Query 019829
Match_columns 335
No_of_seqs 192 out of 915
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 07:43:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019829.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019829hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di4_A Zinc protease, cell div 100.0 7.3E-35 2.5E-39 271.2 16.4 152 165-329 7-202 (238)
2 2ce7_A Cell division protein F 100.0 1E-27 3.5E-32 241.9 17.4 191 106-329 225-459 (476)
3 2dhr_A FTSH; AAA+ protein, hex 99.9 1.5E-26 5E-31 234.7 15.6 189 106-329 240-469 (499)
4 3b4r_A Putative zinc metallopr 96.3 0.0033 1.1E-07 57.4 4.5 57 176-257 50-106 (224)
5 2jsd_A Matrix metalloproteinas 68.6 2 6.7E-05 36.1 1.8 15 173-187 107-121 (160)
6 2xs4_A Karilysin protease; hyd 66.7 2.2 7.7E-05 36.2 1.8 15 172-186 113-127 (167)
7 2ovx_A Matrix metalloproteinas 64.3 2.2 7.6E-05 36.2 1.3 14 173-186 110-123 (159)
8 1hy7_A Stromelysin-1, MMP-3; m 63.8 3.1 0.00011 35.7 2.1 15 173-187 112-126 (173)
9 1hv5_A Stromelysin 3; inhibiti 61.2 2.7 9.3E-05 35.7 1.3 15 172-186 111-125 (165)
10 1cge_A Fibroblast collagenase; 60.3 3.2 0.00011 35.4 1.6 14 173-186 110-123 (168)
11 3gpv_A Transcriptional regulat 60.1 25 0.00085 29.3 7.1 68 264-331 57-133 (148)
12 1i76_A MMP-8;, neutrophil coll 57.9 4.1 0.00014 34.6 1.8 14 173-186 111-124 (163)
13 3gp4_A Transcriptional regulat 57.5 49 0.0017 27.4 8.4 66 264-329 43-117 (142)
14 1q08_A Zn(II)-responsive regul 56.8 33 0.0011 26.0 6.8 50 265-314 1-59 (99)
15 1y93_A Macrophage metalloelast 52.0 4.8 0.00016 34.1 1.3 14 173-186 107-120 (159)
16 2y6d_A Matrilysin; hydrolase; 51.8 5.8 0.0002 34.2 1.8 15 172-186 113-127 (174)
17 3cqb_A Probable protease HTPX 51.5 5.3 0.00018 31.7 1.4 21 167-187 76-96 (107)
18 1rm8_A MMP-16, matrix metallop 51.0 6.1 0.00021 33.6 1.8 15 172-186 115-129 (169)
19 3ayu_A 72 kDa type IV collagen 50.6 5.8 0.0002 33.9 1.6 14 173-186 113-126 (167)
20 1slm_A Stromelysin-1; hydrolas 50.3 5.7 0.0002 36.5 1.6 15 173-187 194-208 (255)
21 1ich_A TNF-1, tumor necrosis f 48.4 44 0.0015 27.3 6.5 61 270-331 28-99 (112)
22 1sat_A Serratia protease; para 45.4 9 0.00031 38.2 2.2 16 172-187 168-183 (471)
23 1g9k_A Serralysin; beta jelly 45.3 9.1 0.00031 38.2 2.2 15 173-187 162-176 (463)
24 1kap_P Alkaline protease; calc 44.0 9.7 0.00033 38.1 2.2 15 173-187 178-192 (479)
25 3ezq_A Tumor necrosis factor r 42.5 94 0.0032 25.4 7.6 48 268-315 21-78 (115)
26 1c7k_A NCNP, zinc endoprotease 41.9 10 0.00036 31.8 1.8 13 174-186 77-89 (132)
27 2cki_A Ulilysin; metalloprotea 41.7 8.3 0.00029 35.7 1.2 16 173-188 161-176 (262)
28 1k7i_A PROC, secreted protease 41.7 11 0.00038 37.7 2.2 16 172-187 180-195 (479)
29 2of5_A Death domain-containing 36.9 83 0.0029 25.3 6.4 46 270-316 38-94 (114)
30 3oq9_A Tumor necrosis factor r 36.2 39 0.0013 26.2 4.1 48 268-315 13-70 (86)
31 2o71_A Death domain-containing 35.0 1.1E+02 0.0036 24.7 6.8 58 270-328 38-106 (115)
32 1r8d_A Transcription activator 34.5 57 0.002 25.4 5.0 44 265-308 44-89 (109)
33 830c_A MMP-13, MMP-13; matrix 34.5 13 0.00045 31.9 1.3 15 173-187 112-126 (168)
34 3ma2_D Matrix metalloproteinas 32.4 14 0.00047 32.2 1.1 14 172-185 120-133 (181)
35 1r8e_A Multidrug-efflux transp 32.3 62 0.0021 28.7 5.5 66 264-329 47-115 (278)
36 3ba0_A Macrophage metalloelast 30.3 19 0.00065 34.5 1.8 15 173-187 106-120 (365)
37 1q06_A Transcriptional regulat 27.8 2.4E+02 0.0082 22.7 7.9 21 265-285 42-64 (135)
38 3qao_A LMO0526 protein, MERR-l 25.8 84 0.0029 28.4 5.2 23 264-286 44-68 (249)
39 3edh_A Bone morphogenetic prot 25.3 26 0.00089 30.9 1.6 18 174-191 87-104 (201)
40 1fad_A Protein (FADD protein); 24.9 2.3E+02 0.0077 21.4 8.8 60 270-330 28-97 (99)
41 1l6j_A Matrix metalloproteinas 24.5 22 0.00076 35.3 1.1 14 173-186 375-388 (425)
42 3lqb_A Hatching enzyme, LOC792 24.4 28 0.00095 30.8 1.6 18 174-191 93-110 (199)
43 1eak_A 72 kDa type IV collagen 22.7 25 0.00086 34.9 1.1 15 173-187 365-379 (421)
44 3t15_A Ribulose bisphosphate c 22.3 25 0.00085 32.0 0.9 21 170-190 262-282 (293)
45 3dwc_A TCMCP-1, metallocarboxy 21.7 30 0.001 35.1 1.4 15 177-193 264-278 (505)
46 3lq0_A Proastacin; metallopept 21.6 34 0.0012 31.1 1.6 18 175-192 121-138 (235)
47 2gf5_A FADD protein; death dom 21.4 1.2E+02 0.0041 26.1 5.1 57 270-328 112-179 (191)
48 3hq2_A Bacillus subtilis M32 c 20.7 33 0.0011 34.8 1.4 15 178-194 263-277 (501)
49 3hoa_A Thermostable carboxypep 20.4 33 0.0011 34.8 1.4 15 178-194 274-288 (509)
No 1
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=100.00 E-value=7.3e-35 Score=271.24 Aligned_cols=152 Identities=15% Similarity=0.177 Sum_probs=119.7
Q ss_pred ccCCCCHhHHHHHHHHHHhHHHHHHHhC--CCCceeeecchhhhhhcCccccccceeeecchhhhhhccccCCHHHHHHH
Q 019829 165 IGHTFSQKYHNRVIQHEAGHFLIAYLVG--ILPKGYTLTSFEALKKEGSLNVQAGTAFVDFEFLEEVNSGKVSATTLNRF 242 (335)
