Query 019825
Match_columns 335
No_of_seqs 155 out of 1927
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 04:50:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019825.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019825hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 2.1E-33 4.6E-38 262.9 28.0 279 14-303 39-335 (358)
2 PRK11272 putative DMT superfam 100.0 5.8E-30 1.3E-34 235.1 27.3 260 4-299 23-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 5.3E-29 1.1E-33 229.5 27.2 262 4-299 19-290 (299)
4 PRK11689 aromatic amino acid e 100.0 1.5E-28 3.3E-33 225.9 24.4 265 4-299 19-290 (295)
5 TIGR00950 2A78 Carboxylate/Ami 100.0 5.9E-28 1.3E-32 217.9 27.3 249 5-291 5-259 (260)
6 TIGR00817 tpt Tpt phosphate/ph 100.0 3.4E-28 7.4E-33 224.5 22.9 257 9-299 22-296 (302)
7 PRK10532 threonine and homoser 100.0 2.6E-27 5.5E-32 217.6 25.6 254 5-300 28-285 (293)
8 PRK15430 putative chlorampheni 99.9 1.2E-25 2.7E-30 206.7 23.5 249 7-297 26-286 (296)
9 PTZ00343 triose or hexose phos 99.9 2.9E-25 6.2E-30 208.5 23.1 257 7-297 67-349 (350)
10 PF06027 DUF914: Eukaryotic pr 99.9 2.1E-24 4.5E-29 198.6 24.6 265 14-305 41-314 (334)
11 TIGR03340 phn_DUF6 phosphonate 99.9 4.2E-24 9.2E-29 195.2 22.8 218 40-293 59-280 (281)
12 COG0697 RhaT Permeases of the 99.9 4E-21 8.7E-26 175.2 25.1 255 7-297 25-288 (292)
13 TIGR00688 rarD rarD protein. T 99.9 5E-21 1.1E-25 172.6 23.6 222 7-271 20-255 (256)
14 COG5006 rhtA Threonine/homoser 99.9 2.8E-20 6.1E-25 159.7 21.7 255 7-302 30-288 (292)
15 KOG4510 Permease of the drug/m 99.9 8E-24 1.7E-28 182.6 -0.1 270 4-299 52-328 (346)
16 PF08449 UAA: UAA transporter 99.8 2.9E-18 6.2E-23 158.3 22.4 262 16-301 31-302 (303)
17 COG2962 RarD Predicted permeas 99.8 4E-18 8.8E-23 150.2 21.2 252 7-299 24-286 (293)
18 KOG2765 Predicted membrane pro 99.8 1.3E-18 2.9E-23 157.2 15.1 239 40-302 154-396 (416)
19 TIGR00776 RhaT RhaT L-rhamnose 99.7 1.8E-16 4E-21 145.2 21.2 244 14-296 25-288 (290)
20 KOG1441 Glucose-6-phosphate/ph 99.7 1.3E-16 2.8E-21 145.3 11.6 253 16-303 47-314 (316)
21 KOG1580 UDP-galactose transpor 99.6 3.3E-14 7.1E-19 121.2 13.9 253 18-297 54-314 (337)
22 PF04142 Nuc_sug_transp: Nucle 99.6 5.7E-13 1.2E-17 118.7 20.0 229 40-286 13-243 (244)
23 COG2510 Predicted membrane pro 99.6 1.6E-13 3.6E-18 106.2 13.7 136 158-296 4-139 (140)
24 KOG2766 Predicted membrane pro 99.5 5.7E-15 1.2E-19 127.3 3.3 227 40-297 74-300 (336)
25 KOG1581 UDP-galactose transpor 99.5 4.4E-13 9.5E-18 118.7 15.3 259 16-300 50-317 (327)
26 PF00892 EamA: EamA-like trans 99.4 5.9E-13 1.3E-17 105.9 9.4 125 167-295 1-125 (126)
27 KOG1443 Predicted integral mem 99.4 5.5E-12 1.2E-16 111.8 14.0 223 38-294 77-313 (349)
28 KOG2234 Predicted UDP-galactos 99.4 1E-10 2.2E-15 106.5 21.5 238 41-301 89-327 (345)
29 KOG1444 Nucleotide-sugar trans 99.4 3.6E-11 7.8E-16 107.8 18.2 245 23-303 49-307 (314)
30 KOG1442 GDP-fucose transporter 99.3 2.5E-12 5.4E-17 112.2 4.6 259 16-305 60-336 (347)
31 PF00892 EamA: EamA-like trans 99.2 5.4E-11 1.2E-15 94.4 8.6 112 5-122 7-125 (126)
32 PF03151 TPT: Triose-phosphate 99.2 4.9E-10 1.1E-14 92.7 13.9 138 158-296 1-153 (153)
33 COG5070 VRG4 Nucleotide-sugar 99.2 1.4E-10 3E-15 98.5 9.1 235 41-302 65-302 (309)
34 KOG1582 UDP-galactose transpor 99.2 5.5E-10 1.2E-14 97.5 12.5 250 17-299 75-335 (367)
35 PRK15430 putative chlorampheni 99.1 8.1E-10 1.8E-14 101.7 14.0 138 154-295 5-144 (296)
36 PF06800 Sugar_transport: Suga 99.1 1.3E-08 2.9E-13 90.7 20.8 224 36-293 35-268 (269)
37 COG2510 Predicted membrane pro 99.1 4.7E-11 1E-15 92.7 4.5 108 8-122 22-138 (140)
38 KOG3912 Predicted integral mem 99.1 1.7E-09 3.7E-14 94.9 14.2 223 47-295 89-333 (372)
39 TIGR03340 phn_DUF6 phosphonate 99.1 2.3E-09 5E-14 97.9 15.0 133 159-296 3-135 (281)
40 KOG1583 UDP-N-acetylglucosamin 99.1 8E-11 1.7E-15 103.0 4.6 258 18-297 34-315 (330)
41 TIGR00688 rarD rarD protein. T 99.1 2.1E-09 4.6E-14 96.8 13.6 136 157-295 2-141 (256)
42 KOG4314 Predicted carbohydrate 99.0 1.2E-09 2.5E-14 91.3 8.7 211 56-299 64-279 (290)
43 PF13536 EmrE: Multidrug resis 99.0 1.3E-09 2.9E-14 85.6 6.9 77 40-123 30-106 (113)
44 PLN00411 nodulin MtN21 family 99.0 1.4E-08 3.1E-13 95.6 14.9 139 156-296 12-156 (358)
45 TIGR00950 2A78 Carboxylate/Ami 98.9 3.5E-08 7.5E-13 88.8 12.8 120 169-297 1-120 (260)
46 PRK02971 4-amino-4-deoxy-L-ara 98.9 9.8E-08 2.1E-12 76.5 13.5 122 157-299 2-125 (129)
47 TIGR00803 nst UDP-galactose tr 98.8 3E-08 6.5E-13 87.4 11.5 206 72-294 5-222 (222)
48 PF13536 EmrE: Multidrug resis 98.8 2.5E-08 5.3E-13 78.4 8.8 107 192-299 3-109 (113)
49 PF05653 Mg_trans_NIPA: Magnes 98.8 8.4E-08 1.8E-12 88.1 13.7 230 46-299 51-295 (300)
50 PRK11272 putative DMT superfam 98.8 1.4E-07 3E-12 86.7 15.2 133 158-297 9-142 (292)
51 PRK11689 aromatic amino acid e 98.7 4.5E-07 9.8E-12 83.4 15.4 131 157-297 4-138 (295)
52 PRK11453 O-acetylserine/cystei 98.7 4.4E-07 9.6E-12 83.6 14.8 127 159-297 6-133 (299)
53 TIGR00817 tpt Tpt phosphate/ph 98.6 5.7E-07 1.2E-11 83.0 13.7 121 171-295 16-136 (302)
54 PTZ00343 triose or hexose phos 98.6 3.3E-06 7.2E-11 79.6 16.4 128 167-296 59-186 (350)
55 PRK13499 rhamnose-proton sympo 98.5 4.3E-05 9.4E-10 71.1 22.6 241 39-297 68-342 (345)
56 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.2E-06 2.7E-11 68.4 10.5 66 230-295 43-108 (111)
57 COG2962 RarD Predicted permeas 98.5 1.3E-06 2.7E-11 77.9 11.2 140 156-298 6-146 (293)
58 COG0697 RhaT Permeases of the 98.4 1.3E-05 2.8E-10 72.7 16.7 142 156-301 6-148 (292)
59 PRK10532 threonine and homoser 98.4 3E-06 6.5E-11 77.9 11.8 111 7-123 166-281 (293)
60 PRK15051 4-amino-4-deoxy-L-ara 98.4 2E-06 4.4E-11 67.1 8.5 69 48-122 40-108 (111)
61 TIGR00776 RhaT RhaT L-rhamnose 98.2 3.8E-05 8.1E-10 70.5 14.1 131 158-297 2-137 (290)
62 KOG2922 Uncharacterized conser 98.1 1.1E-05 2.3E-10 72.9 7.9 226 46-299 65-309 (335)
63 PF06027 DUF914: Eukaryotic pr 98.0 0.0002 4.3E-09 66.6 14.8 142 156-299 12-154 (334)
64 KOG4510 Permease of the drug/m 98.0 1.3E-06 2.7E-11 76.7 -0.4 137 154-298 35-171 (346)
65 PRK10452 multidrug efflux syst 98.0 4.4E-05 9.5E-10 60.1 8.1 68 231-298 37-105 (120)
66 COG4975 GlcU Putative glucose 98.0 2.6E-06 5.6E-11 74.0 1.0 230 35-295 50-284 (288)
67 PF08449 UAA: UAA transporter 97.8 0.00056 1.2E-08 63.2 14.7 129 168-302 11-142 (303)
68 PRK02971 4-amino-4-deoxy-L-ara 97.8 7.1E-05 1.5E-09 60.0 7.3 70 47-122 50-121 (129)
69 PRK09541 emrE multidrug efflux 97.8 0.00036 7.8E-09 54.2 10.8 66 232-297 38-104 (110)
70 PF04657 DUF606: Protein of un 97.8 0.00074 1.6E-08 54.8 12.5 132 158-293 2-138 (138)
71 PRK10650 multidrug efflux syst 97.6 0.0016 3.5E-08 50.4 11.2 63 233-295 44-107 (109)
72 PF05653 Mg_trans_NIPA: Magnes 97.5 0.00078 1.7E-08 62.0 10.5 122 153-298 3-124 (300)
73 COG3238 Uncharacterized protei 97.5 0.002 4.4E-08 52.5 11.5 138 157-297 5-147 (150)
74 PRK11431 multidrug efflux syst 97.5 0.002 4.3E-08 49.6 10.9 64 233-296 38-102 (105)
75 COG2076 EmrE Membrane transpor 97.5 0.0014 3E-08 50.1 9.3 64 234-297 40-104 (106)
76 PF00893 Multi_Drug_Res: Small 97.3 0.0032 6.9E-08 47.4 9.3 55 233-287 38-93 (93)
77 COG2076 EmrE Membrane transpor 97.2 0.0012 2.5E-08 50.5 6.3 65 52-122 37-102 (106)
78 PF06800 Sugar_transport: Suga 97.2 0.0052 1.1E-07 55.2 11.3 82 221-303 43-129 (269)
79 PRK13499 rhamnose-proton sympo 97.2 0.004 8.7E-08 58.1 10.7 139 154-298 4-155 (345)
80 PF03151 TPT: Triose-phosphate 97.2 0.0021 4.6E-08 52.7 8.0 101 13-120 31-150 (153)
81 PRK10452 multidrug efflux syst 97.1 0.0018 3.8E-08 51.1 6.9 68 50-123 35-103 (120)
82 PRK09541 emrE multidrug efflux 97.1 0.0025 5.4E-08 49.5 7.2 67 51-123 36-103 (110)
83 PRK10650 multidrug efflux syst 97.1 0.0024 5.2E-08 49.5 7.0 61 55-121 45-106 (109)
84 PRK11431 multidrug efflux syst 97.0 0.0028 6.1E-08 48.7 6.9 65 52-122 36-101 (105)
85 PF04142 Nuc_sug_transp: Nucle 97.0 0.0039 8.4E-08 55.7 8.6 68 234-301 27-94 (244)
86 PF10639 UPF0546: Uncharacteri 96.5 0.033 7.2E-07 43.3 9.5 109 164-294 3-112 (113)
87 KOG1441 Glucose-6-phosphate/ph 96.5 0.0055 1.2E-07 56.5 5.9 125 171-298 31-157 (316)
88 PF07857 DUF1632: CEO family ( 96.4 0.0089 1.9E-07 53.4 6.7 132 158-301 1-139 (254)
89 COG4975 GlcU Putative glucose 96.3 0.0033 7.1E-08 55.0 3.3 133 157-299 2-139 (288)
90 KOG2234 Predicted UDP-galactos 96.1 0.28 6E-06 45.5 14.8 139 157-296 15-164 (345)
91 PF06379 RhaT: L-rhamnose-prot 96.1 0.99 2.1E-05 41.9 18.3 240 40-296 69-340 (344)
92 PF00893 Multi_Drug_Res: Small 95.9 0.02 4.3E-07 43.1 5.5 56 52-113 36-92 (93)
93 PF10639 UPF0546: Uncharacteri 95.8 0.013 2.9E-07 45.5 4.1 63 52-121 49-112 (113)
94 KOG4314 Predicted carbohydrate 95.7 0.014 3E-07 49.5 4.0 67 236-302 65-131 (290)
95 COG5006 rhtA Threonine/homoser 95.3 0.051 1.1E-06 48.0 6.3 77 40-122 205-281 (292)
96 KOG1444 Nucleotide-sugar trans 94.7 1 2.2E-05 41.3 13.1 132 159-296 14-149 (314)
97 KOG2922 Uncharacterized conser 94.4 0.035 7.6E-07 50.6 3.1 126 152-301 16-141 (335)
98 KOG2765 Predicted membrane pro 94.4 0.12 2.6E-06 48.2 6.6 67 235-301 170-236 (416)
99 PRK02237 hypothetical protein; 92.7 0.74 1.6E-05 35.2 7.2 47 253-299 62-108 (109)
100 PF04657 DUF606: Protein of un 91.8 0.74 1.6E-05 37.3 6.9 97 16-120 29-138 (138)
101 PF06379 RhaT: L-rhamnose-prot 91.6 0.87 1.9E-05 42.2 7.8 145 153-301 3-158 (344)
102 PF02694 UPF0060: Uncharacteri 91.3 0.44 9.6E-06 36.3 4.7 46 254-299 61-106 (107)
103 TIGR00803 nst UDP-galactose tr 91.2 0.13 2.8E-06 45.0 2.1 59 56-120 163-221 (222)
104 KOG1581 UDP-galactose transpor 91.1 6.9 0.00015 35.8 12.7 140 156-301 13-160 (327)
105 KOG1443 Predicted integral mem 90.8 3.2 6.8E-05 38.0 10.3 125 175-300 34-160 (349)
106 KOG1580 UDP-galactose transpor 90.3 0.33 7E-06 42.5 3.6 75 42-123 239-313 (337)
107 COG1742 Uncharacterized conser 89.3 2 4.3E-05 32.6 6.6 47 253-299 61-107 (109)
108 KOG3912 Predicted integral mem 86.4 1.2 2.7E-05 40.1 4.7 63 235-297 97-159 (372)
109 PF07857 DUF1632: CEO family ( 84.8 26 0.00056 31.5 12.4 160 14-182 24-208 (254)
110 KOG4831 Unnamed protein [Funct 84.7 2 4.2E-05 32.7 4.4 68 48-122 56-124 (125)
111 PF05297 Herpes_LMP1: Herpesvi 84.3 0.31 6.7E-06 43.7 0.0 29 86-120 65-94 (381)
112 PF07168 Ureide_permease: Urei 82.2 0.53 1.2E-05 42.8 0.7 131 163-296 2-146 (336)
113 PF05977 MFS_3: Transmembrane 80.2 67 0.0015 32.1 14.9 38 256-293 352-389 (524)
114 PRK02237 hypothetical protein; 78.2 12 0.00026 28.7 6.7 69 47-123 35-105 (109)
115 PRK06638 NADH:ubiquinone oxido 77.6 42 0.00092 28.8 10.9 31 265-295 133-165 (198)
116 PF02694 UPF0060: Uncharacteri 77.5 16 0.00035 27.9 7.2 55 63-123 48-103 (107)
117 KOG2766 Predicted membrane pro 76.7 0.72 1.6E-05 41.0 -0.3 137 154-298 15-152 (336)
118 KOG1442 GDP-fucose transporter 73.4 4.9 0.00011 36.3 4.0 111 184-296 59-174 (347)
119 PF04342 DUF486: Protein of un 73.0 5.4 0.00012 30.4 3.6 31 265-295 77-107 (108)
120 COG3169 Uncharacterized protei 63.0 17 0.00037 27.3 4.4 32 265-296 84-115 (116)
121 TIGR02865 spore_II_E stage II 62.4 1.2E+02 0.0025 32.0 12.2 44 71-120 10-53 (764)
122 KOG1582 UDP-galactose transpor 62.2 34 0.00074 31.0 7.0 78 40-124 256-333 (367)
123 PRK13108 prolipoprotein diacyl 61.5 36 0.00079 33.3 7.7 48 252-299 225-277 (460)
124 COG3238 Uncharacterized protei 58.6 42 0.00092 27.5 6.5 99 16-121 33-144 (150)
125 COG3086 RseC Positive regulato 58.3 5.8 0.00013 32.1 1.4 28 244-271 68-95 (150)
126 COG5070 VRG4 Nucleotide-sugar 57.3 62 0.0013 28.5 7.5 61 240-300 84-144 (309)
127 KOG4831 Unnamed protein [Funct 57.0 19 0.00041 27.5 3.8 57 239-295 67-124 (125)
128 PF15471 TMEM171: Transmembran 53.8 10 0.00022 33.9 2.3 24 278-301 161-184 (319)
129 PF03595 SLAC1: Voltage-depend 53.1 1.7E+02 0.0037 26.9 10.7 77 108-206 7-91 (330)
130 COG1742 Uncharacterized conser 50.8 38 0.00083 25.8 4.6 39 79-123 66-104 (109)
131 PF03547 Mem_trans: Membrane t 50.4 2.2E+02 0.0048 26.7 13.2 7 201-207 41-47 (385)
132 KOG1583 UDP-N-acetylglucosamin 50.1 18 0.0004 32.7 3.3 69 236-304 76-145 (330)
133 PF03348 Serinc: Serine incorp 49.5 2.2E+02 0.0047 27.8 10.9 27 273-299 280-306 (429)
134 PRK11010 ampG muropeptide tran 45.0 3.1E+02 0.0067 26.9 12.5 54 244-297 345-402 (491)
135 PF10225 DUF2215: Uncharacteri 43.2 2E+02 0.0044 25.6 9.0 37 242-278 113-149 (249)
136 PF15102 TMEM154: TMEM154 prot 42.3 32 0.0007 28.0 3.3 23 282-304 67-89 (146)
137 COG0387 ChaA Ca2+/H+ antiporte 40.8 3.3E+02 0.0071 25.9 14.6 23 274-296 161-183 (368)
138 PF11381 DUF3185: Protein of u 40.2 42 0.00091 22.8 3.1 17 107-123 1-17 (59)
139 TIGR03644 marine_trans_1 proba 39.9 3.5E+02 0.0077 26.1 15.0 64 226-289 296-361 (404)
140 MTH00057 ND6 NADH dehydrogenas 38.9 2.4E+02 0.0053 23.9 9.7 25 265-289 132-156 (186)
141 PF08507 COPI_assoc: COPI asso 38.7 31 0.00067 27.6 2.8 14 281-294 90-103 (136)
142 COG3965 Predicted Co/Zn/Cd cat 36.3 3.3E+02 0.0072 24.7 13.5 50 71-120 51-100 (314)
143 PF04342 DUF486: Protein of un 35.0 1E+02 0.0022 23.6 4.8 47 68-120 58-105 (108)
144 PF01102 Glycophorin_A: Glycop 34.8 18 0.0004 28.5 0.9 11 282-292 75-85 (122)
145 PF08507 COPI_assoc: COPI asso 34.5 80 0.0017 25.2 4.6 15 281-295 97-111 (136)
146 PF04246 RseC_MucC: Positive r 34.1 27 0.00058 27.9 1.7 23 249-271 66-88 (135)
147 PLN00028 nitrate transmembrane 33.6 3.3E+02 0.0071 26.5 9.7 14 281-294 417-430 (476)
148 TIGR00892 2A0113 monocarboxyla 32.8 3.2E+02 0.007 26.3 9.4 10 281-290 404-413 (455)
149 PF11044 TMEMspv1-c74-12: Plec 32.2 22 0.00047 22.5 0.7 18 276-293 2-19 (49)
150 PF02487 CLN3: CLN3 protein; 31.9 4.1E+02 0.0088 25.7 9.6 40 78-123 67-108 (402)
151 COG0670 Integral membrane prot 31.7 3.6E+02 0.0079 23.8 14.9 137 15-182 58-196 (233)
152 PRK10746 putative transport pr 29.9 5.2E+02 0.011 25.2 10.3 28 154-181 430-457 (461)
153 COG2271 UhpC Sugar phosphate p 29.5 4.4E+02 0.0096 25.8 9.3 134 157-302 66-211 (448)
154 COG3086 RseC Positive regulato 28.4 77 0.0017 25.8 3.4 44 69-119 72-115 (150)
155 PF09656 PGPGW: Putative trans 28.0 1.2E+02 0.0025 20.2 3.6 44 108-182 6-49 (53)
156 COG5336 Uncharacterized protei 27.6 1E+02 0.0022 23.8 3.7 29 258-288 53-84 (116)
157 TIGR02840 spore_YtaF putative 27.5 77 0.0017 27.4 3.6 47 249-295 32-80 (206)
158 PF15108 TMEM37: Voltage-depen 26.2 3E+02 0.0064 22.8 6.4 79 108-205 92-172 (184)
159 TIGR00544 lgt prolipoprotein d 24.3 2.4E+02 0.0052 25.6 6.4 46 252-297 213-267 (278)
160 TIGR03802 Asp_Ala_antiprt aspa 24.2 4.5E+02 0.0098 26.6 8.9 16 166-181 70-85 (562)
161 COG4858 Uncharacterized membra 24.1 4.6E+02 0.0099 22.5 8.5 74 43-123 126-208 (226)
162 PRK14397 membrane protein; Pro 23.7 2.2E+02 0.0048 25.0 5.7 11 158-168 49-59 (222)
163 PF05961 Chordopox_A13L: Chord 23.5 49 0.0011 23.0 1.3 22 279-300 5-26 (68)
164 PF15099 PIRT: Phosphoinositid 23.2 71 0.0015 25.2 2.3 17 224-240 57-73 (129)
165 PRK11469 hypothetical protein; 23.1 64 0.0014 27.5 2.3 44 252-295 42-86 (188)
166 PRK03893 putative sialic acid 22.9 6.8E+02 0.015 24.0 13.0 8 20-27 111-118 (496)
167 PRK09412 anaerobic C4-dicarbox 22.8 7.1E+02 0.015 24.2 11.8 31 85-123 7-37 (433)
168 COG3169 Uncharacterized protei 22.4 1.6E+02 0.0034 22.3 3.8 32 85-122 83-114 (116)
169 PRK10862 SoxR reducing system 22.1 49 0.0011 27.2 1.3 20 251-270 75-94 (154)
170 PF15345 TMEM51: Transmembrane 21.6 43 0.00092 29.4 0.8 23 282-304 67-89 (233)
171 PF14851 FAM176: FAM176 family 21.5 2.8E+02 0.0061 22.8 5.5 19 242-260 11-29 (153)
172 TIGR01167 LPXTG_anchor LPXTG-m 21.5 1E+02 0.0022 17.7 2.3 17 276-292 10-26 (34)
173 PF14851 FAM176: FAM176 family 21.3 92 0.002 25.6 2.7 16 282-297 32-47 (153)
174 TIGR00881 2A0104 phosphoglycer 21.3 6E+02 0.013 22.8 11.0 16 167-182 41-56 (379)
175 PF06609 TRI12: Fungal trichot 21.0 9E+02 0.02 24.7 12.9 171 94-293 233-419 (599)
176 PF08693 SKG6: Transmembrane a 20.9 79 0.0017 19.7 1.7 18 282-299 21-38 (40)
177 COG4858 Uncharacterized membra 20.5 4E+02 0.0086 22.8 6.3 27 223-249 127-153 (226)
178 PF06645 SPC12: Microsomal sig 20.5 1.4E+02 0.003 21.3 3.2 43 256-298 16-58 (76)
179 PF13038 DUF3899: Domain of un 20.1 61 0.0013 23.9 1.3 20 277-296 3-22 (92)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=262.93 Aligned_cols=279 Identities=26% Similarity=0.488 Sum_probs=214.9
Q ss_pred CCCchHHHHHHHHHHH-----hh-cc-C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHH
Q 019825 14 AVPHCQCFIFRHLSYK-----LA-CR-N--SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVI 84 (335)
Q Consensus 14 ~~~p~~~~~~R~~~a~-----~~-~~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~ 84 (335)
+++|+.+.++|+.++. +. .+ + ++++.+++++.++.+.|+++ ..++.++++|++|++++.++++.+++|++
T Consensus 39 G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~ 117 (358)
T PLN00411 39 GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPAL 117 (358)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-HHHHHHHHHHHhhccHHHHHHHHHhhHHH
Confidence 8999999999999988 11 12 1 22344578889999999999 57888999999999999999999999999
Q ss_pred HHHHHHHh------ccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccc-cchhhhhhhcccCCC-CCCCchh
Q 019825 85 TFVIALPF------GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSY-SQAETAINVMHMHPT-RKTERWT 156 (335)
Q Consensus 85 ~~lla~~~------~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 156 (335)
+.++++++ +|||+++++ ++|++++++|+.+++.+++.....++. ...|. ..+.++. .+..+..
T Consensus 118 ~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 188 (358)
T PLN00411 118 TFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRVFVASSPPYLNF---RQLSPPLSSSNSDWL 188 (358)
T ss_pred HHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCcccccccccccccc---cccccccCCCcccHH
Confidence 99999999 589988886 999999999999988644422100000 00000 0000001 1123446
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhcc-CCCcccccchhHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR-NHSAWSFKGKIEIISVLYAGIVGSG 235 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~ 235 (335)
.|++++++++++||+|++++|+..+++++....++++..++.+.+.+..+..+. +...|..........++|.+++ +.
