidence 5
No 102
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.96 E-value=5.2e-28 Score=222.81 Aligned_cols=272 Identities=20% Similarity=0.248 Sum_probs=209.2
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...+.+ ...+|.++| ||+ +|+|+.+|++++.|++||+|+......|+ +...+
T Consensus 42 d~~~~~~~~-~~~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~---------------------~~~~~- 96 (339)
T cd08249 42 DWKHQDYGF-IPSYPAILG-CDF-AGTVVEVGSGVTRFKVGDRVAGFVHGGNP---------------------NDPRN- 96 (339)
T ss_pred heeeeeccc-ccCCCceee-eee-eEEEEEeCCCcCcCCCCCEEEEEeccccC---------------------CCCCC-
Confidence 444444433 123567899 999 99999999999999999999865432221 11112
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCC----------CCCCEEE
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV----------EKGSSVA 155 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~~~~Vl 155 (335)
|++++|+.++.+.++++|+++++++++.+++.+.|||+++.+..++ .++++||
T Consensus 97 -----------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vl 159 (339)
T cd08249 97 -----------------GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVL 159 (339)
T ss_pred -----------------CcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEE
Confidence 3899999999999999999999999999999999999988666544 7899999
Q ss_pred EEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822 156 VLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 234 (335)
Q Consensus 156 I~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~ 234 (335)
|+|+ |.+|++++++|+.+|+ +|+.+. ++++.+.++++|++++++++. .++.+.++++++ .++|+++|++|++.
T Consensus 160 I~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~-~~~d~vl~~~g~~~ 233 (339)
T cd08249 160 IWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATG-GKLRYALDCISTPE 233 (339)
T ss_pred EEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcC-CCeeEEEEeeccch
Confidence 9997 9999999999999999 888887 568999999999999998886 778888888776 48999999999855
Q ss_pred HHHHHHHhhcc--CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---------CCcCcHHHHHHHHhCCCCCC
Q 019822 235 LLSEALETTKV--GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---------KTKSDLPTLLDKCKNKEFKL 303 (335)
Q Consensus 235 ~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~i~~~~~~~ 303 (335)
.+..+++++++ + |+++.++...... .+. .+..+.......+ .....+..++++++++++.+
T Consensus 234 ~~~~~~~~l~~~~~-g~~v~~g~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (339)
T cd08249 234 SAQLCAEALGRSGG-GKLVSLLPVPEET-EPR------KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKP 305 (339)
T ss_pred HHHHHHHHHhccCC-CEEEEecCCCccc-cCC------CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccC
Confidence 88999999999 9 9999998765311 111 1222222111110 11234667888999998876
Q ss_pred CCceeEEee--chhHHHHHHHhcCCC-ee-eEEEeC
Q 019822 304 HQLLTHHVK--LEEIDKAIQLLKQPD-CV-KVLITI 335 (335)
Q Consensus 304 ~~~~~~~~~--l~~~~ea~~~~~~~~-~~-k~vi~~ 335 (335)
.+ ...++ ++++++|++.+.+++ .. |+++++
T Consensus 306 ~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 306 HP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 53 34567 999999999998877 54 998874
No 103
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.96 E-value=8.2e-28 Score=219.84 Aligned_cols=273 Identities=21% Similarity=0.242 Sum_probs=207.6
Q ss_pred EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|.++. ..+|.++| ||+ +|+|++ +++..|++||+|+..... .|...+
T Consensus 42 d~~~~~g~~~~~~~~~~~~g-~e~-~G~V~~--~~~~~~~~Gd~V~~~~~~-----------------------~~~~~~ 94 (323)
T TIGR02823 42 DALAITGKGGVVRSYPMIPG-IDA-AGTVVS--SEDPRFREGDEVIVTGYG-----------------------LGVSHD 94 (323)
T ss_pred HHHHHcCCCCCCCCCCccce-eee-EEEEEe--cCCCCCCCCCEEEEccCC-----------------------CCCCCC
Confidence 33444565533 34688999 999 999998 556789999999864311 121122
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh--cCCCCCC-EEEEEcC-C
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGS-SVAVLGL-G 160 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~-~VlI~G~-g 160 (335)
|++++|+.++++.++++|+++++++++++++.+.+|+.++... +.+.+++ +|||+|+ |
T Consensus 95 ------------------g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g 156 (323)
T TIGR02823 95 ------------------GGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATG 156 (323)
T ss_pred ------------------ccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCc
Confidence 3899999999999999999999999999998999998876433 4478898 9999997 9
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
.+|.+++++|+.+|+ +++++++++++.+.++++|++.+++.++ .+. .++.+..+ ++|+++||+|+. .+..++
T Consensus 157 ~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~-~~d~vld~~g~~-~~~~~~ 228 (323)
T TIGR02823 157 GVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKE-RWAGAVDTVGGH-TLANVL 228 (323)
T ss_pred HHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCC-CceEEEECccHH-HHHHHH
Confidence 999999999999999 8888888888889999999988888765 333 45555555 599999999987 678999
Q ss_pred HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ 317 (335)
++++++ |+++.+|.......+++...++.+++++.+........ ...+..+.+++..+.++. + .+.+++++++
T Consensus 229 ~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~ 304 (323)
T TIGR02823 229 AQLKYG-GAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELP 304 (323)
T ss_pred HHhCCC-CEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHH
Confidence 999997 99999997653334444455556889988865432111 112445556666776543 2 4589999999
Q ss_pred HHHHHhcCCCee-eEEEeC
Q 019822 318 KAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 318 ea~~~~~~~~~~-k~vi~~ 335 (335)
+||+.+.+++.. |++++.
T Consensus 305 ~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 305 EALEQILAGQHRGRTVVDV 323 (323)
T ss_pred HHHHHHhCCCccceEEEeC
Confidence 999999887765 888763
No 104
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.96 E-value=1.4e-27 Score=218.52 Aligned_cols=263 Identities=19% Similarity=0.204 Sum_probs=200.6
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++| +..|++||+|+..+.. .|...+
T Consensus 56 ~~~~~~g-~e~-~G~V~~~~--~~~~~~Gd~V~~~~~~-----------------------~~~~~~------------- 95 (326)
T cd08289 56 RYPFIPG-IDL-AGTVVESN--DPRFKPGDEVIVTSYD-----------------------LGVSHH------------- 95 (326)
T ss_pred CCCcCcc-cce-eEEEEEcC--CCCCCCCCEEEEcccc-----------------------cCCCCC-------------
Confidence 4588999 999 99999964 5679999999865321 122222
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc--CC-CCCCEEEEEcC-CHHHHHHHHHHHHc
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA--KV-EKGSSVAVLGL-GTVGLGAVDGARMH 173 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~~-~~~~~VlI~G~-g~vG~~ai~la~~~ 173 (335)
|+|++|+.++++.++++|+++++++++.+++.+.|||.++.... .. .++++|||+|+ |.+|.+++++|+.+
T Consensus 96 -----g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (326)
T cd08289 96 -----GGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL 170 (326)
T ss_pred -----CcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence 38999999999999999999999999999999999998875432 33 34789999987 99999999999999
Q ss_pred CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 174 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 174 G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
|+ +|+++++++++.+.++++|++++++.++ . ....+++++ +.++|+++|++|+. .+...+++++++ |+++.+
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~-~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~ 242 (326)
T cd08289 171 GY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLE-KQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVS 242 (326)
T ss_pred CC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhc-cCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEE
Confidence 99 8999999999999999999999988775 3 345566664 45899999999986 789999999998 999999
Q ss_pred ccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCC---CCceeEEeechhHHHHHHHhcCCCee-
Q 019822 254 GVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL---HQLLTHHVKLEEIDKAIQLLKQPDCV- 329 (335)
Q Consensus 254 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~ea~~~~~~~~~~- 329 (335)
|.......+++...++.+++++.+...... .......+++.+.+ .+.+ ...++++++++++++||+.+.+++..
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~g 320 (326)
T cd08289 243 GLTGGGEVETTVFPFILRGVNLLGIDSVEC-PMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTG 320 (326)
T ss_pred eecCCCCCCcchhhhhhccceEEEEEeEec-CchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccc
Confidence 976433344445566568899988753211 01122333333322 2221 12357899999999999999887765
Q ss_pred eEEEeC
Q 019822 330 KVLITI 335 (335)
Q Consensus 330 k~vi~~ 335 (335)
|+++++
T Consensus 321 kvvv~~ 326 (326)
T cd08289 321 RTVVKL 326 (326)
T ss_pred eEEEeC
Confidence 888764
No 105
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.96 E-value=6.6e-28 Score=217.73 Aligned_cols=267 Identities=19% Similarity=0.243 Sum_probs=211.2
Q ss_pred EeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822 9 SFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87 (335)
Q Consensus 9 ~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~ 87 (335)
...|.++. ..+|.++| ||+ +|+|+++|+++.+|++||+|+..... .+
T Consensus 26 ~~~~~~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~---------------------------~~--- 73 (303)
T cd08251 26 CVRGLYPTMPPYPFTPG-FEA-SGVVRAVGPHVTRLAVGDEVIAGTGE---------------------------SM--- 73 (303)
T ss_pred HHCCCCCCCCCCCCCcC-cee-eEEEEEECCCCCCCCCCCEEEEecCC---------------------------CC---
Confidence 34454443 35688999 999 99999999999999999999754210 11
Q ss_pred cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822 88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA 166 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a 166 (335)
|+|++|+.++++.++++|+++++++++.++..+.+||+++ +...+.++++++|+|+ |.+|+++
T Consensus 74 ---------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~ 137 (303)
T cd08251 74 ---------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMA 137 (303)
T ss_pred ---------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHH
Confidence 3899999999999999999999999999999999999987 5788999999999965 9999999
Q ss_pred HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822 167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246 (335)
Q Consensus 167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~ 246 (335)
+++++++|+ +|+++++++++.+.++++|++.+++... .++...+.++++++++|+++|++++. .....+++++++
T Consensus 138 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~ 212 (303)
T cd08251 138 VQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPG 212 (303)
T ss_pred HHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccC
Confidence 999999999 9999999999999999999999998876 67888888888888999999999765 778999999997
Q ss_pred CeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCC------CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822 247 KGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319 (335)
Q Consensus 247 ~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea 319 (335)
|+++.++.... ....+....+. ++..+....+.... ..+.+.++++++.++.+++. .++.+++++++++
T Consensus 213 -g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 288 (303)
T cd08251 213 -GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEA 288 (303)
T ss_pred -cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHH
Confidence 99999986542 22233333333 44444433221110 11346678888888886543 5678999999999
Q ss_pred HHHhcCCCee-eEE
Q 019822 320 IQLLKQPDCV-KVL 332 (335)
Q Consensus 320 ~~~~~~~~~~-k~v 332 (335)
++.+.+++.. |++
T Consensus 289 ~~~~~~~~~~~~iv 302 (303)
T cd08251 289 YRYLSDRENIGKVV 302 (303)
T ss_pred HHHHHhCCCcceEe
Confidence 9999877654 665
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.96 E-value=1.1e-27 Score=217.70 Aligned_cols=265 Identities=23% Similarity=0.270 Sum_probs=216.0
Q ss_pred ecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccc
Q 019822 11 ALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM 89 (335)
Q Consensus 11 ~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~ 89 (335)
.|.++. ..+|.++| ||+ +|+|+++|+++..+++||+|+.. ..+
T Consensus 48 ~~~~~~~~~~~~~~g-~e~-~G~v~~vg~~~~~~~~Gd~V~~~-----------------------------~~~----- 91 (323)
T cd05276 48 QGLYPPPPGASDILG-LEV-AGVVVAVGPGVTGWKVGDRVCAL-----------------------------LAG----- 91 (323)
T ss_pred CCCCCCCCCCCCccc-cee-EEEEEeeCCCCCCCCCCCEEEEe-----------------------------cCC-----
Confidence 344432 34678999 999 99999999999999999999643 112
Q ss_pred cccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHH
Q 019822 90 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVD 168 (335)
Q Consensus 90 ~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~ 168 (335)
|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+.++++|+|+|+ |.+|+++++
T Consensus 92 -------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~ 158 (323)
T cd05276 92 -------------GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ 158 (323)
T ss_pred -------------CceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence 289999999999999999999999999999999999999877788999999999996 999999999
Q ss_pred HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822 169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 248 (335)
Q Consensus 169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G 248 (335)
+++..|+ +|+++++++++.+.++++|++.+++... .++...+.+.+.++++|+++|++|+. .+...++++.++ |
T Consensus 159 ~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g 232 (323)
T cd05276 159 LAKALGA-RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-G 232 (323)
T ss_pred HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-C
Confidence 9999999 8999999999999999899888888776 67777888777777899999999987 578899999997 9
Q ss_pred EEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822 249 KVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321 (335)
Q Consensus 249 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~ 321 (335)
+++.++........++...++.+++++.++....... ...+.++++++.++++.+ ..++.+++++++++++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~ 310 (323)
T cd05276 233 RLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHR 310 (323)
T ss_pred EEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHH
Confidence 9999987543223455555556889999877544211 012456778888888654 3667899999999999
Q ss_pred HhcCCCee-eEE
Q 019822 322 LLKQPDCV-KVL 332 (335)
Q Consensus 322 ~~~~~~~~-k~v 332 (335)
.+.+++.. |++
T Consensus 311 ~~~~~~~~~kvv 322 (323)
T cd05276 311 RMESNEHIGKIV 322 (323)
T ss_pred HHHhCCCcceEe
Confidence 99876654 665
No 107
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=1.1e-27 Score=205.76 Aligned_cols=223 Identities=22% Similarity=0.258 Sum_probs=186.0
Q ss_pred cceeeEEecccceEEcCCCCCcccc--cccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE
Q 019822 104 TWSEYMVIDANYVVKVDPSIDPSDA--SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG 180 (335)
Q Consensus 104 ~~~~~~~v~~~~~~~lp~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~ 180 (335)
+|++|..++.+.+.+++++.-+-.+ ..+..+..|||.+|.+....++|++|+|.+| |++|..+.|+||..|+ +|++
T Consensus 102 GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVG 180 (340)
T COG2130 102 GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVG 180 (340)
T ss_pred cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEE
Confidence 7999999999999999866433332 2356688999999999999999999999986 9999999999999999 9999
Q ss_pred EcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-
Q 019822 181 IDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD- 258 (335)
Q Consensus 181 ~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~- 258 (335)
++.+++|.+++.+ +|.+.++||+. .++.+.+++..+. |+|+.||++|++ .++..+..|+.+ +|++.+|..+.
T Consensus 181 iaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~-GIDvyfeNVGg~-v~DAv~~~ln~~-aRi~~CG~IS~Y 254 (340)
T COG2130 181 IAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPK-GIDVYFENVGGE-VLDAVLPLLNLF-ARIPVCGAISQY 254 (340)
T ss_pred ecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCC-CeEEEEEcCCch-HHHHHHHhhccc-cceeeeeehhhc
Confidence 9999999999977 99999999999 8999999998875 999999999998 899999999997 99999997665
Q ss_pred ccc-----cchhHHHhhcCcEEEEeecc-CCCC--cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-
Q 019822 259 AMV-----PLNVIALACGGRTLKGTTFG-GIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV- 329 (335)
Q Consensus 259 ~~~-----~~~~~~~~~~~~~~~g~~~~-~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~- 329 (335)
... +-....++.+.+++.|+.+. .+.. .+..+++..++.+|++..+. +-+-.|+.+++||.-+.+++..
T Consensus 255 N~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~G 332 (340)
T COG2130 255 NAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFG 332 (340)
T ss_pred CCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccc
Confidence 111 12233455578899998873 3321 24567888999999988874 3344799999999999999876
Q ss_pred eEEEeC
Q 019822 330 KVLITI 335 (335)
Q Consensus 330 k~vi~~ 335 (335)
|+++++
T Consensus 333 K~vvKv 338 (340)
T COG2130 333 KLVVKV 338 (340)
T ss_pred eEEEEe
Confidence 998864
No 108
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.96 E-value=2.3e-27 Score=217.98 Aligned_cols=268 Identities=20% Similarity=0.193 Sum_probs=210.5
Q ss_pred ecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822 11 ALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90 (335)
Q Consensus 11 ~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~ 90 (335)
.|.++...+|.++| ||+ +|+|+++|+++..|++||+|+.... ...+
T Consensus 51 ~~~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------~~~~------ 96 (336)
T cd08252 51 AGGAPVPGQPKILG-WDA-SGVVEAVGSEVTLFKVGDEVYYAGD--------------------------ITRP------ 96 (336)
T ss_pred cCCCCCCCCCcccc-cce-EEEEEEcCCCCCCCCCCCEEEEcCC--------------------------CCCC------
Confidence 44444334677899 999 9999999999999999999975310 0012
Q ss_pred ccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCC-----CCEEEEEcC-CHHHH
Q 019822 91 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GTVGL 164 (335)
Q Consensus 91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~VlI~G~-g~vG~ 164 (335)
|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+.+.+.+ +++|+|+|+ |++|+
T Consensus 97 ------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~ 164 (336)
T cd08252 97 ------------GSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGS 164 (336)
T ss_pred ------------ccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHH
Confidence 389999999999999999999999999999999999999888888887 999999985 99999
Q ss_pred HHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822 165 GAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243 (335)
Q Consensus 165 ~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l 243 (335)
+++++|+.+| + +|+++++++++.+.++++|++++++++. ++...++.. .++++|+++|++++...+..+++++
T Consensus 165 ~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l 238 (336)
T cd08252 165 IAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ----DLAEQLEAL-GIEPVDYIFCLTDTDQHWDAMAELI 238 (336)
T ss_pred HHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----cHHHHHHhh-CCCCCCEEEEccCcHHHHHHHHHHh
Confidence 9999999999 7 9999999999999999999988888763 355556544 4458999999999766889999999
Q ss_pred ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---CC------cCcHHHHHHHHhCCCCCCCCc-eeEEeec
Q 019822 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---KT------KSDLPTLLDKCKNKEFKLHQL-LTHHVKL 313 (335)
Q Consensus 244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~------~~~~~~~~~~i~~~~~~~~~~-~~~~~~l 313 (335)
+.+ |+++.+|... ..++...+..+++++.+...... .. ...+..+++++.++.+.+... ..+.+++
T Consensus 239 ~~~-g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (336)
T cd08252 239 APQ-GHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA 314 (336)
T ss_pred cCC-CEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH
Confidence 997 9999998653 23444444457788877554321 00 123667889999998765311 1235799
Q ss_pred hhHHHHHHHhcCCCee-eEEEe
Q 019822 314 EEIDKAIQLLKQPDCV-KVLIT 334 (335)
Q Consensus 314 ~~~~ea~~~~~~~~~~-k~vi~ 334 (335)
+++++|++.+.+++.. |++++
T Consensus 315 ~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 315 ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHHcCCccceEEeC
Confidence 9999999999887765 77763
No 109
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.3e-27 Score=213.75 Aligned_cols=265 Identities=20% Similarity=0.265 Sum_probs=211.4
Q ss_pred EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
|++...|.++ .|.++| ||+ +|+|+++|+.+..|++||+|+...
T Consensus 13 d~~~~~g~~~---~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~-------------------------------- 55 (288)
T smart00829 13 DVLIALGLLP---GEAVLG-GEC-AGVVTRVGPGVTGLAVGDRVMGLA-------------------------------- 55 (288)
T ss_pred HHHHhcCCCC---CCCCCC-cee-EEEEEeeCCCCcCCCCCCEEEEEc--------------------------------
Confidence 3344445443 357899 999 999999999999999999997431
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
.|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.+...+.++++|+|+|+ |.+|+
T Consensus 56 ----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~ 119 (288)
T smart00829 56 ----------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQ 119 (288)
T ss_pred ----------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHH
Confidence 1389999999999999999999999999999999999998878888999999999985 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
+++++++..|+ +|+++++++++.+.++++|+ +.+++++. .++.+.+.+.++++++|+++|++++. .+...+++
T Consensus 120 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~ 194 (288)
T smart00829 120 AAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGE-FLDASLRC 194 (288)
T ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHh
Confidence 99999999999 89999999999999999998 77888776 66778888887777899999999965 77899999
Q ss_pred hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCC-----CcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822 243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK-----TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~ 316 (335)
++++ |+++.++.... ....++...+ .+++.+.+..+.... ....+..+++++.++++++. ..+.++++++
T Consensus 195 l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 270 (288)
T smart00829 195 LAPG-GRFVEIGKRDIRDNSQLGMAPF-RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDV 270 (288)
T ss_pred ccCC-cEEEEEcCcCCccccccchhhh-cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHH
Confidence 9997 99999986542 1223333332 356666665432111 11235678888888887653 4578999999
Q ss_pred HHHHHHhcCCCee-eEE
Q 019822 317 DKAIQLLKQPDCV-KVL 332 (335)
Q Consensus 317 ~ea~~~~~~~~~~-k~v 332 (335)
+++++.+..++.. |++
T Consensus 271 ~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 271 EDAFRYMQQGKHIGKVV 287 (288)
T ss_pred HHHHHHHhcCCCcceEe
Confidence 9999999887654 655
No 110
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.96 E-value=4.5e-27 Score=214.12 Aligned_cols=276 Identities=22% Similarity=0.267 Sum_probs=219.0
Q ss_pred EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-c
Q 019822 6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-L 83 (335)
Q Consensus 6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~ 83 (335)
|++...|.++. ...|.++| ||+ +|+|+++|+++..|++||+|+.... |+. .
T Consensus 43 d~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~~g~~~~~~~~Gd~v~~~~~-------------------------~~~~~ 95 (325)
T cd08253 43 DTYIRAGAYPGLPPLPYVPG-SDG-AGVVEAVGEGVDGLKVGDRVWLTNL-------------------------GWGRR 95 (325)
T ss_pred HhhhccCCCCCCCCCCeecc-cce-EEEEEeeCCCCCCCCCCCEEEEecc-------------------------ccCCC
Confidence 34444555432 34678999 999 9999999999999999999986532 100 1
Q ss_pred CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822 84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV 162 (335)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v 162 (335)
. |++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++++|+|+ |.+
T Consensus 96 ~------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~ 157 (325)
T cd08253 96 Q------------------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAV 157 (325)
T ss_pred C------------------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchH
Confidence 1 389999999999999999999999999999999999999887789999999999986 999
Q ss_pred HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242 (335)
Q Consensus 163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~ 242 (335)
|++++++++..|+ +|+++++++++.+.++++|++++++.+. .++...+++++.++++|+++|++++. .....+++
T Consensus 158 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~ 232 (325)
T cd08253 158 GHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDV 232 (325)
T ss_pred HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHh
Confidence 9999999999999 9999999999999999999988888776 66777888877777999999999987 67888999
Q ss_pred hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319 (335)
Q Consensus 243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea 319 (335)
++.+ |+++.++... ...+++...++.++..+.+........ ...+..+.+++.++.++.. .++.+++++++++
T Consensus 233 l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~ 308 (325)
T cd08253 233 LAPG-GRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAA 308 (325)
T ss_pred hCCC-CEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHH
Confidence 9997 9999998754 233444455455777777765332110 1224455667777776543 5678999999999
Q ss_pred HHHhcCCCee-eEEEeC
Q 019822 320 IQLLKQPDCV-KVLITI 335 (335)
Q Consensus 320 ~~~~~~~~~~-k~vi~~ 335 (335)
++.+.+++.. |+++++
T Consensus 309 ~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 309 HEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHcCCCcceEEEeC
Confidence 9999877665 888763
No 111
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=3.4e-27 Score=215.03 Aligned_cols=260 Identities=21% Similarity=0.283 Sum_probs=214.6
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+.+|+++..+++||+|+.. ..+
T Consensus 56 ~~~~~~g-~e~-~G~v~~vg~~~~~~~~Gd~V~~~-----------------------------~~~------------- 91 (325)
T TIGR02824 56 GASDILG-LEV-AGEVVAVGEGVSRWKVGDRVCAL-----------------------------VAG------------- 91 (325)
T ss_pred CCCCCcc-cee-EEEEEEeCCCCCCCCCCCEEEEc-----------------------------cCC-------------
Confidence 3568999 999 99999999999999999999642 111
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
|++++|+.++...++++|+++++..++.++.++.++|+++.+...+.++++++|+|+ |.+|.+++++++.+|+
T Consensus 92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~- 165 (325)
T TIGR02824 92 -----GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA- 165 (325)
T ss_pred -----CcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence 289999999999999999999999999999999999998888889999999999986 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|+++.+++++.+.++++|++.+++... .++...+++...++++|+++|++++. .+..++++++++ |+++.++..
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~ 240 (325)
T TIGR02824 166 RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQ 240 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecC
Confidence 9999999999999898899888887765 66777888877777899999999976 678899999997 999999875
Q ss_pred CCccccchhHHHhhcCcEEEEeeccCC-CC------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee
Q 019822 257 VDAMVPLNVIALACGGRTLKGTTFGGI-KT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329 (335)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~ 329 (335)
......++...++.+++++.+...... .. ...+..++++++++.+.+. .++.+++++++++++.+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~ 318 (325)
T TIGR02824 241 GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHI 318 (325)
T ss_pred CCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCc
Confidence 432225555556579999998875442 11 1123456778888886543 66789999999999998877655
Q ss_pred -eEEEe
Q 019822 330 -KVLIT 334 (335)
Q Consensus 330 -k~vi~ 334 (335)
|++++
T Consensus 319 ~~~v~~ 324 (325)
T TIGR02824 319 GKIVLT 324 (325)
T ss_pred ceEEEe
Confidence 88875
No 112
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.1e-26 Score=212.00 Aligned_cols=276 Identities=24% Similarity=0.303 Sum_probs=216.8
Q ss_pred EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++...|.++. ..+|.++| ||+ +|+|+.+|+++..|++||+|+..+.. +...+
T Consensus 44 ~~~~~~~~~~~~~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~~------------------------~~~~~- 96 (328)
T cd08268 44 AMFRRGAYIEPPPLPARLG-YEA-AGVVEAVGAGVTGFAVGDRVSVIPAA------------------------DLGQY- 96 (328)
T ss_pred hheeccccCCCCCCCCCCC-cce-EEEEEeeCCCCCcCCCCCEEEecccc------------------------ccCCC-
Confidence 3334444432 24477899 999 99999999999999999999764321 11111
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~ 164 (335)
|++++|+.++.+.++++|+++++++++.+++.+.++|+++.....+.++++++|+|+ |.+|+
T Consensus 97 -----------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~ 159 (328)
T cd08268 97 -----------------GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL 159 (328)
T ss_pred -----------------ccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence 389999999999999999999999999999999999999888888999999999987 99999
Q ss_pred HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244 (335)
Q Consensus 165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~ 244 (335)
+++++++..|+ +++.+++++++.+.++++|++.+++.+. ..+...+.+.+.++++|++++++++. ....++++++
T Consensus 160 ~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 234 (328)
T cd08268 160 AAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALA 234 (328)
T ss_pred HHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhc
Confidence 99999999999 9999999999999998899888888776 66777787777777899999999986 7789999999
Q ss_pred cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC-CcCc----HHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-TKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319 (335)
Q Consensus 245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~----~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea 319 (335)
++ |+++.+|........++....+.+++.+.+....... .+.+ +..+.+++.++.+.+. .++.++++++.++
T Consensus 235 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 311 (328)
T cd08268 235 PG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEA 311 (328)
T ss_pred cC-CEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHH
Confidence 97 9999998654322334444345588888887654321 1122 3345555667775543 5678999999999
Q ss_pred HHHhcCCCee-eEEEe
Q 019822 320 IQLLKQPDCV-KVLIT 334 (335)
Q Consensus 320 ~~~~~~~~~~-k~vi~ 334 (335)
++.+.+++.. |++++
T Consensus 312 ~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 312 HRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHHcCCCCceEEEe
Confidence 9998877654 88875
No 113
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=7.1e-27 Score=209.24 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=208.5
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|+++..|++||+|+...
T Consensus 26 ~~~~~~g-~e~-~G~v~~~g~~~~~~~~Gd~V~~~~-------------------------------------------- 59 (293)
T cd05195 26 GDETPLG-LEC-SGIVTRVGSGVTGLKVGDRVMGLA-------------------------------------------- 59 (293)
T ss_pred CCCCccc-eee-eEEEEeecCCccCCCCCCEEEEEe--------------------------------------------
Confidence 3578999 999 999999999999999999997531
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
.|+|++|+.++.+.++++|+++++.+++.+++++.+++.++.+...+.++++|+|+|+ |.+|++++++++.+|+
T Consensus 60 ----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~- 134 (293)
T cd05195 60 ----PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA- 134 (293)
T ss_pred ----cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-
Confidence 1389999999999999999999999999998899999999878788999999999975 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcC--CceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 177 KIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
+|+++++++++.+.+++++ ++.+++++. .++.+.+++.+.++++|+++|++++. .+..++++++++ |+++.++
T Consensus 135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g 209 (293)
T cd05195 135 EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPF-GRFVEIG 209 (293)
T ss_pred EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccC-ceEEEee
Confidence 8999998889999998888 678888776 67888888888788999999999988 789999999997 9999998
Q ss_pred cCCC-ccccchhHHHhhcCcEEEEeeccCCC--C----cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822 255 VGVD-AMVPLNVIALACGGRTLKGTTFGGIK--T----KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327 (335)
Q Consensus 255 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~--~----~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~ 327 (335)
.... ....+....+. +++.+....+.... . .+.+..+++++.++++. +..++.+++++++++++.+.+++
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~ 286 (293)
T cd05195 210 KRDILSNSKLGMRPFL-RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGK 286 (293)
T ss_pred ccccccCCccchhhhc-cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCC
Confidence 7553 11223333322 55666654432211 0 12456788888888865 34567899999999999998776
Q ss_pred ee-eEE
Q 019822 328 CV-KVL 332 (335)
Q Consensus 328 ~~-k~v 332 (335)
.. |++
T Consensus 287 ~~~~iv 292 (293)
T cd05195 287 HIGKVV 292 (293)
T ss_pred CCceec
Confidence 54 665
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.95 E-value=1.5e-26 Score=212.06 Aligned_cols=251 Identities=23% Similarity=0.236 Sum_probs=202.8
Q ss_pred cccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecc
Q 019822 20 ILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 99 (335)
Q Consensus 20 p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 99 (335)
+.++| +|+ +|+|+++|++ .|++||+|+..
T Consensus 65 ~~~~g-~e~-~G~V~~~G~~--~~~~Gd~V~~~----------------------------------------------- 93 (329)
T cd05288 65 GEPMR-GGG-VGEVVESRSP--DFKVGDLVSGF----------------------------------------------- 93 (329)
T ss_pred CCccc-Cce-EEEEEecCCC--CCCCCCEEecc-----------------------------------------------
Confidence 56789 999 9999999964 79999999632
Q ss_pred cccccceeeEEecc-cceEEcCCCCC--cccccc-cccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcC
Q 019822 100 FSCSTWSEYMVIDA-NYVVKVDPSID--PSDASF-LSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHG 174 (335)
Q Consensus 100 ~~~g~~~~~~~v~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G 174 (335)
++|++|+.+++ +.++++|++++ +.++++ +++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..|
T Consensus 94 ---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G 170 (329)
T cd05288 94 ---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLG 170 (329)
T ss_pred ---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcC
Confidence 16999999999 99999999985 445545 88899999999877788999999999985 999999999999999
Q ss_pred CCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 175 AAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 175 ~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
+ +|+++++++++.+.+++ +|+++++++++ .++...+.++++ +++|+++|++|+. .+..++++++++ |+++.+
T Consensus 171 ~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~-~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~ 243 (329)
T cd05288 171 A-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAP-DGIDVYFDNVGGE-ILDAALTLLNKG-GRIALC 243 (329)
T ss_pred C-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhcc-CCceEEEEcchHH-HHHHHHHhcCCC-ceEEEE
Confidence 9 99999999999999988 99999998886 677778887775 5899999999986 789999999997 999999
Q ss_pred ccCCCccc-----cchhHHHhhcCcEEEEeeccCCCC--cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCC
Q 019822 254 GVGVDAMV-----PLNVIALACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326 (335)
Q Consensus 254 g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~ 326 (335)
|....... .++......+++++.+........ .+.+..+++++.++.+++.+ ...+++++++++++.+.++
T Consensus 244 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~ 321 (329)
T cd05288 244 GAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTG 321 (329)
T ss_pred eeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcC
Confidence 86543111 122344456888888776433211 13467788999999987653 3458999999999999877
Q ss_pred Cee-eEEE
Q 019822 327 DCV-KVLI 333 (335)
Q Consensus 327 ~~~-k~vi 333 (335)
+.. |+++
T Consensus 322 ~~~gkvvv 329 (329)
T cd05288 322 KNTGKLVV 329 (329)
T ss_pred CCccceeC
Confidence 654 6653
No 115
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.95 E-value=2.8e-26 Score=212.38 Aligned_cols=264 Identities=21% Similarity=0.200 Sum_probs=195.2
Q ss_pred ccccccccccceEEEEEeCCCCC-cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 19 FILVFSGTKVSGKVVESAGDEVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.|.++| ||+ +|+|+++|++++ .|++||+|+......|+ .
T Consensus 58 ~~~~~g-~e~-~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~------------------------~-------------- 97 (352)
T cd08247 58 KEKGLG-RDY-SGVIVKVGSNVASEWKVGDEVCGIYPHPYG------------------------G-------------- 97 (352)
T ss_pred CCCccC-cee-EEEEEEeCcccccCCCCCCEEEEeecCCCC------------------------C--------------
Confidence 377899 999 999999999998 89999999865322110 1
Q ss_pred cccccccceeeEEeccc----ceEEcCCCCCcccccccccchhhhhHHHHHhc-CCCCCCEEEEEcC-CHHHHHHHHHHH
Q 019822 98 HIFSCSTWSEYMVIDAN----YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGL-GTVGLGAVDGAR 171 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~-g~vG~~ai~la~ 171 (335)
.|+|++|++++.. .++++|+++++++++.+++.+.|||+++.+.. .+.++++|+|+|+ +.+|.+++++|+
T Consensus 98 ----~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~ 173 (352)
T cd08247 98 ----QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK 173 (352)
T ss_pred ----CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence 2489999999987 79999999999999999999999999987666 7999999999987 899999999999
Q ss_pred HcCC-CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchh---HHHHH-HhhhCCCCccEEEEcCCChHHHHHHHHhhc--
Q 019822 172 MHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS---ISELV-KGITHGMGVDYCFECTGVPSLLSEALETTK-- 244 (335)
Q Consensus 172 ~~G~-~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~---~~~~i-~~~~~g~g~d~vid~~g~~~~~~~~~~~l~-- 244 (335)
.+|. +.|+.+. ++++.+.++++|++++++.++ .+ +...+ +..++++++|++|||+|+......++++++
T Consensus 174 ~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~ 249 (352)
T cd08247 174 NHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPK 249 (352)
T ss_pred hcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCcc
Confidence 8854 3677776 456666788999999998776 44 44444 444436699999999998557789999999
Q ss_pred -cCCeEEEEEccCCCcccc-----------chhHHHh----hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCcee
Q 019822 245 -VGKGKVIVIGVGVDAMVP-----------LNVIALA----CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT 308 (335)
Q Consensus 245 -~~~G~~v~~g~~~~~~~~-----------~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 308 (335)
++ |+++.++........ +....+. .+...+..... . ...+.+..+++++.++.+.+ ..+
T Consensus 250 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~--~~~ 324 (352)
T cd08247 250 SKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL-D-PNADWIEKCAELIADGKVKP--PID 324 (352)
T ss_pred CCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEe-c-CCHHHHHHHHHHHhCCCeEe--eec
Confidence 97 999987532211111 0011111 12222221110 0 01234677889999998653 366
Q ss_pred EEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822 309 HHVKLEEIDKAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 309 ~~~~l~~~~ea~~~~~~~~~~-k~vi~~ 335 (335)
+.++++++++|++.+.+++.. |+++++
T Consensus 325 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 325 SVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred cEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 789999999999999887754 888764
No 116
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=4.6e-28 Score=235.55 Aligned_cols=265 Identities=18% Similarity=0.222 Sum_probs=219.4
Q ss_pred EEEeEeecCCCCCCcc-------ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc
Q 019822 5 VTLISFALKDSQRLFI-------LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA 77 (335)
Q Consensus 5 ~d~~~~~g~~~~~~~p-------~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~ 77 (335)
.|+....|+.+....| .++| -|| +|+ .+-|.||
T Consensus 1459 RDiMLasGkL~~DAiPG~~a~qdclLG-mEF-sGR----------d~~GrRv---------------------------- 1498 (2376)
T KOG1202|consen 1459 RDIMLASGKLSPDAIPGDLASQDCLLG-MEF-SGR----------DASGRRV---------------------------- 1498 (2376)
T ss_pred HHHHHhcCCCCcccCCCccchhhheec-eee-ccc----------cCCCcEE----------------------------
Confidence 4666667877654333 6788 888 776 4568899
Q ss_pred ccccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822 78 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL 157 (335)
Q Consensus 78 ~~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~ 157 (335)
+|+.+.. ++++-+.++.+++|.+|.+.++++|++.++.|+|+|++|+.+...++|++|||+
T Consensus 1499 -M~mvpAk------------------sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIH 1559 (2376)
T KOG1202|consen 1499 -MGMVPAK------------------SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIH 1559 (2376)
T ss_pred -EEeeehh------------------hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEe
Confidence 4555544 799999999999999999999999999999999999999999999999999999
Q ss_pred -cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c---CCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822 158 -GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F---GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 232 (335)
Q Consensus 158 -G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l---ga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~ 232 (335)
|+|++|++||.+|.+.|+ +|+.+..|+||++++.+ | -.+++-|+++ .+|..-+++.|.|+|+|+|+++...
T Consensus 1560 aGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLae 1635 (2376)
T KOG1202|consen 1560 AGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAE 1635 (2376)
T ss_pred cCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhH
Confidence 569999999999999999 99999999999999854 3 3556677887 8899999999999999999999988
Q ss_pred hHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCC--CCCce
Q 019822 233 PSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFK--LHQLL 307 (335)
Q Consensus 233 ~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~--~~~~~ 307 (335)
+ -++..++||+.. ||+..+|...- ...++.+.-+. +|.+++|...-+.. ..+.+.++..++++|.-. ..++.
T Consensus 1636 E-kLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfL-kNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ 1712 (2376)
T KOG1202|consen 1636 E-KLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFL-KNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLP 1712 (2376)
T ss_pred H-HHHHHHHHHHhc-CeeeeecceecccCCcchhhhhh-cccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccc
Confidence 7 689999999997 99999997655 45566666555 99999998765442 234466677776655322 55667
Q ss_pred eEEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822 308 THHVKLEEIDKAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 308 ~~~~~l~~~~ea~~~~~~~~~~-k~vi~~ 335 (335)
+++|+-.++++||+.|.+++++ |||+++
T Consensus 1713 ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1713 TTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred cccccHHHHHHHHHHHhccCccceEEEEE
Confidence 8899999999999999999987 999863
No 117
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=3e-26 Score=209.08 Aligned_cols=260 Identities=24% Similarity=0.266 Sum_probs=209.6
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
..|.++| ||+ +|+|+++|+++..|++||+|+.... |+..
T Consensus 56 ~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~-------------- 94 (326)
T cd08272 56 PLPAILG-CDV-AGVVEAVGEGVTRFRVGDEVYGCAG-------------------------GLGG-------------- 94 (326)
T ss_pred CCCcccc-cce-eEEEEEeCCCCCCCCCCCEEEEccC-------------------------CcCC--------------
Confidence 3577899 999 9999999999999999999975421 1110
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
..|++++|+.++..+++++|+++++..++.++..+.+||+++.+..++.++++++|+|+ |.+|++++++++.+|+
T Consensus 95 ---~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~- 170 (326)
T cd08272 95 ---LQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA- 170 (326)
T ss_pred ---CCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-
Confidence 12489999999999999999999999999999899999999888899999999999985 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|++++++ ++.+.++++|++.+++... . +...+++.++++++|+++|++++. .....+++++++ |+++.++..