Q Consensus 165 ~~~~~s~~~r~RIA~HEAGHaLVAyllg--~PV~~~TI~preal~~~G~~~~~gG~~f~~~~~~~~~~~g~~t~~~L~r~ 242 (335)
.++.+|+++|++||||||||||||++++ +||++|||+|| | ..+|+++..|+. +++.+|+++|.++
T Consensus 7 k~~~~s~~ek~~vAyHEAGHAlva~~l~~~~pV~KVTIiPR------G---~alG~t~~~P~e----d~~~~tk~~l~~~ 73 (238)
T 2di4_A 7 SHMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPR------G---MALGVTQQLPIE----DKHIYDKKDLYNK 73 (238)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC-----------------------------CCCCBHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEeec------C---CcceEEEeCCcc----cccccCHHHHHHH
Confidence 3455799999999999999999999998 79999999998 5 255766655432 4678999999999
Q ss_pred HHHHchhHHHHHHHh--CC-ccchhhHHHHHHHHHHh----cCCCH-----------------------------HHHHH
Q 019829 243 SCIALAGVATEYLLY--GY-AEGGLADINKLDALLKG----LGFTQ-----------------------------KKADS 286 (335)
Q Consensus 243 i~VlLAGrAAE~lvy--G~-atGg~~Dl~qat~i~~~----lG~s~-----------------------------~~id~ 286 (335)
++|+|||||||+|+| |+ ++|++||++++|++++. +|||. ..+|.
T Consensus 74 i~v~LgGRaAEelifG~g~vttGA~~Dl~~AT~iAr~MV~~~GMs~~lG~v~~~~~~~~flg~~~~~~~~Se~ta~~iD~ 153 (238)
T 2di4_A 74 ILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMTTAVDTSPDLLREIDE 153 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC----------CCCSCCHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHhCCCCcccChHhHHHHHHHHHHHHHHHhCCCCCCCceeecCCccccccccccccccCHHHHHHHHH
Confidence 999999999999999 66 57999999999998754 67753 23566
Q ss_pred HHH----HHHHHHHHHHHHcHHHHHHHHHHHHcccch--HHHHHHHHhh
Q 019829 287 QVR----WSLLNTVLLLRRHKGARAKLAVAMTMGKSV--GSCIDIIEDN 329 (335)
Q Consensus 287 evR----~A~~~A~~LL~~~r~aleaLaeaLl~~esl--~~ci~~Ie~~ 329 (335)
++| +||.+|++||++|++.+++||++|+++||| +++.++|+..
T Consensus 154 Ev~~il~~ay~~a~~iL~~nr~~L~~lA~~Lle~EtL~~~ei~~il~~~ 202 (238)
T 2di4_A 154 EVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLY 202 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHccC
Confidence 665 899999999999999999999999999999 8888998763
No 2
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=99.95 E-value=1e-27 Score=241.94 Aligned_cols=191 Identities=19% Similarity=0.205 Sum_probs=135.8
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhcCCChhHHHHHHHHHHHHHHHHHHhhcCCCCccccccccCCCCHhHHHHHHHHHHhHH
Q 019829 106 LGSIERNLQLAAIVGGVSAWNVFGFNPQQILYLSLALLFLWTVDSVSYNGGVGSLVLDTIGHTFSQKYHNRVIQHEAGHF 185 (335)
Q Consensus 106 l~sv~n~~a~~a~~g~~~~~~~~~l~~~~~~~~~~~~l~~~aiD~V~lGg~~~~lvld~~~~~~s~~~r~RIA~HEAGHa 185 (335)
|.++.|++++.|...+...+..-++ ..++|++.+|..... ..++++++++++|||+||+
T Consensus 225 L~~lv~~Aal~A~~~~~~~I~~~dl--------------~~al~~v~~~~~~~~-------~~~~~~e~~~~a~~e~G~a 283 (476)
T 2ce7_A 225 LENLVNEAALLAAREGRDKITMKDF--------------EEAIDRVIAGPARKS-------LLISPAEKRIIAYHEAGHA 283 (476)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHH--------------HHHHHHHC---------------CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCeecHHHH--------------HHHHHHHhcCccccc-------hhhhcchhhhhHHHHhhhH
Confidence 5666677777666554333322222 347899988765332 3468999999999999999
Q ss_pred HHHHHhC--CCCceeeecchhhhhhcCccccccceeeecchhhhhhccccCCHHHHHHHHHHHchhHHHHHHHhCCc-cc
Q 019829 186 LIAYLVG--ILPKGYTLTSFEALKKEGSLNVQAGTAFVDFEFLEEVNSGKVSATTLNRFSCIALAGVATEYLLYGYA-EG 262 (335)
Q Consensus 186 LVAyllg--~PV~~~TI~preal~~~G~~~~~gG~~f~~~~~~~~~~~g~~t~~~L~r~i~VlLAGrAAE~lvyG~a-tG 262 (335)
+++++++ .|++++||.|+ | ...+|+++..|+. +.+.+|+++|.++++|+|||||||+++||++ +|
T Consensus 284 ~~~~~l~~~~~~~~~~i~pr------g--~~alg~~~~~p~~----~~~~~~~~~l~~~i~~~l~Gr~ae~~~~g~~~~g 351 (476)
T 2ce7_A 284 VVSTVVPNGEPVHRISIIPR------G--YKALGYTLHLPEE----DKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSG 351 (476)
T ss_dssp HHHHHSTTCCCCCEEECC-----------------------------CCSCBHHHHHHHHHHHTHHHHHHHHHHSSCCGG
T ss_pred HHhhccCCccccceeeeecC------c--ccccceEEEcCcc----cccccCHHHHHHHHHHHHhHHHHHhhhcCCCCcc
Confidence 9999997 68999999997 4 2355666555432 4578999999999999999999999999995 59
Q ss_pred hhhHHHHHHHHHHh----cCCCH-------------------------------HHHHHHHH----HHHHHHHHHHHHcH
Q 019829 263 GLADINKLDALLKG----LGFTQ-------------------------------KKADSQVR----WSLLNTVLLLRRHK 303 (335)
Q Consensus 263 g~~Dl~qat~i~~~----lG~s~-------------------------------~~id~evR----~A~~~A~~LL~~~r 303 (335)
++||++++|++++. +|||. ..+|++++ .+|.+|++||++|+
T Consensus 352 a~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 431 (476)
T 2ce7_A 352 AANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYR 431 (476)
T ss_dssp GHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC-------------CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCcCCceeecCCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999754 57642 13566665 69999999999999
Q ss_pred HHHHHHHHHHHcccch--HHHHHHHHhh
Q 019829 304 GARAKLAVAMTMGKSV--GSCIDIIEDN 329 (335)
Q Consensus 304 ~aleaLaeaLl~~esl--~~ci~~Ie~~ 329 (335)
+.++++|++|+++||| +++.++++..