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~ 267 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TS 267 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHH-HH
Confidence 799999999999999999999998888776677788887777777666665443 2223322122335567788875 67
Q ss_pred HHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccchh
Q 019825 236 LCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 303 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~~ 303 (335)
++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++++.|+++..+.++||.+
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~ 335 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK 335 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999876666543
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.97 E-value=5.8e-30 Score=235.07 Aligned_cols=260 Identities=15% Similarity=0.146 Sum_probs=214.8
Q ss_pred hhhHHhhhhcCCCchHHHHHHHHHHH-----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hccchhHHHHH
Q 019825 4 SMTMMNNFLSAVPHCQCFIFRHLSYK-----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGI-QYTSATFACAF 77 (335)
Q Consensus 4 s~~~~k~~~~~~~p~~~~~~R~~~a~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al-~~~~~~~a~~i 77 (335)
+..++|...++++|.+++++|+.++. +..+++++..+++++.+....|.++...++.+++++. ++++++.++++
T Consensus 23 ~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l 102 (292)
T PRK11272 23 TYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV 102 (292)
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 45678999999999999999999998 2222222233577888888999888667888999999 99999999999
Q ss_pred hhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhH
Q 019825 78 INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTF 157 (335)
Q Consensus 78 ~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (335)
.++.|+++.+++++ +|||+++++ ++|++++++|+.++.. ++. .+....
T Consensus 103 ~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~-~~~------------------------~~~~~~ 150 (292)
T PRK11272 103 VATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNS-GGN------------------------LSGNPW 150 (292)
T ss_pred HHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhc-Ccc------------------------cccchH
Confidence 99999999999986 699999998 9999999999988763 110 112247
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
|++++++++++||.+.+..|+..++ ++...+.+.+.++.+.+.+.....+..... .++...|..+++.++++++++
T Consensus 151 G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 151 GAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997644 335567788888888777776544322111 124467889999999999999
Q ss_pred HHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 238 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++++.|+++..+.++
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999998865433
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.97 E-value=5.3e-29 Score=229.47 Aligned_cols=262 Identities=18% Similarity=0.172 Sum_probs=202.4
Q ss_pred hhhHHhhhhcCCCchHHHHHHHHHHH----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHh
Q 019825 4 SMTMMNNFLSAVPHCQCFIFRHLSYK----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQY-TSATFACAFI 78 (335)
Q Consensus 4 s~~~~k~~~~~~~p~~~~~~R~~~a~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~a~~i~ 78 (335)
+..++|...+++||+.+.++|+.++. ...++ ++.+ ++..+..|+......+.+++.+++| .+++.++++.
T Consensus 19 ~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~--~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~ 93 (299)
T PRK11453 19 NFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVAR--PKVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVL 93 (299)
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcC--CCCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 45678999999999999999999876 22222 2222 2334555665544666788899998 5889999999
Q ss_pred hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHH
Q 019825 79 NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFG 158 (335)
Q Consensus 79 ~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 158 (335)
+++|+++.+++++++|||+++++ +++++++++|+.++.. .+. + ..+....|
T Consensus 94 ~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~-~~~---------------------~-~~~~~~~G 144 (299)
T PRK11453 94 QAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE-DSL---------------------N-GQHVAMLG 144 (299)
T ss_pred HhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc-ccC---------------------C-CcchhHHH
Confidence 99999999999999999999998 9999999999998873 110 0 11222479
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhccCCCc--hhHHHHHHHHHHHHHHHHHHHhccCC---CcccccchhHHHHHHHHHHHH
Q 019825 159 TIALTVGTLLWASWFPIQSYIGKRYPCK--YSSTAILSLFGAIQAAILCLATNRNH---SAWSFKGKIEIISVLYAGIVG 233 (335)
Q Consensus 159 ~~~~l~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~~~ 233 (335)
++++++++++|+.|.++.|+..++++++ .....+....+.+.........+... ..+...+...|..++|.++++
T Consensus 145 ~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~ 224 (299)
T PRK11453 145 FMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVA 224 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999987654332 23344555554444443333333211 111122456799999999999
Q ss_pred HHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 234 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+++..+.++
T Consensus 225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999999999999999999999999999999998876554
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=1.5e-28 Score=225.94 Aligned_cols=265 Identities=13% Similarity=0.091 Sum_probs=196.4
Q ss_pred hhhHHhhhhcCCCchHHHHHHHHHHH---hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cchhHHHH
Q 019825 4 SMTMMNNFLSAVPHCQCFIFRHLSYK---LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQY----TSATFACA 76 (335)
Q Consensus 4 s~~~~k~~~~~~~p~~~~~~R~~~a~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~a~~ 76 (335)
+..++|..++++||+.+.++|+.++. +...+ +++.++. +++.++.+.++...++.+++.+++| ++++++++
T Consensus 19 ~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~ 96 (295)
T PRK11689 19 MVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG-FPRLRQF-PKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGM 96 (295)
T ss_pred HHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc-ccccccc-cHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHH
Confidence 45789999999999999999999988 21221 2222222 2334445555556888888888765 57788899
Q ss_pred HhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchh
Q 019825 77 FINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWT 156 (335)
Q Consensus 77 i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (335)
+.+++|+++.+++++++|||+++++ +.|++++++|+.++.. ++..... .+. ..+..+..
T Consensus 97 l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~-~~~~~~~--~~~------------~~~~~~~~ 155 (295)
T PRK11689 97 VNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLG-GDNGLSL--AEL------------INNIASNP 155 (295)
T ss_pred HHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheec-CCccchh--hhh------------hhccccCh
Confidence 9999999999999999999999997 9999999999999874 2111000 000 00111234
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 236 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 236 (335)
.|++++++++++||.|.++.|+..+++ ++..... ..+.+.+.+.....+... .. .+...|..+++.++ .+++
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~~~~--~~-~~~~~~~~l~~~~~-~t~~ 227 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSPQPA--MV-FSLPAIIKLLLAAA-AMGF 227 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhcCcc--cc-CCHHHHHHHHHHHH-HHHH
Confidence 699999999999999999999987664 4444322 223333333333322211 11 13456777788785 7899
Q ss_pred HHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 237 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus 228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 999999999999999999999999999999999999999999999999999999988865443
No 5
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=5.9e-28 Score=217.88 Aligned_cols=249 Identities=16% Similarity=0.190 Sum_probs=208.0
Q ss_pred hhHHhhhhc-CCCchHHHHHHHHHHH----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh
Q 019825 5 MTMMNNFLS-AVPHCQCFIFRHLSYK----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN 79 (335)
Q Consensus 5 ~~~~k~~~~-~~~p~~~~~~R~~~a~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~ 79 (335)
-...|..++ ..|+....+.|++.+. ...+.+ .+++++.+++..|.++..+++.++++|++|+++++++++.+
T Consensus 5 ~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~ 81 (260)
T TIGR00950 5 GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLY 81 (260)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHh
Confidence 345777765 5788888899988887 111222 45678888899999888899999999999999999999999
Q ss_pred hhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHH
Q 019825 80 MVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGT 159 (335)
Q Consensus 80 ~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 159 (335)
+.|+++.+++++++|||+++++ ++|+.++++|+.++.. ++ +.+....|+
T Consensus 82 ~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~------------------------~~~~~~~G~ 130 (260)
T TIGR00950 82 LAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DG------------------------NLSINPAGL 130 (260)
T ss_pred hhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CC------------------------cccccHHHH
Confidence 9999999999999999999998 9999999999999863 21 012335899
Q ss_pred HHHHHHHHHHHhHHHHHHHhhccCCC-chhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHH
Q 019825 160 IALTVGTLLWASWFPIQSYIGKRYPC-KYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY 238 (335)
Q Consensus 160 ~~~l~aa~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 238 (335)
+++++++++|+.+.+..|+..++++. +.....+.+.++.+++.+.....+... .. +...+..+++.+++++++++
T Consensus 131 ~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~ 206 (260)
T TIGR00950 131 LLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTALAY 206 (260)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876432 334455678888888888776543322 11 44677889999999999999
Q ss_pred HHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhh
Q 019825 239 VGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGL 291 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~ 291 (335)
.+|++++++.++.+++.+.+++|+++.+++++++||+++..++.|.++++.|+
T Consensus 207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999986
No 6
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=3.4e-28 Score=224.45 Aligned_cols=257 Identities=12% Similarity=0.057 Sum_probs=204.9
Q ss_pred hhhhcC-CCchHHHHHHHHHHH----hh---ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhh
Q 019825 9 NNFLSA-VPHCQCFIFRHLSYK----LA---CRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINM 80 (335)
Q Consensus 9 k~~~~~-~~p~~~~~~R~~~a~----~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~ 80 (335)
|..+++ .+|+.+++.|+.++. .. ..+++++.+++++++++..|+++ ..++.+.+++++|++++.++++.++
T Consensus 22 K~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~li~~~ 100 (302)
T TIGR00817 22 KKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHTIKAM 100 (302)
T ss_pred HHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhc
Confidence 556666 679999999999887 22 13345567889999999999998 5899999999999999999999999
Q ss_pred hHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHH
Q 019825 81 VPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTI 160 (335)
Q Consensus 81 ~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 160 (335)
.|+++.+++++++|||+++++ +.|++++++|+.+... ++ .+....|++
T Consensus 101 ~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~--~~------------------------~~~~~~G~~ 148 (302)
T TIGR00817 101 EPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD--TE------------------------LSFNWAGFL 148 (302)
T ss_pred chHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC--Cc------------------------ccccHHHHH
Confidence 999999999999999999998 9999999999987541 10 122347999
Q ss_pred HHHHHHHHHHhHHHHHHHhhc--cCCCchhHHHHHHHHHHHHHHHHHHHhccCCCc---cc-----ccchhHHHHHHHHH
Q 019825 161 ALTVGTLLWASWFPIQSYIGK--RYPCKYSSTAILSLFGAIQAAILCLATNRNHSA---WS-----FKGKIEIISVLYAG 230 (335)
Q Consensus 161 ~~l~aa~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~-----~~~~~~~~~l~~~g 230 (335)
++++++++|+++.+..|+..+ ++ ++...+.+++..+.+.++|.....+..+.. +. ......+...+..+
T Consensus 149 ~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
T TIGR00817 149 SAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA 227 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence 999999999999999999877 53 668899999999999999988765431110 00 00011122222333
Q ss_pred HHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 231 IVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
..+....+.++++++++++|++.+++.+++|+++++++++++||+++..+++|+++++.|++++.+.|+
T Consensus 228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 323333335666899999999999999999999999999999999999999999999999999876543
No 7
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.96 E-value=2.6e-27 Score=217.63 Aligned_cols=254 Identities=15% Similarity=0.074 Sum_probs=200.8
Q ss_pred hhHHhhhhcCCCchHHHHHHHHHHH----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhh
Q 019825 5 MTMMNNFLSAVPHCQCFIFRHLSYK----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINM 80 (335)
Q Consensus 5 ~~~~k~~~~~~~p~~~~~~R~~~a~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~ 80 (335)
-...|...+++||.++.++|++++. ...++++.+.++++++..+..|++. ...+.++++++++++++.++++..+
T Consensus 28 ~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~t 106 (293)
T PRK10532 28 ASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSL-GGMNYLFYLSIQTVPLGIAVALEFT 106 (293)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHH-HHHHHHHHHHHhcccHHHHHHHHHH
Confidence 4578999999999999999999998 1222233345678888888999876 5888999999999999999999999
Q ss_pred hHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHH
Q 019825 81 VPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTI 160 (335)
Q Consensus 81 ~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 160 (335)
+|+++.+++ +|++++ ..++.++++|+.++.. .+.+ ..+....|++
T Consensus 107 ~Pi~~~ll~----~~~~~~--------~~~~~i~~~Gv~li~~-~~~~----------------------~~~~~~~G~l 151 (293)
T PRK10532 107 GPLAVALFS----SRRPVD--------FVWVVLAVLGLWFLLP-LGQD----------------------VSHVDLTGAA 151 (293)
T ss_pred HHHHHHHHh----cCChHH--------HHHHHHHHHHHheeee-cCCC----------------------cccCChHHHH
Confidence 999998876 355433 4557788999988763 1211 1122347999
Q ss_pred HHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHH
Q 019825 161 ALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVG 240 (335)
Q Consensus 161 ~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 240 (335)
++++++++|+.|.+..|+..+++ ++... .+...++.+.+.+.....+.. ..+ +...+..+++.|+++++++|.+
T Consensus 152 l~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~~-~~~---~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 152 LALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAGE-ALW---HWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccCc-ccC---CHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987764 44554 455566677777766553321 111 3345666789999999999999
Q ss_pred HHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecccc
Q 019825 241 LTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 300 (335)
Q Consensus 241 ~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~ 300 (335)
|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|+....+..+|
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988655433
No 8
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=1.2e-25 Score=206.75 Aligned_cols=249 Identities=13% Similarity=0.073 Sum_probs=180.5
Q ss_pred HHhhhhcCCCchHHHHHHHHHHH-----h-hccCCCCC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 019825 7 MMNNFLSAVPHCQCFIFRHLSYK-----L-ACRNSRPK----L-TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFAC 75 (335)
Q Consensus 7 ~~k~~~~~~~p~~~~~~R~~~a~-----~-~~~~~~~~----~-~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ 75 (335)
.+|. .+++||.++.++|++++. + ..+++++. . +++++.. ...+.++...++.++++|++++++++++
T Consensus 26 ~~k~-~~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~a~ 103 (296)
T PRK15430 26 YFKL-IYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAVLIGGNWLLFIWAVNNHHMLEAS 103 (296)
T ss_pred HHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCchHHHH
Confidence 4465 478999999999999988 1 12222111 1 2333333 3456666678999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCch
Q 019825 76 AFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERW 155 (335)
Q Consensus 76 ~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (335)
++.++.|+++.+++++++|||+++++ +.|++++++|+.++...++ +.
T Consensus 104 ~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~-------------------------~~-- 150 (296)
T PRK15430 104 LGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG-------------------------SL-- 150 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC-------------------------Cc--
Confidence 99999999999999999999999998 9999999999999873111 00
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGS 234 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 234 (335)
.+++++++++||.|.+..|+..++.. +....+.+...++.+...+. .......+...+...+..+.+.|+ .+
T Consensus 151 ---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~-~t 223 (296)
T PRK15430 151 ---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQNPMSLNLLLIAAGI-VT 223 (296)
T ss_pred ---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccCCcHHHHHHHHHHHH-HH
Confidence 14678899999999999998754311 11222233333333322111 111111111112122333444455 67
Q ss_pred HHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 235 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
.++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+.+....
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999888877543
No 9
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.94 E-value=2.9e-25 Score=208.53 Aligned_cols=257 Identities=14% Similarity=0.130 Sum_probs=204.1
Q ss_pred HHhhhhcCCC-chHHHHHHHHHHH----hhc---cCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 019825 7 MMNNFLSAVP-HCQCFIFRHLSYK----LAC---RNSRPKL--TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACA 76 (335)
Q Consensus 7 ~~k~~~~~~~-p~~~~~~R~~~a~----~~~---~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~ 76 (335)
.-|..++.+| |+.+.++|++++. ..+ .+++++. .+++++.++..|+++.. .+...+.|+++++++.+++
T Consensus 67 ~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~-~~~~~~~sl~~~svs~~~i 145 (350)
T PTZ00343 67 DNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF-VHFGAVISMGLGAVSFTHV 145 (350)
T ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccHHHHHH
Confidence 4578888999 9999999999986 111 2233334 34688999999999974 4566779999999999999
Q ss_pred HhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchh
Q 019825 77 FINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWT 156 (335)
Q Consensus 77 i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (335)
+..+.|+++++++++++|||+++++ +.+++++++|+++.+. +. .+...
T Consensus 146 ika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~-~~-------------------------~~~~~ 193 (350)
T PTZ00343 146 VKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV-KE-------------------------LHFTW 193 (350)
T ss_pred HHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec-cc-------------------------chhHH
Confidence 9999999999999999999999997 9999999999999873 11 12235
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCC------CchhHHHHHHHHHHHHHHHHHHHhccCC--Ccc----cccchhHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYP------CKYSSTAILSLFGAIQAAILCLATNRNH--SAW----SFKGKIEII 224 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~----~~~~~~~~~ 224 (335)
.|++++++++++|++++++.|+..++++ ++.....+....+.++++|+....+... ..+ .......+.
T Consensus 194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~ 273 (350)
T PTZ00343 194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKG 273 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchH
Confidence 7999999999999999999999876532 3444566668899999999887554311 011 000111123
Q ss_pred HHHHHHHHHHHHHHHHHHH----HhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 225 SVLYAGIVGSGLCYVGLTW----CVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 225 ~l~~~g~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
.+++ .++.+++++++|+. +++++++...++..+++|+++++++++++||++++.+++|.++++.|++++++.
T Consensus 274 ~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 274 IIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 3444 34567888988884 999999999999999999999999999999999999999999999999998754
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=2.1e-24 Score=198.60 Aligned_cols=265 Identities=19% Similarity=0.216 Sum_probs=205.3
Q ss_pred CCCchHHHHHHHHHHH-----hhccCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHH
Q 019825 14 AVPHCQCFIFRHLSYK-----LACRNSR---PKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVIT 85 (335)
Q Consensus 14 ~~~p~~~~~~R~~~a~-----~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~ 85 (335)
+.|.++..+...+... ...|+.. .+..+++|.++++.+++-. .++.+.+.|++|++.+.++++.++..+++
T Consensus 41 ~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv-~aN~~~v~a~~yTsvtS~~lL~~~~i~~~ 119 (334)
T PF06027_consen 41 NIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV-EANYLVVLAYQYTSVTSVQLLDCTSIPFV 119 (334)
T ss_pred cCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH-HHHHHHHHHhhcccHhHHHhhhhhhhHHH
Confidence 3455655555555554 2233322 2224578888889999995 99999999999999999999999999999
Q ss_pred HHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHH
Q 019825 86 FVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVG 165 (335)
Q Consensus 86 ~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a 165 (335)
++++++++|+|+++.+ ++|++++++|+.+++..|....+. +...++..+|+++++++
T Consensus 120 ~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~~-----------------~~~~~~~i~GDll~l~~ 176 (334)
T PF06027_consen 120 MILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGSD-----------------SSSGSNPILGDLLALLG 176 (334)
T ss_pred HHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeeccccccc-----------------CCCCCccchhHHHHHHH
Confidence 9999999999999998 999999999999988533211100 12345668999999999
Q ss_pred HHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccC-CCcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 019825 166 TLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN-HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWC 244 (335)
Q Consensus 166 a~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 244 (335)
+++||.+++..++..++. +......+..+++.++..+.....+.+ ....+ +............++...-|.+....
T Consensus 177 a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p~~ 253 (334)
T PF06027_consen 177 AILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIH--WTSQVIGLLVGYALCLFLFYSLVPIV 253 (334)
T ss_pred HHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccC--CChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999885 457788888889999888887766553 22222 11222222222333556777788899
Q ss_pred hhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccchhhh
Q 019825 245 VKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNC 305 (335)
Q Consensus 245 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~~~~ 305 (335)
++..+|+..++-..+..+++++++++++|+++++..++|.++++.|.+++...++++.++.
T Consensus 254 l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~ 314 (334)
T PF06027_consen 254 LRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR 314 (334)
T ss_pred HHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence 9999999999999999999999999999999999999999999999999987776654433
No 11
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.93 E-value=4.2e-24 Score=195.16 Aligned_cols=218 Identities=15% Similarity=0.120 Sum_probs=164.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
+++.+...+. +.++...++.++++|+++.+++.++++.++.|+++.+++++++|||+++++ ++|+.+++.|+.
T Consensus 59 ~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ 131 (281)
T TIGR03340 59 PATFWLLLAI-SAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLL 131 (281)
T ss_pred chhhHHHHHH-HHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHH
Confidence 3344444444 444446999999999999999999999999999999999999999999998 999999999999
Q ss_pred HHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHH
Q 019825 120 LLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAI 199 (335)
Q Consensus 120 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i 199 (335)
++.. ++. ......|+.++++++++|+.|.+..|+..++.++......+ ...+.+
T Consensus 132 ll~~-~~~------------------------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~ 185 (281)
T TIGR03340 132 VLGL-SRF------------------------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGY-LGIGFL 185 (281)
T ss_pred HHhc-ccc------------------------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHH-HHHHHH
Confidence 8863 110 11123688899999999999999988865443221211111 112221
Q ss_pred HH-HHHHHH---hccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCc
Q 019825 200 QA-AILCLA---TNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHER 275 (335)
Q Consensus 200 ~~-~~~~~~---~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~ 275 (335)
.. .+.... .+.. ... .....+..+++.+.+.++++|.+|++++++.++++++.+.+++|+++.+++++++||+
T Consensus 186 ~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~ 262 (281)
T TIGR03340 186 AMGWPFLLLYLKRHGR--SMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNER 262 (281)
T ss_pred HHHHHHHHHHHHHhcc--chh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCC
Confidence 11 222221 1111 111 1233456777888889999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHhhhh
Q 019825 276 LHIGSLLGSITVIIGLYI 293 (335)
Q Consensus 276 ~~~~~~~G~~lii~g~~l 293 (335)
++..+++|+++++.|+++
T Consensus 263 ~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 263 WYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred ccHHHHHHHHHHHHhHHh
Confidence 999999999999999875
No 12
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.89 E-value=4e-21 Score=175.22 Aligned_cols=255 Identities=22% Similarity=0.332 Sum_probs=193.9
Q ss_pred HHhhhhcC-CCchHHHHHHHHHHH---h-hccCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh
Q 019825 7 MMNNFLSA-VPHCQCFIFRHLSYK---L-ACRNSR--PKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN 79 (335)
Q Consensus 7 ~~k~~~~~-~~p~~~~~~R~~~a~---~-~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~ 79 (335)
..|...++ .++....+.|.+.+. . ..++++ .....+.+.+.++.+.+....++.+++.++++++++.+.++.+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (292)
T COG0697 25 ALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIG 104 (292)
T ss_pred HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 44555555 666777777999888 1 122221 1112222556677777777899999999999999999999999
Q ss_pred hhHHHHHHHHH-HhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHH
Q 019825 80 MVPVITFVIAL-PFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFG 158 (335)
Q Consensus 80 ~~Pl~~~lla~-~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 158 (335)
+.|+++.++++ +++|||+++++ +.++.+++.|+.++...+. . .... ...|
T Consensus 105 ~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~-~---------------------~~~~-~~~g 155 (292)
T COG0697 105 LLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGG-G---------------------GGIL-SLLG 155 (292)
T ss_pred HHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCC-c---------------------chhH-HHHH
Confidence 99999999997 77799999997 9999999999999984211 1 0011 4689
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhccCCCchhHHH-HHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 159 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA-ILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 159 ~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
+++.++++++|+.+.+..|+.. + .++..... +.+........+... ... . .......+..+.+.|++.++++
T Consensus 156 ~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~~~~~~~g~~~~~i~ 228 (292)
T COG0697 156 LLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--SGF-G--APILSRAWLLLLYLGVFSTGLA 228 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--ccc-c--ccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 3 23344444 333311222212211 111 1 1124467888999999998899
Q ss_pred HHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 238 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
+.++.+++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999988765
No 13
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.89 E-value=5e-21 Score=172.56 Aligned_cols=222 Identities=10% Similarity=0.075 Sum_probs=159.6
Q ss_pred HHhhhhcCCCchHHHHHHHHHHH-h----h-ccCCCC-------CCCHHH-HHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 019825 7 MMNNFLSAVPHCQCFIFRHLSYK-L----A-CRNSRP-------KLTLRI-LFCLFFSAIVGTSLTQYFFLLGIQYTSAT 72 (335)
Q Consensus 7 ~~k~~~~~~~p~~~~~~R~~~a~-~----~-~~~~~~-------~~~~~~-~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 72 (335)
..|. +++++|.++.++|++++. . . .+++++ +.++++ +......|++. ..++.++++|+++++++
T Consensus 20 ~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~a~~~~~~~ 97 (256)
T TIGR00688 20 YSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI-GFNWWLFIWAVNNGSSL 97 (256)
T ss_pred HHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH-HHHHHHHHHHHHcchHH
Confidence 5565 567999999999999988 1 1 222211 111222 33456677765 59999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCC
Q 019825 73 FACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKT 152 (335)
Q Consensus 73 ~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (335)
+++++.++.|+++.+++++++|||+++++ +.+++++++|+.++...++ +
T Consensus 98 ~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~-------------------------~ 146 (256)
T TIGR00688 98 EVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG-------------------------S 146 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------------------------C
Confidence 99999999999999999999999999998 9999999999998863111 1
Q ss_pred CchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHH
Q 019825 153 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIV 232 (335)
Q Consensus 153 ~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 232 (335)
. .+++++++++|+.|.+..|+..++ +. ...... .....+...+.....+. .......+...|..+++.|++
T Consensus 147 ~-----~~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~ 217 (256)
T TIGR00688 147 L-----PWEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYLLQTDF-ATVQQTNPFPIWLLLVLAGLI 217 (256)
T ss_pred c-----hHHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHHHHhcc-CcccccCchhHHHHHHHHHHH
Confidence 1 135788999999999999997543 22 222211 12222222222221111 111111123468888888875
Q ss_pred HHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHH
Q 019825 233 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 271 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~ 271 (335)
+.++|.++++++|+.++++++.+.+++|+++.++++++
T Consensus 218 -t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 218 -TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred -HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999764
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.87 E-value=2.8e-20 Score=159.69 Aligned_cols=255 Identities=16% Similarity=0.083 Sum_probs=210.4
Q ss_pred HHhhhhcCCCchHHHHHHHHHHH----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhH
Q 019825 7 MMNNFLSAVPHCQCFIFRHLSYK----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVP 82 (335)
Q Consensus 7 ~~k~~~~~~~p~~~~~~R~~~a~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~P 82 (335)
.-|..-...+|...+.+|..++. ..+|..+++.++++|+..+.-|+... ..|.+||.+++..|.+.+..+..+-|
T Consensus 30 ~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg-~MNl~FY~si~riPlGiAVAiEF~GP 108 (292)
T COG5006 30 FAKSLFPLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLG-GMNLLFYLSIERIPLGIAVAIEFTGP 108 (292)
T ss_pred HHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHH-HHHHHHHHHHHhccchhhhhhhhccH
Confidence 44666678899999999999999 44666678889999999999999884 89999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHH
Q 019825 83 VITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIAL 162 (335)
Q Consensus 83 l~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 162 (335)
+.+.++.. |+..+ ...+.+++.|+.++.. .+ .+.+.....|..++
T Consensus 109 L~vA~~~s---Rr~~d---------~vwvaLAvlGi~lL~p-~~----------------------~~~~~lDp~Gv~~A 153 (292)
T COG5006 109 LAVALLSS---RRLRD---------FVWVALAVLGIWLLLP-LG----------------------QSVWSLDPVGVALA 153 (292)
T ss_pred HHHHHHhc---cchhh---------HHHHHHHHHHHHhhee-cc----------------------CCcCcCCHHHHHHH
Confidence 87766553 33322 5567789999988873 22 22244556999999
Q ss_pred HHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 019825 163 TVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLT 242 (335)
Q Consensus 163 l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 242 (335)
+.++.+|+.|.+..+|..+. .+....+..-+.+++++.+|+....... . ..++.....-+..+++++++.|.+-.
