BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019836
(335 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65572|CCD1_ARATH Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis
thaliana GN=CCD1 PE=1 SV=2
Length = 538
Score = 546 bits (1407), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/331 (78%), Positives = 293/331 (88%), Gaps = 4/331 (1%)
Query: 1 MLDYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDPVPITMSAPI 60
++DYDKRL H FTAHPK+DP T EMFTFGY+ TPPY+TYRVISKDG MHDPVPIT+S PI
Sbjct: 208 IIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYLTYRVISKDGIMHDPVPITISEPI 267
Query: 61 MMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWF 120
MMHDFAITE YAIF+DLPM FR KEMVKE K+IY+FDPT KARFGVLPRYA+D+L IRWF
Sbjct: 268 MMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWF 327
Query: 121 ELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKT 180
ELPNC+IFHNANAW EEEDEVVLITCR+ NPDLDM +G +KE LE+ ELYEMRFNMKT
Sbjct: 328 ELPNCFIFHNANAW-EEEDEVVLITCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKT 386
Query: 181 GLASQKKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKL 240
G ASQKKLS + VDFPRINE Y G+KQRYVYG+IL++IAKVTG+IKFDL AE ETGK L
Sbjct: 387 GSASQKKLSASAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRML 446
Query: 241 EVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKT 300
EVGGN+KGI+DLG GR+GSEA++VPRE T+EEDDGYLIF VHDENTGKS V VIDAKT
Sbjct: 447 EVGGNIKGIYDLGEGRYGSEAIYVPRE---TAEEDDGYLIFFVHDENTGKSCVTVIDAKT 503
Query: 301 MSADPVAVIELPHRVPYGFHGIFLSEEQLEE 331
MSA+PVAV+ELPHRVPYGFH +F++EEQL+E
Sbjct: 504 MSAEPVAVVELPHRVPYGFHALFVTEEQLQE 534
>sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum
GN=CCD1 PE=2 SV=1
Length = 541
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/335 (75%), Positives = 293/335 (87%), Gaps = 1/335 (0%)
Query: 1 MLDYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDPVPITMSAPI 60
MLDYDKRL H FTAHPK+DP+T EMFTFGY+ T PYVTYRVISKDGFM DPVPIT+S P+
Sbjct: 208 MLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTAPYVTYRVISKDGFMQDPVPITISDPV 267
Query: 61 MMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWF 120
MMHDFAITENY+IF+DLP+ FR KEMVK LI++FD T KARFGVLPRYA+DD IRWF
Sbjct: 268 MMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKHIRWF 327
Query: 121 ELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKT 180
ELPNC+IFHNANAWEEE DE+VLITCR+ NP+LD+ G +KE L++ + ELYEMRFNMKT
Sbjct: 328 ELPNCFIFHNANAWEEE-DEIVLITCRLENPNLDVVGGAVKEKLDNFSNELYEMRFNMKT 386
Query: 181 GLASQKKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKL 240
G ASQKKLS + VDFPR+NE Y GRKQRYVYG+ L++IAKVTG+IKFDL AEP++GKTKL
Sbjct: 387 GEASQKKLSASTVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDSGKTKL 446
Query: 241 EVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKT 300
EVGGNV+G++DLGPGRFGSEAV+VPR P + SEEDDGYLIF VHDENTGKS V+VIDAK
Sbjct: 447 EVGGNVQGLYDLGPGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVIDAKR 506
Query: 301 MSADPVAVIELPHRVPYGFHGIFLSEEQLEELAKL 335
MSA+PVAV+ELP RVPYGFH F++E+QL+E AK
Sbjct: 507 MSAEPVAVVELPQRVPYGFHAFFVTEDQLQEQAKF 541
>sp|Q94IR2|CCD1_PHAVU Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus
vulgaris GN=CCD1 PE=1 SV=1
Length = 543
Score = 539 bits (1389), Expect = e-153, Method: Compositional matrix adjust.