T Consensus 171 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~ 243 (326)
T cd08272 171 RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGG 243 (326)
T ss_pred EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecC
Confidence 89999987 8888999999988888775 5 777888888888999999999986 678899999997 999999765
Q ss_pred CCccccchhHHHhhcCcEEEEeeccC--CC------CcCcHHHHHHHHhCCCCCCCCcee-EEeechhHHHHHHHhcCCC
Q 019822 257 VDAMVPLNVIALACGGRTLKGTTFGG--IK------TKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPD 327 (335)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~--~~------~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~~~ea~~~~~~~~ 327 (335)
. ..++. ....+++.+.+..... .. ....+..+++++.++.+... ++ +.+++++++++++.+.+++
T Consensus 244 ~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~ 317 (326)
T cd08272 244 A--THDLA--PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGS 317 (326)
T ss_pred C--ccchh--hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCC
Confidence 3 22222 2234777777665322 10 12346678888888886543 33 7899999999999988766
Q ss_pred ee-eEEEeC
Q 019822 328 CV-KVLITI 335 (335)
Q Consensus 328 ~~-k~vi~~ 335 (335)
.. |+++++
T Consensus 318 ~~~~vv~~~ 326 (326)
T cd08272 318 ARGKIVIDV 326 (326)
T ss_pred cccEEEEEC
Confidence 54 888764
No 118
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=3.2e-26 Score=208.97 Aligned_cols=258 Identities=25% Similarity=0.330 Sum_probs=203.1
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 98 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~ 98 (335)
.|.++| ||+ +|+|+.+|++++.+++||+|+.... +..+
T Consensus 56 ~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------------~~~~-------------- 93 (325)
T cd08271 56 YPHVPG-VDG-AGVVVAVGAKVTGWKVGDRVAYHAS--------------------------LARG-------------- 93 (325)
T ss_pred CCcccc-cce-EEEEEEeCCCCCcCCCCCEEEeccC--------------------------CCCC--------------
Confidence 367899 999 9999999999999999999976421 1112
Q ss_pred ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822 99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~ 177 (335)
|++++|+.++.+.++++|+++++.+++.+.+.+.++++++.+..++.++++++|+|+ |.+|++++++++..|+ +
T Consensus 94 ----~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~ 168 (325)
T cd08271 94 ----GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R 168 (325)
T ss_pred ----ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence 289999999999999999999999999999999999999888888999999999997 8999999999999999 8
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+.+. ++++.+.++++|++.+++.+. .++...+++.+.++++|++++++++. .....++++++. |+++.++...
T Consensus 169 v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~ 242 (325)
T cd08271 169 VITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRP 242 (325)
T ss_pred EEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCC
Confidence 88877 678888888899988888776 66777888887777999999999987 557789999997 9999997554
Q ss_pred CccccchhHHHhhcCcEEEEeeccCC----------CCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822 258 DAMVPLNVIALACGGRTLKGTTFGGI----------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327 (335)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~ 327 (335)
... . ...+ .+++.+....+... ...+.+..++++++++.+.+. .++.++++++.++++.+.+++
T Consensus 243 ~~~-~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~ 316 (325)
T cd08271 243 DAS-P--DPPF-TRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRH 316 (325)
T ss_pred CCc-c--hhHH-hhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCC
Confidence 211 1 1111 13333333222111 011234668888888886543 457899999999999998776
Q ss_pred ee-eEEEeC
Q 019822 328 CV-KVLITI 335 (335)
Q Consensus 328 ~~-k~vi~~ 335 (335)
.. |+++++
T Consensus 317 ~~~kiv~~~ 325 (325)
T cd08271 317 TRGKIVVTI 325 (325)
T ss_pred ccceEEEEC
Confidence 55 888764
No 119
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.95 E-value=7.7e-26 Score=206.84 Aligned_cols=272 Identities=19% Similarity=0.223 Sum_probs=203.8
Q ss_pred EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822 7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85 (335)
Q Consensus 7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g 85 (335)
++.+.|.++. ..+|.++| ||+ +|+|++ +++..+++||+|+..... .+...+
T Consensus 44 ~~~~~g~~~~~~~~~~~~g-~e~-~G~V~~--~~~~~~~~Gd~V~~~~~~-----------------------~~~~~~- 95 (324)
T cd08288 44 GLAITGKGGIVRTFPLVPG-IDL-AGTVVE--SSSPRFKPGDRVVLTGWG-----------------------VGERHW- 95 (324)
T ss_pred HHHhcCCccccCCCCCccc-cce-EEEEEe--CCCCCCCCCCEEEECCcc-----------------------CCCCCC-
Confidence 3333444422 23578899 999 999998 777789999999863210 011112
Q ss_pred CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHH--HhcCCC-CCCEEEEEcC-CH
Q 019822 86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW--KEAKVE-KGSSVAVLGL-GT 161 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~-~~~~VlI~G~-g~ 161 (335)
|+|++|+.++++.++++|+++++++++.++..+++++.++. +..+.. ++++|||+|+ |+
T Consensus 96 -----------------g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~ 158 (324)
T cd08288 96 -----------------GGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG 158 (324)
T ss_pred -----------------CcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence 38999999999999999999999999999988999887653 224445 5789999997 99
Q ss_pred HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241 (335)
Q Consensus 162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~ 241 (335)
+|.+++++|+.+|+ +|++++.++++.+.++++|+++++++++ .. ..++.++.+ ++|.++|++++. .+...+.
T Consensus 159 vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~--~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~ 230 (324)
T cd08288 159 VGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE---LS--EPGRPLQKE-RWAGAVDTVGGH-TLANVLA 230 (324)
T ss_pred HHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch---hh--HhhhhhccC-cccEEEECCcHH-HHHHHHH
Confidence 99999999999999 8999998999999999999999998875 22 245555554 689999999975 5678888
Q ss_pred hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 318 (335)
Q Consensus 242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e 318 (335)
.+..+ |+++.+|.......+.+...+..+++++.+........ .+.+..+.+++.++.+.+ +++.++++++++
T Consensus 231 ~~~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~ 306 (324)
T cd08288 231 QTRYG-GAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPD 306 (324)
T ss_pred HhcCC-CEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHH
Confidence 88887 99999987532223344455546899999875322211 123555667777777543 357899999999
Q ss_pred HHHHhcCCCee-eEEEeC
Q 019822 319 AIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 319 a~~~~~~~~~~-k~vi~~ 335 (335)
|++.+.+++.. |+++++
T Consensus 307 a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 307 AAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHhcCCccCeEEEeC
Confidence 99999887765 888764
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=7.9e-26 Score=205.72 Aligned_cols=258 Identities=26% Similarity=0.403 Sum_probs=211.8
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 98 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~ 98 (335)
.|.++| ||+ +|+|+.+|+++..+++||+|+... ..
T Consensus 57 ~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~-----------------------------~~-------------- 91 (323)
T cd08241 57 LPFVPG-SEV-AGVVEAVGEGVTGFKVGDRVVALT-----------------------------GQ-------------- 91 (323)
T ss_pred CCCccc-cee-EEEEEEeCCCCCCCCCCCEEEEec-----------------------------CC--------------
Confidence 366899 999 999999999999999999997532 11
Q ss_pred ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822 99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~ 177 (335)
|++++|+.++.+.++++|+++++.+++.+...+.+|++++.+...+.++++|+|+|+ |.+|++++++++..|+ +
T Consensus 92 ----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~ 166 (323)
T cd08241 92 ----GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-R 166 (323)
T ss_pred ----ceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-E
Confidence 279999999999999999999998888888899999998877788999999999997 9999999999999999 8
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
|+++++++++.+.++++|++.+++... .++...+.+.++++++|+++|++|+. .+..++++++++ |+++.++...
T Consensus 167 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~~~~~ 241 (323)
T cd08241 167 VIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIGFAS 241 (323)
T ss_pred EEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC-CEEEEEccCC
Confidence 999999999999999999888888776 67778888888877899999999985 778999999997 9999998754
Q ss_pred CccccchhHHHhhcCcEEEEeeccCCCC------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-e
Q 019822 258 DAMVPLNVIALACGGRTLKGTTFGGIKT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-K 330 (335)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k 330 (335)
.....+.......+++++.+.....+.. ...+..+++++.++.+.+ ..++.+++++++++++.+.+++.. |
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (323)
T cd08241 242 GEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGK 319 (323)
T ss_pred CCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCc
Confidence 3111133333455888888876544321 134567888898888653 366789999999999988876654 7
Q ss_pred EEE
Q 019822 331 VLI 333 (335)
Q Consensus 331 ~vi 333 (335)
+++
T Consensus 320 vvv 322 (323)
T cd08241 320 VVL 322 (323)
T ss_pred EEe
Confidence 765
No 121
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.94 E-value=9.6e-26 Score=208.44 Aligned_cols=256 Identities=21% Similarity=0.214 Sum_probs=195.5
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+++|+++.+|++||+|+..+. ...
T Consensus 72 ~~p~~~G-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------~~~-------------- 109 (350)
T cd08248 72 EFPLTLG-RDC-SGVVVDIGSGVKSFEIGDEVWGAVP--------------------------PWS-------------- 109 (350)
T ss_pred CCCeeec-cee-EEEEEecCCCcccCCCCCEEEEecC--------------------------CCC--------------
Confidence 4588999 999 9999999999999999999975421 011
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCC----CCEEEEEcC-CHHHHHHHHHHHH
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK----GSSVAVLGL-GTVGLGAVDGARM 172 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----~~~VlI~G~-g~vG~~ai~la~~ 172 (335)
.|+|++|+.++++.++++|++++++.++.+++.+.|||+++.+...+.+ +++|+|+|+ |++|++++++|+.
T Consensus 110 ----~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~ 185 (350)
T cd08248 110 ----QGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKA 185 (350)
T ss_pred ----CccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHH
Confidence 1389999999999999999999999999999999999998877777654 999999986 9999999999999
Q ss_pred cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEE
Q 019822 173 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 252 (335)
Q Consensus 173 ~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 252 (335)
+|+ +|+++.++ ++.+.++++|++++++.+. .++...+.. +.++|+++|++|++ .+..++++++++ |+++.
T Consensus 186 ~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~---~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~ 255 (350)
T cd08248 186 WGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTE---RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVT 255 (350)
T ss_pred CCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHh---cCCCCEEEECCChH-HHHHHHHHhccC-CEEEE
Confidence 999 88888754 6778889999988888765 455554443 35899999999987 789999999997 99999
Q ss_pred EccCCC---ccccc---------hhHHHhhc----CcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822 253 IGVGVD---AMVPL---------NVIALACG----GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316 (335)
Q Consensus 253 ~g~~~~---~~~~~---------~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~ 316 (335)
++.... ....+ ....+..+ ...+.... .. .....+..+++++.++.+.+ .+++.++++++
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~ 331 (350)
T cd08248 256 LVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF-FS-PSGSALDELAKLVEDGKIKP--VIDKVFPFEEV 331 (350)
T ss_pred ecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE-EC-CCHHHHHHHHHHHhCCCEec--ccceeecHHHH
Confidence 985432 11111 00111000 11010000 01 12346788999999998654 36788999999
Q ss_pred HHHHHHhcCCCee-eEEE
Q 019822 317 DKAIQLLKQPDCV-KVLI 333 (335)
Q Consensus 317 ~ea~~~~~~~~~~-k~vi 333 (335)
+++++.+.+++.. |+++
T Consensus 332 ~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 332 PEAYEKVESGHARGKTVI 349 (350)
T ss_pred HHHHHHHhcCCCceEEEe
Confidence 9999998877654 7775
No 122
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=9e-26 Score=206.93 Aligned_cols=263 Identities=22% Similarity=0.262 Sum_probs=198.6
Q ss_pred EeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822 9 SFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87 (335)
Q Consensus 9 ~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~ 87 (335)
...|.++. ..+|.++| ||+ +|+|+++|+++..|++||+|.... ..
T Consensus 46 ~~~g~~~~~~~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~-----------------------------~~--- 91 (331)
T cd08273 46 MRRGLYPDQPPLPFTPG-YDL-VGRVDALGSGVTGFEVGDRVAALT-----------------------------RV--- 91 (331)
T ss_pred HhCCCCCCCCCCCcccc-cce-EEEEEEeCCCCccCCCCCEEEEeC-----------------------------CC---
Confidence 33454433 24678999 999 999999999999999999997532 11
Q ss_pred cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822 88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA 166 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a 166 (335)
|++++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.++++|+|+|+ |.+|+++
T Consensus 92 ---------------g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~ 156 (331)
T cd08273 92 ---------------GGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQAL 156 (331)
T ss_pred ---------------cceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHH
Confidence 289999999999999999999999999999999999999877788999999999987 9999999
Q ss_pred HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822 167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246 (335)
Q Consensus 167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~ 246 (335)
+++|+..|+ +|+.++. +++.+.++++|+.. ++.+. .++... +..+ +++|+++|++++. .+..++++++.+
T Consensus 157 ~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~-~~~d~vl~~~~~~-~~~~~~~~l~~~ 226 (331)
T cd08273 157 LELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTP-GGVDVVFDGVGGE-SYEESYAALAPG 226 (331)
T ss_pred HHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccC-CCceEEEECCchH-HHHHHHHHhcCC
Confidence 999999999 8999987 88888889999754 44443 344333 3333 3899999999988 478999999997
Q ss_pred CeEEEEEccCCC-cc--ccchhH------------HHhhcCcEEEEeeccCC----CCcCcHHHHHHHHhCCCCCCCCce
Q 019822 247 KGKVIVIGVGVD-AM--VPLNVI------------ALACGGRTLKGTTFGGI----KTKSDLPTLLDKCKNKEFKLHQLL 307 (335)
Q Consensus 247 ~G~~v~~g~~~~-~~--~~~~~~------------~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~ 307 (335)
|+++.+|.... .. .++++. ....++..+........ ...+.+..+++++.++.+.+ .+
T Consensus 227 -g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~ 303 (331)
T cd08273 227 -GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KI 303 (331)
T ss_pred -CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--Cc
Confidence 99999987654 11 111110 11112223322221000 01245778889999998764 36
Q ss_pred eEEeechhHHHHHHHhcCCCee-eEEE
Q 019822 308 THHVKLEEIDKAIQLLKQPDCV-KVLI 333 (335)
Q Consensus 308 ~~~~~l~~~~ea~~~~~~~~~~-k~vi 333 (335)
++.+++++++++++.+.+++.. |+++
T Consensus 304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 304 AKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 6789999999999998877654 6664
No 123
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=3.9e-25 Score=202.87 Aligned_cols=259 Identities=22% Similarity=0.287 Sum_probs=206.0
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
..|.++| ||+ +|+|+.+|+++.++++||+|+... .+
T Consensus 55 ~~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~-----------------------------~~------------- 90 (337)
T cd08275 55 KPPFVPG-FEC-AGTVEAVGEGVKDFKVGDRVMGLT-----------------------------RF------------- 90 (337)
T ss_pred CCCCCCc-cee-EEEEEEECCCCcCCCCCCEEEEec-----------------------------CC-------------
Confidence 4577899 999 999999999999999999997531 11
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHc-CC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMH-GA 175 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~-G~ 175 (335)
|++++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+.++++|+|+|+ |.+|++++++|+.+ +.
T Consensus 91 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~ 165 (337)
T cd08275 91 -----GGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV 165 (337)
T ss_pred -----CeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc
Confidence 289999999999999999999999999999999999999888888999999999997 99999999999998 43
Q ss_pred CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
.++... ++++.+.++++|++.+++.+. .++...+++.++ +++|+++|++|+. ....++++++++ |+++.+|.
T Consensus 166 -~~~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~-~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~ 237 (337)
T cd08275 166 -TVVGTA-SASKHEALKENGVTHVIDYRT---QDYVEEVKKISP-EGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGA 237 (337)
T ss_pred -EEEEeC-CHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhC-CCceEEEECCcHH-HHHHHHHhhccC-cEEEEEee
Confidence 333332 455788888899988888876 678788887775 5899999999987 678999999997 99999986
Q ss_pred CCC-c--cc-------------cchhHHHhhcCcEEEEeeccCCCCc-----CcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822 256 GVD-A--MV-------------PLNVIALACGGRTLKGTTFGGIKTK-----SDLPTLLDKCKNKEFKLHQLLTHHVKLE 314 (335)
Q Consensus 256 ~~~-~--~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~l~ 314 (335)
... . .. .+.......+++++.+......... ..+..+++++.++.+.+. .++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 315 (337)
T cd08275 238 ANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFE 315 (337)
T ss_pred cCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHH
Confidence 543 1 11 1222344568888888765432111 135668888888886543 56789999
Q ss_pred hHHHHHHHhcCCCee-eEEEeC
Q 019822 315 EIDKAIQLLKQPDCV-KVLITI 335 (335)
Q Consensus 315 ~~~ea~~~~~~~~~~-k~vi~~ 335 (335)
+++++++.+.+++.. |+++++
T Consensus 316 ~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 316 EVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHcCCCcceEEEeC
Confidence 999999999877655 888764
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.94 E-value=3.2e-25 Score=200.64 Aligned_cols=249 Identities=21% Similarity=0.241 Sum_probs=199.0
Q ss_pred CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822 18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 97 (335)
Q Consensus 18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 97 (335)
.+|.++| ||+ +|+|+.+|+++..+++||+|+..... ..+
T Consensus 58 ~~~~~~g-~e~-~G~v~~~G~~~~~~~~G~~V~~~~~~--------------------------~~~------------- 96 (309)
T cd05289 58 TLPLIPG-HDV-AGVVVAVGPGVTGFKVGDEVFGMTPF--------------------------TRG------------- 96 (309)
T ss_pred CCCCccc-cce-eEEEEeeCCCCCCCCCCCEEEEccCC--------------------------CCC-------------
Confidence 4578999 999 99999999999999999999754310 001
Q ss_pred cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822 98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA 176 (335)
Q Consensus 98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~ 176 (335)
|++++|+.++...++++|+++++..++.+++.+.++++++.+...+.++++|+|+|+ |.+|++++++++..|+
T Consensus 97 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~- 170 (309)
T cd05289 97 -----GAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA- 170 (309)
T ss_pred -----CcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999898899999998877677999999999997 9999999999999999
Q ss_pred EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|++++.++ +.+.++++|++.+++.+. .++.. .+.++++|+++|++++. ....++++++++ |+++.++..
T Consensus 171 ~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~ 240 (309)
T cd05289 171 RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGP 240 (309)
T ss_pred EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCC
Confidence 888888777 888888899888887765 44433 34455899999999988 779999999997 999999875
Q ss_pred CCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEE
Q 019822 257 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVL 332 (335)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~v 332 (335)
.. ... ....+++.+....+... ...+..++++++++.+.+ ++++.+++++++++++.+..++.. |++
T Consensus 241 ~~-~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 241 PP-AEQ----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred Cc-chh----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 43 111 22235566655543211 356888999999988543 367889999999999998876654 665
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=1.6e-24 Score=197.27 Aligned_cols=254 Identities=24% Similarity=0.261 Sum_probs=193.1
Q ss_pred ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822 19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 98 (335)
Q Consensus 19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~ 98 (335)
.|.++| ||+ +|+|+++|+++..+++||+|+..... ..+
T Consensus 58 ~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~--------------------------~~~-------------- 95 (319)
T cd08267 58 FPPIPG-MDF-AGEVVAVGSGVTRFKVGDEVFGRLPP--------------------------KGG-------------- 95 (319)
T ss_pred CCCccc-cee-eEEEEEeCCCCCCCCCCCEEEEeccC--------------------------CCC--------------
Confidence 467899 999 99999999999999999999754210 011
Q ss_pred ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822 99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK 177 (335)
Q Consensus 99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~ 177 (335)
|++++|+.++.+.++++|+++++++++.+++.+.+||+++.+...+.++++|+|+|+ |++|++++++|+.+|+ +
T Consensus 96 ----g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~ 170 (319)
T cd08267 96 ----GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-H 170 (319)
T ss_pred ----ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-E
Confidence 389999999999999999999999999999999999999877777999999999997 9999999999999999 8
Q ss_pred EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822 178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
|++++++ ++.+.++++|++++++.+. .++. +..+.++++|+++||+++. ......+..++++ |+++.+|..
T Consensus 171 v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~ 242 (319)
T cd08267 171 VTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGG 242 (319)
T ss_pred EEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccc
Confidence 9998865 8888889999988888765 3443 4455666899999999853 2333444458897 999999876
Q ss_pred CC-ccccc---hhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eE
Q 019822 257 VD-AMVPL---NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV 331 (335)
Q Consensus 257 ~~-~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~ 331 (335)
.. ..... ...... ....+....... ..+.+..+++++.++++.+ ++++.++++++++|++.+.+++.. |+
T Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~v 317 (319)
T cd08267 243 PSGLLLVLLLLPLTLGG-GGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKV 317 (319)
T ss_pred cccccccccccchhhcc-ccceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcE
Confidence 53 11111 111111 222222222111 1456888999999988654 467889999999999999876654 66
Q ss_pred E
Q 019822 332 L 332 (335)
Q Consensus 332 v 332 (335)
+
T Consensus 318 v 318 (319)
T cd08267 318 V 318 (319)
T ss_pred e
Confidence 5
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.92 E-value=2e-23 Score=178.95 Aligned_cols=247 Identities=23% Similarity=0.248 Sum_probs=193.9
Q ss_pred ccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecccccccce
Q 019822 27 KVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWS 106 (335)
Q Consensus 27 e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~~ 106 (335)
.+ +|+|++. +...+++||.|+.. . +|.
T Consensus 78 ~G-V~kVi~S--~~~~~~~GD~v~g~-----------------------------~---------------------gWe 104 (343)
T KOG1196|consen 78 FG-VAKVIDS--GHPNYKKGDLVWGI-----------------------------V---------------------GWE 104 (343)
T ss_pred Cc-eEEEEec--CCCCCCcCceEEEe-----------------------------c---------------------cce
Confidence 45 8999995 45779999999632 1 689
Q ss_pred eeEEeccc--ceEEcCC--CCCccc-ccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE
Q 019822 107 EYMVIDAN--YVVKVDP--SIDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG 180 (335)
Q Consensus 107 ~~~~v~~~--~~~~lp~--~~~~~~-aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~ 180 (335)
||..++.. ..+++|. +.++.. ..++..+..|||..+++....+++++|+|-|| |++|+++.|+|+.+|+ +|++
T Consensus 105 eysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVG 183 (343)
T KOG1196|consen 105 EYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVG 183 (343)
T ss_pred EEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEE
Confidence 99988764 3444443 333333 23356688999999999999999999999987 9999999999999999 9999
Q ss_pred EcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-
Q 019822 181 IDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD- 258 (335)
Q Consensus 181 ~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~- 258 (335)
++.++||...++ ++|.+..+||++ +.+..+.+++.... |+|+.||.+|+. .++..+..+... ||++.+|..+.
T Consensus 184 saGS~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~-GIDiYfeNVGG~-~lDavl~nM~~~-gri~~CG~ISqY 258 (343)
T KOG1196|consen 184 SAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMNLH-GRIAVCGMISQY 258 (343)
T ss_pred ecCChhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCC-cceEEEeccCcH-HHHHHHHhhhhc-cceEeeeeehhc
Confidence 999999999984 579999999998 33788888887665 999999999998 889999999997 99999997764
Q ss_pred -ccccc---hhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eE
Q 019822 259 -AMVPL---NVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV 331 (335)
Q Consensus 259 -~~~~~---~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~ 331 (335)
.+.+. +...++.+++.+.|+.+.++. ..+.++.+..++++|+++...-+. -.|+..++||.-|.+++.. |.
T Consensus 259 N~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~--~Glen~P~A~vglf~GkNvGKq 336 (343)
T KOG1196|consen 259 NLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIA--DGLENGPSALVGLFHGKNVGKQ 336 (343)
T ss_pred cccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHH--HHHhccHHHHHHHhccCcccce
Confidence 12222 234456799999997765542 234467788889999988664443 3699999999999888765 87
Q ss_pred EEe
Q 019822 332 LIT 334 (335)
Q Consensus 332 vi~ 334 (335)
++.
T Consensus 337 iv~ 339 (343)
T KOG1196|consen 337 LVK 339 (343)
T ss_pred EEE
Confidence 765
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.78 E-value=2.8e-18 Score=135.81 Aligned_cols=129 Identities=30% Similarity=0.471 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822 161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240 (335)
Q Consensus 161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~ 240 (335)
++|++++|+|+++|+ +|+++++++++++.++++|+++++++++ .++.+.++++++++++|+||||+|+...++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999998 789999999999889999999999877999999
Q ss_pred HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHh
Q 019822 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCK 297 (335)
Q Consensus 241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~ 297 (335)
++++++ |+++.+|.......+++...++.+++++.|+..++ +++++++++++.
T Consensus 77 ~~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HHEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HHhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 999998 99999999875678889999999999999998655 578888888875
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.70 E-value=1.1e-17 Score=128.31 Aligned_cols=92 Identities=33% Similarity=0.427 Sum_probs=78.9
Q ss_pred EEeEeecC-CCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822 6 TLISFALK-DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84 (335)
Q Consensus 6 d~~~~~g~-~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~ 84 (335)
|++.+.|. .+...+|.++| ||+ +|+|+++|++++.|++||+|++.+...|+.|++|+.+.++.|.+... +|+..+
T Consensus 17 D~~~~~g~~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~--~g~~~~ 92 (109)
T PF08240_consen 17 DLHIREGGPPPPPKFPLILG-HEG-VGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEV--LGLGLD 92 (109)
T ss_dssp HHHHHTTSSSSTSSSSEES--SEE-EEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEE--TTTSST
T ss_pred HHHHHhhccccCCCCCcccc-cce-eeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCE--eEcCCC
Confidence 55666673 44468999999 999 99999999999999999999999988899999999999999988776 466666
Q ss_pred CCccccccCceeecccccccceeeEEecccceEEc
Q 019822 85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV 119 (335)
Q Consensus 85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l 119 (335)
| +|+||+.+|+++++|+
T Consensus 93 G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 93 G------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp C------------------SSBSEEEEEGGGEEEE
T ss_pred C------------------cccCeEEEehHHEEEC
Confidence 6 9999999999999985
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.49 E-value=1.7e-12 Score=120.51 Aligned_cols=174 Identities=21% Similarity=0.226 Sum_probs=136.1
Q ss_pred hHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822 139 YGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 139 ~~~l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
+.++.+..++ .+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+.+.++++|++.+. ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~---------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT---------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc---------HHHHH---
Confidence 4445454443 689999999999999999999999999 899999999999999999984321 11122
Q ss_pred hCCCCccEEEEcCCChHHHHHH-HHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHH--HHHH
Q 019822 218 THGMGVDYCFECTGVPSLLSEA-LETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLP--TLLD 294 (335)
Q Consensus 218 ~~g~g~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~ 294 (335)
+++|+||+|+|....+... ++.++++ |+++.+|.. ..+++...+..+++++.++.... ...+++ ..+.
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~---~~eId~~~L~~~el~i~g~~~~~--~~~~~~~g~aI~ 326 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQV--DRYELPDGRRII 326 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC---CCccCHHHHHhhccEEEEccCCc--ceEEcCCcchhh
Confidence 2689999999998777765 9999997 999999864 45677777887888888775321 122455 7999
Q ss_pred HHhCCCC-CCCCceeEE-----eech-hHHHHHHHhcCCCe--eeEEEe
Q 019822 295 KCKNKEF-KLHQLLTHH-----VKLE-EIDKAIQLLKQPDC--VKVLIT 334 (335)
Q Consensus 295 ~i~~~~~-~~~~~~~~~-----~~l~-~~~ea~~~~~~~~~--~k~vi~ 334 (335)
++.+|++ ++...++|. ++|+ |+.++++.+.+++. .|+++.
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 9999998 888888888 8899 99999998887654 376654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.38 E-value=7.8e-12 Score=119.03 Aligned_cols=155 Identities=21% Similarity=0.281 Sum_probs=115.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCC----------chhHHHHHHh
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEP----------NKSISELVKG 216 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~----------~~~~~~~i~~ 216 (335)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.. ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4579999999999999999999999999 89999999999999999999854 5543200 0133333333
Q ss_pred h-hC-CCCccEEEEcCCCh-----HH-HHHHHHhhccCCeEEEEEccCCCc--cccchhHHHhh-cCcEEEEeeccCCCC
Q 019822 217 I-TH-GMGVDYCFECTGVP-----SL-LSEALETTKVGKGKVIVIGVGVDA--MVPLNVIALAC-GGRTLKGTTFGGIKT 285 (335)
Q Consensus 217 ~-~~-g~g~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~--~~~~~~~~~~~-~~~~~~g~~~~~~~~ 285 (335)
. .+ .+++|+||+|++.+ .+ .+..++.++++ |++++++...+. ..+.+...++. +++++.|.. ++
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~--n~-- 315 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT--DL-- 315 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeC--CC--
Confidence 3 22 14799999999863 24 48999999998 999999985432 34555555664 789999876 22
Q ss_pred cCcHH-HHHHHHhCCCCCCCCcee
Q 019822 286 KSDLP-TLLDKCKNKEFKLHQLLT 308 (335)
Q Consensus 286 ~~~~~-~~~~~i~~~~~~~~~~~~ 308 (335)
+..+. ++.+++.++.+++.++++
T Consensus 316 P~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 316 PSRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred chhHHHHHHHHHHhCCccHHHHhc
Confidence 23454 588999988877666655
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.29 E-value=2.7e-12 Score=100.96 Aligned_cols=120 Identities=24% Similarity=0.324 Sum_probs=77.1
Q ss_pred cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC--ChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhc
Q 019822 194 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271 (335)
Q Consensus 194 lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 271 (335)
|||++|+||++ .++ ++..++|+|||++| ++..+..++++| ++ |+++.++. .........+
T Consensus 1 LGAd~vidy~~---~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC------cccchhhhhc
Confidence 68999999987 666 44458999999999 654446777788 97 99999974 1111111112
Q ss_pred CcEEEEeeccCCC----CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEE
Q 019822 272 GRTLKGTTFGGIK----TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI 333 (335)
Q Consensus 272 ~~~~~g~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi 333 (335)
...+....+.... ..+.++.+.+++.+|++++. +.++|||+++.+|++.+++++.. |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2222322222110 23458999999999997765 88899999999999999998875 9886
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.55 E-value=3.9e-07 Score=81.32 Aligned_cols=162 Identities=20% Similarity=0.245 Sum_probs=100.0
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhh-
Q 019822 145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~- 218 (335)
.+.+.++++||.+|+|+ |..++++++..|.. +|++++.+++..+.+++. +...+-... .+ +.++.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d----~~~l~~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GE----IEALPV 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cc----hhhCCC
Confidence 36688999999999987 88888888887753 799999999998888653 332221011 11 22221
Q ss_pred CCCCccEEEEcC------CChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHH
Q 019822 219 HGMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTL 292 (335)
Q Consensus 219 ~g~g~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 292 (335)
....||+|+... .....++.+.+.|+++ |+++..+...... ++ ..+ .+...+.+...+. .....+.
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~--~~-~~~-~~~~~~~~~~~~~---~~~~~e~ 214 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE--LP-EEI-RNDAELYAGCVAG---ALQEEEY 214 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC--CC-HHH-HHhHHHHhccccC---CCCHHHH
Confidence 123799998532 2345789999999998 9999876554321 11 111 1222222222221 2345556
Q ss_pred HHHHhCCCCC-CCCceeEEeechhHHHHHHHh
Q 019822 293 LDKCKNKEFK-LHQLLTHHVKLEEIDKAIQLL 323 (335)
Q Consensus 293 ~~~i~~~~~~-~~~~~~~~~~l~~~~ea~~~~ 323 (335)
.+++++..+. ......+.++++++.++++.+
T Consensus 215 ~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 215 LAMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 6666664333 222244567899999999988
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.55 E-value=9.7e-07 Score=84.29 Aligned_cols=108 Identities=20% Similarity=0.313 Sum_probs=82.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCC----------CCchhHHHHHHhh
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDD----------EPNKSISELVKGI 217 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~----------~~~~~~~~~i~~~ 217 (335)
.++++|+|+|+|.+|++++++++.+|+ +|+++++++++++.++++|++.+ ++..+ +...++.+..+++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999 89999999999999999998763 33211 0012344434443
Q ss_pred hC--CCCccEEEEcC---CChH---HHHHHHHhhccCCeEEEEEccCCC
Q 019822 218 TH--GMGVDYCFECT---GVPS---LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 218 ~~--g~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
+. .+++|++|+|+ |.+. ..+...+.++++ +.+++++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 33 35799999999 6533 456789999998 99999986655
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.45 E-value=1.6e-08 Score=95.47 Aligned_cols=159 Identities=14% Similarity=0.156 Sum_probs=105.4
Q ss_pred ccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccccc
Q 019822 23 FSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSC 102 (335)
Q Consensus 23 ~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 102 (335)
-| .|+ ++.+.+|++++.. +|++-+.. ||+|.+| ++.|.+... .|...++
T Consensus 90 ~~-~~a-~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~--~g~~l~~----------------- 138 (417)
T TIGR01035 90 TG-ESA-VEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT--VGKVLER----------------- 138 (417)
T ss_pred Cc-hHH-HHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC--chHHHHH-----------------
Confidence 46 888 9999999998766 66666666 9999999 566665544 3545554
Q ss_pred ccceeeEEecccceEEcCCCCCcccccccccchhhhhHHH---HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEE
Q 019822 103 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA---WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII 179 (335)
Q Consensus 103 g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l---~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~ 179 (335)
.|++++.++. .+.. .-.++ ..+.+.++.++ .+..+..++++|+|+|+|.+|..+++.++..|+.+|+
T Consensus 139 -lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~ 208 (417)
T TIGR01035 139 -LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKIL 208 (417)
T ss_pred -HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEE
Confidence 7999988876 2221 00111 11122222222 2333456789999999999999999999999966999
Q ss_pred EEcCChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822 180 GIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 234 (335)
Q Consensus 180 ~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~ 234 (335)
++.++.++.+ +++++|.. .++. .+. .+... ++|+||+|++.+.
T Consensus 209 v~~rs~~ra~~la~~~g~~-~i~~-----~~l----~~~l~--~aDvVi~aT~s~~ 252 (417)
T TIGR01035 209 IANRTYERAEDLAKELGGE-AVKF-----EDL----EEYLA--EADIVISSTGAPH 252 (417)
T ss_pred EEeCCHHHHHHHHHHcCCe-EeeH-----HHH----HHHHh--hCCEEEECCCCCC
Confidence 9999988754 56777753 2221 112 22222 6899999998764
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.31 E-value=1.6e-05 Score=71.66 Aligned_cols=95 Identities=19% Similarity=0.243 Sum_probs=75.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
.+++++|+|.|.+|+++++.++.+|+ +|+++++++++.+.++++|++.+ ... .+.+... ++|+||+|
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~~---------~l~~~l~--~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HLS---------ELAEEVG--KIDIIFNT 217 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cHH---------HHHHHhC--CCCEEEEC
Confidence 68999999999999999999999999 99999999998888888886532 111 2223222 58999999
Q ss_pred CCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822 230 TGVPSLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
++....-...++.++++ +.+++++...+
T Consensus 218 ~p~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 218 IPALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred CChhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 87653445677888997 99999987664
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.30 E-value=2e-05 Score=73.93 Aligned_cols=103 Identities=24% Similarity=0.285 Sum_probs=77.9
Q ss_pred hhHHHHHhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHh
Q 019822 138 GYGAAWKEAKVE-KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG 216 (335)
Q Consensus 138 a~~~l~~~~~~~-~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~ 216 (335)
.|.++.+..++. .+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT--------MEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH--
Confidence 344443333544 89999999999999999999999999 999999988887666666754 221 21122
Q ss_pred hhCCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822 217 ITHGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 217 ~~~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 257 (335)
. ++|+||+++|....+. ..+..++++ +.++.+|...
T Consensus 266 --~--~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --E--LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --h--CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 1 6899999999886676 678888897 8888888765
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.19 E-value=2.2e-05 Score=69.18 Aligned_cols=134 Identities=21% Similarity=0.277 Sum_probs=83.3
Q ss_pred cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 019822 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 182 (335)
Q Consensus 104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~ 182 (335)
+|.+|.. +...++.+++++++..+.- + .|. .++.... ...++++||-+|+|+ |.+++.+++ .|+.+|++++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~---tt~-~~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTH-P---TTR-LCLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCC-H---HHH-HHHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 4555544 6678899999988776542 1 121 1221111 256889999999987 888776555 6775799999
Q ss_pred CChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC-CccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccCC
Q 019822 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM-GVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 183 ~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~-g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
.++...+.+++.-...-+. .. + .+..+. .||+|+...... ..++.+.+.|+++ |+++..+...
T Consensus 150 is~~~l~~A~~n~~~~~~~-~~---------~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 150 IDPQAVEAARENAELNGVE-LN---------V-YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred CCHHHHHHHHHHHHHcCCC-ce---------E-EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 9998888775431100000 00 0 001111 589998665433 2456788889998 9999886543
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.15 E-value=4.2e-05 Score=71.35 Aligned_cols=102 Identities=25% Similarity=0.297 Sum_probs=77.4
Q ss_pred hHHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822 139 YGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 139 ~~~l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
+.++.+..+ ...+++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal--- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA--- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH---
Confidence 334434334 3689999999999999999999999999 999999888887777777763 221 11122
Q ss_pred hCCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822 218 THGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 218 ~~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 257 (335)
++.|++|+++|....++ ..+..++++ +.++.+|...
T Consensus 249 ---~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 ---KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred ---hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 25799999999987776 488888887 8888887754
No 139
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.14 E-value=1.3e-07 Score=89.58 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=96.1
Q ss_pred ccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccccc
Q 019822 23 FSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSC 102 (335)
Q Consensus 23 ~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 102 (335)
-| ||. ++.+.+|+++....-+|+ +.. |++|.. .++.|.+... .|...++
T Consensus 92 ~g-~ea-~~hl~~V~~GldS~V~GE-----~qI-lgQvk~----a~~~a~~~g~--~g~~l~~----------------- 140 (423)
T PRK00045 92 EG-EEA-VRHLFRVASGLDSMVLGE-----PQI-LGQVKD----AYALAQEAGT--VGTILNR----------------- 140 (423)
T ss_pred CC-HHH-HHHHHHHHhhhhhhhcCC-----hHH-HHHHHH----HHHHHHHcCC--chHHHHH-----------------
Confidence 47 999 999999999887643333 333 555442 2233332222 1222222
Q ss_pred ccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc---CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEE
Q 019822 103 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA---KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII 179 (335)
Q Consensus 103 g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~ 179 (335)
.|++.+.++. .+..+.+ ....+.++++.++.... +..++.+|+|+|+|.+|.++++.++..|+.+|+
T Consensus 141 -lf~~a~~~~k--------~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 141 -LFQKAFSVAK--------RVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred -HHHHHHHHHh--------hHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 5555554443 2221111 12224555566552221 235789999999999999999999999987899
Q ss_pred EEcCChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822 180 GIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS 234 (335)
Q Consensus 180 ~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~ 234 (335)
++.++.++.+ +++++|.. +++.. .+.+... ++|+||+|++.+.