T Consensus 154 l~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~--~--l~~p~ll~laLgvavlSSalPYsLEm 228 (292)
T COG5006 154 LGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP--A--LFSPSLLPLALGVAVLSSALPYSLEM 228 (292)
T ss_pred HHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch--h--hcChHHHHHHHHHHHHhcccchHHHH
Confidence 99999999999999998864 3557778899999999999998854331 1 11345566677789999999999999
Q ss_pred HHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccch
Q 019825 243 WCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM 302 (335)
Q Consensus 243 ~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~ 302 (335)
.++++.+....+.+..++|.++.+.|++++||.+|..||.|++.++.+..-..+..+|+.
T Consensus 229 iAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~ 288 (292)
T COG5006 229 IALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA 288 (292)
T ss_pred HHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence 999999999999999999999999999999999999999999999999887766555543
No 15
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.87 E-value=8e-24 Score=182.55 Aligned_cols=270 Identities=18% Similarity=0.145 Sum_probs=206.1
Q ss_pred hhhHHhhhhcCCCchHHHHHHHHHHH------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 019825 4 SMTMMNNFLSAVPHCQCFIFRHLSYK------LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAF 77 (335)
Q Consensus 4 s~~~~k~~~~~~~p~~~~~~R~~~a~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i 77 (335)
+|.+.+. ..+.+|.+..-.|++.-+ .+.+++..-.+..+++++++.|..|. .+..+.|||++|.+.++|.+|
T Consensus 52 ~~vv~t~-~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~-tgvmlmyya~~~mslaDA~vI 129 (346)
T KOG4510|consen 52 CMVVSTK-VLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGF-TGVMLMYYALMYMSLADAVVI 129 (346)
T ss_pred HHHhhhh-hhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhh-hHHHHHHHHHhhcchhheEEE
Confidence 4444444 446899999988876666 22333333235567788899999995 888889999999999999999
Q ss_pred hhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCccc-ccccchhhhhhhcccCCCCCCCchh
Q 019825 78 INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-HSYSQAETAINVMHMHPTRKTERWT 156 (335)
Q Consensus 78 ~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (335)
..+.|+|+.+++|.++|||.++.+ ..+..+.+.|+.+++- .+.+.. .++.++ .+.-+...
T Consensus 130 tFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvR--PpFlFG~~t~g~~-----------~s~~~~~~ 190 (346)
T KOG4510|consen 130 TFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVR--PPFLFGDTTEGED-----------SSQVEYDI 190 (346)
T ss_pred EecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEec--CCcccCCCccccc-----------cccccccC
Confidence 999999999999999999999999 9999999999999983 222211 111111 11123445
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 236 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 236 (335)
.|.+.++.+++.-|...++.|++.|+. +......|..+++.+..++....... ..++ +...+|+..+.+|++ +.+
T Consensus 191 ~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig~--~~lP-~cgkdr~l~~~lGvf-gfi 265 (346)
T KOG4510|consen 191 PGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIGA--VQLP-HCGKDRWLFVNLGVF-GFI 265 (346)
T ss_pred CchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhccc--eecC-ccccceEEEEEehhh-hhH
Confidence 678999999999999999999998884 44555556666666665554433221 1221 134567788888884 578
Q ss_pred HHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 237 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
.+.+.+.++++..+..+++..+.+.+++.++++++|||.|+++.|.|+++++...++....|.
T Consensus 266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998887764443
No 16
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.82 E-value=2.9e-18 Score=158.33 Aligned_cols=262 Identities=16% Similarity=0.112 Sum_probs=205.0
Q ss_pred CchHHHHHHHHHHH-----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHH
Q 019825 16 PHCQCFIFRHLSYK-----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIAL 90 (335)
Q Consensus 16 ~p~~~~~~R~~~a~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~ 90 (335)
.|..+.+..+.... .....+.++.++..++.++..+.+.. ++..+.+.|++|++.....++.++.|+++++++.
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~ 109 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFF-LASVLSNAALKYISYPTQIVFKSSKPIPVMILGV 109 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHH-HHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHH
Confidence 47788888888777 11122223345566777888888884 9999999999999999999999999999999999
Q ss_pred HhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHH
Q 019825 91 PFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWA 170 (335)
Q Consensus 91 ~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a 170 (335)
+++|+|+++++ +.++++..+|+.+....+...... .+........|+++++++.++.+
T Consensus 110 l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~----------------~~~~~~~~~~G~~ll~~sl~~~a 167 (303)
T PF08449_consen 110 LILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS----------------SNSSSFSSALGIILLLLSLLLDA 167 (303)
T ss_pred HhcCccccHHH------HHHHHHHHhhHheeeecccccccc----------------cccccccchhHHHHHHHHHHHHH
Confidence 99999999998 999999999999988633211110 01112233459999999999999
Q ss_pred hHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHH--hccCCCccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 019825 171 SWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLA--TNRNHSAWS--FKGKIEIISVLYAGIVGSGLCYVGLTWCV 245 (335)
Q Consensus 171 ~~~~~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 245 (335)
...+.+++..+++. ++....++...++.+..++.... .+......+ ...+..+..++...+ .+.+++.+.++..
T Consensus 168 ~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~ 246 (303)
T PF08449_consen 168 FTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLI 246 (303)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 99999999987654 66888999999999988887776 322111111 112233444444444 6678888888999
Q ss_pred hccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccc
Q 019825 246 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 246 ~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
++.++...+++..++-+++++++++++++++++.+|+|.++++.|..+..+.++|+
T Consensus 247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999998776665
No 17
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.81 E-value=4e-18 Score=150.22 Aligned_cols=252 Identities=12% Similarity=0.090 Sum_probs=201.5
Q ss_pred HHhhhhcCCCchHHHHHHHHHHH-------hhccCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 019825 7 MMNNFLSAVPHCQCFIFRHLSYK-------LACRNSR----PKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFAC 75 (335)
Q Consensus 7 ~~k~~~~~~~p~~~~~~R~~~a~-------~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~ 75 (335)
..-+.+++.|+.++...|...+. ...|+.+ -..+++.+....+.+++. ..++..|.+|.++...-+++
T Consensus 24 ~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~~nW~lfiWAvn~g~~leaS 102 (293)
T COG2962 24 LYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-GLNWWLFIWAVNNGHVLEAS 102 (293)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-HHHHHHhheecCCCchhHHH
Confidence 34567889999999999999888 1122221 112456677777777777 59999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCch
Q 019825 76 AFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERW 155 (335)
Q Consensus 76 ~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (335)
+=+..+|++.++++++++|||+++.| ++++.++.+||.......|. ..
T Consensus 103 LGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~-lp------------------------- 150 (293)
T COG2962 103 LGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS-LP------------------------- 150 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC-Cc-------------------------
Confidence 99999999999999999999999998 99999999999998863331 11
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSG 235 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 235 (335)
..++.-++.|+.|...-|+. +- ++.+-.......-.+..+.+.++.+.+.......+...+..+...|. .|+
T Consensus 151 ----wval~la~sf~~Ygl~RK~~-~v--~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTa 222 (293)
T COG2962 151 ----WVALALALSFGLYGLLRKKL-KV--DALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTA 222 (293)
T ss_pred ----HHHHHHHHHHHHHHHHHHhc-CC--chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHH
Confidence 45566678999999886664 32 44666667777767777776666555442112124456777777887 678
Q ss_pred HHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 236 LCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++..+.+.+|+.++.+..-
T Consensus 223 vpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 223 VPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876543
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.80 E-value=1.3e-18 Score=157.19 Aligned_cols=239 Identities=13% Similarity=0.123 Sum_probs=189.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
+.++..++.+.-....++++.++..|+.+++++...++-++.-+||.+++.++..||++... ..++++++.|++
T Consensus 154 t~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GVi 227 (416)
T KOG2765|consen 154 TATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVI 227 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEE
Confidence 33455555544455557999999999999999999999999999999999999999999994 999999999999
Q ss_pred HHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHH---HHHHH
Q 019825 120 LLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA---ILSLF 196 (335)
Q Consensus 120 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~---~~~~~ 196 (335)
++..++....+ +....+..+|+++++++|+.||.|.++.|+...+......+.. +..++
T Consensus 228 iVt~~~s~~~~------------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLf 289 (416)
T KOG2765|consen 228 IVTMGDSKQNS------------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLF 289 (416)
T ss_pred EEEeccccccc------------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH
Confidence 99863321100 2335667899999999999999999999998766422233332 33344
Q ss_pred HHHHHHHHHHHhcc-CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCc
Q 019825 197 GAIQAAILCLATNR-NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHER 275 (335)
Q Consensus 197 ~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~ 275 (335)
..+++.|..+..+. ..+.+..+.......+++.++++++++=++|.++.-.++|..+.+-+.++.+.+++.+.++-|..
T Consensus 290 nllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~ 369 (416)
T KOG2765|consen 290 NLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKH 369 (416)
T ss_pred HHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCC
Confidence 44555555444332 33455555666777888889999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHhhhheeeccccch
Q 019825 276 LHIGSLLGSITVIIGLYILLWGKNKEM 302 (335)
Q Consensus 276 ~~~~~~~G~~lii~g~~l~~~~~~~~~ 302 (335)
+++.+++|.+.++.|.+++++..+...
T Consensus 370 ~S~~~iiGsi~Ifv~Fv~vn~~~~~~~ 396 (416)
T KOG2765|consen 370 PSALYIIGSIPIFVGFVIVNISSENSK 396 (416)
T ss_pred CCHHHHHHHHHHHHHHhheeccccccc
Confidence 999999999999999999987654443
No 19
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.75 E-value=1.8e-16 Score=145.23 Aligned_cols=244 Identities=16% Similarity=0.119 Sum_probs=175.3
Q ss_pred CCCchHHHHHHHHHHH-------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh-hhHHHH
Q 019825 14 AVPHCQCFIFRHLSYK-------LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN-MVPVIT 85 (335)
Q Consensus 14 ~~~p~~~~~~R~~~a~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pl~~ 85 (335)
+.++.++. |..++. ...+. ++...++.+..-++.|.+- ..++.+++.+.++++.+.+..+.+ +++++.
T Consensus 25 g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~g~l~G~~w-~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~ 100 (290)
T TIGR00776 25 GGPYSQTL--GTTFGALILSIAIAIFVL-PEFWALSIFLVGLLSGAFW-ALGQINQFKSMRYMGVSKTMPISTGFQLVGG 100 (290)
T ss_pred CCHHHHHH--HHHHHHHHHHHHHHHHhC-CcccccHHHHHHHHHHHHH-HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 67776665 665555 11232 2222244455555555554 688899999999999999998888 899999
Q ss_pred HHHHHHhccccccccccCCcce----eehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHH
Q 019825 86 FVIALPFGLETVDIKGISGKAK----VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIA 161 (335)
Q Consensus 86 ~lla~~~~~e~~~~~~~~~~~k----~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 161 (335)
.+.+.+++|||.+++ | ++|++++++|+.++...+++..+ +++..+...|.++
T Consensus 101 ~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~------------------~~~~~~~~~Gi~~ 156 (290)
T TIGR00776 101 TLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG------------------IKSEFNFKKGILL 156 (290)
T ss_pred HHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc------------------cccccchhhHHHH
Confidence 999999999999877 5 77888899998887532111000 0000223579999
Q ss_pred HHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHH---HHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHH
Q 019825 162 LTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSL---FGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY 238 (335)
Q Consensus 162 ~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 238 (335)
+++++++|+.|.+..|+.. + ++.+.++.+.. ++..+..+... .. ..+ .+...+..++ .|++ ..+++
T Consensus 157 ~l~sg~~y~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~~---~~-~~~--~~~~~~~~~~-~Gi~-~~ia~ 225 (290)
T TIGR00776 157 LLMSTIGYLVYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLGHI---LA-KPL--KKYAILLNIL-PGLM-WGIGN 225 (290)
T ss_pred HHHHHHHHHHHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHHHh---cc-cch--HHHHHHHHHH-HHHH-HHHHH
Confidence 9999999999999999863 3 45666444433 33333222211 11 111 1223344444 8887 69999
Q ss_pred HHHHHHhh-ccCceehhhhhhHHHHHHHHHHHHHhcCccchhHH----HHHHHHHHhhhheee
Q 019825 239 VGLTWCVK-KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGLYILLW 296 (335)
Q Consensus 239 ~~~~~~~~-~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~----~G~~lii~g~~l~~~ 296 (335)
.+|..+.+ +.+++.++.+...+|+.+.+++++++||..+..++ +|.++++.|+.+...
T Consensus 226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 99999999 99999999999999999999999999999999999 999999999987643
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.69 E-value=1.3e-16 Score=145.35 Aligned_cols=253 Identities=11% Similarity=0.037 Sum_probs=200.2
Q ss_pred CchHHHHHHHHHHH----h--hc--cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHH
Q 019825 16 PHCQCFIFRHLSYK----L--AC--RNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFV 87 (335)
Q Consensus 16 ~p~~~~~~R~~~a~----~--~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~l 87 (335)
-|..+..++...+. . .. .+..+..++..+...+.+|++.. ++..+-..++.+.+++.++.+..++|+++.+
T Consensus 47 ~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~-~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl 125 (316)
T KOG1441|consen 47 FPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFC-ISHVLGNVSLSYVPVSFYQTIKALMPPFTVL 125 (316)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHH-HHHHhcchhhhccchhHHHHHHhhcchhHHH
Confidence 46666666666665 1 11 11122225578899999999994 9999999999999999999999999999999
Q ss_pred HHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHH
Q 019825 88 IALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTL 167 (335)
Q Consensus 88 la~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~ 167 (335)
+++++.+|+.+... +..++....|+.+.... +.+-+..|.+.++++.+
T Consensus 126 ~~~~~~~~~~s~~~------~lsL~piv~GV~ias~~--------------------------e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 126 LSVLLLGKTYSSMT------YLSLLPIVFGVAIASVT--------------------------ELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhCCCCcceE------EEEEEEeeeeEEEeeec--------------------------cccccHHHHHHHHHHHH
Confidence 99999999999997 99999999999998741 13344589999999999
Q ss_pred HHHhHHHHHHHhhc--cC-CCchhHHHHHHHHHHHHHH-HHHHHhccCCC---cccccchhHHHHHHHHHHHHHHHHHHH
Q 019825 168 LWASWFPIQSYIGK--RY-PCKYSSTAILSLFGAIQAA-ILCLATNRNHS---AWSFKGKIEIISVLYAGIVGSGLCYVG 240 (335)
Q Consensus 168 ~~a~~~~~~k~~~~--~~-~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~~l~~~g~~~~~~~~~~ 240 (335)
..+..+++.|++.+ ++ -++++...++.-.+.+.++ |+....+++.. .....+.. ...+++.. +........
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s-v~~f~~Nls 251 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNS-VLAFLLNLS 251 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHH-HHHHHHHHH
Confidence 99999999999984 22 2779999999999999999 87776555332 11111122 33333333 344555667
Q ss_pred HHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccchh
Q 019825 241 LTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 303 (335)
Q Consensus 241 ~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~~ 303 (335)
.+..+.+++|...++.+...-++.++.++++|+++.++.+..|+++.++|++++.+.|.++++
T Consensus 252 ~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 252 AFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 778999999999999999999999999999999999999999999999999999887776654
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3.3e-14 Score=121.19 Aligned_cols=253 Identities=13% Similarity=0.084 Sum_probs=195.2
Q ss_pred hHHHHHHHHHHH-----hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHh
Q 019825 18 CQCFIFRHLSYK-----LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPF 92 (335)
Q Consensus 18 ~~~~~~R~~~a~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~ 92 (335)
..++++++..-. ++..++..+.+...-+.+...++-. .+++...+.|+||+|--...+-.++-|+-+++++.++
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~ 132 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF 132 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh
Confidence 344555555444 2222223334444445556666666 4889999999999999999999999999999999999
Q ss_pred ccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhH
Q 019825 93 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASW 172 (335)
Q Consensus 93 ~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~ 172 (335)
.+.+.+++. .++++..++|+.+... +..... +.++.....|.++.+++-.+-+..
T Consensus 133 ~~KsY~w~k------Y~cVL~IV~GValFmY-K~~Kv~------------------g~e~~t~g~GElLL~lSL~mDGlT 187 (337)
T KOG1580|consen 133 AHKSYHWRK------YCCVLMIVVGVALFMY-KENKVG------------------GAEDKTFGFGELLLILSLAMDGLT 187 (337)
T ss_pred hcccccHHH------HHHHHHHHHHHHHhhc-cccccC------------------CCcccccchHHHHHHHHHHhcccc
Confidence 999999996 9999999999999985 422211 233556668999999999999999
Q ss_pred HHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHhccCCC--cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 019825 173 FPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHS--AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKG 249 (335)
Q Consensus 173 ~~~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 249 (335)
...+.++.+.|. ....++++.++++.+.+..-.++.+.-.. .+..-.+..|+-+...++ ++.+++++.+.-+...+
T Consensus 188 g~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~Fg 266 (337)
T KOG1580|consen 188 GSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFG 266 (337)
T ss_pred hhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhC
Confidence 999988876653 55778899999999988777666543211 111112345666667776 78999999999999999
Q ss_pred ceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 250 PVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 250 ~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
|..-+++..+.-.++++.++++++.+++.+||+|..+++.+...=...
T Consensus 267 PLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 267 PLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred CeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 999999999999999999999999999999999999999998765433
No 22
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.56 E-value=5.7e-13 Score=118.68 Aligned_cols=229 Identities=13% Similarity=0.125 Sum_probs=166.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
++++..++.+.+++. .+.+.+.++++++++++..+++..+-.++|++++++++|+|++++| |.++.+.++|+.
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence 467788889999998 4999999999999999999999999999999999999999999998 999999999999
Q ss_pred HHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCC-CchhHHHHHHHHHH
Q 019825 120 LLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP-CKYSSTAILSLFGA 198 (335)
Q Consensus 120 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~ 198 (335)
++-.. +..... .++.. ..+.+....+...|.++.++++++.++..++.++..|+.. +...........+.
T Consensus 86 lv~~~-~~~~~~-~~~~~-------~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi 156 (244)
T PF04142_consen 86 LVQLS-SSQSSD-NSSSS-------SVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGI 156 (244)
T ss_pred eeecC-Cccccc-ccccc-------ccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 97642 211100 00000 0000122445679999999999999999999999998753 33333444456666
Q ss_pred HHHHHHHHHhccCC-CcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccc
Q 019825 199 IQAAILCLATNRNH-SAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLH 277 (335)
Q Consensus 199 i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~ 277 (335)
++.++.....+... ..........+ ..+..++..+.+=.+....+|+.+...=+.......+++.++++++|+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~g~f~G~~~--~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s 234 (244)
T PF04142_consen 157 LFNLLALLLSDGSAISESGFFHGYSW--WVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPS 234 (244)
T ss_pred HHHHHHHhcccccccccCCchhhcch--HHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 66655544433321 11111111112 1222333445555566778899999999999999999999999999999999
Q ss_pred hhHHHHHHH
Q 019825 278 IGSLLGSIT 286 (335)
Q Consensus 278 ~~~~~G~~l 286 (335)
....+|..+
T Consensus 235 ~~f~lg~~~ 243 (244)
T PF04142_consen 235 LSFLLGAAL 243 (244)
T ss_pred hHHhhheec
Confidence 999999765
No 23
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.55 E-value=1.6e-13 Score=106.23 Aligned_cols=136 Identities=17% Similarity=0.174 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
..++++++++.+++..++.|--.++ .||...++.+..+..+.+..+.+..++.... ...+...|..+...|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHH-HHHHH
Confidence 5689999999999999999987776 4678889999999888888777765542222 1125567888888885 88999
Q ss_pred HHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 238 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+.+|++++|...++++..+.-++|+++.+++++++||+++..+++|.+++++|.+++..
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988754
No 24
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.52 E-value=5.7e-15 Score=127.25 Aligned_cols=227 Identities=17% Similarity=0.133 Sum_probs=178.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
-+..|+.+++++++-. -++++...|.||++...++++.+-..+.+.+++|+++|.|.++-+ +.|+++|+.|+.
T Consensus 74 ~~~~~~hYilla~~DV-EaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~Gvv 146 (336)
T KOG2766|consen 74 IKAKWRHYILLAFVDV-EANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVV 146 (336)
T ss_pred HHHHHHHhhheeEEee-cccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceE
Confidence 3466777899998885 778889999999999999999998888899999999999999996 999999999999
Q ss_pred HHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHH
Q 019825 120 LLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAI 199 (335)
Q Consensus 120 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i 199 (335)
+++..+ .. .+....+.+...|++++++++-+||..++....+.|+. +.........++|++
T Consensus 147 mvV~sD-V~-----------------agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaI 207 (336)
T KOG2766|consen 147 MVVFSD-VH-----------------AGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAI 207 (336)
T ss_pred EEEEee-ec-----------------cccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHH
Confidence 988522 11 11133456677999999999999999999999999884 557888888899999
Q ss_pred HHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchh
Q 019825 200 QAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG 279 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~ 279 (335)
+..+-.++..+...... +.......+ ...++..+-|.+....+|..+++..++-..++-.++.++ -.||-..+|.
T Consensus 208 IsaIQ~i~~~~~~~tl~--w~~~i~~yl-~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL 282 (336)
T KOG2766|consen 208 ISAIQFIFERHHVSTLH--WDSAIFLYL-RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL 282 (336)
T ss_pred HHHHHHhhhccceeeEe--ehHHHHHHH-HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh
Confidence 98888554333322222 222222221 233355566666667888999999999999999999988 5688889999
Q ss_pred HHHHHHHHHHhhhheeec
Q 019825 280 SLLGSITVIIGLYILLWG 297 (335)
Q Consensus 280 ~~~G~~lii~g~~l~~~~ 297 (335)
..+..+.+..|.+++.-+
T Consensus 283 Y~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 283 YFLAFATIATGLIIYSTR 300 (336)
T ss_pred hHHHHHHHHHhhEEeecc
Confidence 999999999999988433
No 25
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.52 E-value=4.4e-13 Score=118.69 Aligned_cols=259 Identities=12% Similarity=0.069 Sum_probs=200.2
Q ss_pred CchHHHHHHHHHHH------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHH
Q 019825 16 PHCQCFIFRHLSYK------LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIA 89 (335)
Q Consensus 16 ~p~~~~~~R~~~a~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla 89 (335)
++..+.+.+.+.+. +.++++. ...++.|..+...+..+. ....+.+.|++|++--.-.+-.++--+-+++..
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn~-~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg 127 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTNT-LSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG 127 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHhh-cchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence 45566666666666 2233333 334467778888888884 899999999999998888888887777789999
Q ss_pred HHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHH
Q 019825 90 LPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLW 169 (335)
Q Consensus 90 ~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~ 169 (335)
.++.|+|.+..+ .....+.-.|+.+..+.+..+... +..+.+...|+.++...-+.-
T Consensus 128 ~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~s~~-----------------~~g~~ns~~G~~Ll~~~L~fD 184 (327)
T KOG1581|consen 128 TLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSDSSS-----------------KSGRENSPIGILLLFGYLLFD 184 (327)
T ss_pred HHHhcCccCcHH------HHHHHHHHhheeeEEEecCCCCcc-----------------ccCCCCchHhHHHHHHHHHHH
Confidence 999999999997 888888888988877543222111 334456779999999999999
Q ss_pred HhHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHhccCCCccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019825 170 ASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWS--FKGKIEIISVLYAGIVGSGLCYVGLTWCVK 246 (335)
Q Consensus 170 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 246 (335)
+..+..+.++.+++. ++..++++.++++.+......+..+...+... ...+..+.-++.... ++++++.+.++-++
T Consensus 185 gfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~ 263 (327)
T KOG1581|consen 185 GFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIE 263 (327)
T ss_pred hhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHh
Confidence 999999999988654 67889999999999988777554443222111 112233444444454 55789999999999
Q ss_pred ccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecccc
Q 019825 247 KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 300 (335)
Q Consensus 247 ~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~ 300 (335)
+.++.....++.+.-+++++++.+++|.++++.||+|..+++.|+.+-.+.+++
T Consensus 264 ~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 264 RFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999988776666
No 26
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=5.9e-13 Score=105.88 Aligned_cols=125 Identities=22% Similarity=0.333 Sum_probs=107.2
Q ss_pred HHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019825 167 LLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVK 246 (335)
Q Consensus 167 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 246 (335)
++||.+.+..|+..++. ++....++++..+.+ .++........+ ....+...+...++.+++++++++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 46899999999998884 679999999999998 666666554433 22225566778888888888999999999999
Q ss_pred ccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 247 KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 247 ~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
+.+++.++.+.+++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998753
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.40 E-value=5.5e-12 Score=111.76 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=169.9
Q ss_pred CCCHHHH-HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHH
Q 019825 38 KLTLRIL-FCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIG 116 (335)
Q Consensus 38 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~ 116 (335)
..+|++. ++....|+.. ++..++.+++++|++.+...+..+..++|+.+++.+|.-||+++.- ..-+.+..+
T Consensus 77 ~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L------~l~v~lI~~ 149 (349)
T KOG1443|consen 77 VLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWAL------VLIVLLIAV 149 (349)
T ss_pred CCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHH------HHHHHHHhh
Confidence 3455544 4555777777 5999999999999999999999999999999999999999999985 666666667
Q ss_pred hHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCC----CchhHHHH
Q 019825 117 GAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP----CKYSSTAI 192 (335)
Q Consensus 117 Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~----~~~~~~~~ 192 (335)
|+.+.+. +. ++-...|..+...++++-++-....+.+.++.+ +|+...+.
T Consensus 150 Glflft~-Ks-------------------------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~ 203 (349)
T KOG1443|consen 150 GLFLFTY-KS-------------------------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFH 203 (349)
T ss_pred heeEEEe-cc-------------------------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHH
Confidence 7777763 43 233458999999999998888877777766533 67888888
Q ss_pred HHHHHHHHHHHHHHHhccCCC-----cccccch-hHHHHHHHHHHHHHHHHHH---HHHHHhhccCceehhhhhhHHHHH
Q 019825 193 LSLFGAIQAAILCLATNRNHS-----AWSFKGK-IEIISVLYAGIVGSGLCYV---GLTWCVKKKGPVFTAAFSPLVQIM 263 (335)
Q Consensus 193 ~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~-~~~~~l~~~g~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~~pv~ 263 (335)
..-...+.++|..+..++... .++..+. ..+..+...++ ++.+++. +-+..+.+++....++.....-+.
T Consensus 204 l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~ 282 (349)
T KOG1443|consen 204 LQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVC 282 (349)
T ss_pred hhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHH
Confidence 888888888888887766321 2222121 22333333332 3333333 233567788999999999999999
Q ss_pred HHHHHHHHhcCccchhHHHHHHHHHHhhhhe
Q 019825 264 AAMFDIPLLHERLHIGSLLGSITVIIGLYIL 294 (335)
Q Consensus 264 ~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~ 294 (335)
+.+++..+.+++++...|+|..+...|+.+.