Identities = 251/335 (74%), Positives = 292/335 (87%), Gaps = 1/335 (0%)
Query: 1 MLDYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDPVPITMSAPI 60
MLDYDKRL H FTAHPK+DP+T EMF+FGY TPPY+TYRVISKDG+MHDPVPIT+S PI
Sbjct: 210 MLDYDKRLGHSFTAHPKVDPFTGEMFSFGYAHTPPYITYRVISKDGYMHDPVPITISDPI 269
Query: 61 MMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWF 120
MMHDFAITENYA+F+DLP+ FR KEMVK LI++FD T KARFGVLPRYA+D+ IRWF
Sbjct: 270 MMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEQHIRWF 329
Query: 121 ELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKT 180
ELPNC+IFHNANAWEEE DEVVLITCR++NP LD G ++E LE+ + ELYEMRFNMKT
Sbjct: 330 ELPNCFIFHNANAWEEE-DEVVLITCRLQNPKLDNVGGTVQEKLENFSNELYEMRFNMKT 388
Query: 181 GLASQKKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKL 240
G ASQKKLS + VDFPR+NE+Y GRKQRYVYG+ L++IAKVTG+IKFDL AEP+ GK KL
Sbjct: 389 GEASQKKLSASTVDFPRVNENYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDHGKEKL 448
Query: 241 EVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKT 300
EVGGNV+G++DLGPG+FGSEAV++PR P SEEDDGYL+ VHDEN GKS V+VIDAKT
Sbjct: 449 EVGGNVQGLYDLGPGKFGSEAVYIPRVPGIESEEDDGYLVLFVHDENAGKSFVHVIDAKT 508
Query: 301 MSADPVAVIELPHRVPYGFHGIFLSEEQLEELAKL 335
MSADPVAV+ELP+RVPYGFH F++EEQL+E AKL
Sbjct: 509 MSADPVAVVELPNRVPYGFHAFFVTEEQLQEQAKL 543
>sp|Q84KG5|CCD_CROSA Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus
GN=CCD PE=1 SV=1
Length = 546
Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/330 (77%), Positives = 286/330 (86%), Gaps = 1/330 (0%)
Query: 1 MLDYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDPVPITMSAPI 60
+LDYDKRL+H FTAHPK+DP+TDEMFTFGY TPPYVTYRVISKDG M DPVPIT+ A +
Sbjct: 212 LLDYDKRLSHSFTAHPKVDPFTDEMFTFGYAHTPPYVTYRVISKDGVMRDPVPITIPASV 271
Query: 61 MMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWF 120
MMHDFAITENY+IF+DLP+ F+ KEMVK KLI++FD T KARFGVLPRYA+DD IRWF
Sbjct: 272 MMHDFAITENYSIFMDLPLYFQPKEMVKGGKLIFSFDATKKARFGVLPRYAKDDSLIRWF 331
Query: 121 ELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKT 180
ELPNC+IFHNANAWEE DEVVLITCR+ NPDLDM NG +KE LE+ ELYEMRFNMKT
Sbjct: 332 ELPNCFIFHNANAWEEG-DEVVLITCRLENPDLDMVNGAVKEKLENFKNELYEMRFNMKT 390
Query: 181 GLASQKKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKL 240
G ASQK+LS + VDFPRINE Y RKQRYVYG+IL+NI KV G+IKFDL AEPE GK KL
Sbjct: 391 GAASQKQLSVSAVDFPRINESYTTRKQRYVYGTILDNITKVKGIIKFDLHAEPEAGKKKL 450
Query: 241 EVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKT 300
EVGGNV+GIFDLGPGR+GSEAVFVPRE SEEDDGYLIF VHDENTGKS V VIDAKT
Sbjct: 451 EVGGNVQGIFDLGPGRYGSEAVFVPRERGIKSEEDDGYLIFFVHDENTGKSEVNVIDAKT 510
Query: 301 MSADPVAVIELPHRVPYGFHGIFLSEEQLE 330
MSA+PVAV+ELP+RVPYGFH F++EEQL+
Sbjct: 511 MSAEPVAVVELPNRVPYGFHAFFVNEEQLQ 540
>sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic
OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1
Length = 595
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 191/338 (56%), Gaps = 25/338 (7%)
Query: 3 DYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDPVPI-TMSAPIM 61
D+D +L TAHPK DP T E F F Y PP++TY G VPI +M++P
Sbjct: 275 DFDGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRFDSAGKKQRDVPIFSMTSPSF 334
Query: 62 MHDFAITENYAIFLDLPMCFRQK--EMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRW 119
