Query 019830
Match_columns 335
No_of_seqs 226 out of 1243
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 07:44:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019830.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019830hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2noca1 d.230.6.1 (A:1-91) Put 53.1 6.8 0.0005 29.2 4.1 37 246-282 54-91 (91)
2 d1pyya2 d.11.1.1 (A:693-750) P 45.1 11 0.00079 25.1 3.8 43 245-297 11-53 (58)
3 d1pzxa_ c.119.1.1 (A:) Hypothe 44.4 5.1 0.00037 34.9 2.5 54 246-299 68-125 (287)
4 d1byra_ d.136.1.1 (A:) Nucleas 43.7 9.7 0.00071 28.8 3.9 53 244-296 39-104 (152)
5 d1r57a_ d.108.1.1 (A:) Hypothe 37.7 11 0.00078 27.7 3.1 25 240-264 50-75 (102)
6 d1vkya_ e.53.1.1 (A:) Queuosin 37.5 7 0.00051 35.2 2.3 57 235-293 216-283 (332)
7 d1vpua_ g.34.1.1 (A:) HIV-1 VP 34.8 4.2 0.0003 26.7 0.2 17 241-257 2-18 (45)
8 d1yx0a1 d.108.1.1 (A:1-151) Hy 34.4 8.4 0.00061 30.2 2.1 35 236-270 81-118 (151)
9 d1wiha_ d.67.3.1 (A:) Ribosome 32.3 6.3 0.00046 28.8 0.8 19 236-254 40-58 (84)
10 d1z4ea1 d.108.1.1 (A:4-153) Tr 31.3 17 0.0013 26.6 3.4 35 236-270 93-128 (150)
11 d1wina_ d.43.2.1 (A:) Flotilli 31.1 15 0.0011 28.2 3.0 39 228-267 82-121 (143)
12 d1x94a_ c.80.1.3 (A:) Phosphoh 30.7 16 0.0012 29.6 3.3 41 242-291 123-163 (191)
13 d1sh8a_ d.38.1.5 (A:) Hypothet 29.1 18 0.0013 27.7 3.3 30 235-264 2-31 (153)
14 d1t57a_ c.49.1.2 (A:) Hypothet 26.2 29 0.0021 28.8 4.1 36 231-266 5-40 (186)
15 d1pyya1 d.11.1.1 (A:632-692) P 25.0 42 0.0031 22.3 4.2 46 242-297 11-56 (61)
16 d1snoa_ b.40.1.1 (A:) Staphylo 25.0 10 0.00075 28.5 0.9 17 282-298 4-20 (136)
17 d2i5ua1 a.275.1.1 (A:2-75) Unc 24.5 15 0.0011 26.0 1.8 29 231-259 10-55 (74)
18 d1qipa_ d.32.1.1 (A:) Glyoxala 24.3 63 0.0046 24.2 5.8 47 246-298 127-174 (176)
19 d1xmta_ d.108.1.1 (A:) Hypothe 24.0 28 0.002 25.3 3.3 23 242-264 50-72 (95)
20 d1vp8a_ c.49.1.2 (A:) Hypothet 23.5 35 0.0025 28.3 4.1 35 231-265 6-40 (190)
21 d1m3sa_ c.80.1.3 (A:) Hypothet 22.3 25 0.0018 27.8 3.0 36 242-278 91-126 (186)
22 d1jeoa_ c.80.1.3 (A:) Probable 22.0 22 0.0016 28.1 2.5 28 238-265 87-114 (177)
23 d1tk9a_ c.80.1.3 (A:) Phosphoh 21.5 35 0.0025 27.6 3.7 24 243-266 123-146 (188)
24 d2euia1 d.108.1.1 (A:1-153) Pr 21.0 29 0.0021 25.4 2.9 36 236-271 89-125 (153)
25 d1vkca_ d.108.1.1 (A:) Putativ 20.4 26 0.0019 26.0 2.5 36 236-271 93-129 (149)
No 1
>d2noca1 d.230.6.1 (A:1-91) Putative periplasmic protein YahO {Salmonella choleraesuis [TaxId: 28901]}
Probab=53.12 E-value=6.8 Score=29.18 Aligned_cols=37 Identities=24% Similarity=0.415 Sum_probs=26.1
Q ss_pred HHHHHH-HHHHcCCeEEEeeccccccccccccceeeee
Q 019830 246 IEEAIL-EAEEKGARVISLGLLNQGEELNRYGGLFVHK 282 (335)