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~~---------~~~~~l~--~aDvVI~aT~s~~ 254 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPLD---------ELPEALA--EADIVISSTGAPH 254 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeHH---------HHHHHhc--cCCEEEECCCCCC
Confidence 9999988865 56777753 32221 1222222 6899999998763
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.12 E-value=1.5e-05 Score=72.55 Aligned_cols=108 Identities=23% Similarity=0.282 Sum_probs=78.1
Q ss_pred cceEEcCCCCCcccccccccchhhhhHHHHHhcCC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-
Q 019822 114 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV----EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK- 188 (335)
Q Consensus 114 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~- 188 (335)
...+++|+.+..+.+.... +.++++.++ +.+.. .++.+|+|+|+|.+|..+++.++..|..+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3567778888877777655 667777765 33332 4789999999999999999999988877999999998875
Q ss_pred HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHH
Q 019822 189 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL 235 (335)
Q Consensus 189 ~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~ 235 (335)
++++++|+. +++.. ++.+.+ . .+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~~-----~~~~~l----~--~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD-----ELLELL----N--EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH-----HHHHHH----h--cCCEEEECCCCCch
Confidence 566788873 32221 122222 1 58999999998744
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.99 E-value=8.8e-05 Score=69.99 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=79.0
Q ss_pred hHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822 139 YGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 139 ~~~l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
+.++.+..++ ..+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. + . ..+.++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v---~-----leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L---T-----LEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c---c-----HHHHHh--
Confidence 4445454444 679999999999999999999999999 9999998888776776777642 1 1 222222
Q ss_pred hCCCCccEEEEcCCChHHH-HHHHHhhccCCeEEEEEccCC
Q 019822 218 THGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 218 ~~g~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~ 257 (335)
..|+++++.|....+ ...++.++++ +.++-+|...
T Consensus 309 ----~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 309 ----EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred ----hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 579999999987654 7899999997 9999998754
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.80 E-value=0.00023 Score=66.24 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=70.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++......... . +.+.+... ++|++|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~---~~l~~~l~--~aDvVI~ 236 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN---A---YEIEDAVK--RADLLIG 236 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC---H---HHHHHHHc--cCCEEEE
Confidence 45669999999999999999999999 8999999988887764 455432222221 1 12333322 6899999
Q ss_pred cCC---C--hH-HHHHHHHhhccCCeEEEEEccCCC
Q 019822 229 CTG---V--PS-LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 229 ~~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
|++ . +. .....++.++++ +.+++++...+
T Consensus 237 a~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 237 AVLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 973 2 21 136777888997 99999986555
No 143
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=0.0002 Score=60.20 Aligned_cols=116 Identities=17% Similarity=0.243 Sum_probs=80.8
Q ss_pred cccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHhcCCceEeCC
Q 019822 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW----KKEKGKAFGMTDFINP 202 (335)
Q Consensus 127 ~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~----~~~~~~~lga~~v~~~ 202 (335)
..-.++-+...|. +.+...++++++||=+|+|+ |+.++-|++..+ +|+.+++.++ ..+.++.+|...|.-.
T Consensus 51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~ 125 (209)
T COG2518 51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVR 125 (209)
T ss_pred CCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence 3334444545443 45778899999999999874 999999999888 8999998887 3344567886443222
Q ss_pred CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+. | -.+.+.+...||.|+-+.+.+..-+.+++.|+++ |+++..-.
T Consensus 126 ~g----D---G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 126 HG----D---GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred EC----C---cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 21 1 1122334458999998777765667899999998 98876633
No 144
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.76 E-value=0.00063 Score=61.04 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=70.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
.+++++|+|.|.+|.+++..++.+|+ +|+++++++++.+.+.+.|... +.. . .+.+... ++|+|+++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~----~l~~~l~--~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----N----KLEEKVA--EIDIVINT 216 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----H----HHHHHhc--cCCEEEEC
Confidence 57899999999999999999999999 9999999988877777776532 111 1 1223222 68999999
Q ss_pred CCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822 230 TGVPSLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
++..-.-...++.++++ ..++.++...+
T Consensus 217 ~P~~ii~~~~l~~~k~~-aliIDlas~Pg 244 (287)
T TIGR02853 217 IPALVLTADVLSKLPKH-AVIIDLASKPG 244 (287)
T ss_pred CChHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence 87652224566778886 88888877553
No 145
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.75 E-value=0.00028 Score=63.51 Aligned_cols=98 Identities=22% Similarity=0.271 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc-eEeCCCCCCchhHHHHHHhhhCCCC
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
..++++||-+|+|+ |..++.+++ .|+.+|++++.++...+.+++. +.. .+.... .+ ......+ +
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~----~~----~~~~~~~-~ 225 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL----IY----LEQPIEG-K 225 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cc----cccccCC-C
Confidence 45789999999987 888777766 5766999999999887776542 211 111111 01 1112223 7
Q ss_pred ccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccCC
Q 019822 223 VDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 223 ~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
||+|+...... ..+..+.+.|+++ |+++..+...
T Consensus 226 fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~ 262 (288)
T TIGR00406 226 ADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGILE 262 (288)
T ss_pred ceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence 99999654332 3556778899997 9998877643
No 146
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.74 E-value=0.00014 Score=57.69 Aligned_cols=98 Identities=23% Similarity=0.285 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT--DFINPDDEPNKSISELVKGITHGMGVD 224 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d 224 (335)
--++++++|+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++.. .+++..+ ..+.+. .+|
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~------~~D 77 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ------EAD 77 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH------TES
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh------hCC
Confidence 44689999999999999999999999998899999999887765 455322 2333433 222221 689
Q ss_pred EEEEcCCChH--HHHHHHHhhccCCeEEEEEccC
Q 019822 225 YCFECTGVPS--LLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 225 ~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+||+|++.+. .....+.......+.+++++.+
T Consensus 78 ivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 78 IVINATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp EEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred eEEEecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 9999988652 1123333332210366777654
No 147
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.70 E-value=0.00041 Score=65.68 Aligned_cols=101 Identities=22% Similarity=0.316 Sum_probs=75.6
Q ss_pred HHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822 140 GAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 140 ~~l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~ 218 (335)
.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ ++.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell---- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVV---- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHH----
Confidence 33444333 4579999999999999999999999999 99999887776655555565321 122222
Q ss_pred CCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822 219 HGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 219 ~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 257 (335)
+..|+|+.++|....+. ..++.++++ +.++-+|...
T Consensus 308 --~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 --ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred --hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 15899999999876664 889999997 9999888764
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.61 E-value=0.0007 Score=68.36 Aligned_cols=139 Identities=18% Similarity=0.236 Sum_probs=85.0
Q ss_pred cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019822 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID 182 (335)
Q Consensus 104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~ 182 (335)
++++|..+++..++.+ +..+.+++..-.. ......+++++||+|+ |.+|.++++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 4667777777666666 4444444431100 0122346789999986 9999999999999999 999999
Q ss_pred CChhhHHHH-HhcCC-----ceEeCCCCCCchhHHHHHHhhh--CCCCccEEEEcCCC----------------------
Q 019822 183 KNPWKKEKG-KAFGM-----TDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTGV---------------------- 232 (335)
Q Consensus 183 ~~~~~~~~~-~~lga-----~~v~~~~~~~~~~~~~~i~~~~--~g~g~d~vid~~g~---------------------- 232 (335)
++.++.+.+ ++++. ....|-.+ .......+.+.. .+ ++|++|++.|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g-~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~ 530 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFG-GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA 530 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence 998876654 33432 11234333 122333333321 23 69999999982
Q ss_pred ---hHHHHHHHHhhcc---CCeEEEEEccCCC
Q 019822 233 ---PSLLSEALETTKV---GKGKVIVIGVGVD 258 (335)
Q Consensus 233 ---~~~~~~~~~~l~~---~~G~~v~~g~~~~ 258 (335)
...++.+++.+.. + |+++.++....
T Consensus 531 ~g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~~ 561 (681)
T PRK08324 531 TGHFLVAREAVRIMKAQGLG-GSIVFIASKNA 561 (681)
T ss_pred HHHHHHHHHHHHHHHhcCCC-cEEEEECCccc
Confidence 1123444555555 4 78998886543
No 149
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.59 E-value=0.00052 Score=58.87 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=59.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC----ceEeCCCCCCchhHHHHHHhhhCCC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM----TDFINPDDEPNKSISELVKGITHGM-G 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga----~~v~~~~~~~~~~~~~~i~~~~~g~-g 222 (335)
+++.++|+|+ +++|.+.++.+...|+ +|+.+.|+.++++.+ .+++. ...+|-.+ .....+.+..+.... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578899998 9999999999999999 999999999999887 56772 22345443 234445555444333 5
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999998874
No 150
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.56 E-value=0.00013 Score=72.03 Aligned_cols=80 Identities=21% Similarity=0.236 Sum_probs=58.5
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHhcCCceEeCCCCC
Q 019822 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---------------------PWKKEKGKAFGMTDFINPDDE 205 (335)
Q Consensus 147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~---------------------~~~~~~~~~lga~~v~~~~~~ 205 (335)
...++++|+|+|+|++|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 35688999999999999999999999999 89999842 34566778899876665432
Q ss_pred CchhH-HHHHHhhhCCCCccEEEEcCCChH
Q 019822 206 PNKSI-SELVKGITHGMGVDYCFECTGVPS 234 (335)
Q Consensus 206 ~~~~~-~~~i~~~~~g~g~d~vid~~g~~~ 234 (335)
..+. ...+. .++|+||+++|...
T Consensus 211 -~~~~~~~~~~-----~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 -GEDITLEQLE-----GEFDAVFVAIGAQL 234 (564)
T ss_pred -CCcCCHHHHH-----hhCCEEEEeeCCCC
Confidence 0111 11121 26999999999753
No 151
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.39 E-value=0.002 Score=57.40 Aligned_cols=131 Identities=23% Similarity=0.331 Sum_probs=78.9
Q ss_pred ccceEEcCCCCCcccccccccchhhhhHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 113 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 113 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
...++++++++.|-.+ ...+|++ +|.-. ..++++.+||=+|+|+ |.++|..++ +|+++|+++|.++-..+.+
T Consensus 129 ~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa 201 (300)
T COG2264 129 DELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAA 201 (300)
T ss_pred CceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHH
Confidence 3667888887755322 2334443 34322 2367999999999864 777776666 7887999999988655544
Q ss_pred ----HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccCCC
Q 019822 192 ----KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 192 ----~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
+..+..... +. ..+ ...+...++.+|+|+-.+=.. ...+.+...++++ |++++.|....
T Consensus 202 ~eNa~~N~v~~~~--~~---~~~--~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~ 267 (300)
T COG2264 202 RENARLNGVELLV--QA---KGF--LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILED 267 (300)
T ss_pred HHHHHHcCCchhh--hc---ccc--cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence 333333100 00 000 011112234899999655222 2456777889997 99999997653
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.30 E-value=0.006 Score=52.85 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=66.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCceEe--CCCCCCchhHHHHHHhhhC-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFI--NPDDEPNKSISELVKGITH-GM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~~v~--~~~~~~~~~~~~~i~~~~~-g~ 221 (335)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+ |-.+ .....+.+++... -.
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4679999987 9999999999999999 999999998877655 222 222222 2222 1223333332211 12
Q ss_pred CccEEEEcCCChH-----------------------HHHHHHHhhccCCeEEEEEccCC
Q 019822 222 GVDYCFECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 222 g~d~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
++|.++.+.+... .++..++.+..+ |+++.++...
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 6899998876320 134445566666 8898887654
No 153
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.25 E-value=0.0049 Score=52.15 Aligned_cols=102 Identities=23% Similarity=0.405 Sum_probs=69.5
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcC-CceEeCCCCCCchhHHHHHHhh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFG-MTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg-a~~v~~~~~~~~~~~~~~i~~~ 217 (335)
....+.++++||.+|+|+ |..++.+++..+. .+|++++.+++..+.++ +++ .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456788999999999987 9999999987653 38999999998877653 455 33221111 1222223222
Q ss_pred hCCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEE
Q 019822 218 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 218 ~~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 253 (335)
.+ .+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 109 -~~-~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NE-KFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CC-CCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 22 79999975543 34677888899997 998753
No 154
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.25 E-value=0.0023 Score=53.35 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=56.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---CceEeCCCCCCchh----HHHHHHhhhCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---MTDFINPDDEPNKS----ISELVKGITHGM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---a~~v~~~~~~~~~~----~~~~i~~~~~g~ 221 (335)
.|.+|||+|+ +++|+++++-...+|- +|+.+.|++++++.+++.- ...|.|-.+ .+ +.+++++-..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-- 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-- 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC--
Confidence 3678999965 9999999999999998 9999999999999986643 234555544 44 4444444322
Q ss_pred CccEEEEcCC
Q 019822 222 GVDYCFECTG 231 (335)
Q Consensus 222 g~d~vid~~g 231 (335)
..++++++.|
T Consensus 78 ~lNvliNNAG 87 (245)
T COG3967 78 NLNVLINNAG 87 (245)
T ss_pred chheeeeccc
Confidence 4789998876
No 155
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.23 E-value=0.0025 Score=56.03 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=57.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcC----C-ceE--eCCCCCCchhHHHHHHhhh-
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG----M-TDF--INPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg----a-~~v--~~~~~~~~~~~~~~i~~~~- 218 (335)
..+.++||+|+ +++|...+..+...|+ +++.+.|++++++.+. ++. . ..+ +|-.+ .+-...+.+..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence 46789999998 9999999999999999 9999999999998763 332 1 123 34443 33344444322
Q ss_pred -CCCCccEEEEcCCC
Q 019822 219 -HGMGVDYCFECTGV 232 (335)
Q Consensus 219 -~g~g~d~vid~~g~ 232 (335)
.+..+|+.+++.|.
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 22479999999985
No 156
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.19 E-value=0.0032 Score=58.90 Aligned_cols=113 Identities=13% Similarity=0.138 Sum_probs=76.4
Q ss_pred cccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhH
Q 019822 131 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210 (335)
Q Consensus 131 l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 210 (335)
+..+-...+..+.+..++.++++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~ 222 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY 222 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence 333444445556677788999999999986 47788889988898 9999999999999887643211111111 122
Q ss_pred HHHHHhhhCCCCccEEEEc-----CCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822 211 SELVKGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 211 ~~~i~~~~~g~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+++ .+ .+|.|+.. ++. ...++.+.+.|+++ |+++....
T Consensus 223 ----~~l-~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 223 ----RDL-NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred ----hhc-CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 122 23 69998753 332 34678888999998 99887643
No 157
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.17 E-value=0.017 Score=51.88 Aligned_cols=140 Identities=11% Similarity=0.114 Sum_probs=88.6
Q ss_pred cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC---CCCCCEEEEEcC-CHHHHHHHHHHH-HcCCCEE
Q 019822 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK---VEKGSSVAVLGL-GTVGLGAVDGAR-MHGAAKI 178 (335)
Q Consensus 104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~~~~VlI~G~-g~vG~~ai~la~-~~G~~~V 178 (335)
.|-+|.++..+..+.- ......+..-+ .+.|+|. |.+... .-..+.|+|.++ +-.++.++.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4677777765544311 11111222223 5566664 333222 344567777776 888888888888 4554489
Q ss_pred EEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 179 IGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 179 ~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
+++. |+.+..+.+.+|. +.|+.|++ |..+... .--+++|..|+..+...+-+.+...--..+.+|...
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~-~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAP-QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCC-CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9998 6777789999995 77888875 3333222 456778999998887788887776423466777554
Q ss_pred C
Q 019822 258 D 258 (335)
Q Consensus 258 ~ 258 (335)
-
T Consensus 235 ~ 235 (314)
T PF11017_consen 235 W 235 (314)
T ss_pred c
Confidence 3
No 158
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.11 E-value=0.0072 Score=49.87 Aligned_cols=102 Identities=22% Similarity=0.319 Sum_probs=71.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce--EeCCCCCCchhHHHHHHhh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGI 217 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~--v~~~~~~~~~~~~~~i~~~ 217 (335)
...++++++.++=+|+|+ |...+++++..-..+|++++++++..+.. ++||.+. ++..+. .+.+..+
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A------p~~L~~~ 100 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA------PEALPDL 100 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc------hHhhcCC
Confidence 446788999888889864 77888888544444999999999887765 5688663 443332 2223322
Q ss_pred hCCCCccEEEEcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822 218 THGMGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 218 ~~g~g~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
..+|.+|=-=|. +..++.+|..|+++ |++|.-...
T Consensus 101 ---~~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 101 ---PSPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred ---CCCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 158999843322 35788999999998 999877554
No 159
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.11 E-value=0.0046 Score=55.52 Aligned_cols=127 Identities=22% Similarity=0.300 Sum_probs=72.2
Q ss_pred cccceEEcCCCCCcccccccccchhhhhHHHHHhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822 112 DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190 (335)
Q Consensus 112 ~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~ 190 (335)
+.+.++.+++++.|-.+. ..+|. .+|.... -..++++||=+|+|+ |.+++..++ +|+++|++++.++...+.
T Consensus 127 ~~~~~I~idPg~AFGTG~----H~TT~-lcl~~l~~~~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~ 199 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGH----HPTTR-LCLELLEKYVKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEA 199 (295)
T ss_dssp TTSEEEEESTTSSS-SSH----CHHHH-HHHHHHHHHSSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHH
T ss_pred CCcEEEEECCCCcccCCC----CHHHH-HHHHHHHHhccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHH
Confidence 335566666665433321 22222 2232222 267889999999763 666666555 688899999999876655
Q ss_pred HHh----cCC-ceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHH---HHHHHHhhccCCeEEEEEccCCC
Q 019822 191 GKA----FGM-TDF-INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL---LSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 191 ~~~----lga-~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
+++ .|. ..+ +.... + ... ..||+|+-..-...+ ...+.+.++++ |++++.|....
T Consensus 200 a~~N~~~N~~~~~~~v~~~~----~-------~~~-~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~ 263 (295)
T PF06325_consen 200 ARENAELNGVEDRIEVSLSE----D-------LVE-GKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILEE 263 (295)
T ss_dssp HHHHHHHTT-TTCEEESCTS----C-------TCC-S-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred HHHHHHHcCCCeeEEEEEec----c-------ccc-ccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence 533 332 122 11111 1 112 389999977655422 34455678887 99999988764
No 160
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.08 E-value=0.0083 Score=49.75 Aligned_cols=94 Identities=20% Similarity=0.258 Sum_probs=64.4
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
|+|+|+ |.+|..+++.+...|. +|+++.|++++.+. ..+...+ .|..+ . +.+++... ++|.||++.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d---~---~~~~~al~--~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD---P---DSVKAALK--GADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC---H---HHHHHHHT--TSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh---h---hhhhhhhh--hcchhhhhhh
Confidence 789997 9999999999999998 99999999998877 3444332 23332 2 23444333 6999999998
Q ss_pred C----hHHHHHHHHhhccC-CeEEEEEccCCC
Q 019822 232 V----PSLLSEALETTKVG-KGKVIVIGVGVD 258 (335)
Q Consensus 232 ~----~~~~~~~~~~l~~~-~G~~v~~g~~~~ 258 (335)
. ......+++.+... -.+++.++....
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~ 101 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGV 101 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEETTG
T ss_pred hhcccccccccccccccccccccceeeecccc
Confidence 4 22445666665443 137777765543
No 161
>PRK04148 hypothetical protein; Provisional
Probab=97.05 E-value=0.0057 Score=47.94 Aligned_cols=89 Identities=21% Similarity=0.247 Sum_probs=60.2
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
....++.+++++|.| .|...+..+...|. +|+++|.+++..+.+++.+...+.+.-- .+++ .+. +++|+
T Consensus 12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y-----~~a~l 80 (134)
T PRK04148 12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY-----KNAKL 80 (134)
T ss_pred cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH-----hcCCE
Confidence 334456789999998 78766666667899 9999999999999998887654432111 0111 111 27899
Q ss_pred EEEcCCChHHHHHHHHhhcc
Q 019822 226 CFECTGVPSLLSEALETTKV 245 (335)
Q Consensus 226 vid~~g~~~~~~~~~~~l~~ 245 (335)
++..-..++..+.+++....
T Consensus 81 iysirpp~el~~~~~~la~~ 100 (134)
T PRK04148 81 IYSIRPPRDLQPFILELAKK 100 (134)
T ss_pred EEEeCCCHHHHHHHHHHHHH
Confidence 99888777555555554444
No 162
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.04 E-value=0.0091 Score=54.38 Aligned_cols=102 Identities=24% Similarity=0.223 Sum_probs=71.3
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhh
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+.
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~-- 145 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVP-- 145 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccc--
Confidence 355678899999999998 49999999998764 36999999998766553 45654332222 22222221
Q ss_pred hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
....+|+|+.+.+.........+.|+++ |+++..
T Consensus 146 -~~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 146 -EFAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred -ccCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 1236999999888665666788899997 987764
No 163
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.02 E-value=0.0086 Score=55.57 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=67.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---C-ceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---M-TDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---a-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
.+|||+|+|.||+.+++.+.+.+-.+|++.+++.++.+.+.+.. . ...+|-.+ . +.+.++.. ++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d---~---~al~~li~--~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD---V---DALVALIK--DFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC---h---HHHHHHHh--cCCEEE
Confidence 47999999999999999988888449999999999988886653 2 23455554 2 23333333 469999
Q ss_pred EcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 228 ECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
++.+........-.++..+ =.+++.....
T Consensus 74 n~~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 74 NAAPPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred EeCCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 9998875544444556664 4566665544
No 164
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0076 Score=53.75 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhh---hCCCCcc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGI---THGMGVD 224 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~---~~g~g~d 224 (335)
.++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ..+....+.+. .++ .+|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g-~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGG-RLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCC-Ccc
Confidence 4578999987 9999999999988999 99999999988887766665432 34433 12233333332 233 799
Q ss_pred EEEEcCC
Q 019822 225 YCFECTG 231 (335)
Q Consensus 225 ~vid~~g 231 (335)
++|++.|
T Consensus 79 ~li~~Ag 85 (277)
T PRK05993 79 ALFNNGA 85 (277)
T ss_pred EEEECCC
Confidence 9999876
No 165
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.95 E-value=0.0064 Score=57.41 Aligned_cols=76 Identities=14% Similarity=0.092 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
.-.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+ ++++...++... .+.+... .+|+|
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---------~l~~~l~--~aDiV 246 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---------ELPQLIK--KADII 246 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---------HHHHHhc--cCCEE
Confidence 34678999999999999999999999987999999998876554 556522222221 2222222 58999
Q ss_pred EEcCCChH
Q 019822 227 FECTGVPS 234 (335)
Q Consensus 227 id~~g~~~ 234 (335)
|+|++.+.
T Consensus 247 I~aT~a~~ 254 (414)
T PRK13940 247 IAAVNVLE 254 (414)
T ss_pred EECcCCCC
Confidence 99999874
No 166
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.94 E-value=0.014 Score=48.89 Aligned_cols=100 Identities=20% Similarity=0.217 Sum_probs=62.9
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCc
Q 019822 146 AKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
..+.++++||.+|+|+-+. +..+++.. +..+|++++.++.. +..+...+ .+..+ ....+.+++.....++
T Consensus 28 ~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 4568999999999876444 44444443 44489999998754 11233222 13332 3344455555555589
Q ss_pred cEEEE-cC----CC------------hHHHHHHHHhhccCCeEEEEEc
Q 019822 224 DYCFE-CT----GV------------PSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 224 d~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 254 (335)
|+|+. .. |. ...+..+.+.|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99994 32 21 24677889999997 9998764
No 167
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0067 Score=52.23 Aligned_cols=77 Identities=19% Similarity=0.342 Sum_probs=52.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++.... .|-.+ .....+.++++.. .++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~-~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQG-QRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhc-CCCCEEEE
Confidence 46899987 9999999998888999 99999998877766655542222 23332 1223333343433 37999998
Q ss_pred cCCC
Q 019822 229 CTGV 232 (335)
Q Consensus 229 ~~g~ 232 (335)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 7753
No 168
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.91 E-value=0.00093 Score=50.69 Aligned_cols=93 Identities=24% Similarity=0.307 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHhc----CC-ceE-eCCCCCCchhHHHHHHhhhCCCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGKAF----GM-TDF-INPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~-~~G~~~V~~~~~~~~~~~~~~~l----ga-~~v-~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
|+.+||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++. +. +.+ +-.. ++ . .......+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~--~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E--FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H--GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c--cCcccCCC
Confidence 678999999875 888888888 4677 999999999988887442 21 222 1111 22 1 11222337
Q ss_pred ccEEEEcC-CC---h------HHHHHHHHhhccCCeEEEEE
Q 019822 223 VDYCFECT-GV---P------SLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 223 ~d~vid~~-g~---~------~~~~~~~~~l~~~~G~~v~~ 253 (335)
||+|+... .. . ..++.+.+.|+++ |+++.-
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99999766 21 1 1378889999997 988753
No 169
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.90 E-value=0.011 Score=47.86 Aligned_cols=101 Identities=24% Similarity=0.337 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
.-.+++++|+|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +. ... +... ..|++|
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~----~a~~--~adi~v 83 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLE----EALR--DADIFV 83 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HH----HHTT--T-SEEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHH----HHHh--hCCEEE
Confidence 4678999999999999999999999999 999999998777666555653 21 122 2221 579999
Q ss_pred EcCCChHHH-HHHHHhhccCCeEEEEEccCCCccccchhHHH
Q 019822 228 ECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 268 (335)
Q Consensus 228 d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 268 (335)
.++|....+ .+-++.++++ ..+.-+|.. +.+++...+
T Consensus 84 taTG~~~vi~~e~~~~mkdg-ail~n~Gh~---d~Eid~~~L 121 (162)
T PF00670_consen 84 TATGNKDVITGEHFRQMKDG-AILANAGHF---DVEIDVDAL 121 (162)
T ss_dssp E-SSSSSSB-HHHHHHS-TT-EEEEESSSS---TTSBTHHHH
T ss_pred ECCCCccccCHHHHHHhcCC-eEEeccCcC---ceeEeeccc
Confidence 999987543 4778889886 455444443 345555444
No 170
>PRK12742 oxidoreductase; Provisional
Probab=96.88 E-value=0.029 Score=48.49 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
+++++||+|+ |.+|.++++.+...|+ +|+.+.+ ++++.+.+ ++++...+ .|..+ ...+.+.+.+. + ++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~--~-~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS--G-ALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh--C-CCcE
Confidence 4689999987 9999999999999999 8877654 44444443 44554332 23322 12233333321 2 6899
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
+|++.|.
T Consensus 79 li~~ag~ 85 (237)
T PRK12742 79 LVVNAGI 85 (237)
T ss_pred EEECCCC
Confidence 9998864
No 171
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.01 Score=52.78 Aligned_cols=78 Identities=18% Similarity=0.290 Sum_probs=54.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhh-CCCCccEEEE
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYCFE 228 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~-~g~g~d~vid 228 (335)
+++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+.+.. ...++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899987 9999999999998999 99999998888777666554433 34433 123333333332 1126999999
Q ss_pred cCCC
Q 019822 229 CTGV 232 (335)
Q Consensus 229 ~~g~ 232 (335)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 8873
No 172
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.85 E-value=0.023 Score=48.66 Aligned_cols=101 Identities=24% Similarity=0.360 Sum_probs=69.0
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELV 214 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i 214 (335)
+.....+.++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++ .|... ++..+. .
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~--- 137 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------T--- 137 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------c---
Confidence 44667789999999999874 7888888887763 399999999887766643 44322 222221 0
Q ss_pred HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
..+.....||+|+-+...+.....+.+.|+++ |+++..
T Consensus 138 ~~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 138 LGYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred cCCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01112237999986554454667888999998 998775
No 173
>PRK00536 speE spermidine synthase; Provisional
Probab=96.83 E-value=0.0046 Score=54.47 Aligned_cols=99 Identities=8% Similarity=-0.085 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC-ceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM-TDFINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
...++|||+|+|. |.++-.++|+- . +|..++.+++-.+.++++ .. ...++... ......+++... ..+|+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~-~~fDVI 143 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDI-KKYDLI 143 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccC-CcCCEE
Confidence 4568999998765 66777888875 3 999999999988888873 21 11121111 112122333222 379999
Q ss_pred E-EcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 227 F-ECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 227 i-d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
| |++-.++..+.+.++|+++ |.++.-+.
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 7 8676676788999999998 98887644
No 174
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.81 E-value=0.014 Score=52.29 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=38.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
..+++|+|+|+|++|.+++..+...|+++|+++++++++.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3567999999999999999999999998999999998887665
No 175
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.81 E-value=0.0035 Score=53.45 Aligned_cols=101 Identities=21% Similarity=0.398 Sum_probs=67.2
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELV 214 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i 214 (335)
+.+...++++++||-+|+|+ |+.++-+++..|.. .|+.++..++-.+.+ ++++...| +..+. .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---------~ 133 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---------S 133 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---------G
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---------h
Confidence 45778899999999999874 88999999988753 699999888654444 45565432 22221 1
Q ss_pred HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
.-+.....||.|+-+.+.+..-...++.|+++ |++|..
T Consensus 134 ~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 134 EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 11222337999998777665667899999998 999874
No 176
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.80 E-value=0.016 Score=47.54 Aligned_cols=97 Identities=21% Similarity=0.232 Sum_probs=63.3
Q ss_pred cccccchhhhhHHHHHhcCCCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822 129 SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207 (335)
Q Consensus 129 a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~ 207 (335)
...+|....+...+.+...--.+++|||+|+|. +|..++.+++..|+ +|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 334544334433333333456889999999986 59999999999999 8888886521
Q ss_pred hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
+..+.++ .+|+||.+++.+..+.. +.+.++ -.+++++.+.
T Consensus 80 -~l~~~l~------~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 -NLKEHTK------QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -hHHHHHh------hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 1222222 58999999998754333 346665 6777887654
No 177
>PRK14967 putative methyltransferase; Provisional
Probab=96.79 E-value=0.068 Score=46.08 Aligned_cols=98 Identities=19% Similarity=0.201 Sum_probs=63.5
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~ 218 (335)
....+.++++||-+|+|. |..++.+++. +..+|++++.+++..+.+++ .+.. .++.. ++...+
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~------d~~~~~---- 97 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG------DWARAV---- 97 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC------chhhhc----
Confidence 345677889999999986 8888888875 55599999999987776543 3432 22222 222211
Q ss_pred CCCCccEEEEcCCC---------------------------hHHHHHHHHhhccCCeEEEEEc
Q 019822 219 HGMGVDYCFECTGV---------------------------PSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 219 ~g~g~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 254 (335)
....+|+|+...+. ...+..+.+.|+++ |+++.+.
T Consensus 98 ~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 98 EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 22379999864210 11345677888897 9988653
No 178
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0068 Score=55.67 Aligned_cols=79 Identities=18% Similarity=0.313 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
+++++||+|+ |++|.++++.+...|+ +|+.+++++++++.+ ++.|... + .|-.+ .....+.+.+.. .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 5689999987 9999999999999999 999999998877643 3445432 2 23332 122222222211 2
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|++|++.|.
T Consensus 83 g-~iD~lVnnAG~ 94 (330)
T PRK06139 83 G-RIDVWVNNVGV 94 (330)
T ss_pred C-CCCEEEECCCc
Confidence 3 69999998873
No 179
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.75 E-value=0.014 Score=49.61 Aligned_cols=101 Identities=14% Similarity=0.137 Sum_probs=67.6
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCc---eEeCCCCCCchhHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISEL 213 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~---~v~~~~~~~~~~~~~~ 213 (335)
+.+...+.++++||-+|+|. |..++.+++..+ ..+|++++.+++-.+.++ +.+.. .++..+. .+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence 34566788899999999874 888888888765 238999999988666553 34432 2222221 111
Q ss_pred HHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 214 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 214 i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
+.....||.|+-+.......+.+.+.|+++ |+++..
T Consensus 137 ---~~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 ---LEKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred ---CccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 111237999986655544567888999998 998764
No 180
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.74 E-value=0.01 Score=49.85 Aligned_cols=81 Identities=15% Similarity=0.220 Sum_probs=59.3
Q ss_pred CCCEEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eEeCCCCC-CchhHHHHHHhhhCCCCcc
Q 019822 150 KGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-DFINPDDE-PNKSISELVKGITHGMGVD 224 (335)
Q Consensus 150 ~~~~VlI~G~--g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~v~~~~~~-~~~~~~~~i~~~~~g~g~d 224 (335)
..+.|||+|+ |++|.+++.=...-|+ .|+++.|+-+....+. ++|.. .=+|..+. .-..+...+++.++| +.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-kld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-KLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-ceE
Confidence 4568999974 9999999999999999 9999999999888775 77742 22443330 012245566666777 899
Q ss_pred EEEEcCCC
Q 019822 225 YCFECTGV 232 (335)
Q Consensus 225 ~vid~~g~ 232 (335)
+.++..|.
T Consensus 84 ~L~NNAG~ 91 (289)
T KOG1209|consen 84 LLYNNAGQ 91 (289)
T ss_pred EEEcCCCC
Confidence 99987764
No 181
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.73 E-value=0.011 Score=49.12 Aligned_cols=91 Identities=24% Similarity=0.438 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
.-.+++|.|+|.|.+|..++++++.+|+ +|++.+++....+.....+... .++.+.++ ..|+|+
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~------~aDiv~ 96 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA------QADIVS 96 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH------H-SEEE
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc------hhhhhh
Confidence 3468999999999999999999999999 9999999887766455555321 12333332 478888
Q ss_pred EcCCChH----HH-HHHHHhhccCCeEEEEEcc
Q 019822 228 ECTGVPS----LL-SEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 228 d~~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 255 (335)
.+....+ .+ ...++.++++ ..+|-++.
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hhhccccccceeeeeeeeeccccc-eEEEeccc
Confidence 7665321 12 3567777775 66665554
No 182
>PRK08017 oxidoreductase; Provisional
Probab=96.72 E-value=0.0083 Score=52.57 Aligned_cols=76 Identities=22% Similarity=0.362 Sum_probs=53.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHH---HHHHhhhCCCCccEE
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSIS---ELVKGITHGMGVDYC 226 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~---~~i~~~~~g~g~d~v 226 (335)
+++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+++.++..+ .|..+ ..... +.+.+...+ .+|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~-~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDN-RLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCC-CCeEE
Confidence 57999997 9999999999999999 99999999988888777775443 33332 12222 222222223 68888
Q ss_pred EEcCC
Q 019822 227 FECTG 231 (335)
Q Consensus 227 id~~g 231 (335)
+.+.|
T Consensus 79 i~~ag 83 (256)
T PRK08017 79 FNNAG 83 (256)
T ss_pred EECCC
Confidence 88766
No 183
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.68 E-value=0.02 Score=50.87 Aligned_cols=105 Identities=22% Similarity=0.353 Sum_probs=68.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E----eCCCCCCchhHHHHHHhhh-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F----INPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v----~~~~~~~~~~~~~~i~~~~- 218 (335)
.++.|+|+|+ +++|.+++.-....|+ +++.+.+..++++.+ ++.++.. + .|-.+ ..+....+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence 5788999998 8999998888888999 888888888877665 3444322 2 23222 123333332211
Q ss_pred -CCCCccEEEEcCCChH-------------------------HHHHHHHhhccCC-eEEEEEccCCC
Q 019822 219 -HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGK-GKVIVIGVGVD 258 (335)
Q Consensus 219 -~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~ 258 (335)
-| ++|+.++..|-.. ....++..+.+.+ |+++.++...+
T Consensus 88 ~fg-~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 88 HFG-RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred hcC-CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 23 7999999877311 2345566666544 89999987776
No 184
>PLN02366 spermidine synthase
Probab=96.68 E-value=0.019 Score=51.99 Aligned_cols=101 Identities=17% Similarity=0.115 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC------ceEeCCCCCCchhHHHHHHhhhCC
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM------TDFINPDDEPNKSISELVKGITHG 220 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga------~~v~~~~~~~~~~~~~~i~~~~~g 220 (335)
....++|||+|+|. |.++..++++-+..+|.+++.+++-.+.++++ .. +.-+.-.. .|....+++.. +
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~~-~ 163 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNAP-E 163 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhcc-C
Confidence 35678999998865 66777888876666899999988877777663 11 00000011 23333444432 3
Q ss_pred CCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822 221 MGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 221 ~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
..+|+|| |+.. ..+.++.+.+.|+++ |.++.-+
T Consensus 164 ~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 164 GTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 3799998 5432 123577889999998 9987653
No 185
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.68 E-value=0.0076 Score=49.58 Aligned_cols=105 Identities=23% Similarity=0.277 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC-CCCCC-------------chhHHHHHH
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN-PDDEP-------------NKSISELVK 215 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~-~~~~~-------------~~~~~~~i~ 215 (335)
++.+|+|+|+|.+|..|+.+++.+|+ +|+..+...++.+..+..++..+.. ..... +......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 45789999999999999999999999 9999999999888888877654322 10000 122233333
Q ss_pred hhhCCCCccEEEEcC---C--ChHH-HHHHHHhhccCCeEEEEEccCCC
Q 019822 216 GITHGMGVDYCFECT---G--VPSL-LSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 216 ~~~~g~g~d~vid~~---g--~~~~-~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
+... .+|++|.+. + .+.+ -+..++.+.++ ..+++++.-.+
T Consensus 98 ~~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 98 EFIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 3322 478888532 1 1212 24667788886 88888875544
No 186
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.68 E-value=0.0078 Score=53.95 Aligned_cols=76 Identities=17% Similarity=0.065 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
++++++|+|+|+.+.+++..+..+|+++|+++.|+.++.+.+ ++++... +.... ..+.+.+.. ..+|+||
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~--~~~DiVI 195 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE--KAAEVLV 195 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc--cCCCEEE
Confidence 578999999999999999999999998999999998887665 3443211 11010 001121211 2689999
Q ss_pred EcCCCh
Q 019822 228 ECTGVP 233 (335)
Q Consensus 228 d~~g~~ 233 (335)
+|++..
T Consensus 196 naTp~g 201 (282)
T TIGR01809 196 STVPAD 201 (282)
T ss_pred ECCCCC
Confidence 998753
No 187
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.65 E-value=0.041 Score=42.17 Aligned_cols=101 Identities=17% Similarity=0.318 Sum_probs=67.0
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHHh
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG 216 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~ 216 (335)
.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++ .++... ++..+. .. .+..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~---~~~~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PE---ALED 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---cc---cChh
Confidence 3455667788999999876 888999998875449999999998777764 344322 222221 10 0111
Q ss_pred hhCCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEE
Q 019822 217 ITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 217 ~~~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 253 (335)
. . ..+|+|+...+. ...++.+.+.|+++ |+++..
T Consensus 85 ~-~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 85 S-L-PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred h-c-CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 1 1 279999965432 23678899999997 998764
No 188
>PRK06182 short chain dehydrogenase; Validated
Probab=96.64 E-value=0.014 Score=51.88 Aligned_cols=80 Identities=19% Similarity=0.246 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhh-CCCCccEE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYC 226 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~-~g~g~d~v 226 (335)
++++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|-.+ ..++.+.+++.. ...++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3578999987 9999999999988999 99999999888776655554332 34333 233333344321 11279999
Q ss_pred EEcCCC
Q 019822 227 FECTGV 232 (335)
Q Consensus 227 id~~g~ 232 (335)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 998873
No 189
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.041 Score=47.52 Aligned_cols=80 Identities=18% Similarity=0.217 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---CceEe--CCCCCCchhHHHHHHhhhC-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MTDFI--NPDDEPNKSISELVKGITH-GM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~~v~--~~~~~~~~~~~~~i~~~~~-g~ 221 (335)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. .-+.+ |-.+ ...+.+.+++... ..
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999998888899 899999988766544 3332 11222 3222 2333333433221 12
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
++|++|++.+.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 68999988763
No 190
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.63 E-value=0.0023 Score=56.91 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=62.5
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc---eEeCCCCCCchhHHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISELV 214 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~---~v~~~~~~~~~~~~~~i 214 (335)
+.+++++++|++||-+|+| -|..++.+++..|+ +|++++.|++..++++ +.|.. .+... + .
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~------D----~ 121 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ------D----Y 121 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----------G
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe------e----c
Confidence 4577899999999999987 47788889998899 9999999999988874 34521 12111 1 1
Q ss_pred HhhhCCCCccEEEE-----cCCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822 215 KGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 215 ~~~~~g~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+++.. .||.|+. .+|. +..++.+.+.|+|+ |+++.-..