T Consensus 432 ~~l~~~a~~l~~~e~l~~~~~~~~~~~~ 459 (476)
T 2ce7_A 432 KQLDNIVEILLEKETIEGDELRRILSEE 459 (476)
T ss_dssp HHHHHHHHHHHHHSEEEHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhCeeCHHHHHHHhccc
Confidence 9999999999999999 7887888763
No 3
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=99.94 E-value=1.5e-26 Score=234.74 Aligned_cols=189 Identities=20% Similarity=0.176 Sum_probs=149.9
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhcCCChhHHHHHHHHHHHHHHHHHHhhcCCCCccccccccCCCCHhHHHHHHHHHHhHH
Q 019829 106 LGSIERNLQLAAIVGGVSAWNVFGFNPQQILYLSLALLFLWTVDSVSYNGGVGSLVLDTIGHTFSQKYHNRVIQHEAGHF 185 (335)
Q Consensus 106 l~sv~n~~a~~a~~g~~~~~~~~~l~~~~~~~~~~~~l~~~aiD~V~lGg~~~~lvld~~~~~~s~~~r~RIA~HEAGHa 185 (335)
|.++-|++++.|.+.+...+..-++. .++|++.+|....+ +.++++++++++|||+||+
T Consensus 240 L~~lv~~Aa~~A~~~~~~~It~~dl~--------------~al~~v~~~~~~~~-------~~~~~~e~~~~a~~e~g~a 298 (499)
T 2dhr_A 240 LENLLNEAALLAAREGRRKITMKDLE--------------EAADRVMMLPAKKS-------LVLSPRDRRITAYHEAGHA 298 (499)
T ss_dssp HHHHHHHHHHHHTTTCCSSCCSHHHH--------------HHHHHHTTCSSSSC-------CCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCccCHHHHH--------------HHHHHHhccccccc-------chhhHHHHhhhHHHHHHHH
Confidence 66777777777766544333322332 37899999865332 3468999999999999999
Q ss_pred HHHHHhC--CCCceeeecchhhhhhcCccccccceeeecchhhhhhccccCCHHHHHHHHHHHchhHHHHHHHhCCc-cc
Q 019829 186 LIAYLVG--ILPKGYTLTSFEALKKEGSLNVQAGTAFVDFEFLEEVNSGKVSATTLNRFSCIALAGVATEYLLYGYA-EG 262 (335)
Q Consensus 186 LVAyllg--~PV~~~TI~preal~~~G~~~~~gG~~f~~~~~~~~~~~g~~t~~~L~r~i~VlLAGrAAE~lvyG~a-tG 262 (335)
+|+|+++ .||+++||.|+ | ...|+++ |. +.+.+.+|+.++..+|+++|||||||+++||++ +|
T Consensus 299 v~~~~l~~~~~v~~~~i~pr------~---~~~g~~~--p~---q~~~~~~t~~~l~~~i~~~lgGr~ae~~~~g~~~~g 364 (499)
T 2dhr_A 299 LAAHFLEHADGVHKVTIVPR------G---RALGFMM--PR---REDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTG 364 (499)
T ss_dssp HHHCCSSSCCCCCCEESCCS------S---CTTCSSH--HH---HTTCCCCCHHHHHHHHHHHHHHHHHHHHHSCSCCBC
T ss_pred HHHhhcCCCCeeeEEEeecC------C---CcCcccc--cc---hhhhhccCHHHHHHHHHHHhhhHhHHHhhhcccCcc
Confidence 9999986 58999999997 4 3456655 32 134578899999999999999999999999995 59
Q ss_pred hhhHHHHHHHHHHh----cCCCH----------------------------HHHHHHHH----HHHHHHHHHHHHcHHHH
Q 019829 263 GLADINKLDALLKG----LGFTQ----------------------------KKADSQVR----WSLLNTVLLLRRHKGAR 306 (335)
Q Consensus 263 g~~Dl~qat~i~~~----lG~s~----------------------------~~id~evR----~A~~~A~~LL~~~r~al 306 (335)
++||++++|++++. +|||. ..+|.+++ ++|.+|++||++|++.+
T Consensus 365 a~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~~s~~~~~~i~~~v~~~~~~~~~~~~~~l~~~~~~l 444 (499)
T 2dhr_A 365 AENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVL 444 (499)
T ss_dssp CCHHHHHHHHHHHHHHTTSCCCSSSCSCCCCCCCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998864 56642 24566665 69999999999999999
Q ss_pred HHHHHHHHcccch--HHHHHHHHhh
Q 019829 307 AKLAVAMTMGKSV--GSCIDIIEDN 329 (335)
Q Consensus 307 eaLaeaLl~~esl--~~ci~~Ie~~ 329 (335)
++||++|+++||| +++.++++..