Q Consensus 246 ie~ail-~a~~~g~kv~slg~lN~~~~ln~~g~l~v~~ 282 (335)
+|++|. .||+.|++..-.=..+.+..+.+.-++|-+|
T Consensus 54 ~~~~Ls~KAd~~GA~~y~Iis~~~~~~~~~tA~iYkk~ 91 (91)
T d2noca1 54 AREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKK 91 (91)
T ss_dssp HHHHHHHHHHHTCCSEEECCSCCSSSSCCCEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCCcEEEEEEEeecC
Confidence 455555 8999999977665555555677777777665
No 2
>d1pyya2 d.11.1.1 (A:693-750) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=45.10 E-value=11 Score=25.11 Aligned_cols=43 Identities=12% Similarity=-0.013 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHcCCeEEEeeccccccccccccceeeeecCCCceEeecCCcee
Q 019830 245 LIEEAILEAEEKGARVISLGLLNQGEELNRYGGLFVHKNPELKIKVVDGSSLA 297 (335)
Q Consensus 245 ~ie~ail~a~~~g~kv~slg~lN~~~~ln~~g~l~v~~~p~l~vrvv~g~~l~ 297 (335)
-.++|+..+++.|.+|-- .|.|.-.+++.|.-..+|-.|++.+
T Consensus 11 s~~~A~~~l~~~gl~v~~----------~g~g~~V~~Qsp~~Gt~v~~g~~I~ 53 (58)
T d1pyya2 11 TKETAETLAKWLNIELEF----------QGSGSTVQKQDVRANTAIKDIKKIT 53 (58)
T ss_dssp BHHHHHHHHHHTTCEEEE----------ESCCSEEEEESSCTTCBGGGCSEEE
T ss_pred cHHHHHHHHHHcCCEEEE----------ecCceEEEEECCCCCcccCCCCEEE
Confidence 468999999999999854 3455555688898888888888765
No 3
>d1pzxa_ c.119.1.1 (A:) Hypothetical protein apc36103 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=44.41 E-value=5.1 Score=34.93 Aligned_cols=54 Identities=9% Similarity=0.248 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCeEEEeecccccc----ccccccceeeeecCCCceEeecCCceehh
Q 019830 246 IEEAILEAEEKGARVISLGLLNQGE----ELNRYGGLFVHKNPELKIKVVDGSSLAVA 299 (335)
Q Consensus 246 ie~ail~a~~~g~kv~slg~lN~~~----~ln~~g~l~v~~~p~l~vrvv~g~~l~aa 299 (335)
+++++.+.-+.|-.||++.+..+-- +.+-.-..+..++|+.+|+|+|-.+..++
T Consensus 68 ~~~~~~~~~~~~~~vi~i~iSs~LSgtyn~a~~aa~~~~~~~~~~~i~ViDS~~~s~g 125 (287)
T d1pzxa_ 68 MKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLTIIDSKCASLG 125 (287)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEEEEECCCCHHH
T ss_pred HHHHHHHHHhCCCcEEEEECCcccchHHHHHHHHHHHHHhhCCCceEEEEeCCcchHH
Confidence 5667777777788899998876632 22233345667899999999999887654
No 4
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]}
Probab=43.71 E-value=9.7 Score=28.80 Aligned_cols=53 Identities=21% Similarity=0.098 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCeEEEee-cccc---------ccccccccceeeeecC---CCceEeecCCce
Q 019830 244 RLIEEAILEAEEKGARVISLG-LLNQ---------GEELNRYGGLFVHKNP---ELKIKVVDGSSL 296 (335)
Q Consensus 244 ~~ie~ail~a~~~g~kv~slg-~lN~---------~~~ln~~g~l~v~~~p---~l~vrvv~g~~l 296 (335)
..|.+|+.+|-++||+|==+- --+. .+..+.+...+....+ .-|+=||||.+.