T Consensus 122 ~~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 122 RDLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred cccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 22222 7898875 3442 34678899999998 99875543
No 191
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.016 Score=50.27 Aligned_cols=77 Identities=18% Similarity=0.296 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
++++++|+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ ++.+...+ .|..+ ......+.+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~--~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA--AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH--hCCCCEE
Confidence 5678999987 9999999999999999 999999988777655 33444322 34333 2222222221 2268999
Q ss_pred EEcCCC
Q 019822 227 FECTGV 232 (335)
Q Consensus 227 id~~g~ 232 (335)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 998874
No 192
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.61 E-value=0.036 Score=54.10 Aligned_cols=47 Identities=21% Similarity=0.174 Sum_probs=39.7
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 144 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
+..+.+.+++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 3455678899999987 9999999999988999 999999998876543
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.041 Score=47.86 Aligned_cols=80 Identities=19% Similarity=0.167 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DFI--NPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+ ++.+.. .++ |-.+ ..+..+.+.+... -
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4688999987 9999999999998999 899999888765543 223322 122 3332 1222222222111 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 194
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.018 Score=55.77 Aligned_cols=73 Identities=18% Similarity=0.259 Sum_probs=55.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
+.++++|+|+|.|.+|++++++++..|+ +|++++..+++.+.++++|+.. +.... ..+.+ +.+|+|+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l------~~~D~VV 75 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQI------ADYALVV 75 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHh------hcCCEEE
Confidence 5578899999999999999999999999 9999998777766677778743 32221 11122 2579999
Q ss_pred EcCCCh
Q 019822 228 ECTGVP 233 (335)
Q Consensus 228 d~~g~~ 233 (335)
.+.|-+
T Consensus 76 ~SpGi~ 81 (488)
T PRK03369 76 TSPGFR 81 (488)
T ss_pred ECCCCC
Confidence 988764
No 195
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.02 Score=50.82 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=52.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-EeCCCCCCchhHHHHHHhhh--CCCCcc
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGIT--HGMGVD 224 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d 224 (335)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++ ... ..|-.+ +.++.+.+.+.. .+ ++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~-~id 80 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLG-PID 80 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcC-CCC
Confidence 578999987 9999999998888899 899999988877654 4444 221 224333 233333333322 13 689
Q ss_pred EEEEcCCC
Q 019822 225 YCFECTGV 232 (335)
Q Consensus 225 ~vid~~g~ 232 (335)
++|++.|.
T Consensus 81 ~li~~ag~ 88 (273)
T PRK07825 81 VLVNNAGV 88 (273)
T ss_pred EEEECCCc
Confidence 99998873
No 196
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.51 E-value=0.016 Score=51.36 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=75.8
Q ss_pred hhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eE--eCCCCCCch
Q 019822 138 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DF--INPDDEPNK 208 (335)
Q Consensus 138 a~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v--~~~~~~~~~ 208 (335)
+...+.+..+++||.+||=+|+|- |.+++.+|+..|. +|++++-|++..+++++ .|.. .+ -|+++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 334456889999999999999875 7888999999999 99999999999888754 4432 12 12222
Q ss_pred hHHHHHHhhhCCCCccEEEE-----cCCC---hHHHHHHHHhhccCCeEEEEEccCCC
Q 019822 209 SISELVKGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 209 ~~~~~i~~~~~g~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
+. + .||-|+. -+|. +..+..+.+.|+++ |++.+......
T Consensus 134 --------~~-e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 134 --------FE-E-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred --------cc-c-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 21 2 3777764 4443 34678889999998 99988876554
No 197
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.50 E-value=0.024 Score=50.43 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=50.8
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822 146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVD 224 (335)
Q Consensus 146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d 224 (335)
.+...+++++|+|+|+.+++++..++..|+++|+++.|++++.+.+. .++.. +...+. ...+|
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~~----~~~~d 180 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDLG----GIEAD 180 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhcc----cccCC
Confidence 34455678999999999999999999999978999999998877653 34311 100111 12589
Q ss_pred EEEEcCC
Q 019822 225 YCFECTG 231 (335)
Q Consensus 225 ~vid~~g 231 (335)
+||+|++
T Consensus 181 lvINaTp 187 (272)
T PRK12550 181 ILVNVTP 187 (272)
T ss_pred EEEECCc
Confidence 9999986
No 198
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.47 E-value=0.054 Score=45.38 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
+.++.+||-+|+|+ |..++.+++.....+|++++.+++..+.++ +.+.+.+ .... .+.. +......+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~----~~~~~~~f 113 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAE----EFGQEEKF 113 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHh----hCCCCCCc
Confidence 44588999999864 666677776544339999999988776664 3444322 1111 1121 12223379
Q ss_pred cEEEEc-CCC-hHHHHHHHHhhccCCeEEEEEcc
Q 019822 224 DYCFEC-TGV-PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 224 d~vid~-~g~-~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
|+|+.. ... +..++.+.+.|+++ |+++.+-.
T Consensus 114 DlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~~ 146 (187)
T PRK00107 114 DVVTSRAVASLSDLVELCLPLLKPG-GRFLALKG 146 (187)
T ss_pred cEEEEccccCHHHHHHHHHHhcCCC-eEEEEEeC
Confidence 999853 322 34677889999998 99988843
No 199
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.045 Score=47.65 Aligned_cols=102 Identities=19% Similarity=0.182 Sum_probs=60.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
+++++||+|+ |.+|..++..+...|+ +|+++.++.+ +.+.+ +..+.. .. .|..+ +.+....+++...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999987 9999999999888999 8988887643 33222 222322 11 23332 2233333333221
Q ss_pred CCCccEEEEcCCCh-------------------HHHHHHHHhhccCCeEEEEEcc
Q 019822 220 GMGVDYCFECTGVP-------------------SLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 220 g~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
..++|+++.+.+.. ..++.+.+.+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 12689998877532 1334455555555 78888865
No 200
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.45 E-value=0.055 Score=46.82 Aligned_cols=93 Identities=16% Similarity=0.217 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHhcCCceEeCCCCCCchhHHHHH
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAA--KIIGIDKN----PWK--------KEKGKAFGMTDFINPDDEPNKSISELV 214 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~--~V~~~~~~----~~~--------~~~~~~lga~~v~~~~~~~~~~~~~~i 214 (335)
-.+.+++|+|+|+.|.+++..+...|.+ +++.++++ +++ .+++++++... . . .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 5678999999999999999999999997 89999988 343 23344443211 1 0 1232333
Q ss_pred HhhhCCCCccEEEEcCCChHHH-HHHHHhhccCCeEEEEEccC
Q 019822 215 KGITHGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 215 ~~~~~g~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 256 (335)
+ ++|++|++++.. .+ ...++.+.++ ..+..+..+
T Consensus 96 ~------~~dvlIgaT~~G-~~~~~~l~~m~~~-~ivf~lsnP 130 (226)
T cd05311 96 K------GADVFIGVSRPG-VVKKEMIKKMAKD-PIVFALANP 130 (226)
T ss_pred h------cCCEEEeCCCCC-CCCHHHHHhhCCC-CEEEEeCCC
Confidence 1 489999999732 33 3666777775 555555533
No 201
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.022 Score=49.93 Aligned_cols=80 Identities=19% Similarity=0.255 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-EeCCCCCCchhHHHHHHhhh-CCCCccE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-FINPDDEPNKSISELVKGIT-HGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~-~g~g~d~ 225 (335)
++++|||+|+ |.+|.++++.+...|+ +|+++++++.+.+.. ++++... ..|..+ .......+.+.. ...++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999987 9999999999999999 999999888776554 4444322 223333 122222333221 1126899
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9988763
No 202
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.44 E-value=0.011 Score=50.65 Aligned_cols=101 Identities=20% Similarity=0.269 Sum_probs=66.8
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELV 214 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i 214 (335)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.++ ++|.+. ++..+ ....
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~- 140 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQG- 140 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccC-
Confidence 44567788999999999874 7777888887653 36999999988776653 345332 22111 1111
Q ss_pred HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
......||+|+-..........+.+.|+++ |+++..
T Consensus 141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 111237999885444444567888999997 998765
No 203
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.026 Score=49.87 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc-eE--eCCCCCCchhHHHHHHhhhCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMT-DF--INPDDEPNKSISELVKGITHG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----ga~-~v--~~~~~~~~~~~~~~i~~~~~g 220 (335)
+++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. ++ +.. .. .|-.+ +.+..+.+.+...-
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4788999987 8999999999999999 9999999887765542 22 321 12 23332 23333333332221
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 268999998874
No 204
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.43 E-value=0.058 Score=44.08 Aligned_cols=90 Identities=19% Similarity=0.220 Sum_probs=58.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
.+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+... + +..+.++ ..|+||-|+.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~-------s~~e~~~------~~dvvi~~v~ 66 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D-------SPAEAAE------QADVVILCVP 66 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S-------SHHHHHH------HBSEEEE-SS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h-------hhhhHhh------cccceEeecc
Confidence 368889999999999998888999 99999999999998887775322 1 1222222 3589998888
Q ss_pred ChHHHHHHHH------hhccCCeEEEEEccCC
Q 019822 232 VPSLLSEALE------TTKVGKGKVIVIGVGV 257 (335)
Q Consensus 232 ~~~~~~~~~~------~l~~~~G~~v~~g~~~ 257 (335)
.....+..+. .+.++ ..++.++...
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred cchhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 7555554433 34454 5666665544
No 205
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.048 Score=50.13 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~ 219 (335)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|... ..|..+ ..+..+.+.+.. -
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999987 9999999999998999 999999988776543 3345332 134333 122333332221 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|++|++.|.
T Consensus 84 g-~iD~lInnAg~ 95 (334)
T PRK07109 84 G-PIDTWVNNAMV 95 (334)
T ss_pred C-CCCEEEECCCc
Confidence 3 68999998874
No 206
>PRK00811 spermidine synthase; Provisional
Probab=96.43 E-value=0.02 Score=51.39 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC------C--c---eEeCCCCCCchhHHHHHHhh
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M--T---DFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------a--~---~v~~~~~~~~~~~~~~i~~~ 217 (335)
..+++||++|+|. |..+..+++..+..+|.+++.+++-.+.++++- . + .++. .+....+++
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999999865 777778888767669999999998888876531 1 1 1221 223333433
Q ss_pred hCCCCccEEE-EcCCC---------hHHHHHHHHhhccCCeEEEEE
Q 019822 218 THGMGVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 218 ~~g~g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 253 (335)
. ...+|+|+ |+... .+.++.+.+.|+++ |.++.-
T Consensus 147 ~-~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 147 T-ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred C-CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 2 33799998 43211 23457888999998 998865
No 207
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.035 Score=48.94 Aligned_cols=80 Identities=18% Similarity=0.177 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
.++++||+|+ |.+|.++++.+...|+ +|+.++++.++.+.+ ++++.. .. .|-.+ ..+..+.+++... -..+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999987 9999999999999999 999999988765554 444422 12 23332 1233333333211 1268
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|++|++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998763
No 208
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.028 Score=49.37 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=51.1
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhh-HHH----HHhcCC--ceE--eCCCCCCchhHHHHHHh
Q 019822 148 VEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWK-KEK----GKAFGM--TDF--INPDDEPNKSISELVKG 216 (335)
Q Consensus 148 ~~~~~~VlI~G~-g~vG~~ai~la~~~-G~~~V~~~~~~~~~-~~~----~~~lga--~~v--~~~~~~~~~~~~~~i~~ 216 (335)
+..+++|||+|+ |++|.++++-+... |+ +|+.+++++++ .+. +++.+. .++ .|-.+ ..+..+.+++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence 467789999987 99999999876666 57 99999988765 332 233332 122 23322 1333333444
Q ss_pred hhCCCCccEEEEcCCC
Q 019822 217 ITHGMGVDYCFECTGV 232 (335)
Q Consensus 217 ~~~g~g~d~vid~~g~ 232 (335)
.....++|+++++.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 3322379999987754
No 209
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.03 Score=49.07 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC-ceEe--CCCCCCchhHHHHHHhhh-C
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDFI--NPDDEPNKSISELVKGIT-H 219 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga-~~v~--~~~~~~~~~~~~~i~~~~-~ 219 (335)
..++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+. ..++ |-.+ ..++.+.+++.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 35789999987 9999999999999999 99999998887655422 121 1222 3222 133333333321 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
..++|++|++.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (258)
T PRK06949 84 AGTIDILVNNSGV 96 (258)
T ss_pred cCCCCEEEECCCC
Confidence 1268999998873
No 210
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.37 E-value=0.039 Score=49.44 Aligned_cols=43 Identities=26% Similarity=0.243 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
..++++||+|+|+.+.+++.-+...|+++++++.|+.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 4578999999999999999888889998999999998887665
No 211
>PRK06196 oxidoreductase; Provisional
Probab=96.36 E-value=0.028 Score=51.09 Aligned_cols=79 Identities=18% Similarity=0.284 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-EeCCCCCCchhHHHHHHhhhC-CCCcc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGITH-GMGVD 224 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~~-g~g~d 224 (335)
.++++||+|+ |.+|.+++..+...|+ +|++++++.++.+.+ +++. ... ..|-.+ .....+.+.+... ..++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4678999987 9999999998888999 999999988766543 3332 211 123332 1223333333221 12799
Q ss_pred EEEEcCC
Q 019822 225 YCFECTG 231 (335)
Q Consensus 225 ~vid~~g 231 (335)
++|++.|
T Consensus 102 ~li~nAg 108 (315)
T PRK06196 102 ILINNAG 108 (315)
T ss_pred EEEECCC
Confidence 9999887
No 212
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.35 E-value=0.029 Score=49.93 Aligned_cols=78 Identities=14% Similarity=0.286 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHH---HH-HhcCCceE--eCCCCCCchhHHHHHHhhhC-
Q 019822 150 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKE---KG-KAFGMTDF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 150 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~---~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
+++++||+|+ + ++|.+.++.+...|+ +|+.++++++..+ .+ +++|.... .|-.+ ..+..+.+++...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 5688999987 4 899999999999999 9998887653222 22 33453322 23332 2233333333221
Q ss_pred -CCCccEEEEcCC
Q 019822 220 -GMGVDYCFECTG 231 (335)
Q Consensus 220 -g~g~d~vid~~g 231 (335)
| .+|+++++.|
T Consensus 83 ~g-~iD~lVnnAG 94 (271)
T PRK06505 83 WG-KLDFVVHAIG 94 (271)
T ss_pred hC-CCCEEEECCc
Confidence 3 6999999887
No 213
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.039 Score=49.22 Aligned_cols=95 Identities=21% Similarity=0.302 Sum_probs=65.2
Q ss_pred ccccchhhhhHHHHHhcC-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822 130 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207 (335)
Q Consensus 130 ~l~~~~~ta~~~l~~~~~-~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~ 207 (335)
.+||....... +.+..+ --.|++|+|+|.|. +|..++.++...|+ +|+++.+..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 34544333333 334444 35789999999855 99999999999999 998887431
Q ss_pred hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
.++.+.++ .+|+||.++|.+..+.. +.++++ ..++++|...
T Consensus 193 ~~l~~~~~------~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 193 KDMASYLK------DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hhHHHHHh------hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 11222222 58999999998865554 457886 8888988754
No 214
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.33 E-value=0.042 Score=47.23 Aligned_cols=96 Identities=25% Similarity=0.245 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
-++.+||=+|+|+ |+++.-+|+ +|+ +|+++|-+++..+.++...... -++|.. ...+.+.+ .+..||+|
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~--~~~~FDvV 128 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLAS--AGGQFDVV 128 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHh--cCCCccEE
Confidence 5788999999864 666666665 778 9999999999999886543211 134543 22333322 23589999
Q ss_pred EE-----cCCCh-HHHHHHHHhhccCCeEEEEEc
Q 019822 227 FE-----CTGVP-SLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 227 id-----~~g~~-~~~~~~~~~l~~~~G~~v~~g 254 (335)
+. =+..+ ..+..+.+.++|+ |.+...-
T Consensus 129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 85 23333 3667899999997 8776553
No 215
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.33 E-value=0.034 Score=52.00 Aligned_cols=98 Identities=19% Similarity=0.203 Sum_probs=67.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
--.+.++||+|+|-+|..++..+...|..+|++..|+.++-+. ++++|+. ++..+ .+..... .+|+|
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---------el~~~l~--~~DvV 242 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---------ELLEALA--EADVV 242 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---------HHHHhhh--hCCEE
Confidence 3478899999999999999999999998899999999887665 5788843 22222 2222222 58999
Q ss_pred EEcCCChHH-H--HHHHHhhccCCe-EEEEEccCC
Q 019822 227 FECTGVPSL-L--SEALETTKVGKG-KVIVIGVGV 257 (335)
Q Consensus 227 id~~g~~~~-~--~~~~~~l~~~~G-~~v~~g~~~ 257 (335)
|.+++.+.. + ......+..... -+++++.+-
T Consensus 243 issTsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 243 ISSTSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred EEecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 999887632 1 344445554423 355665543
No 216
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.32 E-value=0.028 Score=45.29 Aligned_cols=96 Identities=24% Similarity=0.210 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
.++.+++|+|+|.+|...++.+...|..+|+++++++++.+. +++++... ..... +.. +. -.++|+|
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~--~~~~Dvv 85 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL-----DLE----EL--LAEADLI 85 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec-----chh----hc--cccCCEE
Confidence 457889999999999999998888864489999998877665 45555321 01111 111 11 1379999
Q ss_pred EEcCCChHH----HHHHHHhhccCCeEEEEEccC
Q 019822 227 FECTGVPSL----LSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 227 id~~g~~~~----~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+.|++.... .......++++ ..+++++..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~ 118 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN 118 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence 999876521 11122345564 566666443
No 217
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.029 Score=50.53 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--ce-E--eCCCCCCchhHHHHHHhhh--CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TD-F--INPDDEPNKSISELVKGIT--HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~~-v--~~~~~~~~~~~~~~i~~~~--~g 220 (335)
+++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++. .. . .|-.+ ..+..+.+.+.. .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999987 9999999999999999 999999988876654 44542 11 1 33332 122333333321 13
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
++|++|++.|.
T Consensus 85 -~id~vI~nAG~ 95 (296)
T PRK05872 85 -GIDVVVANAGI 95 (296)
T ss_pred -CCCEEEECCCc
Confidence 69999998874
No 218
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.31 E-value=0.052 Score=46.41 Aligned_cols=108 Identities=18% Similarity=0.254 Sum_probs=75.2
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCce-EeCCCCCCchhHHHHHHhh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD-FINPDDEPNKSISELVKGI 217 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~-v~~~~~~~~~~~~~~i~~~ 217 (335)
..++..+.++||=+|.+ +|+.++.+|..+. -.+++.++.++++.+.++ +.|... |.-... .+..+.+.+.
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~~~ 128 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLSRL 128 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHHhc
Confidence 34566788899988864 4888999998876 348999999999887764 456543 221111 2455666653
Q ss_pred hCCCCccEEE-EcC--CChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 218 THGMGVDYCF-ECT--GVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 218 ~~g~g~d~vi-d~~--g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
..+ .||+|| |+- ..+..++.+++.|+++ |.++.=....
T Consensus 129 ~~~-~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~ 169 (219)
T COG4122 129 LDG-SFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF 169 (219)
T ss_pred cCC-CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence 334 899998 654 3567889999999997 8777655443
No 219
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.30 E-value=0.17 Score=42.91 Aligned_cols=82 Identities=28% Similarity=0.393 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
-.+.+++|+|.|.+|..+++.+...|+ +|+++++++++.+.++ .+++. .++..+ +.. ..+|+++
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~-~~~Dv~v 90 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYS-VDADVFA 90 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hcc-ccCCEEE
Confidence 467899999999999999999999999 9999999888777664 44653 333321 111 2689999
Q ss_pred EcCCChHHHHHHHHhhcc
Q 019822 228 ECTGVPSLLSEALETTKV 245 (335)
Q Consensus 228 d~~g~~~~~~~~~~~l~~ 245 (335)
-|......-...++.+..
T Consensus 91 p~A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 91 PCALGGVINDDTIPQLKA 108 (200)
T ss_pred ecccccccCHHHHHHcCC
Confidence 665443233455566654
No 220
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.034 Score=48.99 Aligned_cols=81 Identities=19% Similarity=0.298 Sum_probs=52.7
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCceE----eCCCCCCchhHHHHHHh
Q 019822 148 VEKGSSVAVLGL-G-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTDF----INPDDEPNKSISELVKG 216 (335)
Q Consensus 148 ~~~~~~VlI~G~-g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~~v----~~~~~~~~~~~~~~i~~ 216 (335)
+.+++++||+|+ | ++|.++++.+...|+ +|+++++++++.+... + ++...+ .|..+ +......+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 345789999986 6 799999999999999 8999998877665432 1 443222 23332 1223333322
Q ss_pred hh--CCCCccEEEEcCCC
Q 019822 217 IT--HGMGVDYCFECTGV 232 (335)
Q Consensus 217 ~~--~g~g~d~vid~~g~ 232 (335)
.. .+ ++|++|++.|.
T Consensus 91 ~~~~~g-~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLG-RLDVLVNNAGL 107 (262)
T ss_pred HHHHcC-CCCEEEECCCC
Confidence 21 13 68999999874
No 221
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.04 Score=47.24 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=52.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
+++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+... ..|-.+ ...+...+.++ .+.++|+++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKL-DGEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHh-cCCCCCEEEEC
Confidence 46889986 9999999998878899 8999999888777776655432 233333 12233333333 33379999987
Q ss_pred CCC
Q 019822 230 TGV 232 (335)
Q Consensus 230 ~g~ 232 (335)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 764
No 222
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.28 E-value=0.033 Score=49.13 Aligned_cols=78 Identities=17% Similarity=0.199 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eE--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-DF--INPDDEPNKSISELVKGIT--HGMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~g 222 (335)
+++++||+|+ +++|..+++.+...|+ +|+.+++++++.+.+. +++.. .. .|-.+ ..+....+++.. .+ .
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~ 80 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFG-K 80 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcC-C
Confidence 5678999987 9999999999999999 9999999888776653 33321 12 23222 122333333321 12 6
Q ss_pred ccEEEEcCC
Q 019822 223 VDYCFECTG 231 (335)
Q Consensus 223 ~d~vid~~g 231 (335)
+|++|++.|
T Consensus 81 id~li~~ag 89 (263)
T PRK06200 81 LDCFVGNAG 89 (263)
T ss_pred CCEEEECCC
Confidence 899999877
No 223
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.28 E-value=0.016 Score=51.84 Aligned_cols=94 Identities=19% Similarity=0.169 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
..+++++|+|+|++|.+++..++..|+.+|+++.++.++.+.+ ++++....+.. + .+. .+.. .++|+||
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~----~~~~--~~~DivI 190 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LEL----QEEL--ADFDLII 190 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccc----hhcc--ccCCEEE
Confidence 4567899999999999999999999966999999998887665 33432110111 1 001 1111 2689999
Q ss_pred EcCCChHH-----HHHHHHhhccCCeEEEEE
Q 019822 228 ECTGVPSL-----LSEALETTKVGKGKVIVI 253 (335)
Q Consensus 228 d~~g~~~~-----~~~~~~~l~~~~G~~v~~ 253 (335)
+|++.... .......+.+. ..++++
T Consensus 191 naTp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 191 NATSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred ECCcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 99864310 01123456665 566665
No 224
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.28 E-value=0.019 Score=48.56 Aligned_cols=100 Identities=21% Similarity=0.304 Sum_probs=63.2
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhhC
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~ 219 (335)
+.....++.+||-+|+|. |..++.+++. |. +|++++.+++-.+.+++. +...+ .... .++ .+..-
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~----~~~~~ 92 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDL----NNLTF 92 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cCh----hhCCc
Confidence 444556778999999875 7778888875 77 999999999877766442 22211 1111 111 11111
Q ss_pred CCCccEEEEcCC----C----hHHHHHHHHhhccCCeEEEEEcc
Q 019822 220 GMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 220 g~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
...+|+|+.+.. . ...+..+.+.|+++ |.++.+..
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~ 135 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA 135 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence 236999997533 1 24567888899998 99665543
No 225
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.27 E-value=0.043 Score=49.82 Aligned_cols=91 Identities=26% Similarity=0.451 Sum_probs=61.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 230 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~ 230 (335)
.+|.|+|.|.+|.+.+..++..|. .+|+++++++++.+.+++.|...... .+..+.+ .+.|+||.|+
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~------~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV------KGADLVILCV 74 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh------cCCCEEEECC
Confidence 579999999999999998888884 38999999999888888887532111 1111111 2589999999
Q ss_pred CChHH---HHHHHHhhccCCeEEEEEcc
Q 019822 231 GVPSL---LSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 231 g~~~~---~~~~~~~l~~~~G~~v~~g~ 255 (335)
..... +..+...++++ ..++.++.
T Consensus 75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 75 PVGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 76422 33333445564 56666544
No 226
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.27 E-value=0.013 Score=52.30 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=39.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 193 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~ 193 (335)
.++++++|+|+|+.+.+++.-++..|+++++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 357899999999999999999999998799999999998777643
No 227
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.24 E-value=0.01 Score=56.86 Aligned_cols=94 Identities=12% Similarity=0.123 Sum_probs=61.8
Q ss_pred HhcCCCCCCEEE----EEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhh
Q 019822 144 KEAKVEKGSSVA----VLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 144 ~~~~~~~~~~Vl----I~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~ 217 (335)
...++++++++| |+|+ |++|.+++|+++..|+ +|+++...+.+....+..+.+ .+++... ..+.+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 346677888887 7765 9999999999999999 999988666544333333433 4565554 3333333322
Q ss_pred hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
. ..+...++.+.++ |+++.++...
T Consensus 103 ~---------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 103 Y---------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred H---------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 1 2445666777776 7888776554
No 228
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.028 Score=49.36 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=53.9
Q ss_pred cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc--eE--eCCCCCCchhHHHHHH---h
Q 019822 146 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMT--DF--INPDDEPNKSISELVK---G 216 (335)
Q Consensus 146 ~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~--~v--~~~~~~~~~~~~~~i~---~ 216 (335)
.+..++.++||+|+ |.+|..++..+...|+ +|+.+.++++..+.+.+ ..-. .+ .|-.+ +......+. +
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 82 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVE 82 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHH
Confidence 34457889999987 9999999999999999 89999998776665433 2211 12 23332 122222222 2
Q ss_pred hhCCCCccEEEEcCCC
Q 019822 217 ITHGMGVDYCFECTGV 232 (335)
Q Consensus 217 ~~~g~g~d~vid~~g~ 232 (335)
.. + ++|.||.+.|.
T Consensus 83 ~~-~-~~d~vi~~ag~ 96 (264)
T PRK12829 83 RF-G-GLDVLVNNAGI 96 (264)
T ss_pred Hh-C-CCCEEEECCCC
Confidence 22 2 69999998874
No 229
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.23 E-value=0.0071 Score=45.39 Aligned_cols=89 Identities=22% Similarity=0.252 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
.+.+|||+|+|.+|..-++.+...|+ +|++++... +..++. . ... .+ .+. +.. .++++|+-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~~-i-~~~-~~-----~~~----~~l--~~~~lV~~a 67 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEGL-I-QLI-RR-----EFE----EDL--DGADLVFAA 67 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHTS-C-EEE-ES-----S-G----GGC--TTESEEEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhhH-H-HHH-hh-----hHH----HHH--hhheEEEec
Confidence 57899999999999999999999999 999999765 222211 1 111 11 121 111 269999999
Q ss_pred CCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 230 TGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
++.+..-+.+....... +.++-+.+..
T Consensus 68 t~d~~~n~~i~~~a~~~-~i~vn~~D~p 94 (103)
T PF13241_consen 68 TDDPELNEAIYADARAR-GILVNVVDDP 94 (103)
T ss_dssp SS-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred CCCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence 99885545555555555 7777665543
No 230
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.039 Score=49.68 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +.+.. .. .|-.+ .....+.+++.. -
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 3578999987 9999999999888899 9999999987765542 22322 12 23222 122333333221 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|++|++.|.
T Consensus 116 g-~id~li~~AG~ 127 (293)
T PRK05866 116 G-GVDILINNAGR 127 (293)
T ss_pred C-CCCEEEECCCC
Confidence 3 68999998874
No 231
>PRK04457 spermidine synthase; Provisional
Probab=96.22 E-value=0.059 Score=47.74 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC----c--eEeCCCCCCchhHHHHHHhhhCCC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM----T--DFINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga----~--~v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
.++++||++|+|+ |..+..+++.....+|++++.+++-.+.+++. +. + .++. .|..+.+.+. . .
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~-~ 135 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-R-H 135 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-C-C
Confidence 4567899999875 77888888877544999999999988888663 21 1 1222 2334444433 2 3
Q ss_pred CccEEE-EcCCC---------hHHHHHHHHhhccCCeEEEEE
Q 019822 222 GVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 222 g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 253 (335)
.+|+|+ |.... .+.++.+.+.|+++ |+++..
T Consensus 136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 799997 54322 35778999999998 998873
No 232
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.22 E-value=0.045 Score=46.45 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 56789999999999999999999999899999976
No 233
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.077 Score=50.86 Aligned_cols=79 Identities=15% Similarity=0.219 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHH-HHhcCCce-EeCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~-~~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
+++++||+|+ |++|..+++.+...|+ +|+.+++++ ++.+. .++++... .+|-.+ .......+..... ..++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence 5788999987 9999999999999999 899888743 22222 34455432 234433 1222222222211 1168
Q ss_pred cEEEEcCC
Q 019822 224 DYCFECTG 231 (335)
Q Consensus 224 d~vid~~g 231 (335)
|++|++.|
T Consensus 286 d~vi~~AG 293 (450)
T PRK08261 286 DIVVHNAG 293 (450)
T ss_pred CEEEECCC
Confidence 99999987
No 234
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.21 E-value=0.046 Score=47.34 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=76.5
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHh
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKG 216 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~ 216 (335)
+....++.++++|+=.|.|+ |.+++-||++.|. .+|+..+..++..+.+ +++|....+.... .| +++
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~D----v~~ 157 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GD----VRE 157 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cc----ccc
Confidence 34678999999999888764 8899999998875 5999999988876665 4455433222211 22 333
Q ss_pred hhCCCCccEEE-EcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 217 ITHGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 217 ~~~g~g~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
...+..+|.|| |--.-...++.+.+.|.++ |+++.+....
T Consensus 158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~v 198 (256)
T COG2519 158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTV 198 (256)
T ss_pred cccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCH
Confidence 33344899887 6555557889999999998 9999997654
No 235
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.044 Score=48.26 Aligned_cols=80 Identities=16% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc--CC-ceE--eCCCCCCchhHHHHHHhhhCCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF--GM-TDF--INPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l--ga-~~v--~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
+++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. ++ +. ... .|-.+ .....+.++......+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 4678999986 9999999999888999 9999999887766553 22 21 112 22222 1222222222211237
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|.++++.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999998774
No 236
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.038 Score=48.06 Aligned_cols=78 Identities=19% Similarity=0.304 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHH---HHHHhhhCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSIS---ELVKGITHGM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~---~~i~~~~~g~ 221 (335)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++++... . .|..+ ..+.. +.+.+.. +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-~- 79 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAF-G- 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHh-C-
Confidence 4678999987 9999999999999999 999999887766544 4455432 1 23222 12222 2222222 2
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
++|++|++.|.
T Consensus 80 ~id~vi~~ag~ 90 (249)
T PRK06500 80 RLDAVFINAGV 90 (249)
T ss_pred CCCEEEECCCC
Confidence 68999998763
No 237
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.15 E-value=0.16 Score=46.46 Aligned_cols=102 Identities=15% Similarity=0.165 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHH-HHcCCCEEEEEcCChhhHHHH-Hh----cCCceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGA-RMHGAAKIIGIDKNPWKKEKG-KA----FGMTDFINPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la-~~~G~~~V~~~~~~~~~~~~~-~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
...++++|+|+|..|...+..+ ...++++|.++++++++.+.+ ++ ++.. +....+ ..+.+ .+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~-----~~~~~------~~ 192 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS-----ADEAI------EE 192 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC-----HHHHH------hc
Confidence 4567899999999998776554 466888999999998887654 32 3432 111221 22222 26
Q ss_pred ccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchh
Q 019822 223 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 265 (335)
Q Consensus 223 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~ 265 (335)
.|+|+.|+++... ... +.++++ -+++.+|.......+++.
T Consensus 193 aDiVi~aT~s~~p-~i~-~~l~~G-~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 193 ADIIVTVTNAKTP-VFS-EKLKKG-VHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCEEEEccCCCCc-chH-HhcCCC-cEEEecCCCCcccccCCH
Confidence 8999999987633 233 788887 788899876654445554
No 238
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.14 E-value=0.027 Score=50.07 Aligned_cols=98 Identities=23% Similarity=0.245 Sum_probs=71.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--EeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
++.+|.|+|+|.+|.-++.+|-.+|+ +|...+.+.+|++.+..+-..+ ++-++. .++.+.++ +.|++|
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v~------~aDlvI 236 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAVK------KADLVI 236 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHhh------hccEEE
Confidence 45678888999999999999999999 9999999999999986643323 232222 33443333 589999
Q ss_pred EcC---CC--hH-HHHHHHHhhccCCeEEEEEccCCC
Q 019822 228 ECT---GV--PS-LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 228 d~~---g~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
.++ |. +. ..++..+.+.++ +.++++....+
T Consensus 237 gaVLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 237 GAVLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EEEEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 765 21 21 346779999997 99999875554
No 239
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.041 Score=49.00 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eE--eCCCCCCchhHHHHHHhhhCC-CCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DF--INPDDEPNKSISELVKGITHG-MGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~~~~~i~~~~~g-~g~ 223 (335)
.++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+.... .. .|-.+ .......+++.... .++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3568999987 9999999999988999 999999998887666443211 11 23332 12233333322111 158
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|+++++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999998875
No 240
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.033 Score=48.76 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=49.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eE--eCCCCCCchhHHHHHHhhhCCCC
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DF--INPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+++ .+.. .+ .|..+ . ..+++...+ +
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~-~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEW-D 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcC-C
Confidence 457999987 9999999999999999 99999988776554432 2321 11 23332 2 223333333 7
Q ss_pred ccEEEEcCC
Q 019822 223 VDYCFECTG 231 (335)
Q Consensus 223 ~d~vid~~g 231 (335)
+|++|++.|
T Consensus 74 id~vi~~ag 82 (257)
T PRK09291 74 VDVLLNNAG 82 (257)
T ss_pred CCEEEECCC
Confidence 999999877
No 241
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.12 E-value=0.05 Score=47.33 Aligned_cols=107 Identities=18% Similarity=0.184 Sum_probs=68.1
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhh
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
....+..+.++||-+|.| .|..++.+++.++ ..+|+.++.+++..+.++ +.|...-+.... .+..+.+.++
T Consensus 61 ~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l 136 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL 136 (234)
T ss_pred HHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence 344566778899999975 3667777777653 349999999998777664 345322111111 3344444444
Q ss_pred hC---CCCccEEE-EcC--CChHHHHHHHHhhccCCeEEEEEc
Q 019822 218 TH---GMGVDYCF-ECT--GVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 218 ~~---g~g~d~vi-d~~--g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
.. ...||+|| |+- .....++.+++.++++ |.++.-.
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 21 24799998 542 2345678889999997 8877544
No 242
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.11 E-value=0.047 Score=47.51 Aligned_cols=80 Identities=19% Similarity=0.191 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cc-eE--eCCCCCCchhHHHHHHhh-hCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG--MT-DF--INPDDEPNKSISELVKGI-THGM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg--a~-~v--~~~~~~~~~~~~~~i~~~-~~g~ 221 (335)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ..+. .. .. .|-.+ +..+...+++. ....
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4678999987 9999999999988899 899999998776554 2222 11 12 23222 23333333322 1112
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
++|++|.+.|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 243
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.10 E-value=0.046 Score=51.33 Aligned_cols=91 Identities=23% Similarity=0.285 Sum_probs=58.4
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHh--cC--Cc-eEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 154 VAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKA--FG--MT-DFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 154 VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~--lg--a~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
|+|+|+|.+|..+++++...+-. +|++.+++.++.+.+.+ .+ .. ..+|..+ . +.+.++.. +.|+|+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~-~~l~~~~~--~~dvVi 72 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----P-ESLAELLR--GCDVVI 72 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----H-HHHHHHHT--TSSEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----H-HHHHHHHh--cCCEEE
Confidence 68899999999999999877643 89999999999777643 22 11 2344433 2 22555544 469999
Q ss_pred EcCCChHHHHHHHHhhccCCeEEEEE
Q 019822 228 ECTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 228 d~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
+|+|.......+-.++..+ -.+++.
T Consensus 73 n~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 73 NCAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp E-SSGGGHHHHHHHHHHHT--EEEES
T ss_pred ECCccchhHHHHHHHHHhC-CCeecc
Confidence 9998764445566667775 677773
No 244
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.044 Score=48.33 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+. + .+.. .+ .|..+ .....+.+.+... -
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 8999999999988999 9999999887765442 2 2322 12 33333 1222222232211 1
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.++|++|++.|
T Consensus 86 ~~id~vi~~Ag 96 (263)
T PRK07814 86 GRLDIVVNNVG 96 (263)
T ss_pred CCCCEEEECCC
Confidence 26999999886
No 245
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.042 Score=48.06 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=50.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eEe--CCCCCCchhHHHHHHhhhC-CC
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFI--NPDDEPNKSISELVKGITH-GM 221 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g~ 221 (335)
++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.. ..+ |-.+ +....+.+.+... -.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 468999987 9999999999999999 9999998887665442 22221 222 3222 2333333333211 12
Q ss_pred CccEEEEcCC
Q 019822 222 GVDYCFECTG 231 (335)
Q Consensus 222 g~d~vid~~g 231 (335)
++|++|++.|
T Consensus 78 ~id~lI~~ag 87 (252)
T PRK07677 78 RIDALINNAA 87 (252)
T ss_pred CccEEEECCC
Confidence 6899999886
No 246
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.10 E-value=0.15 Score=43.42 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
.+++|||+|+|.+|..-++.+...|+ +|++++.... ..+.+.+.|--..+...- . ...+ .++++||-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~~----~-~~dl------~~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARCF----D-ADIL------EGAFLVIA 75 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCCC----C-HHHh------CCcEEEEE
Confidence 46799999999999999999999999 9999886543 233333334212222111 1 1111 26999999
Q ss_pred cCCChHHHHHHHHhhccCCeEEEEE
Q 019822 229 CTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
+++.+..-..+....... |..+-+
T Consensus 76 at~d~~ln~~i~~~a~~~-~ilvn~ 99 (205)
T TIGR01470 76 ATDDEELNRRVAHAARAR-GVPVNV 99 (205)
T ss_pred CCCCHHHHHHHHHHHHHc-CCEEEE
Confidence 999875444555555554 655543
No 247
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.044 Score=47.98 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce---EeCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~---v~~~~~~~~~~~~~~i~~~~--~ 219 (335)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +.+... ..|-.+ +....+.+.+.. -
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999987 9999999999999999 9999999887765542 223211 233332 123333333221 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|+++++.|.