+HDFAIT+ +AIF ++ + R ++V E D R GV+P+YA D+ +++W
Sbjct: 335 LHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKW 394
Query: 120 FELPNCYIFHNANAWEEEE-DEVVLITCRVRNPDLDMFNGPLKETLE--DQTTELYE-MR 175
FE+P I H NAW+E++ + VVLI + + ++ TLE D L E ++
Sbjct: 395 FEVPGFNIIHAINAWDEDDGNSVVLIAPNIMS---------IEHTLERMDLVHALVEKVK 445
Query: 176 FNMKTGLASQKKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPET 235
++ TG+ + +S +DF IN ++GR RYVY +I + + K++G++K D+ +
Sbjct: 446 IDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLDVS---KG 502
Query: 236 GKTKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSS-TSEEDDGYLIFHVHDENTGKSAVY 294
+ V + G G +G E FV R+P + +EEDDGY++ +VHDE TG+S
Sbjct: 503 DRDDCTVARRM-----YGSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFL 557
Query: 295 VIDAKTMSADPVAVIELPHRVPYGFHGIFLSEEQLEEL 332
V+DAK+ + VA + LP RVPYGFHG+F+ E L +L
Sbjct: 558 VMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESDLNKL 595
>sp|Q9M9F5|NCED9_ARATH 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1
Length = 657
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 189/335 (56%), Gaps = 28/335 (8%)
Query: 3 DYDKRLNHPFTAHPKIDPYTDEMFTFGY-TQTPPYVTYRVISKDGFMHDPVPITMSAPIM 61
D+D +L AHPKIDP T E+F Y + PY+ Y + DG V I + P M
Sbjct: 345 DFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTM 404
Query: 62 MHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWFE 121
+HDFAITEN+ + D + FR EM++ + +D K+RFG+L + A+D I+W E
Sbjct: 405 IHDFAITENFVVIPDQQVVFRLPEMIRGGSPV-VYDEKKKSRFGILNKNAKDASSIQWIE 463
Query: 122 LPNCYIFHNANAWEE-EEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKT 180
+P+C+ FH N+WEE E DEVV+I + PD +FN E E + L E+R N+KT
Sbjct: 464 VPDCFCFHLWNSWEEPETDEVVVIGSCMTPPD-SIFN----EHDETLQSVLSEIRLNLKT 518
Query: 181 GLASQKKLSPACVDFPR--INEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKT 238
G ++++ + V+ +N + +GRK RY Y ++ E KV+G K DL TG+
Sbjct: 519 GESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDL----STGEI 574
Query: 239 KLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDA 298
+ K I+ G G++G E +F+ PS EED GY++ VHDE KS + +I+A
Sbjct: 575 R-------KYIY--GEGKYGGEPLFL---PSGDGEEDGGYIMVFVHDEEKVKSELQLINA 622
Query: 299 KTMSADPVAVIELPHRVPYGFHGIFLSEEQLEELA 333
M + A + LP RVPYGFHG F+S+E L + A
Sbjct: 623 VNMKLE--ATVTLPSRVPYGFHGTFISKEDLSKQA 655
>sp|Q84K96|ZCD_CROSA Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus
sativus GN=ZCD PE=1 SV=1
Length = 369
Score = 208 bits (529), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 180/323 (55%), Gaps = 23/323 (7%)
Query: 13 TAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDP-VPI-TMSAPIMMHDFAITEN 70
TAHPK DP T E F+F Y PYVTY DG P VPI + P +HDFAITE+
Sbjct: 60 TAHPKTDPVTGETFSFSYGPIQPYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEH 119
Query: 71 YAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWFELPNCYIFHN 130
YA+F D+ + + E+V+ ++I D R G+LPRYA D ++RWF++P + H
Sbjct: 120 YAVFPDIQIVMKPAEIVRGRRMI-GPDLEKVPRLGLLPRYATSDSEMRWFDVPGFNMVHV 178
Query: 131 ANAWEEEEDEVVLITCRVRNP---DLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK 187
NAWEEE EVV+I +P +D F+ L + E+ R +K+G S+
Sbjct: 179 VNAWEEEGGEVVVIVAPNVSPIENAIDRFD------LLHVSVEM--ARIELKSGSVSRTL 230