T Consensus 39 ~~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~K~~ivD~~~~ 104 (152)
T d1byra_ 39 PDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDSNFPIQHDKVIIVDNVTV 104 (152)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTCCEEEECSSSCCCCCEEEETTTEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEEeecccchhhHHHHHHhhhccccccccccccccccceEEecCcee
Confidence 357889999999999995542 1111 1222333333333322 458888888653
No 5
>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]}
Probab=37.70 E-value=11 Score=27.74 Aligned_cols=25 Identities=16% Similarity=0.411 Sum_probs=21.0
Q ss_pred hhH-HHHHHHHHHHHHHcCCeEEEee
Q 019830 240 ESI-NRLIEEAILEAEEKGARVISLG 264 (335)
Q Consensus 240 ~~i-n~~ie~ail~a~~~g~kv~slg 264 (335)
.|| ++++++|+.+|.+.|.||+.+.
T Consensus 50 ~Gig~~Lv~~~l~~Ar~~g~kvvp~c 75 (102)
T d1r57a_ 50 QGVGKKLLKAVVEHARENNLKIIASC 75 (102)
T ss_dssp TCTHHHHHHHHHHHHHHHTCEEEESS
T ss_pred ccHHHHHHHHHHHHHHHCCCEEEEec
Confidence 344 6788999999999999999875
No 6
>d1vkya_ e.53.1.1 (A:) Queuosine biosynthesis protein queA {Thermotoga maritima [TaxId: 2336]}
Probab=37.47 E-value=7 Score=35.23 Aligned_cols=57 Identities=25% Similarity=0.435 Sum_probs=40.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHcCCeEEEeec-----------cccccccccccceeeeecCCCceEeecC
Q 019830 235 SQQPNESINRLIEEAILEAEEKGARVISLGL-----------LNQGEELNRYGGLFVHKNPELKIKVVDG 293 (335)
Q Consensus 235 ~~~~~~~in~~ie~ail~a~~~g~kv~slg~-----------lN~~~~ln~~g~l~v~~~p~l~vrvv~g 293 (335)
+-.|.-.|++.--++|.+|.+.|=||++.|- .|..++..|--.||+ +|.-+.|+|||
T Consensus 216 mh~E~~~I~~~t~~~i~~ak~~g~rIiAVGTT~~R~LEs~~~~~~~~~~~G~T~lfI--~Pgy~f~~vd~ 283 (332)
T d1vkya_ 216 MHEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLPEQEEYVGKTDLFI--YPPFEFKLVDA 283 (332)
T ss_dssp -CCCEEEECHHHHHHHHHHHHHTCCEEEESHHHHHHHHHHTTSCCCSSEEECCCCCC--CSSCCCSSCSE
T ss_pred CccceeecCHHHHHHHHHHHHcCCcEEEEehHHHHHHHHHHHhccccccCCccceEE--CCCCCceEeCe
Confidence 3345556777778999999999999999882 233344444445665 69999999997
No 7
>d1vpua_ g.34.1.1 (A:) HIV-1 VPU cytoplasmic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=34.78 E-value=4.2 Score=26.69 Aligned_cols=17 Identities=41% Similarity=0.663 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHcC
Q 019830 241 SINRLIEEAILEAEEKG 257 (335)
Q Consensus 241 ~in~~ie~ail~a~~~g 257 (335)
.|+++|++-+.+|+.+|
T Consensus 2 kIdrLi~RIrERAEDSG 18 (45)
T d1vpua_ 2 QIDRLIDRITERAEDSG 18 (45)
T ss_dssp CHHHHHHHHHHTTCHHH
T ss_pred cHHHHHHHHHHHcccCC
Confidence 48999999999999988
No 8
>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]}
Probab=34.38 E-value=8.4 Score=30.18 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=26.1
Q ss_pred cCCchhHH-HHHHHHHHHHHHcCCeEEEe--ecccccc
Q 019830 236 QQPNESIN-RLIEEAILEAEEKGARVISL--GLLNQGE 270 (335)
Q Consensus 236 ~~~~~~in-~~ie~ail~a~~~g~kv~sl--g~lN~~~ 270 (335)
..+..||- ++|+.|+.+|.+.|+|.+.| +..+.|+
T Consensus 81 ~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~ 118 (151)
T d1yx0a1 81 SHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFE 118 (151)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHH
T ss_pred HHHhCChhHHHHHHHHHHHHHCCCcEEEEEeccccchH