T Consensus 445 ~~~a~~l~~~e~l~~~~~~~~~~~~ 469 (499)
T 2dhr_A 445 ERVAETLLERETLTAEEFQRVVEGL 469 (499)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHTTC
T ss_pred HHHHHHHHHhCeeCHHHHHHHhccC
Confidence 9999999999999 7888888764
No 4
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=96.26 E-value=0.0033 Score=57.41 Aligned_cols=57 Identities=25% Similarity=0.372 Sum_probs=41.8
Q ss_pred HHHHHHHhHHHHHHHhCCCCceeeecchhhhhhcCccccccceeeecchhhhhhccccCCHHHHHHHHHHHchhHHHHHH
Q 019829 176 RVIQHEAGHFLIAYLVGILPKGYTLTSFEALKKEGSLNVQAGTAFVDFEFLEEVNSGKVSATTLNRFSCIALAGVATEYL 255 (335)
Q Consensus 176 RIA~HEAGHaLVAyllg~PV~~~TI~preal~~~G~~~~~gG~~f~~~~~~~~~~~g~~t~~~L~r~i~VlLAGrAAE~l 255 (335)
-+..||.||+++|+..|+++.++++.|. | |+. ..+ + .++ .+...|.+||-.+.-+
T Consensus 50 ~v~~HElgH~~~A~~~G~~~~~i~l~p~------G------g~~--~~~--~------~~~---~~~~~ValAGPl~nl~ 104 (224)
T 3b4r_A 50 SVVLHELGHSYVAKKYGVKIEKILLLPI------G------GVA--MMD--K------IPK---EGELRIGIAGPLVSFI 104 (224)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCEEECSS------S------CBC--CCC--C------CCS---SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEEe------e------eEE--Ecc--c------CCc---cceeeeeeeHHHHHHH
Confidence 4678999999999999999999999986 4 322 211 1 111 3466799999998865
Q ss_pred Hh
Q 019829 256 LY 257 (335)
Q Consensus 256 vy 257 (335)
.-
T Consensus 105 la 106 (224)
T 3b4r_A 105 IG 106 (224)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 5
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=68.57 E-value=2 Score=36.14 Aligned_cols=15 Identities=40% Similarity=0.288 Sum_probs=12.5
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
+...|+.||-||+|-
T Consensus 107 ~~~~v~~HEiGHaLG 121 (160)
T 2jsd_A 107 NLFTVAAHEFGHALG 121 (160)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhHhhhc
Confidence 467899999999963
No 6
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=66.66 E-value=2.2 Score=36.21 Aligned_cols=15 Identities=40% Similarity=0.445 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHhHHH
Q 019829 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+...|+.||-||+|
T Consensus 113 ~~~~~v~~HEiGHaL 127 (167)
T 2xs4_A 113 IDLITVAAHEIGHLL 127 (167)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhh
Confidence 356789999999986
No 7
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=64.28 E-value=2.2 Score=36.20 Aligned_cols=14 Identities=36% Similarity=0.311 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHH
Q 019829 173 YHNRVIQHEAGHFL 186 (335)
Q Consensus 173 ~r~RIA~HEAGHaL 186 (335)
+...|+.||-||+|
T Consensus 110 ~~~~va~HEiGHaL 123 (159)
T 2ovx_A 110 SLFLVAAHQFGHAL 123 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhh
Confidence 46689999999986
No 8
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=63.75 E-value=3.1 Score=35.67 Aligned_cols=15 Identities=40% Similarity=0.266 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
....|+.||-||+|-
T Consensus 112 ~~~~v~~HEiGHaLG 126 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLG 126 (173)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHhhc
Confidence 456899999999873
No 9
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=61.22 E-value=2.7 Score=35.75 Aligned_cols=15 Identities=40% Similarity=0.452 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHhHHH
Q 019829 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+...|+.||-||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVL 125 (165)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhHHHHhHhhh
Confidence 456789999999986
No 10
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=60.31 E-value=3.2 Score=35.43 Aligned_cols=14 Identities=50% Similarity=0.648 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhHHH
Q 019829 173 YHNRVIQHEAGHFL 186 (335)
Q Consensus 173 ~r~RIA~HEAGHaL 186 (335)
....|+.||-||+|
T Consensus 110 ~~~~v~~HEiGHaL 123 (168)
T 1cge_A 110 NLHRVAAHELGHSL 123 (168)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred chhhhhhhHhHhhh
Confidence 45689999999986
No 11
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=60.06 E-value=25 Score=29.34 Aligned_cols=68 Identities=21% Similarity=0.378 Sum_probs=44.6
Q ss_pred hhHHHHHHHH--HHhcCCCHHHHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHcc-cchHHHHHHHHhhhc
Q 019829 264 LADINKLDAL--LKGLGFTQKKADSQVRW------SLLNTVLLLRRHKGARAKLAVAMTMG-KSVGSCIDIIEDNID 331 (335)
Q Consensus 264 ~~Dl~qat~i--~~~lG~s~~~id~evR~------A~~~A~~LL~~~r~aleaLaeaLl~~-esl~~ci~~Ie~~~~ 331 (335)
.+|+.++..| ++.+|||.+.|..-+.. ...+...+|++++..+++-.+.|.+. +.|...+...++.+.
T Consensus 57 ~~dl~~l~~I~~lr~~G~sL~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~ 133 (148)
T 3gpv_A 57 EEALKYLEMILCLKNTGMPIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEIS 133 (148)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688887766 46789998877765442 24566778888888887777777664 556777776666553
No 12
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=57.94 E-value=4.1 Score=34.64 Aligned_cols=14 Identities=43% Similarity=0.356 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHH
Q 019829 173 YHNRVIQHEAGHFL 186 (335)
Q Consensus 173 ~r~RIA~HEAGHaL 186 (335)
+...|+.||-||+|
T Consensus 111 ~~~~v~~HE~GHal 124 (163)
T 1i76_A 111 NLFLVAAHEFGHSL 124 (163)
T ss_dssp BHHHHHHHHHHHHH
T ss_pred hhhhhhHHHhhhhh
Confidence 45689999999986
No 13
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=57.54 E-value=49 Score=27.39 Aligned_cols=66 Identities=12% Similarity=0.094 Sum_probs=37.6
Q ss_pred hhHHHHHHHH--HHhcCCCHHHHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHcc-cchHHHHHHHHhh
Q 019829 264 LADINKLDAL--LKGLGFTQKKADSQVRW------SLLNTVLLLRRHKGARAKLAVAMTMG-KSVGSCIDIIEDN 329 (335)
Q Consensus 264 ~~Dl~qat~i--~~~lG~s~~~id~evR~------A~~~A~~LL~~~r~aleaLaeaLl~~-esl~~ci~~Ie~~ 329 (335)
..|+..+..| ++.+|||.+.|..-+.. ...+...+|+++...+++-.+.|.+- +.|...++..++.