Query: 188 LSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVK 247
LS +DF I+ Y GRK RY Y + + + K+ G++K D G+ + V
Sbjct: 231 LSAENLDFGVIHRGYSGRKSRYAYLGVGDPMPKIRGVVKVDFEL---AGRGECVVARR-- 285
Query: 248 GIFDLGPGRFGSEAVFVP-REPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPV 306
+ G G FG E FVP S EEDDGY++ ++HDE G+S+ V+DA++ + +
Sbjct: 286 ---EFGVGCFGGEPFFVPASSKKSGGEEDDGYVVSYLHDEGKGESSFVVMDARSPELEIL 342
Query: 307 AVIELPHRVPYGFHGIFLSEEQL 329
A + LP RVPYGFHG+F++E +L
Sbjct: 343 AEVVLPRRVPYGFHGLFVTEAEL 365
>sp|O24592|NCED1_MAIZE 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays
GN=VP14 PE=1 SV=2
Length = 604
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 185/339 (54%), Gaps = 29/339 (8%)
Query: 3 DYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTP-PYVTYRVISKDGFMHDPVPITMSAPIM 61
D+D +L AHPK+DP T E+ Y PY+ Y DG D V I + P M
Sbjct: 286 DFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTM 345
Query: 62 MHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWFE 121
+HDFAITEN + D + F+ +EM++ + D +RFGVLP++A D ++ W +
Sbjct: 346 IHDFAITENLVVVPDHQVVFKLQEMLRGGSPV-VLDKEKTSRFGVLPKHAADASEMAWVD 404
Query: 122 LPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTG 181
+P+C+ FH NAWE+E V++ P +FN E+ E + L E+R + +TG
Sbjct: 405 VPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFN----ESDERLESVLTEIRLDARTG 460
Query: 182 LASQKKLSPAC----VDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGK 237
++++ + P ++ +N + +GR+ RY Y ++ E KV+G K DL TG+
Sbjct: 461 RSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDL----STGE 516
Query: 238 -TKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSST--SEEDDGYLIFHVHDENTGKSAVY 294
TK F+ G GRFG E FVP +P++ EDDGY++ VHDE G S +
Sbjct: 517 LTK----------FEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELL 566
Query: 295 VIDAKTMSADPVAVIELPHRVPYGFHGIFLSEEQLEELA 333
V++A M + A ++LP RVP+GFHG F++ ++LE A
Sbjct: 567 VVNAADMRLE--ATVQLPSRVPFGFHGTFITGQELEAQA 603
>sp|Q9C6Z1|NCED5_ARATH Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1
Length = 589
Score = 201 bits (511), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 177/333 (53%), Gaps = 26/333 (7%)
Query: 2 LDYDKRLNHPFTAHPKIDPYTDEMFTFGY-TQTPPYVTYRVISKDGFMHDPVPITMSAPI 60
D+D +L+ AHPKIDP T E+F Y PY+ Y S +G V I +++P
Sbjct: 274 FDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPT 333
Query: 61 MMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWF 120
MMHDFAITEN+ + D + F+ +M K +D +RFG+LPR A+D ++ W
Sbjct: 334 MMHDFAITENFVVIPDQQVVFKLSDMFL-GKSPVKYDGEKISRFGILPRNAKDASEMVWV 392
Query: 121 ELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKT 180
E P + FH NAWE E + V++ P +FN E E + L E+R N+KT
Sbjct: 393 ESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFN----ECDEQLNSVLSEIRLNLKT 448
Query: 181 GLASQKKLSPACVDF----PRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETG 236
G ++++ + P V +N + +GRK RY Y +I E KV+G K DL
Sbjct: 449 GKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLST----- 503
Query: 237 KTKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVI 296
G VK F G ++G E F+PR S EDDGY++ VHDE + +S ++++
Sbjct: 504 -------GEVKNHF-YGGKKYGGEPFFLPRGLESDG-EDDGYIMSFVHDEESWESELHIV 554