T Consensus 85 g-~id~lv~~ag~ 96 (253)
T PRK05867 85 G-GIDIAVCNAGI 96 (253)
T ss_pred C-CCCEEEECCCC
Confidence 3 68999998763
No 248
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.09 E-value=0.059 Score=46.91 Aligned_cols=80 Identities=23% Similarity=0.290 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCc-eE--eCCCCCCchhHHHHHHhhhC-CCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMT-DF--INPDDEPNKSISELVKGITH-GMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g 222 (335)
.++++||+|+ |.+|.+++..+...|+ +|+.+++++.. .+.+++++.. .. .|-.+ ..+....+++... ..+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999987 9999999999998999 99999886521 2333444422 12 23332 2333333333221 126
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|+++++.|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 8999998764
No 249
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.09 E-value=0.043 Score=50.12 Aligned_cols=80 Identities=19% Similarity=0.225 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h----cCCce----EeCCCCCCchhHHHHHHhhhC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A----FGMTD----FINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~----lga~~----v~~~~~~~~~~~~~~i~~~~~ 219 (335)
.++++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+. + .+... ..|-.+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 4789999997 9999998888888899 9999999998876542 2 22111 223221 01234445555445
Q ss_pred CCCccEEEEcCC
Q 019822 220 GMGVDYCFECTG 231 (335)
Q Consensus 220 g~g~d~vid~~g 231 (335)
+..+|+++++.|
T Consensus 130 ~~didilVnnAG 141 (320)
T PLN02780 130 GLDVGVLINNVG 141 (320)
T ss_pred CCCccEEEEecC
Confidence 445779998876
No 250
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.07 E-value=0.046 Score=48.14 Aligned_cols=79 Identities=23% Similarity=0.134 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc-eE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMT-DF--INPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
+++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+++. +.. .. .|-.+ .....+.+++... -.++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4689999987 9999999999998999 999999988776666442 321 11 23322 1223333333221 1268
Q ss_pred cEEEEcCC
Q 019822 224 DYCFECTG 231 (335)
Q Consensus 224 d~vid~~g 231 (335)
|++|++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999876
No 251
>PRK01581 speE spermidine synthase; Validated
Probab=96.07 E-value=0.088 Score=48.48 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-----------CceEeCCCCCCchhHHHHHHh
Q 019822 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-----------MTDFINPDDEPNKSISELVKG 216 (335)
Q Consensus 148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-----------a~~v~~~~~~~~~~~~~~i~~ 216 (335)
....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. ...+ ...- .|..+.+++
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi---~Da~~fL~~ 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHV---CDAKEFLSS 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEE---CcHHHHHHh
Confidence 4556799999976 3667788888766569999999999888888531 0111 0000 223344443
Q ss_pred hhCCCCccEEE-EcCCC----------hHHHHHHHHhhccCCeEEEEEcc
Q 019822 217 ITHGMGVDYCF-ECTGV----------PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 217 ~~~g~g~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
. ...+|+|| |.... .+.+..+.+.|+++ |.++.-..
T Consensus 223 ~--~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 223 P--SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred c--CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 2 23799998 54221 23567888999998 99877643
No 252
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.05 E-value=0.064 Score=48.25 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
.++++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3567899999999999998888889996799999885
No 253
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.049 Score=47.86 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=51.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cC-C-ce--EeCCCCCCchhHHHHHHhhhC--CCCc
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FG-M-TD--FINPDDEPNKSISELVKGITH--GMGV 223 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg-a-~~--v~~~~~~~~~~~~~~i~~~~~--g~g~ 223 (335)
+++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ ++ . .. ..|-.+ ..+..+.+++... ..++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47899987 9999999998888999 99999998887766533 32 1 11 234333 1333333333211 2278
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999998874
No 254
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.046 Score=47.81 Aligned_cols=80 Identities=18% Similarity=0.176 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--E--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v--~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.++++++..+...++.... . .|-.+ .......+.+... -.++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 5679999987 9999999999988999 8999998877655554432211 2 23222 1223332322211 1268
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|++|.+.|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999998874
No 255
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.02 E-value=0.099 Score=43.96 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=50.6
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c----CCce-EeCCCCCCchhHHHHHHhhhCCC
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F----GMTD-FINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l----ga~~-v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
.++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ . +.+.+.. +
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~-~~~~~~~--~ 96 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-----D-AARAAAI--K 96 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-----H-HHHHHHH--h
Confidence 36789999986 9999998888888898 99999998887665432 2 2221 122222 1 1222222 2
Q ss_pred CccEEEEcCCCh
Q 019822 222 GVDYCFECTGVP 233 (335)
Q Consensus 222 g~d~vid~~g~~ 233 (335)
++|+||.+++..
T Consensus 97 ~~diVi~at~~g 108 (194)
T cd01078 97 GADVVFAAGAAG 108 (194)
T ss_pred cCCEEEECCCCC
Confidence 689999988765
No 256
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.01 E-value=0.058 Score=46.92 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+... ..|-.+ .....+.+++... .
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999988999 899999988765543 2334321 123222 1223333333221 1
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.++|.+|++.|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 26899999887
No 257
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.01 E-value=0.087 Score=46.66 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
.+.+|+|+|.|++|..++..+...|..+++.++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56789999999999999999999998899999855
No 258
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.99 E-value=0.034 Score=53.61 Aligned_cols=77 Identities=26% Similarity=0.405 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHhcCCceEeCCCCCCch
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP---------------------WKKEKGKAFGMTDFINPDDEPNK 208 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~---------------------~~~~~~~~lga~~v~~~~~~~~~ 208 (335)
.+++|+|+|+|+.|+.++..++..|. +|++++..+ ...++++++|.+..++... ..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--GR 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--CC
Confidence 56899999999999999999999999 898887653 2356678888765554432 01
Q ss_pred hHHHHHHhhhCCCCccEEEEcCCCh
Q 019822 209 SISELVKGITHGMGVDYCFECTGVP 233 (335)
Q Consensus 209 ~~~~~i~~~~~g~g~d~vid~~g~~ 233 (335)
+. .+.++. .++|.||.++|..
T Consensus 217 ~~--~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH--hcCCEEEEEeCCC
Confidence 11 112222 2699999999975
No 259
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.98 E-value=0.063 Score=46.12 Aligned_cols=104 Identities=20% Similarity=0.210 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh------hH--H---------------HHHhcCC-ceEeCCCCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW------KK--E---------------KGKAFGM-TDFINPDDE 205 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~------~~--~---------------~~~~lga-~~v~~~~~~ 205 (335)
+.+.|+|+|.|+||..++..+...|+.++..++-+.= |+ + ..++... .+|...++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 5688999999999999999999999999988884431 11 1 1111221 12222222
Q ss_pred CchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH-hhccCCeEEEEEccCCC
Q 019822 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 206 ~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~g~~~~ 258 (335)
.-..+.+.++... ++|+|+||..+-..=-.++. +.... =.++..+...+
T Consensus 108 --f~t~en~~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~ 157 (263)
T COG1179 108 --FITEENLEDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG 157 (263)
T ss_pred --hhCHhHHHHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence 1124455566665 99999999986533223333 44443 45565554433
No 260
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.96 E-value=0.039 Score=43.52 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=29.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
..+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999899998844
No 261
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.95 E-value=0.057 Score=47.53 Aligned_cols=80 Identities=16% Similarity=0.252 Sum_probs=48.6
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHH---HH-HhcCCceEeCCCCCCchhHHHHHHhhhC--C
Q 019822 150 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKE---KG-KAFGMTDFINPDDEPNKSISELVKGITH--G 220 (335)
Q Consensus 150 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~V~~~~~~~~~~~---~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~--g 220 (335)
.++++||+|++ ++|.++++.+...|+ +|+.++++++..+ .+ ++++....+.-+-.+..+..+.+.+... |
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 46889999863 899999999988999 8988888754322 22 3344322222221111333333333221 3
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.+|+++++.|
T Consensus 88 -~ld~lv~nAg 97 (258)
T PRK07533 88 -RLDFLLHSIA 97 (258)
T ss_pred -CCCEEEEcCc
Confidence 6899998876
No 262
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.055 Score=47.71 Aligned_cols=79 Identities=19% Similarity=0.267 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCce----EeCCCCCCchhHHHHHHhhh-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTD----FINPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~~----v~~~~~~~~~~~~~~i~~~~- 218 (335)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. + .+... ..|-.+ .....+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4688999987 9999999999999999 9999999887765432 1 11111 123332 122323333221
Q ss_pred -CCCCccEEEEcCCC
Q 019822 219 -HGMGVDYCFECTGV 232 (335)
Q Consensus 219 -~g~g~d~vid~~g~ 232 (335)
-+ ++|+++++.|.
T Consensus 84 ~~g-~id~li~~Ag~ 97 (265)
T PRK07062 84 RFG-GVDMLVNNAGQ 97 (265)
T ss_pred hcC-CCCEEEECCCC
Confidence 13 68999998873
No 263
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.93 E-value=0.067 Score=47.01 Aligned_cols=76 Identities=24% Similarity=0.308 Sum_probs=49.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceEe--CCCCCCchhHHHHHHhhh--CCCCc
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI--NPDDEPNKSISELVKGIT--HGMGV 223 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v~--~~~~~~~~~~~~~i~~~~--~g~g~ 223 (335)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.+..+.+ |-.+ ..+..+.+++.. .+ ++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g-~i 77 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLG-GI 77 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcC-CC
Confidence 6899987 9999999999988999 999999988765543 222322222 3222 123333333321 13 68
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|++|++.|.
T Consensus 78 d~li~naG~ 86 (259)
T PRK08340 78 DALVWNAGN 86 (259)
T ss_pred CEEEECCCC
Confidence 999998874
No 264
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.19 Score=44.47 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=48.7
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce----EeCCCCCCchhHHHHHHhhh-CCCC
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD----FINPDDEPNKSISELVKGIT-HGMG 222 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~----v~~~~~~~~~~~~~~i~~~~-~g~g 222 (335)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|-.+ .......+.+.. ...+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899987 9999999999988999 899999887765443 2334321 234333 122222222221 1126
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 265
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.90 E-value=0.063 Score=47.35 Aligned_cols=79 Identities=19% Similarity=0.299 Sum_probs=48.4
Q ss_pred CCCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHHHHHHhhhC
Q 019822 149 EKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELVKGITH 219 (335)
Q Consensus 149 ~~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i~~~~~ 219 (335)
-.++.+||+|+ + ++|.++++.+...|+ +|+.+++++...+.+ ++.|.... .|-.+ +.+..+.+++...
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHH
Confidence 35688999987 4 799999988888999 898888764222222 23343222 34332 2333333333221
Q ss_pred --CCCccEEEEcCC
Q 019822 220 --GMGVDYCFECTG 231 (335)
Q Consensus 220 --g~g~d~vid~~g 231 (335)
| .+|+++++.|
T Consensus 83 ~~g-~iDilVnnag 95 (260)
T PRK06603 83 KWG-SFDFLLHGMA 95 (260)
T ss_pred HcC-CccEEEEccc
Confidence 3 6999998776
No 266
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.90 E-value=0.073 Score=47.49 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=66.6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCce--EeCCCCC-CchhHHHHHHhhhCCCCccEEE
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTD--FINPDDE-PNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~--v~~~~~~-~~~~~~~~i~~~~~g~g~d~vi 227 (335)
++|||+|+|. |..+-.++++...+++++++.+++-.++++++ +... -.|++-+ ...|-.+.+++... ++|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~--~fDvIi 154 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE--KFDVII 154 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC--cCCEEE
Confidence 5999998654 66777888888877999999999988888763 2110 0011110 01334455555433 799997
Q ss_pred -EcCCC---------hHHHHHHHHhhccCCeEEEEE
Q 019822 228 -ECTGV---------PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 228 -d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 253 (335)
|++.. ...++.+-++|+++ |.++.-
T Consensus 155 ~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 155 VDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred EcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 66644 45778999999998 988877
No 267
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.075 Score=46.66 Aligned_cols=78 Identities=12% Similarity=0.062 Sum_probs=50.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCC--c-eE--eCCCCCCchhHHHHHHhhhCC-CC
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGM--T-DF--INPDDEPNKSISELVKGITHG-MG 222 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga--~-~v--~~~~~~~~~~~~~~i~~~~~g-~g 222 (335)
..++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+.+ +.. . .. .|-.+ .....+.+++.... ..
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 468999987 9999999999888899 99999998877665432 221 1 11 23332 23333333332211 15
Q ss_pred ccEEEEcCC
Q 019822 223 VDYCFECTG 231 (335)
Q Consensus 223 ~d~vid~~g 231 (335)
+|+++++.|
T Consensus 79 id~lv~~ag 87 (257)
T PRK07024 79 PDVVIANAG 87 (257)
T ss_pred CCEEEECCC
Confidence 899999876
No 268
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.075 Score=45.93 Aligned_cols=79 Identities=16% Similarity=0.085 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC--
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-- 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 219 (335)
+++++||+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+ ++.+.+. . .|-.+ .....+.+.+...
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 8999999988888999 999999988876544 2334321 1 23222 2333333333221
Q ss_pred CCCccEEEEcCC
Q 019822 220 GMGVDYCFECTG 231 (335)
Q Consensus 220 g~g~d~vid~~g 231 (335)
+..+|++|++.|
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 226999999886
No 269
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.86 E-value=0.039 Score=45.37 Aligned_cols=93 Identities=18% Similarity=0.297 Sum_probs=61.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
+|.|+|+ |-+|...++=|+..|. +|+++.++++|....+..-+ ..|++... .++.+ .|+|+||++
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~-----~a~~l------~g~DaVIsA 69 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS-----LASDL------AGHDAVISA 69 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh-----hHhhh------cCCceEEEe
Confidence 5788987 9999999999999999 99999999998866432211 11332221 22222 279999998
Q ss_pred CCCh--H-------HHHHHHHhhccC-CeEEEEEccCC
Q 019822 230 TGVP--S-------LLSEALETTKVG-KGKVIVIGVGV 257 (335)
Q Consensus 230 ~g~~--~-------~~~~~~~~l~~~-~G~~v~~g~~~ 257 (335)
.+.. + ..+.++..++.- .-|+..+|...
T Consensus 70 ~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 70 FGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred ccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 8754 1 123355556552 24788887554
No 270
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.86 E-value=0.15 Score=41.35 Aligned_cols=83 Identities=12% Similarity=0.158 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
-.+.+|||+|+|.+|..-++.+...|+ +|.+++ ++..+.+++++.... ..+. +.+. +=.++|+|+-
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~-----~~~~-----dl~~a~lVia 76 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT-----FSND-----DIKDAHLIYA 76 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc-----cChh-----cCCCceEEEE
Confidence 357899999999999999998888999 888885 333344444542221 1221 1100 1136899999
Q ss_pred cCCChHHHHHHHHhhccC
Q 019822 229 CTGVPSLLSEALETTKVG 246 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~ 246 (335)
+++..+ ++..+...+..
T Consensus 77 aT~d~e-~N~~i~~~a~~ 93 (157)
T PRK06719 77 ATNQHA-VNMMVKQAAHD 93 (157)
T ss_pred CCCCHH-HHHHHHHHHHH
Confidence 998874 56655555553
No 271
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.073 Score=46.66 Aligned_cols=78 Identities=18% Similarity=0.266 Sum_probs=49.3
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eE--eCCCCCCchhHHHHHHhhh--CC
Q 019822 150 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DF--INPDDEPNKSISELVKGIT--HG 220 (335)
Q Consensus 150 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~~~~~i~~~~--~g 220 (335)
.++++||+|++ ++|.++++.+...|+ +|+.++++++..+.++++... .. .|-.+ +.+..+.+++.. .+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 57889999863 899999999988999 999998875444444444211 12 23222 123333333322 13
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.+|+++++.|
T Consensus 83 -~iD~lv~nAg 92 (252)
T PRK06079 83 -KIDGIVHAIA 92 (252)
T ss_pred -CCCEEEEccc
Confidence 6999998876
No 272
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.068 Score=46.75 Aligned_cols=80 Identities=20% Similarity=0.179 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ ++.+... . .|-.+ +....+.+++... -
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 9999999999988999 999999988776554 2233221 2 23332 1222223332211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|++|++.|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 268999998873
No 273
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.79 E-value=0.044 Score=46.22 Aligned_cols=101 Identities=17% Similarity=0.282 Sum_probs=61.5
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhh
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
+.+.....++.+||-+|+|. |..+..+++ .|. +|++++.+++-.+.+++. +.. +.... .+... . .+
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc
Confidence 34445555677899999864 777777776 477 999999998877765432 322 11110 11110 0 11
Q ss_pred hCCCCccEEEEcCC-----C---hHHHHHHHHhhccCCeEEEEEcc
Q 019822 218 THGMGVDYCFECTG-----V---PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 218 ~~g~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
.+ .+|+|+.+.. . ...++.+.+.|+++ |.++.+..
T Consensus 92 -~~-~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~~ 134 (195)
T TIGR00477 92 -NE-DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVAA 134 (195)
T ss_pred -cC-CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEEe
Confidence 23 6999986422 1 24677888899998 98655543
No 274
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.78 E-value=0.072 Score=49.01 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998999999764
No 275
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.77 E-value=0.09 Score=45.54 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|+|+|+|++|..++..+...|..+++.+|.+.
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 357899999999999999999999998998887543
No 276
>PRK05717 oxidoreductase; Validated
Probab=95.76 E-value=0.079 Score=46.43 Aligned_cols=80 Identities=19% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-e--EeCCCCCCchhHHHHHHhhhCC-CCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-D--FINPDDEPNKSISELVKGITHG-MGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~--v~~~~~~~~~~~~~~i~~~~~g-~g~ 223 (335)
.++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++.. . ..|-.+ .......+.+.... .++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999999988999 999998877655443 444422 1 123332 12232223332211 158
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998773
No 277
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.081 Score=46.71 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=51.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
.+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .+.+.. .. +|..+ ..+....+++...
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADE 83 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence 35789999987 9999999999999999 999999887765433 222322 11 23332 1333333333221
Q ss_pred CCCccEEEEcCC
Q 019822 220 GMGVDYCFECTG 231 (335)
Q Consensus 220 g~g~d~vid~~g 231 (335)
-.++|++|.+.|
T Consensus 84 ~~~iD~vi~~ag 95 (264)
T PRK07576 84 FGPIDVLVSGAA 95 (264)
T ss_pred cCCCCEEEECCC
Confidence 126899998775
No 278
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.75 E-value=0.058 Score=54.16 Aligned_cols=77 Identities=26% Similarity=0.359 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceEeCCCCCCch
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPNK 208 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 208 (335)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. +.++++++|.+..++.......
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 47899999999999999999999999 8999886652 4566678887765554320001
Q ss_pred hHHHHHHhhhCCCCccEEEEcCCCh
Q 019822 209 SISELVKGITHGMGVDYCFECTGVP 233 (335)
Q Consensus 209 ~~~~~i~~~~~g~g~d~vid~~g~~ 233 (335)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH--hcCCEEEEeCCCC
Confidence 12 2222 2699999999864
No 279
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.11 Score=45.67 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCc-eE--eCCCCCCchhHHHHHHhhhCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMT-DF--INPDDEPNKSISELVKGITHG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~-~v--~~~~~~~~~~~~~~i~~~~~g 220 (335)
.++++||+|+ +++|..+++.+...|+ +|+++++++++.+.+. + .+.. .. .|-.+ ..+....+++. +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh--C
Confidence 4689999987 9999999999988999 9999999887665532 1 1221 22 23222 12333333322 3
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.+|++|++.|.
T Consensus 81 -~id~lv~~ag~ 91 (259)
T PRK06125 81 -DIDILVNNAGA 91 (259)
T ss_pred -CCCEEEECCCC
Confidence 69999998874
No 280
>PRK06128 oxidoreductase; Provisional
Probab=95.72 E-value=0.12 Score=46.68 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hH----HHHHhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KK----EKGKAFGMTD-F--INPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~----~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~- 218 (335)
.++++||+|+ |.+|.+++..+...|+ +|+.+.++.+ +. +.+++.+... . .|-.+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 5689999987 9999999999988999 8887765432 11 2233344322 1 23322 122223333221
Q ss_pred -CCCCccEEEEcCCC
Q 019822 219 -HGMGVDYCFECTGV 232 (335)
Q Consensus 219 -~g~g~d~vid~~g~ 232 (335)
-+ ++|++|++.|.
T Consensus 131 ~~g-~iD~lV~nAg~ 144 (300)
T PRK06128 131 ELG-GLDILVNIAGK 144 (300)
T ss_pred HhC-CCCEEEECCcc
Confidence 12 69999998873
No 281
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.72 E-value=0.042 Score=46.57 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999889999977
No 282
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.71 E-value=0.16 Score=39.66 Aligned_cols=88 Identities=23% Similarity=0.311 Sum_probs=54.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCCh--hhH-HHHHhcCCceEeCCCCCCchhHHHHHH------------
Q 019822 154 VAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNP--WKK-EKGKAFGMTDFINPDDEPNKSISELVK------------ 215 (335)
Q Consensus 154 VlI~G~-g~vG~~ai~la~~~G--~~~V~~~~~~~--~~~-~~~~~lga~~v~~~~~~~~~~~~~~i~------------ 215 (335)
|.|+|+ |++|..+.++.+... + +|++..-.. +++ +.+++|.+..++-.++ ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence 567898 999999999999887 6 776665333 222 2346777777665543 2222222
Q ss_pred --------hhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822 216 --------GITHGMGVDYCFECTGVPSLLSEALETTKVG 246 (335)
Q Consensus 216 --------~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~ 246 (335)
++.....+|+|+.++.+-..+.-.+.++..+
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 2222246888888777666777888888774
No 283
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.70 E-value=0.089 Score=46.81 Aligned_cols=92 Identities=16% Similarity=0.102 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---CceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MTDFINPDDEPNKSISELVKGITHGMGVD 224 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~~v~~~~~~~~~~~~~~i~~~~~g~g~d 224 (335)
.++++++|+|+|++|.+++..+...|+ +|+++++++++.+.+ +++. ........ +.. -..+|
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------------~~~-~~~~D 180 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD------------ELP-LHRVD 180 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh------------hhc-ccCcc
Confidence 457889999999999999988888898 999999988776554 3332 11121111 111 12689
Q ss_pred EEEEcCCCh--HHH---HHHHHhhccCCeEEEEEcc
Q 019822 225 YCFECTGVP--SLL---SEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 225 ~vid~~g~~--~~~---~~~~~~l~~~~G~~v~~g~ 255 (335)
+||+|++.. ... ......+.++ ..++++.-
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 999998753 111 1113446665 56666643
No 284
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.097 Score=45.35 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
..+++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. +.+.. .. .|-.+ .......+++... .
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4578999987 9999999999988999 9999999887665442 22221 12 23222 1333333333221 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|+++++.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 258999998874
No 285
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.69 E-value=0.22 Score=43.25 Aligned_cols=106 Identities=19% Similarity=0.207 Sum_probs=74.0
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhh-
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGI- 217 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~- 217 (335)
....+..+|.+||=+|+|+ |-.+..+++..|-.+|+++|.|++-++.+++- |... +..-. . ...++
T Consensus 44 i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~----dAe~LP 114 (238)
T COG2226 44 ISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---G----DAENLP 114 (238)
T ss_pred HHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---e----chhhCC
Confidence 3445566899999998774 89999999999866999999999988887542 2221 11000 1 11121
Q ss_pred hCCCCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEccCCC
Q 019822 218 THGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 218 ~~g~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
.....||+|.-+.|- +..+.++.+.|.|+ |+++.+.....
T Consensus 115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 233478998776652 35789999999998 99998877654
No 286
>PRK06194 hypothetical protein; Provisional
Probab=95.68 E-value=0.048 Score=48.67 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce-Ee--CCCCCCchhHHHHHHhhh-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTD-FI--NPDDEPNKSISELVKGIT-HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~~-v~--~~~~~~~~~~~~~i~~~~-~g 220 (335)
.++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +++ +... ++ |-.+ ..++.+.+.+.. ..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3578999987 9999999999888999 999999887665443 222 3221 12 3222 122322222221 11
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|++|++.|.
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 268999998874
No 287
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.67 E-value=0.27 Score=41.74 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
.+.+|||+|+|.+|...+..+...|+ +|+++++... ....+.+.+.-. +.... .. ...+ .++|+||-
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~---~~-~~~l------~~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE---FE-PSDI------VDAFLVIA 76 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC---CC-hhhc------CCceEEEE
Confidence 57899999999999999988888998 8988875432 222222222111 11111 00 0011 26899999
Q ss_pred cCCChHHHHHHHHhhccCCeEEEEE
Q 019822 229 CTGVPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
+++.+. ++..+...+.. +.++-+
T Consensus 77 aT~d~e-lN~~i~~~a~~-~~lvn~ 99 (202)
T PRK06718 77 ATNDPR-VNEQVKEDLPE-NALFNV 99 (202)
T ss_pred cCCCHH-HHHHHHHHHHh-CCcEEE
Confidence 999884 45555555554 545444
No 288
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.67 E-value=0.28 Score=41.31 Aligned_cols=104 Identities=18% Similarity=0.280 Sum_probs=64.0
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVK 215 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~ 215 (335)
+.......++++||=+|+|. |..++.+++.....+|++++.+++..+.++ +++... ++..+ ..+.+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d------~~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGS------APECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECc------hHHHHh
Confidence 34556677889998888753 556666776543239999999998877664 355432 23222 222222
Q ss_pred hhhCCCCccEE-EEcCCC-hHHHHHHHHhhccCCeEEEEEcc
Q 019822 216 GITHGMGVDYC-FECTGV-PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 216 ~~~~g~g~d~v-id~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
.+.. .+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus 105 ~~~~--~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 105 QLAP--APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred hCCC--CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 2221 24444 443322 35678899999997 99888754
No 289
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.66 E-value=0.099 Score=46.60 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=64.5
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822 150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~---~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~-- 218 (335)
.++++||+|+ +++|+++++.+...|+ +|+.++++++ +.+.+ ++++.... .|-.+ .....+.+++..
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4688999986 4899999999888999 9998888753 22222 34453222 34333 133333333332
Q ss_pred CCCCccEEEEcCCCh--------------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822 219 HGMGVDYCFECTGVP--------------S---------------LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 219 ~g~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
.+ ++|++|++.|.. + ..+.+++.+..+ |+++.++...+
T Consensus 81 ~g-~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~ 147 (274)
T PRK08415 81 LG-KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG 147 (274)
T ss_pred cC-CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence 13 689999988731 0 123445566676 89988876543
No 290
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.66 E-value=0.1 Score=45.03 Aligned_cols=79 Identities=11% Similarity=0.146 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCceE-eCCCCCCchhHHHHHHhhhCC-CCccEE
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDF-INPDDEPNKSISELVKGITHG-MGVDYC 226 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g-~g~d~v 226 (335)
++++||+|+ +++|.++++.+...|+ +|+.+++++++. +.+++.+...+ .|-.+ .....+.+.+.... .++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999987 9999999999988999 999998876543 33444553221 23222 12333333332211 158999
Q ss_pred EEcCCC
Q 019822 227 FECTGV 232 (335)
Q Consensus 227 id~~g~ 232 (335)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998763
No 291
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.66 E-value=0.095 Score=45.98 Aligned_cols=80 Identities=20% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+. +.+.. .. .|-.+ ...+...+.++.. -
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5689999987 9999999999988999 9999999887765542 22321 12 23332 1223222222211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|.+|.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 268999998763
No 292
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.062 Score=46.55 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=35.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
++++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHH
Confidence 4678999987 9999999999988999 999999988766543
No 293
>PLN00203 glutamyl-tRNA reductase
Probab=95.63 E-value=0.11 Score=50.66 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
.+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+ .+++ ... +.... .+.+... +.|+|
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---------dl~~al~--~aDVV 333 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---------EMLACAA--EADVV 333 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---------hHHHHHh--cCCEE
Confidence 368999999999999999999999987899999998887665 4453 221 11111 1222222 68999
Q ss_pred EEcCCCh
Q 019822 227 FECTGVP 233 (335)
Q Consensus 227 id~~g~~ 233 (335)
|.|++.+
T Consensus 334 IsAT~s~ 340 (519)
T PLN00203 334 FTSTSSE 340 (519)
T ss_pred EEccCCC
Confidence 9998764
No 294
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.61 E-value=0.16 Score=44.70 Aligned_cols=99 Identities=22% Similarity=0.242 Sum_probs=66.3
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCC
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
.......++++||=+|+|. |..+..+++..+..+|++++.+++..+.+++.-. ..++..+ . .++....
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~----~~~~~~~ 92 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------I----ASWQPPQ 92 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------h----hccCCCC
Confidence 3445667889999999864 7777888877643499999999988888765422 1122111 1 1112223
Q ss_pred CccEEEEcCC------ChHHHHHHHHhhccCCeEEEEE
Q 019822 222 GVDYCFECTG------VPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 222 g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
.+|+|+.... ....+..+.+.|+++ |+++..
T Consensus 93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 7999985433 124678889999997 998775
No 295
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.069 Score=46.78 Aligned_cols=73 Identities=19% Similarity=0.347 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
.++++||+|+ |++|.++++.+...|+ +|+++++++. +.+... .+.... .|-.+ . +.+.+..+ ++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~---~---~~~~~~~~--~iDi 82 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK---E---ESLDKQLA--SLDV 82 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC---H---HHHHHhcC--CCCE
Confidence 3578999987 9999999999988999 9999988762 222211 111122 23332 1 22333332 5999
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
+|++.|.
T Consensus 83 lVnnAG~ 89 (245)
T PRK12367 83 LILNHGI 89 (245)
T ss_pred EEECCcc
Confidence 9998874
No 296
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.60 E-value=0.11 Score=45.10 Aligned_cols=36 Identities=36% Similarity=0.473 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|+|+|.|++|..++..+...|..+++.+|.+.
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 346899999999999999999999999999998654
No 297
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.08 Score=46.42 Aligned_cols=81 Identities=21% Similarity=0.234 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---EeCCCCCCchhHHHHHHhhh--
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTD---FINPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lga~~---v~~~~~~~~~~~~~~i~~~~-- 218 (335)
.++++++|+|+ |.+|..+++.+...|++.|++++++.++.+. +++.+... ..|..+ +..+.+.+....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35688999987 9999999999999999349999988765542 23344322 223332 122333232221
Q ss_pred CCCCccEEEEcCCC
Q 019822 219 HGMGVDYCFECTGV 232 (335)
Q Consensus 219 ~g~g~d~vid~~g~ 232 (335)
-+ ++|.+|++.+.
T Consensus 82 ~g-~id~li~~ag~ 94 (260)
T PRK06198 82 FG-RLDALVNAAGL 94 (260)
T ss_pred hC-CCCEEEECCCc
Confidence 13 69999998874
No 298
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.1 Score=44.89 Aligned_cols=74 Identities=19% Similarity=0.180 Sum_probs=49.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
+++|+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+ ..+..+.++++. + .+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~-~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-H-HLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-h-cCcEEEEC
Confidence 4889987 9999999999988999 999999988877654 44444322 34333 122333333332 2 68999987
Q ss_pred CC
Q 019822 230 TG 231 (335)
Q Consensus 230 ~g 231 (335)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 64
No 299
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.60 E-value=0.095 Score=45.96 Aligned_cols=40 Identities=23% Similarity=0.187 Sum_probs=33.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~ 42 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANV 42 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 468999987 9999999999988999 999999887765443
No 300
>PRK08643 acetoin reductase; Validated
Probab=95.59 E-value=0.1 Score=45.63 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=50.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce-E--eCCCCCCchhHHHHHHhhh--CC
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGIT--HG 220 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g 220 (335)
++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. +.+... . .|-.+ +....+.+.+.. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 568899987 9999999999998999 9999998877654432 223221 1 23332 122333333221 13
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
++|++|.+.|.
T Consensus 79 -~id~vi~~ag~ 89 (256)
T PRK08643 79 -DLNVVVNNAGV 89 (256)
T ss_pred -CCCEEEECCCC
Confidence 68999998864
No 301
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.095 Score=45.10 Aligned_cols=80 Identities=19% Similarity=0.158 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCceE-eCCCCCCchhHHHHHHhhhC-CCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDF-INPDDEPNKSISELVKGITH-GMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lga~~v-~~~~~~~~~~~~~~i~~~~~-g~g 222 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++... ++..+...+ .|-.+ ..+....+++... -.+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4689999987 9999999999988899 89999987765332 222333221 22222 1222222222211 116
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|+|+++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999988763
No 302
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.57 E-value=0.098 Score=47.63 Aligned_cols=95 Identities=20% Similarity=0.169 Sum_probs=60.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT 230 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~~ 230 (335)
+|||+|+ |-+|..++..+...|. +|.+++++.++...+...+...+. |..+ . ..+.+... ++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~--g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK--GVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC--CCCEEEECC
Confidence 6899997 9999999999988999 999999887766555555654332 2222 2 22333333 589999986
Q ss_pred CChH------------HHHHHHHhhccC-CeEEEEEccC
Q 019822 231 GVPS------------LLSEALETTKVG-KGKVIVIGVG 256 (335)
Q Consensus 231 g~~~------------~~~~~~~~l~~~-~G~~v~~g~~ 256 (335)
+... ....+++..... -.+++.++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 5320 112344544443 0378887764
No 303
>PLN02476 O-methyltransferase
Probab=95.55 E-value=0.12 Score=45.91 Aligned_cols=108 Identities=15% Similarity=0.243 Sum_probs=69.3
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhh
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGI 217 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~ 217 (335)
....+..+.++||=+|.+ +|..++.+|+.++. .+|+.++.+++..+.+ ++.|..+-+.-.. .+..+.+.++
T Consensus 111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l 186 (278)
T PLN02476 111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSM 186 (278)
T ss_pred HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHH
Confidence 344566778999999974 37777788887642 2799999999887766 4456432122111 3344444443
Q ss_pred h-C--CCCccEEE-EcCC--ChHHHHHHHHhhccCCeEEEEEcc
Q 019822 218 T-H--GMGVDYCF-ECTG--VPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 218 ~-~--g~g~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
. . ...||.|| |+-- ....++.+++.++++ |.++.=..
T Consensus 187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv 229 (278)
T PLN02476 187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV 229 (278)
T ss_pred HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence 2 1 23799997 5543 245678889999997 88765443
No 304
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.55 E-value=0.2 Score=44.06 Aligned_cols=98 Identities=19% Similarity=0.172 Sum_probs=68.0
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG 220 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g 220 (335)
+.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+...+. .+. .++...
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~----~~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDV----RDWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cCh----hhCCCC
Confidence 34556677889999999875 77777888765 55 999999999988888776543221 111 122222
Q ss_pred CCccEEEEcCC-----C-hHHHHHHHHhhccCCeEEEEE
Q 019822 221 MGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 221 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 253 (335)
..||+|+.... . ...+..+.+.|+++ |+++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 37999986432 2 34677888999998 998765
No 305
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.098 Score=45.85 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCc-eE--eCCCCCCchhHHHHHHhhhC-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMT-DF--INPDDEPNKSISELVKGITH-GM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~ 221 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+..++ .+.. .. .|..+ +......+.+... ..
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 4678999987 9999999988888999 88888888876644333 3322 12 23322 1223333333221 12
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 68999999873
No 306
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.54 E-value=0.13 Score=46.56 Aligned_cols=105 Identities=10% Similarity=0.071 Sum_probs=69.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHH-HhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKG-KAFGMT--DFINPDDEPNKSISELVKGITHGMGVD 224 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d 224 (335)
....+++|+|+|..|.+.+..+.. .+.++|.+..+++++.+.+ +++... .+. .. +..+.+. ++|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~-----~~~~av~------~aD 190 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PL-----DGEAIPE------AVD 190 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-EC-----CHHHHhh------cCC
Confidence 456789999999999998888864 6877999999998876654 444211 111 11 2222231 689
Q ss_pred EEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHH
Q 019822 225 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 268 (335)
Q Consensus 225 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 268 (335)
+|+.|++++..+-..+ ++++ -++..+|.......+++..-+
T Consensus 191 iVitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p~~~El~~~~~ 231 (304)
T PRK07340 191 LVVTATTSRTPVYPEA--ARAG-RLVVAVGAFTPDMAELAPRTV 231 (304)
T ss_pred EEEEccCCCCceeCcc--CCCC-CEEEecCCCCCCcccCCHHHH
Confidence 9999887653322223 6786 789999977655556664433
No 307
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.066 Score=46.78 Aligned_cols=79 Identities=23% Similarity=0.352 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|-.+ ..+....+.+.. .
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4689999987 9999999998888899 899999988765433 333422 12 23222 122222222221 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|++|++.|.
T Consensus 83 g-~id~li~~ag~ 94 (253)
T PRK06172 83 G-RLDYAFNNAGI 94 (253)
T ss_pred C-CCCEEEECCCC
Confidence 3 68999998774
No 308
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.53 E-value=0.078 Score=46.49 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|-.+ .....+.+.+.. .
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4688999987 9999999999999999 899999888665443 3334322 1 23222 122222222211 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|++|.+.|.
T Consensus 83 ~-~~d~vi~~ag~ 94 (262)
T PRK13394 83 G-SVDILVSNAGI 94 (262)
T ss_pred C-CCCEEEECCcc
Confidence 2 58999998864
No 309
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.51 E-value=0.43 Score=34.83 Aligned_cols=85 Identities=22% Similarity=0.329 Sum_probs=55.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC---CCEEEEE-cCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 153 SVAVLGLGTVGLGAVDGARMHG---AAKIIGI-DKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G---~~~V~~~-~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
+|.|+|+|.+|.+.+.-+...| . +|+.+ ++++++.+.+ ++++.. +.. .+..+.++ ..|+||
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~------~advvi 66 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQ------EADVVI 66 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHH------HTSEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhc------cCCEEE
Confidence 4778899999999999988888 6 88844 9999988876 556643 221 12233333 479999
Q ss_pred EcCCChHHHHHHHHhh---ccCCeEEEEE
Q 019822 228 ECTGVPSLLSEALETT---KVGKGKVIVI 253 (335)
Q Consensus 228 d~~g~~~~~~~~~~~l---~~~~G~~v~~ 253 (335)
-|+... .+...++.+ .++ ..++.+
T Consensus 67 lav~p~-~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 67 LAVKPQ-QLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp E-S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred EEECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence 999865 344444443 443 455554
No 310
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.11 Score=45.22 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc--CCc-eEe--CCCCCCchhHHHHHHhhh-CCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF--GMT-DFI--NPDDEPNKSISELVKGIT-HGM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l--ga~-~v~--~~~~~~~~~~~~~i~~~~-~g~ 221 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .++ +.. .++ |-.+ .....+.+.+.. .-.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888899 999999887765443 222 221 222 3222 122222222221 112
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
++|+++.+.+.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 311
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.51 E-value=0.14 Score=45.73 Aligned_cols=81 Identities=21% Similarity=0.225 Sum_probs=58.0
Q ss_pred HhcC-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822 144 KEAK-VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 144 ~~~~-~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
+..+ .-.|++|+|+|.|. +|..++.++...|+ +|+++.+.. .++.+.+ +
T Consensus 151 ~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~------~ 201 (283)
T PRK14192 151 KAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV------K 201 (283)
T ss_pred HHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh------c
Confidence 3444 35788999999976 99999999999999 888887421 1121112 2
Q ss_pred CccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
++|+||+++|.+..+. .+.+.++ ..+++++..
T Consensus 202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 6899999998775433 3558886 888888754
No 312
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.51 E-value=0.12 Score=48.43 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
.+.+|+|+|+|++|..++..+...|.+++..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999976
No 313
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.079 Score=46.36 Aligned_cols=80 Identities=20% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc---eEeCCCCCCchhHHHHHHhhh--
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMT---DFINPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lga~---~v~~~~~~~~~~~~~~i~~~~-- 218 (335)
.+++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+. + .+.. ...|-.+ ...+...+.+..
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALER 79 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHH
Confidence 35688999987 9999999999999999 9999999887665442 2 2321 1223322 123333333321
Q ss_pred CCCCccEEEEcCCC
Q 019822 219 HGMGVDYCFECTGV 232 (335)
Q Consensus 219 ~g~g~d~vid~~g~ 232 (335)
-+ ++|++|.+.|.