T Consensus 283 tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 283 TLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988
No 28
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=1e-10 Score=106.50 Aligned_cols=238 Identities=13% Similarity=0.079 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 41 LRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 41 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
+++.....+.+++.. +.+-++|.++.+.+++..++..++-.+.|+++..+++++|++++| |.++++.++|+.+
T Consensus 89 ~~~~lk~~vPa~iYa-lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~ 161 (345)
T KOG2234|consen 89 PRETLKVSVPALIYA-LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVAL 161 (345)
T ss_pred hHHHHHHHHHHHHHH-HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHH
Confidence 445666777777874 888899999999999999999999999999999999999999998 9999999999999
Q ss_pred HHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCch-hHHHHHHHHHHH
Q 019825 121 LTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKY-SSTAILSLFGAI 199 (335)
Q Consensus 121 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~-~~~~~~~~~~~i 199 (335)
+=....+..+. +.....++...|....+.++++.+...++.++++|+-..+. .-+.-..+++.+
T Consensus 162 vQ~~~~~~~~a---------------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~ 226 (345)
T KOG2234|consen 162 VQLPSLSPTGA---------------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGIL 226 (345)
T ss_pred HhccCCCCCCc---------------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 75311211110 00223456679999999999999999999999988633222 223333355555
Q ss_pred HHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchh
Q 019825 200 QAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIG 279 (335)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~ 279 (335)
+.+...+..+.....|.. --..|-...+..++..+.+=.+...-+|+.+-..=+....+..+++.+.++.+++-+||..
T Consensus 227 f~~l~~~~~d~~~i~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~ 305 (345)
T KOG2234|consen 227 FNLLTILLQDGEAINEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLY 305 (345)
T ss_pred HHHHHHhhccccccccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 554444444332221110 0011112222222333444444555667777777677777899999999999999999999
Q ss_pred HHHHHHHHHHhhhheeeccccc
Q 019825 280 SLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 280 ~~~G~~lii~g~~l~~~~~~~~ 301 (335)
..+|..+++..+.++...++++
T Consensus 306 F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 306 FLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHHHHHhhcCCccc
Confidence 9999999999999998655555
No 29
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.39 E-value=3.6e-11 Score=107.84 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=194.5
Q ss_pred HHHHHHH-------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccc
Q 019825 23 FRHLSYK-------LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLE 95 (335)
Q Consensus 23 ~R~~~a~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e 95 (335)
++.+... ....-+.++++++..+.++...++.. ++...-..+++|.+.....++.+..|+++++....++|.
T Consensus 49 ~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~-~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~ 127 (314)
T KOG1444|consen 49 LQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFV-GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGK 127 (314)
T ss_pred HHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHH-HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCc
Confidence 6666655 22233456778999999999999995 899999999999999999999999999999999999999
Q ss_pred cccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHH
Q 019825 96 TVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPI 175 (335)
Q Consensus 96 ~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~ 175 (335)
+++... +.++...++|..+.... . ..-...|+.+++...++-+.+.+.
T Consensus 128 ~~~~~v------~~Sv~~m~~~s~~~~~~-d-------------------------~sf~~~gY~w~~~n~~~~a~~~v~ 175 (314)
T KOG1444|consen 128 RPSNKV------WASVFAMIIGSVAAAFT-D-------------------------LSFNLRGYSWALANCLTTAAFVVY 175 (314)
T ss_pred CchhhH------HHHHHHHHHHHHhhccc-c-------------------------ceecchhHHHHHHHHHHHHHHHHH
Confidence 999987 88888888877776531 1 122235999999999999999999
Q ss_pred HHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHhccC------CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019825 176 QSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRN------HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKK 248 (335)
Q Consensus 176 ~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 248 (335)
.|+..+... +.+...+|..+.+...+....++++.- ...|. ....+..+...++++.++.|.. .++.+..
T Consensus 176 ~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~--~~~~~~~~~lScv~gf~isy~s-~~ct~~~ 252 (314)
T KOG1444|consen 176 VKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWS--DSSVLVVMLLSCVMGFGISYTS-FLCTRVN 252 (314)
T ss_pred HHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccccc--chhHHHHHHHHHHHHHHHHHHH-HHHHhhc
Confidence 999876422 457788999999888887777665531 11122 3455777788888776666655 4899999
Q ss_pred CceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccchh
Q 019825 249 GPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQ 303 (335)
Q Consensus 249 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~~ 303 (335)
+++..++.+..+-..+.+...++++++.++...+|..+-++|-+++++.+.++++
T Consensus 253 SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 253 SATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK 307 (314)
T ss_pred cccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence 9999999998888888888888889999999999999999999999876655543
No 30
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.29 E-value=2.5e-12 Score=112.16 Aligned_cols=259 Identities=15% Similarity=0.073 Sum_probs=196.8
Q ss_pred CchHHHHHHHHHHH-------hh-----ccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhh
Q 019825 16 PHCQCFIFRHLSYK-------LA-----CRN--SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMV 81 (335)
Q Consensus 16 ~p~~~~~~R~~~a~-------~~-----~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~ 81 (335)
-|..+.+.+++... .. ++. ...+++.+..+..+...+... +...+-.++++|++++...+-..+.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee-eehhccceehhhcceEEEEeccchh
Confidence 46667777776665 00 111 122356677777777777774 7778889999999999999999999
Q ss_pred HHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHH
Q 019825 82 PVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIA 161 (335)
Q Consensus 82 Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 161 (335)
.+|+.++.++++|+|.+... ..+..+.+.|..+=+..+ +..+.-...|.++
T Consensus 139 tvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvdqE-----------------------~~~~~ls~~Gvif 189 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVDQE-----------------------GSTGTLSWIGVIF 189 (347)
T ss_pred hhHHHHhHHhhccccccccc------ceeehhheehheeccccc-----------------------cccCccchhhhHH
Confidence 99999999999999999986 777777777766644211 1123344589999
Q ss_pred HHHHHHHHHhHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHHhccCCC--cc-cccchhHHHHHHHHHHHHHHHH
Q 019825 162 LTVGTLLWASWFPIQSYIGKR-YPCKYSSTAILSLFGAIQAAILCLATNRNHS--AW-SFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 162 ~l~aa~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~-~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
.+.++++-|+..+..|+.... ....+..+++.+..+.++++|...+.+.-.. .+ .......|..+...|+++..++
T Consensus 190 GVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mg 269 (347)
T KOG1442|consen 190 GVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMG 269 (347)
T ss_pred HHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999986543 2255778899999999999999887544211 11 1224466777778888776666
Q ss_pred HHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccchhhh
Q 019825 238 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQNC 305 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~~~~ 305 (335)
|.. .+=+|-++|.+-.+-....-..-.++++.+.+|.-+..-|-|-++++.|...+.+.|+.+++++
T Consensus 270 yvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~ 336 (347)
T KOG1442|consen 270 YVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA 336 (347)
T ss_pred hee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence 654 3667888998888888888888889999999999999999999999999999998877766554
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.21 E-value=5.4e-11 Score=94.44 Aligned_cols=112 Identities=20% Similarity=0.357 Sum_probs=97.9
Q ss_pred hhHHhhhhcCCCchHHHHHHHHHHH------hhccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 019825 5 MTMMNNFLSAVPHCQCFIFRHLSYK------LACRN-SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAF 77 (335)
Q Consensus 5 ~~~~k~~~~~~~p~~~~~~R~~~a~------~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i 77 (335)
....|...++.||....++|+..+. ....+ +....+++++...+..+.+....++.++++++++++++.++.+
T Consensus 7 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 86 (126)
T PF00892_consen 7 SVFSKKLLKKISPLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSIL 86 (126)
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHH
Confidence 3456888889999999999999988 11222 2356778889999999998667999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 78 INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 78 ~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
.++.|+++.+++++++||++++++ ++|+++++.|+.++.
T Consensus 87 ~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 87 QYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 999999999999999999999998 999999999998875
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.20 E-value=4.9e-10 Score=92.71 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhcc------CCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccc--------c-chhH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKR------YPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSF--------K-GKIE 222 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~-~~~~ 222 (335)
|.++++.+.++.|++.++.|+..++ ..++.....+....+.+.++|..+..+........ . +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999998776 34789999999999999999998877653211100 0 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 223 IISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 223 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+..++..|++ ........+..+++++|...++...+..+...+++++++||+++..+++|.++.+.|.++++|
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5556666664 456777778999999999999999999999999999999999999999999999999998864
No 33
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.17 E-value=1.4e-10 Score=98.48 Aligned_cols=235 Identities=12% Similarity=0.075 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 41 LRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 41 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
.++.+.++...++.. ...+.--.+++|.+.....++.++..+.++....+++|.|++..+ ..+.++.+..-..
T Consensus 65 ~t~aK~WfpiSfLLv-~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~v 137 (309)
T COG5070 65 LTKAKKWFPISFLLV-VMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVV 137 (309)
T ss_pred hhhhhhhcCHHHHHH-HHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHH
Confidence 455666666776664 666667789999999999999999999999999999999998887 5555444443332
Q ss_pred HHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhcc-CCCchhHHHHHHHHHHH
Q 019825 121 LTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKR-YPCKYSSTAILSLFGAI 199 (335)
Q Consensus 121 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~i 199 (335)
-.. ++ ++...-.....+.|++++...++.-+.+....|+..+- .-.....++|..+.+..
T Consensus 138 a~w--~D-----------------~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslP 198 (309)
T COG5070 138 ATW--GD-----------------QQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLP 198 (309)
T ss_pred hcc--ch-----------------hhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHH
Confidence 221 11 00001122345579999999999999999999887552 11347789999999999
Q ss_pred HHHHHHHHhcc-CCCcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccc
Q 019825 200 QAAILCLATNR-NHSAW-SFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLH 277 (335)
Q Consensus 200 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~ 277 (335)
+++.+.++.+. ++... ...+.....++...|+ +++.--++-.|+++-++++..+++..++-.-..+-|.++|+|+.+
T Consensus 199 iL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~n 277 (309)
T COG5070 199 ILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVN 277 (309)
T ss_pred HHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchh
Confidence 99888877665 22211 1113334566677777 445555667899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhheeeccccch
Q 019825 278 IGSLLGSITVIIGLYILLWGKNKEM 302 (335)
Q Consensus 278 ~~~~~G~~lii~g~~l~~~~~~~~~ 302 (335)
...+..+.+-...-.++...+.+++
T Consensus 278 f~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 278 FLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888776655555555444433
No 34
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.15 E-value=5.5e-10 Score=97.50 Aligned_cols=250 Identities=13% Similarity=0.093 Sum_probs=188.8
Q ss_pred chHHHHHHHHHHH-------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHH
Q 019825 17 HCQCFIFRHLSYK-------LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIA 89 (335)
Q Consensus 17 p~~~~~~R~~~a~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla 89 (335)
.|.+++.+++... ..++.+++..+ |+.+..++.+.. +.+++..-++.|.+--.-.++.++--+=+.+.+
T Consensus 75 GWylTlvQf~~Ysg~glie~~~~~~k~r~iP---~rtY~~la~~t~-gtmGLsn~SlgYLNYPtQviFKccKliPVmigg 150 (367)
T KOG1582|consen 75 GWYLTLVQFLVYSGFGLIELQLIQTKRRVIP---WRTYVILAFLTV-GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGG 150 (367)
T ss_pred chHHHHHHHHHHHhhhheEEEeecccceecc---hhHhhhhHhhhh-hccccCcCccccccCcHHHHHHhhhhhhhhhee
Confidence 3667788887774 22333444444 666677777774 888888999999887766777776666667888
Q ss_pred HHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHH
Q 019825 90 LPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLW 169 (335)
Q Consensus 90 ~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~ 169 (335)
.++-+.|....+ +++..+..+|..+..+.|. ..+.+-+..|+.+.-.+-++-
T Consensus 151 ifIqGkRY~v~d------~~aA~lm~lGli~FTLADs----------------------~~sPNF~~~Gv~mIsgALl~D 202 (367)
T KOG1582|consen 151 IFIQGKRYGVHD------YIAAMLMSLGLIWFTLADS----------------------QTSPNFNLIGVMMISGALLAD 202 (367)
T ss_pred eeeccccccHHH------HHHHHHHHHHHHhhhhccc----------------------ccCCCcceeeHHHHHHHHHHH
Confidence 888899999998 9999999999999887332 222455568999888888888
Q ss_pred HhHHHHHHHhhccCC-CchhHHHHHHHHHHHHHHHHHHHhccCCCcccc---cchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 019825 170 ASWFPIQSYIGKRYP-CKYSSTAILSLFGAIQAAILCLATNRNHSAWSF---KGKIEIISVLYAGIVGSGLCYVGLTWCV 245 (335)
Q Consensus 170 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 245 (335)
|.-.-++.+..+.++ +...+.++...++.+.++......+.-.+.|+. ++........+... .+.++.......+
T Consensus 203 A~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI 281 (367)
T KOG1582|consen 203 AVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALI 281 (367)
T ss_pred HHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHH
Confidence 887777787777654 456778888899998888777776654445442 23223444444443 4556666667778
Q ss_pred hccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 246 KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 246 ~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+..++..+..+....-.+++++++++|..++|....-|..+++.|+++-.+.++
T Consensus 282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 889999999999999999999999999999999999999999999999887763
No 35
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.14 E-value=8.1e-10 Score=101.71 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=109.7
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCccc--ccchhHHHHHHHHHH
Q 019825 154 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS--FKGKIEIISVLYAGI 231 (335)
Q Consensus 154 ~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~ 231 (335)
+...|.+++++++++|+...+..|.. .+ .++....++++.++.+.+.++.....+ ..... ..+...+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHHH
Confidence 34589999999999999999999875 44 367999999999998877776554321 11100 00122222 233555
Q ss_pred HHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 232 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
+..+..+.++++++++.++..++++.++.|++..+++++++||+++..+++|.++.+.|++++.
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999998875
No 36
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.13 E-value=1.3e-08 Score=90.74 Aligned_cols=224 Identities=17% Similarity=0.168 Sum_probs=158.9
Q ss_pred CCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh-hhHHHHHHHHHHhccccccccccCCccee---e
Q 019825 36 RPKLT--LRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN-MVPVITFVIALPFGLETVDIKGISGKAKV---V 109 (335)
Q Consensus 36 ~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pl~~~lla~~~~~e~~~~~~~~~~~k~---~ 109 (335)
++..+ .+.+...++.|++= ...+...+.+.++.+.+.+..+.. ++-+.+.+++.++++|..+..+ |. .
T Consensus 35 ~p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~-----~~~G~~ 108 (269)
T PF06800_consen 35 QPAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQ-----KIIGFL 108 (269)
T ss_pred CCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcch-----HHHHHH
Confidence 34444 48888888888887 599999999999999999998865 8889999999999999998776 33 3
Q ss_pred hHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhH
Q 019825 110 GTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSS 189 (335)
Q Consensus 110 g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~ 189 (335)
++++.++|+.+....+... +. .++..+...|....+++++.|..|.++.|... .++...
T Consensus 109 Al~liiiGv~lts~~~~~~-~~-----------------~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~---~~~~~~ 167 (269)
T PF06800_consen 109 ALVLIIIGVILTSYQDKKS-DK-----------------SSSKSNMKKGILALLISTIGYWIYSVIPKAFH---VSGWSA 167 (269)
T ss_pred HHHHHHHHHHHhccccccc-cc-----------------cccccchhhHHHHHHHHHHHHHHHHHHHHhcC---CChhHh
Confidence 5566667776665422111 00 12244566899999999999999999977743 245665
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHH
Q 019825 190 TAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDI 269 (335)
Q Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~ 269 (335)
.+-+..-..+..+.+..+. ++. .. ....|.. +..|++- .++..++..+.++.+.+..=.+.-+.++++.+.+.
T Consensus 168 ~lPqaiGm~i~a~i~~~~~-~~~-~~---~k~~~~n-il~G~~w-~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI 240 (269)
T PF06800_consen 168 FLPQAIGMLIGAFIFNLFS-KKP-FF---EKKSWKN-ILTGLIW-GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGI 240 (269)
T ss_pred HHHHHHHHHHHHHHHhhcc-ccc-cc---ccchHHh-hHHHHHH-HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhh
Confidence 5555444333333333322 111 11 1222333 3344433 57788889999999999999999999999999999
Q ss_pred HHhcCccchh----HHHHHHHHHHhhhh
Q 019825 270 PLLHERLHIG----SLLGSITVIIGLYI 293 (335)
Q Consensus 270 ~~~ge~~~~~----~~~G~~lii~g~~l 293 (335)
+++||+=+.. .++|.++++.|.++
T Consensus 241 ~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 241 FILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred eEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999987654 45788888877654
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.13 E-value=4.7e-11 Score=92.68 Aligned_cols=108 Identities=15% Similarity=0.221 Sum_probs=95.5
Q ss_pred HhhhhcCCCchHHHHHHHHHHH------hhccCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHh
Q 019825 8 MNNFLSAVPHCQCFIFRHLSYK------LACRNSRP---KLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFI 78 (335)
Q Consensus 8 ~k~~~~~~~p~~~~~~R~~~a~------~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~ 78 (335)
-|+.+++++|...++.|..... ....++.. ..+.|.|..+.+.|+.+ .+.+.+||.|++...++....+.
T Consensus 22 ~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glswl~Yf~ALk~G~as~VvPld 100 (140)
T COG2510 22 AKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSWLLYFRALKKGKASRVVPLD 100 (140)
T ss_pred HHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHHHHHHHHHhcCCcceEEEcc
Confidence 4889999999999999999887 22233332 24789999999999888 59999999999999999999999
Q ss_pred hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 79 NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 79 ~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
.+.|+++.+++++++|||++..+ ++|+.+..+|+.++.
T Consensus 101 k~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 101 KTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred cccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 99999999999999999999998 999999999988764
No 38
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.12 E-value=1.7e-09 Score=94.92 Aligned_cols=223 Identities=15% Similarity=0.179 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcC
Q 019825 47 LFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKG 126 (335)
Q Consensus 47 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~ 126 (335)
.+.-+++-. .+..+.|.|+.+++++.-+++.....+|+.+++.-+++++++.++ |.|+....+|++++...+
T Consensus 89 fl~Pal~Di-~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d- 160 (372)
T KOG3912|consen 89 FLPPALCDI-AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLD- 160 (372)
T ss_pred ecChHHHHH-hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeee-
Confidence 344667774 777889999999999999999999999999999999999999998 999999999999886421
Q ss_pred CCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHH
Q 019825 127 MPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRY-PCKYSSTAILSLFGAIQAAILC 205 (335)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~i~~~~~~ 205 (335)
.... + .|-..-++...|+++.+.+-+.-|+..++.+|..+++ .+|.....|..+++.+.+..++
T Consensus 161 ~~~~--~-------------~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~ 225 (372)
T KOG3912|consen 161 VHLV--T-------------DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLA 225 (372)
T ss_pred cccc--c-------------CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHH
Confidence 1110 0 0122235667899999999999999999988777653 4789999999988865544443
Q ss_pred HHh----cc-----CCCc-ccc-------cchhHHHHHHHHHHHHHHHHHHHHH----HHhhccCceehhhhhhHHHHHH
Q 019825 206 LAT----NR-----NHSA-WSF-------KGKIEIISVLYAGIVGSGLCYVGLT----WCVKKKGPVFTAAFSPLVQIMA 264 (335)
Q Consensus 206 ~~~----~~-----~~~~-~~~-------~~~~~~~~l~~~g~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~pv~~ 264 (335)
... .+ ++.. +.. ......+.+...|. ..+..+++ .--|..+++.-.++..+...+-
T Consensus 226 i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~I 302 (372)
T KOG3912|consen 226 IPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVI 302 (372)
T ss_pred HHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhh
Confidence 322 11 1111 100 00011122222232 22332222 3456788899999999999999
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 265 AMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 265 ~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
.+++..+..|.+...|+.|.++.+.|+.++.
T Consensus 303 Wv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 303 WVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999885
No 39
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.10 E-value=2.3e-09 Score=97.94 Aligned_cols=133 Identities=15% Similarity=0.137 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHH
Q 019825 159 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY 238 (335)
Q Consensus 159 ~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 238 (335)
.++.++++++||...+..|+..++ .++ ..++....+.+.+.|+...... ...++..+...+ ..+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPATFW-LLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcchhhH-HHHHHHHHHHHHHH
Confidence 467899999999999999987766 232 3566666677777776654311 122332233333 34444445778889
Q ss_pred HHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 239 VGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
.++++++++.+++.++.+.+++|+++.+++++++||+++..+++|.++++.|+++...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 40
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.09 E-value=8e-11 Score=102.98 Aligned_cols=258 Identities=12% Similarity=0.068 Sum_probs=173.7
Q ss_pred hHHHHHHHHHHH---hhccCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHhhhhHHHHHHHH
Q 019825 18 CQCFIFRHLSYK---LACRNS----RPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQY-TSATFACAFINMVPVITFVIA 89 (335)
Q Consensus 18 ~~~~~~R~~~a~---~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~a~~i~~~~Pl~~~lla 89 (335)
..++|.++++-. +....+ +++.+.+++. ..-.+. +..+.+-++++++ .+...-.++.+-.++.+++++
T Consensus 34 NLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~---i~V~mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g 109 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYA---ITVAMF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILG 109 (330)
T ss_pred eehHHHHHHHHHHhceeeeccccccCCCCchhhhh---eehhee-eeeeeeccceeeecccceEEEEEecCcHHHHHHHH
Confidence 556677777666 222111 2444544443 333333 3677888899988 466666777888999999999
Q ss_pred HHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHH
Q 019825 90 LPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLW 169 (335)
Q Consensus 90 ~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~ 169 (335)
|++.|+|.+.+| +.++.+..+|+.+..+.+..+... ..+.. ++-........+..|+.+...+-+..
T Consensus 110 ~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-~~~~l------~~~~~~~~~~~w~iGi~lL~~al~~s 176 (330)
T KOG1583|consen 110 WILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-KLSGL------DSGSAQSDFFWWLIGIALLVFALLLS 176 (330)
T ss_pred HHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-hhccc------ccCcccccchHHHHHHHHHHHHHHHH
Confidence 999999999998 999999999999998765544432 00000 00000122446788999999999988
Q ss_pred HhHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHHHHHH--h-----ccCC----CcccccchhHHHHHHHHHHHHHHHH
Q 019825 170 ASWFPIQSYIGKRY-PCKYSSTAILSLFGAIQAAILCLA--T-----NRNH----SAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 170 a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~--~-----~~~~----~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
|...+.++..-++| .++-...+|..+.+...++...-- . ...+ +.....-+..|..++. ..+.
T Consensus 177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~-----n~L~ 251 (330)
T KOG1583|consen 177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF-----NVLT 251 (330)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH-----HHHH
Confidence 88888877766654 367888999998877665433210 0 0000 0000111233444433 3445
Q ss_pred HHHHHHHh----hccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 238 YVGLTWCV----KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 238 ~~~~~~~~----~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
++...+++ .+.++.+++++..+.-.++.+++++.|+.+++++.|+|.+++..|..++...
T Consensus 252 Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 252 QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 55555554 4566778889999999999999999999999999999999999999988543
No 41
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.08 E-value=2.1e-09 Score=96.76 Aligned_cols=136 Identities=13% Similarity=0.129 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCC---Ccccccch-hHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNH---SAWSFKGK-IEIISVLYAGIV 232 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~-~~~~~l~~~g~~ 232 (335)
.|.+++++++++|+...+..|.. .+ -++.+..+++++++.+.+.++.....+.. ...+.... ..+..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 48899999999999999999984 44 46799999999999888777654432210 01111111 223445555654
Q ss_pred HHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 233 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
.++++.+++++++++++..++.+.++.|+++++++++++||+++..+++|.++.++|+.++.
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999988764
No 42
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.03 E-value=1.2e-09 Score=91.31 Aligned_cols=211 Identities=13% Similarity=0.098 Sum_probs=154.0
Q ss_pred HHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCccccccc
Q 019825 56 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYS 135 (335)
Q Consensus 56 ~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~ 135 (335)
.+.++.|..+++..+++.++.+..+..-|+.+++++.+|+|+...+ +.+.++++.|+..+.+.
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~----------- 126 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYA----------- 126 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEec-----------
Confidence 4678899999999999999999999999999999999999999996 99999999999888742
Q ss_pred chhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHH-----HHHHHHHHhcc
Q 019825 136 QAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAI-----QAAILCLATNR 210 (335)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~ 210 (335)
++.....+.|+.+++.++++.|+|.+.-|+...+..- -....+....+.. ..-+..+.. .
T Consensus 127 -------------DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF~NL~~~~~~~lIL~~-T 191 (290)
T KOG4314|consen 127 -------------DNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGFFNLCFISFPALILAF-T 191 (290)
T ss_pred -------------cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHhhhHHHHHH-h
Confidence 2224456799999999999999999999998765321 1112222222211 111222222 2
Q ss_pred CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHh
Q 019825 211 NHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIG 290 (335)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g 290 (335)
....|+......|.++...+.+..+ -.++.+.++..+.|...+.-......--...+.++-+-..+...+.|-+++..|
T Consensus 192 ~VE~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~ 270 (290)
T KOG4314|consen 192 GVEHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG 270 (290)
T ss_pred chHHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2223332233447777666654433 235567888889999888888888888889998776667888999999999999
Q ss_pred hhheeeccc
Q 019825 291 LYILLWGKN 299 (335)
Q Consensus 291 ~~l~~~~~~ 299 (335)
..++.....
T Consensus 271 FiLiiiP~d 279 (290)
T KOG4314|consen 271 FILIIIPED 279 (290)
T ss_pred HHheecccc
Confidence 998876443
No 43
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.98 E-value=1.3e-09 Score=85.63 Aligned_cols=77 Identities=16% Similarity=0.379 Sum_probs=69.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
+++++.+++..|+++...++.++++|+++.+ +.++++.++.|+++.+++++++|||+++++ +.++.++++|+.
T Consensus 30 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~------~~a~~l~~~Gv~ 102 (113)
T PF13536_consen 30 RRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRR------WLAILLILIGVI 102 (113)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHH
Confidence 3456677778888886699999999999999 588899999999999999999999999998 999999999999
Q ss_pred HHHh
Q 019825 120 LLTL 123 (335)
Q Consensus 120 li~~ 123 (335)
++..
T Consensus 103 li~~ 106 (113)
T PF13536_consen 103 LIAW 106 (113)
T ss_pred HHhh
Confidence 9985
No 44
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.97 E-value=1.4e-08 Score=95.59 Aligned_cols=139 Identities=13% Similarity=0.158 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSG 235 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 235 (335)
..-+..+++.-++|+.+.++.|...+...++....++++.+++++++++++..++.. .++..+...+..+...|+++ .
T Consensus 12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~~~~~~~~~~~l~l~g~~g-~ 89 (358)
T PLN00411 12 AVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SLPPLSVSILSKIGLLGFLG-S 89 (358)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-ccCcchHHHHHHHHHHHHHH-H
Confidence 356677888889999999999999988778899999999999999999887654321 11111234567777778766 5
Q ss_pred HHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHH------hcCccchhHHHHHHHHHHhhhheee
Q 019825 236 LCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL------LHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~------~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+.+.+++.++++++++.++++.++.|++++++++++ ++|+++..+++|.++.++|+.++..