Confidence 34567776 46777788999999999999 4555543
No 9
>d1wiha_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Mouse (Mus musculus), mitochondrial [TaxId: 10090]}
Probab=32.27 E-value=6.3 Score=28.82 Aligned_cols=19 Identities=16% Similarity=-0.011 Sum_probs=16.1
Q ss_pred cCCchhHHHHHHHHHHHHH
Q 019830 236 QQPNESINRLIEEAILEAE 254 (335)
Q Consensus 236 ~~~~~~in~~ie~ail~a~ 254 (335)
||.+++..+.|||||.+||
T Consensus 40 ~~D~~~~~~~i~kAI~~S~ 58 (84)
T d1wiha_ 40 MASFPECTAAAIKAIRESG 58 (84)
T ss_dssp CTTCTTSHHHHHHHHHTTT
T ss_pred EeecccccHHHHHHHHhcC
Confidence 7776777888999999987
No 10
>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]}
Probab=31.31 E-value=17 Score=26.59 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=26.7
Q ss_pred cCCchhHH-HHHHHHHHHHHHcCCeEEEeecccccc
Q 019830 236 QQPNESIN-RLIEEAILEAEEKGARVISLGLLNQGE 270 (335)
Q Consensus 236 ~~~~~~in-~~ie~ail~a~~~g~kv~slg~lN~~~ 270 (335)
..+..||- +++++++..|.++|++.+.|...-.|+
T Consensus 93 ~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~ 128 (150)
T d1z4ea1 93 AARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRP 128 (150)
T ss_dssp TSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCT
T ss_pred HHcCCChhHHHHHHHHHHHHHcCCCEEEEEEcCCCH
Confidence 45666775 466777779999999999998776665
No 11
>d1wina_ d.43.2.1 (A:) Flotillin-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.11 E-value=15 Score=28.23 Aligned_cols=39 Identities=13% Similarity=0.328 Sum_probs=30.3
Q ss_pred cCCccccccCCchhHHHHHHHHHH-HHHHcCCeEEEeeccc
Q 019830 228 KYNMQYFSQQPNESINRLIEEAIL-EAEEKGARVISLGLLN 267 (335)
Q Consensus 228 r~~~~y~~~~~~~~in~~ie~ail-~a~~~g~kv~slg~lN 267 (335)
++.+.-.+ .+++.|++.|++.|. ++++.|++|.+..+-+
T Consensus 82 ~~~l~el~-~~R~~i~~~v~~~i~~~l~~~Gi~v~~v~I~d 121 (143)
T d1wina_ 82 TLTVEQIY-QDRDQFAKLVREVAAPDVGRMGIEILSFTIKD 121 (143)
T ss_dssp HSCHHHHH-HTHHHHHHHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred cccHHHHH-hCHHHHHHHHHHHHHHHHHHhCeEEEEEEEEe
Confidence 34443333 478999999999998 7899999999988753
No 12
>d1x94a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Vibrio cholerae [TaxId: 666]}
Probab=30.73 E-value=16 Score=29.63 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHcCCeEEEeeccccccccccccceeeeecCCCceEee
Q 019830 242 INRLIEEAILEAEEKGARVISLGLLNQGEELNRYGGLFVHKNPELKIKVV 291 (335)
Q Consensus 242 in~~ie~ail~a~~~g~kv~slg~lN~~~~ln~~g~l~v~~~p~l~vrvv 291 (335)
=|+-|-+|+..|.++|+||+++---+ ||.| .+..|.-+.|-
T Consensus 123 ~s~~ii~a~~~Ak~~g~~~i~it~~~-------~~~l--~~~~D~~I~vp 163 (191)
T d1x94a_ 123 NSGNILKAIEAAKAKGMKTIALTGKD-------GGKM--AGLADVEIRVP 163 (191)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEEETT-------CGGG--TTTSSEEEEES
T ss_pred ccccchhhHHHHHhCCCeEEEEecCC-------CCcc--cccCCEEEEeC
Confidence 37888899999999999999987633 3333 34456666653
No 13
>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=29.07 E-value=18 Score=27.69 Aligned_cols=30 Identities=30% Similarity=0.308 Sum_probs=24.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHcCCeEEEee
Q 019830 235 SQQPNESINRLIEEAILEAEEKGARVISLG 264 (335)
Q Consensus 235 ~~~~~~~in~~ie~ail~a~~~g~kv~slg 264 (335)
+|-..|.+..++|+.|--++..|++|.++.