T Consensus 43 ~~dl~~l~~I~~lr~~G~sL~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~ 117 (142)
T 3gp4_A 43 AEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTH 117 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666655 45678887766554332 23445667777777666666655553 3445555444443
No 14
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=56.80 E-value=33 Score=25.96 Aligned_cols=50 Identities=10% Similarity=0.201 Sum_probs=31.3
Q ss_pred hHHHHHHHH--HHhcCCCHHHHHHHHHH-------HHHHHHHHHHHcHHHHHHHHHHHH
Q 019829 265 ADINKLDAL--LKGLGFTQKKADSQVRW-------SLLNTVLLLRRHKGARAKLAVAMT 314 (335)
Q Consensus 265 ~Dl~qat~i--~~~lG~s~~~id~evR~-------A~~~A~~LL~~~r~aleaLaeaLl 314 (335)
+|+.++..| ++.+|||-++|..-+.. .......+|++|+..++.=.+.|.
T Consensus 1 ~dl~rL~~I~~lr~lGfsL~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~ 59 (99)
T 1q08_A 1 SDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQ 59 (99)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367777776 57799998877764432 123456667776666655544443
No 15
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=51.99 E-value=4.8 Score=34.13 Aligned_cols=14 Identities=36% Similarity=0.280 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHH
Q 019829 173 YHNRVIQHEAGHFL 186 (335)
Q Consensus 173 ~r~RIA~HEAGHaL 186 (335)
+...|+.||-||+|
T Consensus 107 ~~~~~~~HE~GH~l 120 (159)
T 1y93_A 107 NLFLTAVHEIGHSL 120 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhh
Confidence 46789999999985
No 16
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=51.78 E-value=5.8 Score=34.16 Aligned_cols=15 Identities=33% Similarity=0.293 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHhHHH
Q 019829 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+...|+.||-||+|
T Consensus 113 ~~~~~~~~HE~gH~l 127 (174)
T 2y6d_A 113 INFLYAATHELGHSL 127 (174)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeehhhHHhHhhh
Confidence 356789999999986
No 17
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.55 E-value=5.3 Score=31.71 Aligned_cols=21 Identities=24% Similarity=0.438 Sum_probs=17.6
Q ss_pred CCCCHhHHHHHHHHHHhHHHH
Q 019829 167 HTFSQKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 167 ~~~s~~~r~RIA~HEAGHaLV 187 (335)
..++++|..=|.-||.||..-
T Consensus 76 ~~l~~~El~aVlaHElgH~~~ 96 (107)
T 3cqb_A 76 HNMTRDEAEAVLAHEVSHIAN 96 (107)
T ss_dssp HHSCHHHHHHHHHHHHHHHHT
T ss_pred hhCCHHHHHHHHHHHHHHHHC
Confidence 345899999999999999753
No 18
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=50.99 E-value=6.1 Score=33.59 Aligned_cols=15 Identities=40% Similarity=0.326 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHhHHH
Q 019829 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+...|+.||-||+|
T Consensus 115 ~~~~~~~~he~gh~l 129 (169)
T 1rm8_A 115 NDLFLVAVHELGHAL 129 (169)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeeehhhhhhhhc
Confidence 466789999999986
No 19
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=50.56 E-value=5.8 Score=33.92 Aligned_cols=14 Identities=29% Similarity=0.242 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhHHH
Q 019829 173 YHNRVIQHEAGHFL 186 (335)
Q Consensus 173 ~r~RIA~HEAGHaL 186 (335)
....|+.||-||+|
T Consensus 113 ~~~~~~~HE~gH~l 126 (167)
T 3ayu_A 113 SLFLVAAHAFGHAM 126 (167)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cceeehhhhhHHhc
Confidence 35689999999986
No 20
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=50.31 E-value=5.7 Score=36.52 Aligned_cols=15 Identities=40% Similarity=0.266 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
....|+.||-||+|-
T Consensus 194 ~l~~va~HEiGHaLG 208 (255)
T 1slm_A 194 NLFLVAAHEIGHSLG 208 (255)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred eehhhhHHHHHHHhc
Confidence 457899999999874
No 21
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=48.38 E-value=44 Score=27.26 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=43.5
Q ss_pred HHHHHHhcCCCHHHHHHHH----HHHHHHHHHHHHHcH-------HHHHHHHHHHHcccchHHHHHHHHhhhc
Q 019829 270 LDALLKGLGFTQKKADSQV----RWSLLNTVLLLRRHK-------GARAKLAVAMTMGKSVGSCIDIIEDNID 331 (335)
Q Consensus 270 at~i~~~lG~s~~~id~ev----R~A~~~A~~LL~~~r-------~aleaLaeaLl~~esl~~ci~~Ie~~~~ 331 (335)
..++++.+|+|+.+||.-. |-..++.+++|+.-+ ..++.|.++|. +--+..|.+.|++.+.
T Consensus 28 WK~~aRkLGLse~~Id~Ie~~~~r~l~Eq~yqmLr~W~~~~G~~~Atv~~L~~aLr-~~~l~~~ae~Ie~~l~ 99 (112)
T 1ich_A 28 WKEFVKRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLR-DMDLLGCLEDIEEALC 99 (112)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHCCSCHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHH-HTTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHHHHHHHHCcCChHHHHHHHHHHHHHhcCCCCCcHHHHHHHHH-HhccHHHHHHHHHHHh
Confidence 5566788999999888522 125677888876432 25899999998 4567778888888774
No 22
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=45.37 E-value=9 Score=38.23 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHhHHHH
Q 019829 172 KYHNRVIQHEAGHFLI 187 (335)
Q Consensus 172 ~~r~RIA~HEAGHaLV 187 (335)
.+...|+.||-||+|=
T Consensus 168 ~~~~~va~HEiGHaLG 183 (471)
T 1sat_A 168 DYGRQTFTHEIGHALG 183 (471)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccceeeeeecccccc
Confidence 3446899999999973
No 23
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=45.26 E-value=9.1 Score=38.19 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
+...|+.||-||+|-
T Consensus 162 ~~~~va~HEiGHaLG 176 (463)
T 1g9k_A 162 YGRQTLTHEIGHTLG 176 (463)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhhc
Confidence 557899999999974
No 24
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=44.00 E-value=9.7 Score=38.14 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
+...|+.||-||+|-
T Consensus 178 ~~~~va~HEIGHaLG 192 (479)
T 1kap_P 178 YGRQTLTHEIGHTLG 192 (479)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred ccceeehhhhhhhhc
Confidence 557899999999874
No 25
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=42.52 E-value=94 Score=25.38 Aligned_cols=48 Identities=19% Similarity=0.211 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCCCHHHHHHHHH----HHHHHHHHHHHHcH------HHHHHHHHHHHc
Q 019829 268 NKLDALLKGLGFTQKKADSQVR----WSLLNTVLLLRRHK------GARAKLAVAMTM 315 (335)
Q Consensus 268 ~qat~i~~~lG~s~~~id~evR----~A~~~A~~LL~~~r------~aleaLaeaLl~ 315 (335)
.+..++++.+|+|..+||.-.. -..++.+++|+... .+++.|.++|..