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 677789999999999999999999999999999998 6999999999999999999988754
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.86 E-value=3.5e-08 Score=88.83 Aligned_cols=120 Identities=17% Similarity=0.098 Sum_probs=99.7
Q ss_pred HHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019825 169 WASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKK 248 (335)
Q Consensus 169 ~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 248 (335)
|+...+..|...++..++....+++...+.+.+.+..... .+...+...+..+.++..+.+.++++++++.
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~ 71 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRL 71 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc---------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5666777888776556778889999998888877765432 1334556666777778889999999999999
Q ss_pred CceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 249 GPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 249 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
++..++++..++|+++.+++.+++||+++..+++|.++.+.|+.++...
T Consensus 72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD 120 (260)
T ss_pred ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence 9999999999999999999999999999999999999999999887643
No 46
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.85 E-value=9.8e-08 Score=76.46 Aligned_cols=122 Identities=14% Similarity=0.137 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 236 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 236 (335)
.|+++.+.+.++-+...++.|+-.++.++ ...... . +.. .... . . ....++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~-~~~~---~--------~---p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAA-LLAF---G--------L---ALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHH-HHHH---h--------c---cHHHHHHHHHHHHH
Confidence 47788899999999999999987766432 221111 0 000 0000 0 1 12356778888999
Q ss_pred HHHHHHHHhhccCceehhhhhhHHHHHHHHHHHH--HhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 237 CYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIP--LLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~--~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
++.+|.+++++.+.+.+..+....+++..+.++. ++||++|+.+++|.+++++|++++.+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888888875 79999999999999999999999875444
No 47
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.85 E-value=3e-08 Score=87.38 Aligned_cols=206 Identities=14% Similarity=0.016 Sum_probs=127.8
Q ss_pred hHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhcCCCccc-------ccccchhhhhhhc
Q 019825 72 TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFD-------HSYSQAETAINVM 144 (335)
Q Consensus 72 ~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~-------~~~~~~~~~~~~~ 144 (335)
.......+..++++++..+.+.++|.+..+ +++..+...|+......+.+.... ...+..++
T Consensus 5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~----- 73 (222)
T TIGR00803 5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS----- 73 (222)
T ss_pred cchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC-----
Confidence 344567788999999999999999999765 999999999987644321110000 00000000
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhH-HHHHHHHHHHHHHHHHHHhccCC-Cccc---ccc
Q 019825 145 HMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSS-TAILSLFGAIQAAILCLATNRNH-SAWS---FKG 219 (335)
Q Consensus 145 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~-~~~~---~~~ 219 (335)
.+......+...|..+.+.+.++-+...+..++..|+.+..... .....+++.+...........+. ..+. ..+
T Consensus 74 -~~~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (222)
T TIGR00803 74 -SAKTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYP 152 (222)
T ss_pred -CccccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCc
Confidence 00011123455777778888888888888888876654321111 11122222222222111111110 1111 011
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhe
Q 019825 220 KIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 294 (335)
Q Consensus 220 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~ 294 (335)
...| .+ ++..+....+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|++++
T Consensus 153 ~~~~-~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 153 TAVW-IV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred hHHH-HH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 1111 11 2244667778889999999999999999999999999999999999999999999999998763
No 48
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.82 E-value=2.5e-08 Score=78.38 Aligned_cols=107 Identities=21% Similarity=0.373 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHH
Q 019825 192 ILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPL 271 (335)
Q Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~ 271 (335)
++..++.+.+..+.....+....++......+...+..|++....++.++.+++++.++ .+.++..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 55666677666666553332111111122335556666776666889999999999995 88899999999999999999
Q ss_pred hcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 272 LHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 272 ~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
++|+++..+++|.+++++|+.++.+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999876543
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.81 E-value=8.4e-08 Score=88.10 Aligned_cols=230 Identities=17% Similarity=0.202 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhc
Q 019825 46 CLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK 125 (335)
Q Consensus 46 ~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~ 125 (335)
..++.|.+...++..+.+.|+.+.|.+..+.+..+.-++..+++..++|||+++++ +.|+.+++.|..+++..
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~- 123 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF- 123 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe-
Confidence 44555665556888999999999999999999999999999999999999999999 99999999999887753
Q ss_pred CCCccc-c-cccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHH-
Q 019825 126 GMPLFD-H-SYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAA- 202 (335)
Q Consensus 126 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~- 202 (335)
++.... + .++..+. -.+...+.+...... +...+.....+|..++ +..........+++...+
T Consensus 124 ~~~~~~~~t~~~l~~~-----------~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~ 189 (300)
T PF05653_consen 124 APKEEPIHTLDELIAL-----------LSQPGFLVYFILVLV-LILILIFFIKPRYGRR--NILVYISICSLIGSFTVLS 189 (300)
T ss_pred CCCCCCcCCHHHHHHH-----------hcCcceehhHHHHHH-HHHHHHHhhcchhccc--ceEEEEEEeccccchhhhH
Confidence 322110 0 0000000 000001112222222 2222222222232222 111001111111111100
Q ss_pred --HHHHH-hc--cCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhH-HHHHHHHHHHHHhcCcc
Q 019825 203 --ILCLA-TN--RNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIPLLHERL 276 (335)
Q Consensus 203 --~~~~~-~~--~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~ 276 (335)
.+... .. ....++. ....|..++.. +.+...-....++++++.+++.+..+.+. -...+.+-|.++++|..
T Consensus 190 ~K~i~~~i~~~~~g~~~f~--~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~ 266 (300)
T PF05653_consen 190 AKAISILIKLTFSGDNQFT--YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFS 266 (300)
T ss_pred HHHHHHHHHHHhcCchhhh--hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccc
Confidence 01100 00 1111221 22333333322 22444555677899999999877666554 45566677777888753
Q ss_pred --ch----hHHHHHHHHHHhhhheeeccc
Q 019825 277 --HI----GSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 277 --~~----~~~~G~~lii~g~~l~~~~~~ 299 (335)
+. ....|..++++|+++....+.
T Consensus 267 ~~~~~~~~~~~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 267 RMTAWQIIGFLCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred cccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence 44 345788889999998864433
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.81 E-value=1.4e-07 Score=86.71 Aligned_cols=133 Identities=14% Similarity=0.037 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
=.+..++..+.|+...+..|...++ .+|....++++.++.++++++....... . .+..++......|++.....
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~--~~~~~~~~~~~~g~~~~~~~ 82 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGHP---L--PTLRQWLNAALIGLLLLAVG 82 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCCC---C--CcHHHHHHHHHHHHHHHHHH
Confidence 3566788889999999999987775 5779999999999999888876553321 1 13345666667777666677
Q ss_pred HHHHHHHh-hccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 238 YVGLTWCV-KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 238 ~~~~~~~~-~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
+.+++.+. ++.++..++++.+++|+++.+++++ +||+++..+++|.++.++|+.+....
T Consensus 83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~ 142 (292)
T PRK11272 83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG 142 (292)
T ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence 88888898 9999999999999999999999975 79999999999999999999887543
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.72 E-value=4.5e-07 Score=83.43 Aligned_cols=131 Identities=11% Similarity=0.093 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 236 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 236 (335)
.+++++++++++|+......|...++. +|....++++..+.++++++.. . +..+. ..+..++. +.+....
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~-~P~~~~~~R~~~a~l~l~~~~~--~---~~~~~---~~~~~~~~-~~l~~~~ 73 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESL-GPVGGAAMIYSVSGLLLLLTVG--F---PRLRQ---FPKRYLLA-GGLLFVS 73 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHcc--c---ccccc---ccHHHHHH-HhHHHHH
Confidence 567889999999999999999988775 6799999999999888776531 1 11111 11222222 2223344
Q ss_pred HHHHHHHHh----hccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 237 CYVGLTWCV----KKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 237 ~~~~~~~~~----~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
.+.+++.++ +..++..++++.++.|+++.++++++++|+++..+++|.++.++|++++...
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 445555555 4567888899999999999999999999999999999999999999988753
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.70 E-value=4.4e-07 Score=83.64 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHH
Q 019825 159 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCY 238 (335)
Q Consensus 159 ~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 238 (335)
.+++++++++|+...+..|...++ .+|....++++.++.+.++++.. .. .. + +..+...|+......+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~--~~---~---~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP--KV---P---LNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC--CC---c---hHHHHHHHHHHHHHHH
Confidence 366888999999999999988777 47799999999987766554431 11 11 1 1223333443444455
Q ss_pred HHHHHHhhc-cCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 239 VGLTWCVKK-KGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 239 ~~~~~~~~~-~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
.+++.++++ .++..++.+..++|+++.++++++++|+++..+++|.++.++|+.++.+.
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~ 133 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED 133 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence 566778887 57789999999999999999999999999999999999999999988753
No 53
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.64 E-value=5.7e-07 Score=82.97 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=97.3
Q ss_pred hHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 019825 171 SWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGP 250 (335)
Q Consensus 171 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 250 (335)
.+++++|...++++.|...++.++..+.+.+.+......... .+ .+..++..++..|++ .++.+.+.+++++++++
T Consensus 16 ~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~ 91 (302)
T TIGR00817 16 YFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKR--LK-ISSALLKLLLPVAIV-HTIGHVTSNVSLSKVAV 91 (302)
T ss_pred HHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCC--CC-CCHHHHHHHHHHHHH-HHHHHHHHHHHHHhccH
Confidence 345677888887788899999999988776655421111111 11 245577788888886 47788999999999999
Q ss_pred eehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 251 VFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 251 ~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
+..+++..+.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999998754
No 54
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.56 E-value=3.3e-06 Score=79.59 Aligned_cols=128 Identities=14% Similarity=0.122 Sum_probs=98.6
Q ss_pred HHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019825 167 LLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVK 246 (335)
Q Consensus 167 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 246 (335)
.+...+++..|...+..+-|.+++.++++++.+.+...........+... ....++..++..|++... .+...+.+++
T Consensus 59 ~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~~-~~~~~~~sl~ 136 (350)
T PTZ00343 59 ALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHLF-VHFGAVISMG 136 (350)
T ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 33455677889888887648999999999998876555332111111111 123466777778876544 4666779999
Q ss_pred ccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 247 KKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 247 ~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+.+++.++++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 137 ~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 137 LGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred hccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 99999999999999999999999999999999999999999999998864
No 55
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.53 E-value=4.3e-05 Score=71.08 Aligned_cols=241 Identities=14% Similarity=0.147 Sum_probs=145.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh-hhHHHHHHHHHHhccccc---cccccCCcceeehHhHH
Q 019825 39 LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN-MVPVITFVIALPFGLETV---DIKGISGKAKVVGTLVC 114 (335)
Q Consensus 39 ~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pl~~~lla~~~~~e~~---~~~~~~~~~k~~g~~l~ 114 (335)
.+.+.+...++.|++= ...+.+++.++++.+.+.+..+.. ++-++..++..++++|.. +-.+ |..-+.|+++.
T Consensus 68 ~~~~~~~~~~l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~li 144 (345)
T PRK13499 68 FSGSTLLPVFLFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVA 144 (345)
T ss_pred cCHHHHHHHHHHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHH
Confidence 4567888888888887 599999999999999999986654 999999999999999765 2211 22227788888
Q ss_pred HHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHH-------HHHHHhhccCCCch
Q 019825 115 IGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWF-------PIQSYIGKRYPCKY 187 (335)
Q Consensus 115 ~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~-------~~~k~~~~~~~~~~ 187 (335)
++|+.+... .+..-+. +..+. +.++.+...|.++++++.+.++.|. ...+...+...++.
T Consensus 145 liGi~l~s~-Ag~~k~~---~~~~~---------~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~ 211 (345)
T PRK13499 145 LIGVAIVGR-AGQLKER---KMGIK---------KAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPL 211 (345)
T ss_pred HHHHHHHHH-hhhhccc---ccccc---------cccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCch
Confidence 888888774 1111000 00000 0224566799999999999999999 44433211111223
Q ss_pred hHHHHHHH---HHHHHHH-HHHHH---hccCCC--cccccchhHHHHH----HHHHHHHHHHHHHHHHHHhhccCceehh
Q 019825 188 SSTAILSL---FGAIQAA-ILCLA---TNRNHS--AWSFKGKIEIISV----LYAGIVGSGLCYVGLTWCVKKKGPVFTA 254 (335)
Q Consensus 188 ~~~~~~~~---~~~i~~~-~~~~~---~~~~~~--~~~~~~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~s 254 (335)
.....+.. ++..+.- .+... .+++.. .....+...+..- +..|++- .+++.+|..+-.+.+.....
T Consensus 212 ~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~ 290 (345)
T PRK13499 212 YAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDF 290 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccch
Confidence 22322222 3333222 22222 111111 1111111111222 2333322 45566777777776554333
Q ss_pred h---hh-hHHHHHHHHHHHHHhcCccc------hhHHHHHHHHHHhhhheeec
Q 019825 255 A---FS-PLVQIMAAMFDIPLLHERLH------IGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 255 ~---~~-~~~pv~~~l~~~~~~ge~~~------~~~~~G~~lii~g~~l~~~~ 297 (335)
. +. .+..+++.+.++ ++||.=+ ..-++|.++++.|..++...
T Consensus 291 ~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 291 VSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 3 33 777799999998 5999755 56689999999998877543
No 56
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.52 E-value=1.2e-06 Score=68.36 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 230 GIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 230 g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
++++.+++++++..++++.+.+.+..+..+.++++.+++++++||+++..+++|.+++++|++++.
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345667899999999999999999999999999999999999999999999999999999998764
No 57
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.50 E-value=1.3e-06 Score=77.92 Aligned_cols=140 Identities=13% Similarity=0.096 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCccc-ccchhHHHHHHHHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWS-FKGKIEIISVLYAGIVGS 234 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~ 234 (335)
..|+++.+.+-+.|+..-.+.|.+... ++..+..++.+++.+..........+...-+. ..++..+......+++.
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li- 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEPL--PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI- 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-
Confidence 379999999999999999888876543 56889999999999888777665533221111 12344566666666643
Q ss_pred HHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 235 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
...+..|.|+..+....++|+-.+++|++.+++|.++++|+++..|++..++..+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999999999999999999999998876543
No 58
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.44 E-value=1.3e-05 Score=72.74 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSG 235 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 235 (335)
..+....+..++.|+......|...++..+.....+.+...+.+...+...... ....+ ....+......+.+...
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEP--RGLRP--ALRPWLLLLLLALLGLA 81 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhc--ccccc--cccchHHHHHHHHHHHH
Confidence 467888888889999999999888765234344445566666665332322111 11111 11124455556666778
Q ss_pred HHHHHHHHHhhccCceehhhhhhHHHHHHHHHHH-HHhcCccchhHHHHHHHHHHhhhheeeccccc
Q 019825 236 LCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDI-PLLHERLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~-~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
..+.+++.++++.++..+..+.++.|++..++++ ++++|+++..++.|..+.+.|++++.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~ 148 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG 148 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence 9999999999999999999999999999999997 66699999999999999999999998765543
No 59
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.41 E-value=3e-06 Score=77.91 Aligned_cols=111 Identities=16% Similarity=0.059 Sum_probs=87.5
Q ss_pred HHhhhhcCCCchHHHHHHHHHHH----h-hccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhh
Q 019825 7 MMNNFLSAVPHCQCFIFRHLSYK----L-ACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMV 81 (335)
Q Consensus 7 ~~k~~~~~~~p~~~~~~R~~~a~----~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~ 81 (335)
+.|+..++.++..........+. + .........+...+...+..|++...+.+.++++++++.+++.++++.+++
T Consensus 166 ~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~ 245 (293)
T PRK10532 166 SGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSME 245 (293)
T ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhH
Confidence 35666667788776555443333 1 111112234556666677888988889999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 82 PVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 82 Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
|++..++++++++|+++..+ ++|..+.++|++....
T Consensus 246 Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 246 PALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHh
Confidence 99999999999999999998 9999999999998875
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.38 E-value=2e-06 Score=67.15 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 48 FFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 48 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
...++++....+.++.++++..|.+.+..+.++.++++.+++++++|||+++++ ++|+.+.++|+.++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 334446667899999999999999999999999999999999999999999997 999999999998875
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.21 E-value=3.8e-05 Score=70.54 Aligned_cols=131 Identities=20% Similarity=0.214 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
|.+++++++++|+...+..|+.. ..+. .... ...++.++.......... +. . +....+..-...|+ .-+++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~-~~~~--~~~~g~l~~~~~~~~~~~-~~-~--~~~~~~~~g~l~G~-~w~ig 72 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPY-SQTL--GTTFGALILSIAIAIFVL-PE-F--WALSIFLVGLLSGA-FWALG 72 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHH-HHHH--HHHHHHHHHHHHHHHHhC-Cc-c--cccHHHHHHHHHHH-HHHhh
Confidence 56889999999999999999875 3222 2222 355555555544443322 11 1 12233333333444 34678
Q ss_pred HHHHHHHhhccCceehhhhhh-HHHHHHHHHHHHHhcCccchhH----HHHHHHHHHhhhheeec
Q 019825 238 YVGLTWCVKKKGPVFTAAFSP-LVQIMAAMFDIPLLHERLHIGS----LLGSITVIIGLYILLWG 297 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ge~~~~~~----~~G~~lii~g~~l~~~~ 297 (335)
+.++..++++.+.+.+-.+.. ++++++.+++.+++||+.+..+ ++|.++++.|+++....
T Consensus 73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 899999999999999988888 9999999999999999999999 99999999999887544
No 62
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.10 E-value=1.1e-05 Score=72.90 Aligned_cols=226 Identities=12% Similarity=0.145 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHhhc
Q 019825 46 CLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTLYK 125 (335)
Q Consensus 46 ~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~ 125 (335)
+++..|.+...++...-|.|+.+.|++..+.+..+.-+..++++..+++||++... .+|..++++|-.+++. .
T Consensus 65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~-h 137 (335)
T KOG2922|consen 65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVI-H 137 (335)
T ss_pred HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEE-e
Confidence 45567777777899999999999999999999999999999999999999999998 9999999999888885 3
Q ss_pred CCCccc--ccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHH--
Q 019825 126 GMPLFD--HSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQA-- 201 (335)
Q Consensus 126 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~-- 201 (335)
++.... +-+|..+. ..+...+.+...+. +...+-....|... ...+ ...|..+.+.+-.
T Consensus 138 aP~e~~i~t~~el~~~-----------~~~~~Fliy~~~ii--l~~~il~~~~~p~~-g~tn---ilvyi~i~s~iGS~t 200 (335)
T KOG2922|consen 138 APKEQEIESVEEVWEL-----------ATEPGFLVYVIIII--LIVLILIFFYAPRY-GQTN---ILVYIGICSLIGSLT 200 (335)
T ss_pred cCcccccccHHHHHHH-----------hcCccHHHHHHHHH--HHHHHHheeecccc-cccc---eeehhhHhhhhccee
Confidence 332111 11111110 00111111222222 11222222222211 0112 2233333333311
Q ss_pred ------HHHH--HHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhh-HHHHHHHHHHHHHh
Q 019825 202 ------AILC--LATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSP-LVQIMAAMFDIPLL 272 (335)
Q Consensus 202 ------~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ 272 (335)
+..+ +...+ ..+.. .+..|..++.... +...-..-.+++++..++..+..+.+ .-..++++-+.++|
T Consensus 201 V~svKalg~aiklt~~g-~~ql~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~F 276 (335)
T KOG2922|consen 201 VMSVKALGIAIKLTFSG-NNQLF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILF 276 (335)
T ss_pred eeeHHHHHHHHHHHhcC-Ccccc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHH
Confidence 1111 11111 11221 2244544444443 33445556689999998877666554 45667777788888
Q ss_pred cCccc------hhHHHHHHHHHHhhhheeeccc
Q 019825 273 HERLH------IGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 273 ge~~~------~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+|--. ...+.|...++.|+++....|.
T Consensus 277 kew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd 309 (335)
T KOG2922|consen 277 KEWSGQDALDIAGELCGFVTIFLGIFLLHRTKD 309 (335)
T ss_pred HHhcCCcHHHHHHHHHhHHHhhheeeEeeeecc
Confidence 88542 2466888899999998854433
No 63
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.01 E-value=0.0002 Score=66.63 Aligned_cols=142 Identities=9% Similarity=-0.011 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGKR-YPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGS 234 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 234 (335)
..+.++.-.-+++-+..++.+..+.++ ..-|..-+++....-.++..+..+...+. ..+.......|+.-+..+++ =
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~-~~~~~~~~~~~w~y~lla~~-D 89 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGF-KKWLKVLKRPWWKYFLLALL-D 89 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhcccc-ccchhhcchhHHHHHHHHHH-H
Confidence 344444444455555555555554443 22345556666555555555554443322 12221122334444445653 3
Q ss_pred HHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 235 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+.+.++...++++++.+.+.++.....++++++++++++++.++.+++|+++.++|+.++.....
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 68899999999999999999999999999999999999999999999999999999999876543
No 64
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.98 E-value=1.3e-06 Score=76.71 Aligned_cols=137 Identities=11% Similarity=0.108 Sum_probs=97.6
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHH
Q 019825 154 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVG 233 (335)
Q Consensus 154 ~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 233 (335)
...+|..+..++ ..+....++.++.... +|....-.++++-.++..|..+...+.. +- +...-.+++.=|+++
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~g--p~g~R~~LiLRg~mG 107 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IG--PEGKRKWLILRGFMG 107 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ec--CCCcEEEEEeehhhh
Confidence 345788898888 7777888888887665 4565666665555555555444322211 11 111112223334433
Q ss_pred HHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 234 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
..+..+.+|++++.+-+.+.++...+|+++.+++|.+++|+.|.+..+|..+.+.|++++.+..
T Consensus 108 -~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 108 -FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred -hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 3456677799999999999999999999999999999999999999999999999999997543
No 65
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.96 E-value=4.4e-05 Score=60.15 Aligned_cols=68 Identities=24% Similarity=0.383 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhhccCceehhhh-hhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 231 IVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
++..+++++++..++|+.+...+=.+ ..+..+.+.+++++++||++|+.+++|++++++|++.+....
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 33457899999999999999887666 468889999999999999999999999999999999885443
No 66
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.95 E-value=2.6e-06 Score=73.96 Aligned_cols=230 Identities=18% Similarity=0.150 Sum_probs=152.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh-hhHHHHHHHHHHhccccccccccCCcceeehHhH
Q 019825 35 SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN-MVPVITFVIALPFGLETVDIKGISGKAKVVGTLV 113 (335)
Q Consensus 35 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l 113 (335)
..|..+.+.+.--++.|++= +..+...+.|+++.+.+.+..+.. ++-+-+.+.+.+.++|..+..+ +++
T Consensus 50 ~~p~~T~~~~iv~~isG~~W-s~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~---------~Il 119 (288)
T COG4975 50 VSPELTLTIFIVGFISGAFW-SFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ---------IIL 119 (288)
T ss_pred ecCccchhhHHHHHHhhhHh-hhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh---------HHH
Confidence 45666778888888888876 599999999999999999998866 8999999999999999999877 444
Q ss_pred HHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHH
Q 019825 114 CIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAIL 193 (335)
Q Consensus 114 ~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~ 193 (335)
++..+.+++. |....+..+...++ +++.++...|....+.+.+.|-.|.+..+...- +..+...-+
T Consensus 120 G~iAlilivi--G~~lTs~~~~~nk~---------~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiLPq 185 (288)
T COG4975 120 GFIALILIVI--GIYLTSKQDRNNKE---------EENPSNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAILPQ 185 (288)
T ss_pred HHHHHHHHHH--hheEeeeecccccc---------ccChHhhhhheeeeeeeccceeeeEeeeccccc---cchhhhhHH
Confidence 4444444442 11111100000000 233455668999999999999999998776532 334433333
Q ss_pred HHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhc
Q 019825 194 SLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLH 273 (335)
Q Consensus 194 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~g 273 (335)
..-..+..+.+... ..+ .. .....+.-+..|++. +.+...+..+-++.+..+.=.+.-+..+++.+-++++++
T Consensus 186 AiGMv~~ali~~~~-~~~-~~----~~K~t~~nii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ 258 (288)
T COG4975 186 AIGMVIGALILGFF-KME-KR----FNKYTWLNIIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLG 258 (288)
T ss_pred HHHHHHHHHHHhhc-ccc-cc----hHHHHHHHHhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEe
Confidence 33222222222222 111 11 122333344455544 567777788888888877777778888999999999999
Q ss_pred CccchhH----HHHHHHHHHhhhhee
Q 019825 274 ERLHIGS----LLGSITVIIGLYILL 295 (335)
Q Consensus 274 e~~~~~~----~~G~~lii~g~~l~~ 295 (335)
|+=|..+ ++|.++++.|..+.-
T Consensus 259 ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 259 EKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred ccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 9887765 467788777766553
No 67
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.84 E-value=0.00056 Score=63.19 Aligned_cols=129 Identities=17% Similarity=0.069 Sum_probs=94.7
Q ss_pred HHHhHHHHHHHhhcc-CCC--chhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 019825 168 LWASWFPIQSYIGKR-YPC--KYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWC 244 (335)
Q Consensus 168 ~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 244 (335)
++..+.+.++++.++ +.. +..+++.+.....+...+......... . ....+...+..++ ...++..+-+.+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~-~~~~~~~~~~~a 84 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-S----RKIPLKKYAILSF-LFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-C----CcChHHHHHHHHH-HHHHHHHHHHHH
Confidence 344566777777664 223 677888888888877766655443111 1 1122233333344 446777888899
Q ss_pred hhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccch
Q 019825 245 VKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM 302 (335)
Q Consensus 245 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~ 302 (335)
+++++...-.++-...|+..++++++++|++.+..++.+.+++.+|+.+....+.++.
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 9999999999999999999999999999999999999999999999999987654443
No 68
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.82 E-value=7.1e-05 Score=59.98 Aligned_cols=70 Identities=17% Similarity=0.328 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHH--hccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 47 LFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALP--FGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 47 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~--~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
++..|+....+++.++.++++..+++.+..+.+..++++.+.++. ++||+++..+ ++|+.+.++|+.++.
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence 577888888899999999999999999999999999888888885 7999999997 999999999999986
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.82 E-value=0.00036 Score=54.24 Aligned_cols=66 Identities=11% Similarity=0.160 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHhhccCceehhhh-hhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 232 VGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
+..+++++++..++|+.+...+=.+ ..+..+.+.++++++|+|++++.+++|+++++.|++.....
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3447889999999999998777655 56788889999999999999999999999999999998543
No 70
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.77 E-value=0.00074 Score=54.83 Aligned_cols=132 Identities=17% Similarity=0.137 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
..++++++...-++...++.++.++..++...++..+..+.+.+..+.++..+. ..+......|+..+ .|+ .++..