T Consensus 2 mp~p~e~~~~l~~~~~pf~~~~Gi~v~~~~ 31 (153)
T d1sh8a_ 2 MPLPTELARHLTEEKIAFVQRSGLRAEVLE 31 (153)
T ss_dssp CSSCHHHHHHHHHHSSHHHHHHTCEEEEEE
T ss_pred CCchHHHHHHHHHccChHHHHcCcEEEEEe
Confidence 355577788889998888999999998875
No 14
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.21 E-value=29 Score=28.78 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=31.6
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHcCCeEEEeecc
Q 019830 231 MQYFSQQPNESINRLIEEAILEAEEKGARVISLGLL 266 (335)
Q Consensus 231 ~~y~~~~~~~~in~~ie~ail~a~~~g~kv~slg~l 266 (335)
+-||-...++-=++.+|.|+.+|++.|+|-+-++-.
T Consensus 5 i~YF~~~G~~NT~~~l~~a~~ra~elgi~~iVvASt 40 (186)
T d1t57a_ 5 ICYFEEPGKENTERVLELVGERADQLGIRNFVVASV 40 (186)
T ss_dssp EEEESSCSGGGHHHHHHHHHHHHHHHTCCEEEEECS
T ss_pred eEEecCCCcccHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 359999999999999999999999999988877643
No 15
>d1pyya1 d.11.1.1 (A:632-692) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=25.00 E-value=42 Score=22.28 Aligned_cols=46 Identities=9% Similarity=-0.015 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHcCCeEEEeeccccccccccccceeeeecCCCceEeecCCcee
Q 019830 242 INRLIEEAILEAEEKGARVISLGLLNQGEELNRYGGLFVHKNPELKIKVVDGSSLA 297 (335)
Q Consensus 242 in~~ie~ail~a~~~g~kv~slg~lN~~~~ln~~g~l~v~~~p~l~vrvv~g~~l~ 297 (335)
.|.-+++|+...++.|.+|.-. |+|.-.+++.|.-.-+|.-|++.+
T Consensus 11 ~g~s~~~A~~~L~~~gl~~~v~----------G~G~~V~~QsP~~G~~v~~g~~V~ 56 (61)
T d1pyya1 11 KDISPGDLAEELRRNLVQPIVV----------GTGTKIKNSSAEEGKNLAPNQQVL 56 (61)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEE----------SSCSSEEEESSCTTCBCCTTCEEE
T ss_pred cCCCHHHHHHHHHHCCCeEEEe----------cCCCEEEEEccCCCcccCCCCEEE
Confidence 3455789999999999998855 566666688888887777777653
No 16
>d1snoa_ b.40.1.1 (A:) Staphylococcal nuclease {Staphylococcus aureus [TaxId: 1280]}
Probab=24.96 E-value=10 Score=28.54 Aligned_cols=17 Identities=35% Similarity=0.690 Sum_probs=12.7
Q ss_pred ecCCCceEeecCCceeh
Q 019830 282 KNPELKIKVVDGSSLAV 298 (335)
Q Consensus 282 ~~p~l~vrvv~g~~l~a 298 (335)
|.|-.=+||+||+|+..