T Consensus 80 ~g-~~d~vi~~ag~ 92 (258)
T PRK07890 80 FG-RVDALVNNAFR 92 (258)
T ss_pred cC-CccEEEECCcc
Confidence 12 68999988763
No 314
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.50 E-value=0.13 Score=44.31 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
++.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+ ++.+... . .|-.+ +..+...+.+... -
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3568999987 9999999999988999 899999988765443 3334322 1 23332 1223333333211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
..+|.++.+.+.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 258999998764
No 315
>PLN02823 spermine synthase
Probab=95.50 E-value=0.12 Score=47.35 Aligned_cols=100 Identities=12% Similarity=0.053 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c-eEeC-CCC-CCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T-DFIN-PDD-EPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~-~v~~-~~~-~~~~~~~~~i~~~~~g~g~d~ 225 (335)
..++|||+|+|. |..+..+++..+..+|++++.+++-.+.++++-. . ..++ .+- .-..|-...+++ . .+.+|+
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~-~~~yDv 179 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-R-DEKFDV 179 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-C-CCCccE
Confidence 457899998764 6667778887776699999999998888876421 0 0110 000 000223334433 2 347999
Q ss_pred EE-EcCC-----------ChHHHH-HHHHhhccCCeEEEEE
Q 019822 226 CF-ECTG-----------VPSLLS-EALETTKVGKGKVIVI 253 (335)
Q Consensus 226 vi-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~ 253 (335)
|| |... +.+.++ .+.+.|+++ |.++.-
T Consensus 180 Ii~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 180 IIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 97 6432 122455 678899998 988754
No 316
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.50 E-value=0.044 Score=46.59 Aligned_cols=106 Identities=21% Similarity=0.258 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822 146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITHG 220 (335)
Q Consensus 146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~g 220 (335)
.+....++||-+|.+ +|+.++.+|+.+.- .+|+.++.+++..+.++ +.|...-+.... .+..+.+.++...
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHHHhc
Confidence 445567899999975 48889999987742 39999999998877764 445322112121 3344445544322
Q ss_pred ---CCccEEE-EcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822 221 ---MGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 221 ---~g~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
..||+|| |+--. ...++.+++.++++ |.++.=...
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l 157 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL 157 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence 2699997 76532 24567888999996 776665443
No 317
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.066 Score=47.07 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=49.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-CCC
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-GMG 222 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g~g 222 (335)
.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... + .|..+ ...+...+++... -.+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG 78 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 57999987 9999999999989999 999999987665433 2233321 1 23222 1223333333211 126
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999998763
No 318
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.48 E-value=0.4 Score=40.83 Aligned_cols=99 Identities=18% Similarity=0.228 Sum_probs=63.2
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHHh
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG 216 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~ 216 (335)
.......++.+||-+|+|. |..+..+++.. . +|++++.+++..+.++ +++... +...+ ... .
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~---~ 138 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD------GWK---G 138 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC------ccc---C
Confidence 4567788999999999864 55666666654 3 8999999987766553 344322 22111 111 1
Q ss_pred hhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 217 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 217 ~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
+.....||+|+...........+.+.|+++ |+++..-
T Consensus 139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 112237999986544444567888999997 9887653
No 319
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.47 E-value=0.14 Score=45.58 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=49.5
Q ss_pred CCCCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhh
Q 019822 148 VEKGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT 218 (335)
Q Consensus 148 ~~~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~ 218 (335)
.-.++++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+.+ ++++.... .|-.+ ..+..+.+++..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~ 83 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLE 83 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHH
Confidence 335688999986 5899999999988999 898887764 233333 34453222 23222 233333333322
Q ss_pred C-CCCccEEEEcCC
Q 019822 219 H-GMGVDYCFECTG 231 (335)
Q Consensus 219 ~-g~g~d~vid~~g 231 (335)
. -.++|+++++.|
T Consensus 84 ~~~g~iD~lv~nAG 97 (272)
T PRK08159 84 KKWGKLDFVVHAIG 97 (272)
T ss_pred HhcCCCcEEEECCc
Confidence 1 126899998876
No 320
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.47 E-value=0.09 Score=46.06 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCce---EeCCCCCCchhHHHHHHhhh--CCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD---FINPDDEPNKSISELVKGIT--HGM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~ 221 (335)
+++++||+|+ +++|.++++.+...|+ +|+.+++++.. .+.+++.+... ..|-.+ ..+..+.+++.. -+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g- 82 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMG- 82 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcC-
Confidence 5789999987 9999999999999999 89888765422 22334445321 133332 233333333321 13
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
++|+++++.|.
T Consensus 83 ~iD~lv~~ag~ 93 (251)
T PRK12481 83 HIDILINNAGI 93 (251)
T ss_pred CCCEEEECCCc
Confidence 68999998773
No 321
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.11 Score=45.66 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-eE--eCCCCCCchhHHHHHHhhhC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF-----GMT-DF--INPDDEPNKSISELVKGITH 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~~ 219 (335)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +++ +.. .. .|-.+ ..+....+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999987 9999999999999999 999999888766544 222 211 11 23322 1223333332211
Q ss_pred -CCCccEEEEcCCC
Q 019822 220 -GMGVDYCFECTGV 232 (335)
Q Consensus 220 -g~g~d~vid~~g~ 232 (335)
-.++|++|++.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 1268999998873
No 322
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.12 Score=44.78 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=48.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ce--EeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TD--FINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+. .. ..|-.+ ..+..+.+++. .. ..|.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~-~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PF-IPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-cc-CCCEEE
Confidence 57899987 9999998888888999 99999999888777654331 11 223332 13344444433 22 457766
Q ss_pred EcCC
Q 019822 228 ECTG 231 (335)
Q Consensus 228 d~~g 231 (335)
.+.|
T Consensus 77 ~~ag 80 (240)
T PRK06101 77 FNAG 80 (240)
T ss_pred EcCc
Confidence 5554
No 323
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.44 E-value=0.12 Score=47.20 Aligned_cols=79 Identities=23% Similarity=0.254 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---Cc-eE--eCCCCCCchhHHHHHHhhh-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MT-DF--INPDDEPNKSISELVKGIT-HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~-~v--~~~~~~~~~~~~~~i~~~~-~g 220 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++. .. .. .|-.+ .....+.+.++. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 9999999998888898 999999988776544 3332 11 11 23332 122222233321 12
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.++|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999877
No 324
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.44 E-value=0.1 Score=45.84 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---EeCCCCCCchhHHHHHHhhhC-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKGITH-GM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~~---v~~~~~~~~~~~~~~i~~~~~-g~ 221 (335)
+++++||+|+ |.+|.++++.+...|+ +|+.+++++...+..++ .+.+. ..|..+ ..+..+.+++... -.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999999988999 99999987543333332 33321 223332 1223333333221 12
Q ss_pred CccEEEEcCC
Q 019822 222 GVDYCFECTG 231 (335)
Q Consensus 222 g~d~vid~~g 231 (335)
++|+++++.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 6999999886
No 325
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.43 E-value=0.1 Score=45.55 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
.+.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 347899999999999999999999998999888554
No 326
>PRK09186 flagellin modification protein A; Provisional
Probab=95.43 E-value=0.13 Score=44.84 Aligned_cols=79 Identities=18% Similarity=0.241 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc---e-EeCCCCCCchhHHHHHHhhhC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMT---D-FINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~---~-v~~~~~~~~~~~~~~i~~~~~ 219 (335)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +++ +.. . ..|-.+ +..+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4688999987 9999999999999999 999999888776543 222 221 1 223332 2333333333211
Q ss_pred -CCCccEEEEcCC
Q 019822 220 -GMGVDYCFECTG 231 (335)
Q Consensus 220 -g~g~d~vid~~g 231 (335)
-.++|++|++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 115899998874
No 327
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.42 E-value=0.12 Score=47.49 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 457899999999999999999999999999999763
No 328
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.076 Score=47.30 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
.++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+ ++.+... . .|-.+ ..+..+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 5678999986 9999999999999999 899999887665543 2234321 1 23222 122333232221 1
Q ss_pred CCCccEEEEcCC
Q 019822 220 GMGVDYCFECTG 231 (335)
Q Consensus 220 g~g~d~vid~~g 231 (335)
+ .+|++|++.|
T Consensus 82 g-~id~li~nAg 92 (275)
T PRK05876 82 G-HVDVVFSNAG 92 (275)
T ss_pred C-CCCEEEECCC
Confidence 2 6899999887
No 329
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.12 Score=44.85 Aligned_cols=78 Identities=24% Similarity=0.297 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc-e--EeCCCCCCchhHHH---HHHhhh
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT-D--FINPDDEPNKSISE---LVKGIT 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~-~--v~~~~~~~~~~~~~---~i~~~~ 218 (335)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ + +.+.. . ..|-.+ ...... .+.+..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 9999999999888999 999999887655433 2 22211 1 233332 122222 222222
Q ss_pred CCCCccEEEEcCCC
Q 019822 219 HGMGVDYCFECTGV 232 (335)
Q Consensus 219 ~g~g~d~vid~~g~ 232 (335)
+ ++|++|.+.|.
T Consensus 82 -~-~id~vi~~ag~ 93 (250)
T PRK07774 82 -G-GIDYLVNNAAI 93 (250)
T ss_pred -C-CCCEEEECCCC
Confidence 2 68999998873
No 330
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.38 E-value=0.26 Score=45.82 Aligned_cols=95 Identities=16% Similarity=0.253 Sum_probs=62.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEc--CChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHh---------
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGID--KNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKG--------- 216 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~--~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~--------- 216 (335)
++|.|+|+ |++|..+++..+.. .+ +|++++ ++.+++. .+++++...++-.++ .....+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v 76 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV 76 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence 57889996 99999999988765 46 777775 3334443 347788777654442 12222322
Q ss_pred ---------hhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEE
Q 019822 217 ---------ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 252 (335)
Q Consensus 217 ---------~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 252 (335)
+.....+|+|+.++++...+...+.++..+ -++.+
T Consensus 77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 222346899999998876778888888875 45444
No 331
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.15 Score=45.23 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=34.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~ 190 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~ 46 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAA 46 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 4679999997 9999999999999999 99999988766543
No 332
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.13 Score=44.96 Aligned_cols=79 Identities=16% Similarity=0.109 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|.++++.+...|+ +|+.++++.++.+.+. +.+.. .. .|..+ ..+....+++... -
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4578999987 9999999999999999 9999998877655432 22321 11 23322 1223222332211 1
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
..+|+++++.+
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 15899998876
No 333
>PRK08589 short chain dehydrogenase; Validated
Probab=95.37 E-value=0.12 Score=45.81 Aligned_cols=79 Identities=19% Similarity=0.312 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCc-e--EeCCCCCCchhHHHHHHhhh--CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMT-D--FINPDDEPNKSISELVKGIT--HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~-~--v~~~~~~~~~~~~~~i~~~~--~g 220 (335)
+++++||+|+ +++|.+.++.+...|+ +|+.++++++..+.+++ .+.. . ..|-.+ .......+.+.. .+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 4679999987 9999999998888999 99999988332232332 2321 1 233332 122333333322 13
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
++|++|++.|.
T Consensus 82 -~id~li~~Ag~ 92 (272)
T PRK08589 82 -RVDVLFNNAGV 92 (272)
T ss_pred -CcCEEEECCCC
Confidence 68999998763
No 334
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.37 E-value=0.13 Score=45.40 Aligned_cols=79 Identities=14% Similarity=0.254 Sum_probs=48.0
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822 150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF--INPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v--~~~~~~~~~~~~~~i~~~~-- 218 (335)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+++...+.++ +++.... .|-.+ ..+..+.+.+..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence 5678999983 5899999999888999 8888766543333332 2342222 23222 233333333322
Q ss_pred CCCCccEEEEcCCC
Q 019822 219 HGMGVDYCFECTGV 232 (335)
Q Consensus 219 ~g~g~d~vid~~g~ 232 (335)
.+ ++|+++++.|.
T Consensus 82 ~g-~iD~lVnnAG~ 94 (261)
T PRK08690 82 WD-GLDGLVHSIGF 94 (261)
T ss_pred hC-CCcEEEECCcc
Confidence 13 69999998763
No 335
>PRK06849 hypothetical protein; Provisional
Probab=95.36 E-value=1 Score=42.24 Aligned_cols=96 Identities=14% Similarity=0.007 Sum_probs=59.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
...+|||+|+ .+.|+..+..++..|. +|++++.++.......+. .....++....++..+.+.+.++....++|+++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 4578999998 6789999999999999 999999876544322111 111223221112245777777776666899999
Q ss_pred EcCCChHHHHHHHHhhccC
Q 019822 228 ECTGVPSLLSEALETTKVG 246 (335)
Q Consensus 228 d~~g~~~~~~~~~~~l~~~ 246 (335)
-+......+....+.+...
T Consensus 82 P~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 82 PTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred ECChHHHhHHhhhhhhcCC
Confidence 7765332222333445443
No 336
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.35 E-value=0.16 Score=44.50 Aligned_cols=80 Identities=19% Similarity=0.314 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT-HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g 220 (335)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ ++.|.. .. .|-.+ .....+.+.+.. .-
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5689999987 9999999998888899 999999887765443 222321 12 23332 122333333221 11
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
..+|++|++.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 268999998874
No 337
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.34 E-value=0.14 Score=42.68 Aligned_cols=92 Identities=22% Similarity=0.259 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce--EeCCCCCCchhHHHHHHhhhCCCCc
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
++++||-+|+|+ |..++.+++.....+|++++.+++..+.+ ++.+... ++..+ .. ++.....+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d------~~----~~~~~~~f 110 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR------AE----DFQHEEQF 110 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc------hh----hccccCCc
Confidence 478999999764 66666666655434899999998866655 3345332 22222 21 11223379
Q ss_pred cEEEEcC-CC-hHHHHHHHHhhccCCeEEEEE
Q 019822 224 DYCFECT-GV-PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 224 d~vid~~-g~-~~~~~~~~~~l~~~~G~~v~~ 253 (335)
|+|+... .. +..++.+.+.|+++ |+++..
T Consensus 111 D~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 111 DVITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred cEEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 9998532 22 34567778889997 998876
No 338
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.33 E-value=0.13 Score=45.59 Aligned_cols=79 Identities=24% Similarity=0.198 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ + +.+.. .. .|..+ .......+.+... -
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4688999987 9999999999989999 999999887665443 2 22322 11 23322 1223333332211 1
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.++|++|++.|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 26899999877
No 339
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.13 Score=45.61 Aligned_cols=78 Identities=19% Similarity=0.198 Sum_probs=50.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC--c-eE--eCCCCCCchhHHHHHHhhh-C
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--T-DF--INPDDEPNKSISELVKGIT-H 219 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga--~-~v--~~~~~~~~~~~~~~i~~~~-~ 219 (335)
++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+. ..+. . .. .|..+ +.++.. +.+.. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 567999987 9999999998888899 9999998877665442 2221 1 12 23333 233333 44332 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
..++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 1268999998764
No 340
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.16 Score=44.98 Aligned_cols=78 Identities=17% Similarity=0.248 Sum_probs=47.7
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceE--eCCCCCCchhHHHHHHhhhC-
Q 019822 150 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 150 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
+++++||+|++ ++|.++++.+...|+ +|+.+++++...+.+++ .+.... .|-.+ +.+..+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 56889999873 799999998888999 89888876321222222 232222 23322 2333333333322
Q ss_pred -CCCccEEEEcCC
Q 019822 220 -GMGVDYCFECTG 231 (335)
Q Consensus 220 -g~g~d~vid~~g 231 (335)
+ .+|++|++.|
T Consensus 82 ~g-~iD~linnAg 93 (262)
T PRK07984 82 WP-KFDGFVHSIG 93 (262)
T ss_pred cC-CCCEEEECCc
Confidence 3 5899999887
No 341
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.31 E-value=0.15 Score=44.39 Aligned_cols=79 Identities=25% Similarity=0.206 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFI--NPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g 220 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. +.+.. .++ |..+ .....+.++++.. -
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999999988999 9999998877655432 22321 222 2222 1223333333221 1
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.++|++|.+.+
T Consensus 79 ~~~d~vi~~ag 89 (250)
T TIGR03206 79 GPVDVLVNNAG 89 (250)
T ss_pred CCCCEEEECCC
Confidence 26899999886
No 342
>PRK06484 short chain dehydrogenase; Validated
Probab=95.31 E-value=0.072 Score=52.04 Aligned_cols=79 Identities=22% Similarity=0.338 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGIT--HGMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~g 222 (335)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|-.+ +....+.+.+.. .+ +
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~ 79 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFG-R 79 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhC-C
Confidence 5688999987 9999999999999999 999999988876654 4455322 233332 133333333322 13 6
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|++.|.
T Consensus 80 iD~li~nag~ 89 (520)
T PRK06484 80 IDVLVNNAGV 89 (520)
T ss_pred CCEEEECCCc
Confidence 9999998764
No 343
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.31 E-value=0.17 Score=44.16 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
+++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+.. .. .|-.+ +.+....+++.. -
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999987 9999999998888899 999999987765443 233421 12 23332 133333333321 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ .+|.+|.+.|.
T Consensus 87 ~-~id~vi~~ag~ 98 (256)
T PRK06124 87 G-RLDILVNNVGA 98 (256)
T ss_pred C-CCCEEEECCCC
Confidence 3 68999988774
No 344
>PRK08328 hypothetical protein; Provisional
Probab=95.29 E-value=0.15 Score=44.23 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
.+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998999998554
No 345
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.15 Score=46.29 Aligned_cols=40 Identities=30% Similarity=0.346 Sum_probs=34.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~ 190 (335)
.+++++|+|+ +++|.+++..+...|+ +|+.+++++++.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~ 53 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA 53 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 4688999987 9999999998888999 99999998876554
No 346
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.17 Score=44.94 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=50.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc-eE--eCCCCCCchhHHHHHHhhh-CCCCccE
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMT-DF--INPDDEPNKSISELVKGIT-HGMGVDY 225 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g~d~ 225 (335)
+++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++ .+.. .+ .|..+ .....+.+.+.. ...++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999987 9999999998888899 99999998887766543 2221 11 23332 122333333321 1126899
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
+|++.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998763
No 347
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.28 E-value=0.35 Score=36.65 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=60.1
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh
Q 019822 154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 233 (335)
Q Consensus 154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~ 233 (335)
|+|+|.|.+|..+++.++..+. +|++++.++++.+.+++.|.. ++..+. .+ ...+++. +=..++.++-+++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~-~~~l~~a-~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TD-PEVLERA-GIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TS-HHHHHHT-TGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hh-hhHHhhc-CccccCEEEEccCCH
Confidence 5788999999999999999776 999999999999999888854 443332 11 2234433 223788888887765
Q ss_pred HHHH---HHHHhhccCCeEEEEE
Q 019822 234 SLLS---EALETTKVGKGKVIVI 253 (335)
Q Consensus 234 ~~~~---~~~~~l~~~~G~~v~~ 253 (335)
..-. ..++.+.+. .+++..
T Consensus 74 ~~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 74 EENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHHCCC-CeEEEE
Confidence 3222 233334454 455544
No 348
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.28 E-value=0.14 Score=44.21 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=54.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 230 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~ 230 (335)
.++|+|+|.+|..+++.+...|. +|++++.++++.+.. . +++. +++..+. . -.+.+++. +=..+|+++-++
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~---t-~~~~L~~a-gi~~aD~vva~t 74 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA---T-DEDVLEEA-GIDDADAVVAAT 74 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC---C-CHHHHHhc-CCCcCCEEEEee
Confidence 57889999999999999999999 999999999987773 3 3554 3443332 1 12334443 334799999988
Q ss_pred CCh
Q 019822 231 GVP 233 (335)
Q Consensus 231 g~~ 233 (335)
+..
T Consensus 75 ~~d 77 (225)
T COG0569 75 GND 77 (225)
T ss_pred CCC
Confidence 875
No 349
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.27 E-value=0.1 Score=42.33 Aligned_cols=81 Identities=21% Similarity=0.227 Sum_probs=48.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHH----HhcCCce-EeCCCCCCchhHHHHHHhhh-CCCC
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKG----KAFGMTD-FINPDDEPNKSISELVKGIT-HGMG 222 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~--~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~-~g~g 222 (335)
+++||+|+ +++|.+.++.+...|..+|+.+.++ .++.+.+ +..+... ++..+-....+....+++.. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899987 9999998888887777688888888 4443332 3344321 22211111233344444332 2237
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 8999998875
No 350
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.27 E-value=0.1 Score=52.64 Aligned_cols=76 Identities=25% Similarity=0.358 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceEeCCCCCCch
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPNK 208 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 208 (335)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|.+...+..- ..
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v--~~ 402 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEV--GK 402 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEe--CC
Confidence 47899999999999999999999999 8999986532 345566777654333221 00
Q ss_pred hHHHHHHhhhCCCCccEEEEcCCC
Q 019822 209 SISELVKGITHGMGVDYCFECTGV 232 (335)
Q Consensus 209 ~~~~~i~~~~~g~g~d~vid~~g~ 232 (335)
+. .+.++. .++|.||.++|.
T Consensus 403 ~i--~~~~~~--~~~DavilAtGa 422 (654)
T PRK12769 403 DI--SLESLL--EDYDAVFVGVGT 422 (654)
T ss_pred cC--CHHHHH--hcCCEEEEeCCC
Confidence 10 111111 269999998885
No 351
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=95.24 E-value=0.11 Score=45.64 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----Cc------eEeCCCCCCchhHHHHHHhhh
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MT------DFINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----a~------~v~~~~~~~~~~~~~~i~~~~ 218 (335)
...++|||+|+|. |..+-.++++-..++|.+++.+++-.+.++++- .. .++. .|-...+++..
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~ 147 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQ 147 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSS
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhcc
Confidence 3688999998654 556677777776669999999998888886642 11 1221 33455566644
Q ss_pred CCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822 219 HGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 219 ~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
.. .+|+|+ |... +.+.++.+.+.|+++ |.++.-.
T Consensus 148 ~~-~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 148 EE-KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp ST--EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CC-cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 33 799997 6554 235778899999998 9888764
No 352
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.22 E-value=0.17 Score=41.77 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=29.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
+|+|+|+|++|...++.+...|..++..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899998765
No 353
>PRK08317 hypothetical protein; Provisional
Probab=95.22 E-value=0.24 Score=42.61 Aligned_cols=103 Identities=24% Similarity=0.376 Sum_probs=68.5
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCc-eEeCCCCCCchhHHHHHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVK 215 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~ 215 (335)
+.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +.. .....+. ..+
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 34567788999999999976 888889988774 23999999999888887654 111 1111111 000
Q ss_pred hhhCCCCccEEEEcC-----C-ChHHHHHHHHhhccCCeEEEEEcc
Q 019822 216 GITHGMGVDYCFECT-----G-VPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 216 ~~~~g~g~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
.+..+ .+|+|+... . -...+..+.+.|+++ |.++....
T Consensus 82 ~~~~~-~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 82 PFPDG-SFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCCCC-CceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 12223 789888532 1 234678999999998 99887653
No 354
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.074 Score=47.00 Aligned_cols=76 Identities=20% Similarity=0.333 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCCccEE
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMGVDYC 226 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d~v 226 (335)
+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+... +... ..|..+ +.++...+++.. .+ .+|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g-~~d~l 77 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAG-RIDVL 77 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCC-CCCEE
Confidence 468999987 9999999999888999 9999998876554321 2221 223332 233444443321 13 68999
Q ss_pred EEcCCC
Q 019822 227 FECTGV 232 (335)
Q Consensus 227 id~~g~ 232 (335)
|++.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 998874
No 355
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.1 Score=44.83 Aligned_cols=75 Identities=20% Similarity=0.202 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.++ .+... ...|-.+ .......+.+.....+.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999987 9999999999999999 99999987654 11111 1223322 133334444443333689999
Q ss_pred EcCCC
Q 019822 228 ECTGV 232 (335)
Q Consensus 228 d~~g~ 232 (335)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98774
No 356
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.18 Score=44.67 Aligned_cols=79 Identities=11% Similarity=0.103 Sum_probs=50.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCC-ceEe--CCCCCCchhHHHHHHhhhC-CCCcc
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGM-TDFI--NPDDEPNKSISELVKGITH-GMGVD 224 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga-~~v~--~~~~~~~~~~~~~i~~~~~-g~g~d 224 (335)
++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+ ++. ...+ |..+ +..+...+.+... -.++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 468999987 9999999998888898 99999998887765533 221 1122 2222 1223232332211 12689
Q ss_pred EEEEcCCC
Q 019822 225 YCFECTGV 232 (335)
Q Consensus 225 ~vid~~g~ 232 (335)
.+|.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99998874
No 357
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.19 E-value=0.23 Score=44.69 Aligned_cols=43 Identities=21% Similarity=0.191 Sum_probs=37.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga 196 (335)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999988888888898 99999999999888877765
No 358
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.18 E-value=0.17 Score=40.26 Aligned_cols=32 Identities=31% Similarity=0.378 Sum_probs=28.9
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
+|+|+|+|++|...+..+...|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999889999865
No 359
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.18 E-value=0.14 Score=44.81 Aligned_cols=36 Identities=28% Similarity=0.394 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 457899999999999999999999998998887543
No 360
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.17 E-value=0.4 Score=41.07 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEe------CC-CCCCchhHHHHHHhhh--
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFI------NP-DDEPNKSISELVKGIT-- 218 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~------~~-~~~~~~~~~~~i~~~~-- 218 (335)
.++.+||+.|+|. |.-++-||. .|+ +|++++.|+.-.+.+ ++.+..... .. ....-.-....+.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5778999999874 777777775 799 999999999888775 333321000 00 0000000011111111
Q ss_pred CCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEcc
Q 019822 219 HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 219 ~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
....+|.|+|+..- +..+..+.++|+++ |+++.+..
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 01268999996531 23567889999997 98776654
No 361
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.16 Score=45.88 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=33.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~ 190 (335)
.++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~ 55 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKA 55 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 5688999987 9999999998888899 99999988776543
No 362
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.17 E-value=0.11 Score=46.31 Aligned_cols=80 Identities=19% Similarity=0.186 Sum_probs=53.6
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc------eEeCCCCCCchhHHHHHHh-
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT------DFINPDDEPNKSISELVKG- 216 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~------~v~~~~~~~~~~~~~~i~~- 216 (335)
-.++.+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+..++ .+.. .+.|... +.+..+.+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence 46788999986 8999999999999999 99999999988766432 2221 2233332 1233222222
Q ss_pred --hhCCCCccEEEEcCCC
Q 019822 217 --ITHGMGVDYCFECTGV 232 (335)
Q Consensus 217 --~~~g~g~d~vid~~g~ 232 (335)
...| ++|+++++.|.
T Consensus 83 ~~~~~G-kidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFG-KIDILVNNAGA 99 (270)
T ss_pred HHHhCC-CCCEEEEcCCc
Confidence 2234 79999987764
No 363
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.17 E-value=0.21 Score=43.62 Aligned_cols=80 Identities=19% Similarity=0.246 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ . ..+.. .. .|-.+ ...+...+.+... .
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 9999999999988999 999999887765443 2 22321 12 23222 1223333322211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|+++++.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 268999998874
No 364
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.19 Score=43.64 Aligned_cols=78 Identities=17% Similarity=0.239 Sum_probs=49.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----c--CCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F--GMT-DF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l--ga~-~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ . +.. ++ .|..+ .....+.++++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 467999987 9999998888888898 99999998877655421 1 211 12 23333 2333333333221
Q ss_pred CCCccEEEEcCC
Q 019822 220 GMGVDYCFECTG 231 (335)
Q Consensus 220 g~g~d~vid~~g 231 (335)
-.++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 126899999876
No 365
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.16 E-value=0.22 Score=44.78 Aligned_cols=94 Identities=17% Similarity=0.209 Sum_probs=65.7
Q ss_pred ccccchhhhhHHHHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822 130 FLSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207 (335)
Q Consensus 130 ~l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~ 207 (335)
.+||....... +.+..++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 34554333333 3455554 57999999997 6999999999999999 9999864321
Q ss_pred hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+..+.+ +..|+|+-++|.+..+...+ ++++ ..++++|..
T Consensus 195 -~l~e~~------~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALC------RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHH------hcCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 111112 15799999999887666555 7886 888998854
No 366
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.17 Score=44.32 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--ceE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TDF--INPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~~v--~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ +++.. -.. .|-.+ .......+.+... -.++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999987 9999999988888899 999999988776554 33321 112 23332 1222233332211 1258
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999998864
No 367
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.16 E-value=0.019 Score=46.17 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=58.2
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCC--C-chhHHHHHHhhhCCCCccEEEEcC
Q 019822 154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE--P-NKSISELVKGITHGMGVDYCFECT 230 (335)
Q Consensus 154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~--~-~~~~~~~i~~~~~g~g~d~vid~~ 230 (335)
|+|+|+|++|...+..++..|. +|..+.+++ +.+.+++.|........+. . ....... ......+|+||-|+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV 75 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence 6899999999998888887999 999999877 7776766553211111000 0 0000000 01123799999998
Q ss_pred CChH---HHHHHHHhhccCCeEEEEEccCCC
Q 019822 231 GVPS---LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 231 g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
-... .++.+...+.+. ..++.+.+..+
T Consensus 76 Ka~~~~~~l~~l~~~~~~~-t~iv~~qNG~g 105 (151)
T PF02558_consen 76 KAYQLEQALQSLKPYLDPN-TTIVSLQNGMG 105 (151)
T ss_dssp SGGGHHHHHHHHCTGEETT-EEEEEESSSSS
T ss_pred cccchHHHHHHHhhccCCC-cEEEEEeCCCC
Confidence 6642 333444444554 57777765543
No 368
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.15 E-value=0.16 Score=43.38 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
...+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999889999976
No 369
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.14 E-value=0.19 Score=44.99 Aligned_cols=67 Identities=18% Similarity=0.293 Sum_probs=49.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 232 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~ 232 (335)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|..... . .+. +.+ ++.|+||-|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~--~----~~~-~~~------~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA--S----TDL-SLL------KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc--c----CCH-hHh------cCCCEEEEcCCH
Confidence 58899999999998888888898 999999999988888777742111 1 111 111 267999998875
Q ss_pred h
Q 019822 233 P 233 (335)
Q Consensus 233 ~ 233 (335)
.
T Consensus 68 ~ 68 (279)
T PRK07417 68 G 68 (279)
T ss_pred H
Confidence 4
No 370
>PLN02244 tocopherol O-methyltransferase
Probab=95.14 E-value=0.076 Score=48.98 Aligned_cols=95 Identities=20% Similarity=0.328 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc-e--EeCCCCCCchhHHHHHHhhhCCC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-D--FINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~-~--v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
.++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++. +.. . .+..+. .+ + .+.. .
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~----~-~~~~-~ 185 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LN----Q-PFED-G 185 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---cc----C-CCCC-C
Confidence 6788999999864 6677888887788 999999999877766442 321 1 111111 00 0 1122 3
Q ss_pred CccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEcc
Q 019822 222 GVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 222 g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
.||+|+..... ...+.++.+.|+++ |+++....
T Consensus 186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 186 QFDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred CccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 79999863321 23678889999998 99988654
No 371
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.19 Score=43.98 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HH-H---HHhcCCc-eE--eCCCCCCchhHHHHHHhhh--
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE-K---GKAFGMT-DF--INPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~-~---~~~lga~-~v--~~~~~~~~~~~~~~i~~~~-- 218 (335)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++ .+ . +++.+.. .. .|-.+ ..+..+.+.+..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999986 9999999999999999 99998876532 22 2 2333422 12 23222 123333333321
Q ss_pred CCCCccEEEEcCCC
Q 019822 219 HGMGVDYCFECTGV 232 (335)
Q Consensus 219 ~g~g~d~vid~~g~ 232 (335)
-+ ++|++|++.|.
T Consensus 84 ~g-~id~li~~ag~ 96 (254)
T PRK06114 84 LG-ALTLAVNAAGI 96 (254)
T ss_pred cC-CCCEEEECCCC
Confidence 13 68999998874
No 372
>PRK08223 hypothetical protein; Validated
Probab=95.14 E-value=0.11 Score=46.36 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|+|+|+|++|..+++.+..+|..++..+|.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 467899999999999999999999999999988554
No 373
>PRK07574 formate dehydrogenase; Provisional
Probab=95.13 E-value=0.26 Score=46.16 Aligned_cols=45 Identities=22% Similarity=0.449 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 195 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg 195 (335)
.+++|.|+|.|.+|...++.++.+|. +|++.+++....+..+++|
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 56789999999999999999999999 9999998753333333333
No 374
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.10 E-value=0.16 Score=44.79 Aligned_cols=78 Identities=15% Similarity=0.242 Sum_probs=47.9
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-Hhc-CCc-e--EeCCCCCCchhHHHHHHhhh
Q 019822 150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAF-GMT-D--FINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~l-ga~-~--v~~~~~~~~~~~~~~i~~~~ 218 (335)
.++++||+|+ +++|.++++.+...|+ +|+.++++. ++.+.+ +++ +.. . ..|-.+ .....+.+++..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4688999986 5999999999988999 898886543 333333 333 211 1 123332 233333333332
Q ss_pred C--CCCccEEEEcCC
Q 019822 219 H--GMGVDYCFECTG 231 (335)
Q Consensus 219 ~--g~g~d~vid~~g 231 (335)
. | ++|+++++.|
T Consensus 83 ~~~g-~ld~lv~nag 96 (257)
T PRK08594 83 EEVG-VIHGVAHCIA 96 (257)
T ss_pred HhCC-CccEEEECcc
Confidence 2 3 6999998876
No 375
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.10 E-value=0.21 Score=44.03 Aligned_cols=94 Identities=20% Similarity=0.203 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc---eEeCCCCCCchhHHHHHHhhhCCC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. |.. .++..+ .. .+.....+
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d------~~-~l~~~~~~- 111 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA------AQ-DIAQHLET- 111 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC------HH-HHhhhcCC-
Confidence 4567899888874 7777788774 77 999999999988877543 321 122111 11 12222233
Q ss_pred CccEEEEcC-----CC-hHHHHHHHHhhccCCeEEEEEc
Q 019822 222 GVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 222 g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 254 (335)
.+|+|+... .. ...+..+.+.|+++ |+++.+-
T Consensus 112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 799998532 22 24578899999998 9987653
No 376
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.2 Score=44.61 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=48.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhCCCCc
Q 019822 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
++.+||+|+|++|.+++..+. .|+ +|+.+++++++.+.+ ++.+.. .. .|-.+ .....+.+.+...-.++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 457888898999999998885 798 999999987765443 222322 12 23332 12333333332111269
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|++|++.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999998874
No 377
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.07 E-value=0.1 Score=45.24 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DFI--NPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g 220 (335)
.++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+ ++.+.. .++ |-.+ .......+++... -
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 4578999987 9999999998888899 999999986654432 223321 122 2222 1223333322211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
..+|.+|.+.+.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 268999988754
No 378
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.06 E-value=0.13 Score=45.06 Aligned_cols=79 Identities=18% Similarity=0.272 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-DF--INPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
.++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. +++.. .. .|-.+ .......+++... ...+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3578999987 9999999999988999 9999999888766543 33321 11 22222 1233333332211 1268
Q ss_pred cEEEEcCC
Q 019822 224 DYCFECTG 231 (335)
Q Consensus 224 d~vid~~g 231 (335)
|+++.+.+
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99998876
No 379
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.06 E-value=0.23 Score=44.41 Aligned_cols=87 Identities=18% Similarity=0.305 Sum_probs=55.8
Q ss_pred EEEEEcCCHHHHHH-HHHHHHcCCCEEEEEc-CChhh--HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 153 SVAVLGLGTVGLGA-VDGARMHGAAKIIGID-KNPWK--KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 153 ~VlI~G~g~vG~~a-i~la~~~G~~~V~~~~-~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
+|.|+|+|.+|... ..+.+.-+. ++.+++ .++++ ++.++++|....++ ++...+ ....+|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll----~~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLL----ANPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHh----cCCCCCEEEE
Confidence 68899999999855 556555566 665544 44443 45677888654331 122222 2237999999
Q ss_pred cCCChHHHHHHHHhhccCCeEEEE
Q 019822 229 CTGVPSLLSEALETTKVGKGKVIV 252 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~~G~~v~ 252 (335)
+++.....+.+..++..+ -++++
T Consensus 71 aTp~~~H~e~a~~al~aG-k~VId 93 (285)
T TIGR03215 71 ATSAKAHARHARLLAELG-KIVID 93 (285)
T ss_pred CCCcHHHHHHHHHHHHcC-CEEEE
Confidence 999887777777777774 34443
No 380
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.05 E-value=0.32 Score=43.46 Aligned_cols=89 Identities=24% Similarity=0.204 Sum_probs=62.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
+|-.+|.|.+|.-.++=+...|+ .|.+.++++++ .+++++.|+...- +..+.++ ..|+||-+++
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~------~aDvVitmv~ 66 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA------EADVVITMLP 66 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH------hCCEEEEecC
Confidence 57788999999998888888999 99999999999 8888888875321 1112222 5788888877
Q ss_pred ChHHHHHHH-------HhhccCCeEEEEEccCC
Q 019822 232 VPSLLSEAL-------ETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 232 ~~~~~~~~~-------~~l~~~~G~~v~~g~~~ 257 (335)
..+.++..+ +.++++ ..+|+++..+
T Consensus 67 ~~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis 98 (286)
T COG2084 67 DDAAVRAVLFGENGLLEGLKPG-AIVIDMSTIS 98 (286)
T ss_pred CHHHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence 765555444 223455 6666666554
No 381
>PLN02253 xanthoxin dehydrogenase
Probab=95.05 E-value=0.15 Score=45.23 Aligned_cols=79 Identities=22% Similarity=0.210 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--c-eE--eCCCCCCchhHHHHHHhhh--CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--T-DF--INPDDEPNKSISELVKGIT--HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~-~v--~~~~~~~~~~~~~~i~~~~--~g 220 (335)
.++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++. . .. .|-.+ .....+.+.+.. .+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4678999987 9999999998888999 999999877655433 33321 1 11 23332 122322222221 13
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
++|++|++.|.
T Consensus 94 -~id~li~~Ag~ 104 (280)
T PLN02253 94 -TLDIMVNNAGL 104 (280)
T ss_pred -CCCEEEECCCc
Confidence 68999998763
No 382
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.04 E-value=0.16 Score=43.86 Aligned_cols=82 Identities=11% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-EeCCCCCCchhHHHHHHhhhC-CCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FINPDDEPNKSISELVKGITH-GMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g 222 (335)
.+.++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... ++..+-.+.....+.+++... -.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999998888999 999999987765443 2223211 222221111233333333211 126
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998764
No 383
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.04 E-value=0.096 Score=45.79 Aligned_cols=109 Identities=18% Similarity=0.216 Sum_probs=67.5
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCce-EeCCCCCCchhHH-HHH
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTD-FINPDDEPNKSIS-ELV 214 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~-~~i 214 (335)
+....++.||++|+=-|.|+ |.+...|++..|. .+|+..+..+++.+.+ +.+|... |--.+ .|.. +..