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence 357788888889999999999888755689999999999999988887776553 22211222233332 444 44566
Q ss_pred HHHHHHHhhccCceehhhhhhH-HHHHHHHHHHH----HhcCccchhHHHHHHHHHHhhhh
Q 019825 238 YVGLTWCVKKKGPVFTAAFSPL-VQIMAAMFDIP----LLHERLHIGSLLGSITVIIGLYI 293 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~~-~pv~~~l~~~~----~~ge~~~~~~~~G~~lii~g~~l 293 (335)
..+..+.+++++++....+... |-+.++++|.+ .-++++++.+++|.++++.|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7777889999999777666655 45566777875 24678999999999999999864
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.57 E-value=0.0016 Score=50.37 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhhccCceeh-hhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 233 GSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
..++++++...++|+++...+ ++...+..+.+.+.+++++||++++.+++|+++++.|++...
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 447899999999999988655 455567788889999999999999999999999999998763
No 72
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.53 E-value=0.00078 Score=62.04 Aligned_cols=122 Identities=17% Similarity=0.129 Sum_probs=87.4
Q ss_pred CchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHH
Q 019825 153 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIV 232 (335)
Q Consensus 153 ~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 232 (335)
.++..|.++++.++++.+....++|+...+.+. ...-.-. .....++ ++..|..+ +
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~----------------~~~~~l~--~~~W~~G~-----~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS----------------GGRSYLR--RPLWWIGL-----L 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc----------------hhhHHHh--hHHHHHHH-----H
Confidence 455689999999999999999999997665221 0000000 0000111 11122222 2
Q ss_pred HHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 233 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
..+++..+...++...+++.++.+..+..++..+++.+++||+++...+.|.++++.|..++....
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 234556666788889999999999999999999999999999999999999999999998776443
No 73
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.52 E-value=0.002 Score=52.46 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 236 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 236 (335)
+..+.++++..+-.+...++.++.+...+|....+..+..+.+.+..+.+..++ ...+.......|+.. .-|++ .++
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~-~GG~l-Ga~ 81 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAW-IGGLL-GAI 81 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHH-Hccch-hhh
Confidence 677888999999999999999988776678889999999999988888777433 222222222223332 22332 233
Q ss_pred HHHHHHHHhhccCce-ehhhhhhHHHHHHHHHHHHHhc----CccchhHHHHHHHHHHhhhheeec
Q 019825 237 CYVGLTWCVKKKGPV-FTAAFSPLVQIMAAMFDIPLLH----ERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~-~~s~~~~~~pv~~~l~~~~~~g----e~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
....-.....+++++ .......-|-+.++++|.+=+. .+++..+++|++++++|+++..+.
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 344445666777664 4455556667777888876443 578999999999999996665543
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.52 E-value=0.002 Score=49.63 Aligned_cols=64 Identities=22% Similarity=0.207 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHhhccCceeh-hhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 233 GSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+.++++++...++|+.+...+ ++..-+..+.+.+.+++++||++++.+++|+.+++.|++....
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 447899999999999988655 4555688889999999999999999999999999999998753
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.47 E-value=0.0014 Score=50.14 Aligned_cols=64 Identities=23% Similarity=0.293 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhhccCceeh-hhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 234 SGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
...+|.+...++|+.+...+ ++..-.-.+.+.+.++++|||+++..+++|..++++|++.....
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 36789999999999887554 56677788888999999999999999999999999999987643
No 76
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.26 E-value=0.0032 Score=47.42 Aligned_cols=55 Identities=22% Similarity=0.274 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhccCceehhh-hhhHHHHHHHHHHHHHhcCccchhHHHHHHHH
Q 019825 233 GSGLCYVGLTWCVKKKGPVFTAA-FSPLVQIMAAMFDIPLLHERLHIGSLLGSITV 287 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~-~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~li 287 (335)
..+++++++.+++|+.+...+-. ...+..+...+.+++++||++|+.+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 45788999999999999988854 45689999999999999999999999999875
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.20 E-value=0.0012 Score=50.52 Aligned_cols=65 Identities=20% Similarity=0.282 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHhhccchhHHH-HHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 52 IVGTSLTQYFFLLGIQYTSATFAC-AFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 52 ~~~~~~~~~~~~~al~~~~~~~a~-~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
+.+...++.+.-.++++.|.+.+- +....-.+.+.+.+++++||+++..+ ++++.+.++|+..+-
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 334468899999999999999885 55669999999999999999999997 999999999998874
No 78
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.18 E-value=0.0052 Score=55.23 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhh-hHHHHHHHHHHHHHhcCccchhHH----HHHHHHHHhhhhee
Q 019825 221 IEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGLYILL 295 (335)
Q Consensus 221 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~pv~~~l~~~~~~ge~~~~~~~----~G~~lii~g~~l~~ 295 (335)
..+..-...|++. .+++..+++++++.+.+++..+. .++.+.+.++++++|||..+..++ ++.++++.|+++..
T Consensus 43 ~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 43 TSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 5566666677755 68999999999999999998887 567777889999999998876654 47788889999888
Q ss_pred eccccchh
Q 019825 296 WGKNKEMQ 303 (335)
Q Consensus 296 ~~~~~~~~ 303 (335)
+.++++.+
T Consensus 122 ~~~~~~~~ 129 (269)
T PF06800_consen 122 YQDKKSDK 129 (269)
T ss_pred cccccccc
Confidence 76665543
No 79
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.16 E-value=0.004 Score=58.09 Aligned_cols=139 Identities=13% Similarity=0.111 Sum_probs=90.7
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHH--HHHH--HHHhccC-CCcccccchhHHHHHHH
Q 019825 154 RWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQ--AAIL--CLATNRN-HSAWSFKGKIEIISVLY 228 (335)
Q Consensus 154 ~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~--~~~~--~~~~~~~-~~~~~~~~~~~~~~l~~ 228 (335)
+...|+++.++++++|+.+.+-.|+ .++. + ++.. |- ..+.+. +.|+ ..+..++ .......+...+..-..
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~-wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-S-WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC-c-hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 3458999999999999999999988 4443 2 3222 32 111111 1111 1111111 11122123445555566
Q ss_pred HHHHHHHHHHHHHHHHhhccCceehhhh-hhHHHHHHHHHHHHHhcCcc---c----hhHHHHHHHHHHhhhheeecc
Q 019825 229 AGIVGSGLCYVGLTWCVKKKGPVFTAAF-SPLVQIMAAMFDIPLLHERL---H----IGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 229 ~g~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~---~----~~~~~G~~lii~g~~l~~~~~ 298 (335)
.|++- .+++..+..++|+.+.+....+ .-++-+.+.+++.+++||-. + ..-++|.+++++|+.+..+..
T Consensus 79 ~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 79 FGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 66654 6899999999999998776655 45778889999999999754 2 346789999999999987743
No 80
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.15 E-value=0.0021 Score=52.67 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=79.9
Q ss_pred cCCCchHHHHHHHHHHH-------hh-ccCCC-------C--C--CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 019825 13 SAVPHCQCFIFRHLSYK-------LA-CRNSR-------P--K--LTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATF 73 (335)
Q Consensus 13 ~~~~p~~~~~~R~~~a~-------~~-~~~~~-------~--~--~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 73 (335)
+..+++++..+-...+. +. ...+. . . .+.+.+...+..|++.. ..+...+..++++++..
T Consensus 31 ~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt 109 (153)
T PF03151_consen 31 KKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAF-LYNLSSFLLIKLTSPLT 109 (153)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHH-HHHHHHHHHhhhcChhH
Confidence 36788888888777777 11 11110 0 0 02355666677777774 89999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 74 ACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 74 a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
.++....-.+.+.++++++++|+++..+ +.|+.+++.|+.+
T Consensus 110 ~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 110 YSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 9999999999999999999999999998 9999999999875
No 81
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.13 E-value=0.0018 Score=51.09 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHh-hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 50 SAIVGTSLTQYFFLLGIQYTSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 50 ~g~~~~~~~~~~~~~al~~~~~~~a~~i~-~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
..+.....++.++..++++.|.+.+-.+. .+.-+.+.++++++++|+++..+ ++|+.+.++|+.++-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 34444568899999999999999997664 69999999999999999999997 9999999999988753
No 82
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.08 E-value=0.0025 Score=49.51 Aligned_cols=67 Identities=15% Similarity=0.320 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 51 AIVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 51 g~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
.+.....++.++..+++..|.+.+-.+ ....-+.+.+++++++||+++..+ +.|+.+.++|+.++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 344456888999999999999999766 558999999999999999999997 9999999999999853
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.07 E-value=0.0024 Score=49.45 Aligned_cols=61 Identities=10% Similarity=0.090 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhccchhHHH-HHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHH
Q 019825 55 TSLTQYFFLLGIQYTSATFAC-AFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 121 (335)
Q Consensus 55 ~~~~~~~~~~al~~~~~~~a~-~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li 121 (335)
...++.+...+++..|.+.+- +......+.+.+++++++||++++.+ +.|+.+.+.|+..+
T Consensus 45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 358889999999999999985 45558999999999999999999997 99999999999875
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.01 E-value=0.0028 Score=48.75 Aligned_cols=65 Identities=8% Similarity=0.088 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhhccchhHHH-HHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 52 IVGTSLTQYFFLLGIQYTSATFAC-AFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 52 ~~~~~~~~~~~~~al~~~~~~~a~-~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
+.+...++.+...+++..|.+.+- +....-.+.+.+++++++||++++.+ ++|+.+.++|+..+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 334468889999999999999985 55559999999999999999999997 999999999998874
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.99 E-value=0.0039 Score=55.72 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccc
Q 019825 234 SGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
-.+...+.+.++++.+|+...++..+..++++++++++++++++..||.+..++.+|+.+........
T Consensus 27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 35666788899999999999999999999999999999999999999999999999999987665554
No 86
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.53 E-value=0.033 Score=43.30 Aligned_cols=109 Identities=16% Similarity=0.095 Sum_probs=73.3
Q ss_pred HHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 019825 164 VGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTW 243 (335)
Q Consensus 164 ~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 243 (335)
+.+++|+..+.+.|+-.+..++.-.. . + ...-... ++. .| .++. .+.....+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~-~~~~~~~----Ll~-----n~-----~y~i-----pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-Q-LLQEIKF----LLL-----NP-----KYII-----PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-H-HHHHHHH----HHH-----hH-----HHHH-----HHHHHHHHHHHHHH
Confidence 45788999999999987654332221 1 1 1111111 111 11 1111 12223445667778
Q ss_pred HhhccCceehhhhh-hHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhe
Q 019825 244 CVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYIL 294 (335)
Q Consensus 244 ~~~~~~~~~~s~~~-~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~ 294 (335)
.+.+.+-+.+..+. .+.-+++.+.++++.+|..+...++|++++++|+.++
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 88999999888884 8899999999988888888889999999999998764
No 87
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.48 E-value=0.0055 Score=56.49 Aligned_cols=125 Identities=15% Similarity=0.188 Sum_probs=93.6
Q ss_pred hHHHHHHHhhc--cCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019825 171 SWFPIQSYIGK--RYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKK 248 (335)
Q Consensus 171 ~~~~~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 248 (335)
..++..|+..+ +++-|.+.+......+.+.....-.+...+... .++...+..++-+|++ ..++..+-+.++++.
T Consensus 31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~--~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v 107 (316)
T KOG1441|consen 31 GVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSK--ISSKLPLRTLLPLGLV-FCISHVLGNVSLSYV 107 (316)
T ss_pred eeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCc--cccccchHHHHHHHHH-HHHHHHhcchhhhcc
Confidence 35566888888 666778888886666666655554433222222 2244567777777874 467888889999999
Q ss_pred CceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 249 GPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 249 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
+.+....+-.++|+++.++++++.+|+.+...+.-.+.++.|+.+..+.+
T Consensus 108 ~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e 157 (316)
T KOG1441|consen 108 PVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE 157 (316)
T ss_pred chhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc
Confidence 99999999999999999999999999999888777777777777766543
No 88
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.42 E-value=0.0089 Score=53.41 Aligned_cols=132 Identities=14% Similarity=0.029 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHHH
Q 019825 158 GTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGLC 237 (335)
Q Consensus 158 G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 237 (335)
|.+.+++|+++++...+=.|+.... |++....++.....+..+...+..+ .+ .+. + +.++ .|.+- +.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~-~p-~f~--p----~aml-gG~lW-~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILG-FP-PFY--P----WAML-GGALW-ATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcC-CC-cce--e----HHHh-hhhhh-hcC
Confidence 5678899999999999988876443 5555555544444444443333322 11 111 1 1111 12211 334
Q ss_pred HHHHHHHhhccCceehhhhh-hHHHHHHHHHHHH-HhcCcc-----chhHHHHHHHHHHhhhheeeccccc
Q 019825 238 YVGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIP-LLHERL-----HIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~-~~~pv~~~l~~~~-~~ge~~-----~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
..+-.-.+|.++-...-.+= ..+.+.+...+-+ +||+.+ .+..++|.+++++|..++..-|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 44445556666654443333 3355566555543 455543 5678999999999999887766555
No 89
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.34 E-value=0.0033 Score=55.02 Aligned_cols=133 Identities=17% Similarity=0.180 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSGL 236 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 236 (335)
.+.+++++-++.|+..-....+...+ |..-+.-+.+-+.++.+...++ ..+. . ..+.+..-...|.+. .+
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lGtT~GALifaiiv~~~-~~p~--~---T~~~~iv~~isG~~W-s~ 71 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKFGGK---PYQQTLGTTLGALIFAIIVFLF-VSPE--L---TLTIFIVGFISGAFW-SF 71 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeecCCC---hhHhhhhccHHHHHHHHHHhee-ecCc--c---chhhHHHHHHhhhHh-hh
Confidence 35688999999999988887766543 3444444434434433333333 2111 1 234455556666665 47
Q ss_pred HHHHHHHHhhccCceehhhhhh-HHHHHHHHHHHHHhcCccchhHH----HHHHHHHHhhhheeeccc
Q 019825 237 CYVGLTWCVKKKGPVFTAAFSP-LVQIMAAMFDIPLLHERLHIGSL----LGSITVIIGLYILLWGKN 299 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ge~~~~~~~----~G~~lii~g~~l~~~~~~ 299 (335)
++....++++..+.+++..+.. .+-+-+.+++++.|||..+..+. ++.++++.|+++-.+.++
T Consensus 72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 8899999999999999988765 56677789999999999988765 456778888888776554
No 90
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.28 Score=45.50 Aligned_cols=139 Identities=13% Similarity=0.089 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCC---CchhHHHHHHHHHHHHHHHHHHHhccC-----CCccc---ccchhHHHH
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYP---CKYSSTAILSLFGAIQAAILCLATNRN-----HSAWS---FKGKIEIIS 225 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~---~~~~~~~~~ 225 (335)
.-++.++...+.++......|+..++.. .+.+..+..-++-.+++....+..++. ....+ ...+.+..-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 5566777777888888888888765421 456667777777777777766655321 00100 011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 226 VLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 226 l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+..=++ .-++-.-+++.++.+.+|+...+...+....+.++.+++++++++..||...++...|+.+.+.
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 111111 1233345788999999999999999999999999999999999999999999999999999883
No 91
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.11 E-value=0.99 Score=41.88 Aligned_cols=240 Identities=17% Similarity=0.135 Sum_probs=136.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHhhhhHHHHHHHHHHhccccc-cccccCCcceeehHhHHHHh
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFAC-AFINMVPVITFVIALPFGLETV-DIKGISGKAKVVGTLVCIGG 117 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~-~i~~~~Pl~~~lla~~~~~e~~-~~~~~~~~~k~~g~~l~~~G 117 (335)
+...+....+.|++= ......|-.+++|++.+... +...+..++-.++-.++.++-- -..++.|+.-+.|++++++|
T Consensus 69 ~~~~l~~~~l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiG 147 (344)
T PF06379_consen 69 PASTLFWTFLFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIG 147 (344)
T ss_pred ChhHHHHHHHHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHH
Confidence 345566666666665 37778899999999998875 4455766777777656544311 01123455559999999999
Q ss_pred HHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhh-------ccCCCchh--
Q 019825 118 AMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIG-------KRYPCKYS-- 188 (335)
Q Consensus 118 v~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~-------~~~~~~~~-- 188 (335)
+.++-. .|..-+ ++.. .+.++.+...|.++++++.+..|.+++-...-. +...++..
T Consensus 148 Iai~g~-AG~~Ke---~~~~----------~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~ 213 (344)
T PF06379_consen 148 IAICGK-AGSMKE---KELG----------EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYAN 213 (344)
T ss_pred HHHHhH-HHHhhh---hhhc----------cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHh
Confidence 999874 221111 0100 022345667899999999999888887654311 10011111
Q ss_pred --HHHHHHHHHHHHHHHHHHHhcc---CCC---cccccc---hhHHHHHHHHHHHHHHHHHHHHHHHhhccCc----eeh
Q 019825 189 --STAILSLFGAIQAAILCLATNR---NHS---AWSFKG---KIEIISVLYAGIVGSGLCYVGLTWCVKKKGP----VFT 253 (335)
Q Consensus 189 --~~~~~~~~~~i~~~~~~~~~~~---~~~---~~~~~~---~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~----~~~ 253 (335)
.....+.-+.+.-+.+.++... +.. .+.... ...+..-+..|++- ...+.+|..+-.+.+. .--
T Consensus 214 l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lW-y~qfffYg~G~s~lg~~~~~~sW 292 (344)
T PF06379_consen 214 LPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLW-YSQFFFYGMGESKLGASGPFSSW 292 (344)
T ss_pred CchhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCccccHHH
Confidence 2233334455555555554322 211 111101 12222333333332 2344555566555553 344
Q ss_pred hhhhhHHHHHHHHHHHHHhcC------ccchhHHHHHHHHHHhhhheee
Q 019825 254 AAFSPLVQIMAAMFDIPLLHE------RLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 254 s~~~~~~pv~~~l~~~~~~ge------~~~~~~~~G~~lii~g~~l~~~ 296 (335)
.+.+.+..+++-+++++ ++| ++-..-++|.++++.+++++-+
T Consensus 293 ~i~ma~~vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 293 AIHMALIVLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 56777888889999964 666 3445567888888888776543
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.94 E-value=0.02 Score=43.09 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHHHHHHHhccccccccccCCcceeehHhH
Q 019825 52 IVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITFVIALPFGLETVDIKGISGKAKVVGTLV 113 (335)
Q Consensus 52 ~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l 113 (335)
+.....++.++..++++.|.+.+-.+ ..+..+.+.+++.+++||+++..+ +.|+.+
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 33446888999999999999999655 559999999999999999999997 888764
No 93
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.81 E-value=0.013 Score=45.49 Aligned_cols=63 Identities=16% Similarity=0.266 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHh-hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHH
Q 019825 52 IVGTSLTQYFFLLGIQYTSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 121 (335)
Q Consensus 52 ~~~~~~~~~~~~~al~~~~~~~a~~i~-~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li 121 (335)
+++ -.+...|++.+...+.+.+..+. ++.=++|++.++++.+|..+++. ++|+.+.++|+.++
T Consensus 49 ~lN-q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 49 LLN-QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HHH-HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 344 47788899999999999999996 58999999999888878778776 99999999998765
No 94
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=95.67 E-value=0.014 Score=49.47 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=61.4
Q ss_pred HHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccch
Q 019825 236 LCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEM 302 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~ 302 (335)
.+.+.|..++++++++.++.+...+-.+..+++++++|+++...+++..++.+.|++++.+..+..+
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 4578889999999999999999999999999999999999999999999999999999987665544
No 95
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.29 E-value=0.051 Score=47.96 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=67.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
++.-...-+..+++...+.+.+-..++...+...-+++.++.|.+.++.++++++|+++..| |.++...+.+.+
T Consensus 205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsa 278 (292)
T COG5006 205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASA 278 (292)
T ss_pred ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHh
Confidence 45666667788888888999999999999999999999999999999999999999999998 999888777665
Q ss_pred HHH
Q 019825 120 LLT 122 (335)
Q Consensus 120 li~ 122 (335)
=..
T Consensus 279 G~~ 281 (292)
T COG5006 279 GST 281 (292)
T ss_pred ccc
Confidence 433
No 96
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.66 E-value=1 Score=41.26 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhccCCCchhHHH--HHHHHHHHHHHHHHHHhccCCCc--ccccchhHHHHHHHHHHHHH
Q 019825 159 TIALTVGTLLWASWFPIQSYIGKRYPCKYSSTA--ILSLFGAIQAAILCLATNRNHSA--WSFKGKIEIISVLYAGIVGS 234 (335)
Q Consensus 159 ~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~ 234 (335)
..-++.=+++..+..+..|.....|+-|..... ++++.+.+.....-...--+++. ++.........+++.+-
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~--- 90 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM--- 90 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH---
Confidence 344444445555566777887777664444444 88888777665554432222222 22111111223333332
Q ss_pred HHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 235 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
.+.-.+++|+++.....++-..+|++.++.+.+++|.+++...+.....+++|......
T Consensus 91 ---i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 91 ---LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred ---HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 33345889999999999999999999999999999999999999999999999887653
No 97
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.40 E-value=0.035 Score=50.61 Aligned_cols=126 Identities=15% Similarity=0.184 Sum_probs=91.5
Q ss_pred CCchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHH
Q 019825 152 TERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGI 231 (335)
Q Consensus 152 ~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 231 (335)
..++..|.++++.+.+.-+....+.|+-.++... . ..-.......+.. . .+.+.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~--------------~~ra~~gg~~yl~-~-----~~Ww~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----S--------------GLRAGEGGYGYLK-E-----PLWWAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----h--------------cccccCCCcchhh-h-----HHHHHHH
Confidence 4556689999999999999999998887665211 0 0100111112211 1 2223455
Q ss_pred HHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccc
Q 019825 232 VGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
+..+++-.+-+.+....+++.++.+..++.+++.+++..+++|++++...+|.++.+.|..++.....++
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 5556667777777788899999999999999999999999999999999999999999988887554444
No 98
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.39 E-value=0.12 Score=48.22 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccc
Q 019825 235 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
.++.+.++.++.+++++..+++...+-+|+..++..+.+|++++.+.++..+-++|++++...+.+.
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 6788999999999999999999999999999999999999999999999999999999998775544
No 99
>PRK02237 hypothetical protein; Provisional
Probab=92.65 E-value=0.74 Score=35.17 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=40.4
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 253 TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 253 ~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
-+.+.-...+.++++++.+.|++|+.+.++|.++++.|+.++.+.+|
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 35566677788899999999999999999999999999988876554
No 100
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.82 E-value=0.74 Score=37.28 Aligned_cols=97 Identities=11% Similarity=0.138 Sum_probs=69.2
Q ss_pred CchHHHHHHHHHHH-------hhccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhh-hhHHHHH
Q 019825 16 PHCQCFIFRHLSYK-------LACRN-SRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFIN-MVPVITF 86 (335)
Q Consensus 16 ~p~~~~~~R~~~a~-------~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pl~~~ 86 (335)
+|+.-+++-+..+. +..++ +....+ +..+|.+.-|+++. ..-.+..+.....+++.+..+.- -+-+...
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG~-~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl 106 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLGV-FFVLSNIILVPRLGAALTTILIVAGQLIASL 106 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 49999999888888 22222 222222 33445556888885 88888999999999998876655 5666667
Q ss_pred HHHHH----hccccccccccCCcceeehHhHHHHhHHH
Q 019825 87 VIALP----FGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 87 lla~~----~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
++..+ .-|+++++.+ +.|+.+.++|+.+
T Consensus 107 ~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 107 LIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 77764 3567778776 9999999999864
No 101
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.58 E-value=0.87 Score=42.25 Aligned_cols=145 Identities=12% Similarity=0.087 Sum_probs=87.0
Q ss_pred CchhHHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhcc--CC-CcccccchhHHHHHHHH
Q 019825 153 ERWTFGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR--NH-SAWSFKGKIEIISVLYA 229 (335)
Q Consensus 153 ~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~ 229 (335)
++...|+++..+++++.+.+.+-.||.. +. + .+.......+-..+..|....... +. ......+...+......
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkvk-~W-s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKVK-GW-S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhcC-Cc-c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 3456899999999999999999999863 32 3 333333333333334454433221 11 11122233344454555
Q ss_pred HHHHHHHHHHHHHHHhhccCceeh-hhhhhHHHHHHHHHHHHHhcC-------ccchhHHHHHHHHHHhhhheeeccccc
Q 019825 230 GIVGSGLCYVGLTWCVKKKGPVFT-AAFSPLVQIMAAMFDIPLLHE-------RLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 230 g~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge-------~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
|++- +++-..|-.++|+++.+.. ++..-+.-+++.++--++.|+ +-....++|.++++.|+.+.-+...++
T Consensus 80 G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 6655 4677788899999887543 344445556666665444332 223467899999999999987654433
No 102
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=91.34 E-value=0.44 Score=36.29 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=39.6
Q ss_pred hhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 254 AAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 254 s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+.+.-.-.+.+.++++.+-|++|+.+.++|..+++.|+.++.+.+|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4455566778889999999999999999999999999999987654
No 103
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=91.16 E-value=0.13 Score=45.03 Aligned_cols=59 Identities=7% Similarity=0.022 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 56 SLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 56 ~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
.....+..+.++|.++..-+....+.++++.+++.++++|+++..+ +.|+.+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeEe
Confidence 4666778899999999999999999999999999999999999998 9999998887653
No 104
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.06 E-value=6.9 Score=35.80 Aligned_cols=140 Identities=9% Similarity=-0.012 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhc--------cCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHH
Q 019825 156 TFGTIALTVGTLLWASWFPIQSYIGK--------RYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVL 227 (335)
Q Consensus 156 ~~G~~~~l~aa~~~a~~~~~~k~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 227 (335)
....+++..--..+-.+.++++++.. ++.++....+.+.+.+.++........... . .....|+.-.
T Consensus 13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~--~---~~~apl~~y~ 87 (327)
T KOG1581|consen 13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE--L---SGVAPLYKYS 87 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc--C---CCCCchhHHh
Confidence 34455555555556667777777643 234666677777777777774444332221 1 1223355555
Q ss_pred HHHHHHHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccc
Q 019825 228 YAGIVGSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 228 ~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
+.++ ...++-.+.+-++|+++=.+-.+.-...-+-.++++.++.+.+.++..++-..++-.|+.+....++..
T Consensus 88 ~is~-tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 88 LISF-TNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHH-HhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 5565 556777788899999999888888888888899999999999999999999999999998888776554
No 105
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=90.76 E-value=3.2 Score=38.00 Aligned_cols=125 Identities=9% Similarity=0.086 Sum_probs=85.4
Q ss_pred HHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhcc-CCC-cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 019825 175 IQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNR-NHS-AWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVF 252 (335)
Q Consensus 175 ~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 252 (335)
+.|+..++++=|...+-..+.+-.......-..... .+. .-...+..+.-.++-.++ ++++-..+-+++++++..+.