T Consensus 4 ~~~a~V~~V~DGDT~~v 20 (136)
T d1snoa_ 4 KEPATLIKAIDGDTVKL 20 (136)
T ss_dssp EEEEEEEEECSSSEEEE
T ss_pred ccceEEEEEEcCCEEEE
Confidence 34444579999999985
No 17
>d2i5ua1 a.275.1.1 (A:2-75) Uncaracterized protein EF2839 {Enterococcus faecalis [TaxId: 1351]}
Probab=24.53 E-value=15 Score=26.04 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=21.7
Q ss_pred ccccccCCchhHHH-----------------HHHHHHHHHHHcCCe
Q 019830 231 MQYFSQQPNESINR-----------------LIEEAILEAEEKGAR 259 (335)
Q Consensus 231 ~~y~~~~~~~~in~-----------------~ie~ail~a~~~g~k 259 (335)
|--.+|.+.|.|+. +|.+|+.+|-+.|+|
T Consensus 10 fG~lsp~~~e~i~~wlddf~~~~~~~~~~~elv~~Al~~Av~~n~~ 55 (74)
T d2i5ua1 10 FGLMSSKTMTDFDYWISDFEKIGASQKEAEQLIVKAIEIAIDANAR 55 (74)
T ss_dssp SCSCCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCcCHHHHHHHHHHHHHhhcccccccCcHHHHHHHHHHHHHcCCc
Confidence 33456777787774 778899999888876
No 18
>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.29 E-value=63 Score=24.20 Aligned_cols=47 Identities=19% Similarity=0.317 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCeEEEeeccccccccccccceeeeecC-CCceEeecCCceeh
Q 019830 246 IEEAILEAEEKGARVISLGLLNQGEELNRYGGLFVHKNP-ELKIKVVDGSSLAV 298 (335)
Q Consensus 246 ie~ail~a~~~g~kv~slg~lN~~~~ln~~g~l~v~~~p-~l~vrvv~g~~l~a 298 (335)
++++..+.+++|+|+.+=. . +-.+.+..|+ |.| ...|-+|--+.|++
T Consensus 127 ~~~~~~~l~~~Gv~~~~~p--~---~g~~~~~~f~-~DPdG~~IElvq~~~~~~ 174 (176)
T d1qipa_ 127 VYSACKRFEELGVKFVKKP--D---DGKMKGLAFI-QDPDGYWIEILNPNKMAT 174 (176)
T ss_dssp HHHHHHHHHHTTCEEEECT--T---SSSSTTCEEE-ECTTCCEEEEECTTTGGG
T ss_pred HHHHHHHHHHCCCEEeeCC--c---cCCceEEEEE-ECCCCCEEEEEeCCCCCc
Confidence 7888888899999999743 1 1112233454 788 57888888887764
No 19
>d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.01 E-value=28 Score=25.30 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHcCCeEEEee
Q 019830 242 INRLIEEAILEAEEKGARVISLG 264 (335)
Q Consensus 242 in~~ie~ail~a~~~g~kv~slg 264 (335)
-.+++++|+..|.+.|.||+.+.
T Consensus 50 a~~Lv~~al~~ar~~g~kV~P~C 72 (95)
T d1xmta_ 50 ASHLCVAAFEHASSHSISIIPSC 72 (95)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHHHHHCCCEEEEeC
Confidence 46778888889999999999764
No 20
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.54 E-value=35 Score=28.35 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=31.3
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHcCCeEEEeec
Q 019830 231 MQYFSQQPNESINRLIEEAILEAEEKGARVISLGL 265 (335)
Q Consensus 231 ~~y~~~~~~~~in~~ie~ail~a~~~g~kv~slg~ 265 (335)
+-||-..+++-=++.+|.|+.+|++.|+|-+-++-
T Consensus 6 i~YF~~~G~~NT~~~l~~a~~rA~Elgi~~iVvAS 40 (190)
T d1vp8a_ 6 IVYFNKPGRENTEETLRLAVERAKELGIKHLVVAS 40 (190)
T ss_dssp CEEESSCSGGGHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred EEEecCCCcccHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 45899999999999999999999999999887764
No 21
>d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]}
Probab=22.34 E-value=25 Score=27.82 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHcCCeEEEeeccccccccccccce
Q 019830 242 INRLIEEAILEAEEKGARVISLGLLNQGEELNRYGGL 278 (335)
Q Consensus 242 in~~ie~ail~a~~~g~kv~slg~lN~~~~ln~~g~l 278 (335)
=++.+-+++..|.++|+||+++-. |++-.|-+....