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~----~Dv~~~g~ 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH----RDVCEEGF 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE----S-GGCG--
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe----cceecccc
Confidence 45678999999999887653 7788888887763 4999999999887766 4456432 21111 1111 111
Q ss_pred HhhhCCCCccEEE-EcCCChHHHHHHHHhh-ccCCeEEEEEccCC
Q 019822 215 KGITHGMGVDYCF-ECTGVPSLLSEALETT-KVGKGKVIVIGVGV 257 (335)
Q Consensus 215 ~~~~~g~g~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~ 257 (335)
.+-.+ ..+|.|| |--.-...+..+.+.| +++ |+++.+...-
T Consensus 107 ~~~~~-~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~i 149 (247)
T PF08704_consen 107 DEELE-SDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPCI 149 (247)
T ss_dssp STT-T-TSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESSH
T ss_pred ccccc-CcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCH
Confidence 11111 3689887 5544445789999999 887 9999996554
No 384
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.11 Score=45.69 Aligned_cols=80 Identities=21% Similarity=0.279 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCc-eE--eCCCCCCchhHHHHHHhhhC-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMT-DF--INPDDEPNKSISELVKGITH-GM 221 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~ 221 (335)
.++++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+++ .+.. .. .|-.+ ..+....+.+... -.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999999988999 89999988754433332 2322 11 23222 1222222222211 12
Q ss_pred CccEEEEcCCC
Q 019822 222 GVDYCFECTGV 232 (335)
Q Consensus 222 g~d~vid~~g~ 232 (335)
.+|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 385
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.02 E-value=0.23 Score=40.22 Aligned_cols=85 Identities=14% Similarity=0.084 Sum_probs=53.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC------ceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM------TDFINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga------~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
+|.|+|+|..|.+++.++...|. +|....++++..+.+++-+. ...+..+-.-..+..+.+ ++.|++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~------~~ad~I 73 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL------EDADII 73 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH------TT-SEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh------CcccEE
Confidence 57899999999999999999998 99999999888777754221 011111000002233333 268999
Q ss_pred EEcCCChHHHHHHHHhhcc
Q 019822 227 FECTGVPSLLSEALETTKV 245 (335)
Q Consensus 227 id~~g~~~~~~~~~~~l~~ 245 (335)
+-++.+. ..+..++.+.+
T Consensus 74 iiavPs~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 74 IIAVPSQ-AHREVLEQLAP 91 (157)
T ss_dssp EE-S-GG-GHHHHHHHHTT
T ss_pred EecccHH-HHHHHHHHHhh
Confidence 9988876 45666665554
No 386
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.02 E-value=0.2 Score=47.21 Aligned_cols=82 Identities=21% Similarity=0.271 Sum_probs=51.5
Q ss_pred cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHhc-CCceE-eCCCCCCchhHHHHHH
Q 019822 146 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-------KGKAF-GMTDF-INPDDEPNKSISELVK 215 (335)
Q Consensus 146 ~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~-------~~~~l-ga~~v-~~~~~~~~~~~~~~i~ 215 (335)
.+-..+.+|||+|+ |.+|..++..+...|+ +|++++++..+.+ ..... +...+ .|..+ +..+...++
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence 34456789999987 9999999999988999 9999998765431 11112 22222 23333 122333333
Q ss_pred hhhCCCCccEEEEcCCC
Q 019822 216 GITHGMGVDYCFECTGV 232 (335)
Q Consensus 216 ~~~~g~g~d~vid~~g~ 232 (335)
.. +.++|+||+|.+.
T Consensus 132 ~~--~~~~D~Vi~~aa~ 146 (390)
T PLN02657 132 SE--GDPVDVVVSCLAS 146 (390)
T ss_pred Hh--CCCCcEEEECCcc
Confidence 22 1169999998763
No 387
>PRK07985 oxidoreductase; Provisional
Probab=95.01 E-value=0.48 Score=42.63 Aligned_cols=80 Identities=19% Similarity=0.058 Sum_probs=48.0
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~ 218 (335)
-.++++||+|+ |.+|.++++.+...|+ +|+.+.++. ++.+.+ ++.+... ..|-.+ .....+.+++..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 123 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAH 123 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence 35678999987 9999999999999999 888876542 233222 2333221 123332 122333333322
Q ss_pred C-CCCccEEEEcCC
Q 019822 219 H-GMGVDYCFECTG 231 (335)
Q Consensus 219 ~-g~g~d~vid~~g 231 (335)
. ..++|+++++.|
T Consensus 124 ~~~g~id~lv~~Ag 137 (294)
T PRK07985 124 KALGGLDIMALVAG 137 (294)
T ss_pred HHhCCCCEEEECCC
Confidence 1 126899998776
No 388
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.01 E-value=0.28 Score=44.37 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=37.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga 196 (335)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.|.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 57889999999988888888898 99999999999888877664
No 389
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=95.00 E-value=0.64 Score=41.19 Aligned_cols=102 Identities=12% Similarity=0.158 Sum_probs=63.0
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822 145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~~ 219 (335)
....+++++||=+|+|+ |..++.++..++ ...|++++.++++.+.+ +.+|...+.-.. .+.. .+.. ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~----~D~~-~~~~-~~ 138 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN----FDGR-VFGA-AV 138 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec----CCHH-Hhhh-hc
Confidence 34678899999888764 555666666653 23899999999988766 445654321111 1111 1111 12
Q ss_pred CCCccEEE-E--cCCC-------------------------hHHHHHHHHhhccCCeEEEEEcc
Q 019822 220 GMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 220 g~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
+ .||.|+ | |+|. ...+..+++.++++ |+++....
T Consensus 139 ~-~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc 200 (264)
T TIGR00446 139 P-KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC 200 (264)
T ss_pred c-CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 2 599887 5 4443 12667788899997 98875543
No 390
>PLN03075 nicotianamine synthase; Provisional
Probab=95.00 E-value=0.18 Score=45.23 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcC-C----ceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFG-M----TDFINPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg-a----~~v~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
.++++|+-+|+|+.++.++.+++... -.+++.++.+++..+.+++.- . ..-+.... .+..+. ...-.+
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~---~~~l~~ 195 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV---TESLKE 195 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc---ccccCC
Confidence 37789999999998998888886553 238999999999888876543 1 11111111 112111 111237
Q ss_pred ccEEEEcC-------CChHHHHHHHHhhccCCeEEEEEc
Q 019822 223 VDYCFECT-------GVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 223 ~d~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
||+||-.+ .....++.+.+.|+++ |.++.-.
T Consensus 196 FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 196 YDVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred cCEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 99998544 2235778999999997 8777664
No 391
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.99 E-value=0.29 Score=45.51 Aligned_cols=61 Identities=26% Similarity=0.309 Sum_probs=45.1
Q ss_pred CCcccccccccchhhhhHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822 123 IDPSDASFLSCGFTTGYGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186 (335)
Q Consensus 123 ~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~ 186 (335)
....+|....+.+++- .+ .+..+. -.+.+|.|-|.|.+|+.+++.+...|+ +|++++.++.
T Consensus 180 ~~r~~aTg~Gv~~~~~-~a-~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 180 LGRSEATGYGVFYAIR-EA-LKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCCCcccceehHHHHH-HH-HHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 3445566565444433 33 344444 589999999999999999999999999 9998887766
No 392
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.99 E-value=0.091 Score=37.17 Aligned_cols=62 Identities=16% Similarity=0.228 Sum_probs=43.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 230 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~ 230 (335)
+|+|+|+|.+|.-++..++.+|. +|+.+.+++.-. ..-+ .+....+++....+++++.+++.
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~-~vtli~~~~~~~------------~~~~---~~~~~~~~~~l~~~gV~v~~~~~ 62 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGK-EVTLIERSDRLL------------PGFD---PDAAKILEEYLRKRGVEVHTNTK 62 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTS-EEEEEESSSSSS------------TTSS---HHHHHHHHHHHHHTTEEEEESEE
T ss_pred CEEEECcCHHHHHHHHHHHHhCc-EEEEEeccchhh------------hhcC---HHHHHHHHHHHHHCCCEEEeCCE
Confidence 58899999999999999999998 999998754311 1111 44555555555445788777653
No 393
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.98 E-value=0.16 Score=42.95 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
...+|+|+|+|++|.-++..+...|.+++..+|.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999999899999855
No 394
>PRK09242 tropinone reductase; Provisional
Probab=94.97 E-value=0.23 Score=43.47 Aligned_cols=79 Identities=11% Similarity=0.191 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc-----CCc-eE--eCCCCCCchhHHHHHHhhh-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMT-DF--INPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~- 218 (335)
.++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+. ++ +.. .. .|-.+ ..+....+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999987 9999999999999999 9999998887765442 21 211 11 23322 122222222221
Q ss_pred -CCCCccEEEEcCCC
Q 019822 219 -HGMGVDYCFECTGV 232 (335)
Q Consensus 219 -~g~g~d~vid~~g~ 232 (335)
-+ ++|+++.+.|.
T Consensus 85 ~~g-~id~li~~ag~ 98 (257)
T PRK09242 85 HWD-GLHILVNNAGG 98 (257)
T ss_pred HcC-CCCEEEECCCC
Confidence 13 69999998874
No 395
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.97 E-value=0.42 Score=41.03 Aligned_cols=78 Identities=26% Similarity=0.265 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP----------WKKEKGKAFGMTDFINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~----------~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~ 218 (335)
-.+.+|+|.|.|.+|+.+++++...|.+.|.+.+.+. +..+..++.+....++..+ .. .-.++.
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~-----~~-~~~~l~ 94 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQD-----YF-PGEAIL 94 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCccc-----cc-Ccccce
Confidence 4678999999999999999999999985566666655 5555555544221111100 00 001111
Q ss_pred CCCCccEEEEcCCCh
Q 019822 219 HGMGVDYCFECTGVP 233 (335)
Q Consensus 219 ~g~g~d~vid~~g~~ 233 (335)
...+|+++-|....
T Consensus 95 -~~~~DVlipaA~~~ 108 (217)
T cd05211 95 -GLDVDIFAPCALGN 108 (217)
T ss_pred -eccccEEeeccccC
Confidence 22688998887655
No 396
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.17 Score=44.24 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhC-CCCccEE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC 226 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g~d~v 226 (335)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++. ........ ..|..+ ..+..+.+.+... ...+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999987 9999999999988999 999999876551 11111111 223332 1223333332211 1268999
Q ss_pred EEcCC
Q 019822 227 FECTG 231 (335)
Q Consensus 227 id~~g 231 (335)
|.+.|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99876
No 397
>PRK06398 aldose dehydrogenase; Validated
Probab=94.97 E-value=0.03 Score=49.29 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC-CCCccEEE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF 227 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~-g~g~d~vi 227 (335)
.++++||+|+ +.+|.+++..+...|+ +|+.+++++++...+. ....|-.+ +....+.+.+... -.++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~----~~~~D~~~--~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYNDVD----YFKVDVSN--KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCceE----EEEccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999987 9999999999999999 9999988765432110 01123332 1233333333221 12689999
Q ss_pred EcCCC
Q 019822 228 ECTGV 232 (335)
Q Consensus 228 d~~g~ 232 (335)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98763
No 398
>PRK08264 short chain dehydrogenase; Validated
Probab=94.96 E-value=0.18 Score=43.44 Aligned_cols=75 Identities=23% Similarity=0.307 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eE--eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DF--INPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
.++++||+|+ |.+|..+++.+...|+.+|++++++.++.+. .+.. .+ .|-.+ .....+.+++. ..+|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~---~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA---SDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc---CCCCE
Confidence 4678999986 9999999999988998689999987766543 2211 12 23322 12222222221 25899
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
+|.+.|.
T Consensus 77 vi~~ag~ 83 (238)
T PRK08264 77 LVNNAGI 83 (238)
T ss_pred EEECCCc
Confidence 9998876
No 399
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.96 E-value=0.18 Score=44.02 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=50.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce-E--eCCCCCCchhHHHHHHhhhC-CCCccEE
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD-F--INPDDEPNKSISELVKGITH-GMGVDYC 226 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~-v--~~~~~~~~~~~~~~i~~~~~-g~g~d~v 226 (335)
+++|+|+ |.+|.+++..+...|+ +|+++++++++.+.+.+ ++... . .|-.+ .....+.+.+... ..++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899987 9999999999998999 99999999887766533 34321 1 23222 1223333333211 1269999
Q ss_pred EEcCCC
Q 019822 227 FECTGV 232 (335)
Q Consensus 227 id~~g~ 232 (335)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 988764
No 400
>PLN00016 RNA-binding protein; Provisional
Probab=94.95 E-value=0.24 Score=46.34 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=60.7
Q ss_pred CCCEEEEE----cC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----------HHhcCCceEeCCCCCCchhHHHH
Q 019822 150 KGSSVAVL----GL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-----------GKAFGMTDFINPDDEPNKSISEL 213 (335)
Q Consensus 150 ~~~~VlI~----G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-----------~~~lga~~v~~~~~~~~~~~~~~ 213 (335)
...+|||+ |+ |-+|..++..+...|. +|+++++++..... +...+...+. .+...
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d- 121 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD- 121 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-
Confidence 34689999 97 9999999999988899 99999987654221 1223333322 12222
Q ss_pred HHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccC-CeEEEEEcc
Q 019822 214 VKGITHGMGVDYCFECTGVP-SLLSEALETTKVG-KGKVIVIGV 255 (335)
Q Consensus 214 i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~-~G~~v~~g~ 255 (335)
+.+.....++|+||++.+.. .....+++.+... -.++|.++.
T Consensus 122 ~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 122 VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 33333345899999987643 2234555655433 137887664
No 401
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.94 E-value=0.13 Score=45.08 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
.++++||+|+ |.+|.+.++.+...|+ +|++++++ ++.+.+ .+.+.. .. .|-.+ .......+.+... .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 9999999999999999 89988877 333222 233322 12 23332 1223223332211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|++|++.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 168999998763
No 402
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.92 E-value=0.31 Score=43.42 Aligned_cols=93 Identities=22% Similarity=0.214 Sum_probs=63.7
Q ss_pred cccchhhhhHHHHHhcCC-CCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch
Q 019822 131 LSCGFTTGYGAAWKEAKV-EKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208 (335)
Q Consensus 131 l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 208 (335)
+||....... +.+..++ -.|++|+|+|.| .+|.-++.++...|+ +|.+.... + .
T Consensus 137 ~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~-------------------t---~ 192 (285)
T PRK14191 137 VPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL-------------------T---K 192 (285)
T ss_pred CCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC-------------------c---H
Confidence 4544433333 4455554 469999999975 999999999999999 88877421 1 2
Q ss_pred hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 209 ~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
++.+.++ .+|+|+-++|.+..+. -+.++++ ..++.+|..
T Consensus 193 ~l~~~~~------~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 193 DLSFYTQ------NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHH------hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 2222222 5899999999885543 4466886 899999864
No 403
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.92 E-value=0.37 Score=43.37 Aligned_cols=43 Identities=26% Similarity=0.329 Sum_probs=36.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga 196 (335)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999988888878898 99999999988887777664
No 404
>PRK06484 short chain dehydrogenase; Validated
Probab=94.92 E-value=0.19 Score=49.13 Aligned_cols=105 Identities=18% Similarity=0.212 Sum_probs=67.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCce---EeCCCCCCchhHHHHHHhhhC-CCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD---FINPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~---v~~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... ..|-.+ ..+..+.+.+... -..+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 5688999987 9999999999999999 9999999888776654 344322 233332 1233333333221 1268
Q ss_pred cEEEEcCCChH--------------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822 224 DYCFECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 224 d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
|++|++.|... ..+.++..+... |+++.++....
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~ 404 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS 404 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence 99999877420 123334455555 89988876543
No 405
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.91 E-value=0.16 Score=44.80 Aligned_cols=80 Identities=21% Similarity=0.293 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhCC-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHG- 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g- 220 (335)
.++++||+|+ +.+|.+++..+...|+ +|+.+++++++.+.+ ++.+... . .|-.+ .......+.+....
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 5678999987 9999999988888999 899999888765443 2334321 1 23222 12222222222111
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|++|++.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 268999998874
No 406
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.90 E-value=0.083 Score=46.52 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=52.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
+|||+|+++-|..++..+...|. +|+++.+++...+.+.+.|...+....- +- ..+.++....++|+|+|++-
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l----~~-~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGAL----DP-QELREFLKRHSIDILVDATH 74 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCC----CH-HHHHHHHHhcCCCEEEEcCC
Confidence 68999885559999988888898 9999999988887777776555542221 11 22444444558999999875
No 407
>PLN02256 arogenate dehydrogenase
Probab=94.90 E-value=0.48 Score=42.95 Aligned_cols=97 Identities=12% Similarity=0.203 Sum_probs=61.9
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~ 221 (335)
+.+...-....+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|... ..+ ..+.+ . .
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~-----~~e~~----~-~ 91 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD-----PDDFC----E-E 91 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC-----HHHHh----h-C
Confidence 4555666677789999999999999998888887 8999998764 35566677532 111 11111 1 1
Q ss_pred CccEEEEcCCChHHHHHHHHh-----hccCCeEEEEEcc
Q 019822 222 GVDYCFECTGVPSLLSEALET-----TKVGKGKVIVIGV 255 (335)
Q Consensus 222 g~d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 255 (335)
..|+||-|+... .....++. +.++ ..++.++.
T Consensus 92 ~aDvVilavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 92 HPDVVLLCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCCEEEEecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 478888888754 33333333 3344 55666654
No 408
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.90 E-value=0.16 Score=44.40 Aligned_cols=80 Identities=21% Similarity=0.226 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCc-eE--eCCCCCCchhHHHHHHhhh-CCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMT-DF--INPDDEPNKSISELVKGIT-HGMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g 222 (335)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++. ..+.+++++.. .. .|-.+ ..+....+.+.. ...+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence 4678999987 9999999999999999 8888875432 22333444422 11 22221 123333333321 1126
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|++.|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 409
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.89 E-value=0.11 Score=40.44 Aligned_cols=79 Identities=19% Similarity=0.342 Sum_probs=49.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
.-+|-|+|+|.+|..+...++..|. .|..+. ++.++.+.+.+ ++...+.+.. +.. +..|++|-
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~------------~~~--~~aDlv~i 74 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE------------EIL--RDADLVFI 74 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT------------GGG--CC-SEEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc------------ccc--ccCCEEEE
Confidence 4578999999999999999999999 887775 55556666544 3433333322 222 26899999
Q ss_pred cCCChHHHHHHHHhhcc
Q 019822 229 CTGVPSLLSEALETTKV 245 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~ 245 (335)
++... .+..+++.|..
T Consensus 75 avpDd-aI~~va~~La~ 90 (127)
T PF10727_consen 75 AVPDD-AIAEVAEQLAQ 90 (127)
T ss_dssp -S-CC-HHHHHHHHHHC
T ss_pred EechH-HHHHHHHHHHH
Confidence 99887 56777777764
No 410
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.89 E-value=0.45 Score=40.30 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ... .+....+........+|.
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~---~d~~~~l~~~~~~~~~D~ 114 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLC---GDAVEVLLDMFPDGSLDR 114 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEe---cCHHHHHHHHcCccccce
Confidence 667899999875 7788888877643489999999988887743 2322211 111 223223332222336898
Q ss_pred EEEcCC--------------ChHHHHHHHHhhccCCeEEEEEcc
Q 019822 226 CFECTG--------------VPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 226 vid~~g--------------~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
|+-... ....++.+.+.|+++ |+++....
T Consensus 115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~~ 157 (202)
T PRK00121 115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFATD 157 (202)
T ss_pred EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEcC
Confidence 875332 234678999999998 99987643
No 411
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.2 Score=45.41 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=30.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
.++++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4689999987 8999999999999999 99998876
No 412
>PRK06720 hypothetical protein; Provisional
Probab=94.86 E-value=0.25 Score=40.60 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
+++.++|+|+ +++|...+..+...|+ +|+.++++.+..+.. ++.+... . .|..+ ...+.+.+.+.. -
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK--QGDWQRVISITLNAF 91 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5678999987 8899999988888899 999999887655332 2234221 1 22222 122333222211 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
| ++|+++++.|.
T Consensus 92 G-~iDilVnnAG~ 103 (169)
T PRK06720 92 S-RIDMLFQNAGL 103 (169)
T ss_pred C-CCCEEEECCCc
Confidence 3 68999988774
No 413
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.86 E-value=0.3 Score=44.75 Aligned_cols=95 Identities=18% Similarity=0.079 Sum_probs=62.9
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE------eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF------INPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v------~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
-+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+.+.+.... +..+-....+.. +.. +..|+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~----e~~--~~aD~ 77 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPE----EAL--AGADF 77 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHH----HHH--cCCCE
Confidence 368999999999999999888898 99999998887776655421100 000000001122 211 26899
Q ss_pred EEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822 226 CFECTGVPSLLSEALETTKVGKGKVIVIGV 255 (335)
Q Consensus 226 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 255 (335)
|+-++... .+..+++.++++ -.++.+..
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 99999887 457777888775 56666644
No 414
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.86 E-value=0.38 Score=43.88 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=33.8
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~ 190 (335)
++|.|+|+|.+|...++.+...|+ +|...+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 579999999999999999989999 99999999876554
No 415
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.86 E-value=0.17 Score=44.33 Aligned_cols=100 Identities=15% Similarity=0.096 Sum_probs=60.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc--CCceE-eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMTDF-INPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--ga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
...+|||+|+ |.+|..++..+...|+ +|+++.+++++.+..... ++..+ .|..+ . ...+.+... .++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~-~~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIG-DDSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhh-cCCCE
Confidence 4578999997 9999999988888899 999998887765433211 22211 23222 1 122322221 26999
Q ss_pred EEEcCCChH-------------HHHHHHHhhccC-CeEEEEEccC
Q 019822 226 CFECTGVPS-------------LLSEALETTKVG-KGKVIVIGVG 256 (335)
Q Consensus 226 vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 256 (335)
||.+.+... ....+++.+... .++++.++..
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 998876421 123444544432 1578887764
No 416
>PRK06153 hypothetical protein; Provisional
Probab=94.85 E-value=0.1 Score=48.32 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
.+.+|+|+|+|++|..+++++..+|..+++.+|.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 56899999999999999999999999899998854
No 417
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.85 E-value=0.23 Score=43.28 Aligned_cols=79 Identities=23% Similarity=0.201 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh-CC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT-HG 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g 220 (335)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+.. +. .|-.+ +....+.+.+.. ..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4578999987 9999999998888899 999999988766543 222322 11 23322 122323233221 11
Q ss_pred CCccEEEEcCC
Q 019822 221 MGVDYCFECTG 231 (335)
Q Consensus 221 ~g~d~vid~~g 231 (335)
.++|++|.+.+
T Consensus 80 ~~~d~vi~~a~ 90 (258)
T PRK12429 80 GGVDILVNNAG 90 (258)
T ss_pred CCCCEEEECCC
Confidence 26899998876
No 418
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.62 Score=40.58 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=30.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhH
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKK 188 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~-~~~~~~ 188 (335)
.++++||+|+ +.+|.++++.+...|+ +|+.+. +++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4678999987 9999999999999999 887764 444443
No 419
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=94.84 E-value=0.23 Score=42.11 Aligned_cols=97 Identities=23% Similarity=0.182 Sum_probs=72.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
.+..+.+..+|.=+|+|+ |...-.|++...-..+.++++|++-++.+++...+.-+ ....++.+......
T Consensus 24 a~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f---------~~aDl~~w~p~~~~ 93 (257)
T COG4106 24 ARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATF---------EEADLRTWKPEQPT 93 (257)
T ss_pred hhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCce---------ecccHhhcCCCCcc
Confidence 334456677888889986 89999999998766999999999999998776544222 22346666666688
Q ss_pred cEEEEcCC------ChHHHHHHHHhhccCCeEEE
Q 019822 224 DYCFECTG------VPSLLSEALETTKVGKGKVI 251 (335)
Q Consensus 224 d~vid~~g------~~~~~~~~~~~l~~~~G~~v 251 (335)
|++|.+.. .+..+..++..|+++ |.+.
T Consensus 94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA 126 (257)
T COG4106 94 DLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA 126 (257)
T ss_pred chhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence 99985432 355788999999997 7654
No 420
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=94.84 E-value=0.052 Score=48.88 Aligned_cols=33 Identities=33% Similarity=0.397 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 182 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~ 182 (335)
+..+|||+|+|++|--+++++.+.|..++=.++
T Consensus 65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD 97 (427)
T KOG2017|consen 65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVD 97 (427)
T ss_pred CCccEEEEccCCCCCHHHHHHHHcCCCeecccc
Confidence 567899999999999999999999986664444
No 421
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.83 E-value=0.17 Score=43.39 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
++.+|||+|+|.++.-=+..+...|+ +|.+++..-. ..+.+.+.|.-.... ++..+. .+ .++++||-
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~----dl------~g~~LVia 91 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKE----FI------KDKHLIVI 91 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChH----Hh------CCCcEEEE
Confidence 57799999999999888888888999 8888875432 222233333222221 110001 11 27899999
Q ss_pred cCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 229 CTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
|++.+..-..+....... +.++-..
T Consensus 92 ATdD~~vN~~I~~~a~~~-~~lvn~v 116 (223)
T PRK05562 92 ATDDEKLNNKIRKHCDRL-YKLYIDC 116 (223)
T ss_pred CCCCHHHHHHHHHHHHHc-CCeEEEc
Confidence 999884433444444443 5444443
No 422
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.82 E-value=0.25 Score=43.55 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=47.9
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhhC-
Q 019822 150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKN---PWKKEKG-KAFGMTDF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~---~~~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
+++++||+|+ +++|.++++.+...|+ +|+.+.+. +++.+.+ ++++.... .|-.+ +.+..+.+++...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4688999983 5899999988888999 88887543 3333333 34443222 23222 2333333333321
Q ss_pred -CCCccEEEEcCCC
Q 019822 220 -GMGVDYCFECTGV 232 (335)
Q Consensus 220 -g~g~d~vid~~g~ 232 (335)
+ ++|+++++.|.
T Consensus 82 ~g-~iD~lvnnAG~ 94 (260)
T PRK06997 82 WD-GLDGLVHSIGF 94 (260)
T ss_pred hC-CCcEEEEcccc
Confidence 3 69999988763
No 423
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.79 E-value=0.24 Score=44.61 Aligned_cols=93 Identities=17% Similarity=0.254 Sum_probs=55.8
Q ss_pred CEEEEEcCCHHHHH-HHHHHHHcCCCEEEEEc-CChh--hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822 152 SSVAVLGLGTVGLG-AVDGARMHGAAKIIGID-KNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 227 (335)
Q Consensus 152 ~~VlI~G~g~vG~~-ai~la~~~G~~~V~~~~-~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi 227 (335)
-+|.|+|.|.+|.. +..+.+.-+. ++.+++ .+++ .++.++++|....+ .++...+. ...-.++|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~-~~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLA-MPEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHh-CcCCCCCCEEE
Confidence 47899999999987 4444444456 555544 4443 34567778854322 12222222 11124799999
Q ss_pred EcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822 228 ECTGVPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 228 d~~g~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
++++.....+.+..++..+ -++++..
T Consensus 76 ~AT~a~~H~e~a~~a~eaG-k~VID~s 101 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAG-IRAIDLT 101 (302)
T ss_pred ECCCHHHHHHHHHHHHHcC-CeEEECC
Confidence 9999886666666666664 4555543
No 424
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.3 Score=42.34 Aligned_cols=76 Identities=12% Similarity=0.160 Sum_probs=48.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cC-Cc-eEe--CCCCCCchhHHHHHHhhhCCCC
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA---FG-MT-DFI--NPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~---lg-a~-~v~--~~~~~~~~~~~~~i~~~~~g~g 222 (335)
++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++ .+ .. .++ |-.+ ..+..+.+.+.. . .
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~-~-~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSLP-A-L 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHHh-h-c
Confidence 47899987 9999999999988999 999999988766543 21 11 11 122 3222 123333333332 2 5
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|+++.+.|.
T Consensus 77 ~d~vv~~ag~ 86 (243)
T PRK07102 77 PDIVLIAVGT 86 (243)
T ss_pred CCEEEECCcC
Confidence 7999987763
No 425
>PLN03139 formate dehydrogenase; Provisional
Probab=94.76 E-value=0.34 Score=45.31 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=36.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 195 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg 195 (335)
.+++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 9999997754333333444
No 426
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.76 E-value=0.34 Score=43.07 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C-ceEe-----CCCCCCchhHHHHHHhhhCCC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-M-TDFI-----NPDDEPNKSISELVKGITHGM 221 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-a-~~v~-----~~~~~~~~~~~~~i~~~~~g~ 221 (335)
..+++||++|+|. |..+..+++.....++.+++.+++-.+.++++- . ...+ +... .+..+.+++. ..
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~---~D~~~~l~~~--~~ 144 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI---DDGFKFLADT--EN 144 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE---CchHHHHHhC--CC
Confidence 3456999998865 556667777665558999999988777765531 0 0000 0000 2233334332 23
Q ss_pred CccEEE-EcC---C------ChHHHHHHHHhhccCCeEEEEEc
Q 019822 222 GVDYCF-ECT---G------VPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 222 g~d~vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
.+|+|+ |.. + ..+.++.+.+.|+++ |.++...
T Consensus 145 ~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 145 TFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred CccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 799997 443 1 123567888999998 9998763
No 427
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.76 E-value=0.24 Score=49.01 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=55.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
++++|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+. .+. .+ .+.+++ .+=+.+|.++-+++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~-GD~---~~-~~~L~~-a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVL-GNA---AN-EEIMQL-AHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEE-cCC---CC-HHHHHh-cCccccCEEEEEcC
Confidence 678999999999999999999999 999999999999999988865444 222 11 222333 23337888877766
Q ss_pred Ch
Q 019822 232 VP 233 (335)
Q Consensus 232 ~~ 233 (335)
+.
T Consensus 491 ~~ 492 (558)
T PRK10669 491 NG 492 (558)
T ss_pred Ch
Confidence 54
No 428
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.76 E-value=0.26 Score=43.09 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g 220 (335)
.++++||+|+ +.+|..++..+...|+ +|+.++++.++.+.+ ++.+.. .. .|-.+ ..+..+.+++... -
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 9999999998888999 899898887765543 222322 12 33332 1222232322211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|+++++.+.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 268999998873
No 429
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.74 E-value=0.2 Score=45.97 Aligned_cols=95 Identities=18% Similarity=0.165 Sum_probs=62.4
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
-.+++|+|+|+ |.+|..+++.+.. .|..+++.+.+++++.+.+. +++...+ .+ +.+... +.|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~----l~~~l~--~aDi 218 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LS----LEEALP--EADI 218 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------Hh----HHHHHc--cCCE
Confidence 46789999998 9999998888864 57669999999887776653 3431111 11 223222 5899
Q ss_pred EEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822 226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 226 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
|+.+++.+..+..-...+.+. -.+++++.+-+
T Consensus 219 Vv~~ts~~~~~~I~~~~l~~~-~~viDiAvPRD 250 (340)
T PRK14982 219 VVWVASMPKGVEIDPETLKKP-CLMIDGGYPKN 250 (340)
T ss_pred EEECCcCCcCCcCCHHHhCCC-eEEEEecCCCC
Confidence 999888753321222445665 67788877644
No 430
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.73 E-value=0.77 Score=34.91 Aligned_cols=89 Identities=19% Similarity=0.308 Sum_probs=60.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHc--CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 153 SVAVLGLGTVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
+|.|+|.|.+|.....-++.. +. +++ ++++++++.+. .+++|.. .+ .++.+.+.+ .++|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~----~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD----EDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH----TTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh----hcCCEEEE
Confidence 578999999998877666655 45 555 55666666665 4677766 33 223333332 27999999
Q ss_pred cCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 229 CTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
++......+.+..++..+ .-+++.-+
T Consensus 69 ~tp~~~h~~~~~~~l~~g--~~v~~EKP 94 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAG--KHVLVEKP 94 (120)
T ss_dssp ESSGGGHHHHHHHHHHTT--SEEEEESS
T ss_pred ecCCcchHHHHHHHHHcC--CEEEEEcC
Confidence 998887778888888774 56666544
No 431
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.73 E-value=0.19 Score=43.40 Aligned_cols=80 Identities=21% Similarity=0.194 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhh-CCCCc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGIT-HGMGV 223 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g~ 223 (335)
++.++||+|+ |.+|..++..+...|+ .|+...++.++.+.+ .+++.. .+ .|-.+ .......+.+.. .-.++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999999988998 898888877766554 334321 12 22222 122222222221 11269
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|.+|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999998873
No 432
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.73 E-value=0.2 Score=45.19 Aligned_cols=96 Identities=13% Similarity=0.056 Sum_probs=57.5
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 232 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~ 232 (335)
+|+|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... -+..............+. ..+|+||-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~---~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL-EDGEITVPVLAADDPAEL---GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc-cCCceeecccCCCChhHc---CCCCEEEEeccc
Confidence 58999999999998888888898 9999998888777776655421 000000000000111111 378999998875
Q ss_pred hHHHHHHHHh----hccCCeEEEEEcc
Q 019822 233 PSLLSEALET----TKVGKGKVIVIGV 255 (335)
Q Consensus 233 ~~~~~~~~~~----l~~~~G~~v~~g~ 255 (335)
.. +..+++. +.++ ..++.+..
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~~n 101 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFLQN 101 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEecC
Confidence 52 3444443 3343 45665544
No 433
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.70 E-value=0.29 Score=43.67 Aligned_cols=93 Identities=19% Similarity=0.250 Sum_probs=64.7
Q ss_pred cccchhhhhHHHHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch
Q 019822 131 LSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208 (335)
Q Consensus 131 l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 208 (335)
+||.....+. +.+..++ -.|++++|+|- ..+|.-++.|+...++ +|++..+. . .
T Consensus 139 ~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~-------------------T---~ 194 (285)
T PRK10792 139 RPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRF-------------------T---K 194 (285)
T ss_pred CCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECC-------------------C---C
Confidence 4554433333 3455554 46999999997 5699999999999999 88888642 1 1
Q ss_pred hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 209 ~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
++.+.++ .+|++|.++|.+..+.. +.++++ ..++++|..
T Consensus 195 ~l~~~~~------~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR------NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh------hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 58999999998865443 678887 889999854
No 434
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.70 E-value=0.27 Score=43.60 Aligned_cols=79 Identities=16% Similarity=0.123 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
+.+++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +..+... . .|-.+ .....+.+++.. -
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 3468999987 9999999998888899 899988877655433 2233321 2 23222 122333333221 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|.+|.+.|.
T Consensus 86 ~-~id~vi~~Ag~ 97 (274)
T PRK07775 86 G-EIEVLVSGAGD 97 (274)
T ss_pred C-CCCEEEECCCc
Confidence 2 68999988864
No 435
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.70 E-value=0.31 Score=42.70 Aligned_cols=105 Identities=17% Similarity=0.195 Sum_probs=67.8
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~ 218 (335)
...+..+.++||-+|.+ +|+.++.+|+.++. .+|+.++.+++..+.+ ++.|...-+.... .+..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~ 148 (247)
T PLN02589 73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMI 148 (247)
T ss_pred HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHH
Confidence 34556677899999974 48888888887642 2899999998877665 4456322222222 34455555543
Q ss_pred C----CCCccEEE-EcCC--ChHHHHHHHHhhccCCeEEEEE
Q 019822 219 H----GMGVDYCF-ECTG--VPSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 219 ~----g~g~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~ 253 (335)
. ...||+|| |+-- ....++.+++.++++ |.++.=
T Consensus 149 ~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~D 189 (247)
T PLN02589 149 EDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYD 189 (247)
T ss_pred hccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEc
Confidence 2 13799998 5542 334677888999997 776543
No 436
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.19 Score=44.39 Aligned_cols=77 Identities=18% Similarity=0.197 Sum_probs=48.5
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-Ee--CCCCCCchhHHHHHHhhhC-CCCc
Q 019822 153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-GMGV 223 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~-g~g~ 223 (335)
++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++.+... ++ |-.+ ..+..+.+.+... ..++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899987 9999999988888999 999999888765543 2233222 22 2222 1223332322211 1269
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|++|++.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999998874
No 437
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.68 E-value=0.31 Score=44.78 Aligned_cols=37 Identities=19% Similarity=0.443 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 187 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~ 187 (335)
.+++|.|+|.|.+|...++.++.+|. +|++.+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999987543
No 438
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=94.67 E-value=0.4 Score=39.97 Aligned_cols=72 Identities=22% Similarity=0.225 Sum_probs=56.3
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC 226 (335)
Q Consensus 147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v 226 (335)
-+.|+++||=+|+|. |.++..|.+..+. +.++++.++++...+.+.|.. |+. .+....+..+.++ .||+|
T Consensus 10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~-sFD~V 79 (193)
T PF07021_consen 10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQ-SFDYV 79 (193)
T ss_pred HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCC-CccEE
Confidence 368999999999875 7777777777888 999999999999999888865 443 3345566666555 89999
Q ss_pred EE
Q 019822 227 FE 228 (335)
Q Consensus 227 id 228 (335)
|-
T Consensus 80 Il 81 (193)
T PF07021_consen 80 IL 81 (193)
T ss_pred eh
Confidence 83
No 439
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.66 E-value=0.18 Score=44.68 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=68.1
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhC
Q 019822 142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~ 219 (335)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++... ..+ .... .++. ..-..
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~---~~~~~ 114 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDIL---KKDFP 114 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCcc---cCCCC
Confidence 44667889999999999864 5566777777788 99999999988888765321 111 0000 1111 01112
Q ss_pred CCCccEEEEc--C---C---ChHHHHHHHHhhccCCeEEEEEccC
Q 019822 220 GMGVDYCFEC--T---G---VPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 220 g~g~d~vid~--~---g---~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
...||+|+.. . + ....++.+.+.|+++ |+++.....
T Consensus 115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 2379999852 1 1 124677888999998 999877543
No 440
>PRK07411 hypothetical protein; Validated
Probab=94.65 E-value=0.11 Score=48.81 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|||+|+|++|..+++.+...|.+++..+|.+.
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 457899999999999999999999999999998554
No 441
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.63 E-value=0.2 Score=47.26 Aligned_cols=74 Identities=23% Similarity=0.316 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC-ceE--eCCCCCCchhHHHHHHhhhCCCCcc
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM-TDF--INPDDEPNKSISELVKGITHGMGVD 224 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga-~~v--~~~~~~~~~~~~~~i~~~~~g~g~d 224 (335)
++++++|+|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+. ... .|-.+ . +.+.+..+ ++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l~--~ID 247 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELLE--KVD 247 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHhC--CCC
Confidence 4689999987 9999999998888999 999999887665432 11111 112 23332 2 22333332 699
Q ss_pred EEEEcCCC
Q 019822 225 YCFECTGV 232 (335)
Q Consensus 225 ~vid~~g~ 232 (335)
++|++.|.
T Consensus 248 iLInnAGi 255 (406)
T PRK07424 248 ILIINHGI 255 (406)
T ss_pred EEEECCCc
Confidence 99987763
No 442
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.14 Score=45.54 Aligned_cols=36 Identities=25% Similarity=0.306 Sum_probs=31.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW 186 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~ 186 (335)
+++++||+|+ |.+|..+++.+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999987 9999999998888999 9999998654
No 443
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.60 E-value=1.1 Score=37.40 Aligned_cols=99 Identities=18% Similarity=0.281 Sum_probs=63.7
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc--eEeCCCCCCchhHHHHHHh
Q 019822 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKG 216 (335)
Q Consensus 143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~ 216 (335)
.....+.++.+||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++.. .++..+. .. .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~------~~---~ 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA------PI---E 93 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc------hh---h
Confidence 3455677889999998864 7777777776543399999999987776643 3322 2222221 11 1
Q ss_pred hhCCCCccEEEEcCC---ChHHHHHHHHhhccCCeEEEEEc
Q 019822 217 ITHGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 217 ~~~g~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
+ . ..+|+|+.... -...+..+.+.|+++ |+++...
T Consensus 94 ~-~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 94 L-P-GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred c-C-cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 1 2 26999985432 123667888999997 9987653
No 444
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.59 E-value=0.23 Score=48.01 Aligned_cols=70 Identities=26% Similarity=0.306 Sum_probs=49.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-----KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
..+++|+|+|+|.+|+.++.+++..|+ +|++++.++. ..+.+++.|......... . . ..++
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~--~~~~ 79 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------L--PEDT 79 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------c--cCCC
Confidence 356789999999999999999999999 8999986542 223456677654433322 1 0 1257
Q ss_pred cEEEEcCCC
Q 019822 224 DYCFECTGV 232 (335)
Q Consensus 224 d~vid~~g~ 232 (335)
|+|+-+.|-
T Consensus 80 D~Vv~s~Gi 88 (480)
T PRK01438 80 DLVVTSPGW 88 (480)
T ss_pred CEEEECCCc
Confidence 888887764
No 445
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=94.55 E-value=0.18 Score=45.83 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=62.4
Q ss_pred HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH---HHhc-CC---ceEeCCCCCCchhHHHH
Q 019822 141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK---GKAF-GM---TDFINPDDEPNKSISEL 213 (335)
Q Consensus 141 ~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~---~~~l-ga---~~v~~~~~~~~~~~~~~ 213 (335)
.+.......++++||-+|+|. |..+..+++. |+..|++++.++.-... ++++ +. .++... +
T Consensus 112 ~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~---- 179 (314)
T TIGR00452 112 RVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------G---- 179 (314)
T ss_pred HHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------C----
Confidence 344455677889999999875 7777776654 66589999988864432 2222 21 112211 1
Q ss_pred HHhhhCCCCccEEEEcC-----CC-hHHHHHHHHhhccCCeEEEEE
Q 019822 214 VKGITHGMGVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 214 i~~~~~g~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 253 (335)
+.++.....||+|+... .. ...+..+.+.|+++ |+++.-
T Consensus 180 ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 22222223799998532 12 24778999999998 998864
No 446
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.55 E-value=0.21 Score=43.14 Aligned_cols=102 Identities=23% Similarity=0.311 Sum_probs=65.3
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHHh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG 216 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~ 216 (335)
....+.++++||=+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+. . .+ .