T Consensus 34 ~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSl 112 (349)
T KOG1443|consen 34 YFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSL 112 (349)
T ss_pred HhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeee
Confidence 344445555545655555554444333333332222 221 111222333434445555 77888889999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecccc
Q 019825 253 TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 300 (335)
Q Consensus 253 ~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~ 300 (335)
-++.-...+++..+++.++-=|++++.-.+=..++-.|+++..++..+
T Consensus 113 YTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq 160 (349)
T KOG1443|consen 113 YTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ 160 (349)
T ss_pred eeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc
Confidence 999999999999999999999999999888888888999999886644
No 106
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.35 E-value=0.33 Score=42.53 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHH
Q 019825 42 RILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLL 121 (335)
Q Consensus 42 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li 121 (335)
..|..+.+.++.+. +++.+.+.-..+-+|-.-+++..+--+|+++.+.++++.+++.+| |.|..+.+.|...=
T Consensus 239 ~~~~~l~l~ai~s~-LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 239 YVFWDLTLLAIASC-LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHHH-hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhH
Confidence 55677778888884 899999999999999999999999999999999999999999999 99999999998775
Q ss_pred Hh
Q 019825 122 TL 123 (335)
Q Consensus 122 ~~ 123 (335)
..
T Consensus 312 ~~ 313 (337)
T KOG1580|consen 312 VV 313 (337)
T ss_pred hh
Confidence 54
No 107
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=89.32 E-value=2 Score=32.58 Aligned_cols=47 Identities=15% Similarity=0.194 Sum_probs=40.6
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccc
Q 019825 253 TAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 253 ~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
-+...-...+.+.++.+++-|.+|+.+.++|.++.++|+.++.+..+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34566677888899999999999999999999999999988887654
No 108
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=86.38 E-value=1.2 Score=40.07 Aligned_cols=63 Identities=16% Similarity=0.058 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 235 GLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
..+-.+.+.++..++++...++.-...+++.+++.-+++.+++..||+|+..+.+|++++-..
T Consensus 97 i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 97 IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 344556677888899999999999999999999999999999999999999999999988543
No 109
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=84.79 E-value=26 Score=31.47 Aligned_cols=160 Identities=9% Similarity=-0.018 Sum_probs=86.1
Q ss_pred CCCchHHHHHHHHHHH------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHH-H
Q 019825 14 AVPHCQCFIFRHLSYK------LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVIT-F 86 (335)
Q Consensus 14 ~~~p~~~~~~R~~~a~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~-~ 86 (335)
.-+++.+.++...... ...+. .++ -+.+-++.|.+= +.++.+-...++..+.+....+-++.-+.+ -
T Consensus 24 ~gDg~~fQw~~~~~i~~~g~~v~~~~~-~p~----f~p~amlgG~lW-~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw 97 (254)
T PF07857_consen 24 TGDGFFFQWVMCSGIFLVGLVVNLILG-FPP----FYPWAMLGGALW-ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGW 97 (254)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhcC-CCc----ceeHHHhhhhhh-hcCceeehhHhhhhhhHHHHHHHHHHHHHHHH
Confidence 3466666666555444 12222 222 233344555555 588889999999999999998888644444 4
Q ss_pred HHHHH-hcccccccc--ccCCcceeehHhHHHHhHHHHHhhcCCCccc---------ccc---cchhhhhhh-cccCCC-
Q 019825 87 VIALP-FGLETVDIK--GISGKAKVVGTLVCIGGAMLLTLYKGMPLFD---------HSY---SQAETAINV-MHMHPT- 149 (335)
Q Consensus 87 lla~~-~~~e~~~~~--~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~---------~~~---~~~~~~~~~-~~~~~~- 149 (335)
..+++ +++++.... ... .++|++++++|..+....+.+.... ..| +..+...+. +++..+
T Consensus 98 ~~grfGlFg~~~~~~~~~~L---n~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~ 174 (254)
T PF07857_consen 98 ASGRFGLFGLDPQVPSSPWL---NYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDE 174 (254)
T ss_pred HHhhceeccccccccchhHH---HHHHHHHHHHHHHheeeecCCCCCccccccccccccccccccccccccccccccccc
Confidence 44433 344333221 100 1677777777776665433332110 000 000000000 000000
Q ss_pred -CCCCchhHHHHHHHHHHHHHHhHHHHHHHhhcc
Q 019825 150 -RKTERWTFGTIALTVGTLLWASWFPIQSYIGKR 182 (335)
Q Consensus 150 -~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~ 182 (335)
+...+...|..+++++.+.|+...+=..++.++
T Consensus 175 l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 175 LSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred cccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 011246789999999999999988887777655
No 110
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=84.66 E-value=2 Score=32.74 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHhh-hhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 48 FFSAIVGTSLTQYFFLLGIQYTSATFACAFIN-MVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 48 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
.+.-+++. .+..+||.-++..+.+.+..+.+ +.-.|+...+..+..|...++. +.|..+.++|+.+++
T Consensus 56 ~iPFllNq-cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 56 LIPFLLNQ-CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHH-hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence 34444554 66788999999999999998877 6778888888776555445555 999999999988764
No 111
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=84.29 E-value=0.31 Score=43.66 Aligned_cols=29 Identities=7% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHhccccc-cccccCCcceeehHhHHHHhHHH
Q 019825 86 FVIALPFGLETV-DIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 86 ~lla~~~~~e~~-~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
+++-..++|+|+ -+.. ..++++.++-.++
T Consensus 65 IIiIImlF~RrLLCPLG------lLCiilimi~lLv 94 (381)
T PF05297_consen 65 IIIIIMLFKRRLLCPLG------LLCIILIMIVLLV 94 (381)
T ss_dssp ------------------------------------
T ss_pred HHHHHHHHHHhhcCcch------HHHHHHHHHHHHH
Confidence 333334455554 4444 5665555444333
No 112
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=82.23 E-value=0.53 Score=42.79 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=69.3
Q ss_pred HHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccC-----CCc------ccccchhHHHHHHHHHH
Q 019825 163 TVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRN-----HSA------WSFKGKIEIISVLYAGI 231 (335)
Q Consensus 163 l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~------~~~~~~~~~~~l~~~g~ 231 (335)
+++.+||+.+...+|-..++..- ...+.|=+.++.++...+..++-++ +.. ....+...+...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 46778999999888887665322 1234444444444443333332221 111 11222223333334444
Q ss_pred HHHHHHHHHHHHHhhccCceehhhhhh-HHHHHHHHHHHHHhcCccc--hhHHHHHHHHHHhhhheee
Q 019825 232 VGSGLCYVGLTWCVKKKGPVFTAAFSP-LVQIMAAMFDIPLLHERLH--IGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ge~~~--~~~~~G~~lii~g~~l~~~ 296 (335)
.--++..+..+++...+.+.+-++.. +..+++.++.|+ ...+.+ ..-+.|.+++++++++-..
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~ 146 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAA 146 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHH
Confidence 44577788888888877766554442 233445555553 334333 3555688777777776543
No 113
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=80.20 E-value=67 Score=32.10 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=16.9
Q ss_pred hhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhh
Q 019825 256 FSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI 293 (335)
Q Consensus 256 ~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l 293 (335)
.....|+-+.++|.+.-.-.......++++.++.+..+
T Consensus 352 ~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 33445666666665543333333333333333333333
No 114
>PRK02237 hypothetical protein; Provisional
Probab=78.16 E-value=12 Score=28.70 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHh-hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 47 LFFSAIVGTSLTQYFFLLGIQY-TSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 47 ~~~~g~~~~~~~~~~~~~al~~-~~~~~a~~i~-~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
+.+.|.+.. ..+ -+...++- ...+.+-..+ ....+...+-.|..-|+|+++.+ ++|..++++|+.++.+
T Consensus 35 ~~~pg~~~L-~lf-g~llTl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 35 WLLPGALSL-ALF-GWLLTLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHH-HHH-HHHHhcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 445555443 222 23333443 3344443333 36666667888888999999999 9999999999999874
No 115
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=77.64 E-value=42 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=20.4
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHH--hhhhee
Q 019825 265 AMFDIPLLHERLHIGSLLGSITVII--GLYILL 295 (335)
Q Consensus 265 ~l~~~~~~ge~~~~~~~~G~~lii~--g~~l~~ 295 (335)
-.+|..++.+..-+....|..+.++ |.....
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La 165 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLA 165 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3456677788887888888877553 444443
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.49 E-value=16 Score=27.93 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=41.5
Q ss_pred HHHhhccchhHHHHHh-hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 63 LLGIQYTSATFACAFI-NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 63 ~~al~~~~~~~a~~i~-~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
...++-.+.+.+-..+ ....+...+-.+..-|++|++.+ ++|..++++|+.++.+
T Consensus 48 l~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 48 LLTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred HhhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 3334444445544333 36777778888888999999999 9999999999999874
No 117
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=76.74 E-value=0.72 Score=40.99 Aligned_cols=137 Identities=10% Similarity=0.020 Sum_probs=91.8
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHhhcc-CCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHH
Q 019825 154 RWTFGTIALTVGTLLWASWFPIQSYIGKR-YPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIV 232 (335)
Q Consensus 154 ~~~~G~~~~l~aa~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 232 (335)
+.++|..+.-.=+++-...+.....+.++ ...|..-+|.....-+++-.++.++..+ ... .-|..-+.+++
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~---~~~----~~~~hYilla~- 86 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK---YIK----AKWRHYILLAF- 86 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH---HHH----HHHHHhhheeE-
Confidence 33455555544444444445555555444 2345666676666666777777766432 111 11222222233
Q ss_pred HHHHHHHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 233 GSGLCYVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
.-+=+.++...|.++++-+.+.++.--..+..++++|++++.+-.+.++.|.++.+.|++++....
T Consensus 87 ~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sD 152 (336)
T KOG2766|consen 87 VDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSD 152 (336)
T ss_pred EeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEee
Confidence 334566677789999999999999999999999999999999999999999999999999887543
No 118
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.36 E-value=4.9 Score=36.28 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHhccC-----CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCceehhhhhh
Q 019825 184 PCKYSSTAILSLFGAIQAAILCLATNRN-----HSAWSFKGKIEIISVLYAGIVGSGLCYVGLTWCVKKKGPVFTAAFSP 258 (335)
Q Consensus 184 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 258 (335)
+.|..++.++.+....++..+.-..... .+..+..-.... -++=+.+ .-.....+-++++++++.+.--+-..
T Consensus 59 d~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r-~vlplsv-Vfi~mI~fnnlcL~yVgVaFYyvgRs 136 (347)
T KOG1442|consen 59 DAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATAR-QVLPLSV-VFILMISFNNLCLKYVGVAFYYVGRS 136 (347)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHH-hhcchhh-eeeeehhccceehhhcceEEEEeccc
Confidence 3567788888888777766554433221 111111111111 1111111 11334456678999999999999999
Q ss_pred HHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 259 LVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 259 ~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
+..+|++++.+++++++-+...+.+..+++.|..+-..
T Consensus 137 LttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvd 174 (347)
T KOG1442|consen 137 LTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVD 174 (347)
T ss_pred hhhhHHHHhHHhhcccccccccceeehhheehheeccc
Confidence 99999999999999999999999999999999887543
No 119
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=73.02 E-value=5.4 Score=30.42 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=26.6
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 265 AMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 265 ~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
..+++++++|++++..+.|.++++++++.+.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 3567888999999999999999999887653
No 120
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.95 E-value=17 Score=27.31 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=27.6
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHHhhhheee
Q 019825 265 AMFDIPLLHERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 265 ~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~ 296 (335)
..++++.++|++.+.++.|..++.+|++.+.+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 35688889999999999999999999887653
No 121
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=62.35 E-value=1.2e+02 Score=32.03 Aligned_cols=44 Identities=18% Similarity=0.037 Sum_probs=29.3
Q ss_pred hhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 71 ATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 71 ~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
.+.+.++..+.|+-.++++.....+|.+... +.+.+-.++|.+.
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t 53 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAIS 53 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHH
Confidence 3567788889999999999888766653332 4444444455443
No 122
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=62.25 E-value=34 Score=31.01 Aligned_cols=78 Identities=18% Similarity=0.160 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 40 TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 40 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
+++.....++.+..+. ++..+...=++.-++..++.+...---.|.+++.+++.++++... ..+..+.+.|+.
T Consensus 256 p~~tyGy~~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~ 328 (367)
T KOG1582|consen 256 PVRTYGYAFLFSLAGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIY 328 (367)
T ss_pred cHhHHHHHHHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHH
Confidence 5677788888888775 777766666777888899999888889999999999999999987 778888889998
Q ss_pred HHHhh
Q 019825 120 LLTLY 124 (335)
Q Consensus 120 li~~~ 124 (335)
+=+..
T Consensus 329 Ln~ys 333 (367)
T KOG1582|consen 329 LNMYS 333 (367)
T ss_pred hhccc
Confidence 87653
No 123
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=61.53 E-value=36 Score=33.34 Aligned_cols=48 Identities=6% Similarity=0.058 Sum_probs=30.6
Q ss_pred ehhhhhhHHHHHHHHHHHHHhcC-----ccchhHHHHHHHHHHhhhheeeccc
Q 019825 252 FTAAFSPLVQIMAAMFDIPLLHE-----RLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 252 ~~s~~~~~~pv~~~l~~~~~~ge-----~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
...++..+.-+.=+++..+--.+ .++..|++.+.++++|++++.+.++
T Consensus 225 lf~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 225 LFGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred HHHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHHhhc
Confidence 34555555555555555431111 2788999999999999887765443
No 124
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.60 E-value=42 Score=27.50 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=59.3
Q ss_pred CchHHHHHHHHHHH------hhccCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-hhhhHHHHH
Q 019825 16 PHCQCFIFRHLSYK------LACRNSRPKL--TLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAF-INMVPVITF 86 (335)
Q Consensus 16 ~p~~~~~~R~~~a~------~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i-~~~~Pl~~~ 86 (335)
+|+...+.-+..+. .+.+.+++.. ..+..+|.+.-|+++. ..-...........++....+ ..-+-+...
T Consensus 33 spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa-~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl 111 (150)
T COG3238 33 SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGA-IFVTSSILLAPRLGAATTIALVIAGQLIMGL 111 (150)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhh-hhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence 58888888888777 1122222222 2344556667777774 655666666666666666544 444555555
Q ss_pred HHHHHh-c---cccccccccCCcceeehHhHHHHhHHHH
Q 019825 87 VIALPF-G---LETVDIKGISGKAKVVGTLVCIGGAMLL 121 (335)
Q Consensus 87 lla~~~-~---~e~~~~~~~~~~~k~~g~~l~~~Gv~li 121 (335)
++-.+= + +++++..+ +.|+++.++|+.++
T Consensus 112 liD~fG~~g~~~~~~~~~r------~lgi~L~l~gil~~ 144 (150)
T COG3238 112 LIDHFGWFGVPKRPLNLPR------ILGILLVLAGILLA 144 (150)
T ss_pred HHHhhcccCCCcCCCCHHH------HHHHHHHHHHHHHh
Confidence 554332 2 35556654 99999999994444
No 125
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=58.29 E-value=5.8 Score=32.08 Aligned_cols=28 Identities=11% Similarity=0.176 Sum_probs=20.8
Q ss_pred HhhccCceehhhhhhHHHHHHHHHHHHH
Q 019825 244 CVKKKGPVFTAAFSPLVQIMAAMFDIPL 271 (335)
Q Consensus 244 ~~~~~~~~~~s~~~~~~pv~~~l~~~~~ 271 (335)
++...+....+.+.|+.|.++++++.++
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677888899999988887654
No 126
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=57.25 E-value=62 Score=28.52 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=54.7
Q ss_pred HHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecccc
Q 019825 240 GLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNK 300 (335)
Q Consensus 240 ~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~ 300 (335)
.-.+++++++...-.++-+++.+..+.....+||.+.+.......++++...+...|...+
T Consensus 84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q 144 (309)
T COG5070 84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQ 144 (309)
T ss_pred hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhh
Confidence 3458899999999999999999999999999999999999999999999998888876543
No 127
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=56.98 E-value=19 Score=27.53 Aligned_cols=57 Identities=16% Similarity=0.218 Sum_probs=40.9
Q ss_pred HHHHHHhhccCceehhhhh-hHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhhee
Q 019825 239 VGLTWCVKKKGPVFTAAFS-PLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILL 295 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~s~~~-~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~ 295 (335)
.+|++-+.+.+-+.+..+. .+.-.++.+.+..+-.|...-..++|..++++|+.++.
T Consensus 67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 4455666777766665554 45677888889765555566778899999999998764
No 128
>PF15471 TMEM171: Transmembrane protein family 171
Probab=53.85 E-value=10 Score=33.95 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHhhhheeeccccc
Q 019825 278 IGSLLGSITVIIGLYILLWGKNKE 301 (335)
Q Consensus 278 ~~~~~G~~lii~g~~l~~~~~~~~ 301 (335)
..|++|-++++.|++......-|+
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKK 184 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKK 184 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeee
Confidence 368999999999988776554443
No 129
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=53.08 E-value=1.7e+02 Score=26.88 Aligned_cols=77 Identities=9% Similarity=-0.019 Sum_probs=42.8
Q ss_pred eehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHh-------HHHHHHH-h
Q 019825 108 VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWAS-------WFPIQSY-I 179 (335)
Q Consensus 108 ~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~-------~~~~~k~-~ 179 (335)
+.++.++..|+..+.. .-+ .........|..+..++.+.|.. ..+..++ .
T Consensus 7 ~f~~~mGtg~l~~~~~-~~~---------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~ 64 (330)
T PF03595_consen 7 WFGMVMGTGGLSNLLY-LLP---------------------YHFGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAF 64 (330)
T ss_dssp GGHHHHHHHHHHHHHH-TTT---------------------TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH-HHH---------------------HhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 8888999988888873 111 12234445677777666666665 2222222 2
Q ss_pred hccCCCchhHHHHHHHHHHHHHHHHHH
Q 019825 180 GKRYPCKYSSTAILSLFGAIQAAILCL 206 (335)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~i~~~~~~~ 206 (335)
.++..+|....++.....+...+....
T Consensus 65 ~~el~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 65 KAELRHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HHHHHSTTGGGGGGHHHHHHHHHHHHH
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 223345666666665555555544433
No 130
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=50.85 E-value=38 Score=25.80 Aligned_cols=39 Identities=10% Similarity=0.204 Sum_probs=32.4
Q ss_pred hhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 79 NMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 79 ~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
........+-.++.-|.++++++ ++|..++++|+.++.+
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 35666666777778899999999 9999999999888874
No 131
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=50.40 E-value=2.2e+02 Score=26.72 Aligned_cols=7 Identities=0% Similarity=-0.392 Sum_probs=3.1
Q ss_pred HHHHHHH
Q 019825 201 AAILCLA 207 (335)
Q Consensus 201 ~~~~~~~ 207 (335)
++|..++
T Consensus 41 ~lP~liF 47 (385)
T PF03547_consen 41 FLPALIF 47 (385)
T ss_pred HHHHHHH
Confidence 4444444
No 132
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=50.07 E-value=18 Score=32.73 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhc-cCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeeccccchhh
Q 019825 236 LCYVGLTWCVKK-KGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGKNKEMQN 304 (335)
Q Consensus 236 ~~~~~~~~~~~~-~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~~~~~~~ 304 (335)
....+-+++++. ++...--++..-.++..+.+++++.|.+-+..|+....++-+|+++....+.++.+.
T Consensus 76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 344566677775 566777778888999999999999999999999999999999999999887776554
No 133
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=49.52 E-value=2.2e+02 Score=27.77 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=19.0
Q ss_pred cCccchhHHHHHHHHHHhhhheeeccc
Q 019825 273 HERLHIGSLLGSITVIIGLYILLWGKN 299 (335)
Q Consensus 273 ge~~~~~~~~G~~lii~g~~l~~~~~~ 299 (335)
+..-+...++|.++.++.+.....+..
T Consensus 280 ~~~~~~~~iig~i~~~~~v~yss~ra~ 306 (429)
T PF03348_consen 280 GSWNTWQSIIGLIFTFVSVLYSSFRAS 306 (429)
T ss_pred CCcchHHHHHHHHHHHHHHHHhccccc
Confidence 334566778999998888877765443
No 134
>PRK11010 ampG muropeptide transporter; Validated
Probab=45.04 E-value=3.1e+02 Score=26.87 Aligned_cols=54 Identities=19% Similarity=0.109 Sum_probs=23.7
Q ss_pred HhhccCceehhhhhhHHHHHHH----HHHHHHhcCccchhHHHHHHHHHHhhhheeec
Q 019825 244 CVKKKGPVFTAAFSPLVQIMAA----MFDIPLLHERLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 244 ~~~~~~~~~~s~~~~~~pv~~~----l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
.-++.+.+..+..+...-+-.. +.+++.-.--.....++..++.+.|+.+..+.
T Consensus 345 ~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 345 CNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555443332222 22333221113334455566666666555443
No 135
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=43.18 E-value=2e+02 Score=25.64 Aligned_cols=37 Identities=8% Similarity=-0.013 Sum_probs=20.8
Q ss_pred HHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccch
Q 019825 242 TWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHI 278 (335)
Q Consensus 242 ~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~ 278 (335)
..+.++.++........++=.+-++-..+++.-.-+.
T Consensus 113 ~vcy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~ 149 (249)
T PF10225_consen 113 AVCYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDP 149 (249)
T ss_pred HhhcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 3444577777766666666655555555554444333
No 136
>PF15102 TMEM154: TMEM154 protein family
Probab=42.30 E-value=32 Score=27.96 Aligned_cols=23 Identities=13% Similarity=0.249 Sum_probs=12.7
Q ss_pred HHHHHHHHhhhheeeccccchhh
Q 019825 282 LGSITVIIGLYILLWGKNKEMQN 304 (335)
Q Consensus 282 ~G~~lii~g~~l~~~~~~~~~~~ 304 (335)
++.++++..++++.+.|||+.|+
T Consensus 67 LLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHheeEEeecccCC
Confidence 34445555566666665555544
No 137
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=40.83 E-value=3.3e+02 Score=25.92 Aligned_cols=23 Identities=30% Similarity=0.423 Sum_probs=16.0
Q ss_pred CccchhHHHHHHHHHHhhhheee
Q 019825 274 ERLHIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 274 e~~~~~~~~G~~lii~g~~l~~~ 296 (335)
...+..+-.+.+++..+++....
T Consensus 161 ~~~~~~~s~~~avv~i~~Y~lfL 183 (368)
T COG0387 161 GNFSLGQSLFVAVVLIALYGLFL 183 (368)
T ss_pred CcchHhHHHHHHHHHHHHHHHHH
Confidence 34556777888888888777643
No 138
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=40.16 E-value=42 Score=22.82 Aligned_cols=17 Identities=35% Similarity=0.778 Sum_probs=15.0
Q ss_pred eeehHhHHHHhHHHHHh
Q 019825 107 KVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 107 k~~g~~l~~~Gv~li~~ 123 (335)
|++|+++.+.|+.++..
T Consensus 1 kiigi~Llv~GivLl~~ 17 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYF 17 (59)
T ss_pred CeeeehHHHHHHHHHHh
Confidence 58899999999999885
No 139
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=39.95 E-value=3.5e+02 Score=26.08 Aligned_cols=64 Identities=16% Similarity=0.168 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHH--hhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q 019825 226 VLYAGIVGSGLCYVGLTWC--VKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVII 289 (335)
Q Consensus 226 l~~~g~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~ 289 (335)
.+..|++++.+++.....- +|.=++..+-.+=...=+++.++.-++-++..-..|++|.+.++.
T Consensus 296 A~iiG~iag~v~~~~~~~~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~~~~~l~~Ql~g~~~~~~ 361 (404)
T TIGR03644 296 ATLIGAVGGVIVVFSIVLLDKLKIDDPVGAISVHGVAGIWGTLVVPITNGDASFGAQLIGAATIFA 361 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCcCchHhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3344555656665554322 222344444333333335555544444334344568888777654
No 140
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=38.93 E-value=2.4e+02 Score=23.90 Aligned_cols=25 Identities=12% Similarity=0.067 Sum_probs=18.7
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHH
Q 019825 265 AMFDIPLLHERLHIGSLLGSITVII 289 (335)
Q Consensus 265 ~l~~~~~~ge~~~~~~~~G~~lii~ 289 (335)
-.+|..++.|..-+..+.|..+.++
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvA 156 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVA 156 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457777888888888888887654
No 141
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=38.75 E-value=31 Score=27.61 Aligned_cols=14 Identities=14% Similarity=0.653 Sum_probs=6.6
Q ss_pred HHHHHHHHHhhhhe
Q 019825 281 LLGSITVIIGLYIL 294 (335)
Q Consensus 281 ~~G~~lii~g~~l~ 294 (335)
++|..++..|++.+
T Consensus 90 i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 90 IIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHH
Confidence 34445555554433
No 142
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=36.30 E-value=3.3e+02 Score=24.67 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=35.1
Q ss_pred hhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 71 ATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 71 ~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
=+..+++.....++....+.++.+++-+.+.++|+.-+=-+.+++=|.++
T Consensus 51 DGvYSl~da~mtllsL~vsrli~~~p~~~RF~~GfwhlEplvL~ing~ll 100 (314)
T COG3965 51 DGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVLAINGTLL 100 (314)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchhhhhhhHhhhccHHH
Confidence 35678888888888899999888766665777776655555555544433
No 143
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=34.97 E-value=1e+02 Score=23.65 Aligned_cols=47 Identities=11% Similarity=-0.003 Sum_probs=29.7
Q ss_pred ccchhHHHHHhhh-hHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHHH
Q 019825 68 YTSATFACAFINM-VPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAML 120 (335)
Q Consensus 68 ~~~~~~a~~i~~~-~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~l 120 (335)
.-++++--++.-. .-.....++.+++||++++.. +.|..+.+.++..
T Consensus 58 ~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~f 105 (108)
T PF04342_consen 58 TFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNY------LWAFLCILGAVYF 105 (108)
T ss_pred ccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHH------HHHHHHHHHhhhe
Confidence 3444444455442 333346677889999999997 7776666555544
No 144
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=34.79 E-value=18 Score=28.50 Aligned_cols=11 Identities=27% Similarity=0.416 Sum_probs=4.8
Q ss_pred HHHHHHHHhhh
Q 019825 282 LGSITVIIGLY 292 (335)
Q Consensus 282 ~G~~lii~g~~ 292 (335)
+|++++++.+.
T Consensus 75 aGvIg~Illi~ 85 (122)
T PF01102_consen 75 AGVIGIILLIS 85 (122)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444333
No 145
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=34.51 E-value=80 Score=25.20 Aligned_cols=15 Identities=33% Similarity=0.811 Sum_probs=9.8
Q ss_pred HHHHHHHHHhhhhee
Q 019825 281 LLGSITVIIGLYILL 295 (335)
Q Consensus 281 ~~G~~lii~g~~l~~ 295 (335)
..|.+-++.+.....
T Consensus 97 ~~G~~~i~l~~~~~~ 111 (136)
T PF08507_consen 97 LVGVIYIILGFFCPI 111 (136)
T ss_pred HHHHHHHHHHHHcCC
Confidence 467777777776543
No 146
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=34.08 E-value=27 Score=27.89 Aligned_cols=23 Identities=17% Similarity=0.137 Sum_probs=16.1
Q ss_pred CceehhhhhhHHHHHHHHHHHHH
Q 019825 249 GPVFTAAFSPLVQIMAAMFDIPL 271 (335)
Q Consensus 249 ~~~~~s~~~~~~pv~~~l~~~~~ 271 (335)
.....+.+.|+-|++.++++.++
T Consensus 66 ~~~~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 66 SLLKAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456677788888888877654
No 147
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=33.59 E-value=3.3e+02 Score=26.50 Aligned_cols=14 Identities=21% Similarity=0.411 Sum_probs=6.6
Q ss_pred HHHHHHHHHhhhhe
Q 019825 281 LLGSITVIIGLYIL 294 (335)
Q Consensus 281 ~~G~~lii~g~~l~ 294 (335)
+.|.+.++++++..