T Consensus 21 ~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlLr~W~~~~G~~aa~~~Li~aLr~ 78 (115)
T 3ezq_A 21 SQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKK 78 (115)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 3567788999999998885221 25688888887654 588888888876
No 26
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=41.94 E-value=10 Score=31.83 Aligned_cols=13 Identities=54% Similarity=0.884 Sum_probs=11.3
Q ss_pred HHHHHHHHHhHHH
Q 019829 174 HNRVIQHEAGHFL 186 (335)
Q Consensus 174 r~RIA~HEAGHaL 186 (335)
.-+|+.||-||.|
T Consensus 77 ~~~v~aHE~GH~L 89 (132)
T 1c7k_A 77 STRVTAHETGHVL 89 (132)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CceEEeeeehhcc
Confidence 4589999999986
No 27
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=41.70 E-value=8.3 Score=35.69 Aligned_cols=16 Identities=38% Similarity=0.565 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhHHHHH
Q 019829 173 YHNRVIQHEAGHFLIA 188 (335)
Q Consensus 173 ~r~RIA~HEAGHaLVA 188 (335)
..-+++.||.||+|-=
T Consensus 161 n~g~TltHEvGH~LGL 176 (262)
T 2cki_A 161 DKGRTATHEIGHWLNL 176 (262)
T ss_dssp CSSHHHHHHHHHHTTC
T ss_pred cccchhhhhhhhhhcc
Confidence 3458999999998743
No 28
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=41.66 E-value=11 Score=37.68 Aligned_cols=16 Identities=38% Similarity=0.605 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHhHHHH
Q 019829 172 KYHNRVIQHEAGHFLI 187 (335)
Q Consensus 172 ~~r~RIA~HEAGHaLV 187 (335)
.+...|+.||-||+|-
T Consensus 180 ~~~~~va~HEiGHaLG 195 (479)
T 1k7i_A 180 EYGRQTFTHEIGHALG 195 (479)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccccccHHHHHHhhc
Confidence 3446899999999973
No 29
>2of5_A Death domain-containing protein cradd; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=36.86 E-value=83 Score=25.29 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=32.4
Q ss_pred HHHHHHhcCCCHHHHHHHHHH-----HHHHHHHHHHHcH------HHHHHHHHHHHcc
Q 019829 270 LDALLKGLGFTQKKADSQVRW-----SLLNTVLLLRRHK------GARAKLAVAMTMG 316 (335)
Q Consensus 270 at~i~~~lG~s~~~id~evR~-----A~~~A~~LL~~~r------~aleaLaeaLl~~ 316 (335)
-..+++.|||+...|+. ++. ..+++.++|+.-+ ..++.|.++|.+-
T Consensus 38 Wk~LAR~LGlse~dId~-I~~~~p~~l~eq~~qmL~~W~~r~G~~AT~~~L~~AL~~~ 94 (114)
T 2of5_A 38 WEPMVLSLGLSQTDIYR-CKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGLRAV 94 (114)
T ss_dssp HHHHHHTTTCCHHHHHH-HHHHCSSCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHCcCcHHHHHHHHHHHc
Confidence 56678889999998885 332 3467788776543 4567888888774
No 30
>3oq9_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS; 6.80A {Mus musculus}
Probab=36.17 E-value=39 Score=26.19 Aligned_cols=48 Identities=15% Similarity=0.074 Sum_probs=34.5
Q ss_pred HHHHHHHHhcCCCHHHHHHHHH----HHHHHHHHHHHHcH------HHHHHHHHHHHc
Q 019829 268 NKLDALLKGLGFTQKKADSQVR----WSLLNTVLLLRRHK------GARAKLAVAMTM 315 (335)
Q Consensus 268 ~qat~i~~~lG~s~~~id~evR----~A~~~A~~LL~~~r------~aleaLaeaLl~ 315 (335)
.+..++++.+|+|+.+||.-.. -..++.+++|+..+ .+++.|.++|..
T Consensus 13 ~~wK~~~R~LGlse~~Id~I~~~~~~d~~Eq~~qmL~~W~~~~g~~a~~~~Li~~Lr~ 70 (86)
T 3oq9_A 13 QEAKKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKSDAYQDLIKGLKK 70 (86)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHTCTTCCTTHHHHHHHHHHHHSCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHHHHHHHhCCCChHHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 3567788999999998885221 24577888887655 567888888765
No 31
>2o71_A Death domain-containing protein cradd; raidd, apoptosis; 2.00A {Homo sapiens}
Probab=35.04 E-value=1.1e+02 Score=24.71 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=37.5
Q ss_pred HHHHHHhcCCCHHHHHHHHHH-----HHHHHHHHHHHcH------HHHHHHHHHHHcccchHHHHHHHHh
Q 019829 270 LDALLKGLGFTQKKADSQVRW-----SLLNTVLLLRRHK------GARAKLAVAMTMGKSVGSCIDIIED 328 (335)
Q Consensus 270 at~i~~~lG~s~~~id~evR~-----A~~~A~~LL~~~r------~aleaLaeaLl~~esl~~ci~~Ie~ 328 (335)
-..+++.|||+...|+. ++. -.+++.++|+.-+ ..++.|.++|.+-.-=..+++-|.+
T Consensus 38 Wk~LAR~LGlse~dId~-I~~~~p~dl~eq~~qmL~~W~~r~G~~AT~~~L~~AL~~~~l~~~v~~~~~~ 106 (115)
T 2o71_A 38 WEPMVLSLGLSQTDIYR-CKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGLRAVEVDPSLLLHMLE 106 (115)
T ss_dssp HHHHHHHTTCCHHHHHH-HHHHCTTCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHTTCCTHHHHHHTC
T ss_pred HHHHHHHcCCCHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHCcCcHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 56678889999998885 332 3467888876543 4567888888775433444444433
No 32
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=34.55 E-value=57 Score=25.36 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=21.5
Q ss_pred hHHHHHHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHHcHHHHHH
Q 019829 265 ADINKLDAL--LKGLGFTQKKADSQVRWSLLNTVLLLRRHKGARAK 308 (335)
Q Consensus 265 ~Dl~qat~i--~~~lG~s~~~id~evR~A~~~A~~LL~~~r~alea 308 (335)
+|+..+..+ ++.+|||.+.|..-+...-.....+|+++...++.