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~------~-~~-~ 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA------M-EL-P 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech------h-cC-C
Confidence 445677899999999864 6777788887642 389999999888776643 22221 121111 0 00 1
Q ss_pred hhCCCCccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEccC
Q 019822 217 ITHGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 217 ~~~g~g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+ ....+|+|+-+.. ....+..+.+.|+++ |+++.+...
T Consensus 110 ~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~ 153 (231)
T TIGR02752 110 F-DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLETS 153 (231)
T ss_pred C-CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEECC
Confidence 1 2237999975322 123567888999997 999877543
No 447
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.53 E-value=0.4 Score=37.16 Aligned_cols=92 Identities=21% Similarity=0.324 Sum_probs=49.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhh---HHHHHhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 153 SVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWK---KEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 153 ~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~~~~~~~---~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
+|.|+|+ |.+|.++++.+.. -+.+-+-+++++++. .+...-.|.. .+.-+ ..+.+... .+|+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~---------~~l~~~~~--~~DV 70 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT---------DDLEELLE--EADV 70 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB---------S-HHHHTT--H-SE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc---------hhHHHhcc--cCCE
Confidence 5889998 9999999999987 677334455544311 1111111111 01001 12333333 3899
Q ss_pred EEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 226 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
+||++. ++.....++..... |.-+.+|.+.
T Consensus 71 vIDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG 100 (124)
T PF01113_consen 71 VIDFTN-PDAVYDNLEYALKH-GVPLVIGTTG 100 (124)
T ss_dssp EEEES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred EEEcCC-hHHhHHHHHHHHhC-CCCEEEECCC
Confidence 999984 44555555555554 6777777654
No 448
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.53 E-value=0.3 Score=42.16 Aligned_cols=69 Identities=25% Similarity=0.340 Sum_probs=49.9
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822 154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC 229 (335)
Q Consensus 154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~ 229 (335)
|+|+|+ |.+|..+++.+...+. +|.++.|+.. ..+.++..|+..+. |+.+ .+.+.+... |+|.||.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~------~~~l~~al~--g~d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYDD------PESLVAALK--GVDAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT-------HHHHHHHHT--TCSEEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccCC------HHHHHHHHc--CCceEEee
Confidence 789997 9999999999998888 8999998764 34556778886442 2222 334444433 69999988
Q ss_pred CC
Q 019822 230 TG 231 (335)
Q Consensus 230 ~g 231 (335)
++
T Consensus 72 ~~ 73 (233)
T PF05368_consen 72 TP 73 (233)
T ss_dssp SS
T ss_pred cC
Confidence 87
No 449
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.51 E-value=0.29 Score=42.56 Aligned_cols=78 Identities=17% Similarity=0.238 Sum_probs=49.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eE--eCCCCCCchhHHHHHHhhh-CCCC
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DF--INPDDEPNKSISELVKGIT-HGMG 222 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g 222 (335)
+++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+.. .. .|-.+ ..++...+++.. .-.+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 57999987 9999999999888999 99999998877655432 2221 11 23332 123333232221 1125
Q ss_pred ccEEEEcCCC
Q 019822 223 VDYCFECTGV 232 (335)
Q Consensus 223 ~d~vid~~g~ 232 (335)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987753
No 450
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.44 E-value=0.3 Score=48.91 Aligned_cols=78 Identities=21% Similarity=0.266 Sum_probs=58.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 230 (335)
Q Consensus 151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~ 230 (335)
..+|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++ .+. . -.+.+++ .+=..+|.++-++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t-~~~~L~~-agi~~A~~vvv~~ 472 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA---T-RMDLLES-AGAAKAEVLINAI 472 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC---C-CHHHHHh-cCCCcCCEEEEEe
Confidence 3679999999999999999999999 999999999999999988865333 332 1 1122333 3334789999888
Q ss_pred CChHH
Q 019822 231 GVPSL 235 (335)
Q Consensus 231 g~~~~ 235 (335)
+.++.
T Consensus 473 ~d~~~ 477 (621)
T PRK03562 473 DDPQT 477 (621)
T ss_pred CCHHH
Confidence 87643
No 451
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.43 E-value=0.32 Score=43.47 Aligned_cols=79 Identities=20% Similarity=0.217 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-CHHHHH-HHHHHHHcCCCEEEEEcCChhhHHHHH-----hcCC---ceEeCCCCCCchh-HHHHHHhh
Q 019822 149 EKGSSVAVLGL-GTVGLG-AVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGM---TDFINPDDEPNKS-ISELVKGI 217 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~-ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lga---~~v~~~~~~~~~~-~~~~i~~~ 217 (335)
+-+++.+|+|+ .++|.+ +-+||+ .|. +|+.+.|+++|++..+ +.++ ..++|... ++ .-+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence 34689999998 789977 556666 999 8999999999998763 2342 13566655 33 24556665
Q ss_pred hCCCCccEEEEcCCC
Q 019822 218 THGMGVDYCFECTGV 232 (335)
Q Consensus 218 ~~g~g~d~vid~~g~ 232 (335)
+.+-.+-+.+|++|-
T Consensus 122 l~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGM 136 (312)
T ss_pred hcCCceEEEEecccc
Confidence 566578888999884
No 452
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.42 E-value=0.17 Score=46.75 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC----CceE-eCCCCCCchhHHHHHHhhhCCCC
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----a~~v-~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
++.+|||+|+ |.+|..+++.+...|. +|+++++++...... +.++ ...+ .|-.+ . +.++++....+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~---~~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---A---AKLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---H---HHHHHHHhhcC
Confidence 4688999987 9999999999999999 999998776543221 2221 1111 12222 1 22333333336
Q ss_pred ccEEEEcCC
Q 019822 223 VDYCFECTG 231 (335)
Q Consensus 223 ~d~vid~~g 231 (335)
+|+||++.+
T Consensus 76 ~d~vih~A~ 84 (349)
T TIGR02622 76 PEIVFHLAA 84 (349)
T ss_pred CCEEEECCc
Confidence 899999886
No 453
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.42 E-value=0.68 Score=40.16 Aligned_cols=105 Identities=16% Similarity=0.098 Sum_probs=59.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHH----HHHhcCCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKE----KGKAFGMT-DF--INPDDEPNKSISELVKGITH- 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~----~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~- 219 (335)
.++++||+|+ |.+|..++.-+...|+ +|+.+.++ .++.. .+++.+.. .. .|..+ ..+....+++...
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence 3578999987 9999999998888999 77666533 22222 22333322 12 23322 1222222222211
Q ss_pred CCCccEEEEcCCC----------hH---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822 220 GMGVDYCFECTGV----------PS---------------LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 220 g~g~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
-.++|.+|.+.|. .+ ..+.+.+.+... |+++.++....
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~ 144 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG 144 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence 1268999998873 10 122334455665 88988876544
No 454
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.36 E-value=1.9 Score=37.65 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=64.1
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMG 222 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g 222 (335)
+.....+..+||-+|+|+ |..+..+++ .|. +|++++.+++..+.+++... ...+..+. .. + .+ ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~----~-~~-~~~~ 103 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ES----L-PL-ATAT 103 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---cc----C-cC-CCCc
Confidence 334445678899999875 666666654 577 99999999999888876542 12221111 00 0 11 2236
Q ss_pred ccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEccC
Q 019822 223 VDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 223 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
+|+|+.... -...+..+.+.|+++ |.++.....
T Consensus 104 fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~ 142 (251)
T PRK10258 104 FDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV 142 (251)
T ss_pred EEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 999986432 124678889999998 998877543
No 455
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.34 E-value=0.62 Score=41.81 Aligned_cols=39 Identities=26% Similarity=0.269 Sum_probs=34.1
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
.+|.|+|+|.+|...++.+...|. +|+.++.++++.+.+
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKA 42 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 579999999999999998888898 999999998876655
No 456
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=94.33 E-value=0.61 Score=42.09 Aligned_cols=43 Identities=23% Similarity=0.326 Sum_probs=37.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga 196 (335)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~ 45 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGA 45 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCC
Confidence 68889999999988888888898 99999999999888776664
No 457
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.32 E-value=0.22 Score=44.54 Aligned_cols=73 Identities=21% Similarity=0.188 Sum_probs=45.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCceE--------eCCCCCCchhHHHHHHhhhC
Q 019822 154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMTDF--------INPDDEPNKSISELVKGITH 219 (335)
Q Consensus 154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~~v--------~~~~~~~~~~~~~~i~~~~~ 219 (335)
|||+|+ |.+|..+++-+...+.++++.+++++.++-.+ +++ ....+ -|.. -.+.+.+...
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr------d~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR------DKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC------HHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc------CHHHHHHHHh
Confidence 799986 99999999988888887999999999887665 334 11111 1222 2345566666
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
..++|+||.+..-
T Consensus 75 ~~~pdiVfHaAA~ 87 (293)
T PF02719_consen 75 EYKPDIVFHAAAL 87 (293)
T ss_dssp --T-SEEEE----
T ss_pred hcCCCEEEEChhc
Confidence 5689999997754
No 458
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.41 Score=42.88 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=30.4
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
.+++++||+|+ +++|.+.++.+...|+ +|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 45789999987 9999999998888999 888887653
No 459
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.31 E-value=0.25 Score=44.85 Aligned_cols=98 Identities=10% Similarity=0.096 Sum_probs=58.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceEeCCCCCCchhHHHHHHhh--hCCCCccEEEEc
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGI--THGMGVDYCFEC 229 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~--~~g~g~d~vid~ 229 (335)
+|+|+|+|++|...+-.+...|. +|..+++++++.+..++- |.. +.+... . ..-.+... .....+|+||-|
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~---~-~~~~~~~~~~~~~~~~D~viv~ 77 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ---A-SLYAIPAETADAAEPIHRLLLA 77 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc---c-eeeccCCCCcccccccCEEEEE
Confidence 69999999999987777777898 999999987777766543 421 211111 0 00000000 011268999988
Q ss_pred CCCh---HHHHHHHHhhccCCeEEEEEccCC
Q 019822 230 TGVP---SLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 230 ~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
+=+. +.+..+...+.++ ..++.+.+..
T Consensus 78 vK~~~~~~al~~l~~~l~~~-t~vv~lQNGv 107 (305)
T PRK05708 78 CKAYDAEPAVASLAHRLAPG-AELLLLQNGL 107 (305)
T ss_pred CCHHhHHHHHHHHHhhCCCC-CEEEEEeCCC
Confidence 7543 2334444555665 6676665443
No 460
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.27 Score=43.10 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=32.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK 187 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~ 187 (335)
+++++||+|+ |.+|..+++.+...|+ +|+++++++.+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~ 45 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPD 45 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhh
Confidence 5789999987 9999999999988999 99999987543
No 461
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.26 E-value=0.45 Score=44.35 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~ 184 (335)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999999899999865
No 462
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.26 E-value=0.42 Score=43.45 Aligned_cols=36 Identities=14% Similarity=0.264 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~ 186 (335)
.+++|.|+|.|.+|...++.++.+|. +|++.+++.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 9999987553
No 463
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.25 E-value=0.35 Score=42.54 Aligned_cols=104 Identities=18% Similarity=0.197 Sum_probs=60.4
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh------hhHHHHHhcCC-ceE--eCCCCCCchhHHHHHHhh
Q 019822 150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP------WKKEKGKAFGM-TDF--INPDDEPNKSISELVKGI 217 (335)
Q Consensus 150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~------~~~~~~~~lga-~~v--~~~~~~~~~~~~~~i~~~ 217 (335)
.++++||+|+ +++|.+++..+...|+ +|+.+.++. +..+.+++.+. ... .|-.+ +....+.+++.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence 4688999985 4899999999988999 888775432 22222322221 112 23322 12333333332
Q ss_pred h--CCCCccEEEEcCCCh-------H----------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822 218 T--HGMGVDYCFECTGVP-------S----------------------LLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 218 ~--~g~g~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
. .+ ++|+++++.|.. . ..+.+++.+..+ |+++.++...+
T Consensus 82 ~~~~g-~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~~ 151 (258)
T PRK07370 82 KQKWG-KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLGG 151 (258)
T ss_pred HHHcC-CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence 2 13 699999988731 0 123455566666 89888876443
No 464
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.23 E-value=0.46 Score=42.95 Aligned_cols=43 Identities=26% Similarity=0.401 Sum_probs=36.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga 196 (335)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA 44 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence 58889999999988888877898 99999999998887777664
No 465
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.22 E-value=0.4 Score=44.48 Aligned_cols=36 Identities=31% Similarity=0.315 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|||+|+|++|..++..+...|.+++..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457899999999999999999999999999998654
No 466
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.20 E-value=0.19 Score=49.16 Aligned_cols=45 Identities=24% Similarity=0.398 Sum_probs=37.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG 195 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg 195 (335)
.++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+ ++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~ 423 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVG 423 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhC
Confidence 46789999999999999999999999 999999988776665 4454
No 467
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.16 E-value=0.25 Score=42.93 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~-~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~-- 218 (335)
+++++||+|+ |.+|..++..+...|+ +|+. ..++.++.+.+ ++.+... . .|-.+ +.+....+++..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4578999987 9999999999999999 7765 46666554332 3334321 2 23222 133333333321
Q ss_pred CCCCccEEEEcCCC
Q 019822 219 HGMGVDYCFECTGV 232 (335)
Q Consensus 219 ~g~g~d~vid~~g~ 232 (335)
.+ ++|++|++.|.
T Consensus 80 ~~-~id~vi~~ag~ 92 (250)
T PRK08063 80 FG-RLDVFVNNAAS 92 (250)
T ss_pred cC-CCCEEEECCCC
Confidence 12 68999998763
No 468
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.15 E-value=0.4 Score=41.92 Aligned_cols=80 Identities=14% Similarity=0.144 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhC-CCCccE
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g~d~ 225 (335)
.++++||+|+ |.+|.+.++.+...|+ +|+.+.++ ++..+.+++.+... ..|-.+ .....+.+++... -.++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4678999987 9999999999988999 88776543 33444444434322 223332 1233333333211 126899
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 469
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.14 E-value=0.86 Score=38.85 Aligned_cols=118 Identities=14% Similarity=0.098 Sum_probs=68.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
.+++|||+|+|.+|.-=+.++...|+ +|+++..+- .++..+.+.+-...+. +. +... .+ .++++||-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~~--~~---~~~~lvia 78 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDAE--DL---DDAFLVIA 78 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cChh--hh---cCceEEEE
Confidence 57899999999999999999999999 888887655 3333333322211111 11 1111 11 14899999
Q ss_pred cCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHh-hcCcEEEEeecc
Q 019822 229 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA-CGGRTLKGTTFG 281 (335)
Q Consensus 229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 281 (335)
+++.+..-+.+....... +.++-+-+... ..++....+. ...+.+.-++.|
T Consensus 79 At~d~~ln~~i~~~a~~~-~i~vNv~D~p~-~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 79 ATDDEELNERIAKAARER-RILVNVVDDPE-LCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred eCCCHHHHHHHHHHHHHh-CCceeccCCcc-cCceecceeeccCCeEEEEECCC
Confidence 999885555666666665 66555544332 1222222222 344555555444
No 470
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.4 Score=41.80 Aligned_cols=80 Identities=16% Similarity=0.220 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH-Hhc---CCc-eEe--CCCCCCchhHHHHHHhhh--
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG-KAF---GMT-DFI--NPDDEPNKSISELVKGIT-- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~-~~l---ga~-~v~--~~~~~~~~~~~~~i~~~~-- 218 (335)
.+.+++|+|+ |.+|..+++.+...|+ +|++. .++.++.+.+ +++ +.. .++ |-.+ ..++...+++..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~ 81 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNE 81 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHH
Confidence 3578999987 9999999998888899 77664 6666554332 222 221 122 3332 233333333322
Q ss_pred -----CCCCccEEEEcCCC
Q 019822 219 -----HGMGVDYCFECTGV 232 (335)
Q Consensus 219 -----~g~g~d~vid~~g~ 232 (335)
+..++|++|.+.|.
T Consensus 82 ~~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGI 100 (254)
T ss_pred hccccCCCCccEEEECCCC
Confidence 11368999988864
No 471
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.11 E-value=0.9 Score=43.14 Aligned_cols=74 Identities=22% Similarity=0.314 Sum_probs=51.6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh---------hCCCC
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI---------THGMG 222 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~---------~~g~g 222 (335)
.+|.|+|.|-+|...+..+...|. +|+++++++++.+.++. |... ..+ ++..+.+++. +.-++
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~---~~e---~~l~~~l~~~~~~g~l~~~~~~~~ 75 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIH---IVE---PDLDMVVKTAVEGGYLRATTTPEP 75 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCC---cCC---CCHHHHHHHHhhcCceeeeccccc
Confidence 578999999999998888888898 99999999999887643 3221 122 3333333221 11226
Q ss_pred ccEEEEcCCCh
Q 019822 223 VDYCFECTGVP 233 (335)
Q Consensus 223 ~d~vid~~g~~ 233 (335)
.|++|-|++.+
T Consensus 76 aDvvii~vptp 86 (415)
T PRK11064 76 ADAFLIAVPTP 86 (415)
T ss_pred CCEEEEEcCCC
Confidence 89999999874
No 472
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.10 E-value=0.53 Score=42.58 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHH----HHhcCCceE-e--CCCCCCchhHHHHHHhhh-C
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEK----GKAFGMTDF-I--NPDDEPNKSISELVKGIT-H 219 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~----~~~lga~~v-~--~~~~~~~~~~~~~i~~~~-~ 219 (335)
.++++||+|+ +++|.+.++.+...|+ +|++.+++. ++.+. +++.|.... + |-.+ .....+.+++.. -
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d--~~~~~~~~~~~~~~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ--RATADELVATAVGL 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHh
Confidence 5678999987 9999999998888999 888887643 22222 233343221 1 2222 122222222211 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ ++|++|++.|.
T Consensus 88 g-~iD~li~nAG~ 99 (306)
T PRK07792 88 G-GLDIVVNNAGI 99 (306)
T ss_pred C-CCCEEEECCCC
Confidence 3 69999998874
No 473
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.08 E-value=0.31 Score=43.33 Aligned_cols=80 Identities=23% Similarity=0.224 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHhcC-C-ceEeCCCCCCchh---HHHHHHhh
Q 019822 148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE----KGKAFG-M-TDFINPDDEPNKS---ISELVKGI 217 (335)
Q Consensus 148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~----~~~~lg-a-~~v~~~~~~~~~~---~~~~i~~~ 217 (335)
.-.|+.|||+|+ +++|.+.++=+..+|+ +++.++.+++..+ .+++.| + ..+.|-.+ .++ .++.+++.
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKE 111 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence 346899999986 8999998877777898 8888887765433 334445 2 23444322 133 34444444
Q ss_pred hCCCCccEEEEcCCC
Q 019822 218 THGMGVDYCFECTGV 232 (335)
Q Consensus 218 ~~g~g~d~vid~~g~ 232 (335)
. | .+|+++|..|-
T Consensus 112 ~-G-~V~ILVNNAGI 124 (300)
T KOG1201|consen 112 V-G-DVDILVNNAGI 124 (300)
T ss_pred c-C-CceEEEecccc
Confidence 3 3 79999998873
No 474
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.08 E-value=0.27 Score=42.53 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=48.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHHH----hcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKGK----AFGMT-DFI--NPDDEPNKSISELVKGITH-G 220 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g 220 (335)
++++||+|+ |.+|..++..+...|+ +|+.+ .++.++.+.+. ..+.. .++ |-.+ +....+.+.+... -
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF 81 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 468999987 9999999988888899 88888 88776654432 22221 122 3222 1222222222211 1
Q ss_pred CCccEEEEcCCC
Q 019822 221 MGVDYCFECTGV 232 (335)
Q Consensus 221 ~g~d~vid~~g~ 232 (335)
.++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (247)
T PRK05565 82 GKIDILVNNAGI 93 (247)
T ss_pred CCCCEEEECCCc
Confidence 169999987764
No 475
>PRK04266 fibrillarin; Provisional
Probab=94.07 E-value=0.97 Score=39.05 Aligned_cols=102 Identities=19% Similarity=0.174 Sum_probs=62.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhhC
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~ 219 (335)
+...++++++||=+|+|+ |..+..+++..+..+|++++.+++..+.+.+. ..-..+..+. ... .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence 457889999999998764 55666677766534899999999876654222 1111221121 110 000111 1
Q ss_pred CCCccEEEEcCCCh----HHHHHHHHhhccCCeEEEEE
Q 019822 220 GMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI 253 (335)
Q Consensus 220 g~g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~ 253 (335)
. .+|+|+.-...+ ..+..+.+.|+++ |+++..
T Consensus 140 ~-~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 E-KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred c-cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2 599999544332 1367888899998 998874
No 476
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.44 Score=40.60 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=46.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCC-CCccEEEE
Q 019822 152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHG-MGVDYCFE 228 (335)
Q Consensus 152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g-~g~d~vid 228 (335)
.++||+|+ |.+|..++..+... + +|++++++.++.+.+.+ ....+++..+- .+ .+.+++.... .++|.+|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence 57999987 99999988877666 7 89999998877655542 21122222221 11 1223332221 26999999
Q ss_pred cCCC
Q 019822 229 CTGV 232 (335)
Q Consensus 229 ~~g~ 232 (335)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 8874
No 477
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.06 E-value=0.38 Score=48.00 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=65.2
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 231 (335)
Q Consensus 152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g 231 (335)
.+|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++ .+. .-.+.+++ .+=+++|.++-+++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~-agi~~A~~vv~~~~ 473 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA----TQLELLRA-AGAEKAEAIVITCN 473 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC----CCHHHHHh-cCCccCCEEEEEeC
Confidence 578999999999999999999999 999999999999999998865433 222 11222333 33447899999988
Q ss_pred ChHHHHHH---HHhhccCCeEEEEE
Q 019822 232 VPSLLSEA---LETTKVGKGKVIVI 253 (335)
Q Consensus 232 ~~~~~~~~---~~~l~~~~G~~v~~ 253 (335)
.+..-..+ .+...++ -+++.-
T Consensus 474 d~~~n~~i~~~~r~~~p~-~~IiaR 497 (601)
T PRK03659 474 EPEDTMKIVELCQQHFPH-LHILAR 497 (601)
T ss_pred CHHHHHHHHHHHHHHCCC-CeEEEE
Confidence 76432233 3344454 455443
No 478
>PRK12743 oxidoreductase; Provisional
Probab=94.05 E-value=0.31 Score=42.67 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=47.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822 151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEK----GKAFGMT-DF--INPDDEPNKSISELVKGIT--H 219 (335)
Q Consensus 151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~----~~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~ 219 (335)
++++||+|+ +.+|..+++.+...|+ +|+.+.+ +.++.+. ++..+.. +. .|-.+ .......+.+.. -
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999987 9999999999999999 8877753 4443332 2334432 22 23322 122222222221 1
Q ss_pred CCCccEEEEcCCC
Q 019822 220 GMGVDYCFECTGV 232 (335)
Q Consensus 220 g~g~d~vid~~g~ 232 (335)
+ .+|.+|.+.|.
T Consensus 79 ~-~id~li~~ag~ 90 (256)
T PRK12743 79 G-RIDVLVNNAGA 90 (256)
T ss_pred C-CCCEEEECCCC
Confidence 2 68999988763
No 479
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.03 E-value=0.21 Score=47.04 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+|||+|+|++|..++..+...|.+++..+|.+.
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ 76 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDV 76 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence 457899999999999999999999998999888543
No 480
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.02 E-value=0.17 Score=42.09 Aligned_cols=38 Identities=32% Similarity=0.416 Sum_probs=32.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~ 191 (335)
+|.|+|+|.+|...+.++...|. +|...+.+++.++.+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence 58899999999999999998999 999999999877654
No 481
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.01 E-value=0.68 Score=44.14 Aligned_cols=104 Identities=13% Similarity=0.199 Sum_probs=65.5
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKG 216 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~ 216 (335)
......++++||=+|+|+ |..++.+++.++..+|++++.++++.+.+ +++|.. .+ .+.+. ... ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~~ 303 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----SQ 303 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----cc
Confidence 445678899999998754 55556666666533999999999987765 445654 22 22221 100 00
Q ss_pred hhCCCCccEEE-E--cCCC-------------------------hHHHHHHHHhhccCCeEEEEEccC
Q 019822 217 ITHGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 217 ~~~g~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
......||.|+ | |+|. ...+..+++.|+++ |+++..-..
T Consensus 304 ~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs 370 (426)
T TIGR00563 304 WAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS 370 (426)
T ss_pred cccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 11223699987 4 4542 23667788899997 998866443
No 482
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=93.98 E-value=0.11 Score=46.57 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMGV 223 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~ 223 (335)
.++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++ .+.. .+...+ ... . .+ ...+
T Consensus 119 ~~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~D------~~~-~-~~--~~~f 185 (287)
T PRK12335 119 VKPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGLYD------INS-A-SI--QEEY 185 (287)
T ss_pred cCCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEEec------hhc-c-cc--cCCc
Confidence 3455899999864 666666666 477 99999999987776643 2321 111111 100 0 11 2379
Q ss_pred cEEEEcCC--------ChHHHHHHHHhhccCCeEEEEEc
Q 019822 224 DYCFECTG--------VPSLLSEALETTKVGKGKVIVIG 254 (335)
Q Consensus 224 d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~g 254 (335)
|+|+.+.- -...+..+.+.|+++ |.++.+.
T Consensus 186 D~I~~~~vl~~l~~~~~~~~l~~~~~~Lkpg-G~~l~v~ 223 (287)
T PRK12335 186 DFILSTVVLMFLNRERIPAIIKNMQEHTNPG-GYNLIVC 223 (287)
T ss_pred cEEEEcchhhhCCHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 99986532 123567888889997 9866554
No 483
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.97 E-value=0.59 Score=41.02 Aligned_cols=78 Identities=22% Similarity=0.243 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-Hh----cCCc-eE--eCCCCCCchhHHHHHHhhh-
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG-KA----FGMT-DF--INPDDEPNKSISELVKGIT- 218 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~-~~----lga~-~v--~~~~~~~~~~~~~~i~~~~- 218 (335)
+++++||+|+ +++|.+++..+...|+ +|+.+.+ ++++.+.+ ++ .+.. .. .|-.+ +.+..+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 5789999987 9999999999989999 8887754 44443332 22 2321 12 23332 233333333322
Q ss_pred -CCCCccEEEEcCC
Q 019822 219 -HGMGVDYCFECTG 231 (335)
Q Consensus 219 -~g~g~d~vid~~g 231 (335)
-+ ++|+++++.|
T Consensus 84 ~~g-~id~lv~nAg 96 (260)
T PRK08416 84 DFD-RVDFFISNAI 96 (260)
T ss_pred hcC-CccEEEECcc
Confidence 13 6899998775
No 484
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.97 E-value=0.62 Score=41.88 Aligned_cols=93 Identities=16% Similarity=0.207 Sum_probs=64.3
Q ss_pred cccchhhhhHHHHHhcCC-CCCCEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHhcCCceEeCCCCCCc
Q 019822 131 LSCGFTTGYGAAWKEAKV-EKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKAFGMTDFINPDDEPN 207 (335)
Q Consensus 131 l~~~~~ta~~~l~~~~~~-~~~~~VlI~G-~g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~lga~~v~~~~~~~~ 207 (335)
+||.....+. +.+..++ -.|++|+|+| .+.+|...+.++...|+ .|++.. +++
T Consensus 138 ~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------- 193 (296)
T PRK14188 138 VPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------- 193 (296)
T ss_pred cCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC----------------------
Confidence 4544333333 3344443 5799999999 59999999999999999 999885 332
Q ss_pred hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
+..+.+ +..|+|+-++|.+..+...+ +.++ ..++++|...
T Consensus 194 -~l~e~~------~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 -DLPAVC------RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred -CHHHHH------hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 111111 15799999999987666554 7886 8888988653
No 485
>PRK12937 short chain dehydrogenase; Provisional
Probab=93.95 E-value=0.4 Score=41.42 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=29.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~ 39 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGS 39 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCC
Confidence 5678999987 9999999999999999 777776543
No 486
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.94 E-value=0.55 Score=41.90 Aligned_cols=84 Identities=18% Similarity=0.273 Sum_probs=60.6
Q ss_pred HHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822 142 AWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 142 l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~ 219 (335)
+.+..++ -.|++|+|+|. ..+|.-++.++...|+ +|+...+. . .++.+.++
T Consensus 148 lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t---~~l~~~~~---- 200 (285)
T PRK14189 148 MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T---RDLAAHTR---- 200 (285)
T ss_pred HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C---CCHHHHhh----
Confidence 3454553 47899999997 5669999999999999 88876421 1 22322232
Q ss_pred CCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 220 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 220 g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
..|+|+-++|.+..+.. +.++++ ..++.+|...
T Consensus 201 --~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin~ 233 (285)
T PRK14189 201 --QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR 233 (285)
T ss_pred --hCCEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence 58999999998865443 778897 8999998653
No 487
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=93.94 E-value=1 Score=40.61 Aligned_cols=43 Identities=23% Similarity=0.481 Sum_probs=36.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga 196 (335)
+|-++|.|.+|...+.-+...|. +|++.++++++.+.+++.|+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence 57888999999988888878898 89999999988888877774
No 488
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.91 E-value=0.23 Score=44.61 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~ 186 (335)
+++++||+|+|+.+.+++..+...|+++++++.|+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5679999999888988777777789889999999853
No 489
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.91 E-value=0.32 Score=46.64 Aligned_cols=70 Identities=29% Similarity=0.373 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhH----HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKK----EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 224 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~-~~~----~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d 224 (335)
.+++|+|+|+|.+|+.++..+...|+ +|++++.+. +.. +.+.+.|.. ++..+. .+ +.. + ++|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~------~~~-~-~~d 70 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY---PE------EFL-E-GVD 70 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc---ch------hHh-h-cCC
Confidence 46889999998899999999999999 999999764 222 334455654 332222 11 111 2 689
Q ss_pred EEEEcCCC
Q 019822 225 YCFECTGV 232 (335)
Q Consensus 225 ~vid~~g~ 232 (335)
+|+.+.|.
T Consensus 71 ~vv~~~g~ 78 (450)
T PRK14106 71 LVVVSPGV 78 (450)
T ss_pred EEEECCCC
Confidence 99988874
No 490
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.90 E-value=0.36 Score=41.63 Aligned_cols=106 Identities=21% Similarity=0.200 Sum_probs=65.9
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCc----eEeCCCCCCchhHHHHHHhhh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMT----DFINPDDEPNKSISELVKGIT 218 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~----~v~~~~~~~~~~~~~~i~~~~ 218 (335)
......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.. ..+.... .++... ..
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~---~~ 117 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ---GDAEAL---PF 117 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe---cccccC---CC
Confidence 344556788999999876 888888888775 23999999998887777553211 1011110 111110 01
Q ss_pred CCCCccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 219 HGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 219 ~g~g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
....+|+|+.... ....+..+.+.|+++ |+++.+....
T Consensus 118 ~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~~ 161 (239)
T PRK00216 118 PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFSK 161 (239)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEecC
Confidence 2236899874321 234677888999998 9998876543
No 491
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.88 E-value=0.89 Score=36.08 Aligned_cols=84 Identities=23% Similarity=0.200 Sum_probs=59.1
Q ss_pred HHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822 142 AWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH 219 (335)
Q Consensus 142 l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~ 219 (335)
+.+..++ -.|++|+|+|- ..+|.-++.++...|+ +|..+++... +..+.++
T Consensus 18 ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~----------------------~l~~~v~---- 70 (140)
T cd05212 18 LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI----------------------QLQSKVH---- 70 (140)
T ss_pred HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc----------------------CHHHHHh----
Confidence 3344443 47899999996 8999999999999999 8888874321 1222222
Q ss_pred CCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822 220 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257 (335)
Q Consensus 220 g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 257 (335)
.+|+|+.++|.+..+. -+.++++ ..++.+|...
T Consensus 71 --~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 71 --DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred --hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 5899999999875444 4558886 7888776543
No 492
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=93.88 E-value=0.39 Score=46.44 Aligned_cols=70 Identities=13% Similarity=0.179 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
.+.+++|+|+|++|.+++..+...|+ +|+++++++++.+.+ ++++.. .++..+ +.++ ..+|+|++
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~-~V~i~~R~~~~~~~la~~~~~~-~~~~~~---------~~~l---~~~DiVIn 396 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGA-ELLIFNRTKAHAEALASRCQGK-AFPLES---------LPEL---HRIDIIIN 396 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccc-eechhH---------hccc---CCCCEEEE
Confidence 56789999999999999999999999 999999888776654 333321 221111 1111 26899999
Q ss_pred cCCCh
Q 019822 229 CTGVP 233 (335)
Q Consensus 229 ~~g~~ 233 (335)
|++..
T Consensus 397 atP~g 401 (477)
T PRK09310 397 CLPPS 401 (477)
T ss_pred cCCCC
Confidence 98754
No 493
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.88 E-value=0.41 Score=45.85 Aligned_cols=71 Identities=20% Similarity=0.278 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~----~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~ 225 (335)
.+++++|+|.|.+|.+++.+++..|+ +|++.+.+... .+.+++.|.......+. .+. + . +++|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~----~-~~~d~ 71 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L----D-EDFDL 71 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h----c-CcCCE
Confidence 46789999998899999999999999 99999865422 23345566543322222 111 1 1 14899
Q ss_pred EEEcCCC
Q 019822 226 CFECTGV 232 (335)
Q Consensus 226 vid~~g~ 232 (335)
|+.+.|-
T Consensus 72 vV~s~gi 78 (447)
T PRK02472 72 MVKNPGI 78 (447)
T ss_pred EEECCCC
Confidence 9887754
No 494
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.83 E-value=0.62 Score=44.53 Aligned_cols=43 Identities=23% Similarity=0.400 Sum_probs=35.6
Q ss_pred EEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCC
Q 019822 153 SVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGM 196 (335)
Q Consensus 153 ~VlI~G-~g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga 196 (335)
+|.|+| .|.+|.+.+..++..|. +|+++++++++. +.++++|+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCC
Confidence 588997 59999999999999998 999999888774 55566665
No 495
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.81 E-value=1.1 Score=42.76 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=64.8
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHHh
Q 019822 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG 216 (335)
Q Consensus 144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~ 216 (335)
......++++||=+|+|+ |..+++++..++ ..+|++++.++++.+.++ ++|.+. ++..+. .. +.+
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~----l~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ER----LTE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hh----hhh
Confidence 345678899999888754 556666777662 239999999999987764 456543 222221 11 111
Q ss_pred hhCCCCccEEE-E--cCCCh-------------------------HHHHHHHHhhccCCeEEEEEccC
Q 019822 217 ITHGMGVDYCF-E--CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG 256 (335)
Q Consensus 217 ~~~g~g~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 256 (335)
...+ .||.|+ | |+|.. ..+..+++.++++ |+++..-..
T Consensus 303 ~~~~-~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 303 YVQD-TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred hhhc-cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 2223 699997 4 44331 1366788899997 987665443
No 496
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.80 E-value=1.2 Score=36.12 Aligned_cols=81 Identities=28% Similarity=0.291 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 228 (335)
Q Consensus 150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid 228 (335)
++++|.|+|-|.-|.+.++-+|-.|. +|++..+... ..+.+++-|.. + .+..+.++ ..|+|+-
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v--------~~~~eAv~------~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V--------MSVAEAVK------KADVVML 66 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C--------CEHHHHHH------C-SEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e--------ccHHHHHh------hCCEEEE
Confidence 57899999999999999999999999 8887777666 77788888864 2 22444444 5799998
Q ss_pred cCCCh---HHH-HHHHHhhccC
Q 019822 229 CTGVP---SLL-SEALETTKVG 246 (335)
Q Consensus 229 ~~g~~---~~~-~~~~~~l~~~ 246 (335)
.+... +.+ +.+...|+++
T Consensus 67 L~PD~~q~~vy~~~I~p~l~~G 88 (165)
T PF07991_consen 67 LLPDEVQPEVYEEEIAPNLKPG 88 (165)
T ss_dssp -S-HHHHHHHHHHHHHHHS-TT
T ss_pred eCChHHHHHHHHHHHHhhCCCC
Confidence 87643 233 4555677775
No 497
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=93.78 E-value=1.4 Score=38.79 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019822 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK 183 (335)
Q Consensus 149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~ 183 (335)
-++.+|+|.|.|.+|+.+++++..+|+ +|++++.
T Consensus 36 l~g~~vaIqGfGnVG~~~a~~L~e~Ga-kvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGSGNVAQYAAEKLLELGA-KVVTLSD 69 (254)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 467899999999999999999999999 8887753
No 498
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.76 E-value=0.35 Score=43.40 Aligned_cols=38 Identities=18% Similarity=0.095 Sum_probs=31.8
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822 147 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP 185 (335)
Q Consensus 147 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~ 185 (335)
...+++++||+|+ |.+|..++..+...|+ +|+.+.++.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~ 80 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDE 80 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 3445789999987 9999999998888899 898888764
No 499
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=93.75 E-value=0.69 Score=41.50 Aligned_cols=107 Identities=13% Similarity=0.078 Sum_probs=71.6
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc---C-C-ceEeCCCCCCchh---HHHHHHhhhC
Q 019822 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF---G-M-TDFINPDDEPNKS---ISELVKGITH 219 (335)
Q Consensus 149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l---g-a-~~v~~~~~~~~~~---~~~~i~~~~~ 219 (335)
.+++.|||+|+ ++.|..++.-+...|. .|++.+-.++..+.++.. + . +-.+|-.+ +++ ..+.+++..+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~--~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK--PESVKEAAQWVKKHLG 103 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC--HHHHHHHHHHHHHhcc
Confidence 45677999998 9999999999999999 999999777765655332 1 1 11234332 122 3445556666
Q ss_pred CCCccEEEEcCCCh--------------------------HHHHHHHHhhccCCeEEEEEccCCC
Q 019822 220 GMGVDYCFECTGVP--------------------------SLLSEALETTKVGKGKVIVIGVGVD 258 (335)
Q Consensus 220 g~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~ 258 (335)
..+.--++|+.|-. ......+..+++..||+|-++...+
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 66788888888721 1223445566655599999987776
No 500
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=93.73 E-value=0.43 Score=42.58 Aligned_cols=132 Identities=23% Similarity=0.301 Sum_probs=85.8
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC--------chhHHHHHHhh
Q 019822 146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP--------NKSISELVKGI 217 (335)
Q Consensus 146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~--------~~~~~~~i~~~ 217 (335)
++..++..+|++|.|..|++++..++..|+ -|...+-...+.+..+.+|++-+--.+++. +.+|.+.-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 345677889999999999999999999999 888888888887777777754321111111 23443333332
Q ss_pred h--CCCCccEEEEcC---CC--hHH-HHHHHHhhccCCeEEEEEccCCCccccch--hHHHhhcCcEEEEee
Q 019822 218 T--HGMGVDYCFECT---GV--PSL-LSEALETTKVGKGKVIVIGVGVDAMVPLN--VIALACGGRTLKGTT 279 (335)
Q Consensus 218 ~--~g~g~d~vid~~---g~--~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~~~~g~~ 279 (335)
. .-+++|+||-+. |. |.+ .......++++ ..+|++....+...+.. -.-....+++|.|..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 2 224799999765 22 222 34677889997 99999976555222222 122344678888765
Done!