T Consensus 417 ~~~~~~~i~~~~~~ 430 (476)
T PLN00028 417 LMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 34545555544443
No 148
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=32.77 E-value=3.2e+02 Score=26.34 Aligned_cols=10 Identities=10% Similarity=0.082 Sum_probs=3.6
Q ss_pred HHHHHHHHHh
Q 019825 281 LLGSITVIIG 290 (335)
Q Consensus 281 ~~G~~lii~g 290 (335)
+++.++.+++
T Consensus 404 ~~~~~~~li~ 413 (455)
T TIGR00892 404 YASGSIVVSA 413 (455)
T ss_pred HHhhHHHHHH
Confidence 3333333333
No 149
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=32.17 E-value=22 Score=22.48 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=9.4
Q ss_pred cchhHHHHHHHHHHhhhh
Q 019825 276 LHIGSLLGSITVIIGLYI 293 (335)
Q Consensus 276 ~~~~~~~G~~lii~g~~l 293 (335)
|+|..++=.++++.|++.
T Consensus 2 p~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFA 19 (49)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 445555555555555543
No 150
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=31.88 E-value=4.1e+02 Score=25.68 Aligned_cols=40 Identities=18% Similarity=0.261 Sum_probs=23.4
Q ss_pred hhhhHHHHH-HHHHHhcc-ccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 78 INMVPVITF-VIALPFGL-ETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 78 ~~~~Pl~~~-lla~~~~~-e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
....|-+.. +++.++.+ -+...|. +..+++..+|.+++..
T Consensus 67 adi~P~l~~Kl~aP~fi~~v~y~~Ri------~~~~~l~~~g~l~va~ 108 (402)
T PF02487_consen 67 ADILPSLLVKLIAPFFIHRVPYWIRI------LICVALSAAGMLLVAF 108 (402)
T ss_pred HHHHHHHHHHHHhHhhhhhccchHHH------HHHHHHHHHHHhheee
Confidence 345565554 44444443 3445555 7777777787777764
No 151
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=31.69 E-value=3.6e+02 Score=23.79 Aligned_cols=137 Identities=14% Similarity=0.178 Sum_probs=71.8
Q ss_pred CCchHHHHHHHHHHH-hhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhhhhHHHHHHHHH-Hh
Q 019825 15 VPHCQCFIFRHLSYK-LACRNSRPKLTLRILFCLFFSAIVGTSLTQYFFLLGIQYTSATFACAFINMVPVITFVIAL-PF 92 (335)
Q Consensus 15 ~~p~~~~~~R~~~a~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pl~~~lla~-~~ 92 (335)
.+|......-.+... +..++..+..+......+...++.+..+...+..|..+..+......+..+.-+|..+-.. ..
T Consensus 58 ~~~~~vl~~a~l~~~~~~~~~~~~s~~~~~~~~~~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls~~g~~ 137 (233)
T COG0670 58 SPPGFVLIIAGLAGVFFLSRKINKSSPTALILFFVYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVFGALSLYGYT 137 (233)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444 3333322344555566666777777777777777777666644555555555554443333 23
Q ss_pred ccccccccccCCcceeehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhH
Q 019825 93 GLETVDIKGISGKAKVVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASW 172 (335)
Q Consensus 93 ~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~ 172 (335)
.|+.++... |.. ..+..|+.+..... -. -.........-.++.+.++.+
T Consensus 138 tk~Dls~l~-----~~l--~~aligLiiasvvn-~F-----------------------l~s~~l~~~IS~lgvlifsgl 186 (233)
T COG0670 138 TKRDLSSLG-----SFL--FMALIGLIIASLVN-IF-----------------------LGSSALHLAISVLGVLIFSGL 186 (233)
T ss_pred HhhhHHHHH-----HHH--HHHHHHHHHHHHHH-HH-----------------------HcCcHHHHHHHHHHHHHHHHH
Confidence 455555542 233 23333333333210 00 011136677777888888888
Q ss_pred HHHHHHhhcc
Q 019825 173 FPIQSYIGKR 182 (335)
Q Consensus 173 ~~~~k~~~~~ 182 (335)
.....+..++
T Consensus 187 i~yDtq~I~~ 196 (233)
T COG0670 187 IAYDTQNIKR 196 (233)
T ss_pred HHHHHHHHHH
Confidence 8887666555
No 152
>PRK10746 putative transport protein YifK; Provisional
Probab=29.89 E-value=5.2e+02 Score=25.17 Aligned_cols=28 Identities=18% Similarity=0.071 Sum_probs=18.1
Q ss_pred chhHHHHHHHHHHHHHHhHHHHHHHhhc
Q 019825 154 RWTFGTIALTVGTLLWASWFPIQSYIGK 181 (335)
Q Consensus 154 ~~~~G~~~~l~aa~~~a~~~~~~k~~~~ 181 (335)
....|..+.++..+.|..+....|...+
T Consensus 430 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 457 (461)
T PRK10746 430 SLFVGIIFLLAVTLIYKVFGLNRHGKAH 457 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcchh
Confidence 4456777777777777777666655443
No 153
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=29.52 E-value=4.4e+02 Score=25.76 Aligned_cols=134 Identities=13% Similarity=0.138 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHH-
Q 019825 157 FGTIALTVGTLLWASWFPIQSYIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKIEIISVLYAGIVGSG- 235 (335)
Q Consensus 157 ~G~~~~l~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~- 235 (335)
+|++.... .++|++...+...+..+ .++-..+....+.++++.+.+.... +. ..........|.+.+.
T Consensus 66 lG~i~s~f-~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs~----s~-----~~~~~l~~lng~fQg~G 134 (448)
T COG2271 66 LGILGSAF-SITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFSP----SL-----FLFAVLWVLNGWFQGMG 134 (448)
T ss_pred HHHHHHHH-HHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhhh----HH-----HHHHHHHHHHHHHhcCC
Confidence 45444333 46688888777776655 3444455555555666555444321 00 0111222223332211
Q ss_pred ---HHHHHHHHHhhccCceehh-------hhhhHHHHHHHHHHHHHhcC-ccchhHHHHHHHHHHhhhheeeccccch
Q 019825 236 ---LCYVGLTWCVKKKGPVFTA-------AFSPLVQIMAAMFDIPLLHE-RLHIGSLLGSITVIIGLYILLWGKNKEM 302 (335)
Q Consensus 236 ---~~~~~~~~~~~~~~~~~~s-------~~~~~~pv~~~l~~~~~~ge-~~~~~~~~G~~lii~g~~l~~~~~~~~~ 302 (335)
.+-....|--++..-+..+ +-..+.|+++.+ +++.++- .-......|++.++.|+++....+.+++
T Consensus 135 wpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 135 WPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred CcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 1111112222222222222 233444555544 5554443 2233345677778888887766555543
No 154
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=28.38 E-value=77 Score=25.75 Aligned_cols=44 Identities=7% Similarity=0.135 Sum_probs=28.6
Q ss_pred cchhHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhHHHHhHH
Q 019825 69 TSATFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAM 119 (335)
Q Consensus 69 ~~~~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~ 119 (335)
-++-.++.+.++.|+++.+++.++. +.+...+ .+.++.++.|..
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~La-~~L~~~e------~~~~~~~~lg~~ 115 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAILA-QYLFFSE------LIVIFGAFLGLA 115 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhh------HHHHHHHHHHHH
Confidence 3556678889999999998887763 4454444 444444444433
No 155
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=28.02 E-value=1.2e+02 Score=20.19 Aligned_cols=44 Identities=27% Similarity=0.529 Sum_probs=33.3
Q ss_pred eehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhcc
Q 019825 108 VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKR 182 (335)
Q Consensus 108 ~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~ 182 (335)
++|..+.++|+.++.+ .| .|.+..+++-...|......|+..+.
T Consensus 6 v~G~~lv~~Gii~~~l-PG------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLPL-PG------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hHHHHHHHHHHHhhcC-CC------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6788888888888775 22 36777788888888888888887653
No 156
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.62 E-value=1e+02 Score=23.77 Aligned_cols=29 Identities=10% Similarity=-0.166 Sum_probs=14.3
Q ss_pred hHHHHHHHHHHHHH---hcCccchhHHHHHHHHH
Q 019825 258 PLVQIMAAMFDIPL---LHERLHIGSLLGSITVI 288 (335)
Q Consensus 258 ~~~pv~~~l~~~~~---~ge~~~~~~~~G~~lii 288 (335)
....+++++++|++ +|.. +|.++...++-
T Consensus 53 IsGilVGa~iG~llD~~agTs--PwglIv~lllG 84 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTS--PWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCC--cHHHHHHHHHH
Confidence 33445666666664 3333 34444444433
No 157
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=27.48 E-value=77 Score=27.40 Aligned_cols=47 Identities=19% Similarity=0.345 Sum_probs=28.6
Q ss_pred CceehhhhhhHHHHHHHHHHHHHhcCccc-hhHHHHHHH-HHHhhhhee
Q 019825 249 GPVFTAAFSPLVQIMAAMFDIPLLHERLH-IGSLLGSIT-VIIGLYILL 295 (335)
Q Consensus 249 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~~-~~~~~G~~l-ii~g~~l~~ 295 (335)
.+...+.++.+.|..++.++..+-+--+. ..+++|.++ ++.|...+.
T Consensus 32 ~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 32 SNLIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 33555666667777777777665443333 356666555 556877664
No 158
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=26.18 E-value=3e+02 Score=22.80 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=47.6
Q ss_pred eehHhHHHHhHHHHHhhcCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHHHHHHHHHHhHHHHHHHhhccCC--C
Q 019825 108 VVGTLVCIGGAMLLTLYKGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIALTVGTLLWASWFPIQSYIGKRYP--C 185 (335)
Q Consensus 108 ~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~~~~k~~~~~~~--~ 185 (335)
-.+++.++.|.=+++..+-- .+ ..+...|..|..+.+++-+..+......--+.+++. -
T Consensus 92 slAVV~AIFGLElLmvSQvc-Ed------------------~~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~ 152 (184)
T PF15108_consen 92 SLAVVVAIFGLELLMVSQVC-ED------------------AHSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLI 152 (184)
T ss_pred HHHHHHHHHhHHHHHHHHHH-hc------------------chhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhh
Confidence 45567778887666653210 00 223567889999988887776665544444444432 3
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 019825 186 KYSSTAILSLFGAIQAAILC 205 (335)
Q Consensus 186 ~~~~~~~~~~~~~i~~~~~~ 205 (335)
.+++++|--+.+..+++.-+
T Consensus 153 GFTL~fWCeFtAsFLfFLN~ 172 (184)
T PF15108_consen 153 GFTLMFWCEFTASFLFFLNG 172 (184)
T ss_pred hhHHHHHHHHHHHHHHHHhh
Confidence 46777777777776654433
No 159
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=24.34 E-value=2.4e+02 Score=25.61 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=28.9
Q ss_pred ehhhhhhHHHHHHHHHHHHHhcC---------ccchhHHHHHHHHHHhhhheeec
Q 019825 252 FTAAFSPLVQIMAAMFDIPLLHE---------RLHIGSLLGSITVIIGLYILLWG 297 (335)
Q Consensus 252 ~~s~~~~~~pv~~~l~~~~~~ge---------~~~~~~~~G~~lii~g~~l~~~~ 297 (335)
....+.....+.=.++..+--.+ .+|..|++...+++.|+++..+.
T Consensus 213 ~~~~yli~Y~~~Rf~iEf~R~~~~~~~~~~~~~lt~~Q~~sl~~i~~g~~~~~~~ 267 (278)
T TIGR00544 213 IFGVYLIGYGIFRFIIEGLREPDLMLTEFSFLNISMGQILSLLMIAGILIIMLLA 267 (278)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchhhccccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 33455555555555555432111 26889999999999998876543
No 160
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=24.22 E-value=4.5e+02 Score=26.55 Aligned_cols=16 Identities=6% Similarity=-0.068 Sum_probs=8.0
Q ss_pred HHHHHhHHHHHHHhhc
Q 019825 166 TLLWASWFPIQSYIGK 181 (335)
Q Consensus 166 a~~~a~~~~~~k~~~~ 181 (335)
++.+...--+-+.+.+
T Consensus 70 ~vG~~~Gp~Ff~~l~~ 85 (562)
T TIGR03802 70 AIGYEVGPQFFASLKK 85 (562)
T ss_pred HhhhccCHHHHHHHHh
Confidence 4455555555555444
No 161
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=24.14 E-value=4.6e+02 Score=22.45 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc--h-------hHHHHHhhhhHHHHHHHHHHhccccccccccCCcceeehHhH
Q 019825 43 ILFCLFFSAIVGTSLTQYFFLLGIQYTS--A-------TFACAFINMVPVITFVIALPFGLETVDIKGISGKAKVVGTLV 113 (335)
Q Consensus 43 ~~~~~~~~g~~~~~~~~~~~~~al~~~~--~-------~~a~~i~~~~Pl~~~lla~~~~~e~~~~~~~~~~~k~~g~~l 113 (335)
-...+++.|+.+.+..+.+|++..++-. . ..+.+...+.--+...++-.++-..+++. +--+.+
T Consensus 126 GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~-------L~pi~l 198 (226)
T COG4858 126 GLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQ-------LPPIAL 198 (226)
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcC-------CchHHH
Confidence 3556777888887788888888888755 1 11111122111122334445666666665 777888
Q ss_pred HHHhHHHHHh
Q 019825 114 CIGGAMLLTL 123 (335)
Q Consensus 114 ~~~Gv~li~~ 123 (335)
.++|..++.+
T Consensus 199 ~IiGav~lal 208 (226)
T COG4858 199 TIIGAVILAL 208 (226)
T ss_pred HHHHHHHHHH
Confidence 8888777664
No 162
>PRK14397 membrane protein; Provisional
Probab=23.67 E-value=2.2e+02 Score=24.98 Aligned_cols=11 Identities=18% Similarity=-0.037 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q 019825 158 GTIALTVGTLL 168 (335)
Q Consensus 158 G~~~~l~aa~~ 168 (335)
|--..++..++
T Consensus 49 G~~~gilv~~~ 59 (222)
T PRK14397 49 GTKWGVLTLVC 59 (222)
T ss_pred chHHHHHHHHH
Confidence 44444443333
No 163
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.54 E-value=49 Score=23.03 Aligned_cols=22 Identities=27% Similarity=0.113 Sum_probs=14.5
Q ss_pred hHHHHHHHHHHhhhheeecccc
Q 019825 279 GSLLGSITVIIGLYILLWGKNK 300 (335)
Q Consensus 279 ~~~~G~~lii~g~~l~~~~~~~ 300 (335)
.-++++++++.|..++-...++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3467788888888777543333
No 164
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=23.20 E-value=71 Score=25.24 Aligned_cols=17 Identities=29% Similarity=0.522 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 019825 224 ISVLYAGIVGSGLCYVG 240 (335)
Q Consensus 224 ~~l~~~g~~~~~~~~~~ 240 (335)
..++..|++.+.++|.+
T Consensus 57 ~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 57 VVILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHHhhHhheeeEee
Confidence 44555677666666655
No 165
>PRK11469 hypothetical protein; Provisional
Probab=23.05 E-value=64 Score=27.48 Aligned_cols=44 Identities=9% Similarity=0.126 Sum_probs=29.2
Q ss_pred ehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHH-HHhhhhee
Q 019825 252 FTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITV-IIGLYILL 295 (335)
Q Consensus 252 ~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~li-i~g~~l~~ 295 (335)
..+.++.+.|..+...+..+-+-.+...+|+|..+. ..|..++.
T Consensus 42 ~~g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 42 IFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566788888888887665555556678777664 45776654
No 166
>PRK03893 putative sialic acid transporter; Provisional
Probab=22.86 E-value=6.8e+02 Score=24.00 Aligned_cols=8 Identities=38% Similarity=0.418 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q 019825 20 CFIFRHLS 27 (335)
Q Consensus 20 ~~~~R~~~ 27 (335)
+...|.+.
T Consensus 111 l~~~~~l~ 118 (496)
T PRK03893 111 LFIARLVI 118 (496)
T ss_pred HHHHHHHH
Confidence 33344443
No 167
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=22.77 E-value=7.1e+02 Score=24.18 Aligned_cols=31 Identities=16% Similarity=0.037 Sum_probs=15.4
Q ss_pred HHHHHHHhccccccccccCCcceeehHhHHHHhHHHHHh
Q 019825 85 TFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLTL 123 (335)
Q Consensus 85 ~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~ 123 (335)
..+++.++.+-|..- +..-+.+-+|+.++++
T Consensus 7 ~~~~~~~~~g~~~~~--------~~~~~~~~~~~~~~~~ 37 (433)
T PRK09412 7 IIVLLAIFLGARLGG--------IGIGFAGGLGVLILTF 37 (433)
T ss_pred HHHHHHHHHhHhhhH--------HHHHHHHHHHHHHHHH
Confidence 345555666655532 2223444556666654
No 168
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.44 E-value=1.6e+02 Score=22.29 Aligned_cols=32 Identities=9% Similarity=0.102 Sum_probs=24.3
Q ss_pred HHHHHHHhccccccccccCCcceeehHhHHHHhHHHHH
Q 019825 85 TFVIALPFGLETVDIKGISGKAKVVGTLVCIGGAMLLT 122 (335)
Q Consensus 85 ~~lla~~~~~e~~~~~~~~~~~k~~g~~l~~~Gv~li~ 122 (335)
...++.+.+||++++.. +.+..+...|+.++.
T Consensus 83 Fv~Fsvfyl~epl~~~~------l~a~~~i~gav~fiF 114 (116)
T COG3169 83 FVPFSVFYLKEPLRWNY------LWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHcCcchHHH------HHHHHHHHHHHHHhc
Confidence 35678888999999987 777776666666653
No 169
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=22.11 E-value=49 Score=27.20 Aligned_cols=20 Identities=5% Similarity=0.147 Sum_probs=11.7
Q ss_pred eehhhhhhHHHHHHHHHHHH
Q 019825 251 VFTAAFSPLVQIMAAMFDIP 270 (335)
Q Consensus 251 ~~~s~~~~~~pv~~~l~~~~ 270 (335)
.+.+.+.|+-|+++++.+..
T Consensus 75 lkaa~lvYllPLl~li~ga~ 94 (154)
T PRK10862 75 LRSALLVYMTPLVGLFLGAA 94 (154)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455666667766666543
No 170
>PF15345 TMEM51: Transmembrane protein 51
Probab=21.58 E-value=43 Score=29.44 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=15.3
Q ss_pred HHHHHHHHhhhheeeccccchhh
Q 019825 282 LGSITVIIGLYILLWGKNKEMQN 304 (335)
Q Consensus 282 ~G~~lii~g~~l~~~~~~~~~~~ 304 (335)
.|+++.++.+++-.+.|+|+++.
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq~ 89 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQG 89 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 46777777888777666655433
No 171
>PF14851 FAM176: FAM176 family
Probab=21.48 E-value=2.8e+02 Score=22.82 Aligned_cols=19 Identities=11% Similarity=0.025 Sum_probs=8.8
Q ss_pred HHHhhccCceehhhhhhHH
Q 019825 242 TWCVKKKGPVFTAAFSPLV 260 (335)
Q Consensus 242 ~~~~~~~~~~~~s~~~~~~ 260 (335)
.|+.-+-.|-.++++..+.
T Consensus 11 aya~I~~~PE~~aLYFv~g 29 (153)
T PF14851_consen 11 AYAHIRDNPERFALYFVSG 29 (153)
T ss_pred HHHHHHhChHHHHHHHHHH
Confidence 3333444555555554433
No 172
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=21.46 E-value=1e+02 Score=17.71 Aligned_cols=17 Identities=24% Similarity=0.186 Sum_probs=8.3
Q ss_pred cchhHHHHHHHHHHhhh
Q 019825 276 LHIGSLLGSITVIIGLY 292 (335)
Q Consensus 276 ~~~~~~~G~~lii~g~~ 292 (335)
-++..++|.+++..+.+
T Consensus 10 ~~~~~~~G~~l~~~~~~ 26 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGL 26 (34)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 34455666644444333
No 173
>PF14851 FAM176: FAM176 family
Probab=21.31 E-value=92 Score=25.62 Aligned_cols=16 Identities=19% Similarity=0.092 Sum_probs=7.2
Q ss_pred HHHHHHHHhhhheeec
Q 019825 282 LGSITVIIGLYILLWG 297 (335)
Q Consensus 282 ~G~~lii~g~~l~~~~ 297 (335)
+|.++.++-+++-.-+
T Consensus 32 ~GLlLtLcllV~risc 47 (153)
T PF14851_consen 32 AGLLLTLCLLVIRISC 47 (153)
T ss_pred HHHHHHHHHHHhhhee
Confidence 3444445554444333
No 174
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=21.29 E-value=6e+02 Score=22.79 Aligned_cols=16 Identities=6% Similarity=0.071 Sum_probs=6.6
Q ss_pred HHHHhHHHHHHHhhcc
Q 019825 167 LLWASWFPIQSYIGKR 182 (335)
Q Consensus 167 ~~~a~~~~~~k~~~~~ 182 (335)
+.+.+......++.++
T Consensus 41 ~~~~~~~~~~g~l~dr 56 (379)
T TIGR00881 41 IAYGISKFVMGSVSDR 56 (379)
T ss_pred HHHHhhhhhhhHHHHh
Confidence 3344444444444443
No 175
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=21.03 E-value=9e+02 Score=24.73 Aligned_cols=171 Identities=13% Similarity=0.010 Sum_probs=0.0
Q ss_pred cccccccccCCcceeehHhHHHHhHHHHHhh----cCCCcccccccchhhhhhhcccCCCCCCCchhHHHHHH-HHHHHH
Q 019825 94 LETVDIKGISGKAKVVGTLVCIGGAMLLTLY----KGMPLFDHSYSQAETAINVMHMHPTRKTERWTFGTIAL-TVGTLL 168 (335)
Q Consensus 94 ~e~~~~~~~~~~~k~~g~~l~~~Gv~li~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-l~aa~~ 168 (335)
+|++.+.+ ++|.++.+.|+.++... ......+ ++...++.+.. +..-+.
T Consensus 233 ~~~l~~lD------~IG~~L~~~Gl~LfLlgl~wgG~~~~~W--------------------~Sa~VIa~lviG~~~Lv~ 286 (599)
T PF06609_consen 233 REQLKELD------WIGIFLFIAGLALFLLGLSWGGYPYYPW--------------------KSAHVIAPLVIGFVLLVA 286 (599)
T ss_pred HHHHHHhh------HHHHHHHHHHHHHHHHHHhccCCCCCCC--------------------CCccchhhHHHHHHHHHH
Q ss_pred HHhHHHHHH--------HhhccCCCchhHHHHHHHHHHHHHHHHHHHhccCCCcccccchh---HHHHHHHHHHHHHHHH
Q 019825 169 WASWFPIQS--------YIGKRYPCKYSSTAILSLFGAIQAAILCLATNRNHSAWSFKGKI---EIISVLYAGIVGSGLC 237 (335)
Q Consensus 169 ~a~~~~~~k--------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~g~~~~~~~ 237 (335)
+++|-...+ ++.++ ...+.......++..........++.......-.++.. ....+....-+++..+
T Consensus 287 F~~wE~~~~~~~Pl~P~~Lf~~-~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g 365 (599)
T PF06609_consen 287 FVVWEWFGAPKDPLFPHRLFKD-RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAG 365 (599)
T ss_pred HHHhhhhccCCCCcCCHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHH
Q ss_pred HHHHHHHhhccCceehhhhhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhh
Q 019825 238 YVGLTWCVKKKGPVFTAAFSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYI 293 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l 293 (335)
..+.....++.+-.+-.++.. ..+.++.++.+-.-...+..+.+|. .++.|+..
T Consensus 366 ~~i~g~l~~~ir~~Kw~li~~-~~~~ta~~Gama~~~~~n~~~~i~~-~~l~g~gi 419 (599)
T PF06609_consen 366 AVILGLLFSKIRHIKWQLIFG-SVLMTAFCGAMAAVRPDNKNAAIAF-LVLAGFGI 419 (599)
T ss_pred HHHHHHHHHHccchhHHHHHH-HHHHHHHHHHHHHccCCCcchHHHH-HHHHHHhH
No 176
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=20.91 E-value=79 Score=19.65 Aligned_cols=18 Identities=22% Similarity=0.931 Sum_probs=10.1
Q ss_pred HHHHHHHHhhhheeeccc
Q 019825 282 LGSITVIIGLYILLWGKN 299 (335)
Q Consensus 282 ~G~~lii~g~~l~~~~~~ 299 (335)
+|.++++.+.+++.|.++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 345556666666654443
No 177
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=20.54 E-value=4e+02 Score=22.81 Aligned_cols=27 Identities=19% Similarity=0.432 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccC
Q 019825 223 IISVLYAGIVGSGLCYVGLTWCVKKKG 249 (335)
Q Consensus 223 ~~~l~~~g~~~~~~~~~~~~~~~~~~~ 249 (335)
++.++..|+++++.-|..|++..++.+
T Consensus 127 lItlll~a~vgGfamy~my~y~yr~~a 153 (226)
T COG4858 127 LITLLLTAVVGGFAMYIMYYYAYRMRA 153 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 445555555555555555555555554
No 178
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.47 E-value=1.4e+02 Score=21.35 Aligned_cols=43 Identities=5% Similarity=-0.013 Sum_probs=20.8
Q ss_pred hhhHHHHHHHHHHHHHhcCccchhHHHHHHHHHHhhhheeecc
Q 019825 256 FSPLVQIMAAMFDIPLLHERLHIGSLLGSITVIIGLYILLWGK 298 (335)
Q Consensus 256 ~~~~~pv~~~l~~~~~~ge~~~~~~~~G~~lii~g~~l~~~~~ 298 (335)
+..+.-+++.+.|++.-.-..+...+.+..++.+-+++-.|.-
T Consensus 16 il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~ 58 (76)
T PF06645_consen 16 ILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHh
Confidence 3444556667777654443444444444443333344444543
No 179
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=20.10 E-value=61 Score=23.85 Aligned_cols=20 Identities=35% Similarity=0.639 Sum_probs=13.8
Q ss_pred chhHHHHHHHHHHhhhheee
Q 019825 277 HIGSLLGSITVIIGLYILLW 296 (335)
Q Consensus 277 ~~~~~~G~~lii~g~~l~~~ 296 (335)
+...++|.++.++|.++...
T Consensus 3 N~~Fl~~l~lliig~~~~v~ 22 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFVF 22 (92)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 34567788888877776653
Done!