T Consensus 44 ~dl~~l~~I~~l~~~G~~l~~I~~~l~~~~~~~~~~l~~~~~~l~~ 89 (109)
T 1r8d_A 44 ADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMK 89 (109)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 455555544 35677777665543321111234455555555444
No 33
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=34.52 E-value=13 Score=31.94 Aligned_cols=15 Identities=40% Similarity=0.233 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
+...|+.||-||+|-
T Consensus 112 ~l~~v~~hE~Gh~lG 126 (168)
T 830c_A 112 NLFLVAAHEFGHSLG 126 (168)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred chhhhhhhhhcchhc
Confidence 457899999999864
No 34
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=32.43 E-value=14 Score=32.25 Aligned_cols=14 Identities=36% Similarity=0.247 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHhHH
Q 019829 172 KYHNRVIQHEAGHF 185 (335)
Q Consensus 172 ~~r~RIA~HEAGHa 185 (335)
.+..-|+.||-||+
T Consensus 120 ~~l~~v~~hE~Gh~ 133 (181)
T 3ma2_D 120 NDIFLVAVHELGHA 133 (181)
T ss_dssp EEHHHHHHHHHHHH
T ss_pred ceeeeeehhhcccc
Confidence 45667999999998
No 35
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=32.28 E-value=62 Score=28.67 Aligned_cols=66 Identities=8% Similarity=0.067 Sum_probs=40.2
Q ss_pred hhHHHHHHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcc-cchHHHHHHHHhh
Q 019829 264 LADINKLDAL--LKGLGFTQKKADSQVRWSLLNTVLLLRRHKGARAKLAVAMTMG-KSVGSCIDIIEDN 329 (335)
Q Consensus 264 ~~Dl~qat~i--~~~lG~s~~~id~evR~A~~~A~~LL~~~r~aleaLaeaLl~~-esl~~ci~~Ie~~ 329 (335)
.+|+.++..+ ++.+|||.++|..-+.........+|++++..+++=.+.|.+. +.|+..++.+++.
T Consensus 47 ~~~~~~l~~i~~l~~~g~~l~~i~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~~~~~ 115 (278)
T 1r8e_A 47 DSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQ 115 (278)
T ss_dssp TGGGGHHHHHHHHHHTTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677777766 4678999877665433113455677777777776666655553 4455555555543
No 36
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=30.30 E-value=19 Score=34.51 Aligned_cols=15 Identities=33% Similarity=0.162 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
+...|+.||-||+|-
T Consensus 106 ~~~~~~~HE~gH~lG 120 (365)
T 3ba0_A 106 NLFLTAVHEIGHSLG 120 (365)
T ss_dssp ESSHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhhc
Confidence 345799999999984
No 37
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=27.77 E-value=2.4e+02 Score=22.72 Aligned_cols=21 Identities=24% Similarity=0.528 Sum_probs=9.4
Q ss_pred hHHHHHHHH--HHhcCCCHHHHH
Q 019829 265 ADINKLDAL--LKGLGFTQKKAD 285 (335)
Q Consensus 265 ~Dl~qat~i--~~~lG~s~~~id 285 (335)
+|+..+..+ ++.+|||.++|.
T Consensus 42 ~dl~~l~~I~~lr~~G~sl~eI~ 64 (135)
T 1q06_A 42 QHLNELTLLRQARQVGFNLEESG 64 (135)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHH
Confidence 344444433 244566554444
No 38
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=25.76 E-value=84 Score=28.41 Aligned_cols=23 Identities=35% Similarity=0.554 Sum_probs=13.3
Q ss_pred hhHHHHHHHH--HHhcCCCHHHHHH
Q 019829 264 LADINKLDAL--LKGLGFTQKKADS 286 (335)
Q Consensus 264 ~~Dl~qat~i--~~~lG~s~~~id~ 286 (335)
.+|+..+..| ++.+|||.+.|..
T Consensus 44 ~~dl~~L~~I~~lr~~G~sL~eIk~ 68 (249)
T 3qao_A 44 EKDVDKLQQILFFKELDFPLKKIQQ 68 (249)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 3456665555 3557777665544
No 39
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=25.34 E-value=26 Score=30.93 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=14.1
Q ss_pred HHHHHHHHHhHHHHHHHh
Q 019829 174 HNRVIQHEAGHFLIAYLV 191 (335)
Q Consensus 174 r~RIA~HEAGHaLVAyll 191 (335)
...++.||-||||--+-.
T Consensus 87 ~~g~i~HEl~HalGf~HE 104 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHE 104 (201)
T ss_dssp SHHHHHHHHHHHHTBCCG
T ss_pred ccchhHHHHHHHhcchhh
Confidence 457999999999865553
No 40
>1fad_A Protein (FADD protein); apoptosis, death domain; NMR {Mus musculus} SCOP: a.77.1.2
Probab=24.86 E-value=2.3e+02 Score=21.44 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=38.9
Q ss_pred HHHHHHhcCCCHHHHHH-HHH---HHHHHHHHHHHHcH------HHHHHHHHHHHcccchHHHHHHHHhhh
Q 019829 270 LDALLKGLGFTQKKADS-QVR---WSLLNTVLLLRRHK------GARAKLAVAMTMGKSVGSCIDIIEDNI 330 (335)
Q Consensus 270 at~i~~~lG~s~~~id~-evR---~A~~~A~~LL~~~r------~aleaLaeaLl~~esl~~ci~~Ie~~~ 330 (335)
-.++++.|||+...|+. +.+ --.+++.++|+.-+ ..++.|.++|.+-. ..++.+.|++.+
T Consensus 28 Wk~Lar~Lg~~~~~I~~I~~~~~~d~~eq~~~mL~~W~~~~g~~At~~~L~~AL~~~~-~~~iae~i~~~~ 97 (99)
T 1fad_A 28 WKRLARELKVSEAKMDGIEEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTCR-LNLVADLVEEAQ 97 (99)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHHT-CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHCC-cHHHHHHHHHHH
Confidence 45667789999988875 112 13577888886543 45788888887643 455555555544
No 41