T Consensus 91 ~t~~~i~~~~~ak~~g~~iI~IT~-~~~s~La~~ad~ 126 (186)
T d1m3sa_ 91 ETKSLIHTAAKAKSLHGIVAALTI-NPESSIGKQADL 126 (186)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEES-CTTSHHHHHCSE
T ss_pred chhhhHHHHHHHHHCCCCEEEEec-CCCchhhHhCCE
Confidence 356777888999999999999855 555566665553
No 22
>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=22.04 E-value=22 Score=28.08 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=22.9
Q ss_pred CchhHHHHHHHHHHHHHHcCCeEEEeec
Q 019830 238 PNESINRLIEEAILEAEEKGARVISLGL 265 (335)
Q Consensus 238 ~~~~in~~ie~ail~a~~~g~kv~slg~ 265 (335)
-..|-++.+-+++..|.++|+||+++-.
T Consensus 87 S~sG~t~~~i~~~~~ak~~g~~vI~IT~ 114 (177)
T d1jeoa_ 87 SGSGRTESVLTVAKKAKNINNNIIAIVC 114 (177)
T ss_dssp ESSSCCHHHHHHHHHHHTTCSCEEEEES
T ss_pred ccccchHHHHHHHHHHHHcCCceeEEec
Confidence 3445677788888999999999999983
No 23
>d1tk9a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Campylobacter jejuni [TaxId: 197]}
Probab=21.51 E-value=35 Score=27.59 Aligned_cols=24 Identities=21% Similarity=0.126 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEeecc
Q 019830 243 NRLIEEAILEAEEKGARVISLGLL 266 (335)
Q Consensus 243 n~~ie~ail~a~~~g~kv~slg~l 266 (335)
.+-|-+|+..|.++|+|+++|---
T Consensus 123 S~nii~a~~~Ak~~g~~ti~ltg~ 146 (188)
T d1tk9a_ 123 SPNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CchhHHHHHHHHhhcceEEEEeCC
Confidence 466778999999999999998653
No 24
>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.00 E-value=29 Score=25.41 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=27.9
Q ss_pred cCCchhHHH-HHHHHHHHHHHcCCeEEEeeccccccc
Q 019830 236 QQPNESINR-LIEEAILEAEEKGARVISLGLLNQGEE 271 (335)
Q Consensus 236 ~~~~~~in~-~ie~ail~a~~~g~kv~slg~lN~~~~ 271 (335)
..+..||.+ +++.++..|.+.|++-+.|....+|+.
T Consensus 89 ~~r~~Gig~~Ll~~~~~~ak~~g~~~i~l~~~~~N~~ 125 (153)
T d2euia1 89 EARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEV 125 (153)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHH
T ss_pred cccCcchhhHHHHHHhhhHHHhhhccceEEecCCCHH
Confidence 347778875 556666689999999999998887765
No 25
>d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]}
Probab=20.39 E-value=26 Score=26.03 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=25.9
Q ss_pred cCCchhHHHHHHHHHH-HHHHcCCeEEEeeccccccc
Q 019830 236 QQPNESINRLIEEAIL-EAEEKGARVISLGLLNQGEE 271 (335)
Q Consensus 236 ~~~~~~in~~ie~ail-~a~~~g~kv~slg~lN~~~~ 271 (335)
..+..||-+.+=+++. .|.+.|++.+.|-....|.+
T Consensus 93 ~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~n~A 129 (149)
T d1vkca_ 93 WARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPA 129 (149)
T ss_dssp GGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTH
T ss_pred HHcCCChHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
Confidence 4567789876555555 79999999999976544444
Done!