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=24.49 E-value=22 Score=35.28 Aligned_cols=14 Identities=43% Similarity=0.356 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhHHH
Q 019829 173 YHNRVIQHEAGHFL 186 (335)
Q Consensus 173 ~r~RIA~HEAGHaL 186 (335)
...-||.||-||+|
T Consensus 375 ~l~~Va~HE~GHaL 388 (425)
T 1l6j_A 375 SLFLVAAHEFGHAL 388 (425)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhc
Confidence 45679999999986
No 42
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=24.36 E-value=28 Score=30.84 Aligned_cols=18 Identities=33% Similarity=0.305 Sum_probs=14.0
Q ss_pred HHHHHHHHHhHHHHHHHh
Q 019829 174 HNRVIQHEAGHFLIAYLV 191 (335)
Q Consensus 174 r~RIA~HEAGHaLVAyll 191 (335)
...++.||-||||--+--
T Consensus 93 ~~g~i~HEl~HaLGf~HE 110 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYHE 110 (199)
T ss_dssp SHHHHHHHHHHHHTCCCG
T ss_pred ccchHHHHHHHHhcccee
Confidence 357999999999865543
No 43
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=22.75 E-value=25 Score=34.86 Aligned_cols=15 Identities=27% Similarity=0.164 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHHHH
Q 019829 173 YHNRVIQHEAGHFLI 187 (335)
Q Consensus 173 ~r~RIA~HEAGHaLV 187 (335)
...-||.||-||+|-
T Consensus 365 ~l~~va~HE~GHaLG 379 (421)
T 1eak_A 365 SLFLVAAHQFGHAMG 379 (421)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhccC
Confidence 456799999999874
No 44
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=22.33 E-value=25 Score=31.98 Aligned_cols=21 Identities=19% Similarity=0.048 Sum_probs=17.6
Q ss_pred CHhHHHHHHHHHHhHHHHHHH
Q 019829 170 SQKYHNRVIQHEAGHFLIAYL 190 (335)
Q Consensus 170 s~~~r~RIA~HEAGHaLVAyl 190 (335)
.+.+....++||+||+++..-
T Consensus 262 ~~~~~~~~~l~~~g~~~~~eq 282 (293)
T 3t15_A 262 EQPKMTIEKLLEYGNMLVQEQ 282 (293)
T ss_dssp CCCCCCHHHHHHHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHHH
Confidence 466777889999999999865
No 45
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=21.69 E-value=30 Score=35.10 Aligned_cols=15 Identities=33% Similarity=0.426 Sum_probs=11.7
Q ss_pred HHHHHHhHHHHHHHhCC
Q 019829 177 VIQHEAGHFLIAYLVGI 193 (335)
Q Consensus 177 IA~HEAGHaLVAyllg~ 193 (335)
-.+||+|||+ |-.|+
T Consensus 264 s~iHE~GHAl--YEqgl 278 (505)
T 3dwc_A 264 GVIHETGHAK--YEQNC 278 (505)
T ss_dssp HHHHHHHHHH--HHHTC
T ss_pred HHHHHHhHHH--HHcCC
Confidence 3689999998 55665
No 46
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=21.56 E-value=34 Score=31.08 Aligned_cols=18 Identities=22% Similarity=0.117 Sum_probs=14.7
Q ss_pred HHHHHHHHhHHHHHHHhC
Q 019829 175 NRVIQHEAGHFLIAYLVG 192 (335)
Q Consensus 175 ~RIA~HEAGHaLVAyllg 192 (335)
..++.||-||||--+---
T Consensus 121 ~g~i~HEl~HaLGf~HEh 138 (235)
T 3lq0_A 121 HGTILHALMHAIGFYHEH 138 (235)
T ss_dssp HHHHHHHHHHHHHBCCGG
T ss_pred cchHHHHHHHHhccceee
Confidence 489999999999766643
No 47
>2gf5_A FADD protein; death domain, death effector domain, apoptosis, death- inducing signaling complex; NMR {Homo sapiens} SCOP: a.77.1.2 a.77.1.4
Probab=21.44 E-value=1.2e+02 Score=26.12 Aligned_cols=57 Identities=21% Similarity=0.189 Sum_probs=37.8
Q ss_pred HHHHHHhcCCCHHHHHHHHHH-----HHHHHHHHHHHcH------HHHHHHHHHHHcccchHHHHHHHHh
Q 019829 270 LDALLKGLGFTQKKADSQVRW-----SLLNTVLLLRRHK------GARAKLAVAMTMGKSVGSCIDIIED 328 (335)
Q Consensus 270 at~i~~~lG~s~~~id~evR~-----A~~~A~~LL~~~r------~aleaLaeaLl~~esl~~ci~~Ie~ 328 (335)
...+++.+||+...|+. ++. -..+++++|+..+ ..++.|.+||..-. ..+..+.|+.
T Consensus 112 Wk~Lar~Lgl~~~~I~~-I~~~~~~d~~eq~~~mL~~W~~r~g~~At~~~L~~AL~~~~-~~diae~l~~ 179 (191)
T 2gf5_A 112 WRRLARQLKVSDTKIDS-IEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQ-MNLVADLVQE 179 (191)
T ss_dssp HHHHHHHTTCCHHHHHH-HHHHSSSCSHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHT-CHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHH-HHHhCCCCHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHcC-cHHHHHHHHH
Confidence 55677889999988875 332 3578888887654 34789999998754 3333333443
No 48
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=20.72 E-value=33 Score=34.83 Aligned_cols=15 Identities=40% Similarity=0.547 Sum_probs=11.2
Q ss_pred HHHHHhHHHHHHHhCCC
Q 019829 178 IQHEAGHFLIAYLVGIL 194 (335)
Q Consensus 178 A~HEAGHaLVAyllg~P 194 (335)
.+||+|||+ |-.|+|
T Consensus 263 ~iHE~GHAl--YEqgl~ 277 (501)
T 3hq2_A 263 TIHECGHAI--YEQNID 277 (501)
T ss_dssp HHHHHHHHH--HHTTSC
T ss_pred HHHHHhHHH--HHcCCC
Confidence 789999987 555544
No 49
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} SCOP: d.92.1.0 PDB: 1wgz_A
Probab=20.44 E-value=33 Score=34.82 Aligned_cols=15 Identities=47% Similarity=0.702 Sum_probs=11.1
Q ss_pred HHHHHhHHHHHHHhCCC
Q 019829 178 IQHEAGHFLIAYLVGIL 194 (335)
Q Consensus 178 A~HEAGHaLVAyllg~P 194 (335)
.+||.||++ |-.|+|
T Consensus 274 ~iHE~GHAl--YEqgl~ 288 (509)
T 3hoa_A 274 TLHEMGHAL--YEQGLP 288 (509)
T ss_dssp HHHHHHHHH--HHHHSC
T ss_pred HHHHhhHHH--HHcCCC
Confidence 579999998 445544
Done!