Query: 297 DAKTMSADPVAVIELPHRVPYGFHGIFLSEEQL 329
+A T+ + A ++LP RVPYGFHG F++ +
Sbjct: 555 NAVTLELE--ATVKLPSRVPYGFHGTFVNSADM 585
>sp|Q9LRR7|NCED3_ARATH 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1
Length = 599
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 184/337 (54%), Gaps = 31/337 (9%)
Query: 2 LDYDKRLNHPFTAHPKIDPYTDEMFTFGY-TQTPPYVTYRVISKDGFMHDPVPITMSAPI 60
D+D +L AHPK+DP + E+F Y + PY+ Y S DG V I + P
Sbjct: 284 FDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPT 343
Query: 61 MMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWF 120
MMHDFAITEN+ + D + F+ EM++ + +D ARFG+L +YA D I+W
Sbjct: 344 MMHDFAITENFVVVPDQQVVFKLPEMIRGGSPV-VYDKNKVARFGILDKYAEDSSNIKWI 402
Query: 121 ELPNCYIFHNANAWEE-EEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMK 179
+ P+C+ FH NAWEE E DEVV+I + PD +FN E+ E+ + L E+R N+K
Sbjct: 403 DAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPD-SIFN----ESDENLKSVLSEIRLNLK 457
Query: 180 TGLASQKKL-----SPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPE 234
TG ++++ + ++ +N + +GRK ++ Y ++ E KV+G K DL
Sbjct: 458 TGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDL----T 513
Query: 235 TGKTKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVY 294
TG+ K + G+ R+G E +F+P E E Y++ VHDE T KS +
Sbjct: 514 TGEVKKHLYGD---------NRYGGEPLFLPGEGGEEDEG---YILCFVHDEKTWKSELQ 561
Query: 295 VIDAKTMSADPVAVIELPHRVPYGFHGIFLSEEQLEE 331
+++A ++ + A ++LP RVPYGFHG F+ + L +
Sbjct: 562 IVNAVSLEVE--ATVKLPSRVPYGFHGTFIGADDLAK 596
>sp|Q9LRM7|NCED6_ARATH 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1
Length = 577
Score = 191 bits (484), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 176/334 (52%), Gaps = 30/334 (8%)
Query: 4 YDKRLNHPFTAHPKIDPYTDEMFTFGY-TQTPPYVTYRVISKDGFMHDPVPITMSAPIMM 62
+D +++ AHPK+D T ++ T Y P++ Y + G V IT+ P M+
Sbjct: 265 FDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITLPEPTMI 324
Query: 63 HDFAITENYAIFLDLPMCFRQKEMVKENK-LIYAFDPTIKARFGVLPRYARDDLQIRWFE 121
HDFAITEN+ + D M F+ EM++ +IY + ARFGVL + I W +
Sbjct: 325 HDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKEKM--ARFGVLSKQDLTGSDINWVD 382
Query: 122 LPNCYIFHNANAWE---EEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNM 178
+P+C+ FH NAWE EE D V+++ +P +F+ E+ E EL E+R NM
Sbjct: 383 VPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIFS----ESGEPTRVELSEIRLNM 438
Query: 179 KTGLASQKKLSPAC-VDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGK 237
+T +++K + ++ IN Y+GRK ++VY +I + K +G+ K D++
Sbjct: 439 RTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSGIAKVDIQ------- 491
Query: 238 TKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVID 297
G V F+ GP RFG E FVP EED GY++ V DE +S V+D
Sbjct: 492 -----NGTVSE-FNYGPSRFGGEPCFVPE---GEGEEDKGYVMGFVRDEEKDESEFVVVD 542
Query: 298 AKTMSADPVAVIELPHRVPYGFHGIFLSEEQLEE 331
A M VA + LP RVPYGFHG F+SE QL+E
Sbjct: 543 ATDMKQ--VAAVRLPERVPYGFHGTFVSENQLKE 574
>sp|Q9M6E8|NCED1_PHAVU 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus
vulgaris GN=NCED1 PE=2 SV=1
Length = 615
Score = 187 bits (476), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 175/336 (52%), Gaps = 29/336 (8%)
Query: 3 DYDKRLNHPFTAHPKIDPYTDEMFTFGY-TQTPPYVTYRVISKDGFMHDPVPITMSAPIM 61
D++ +LN AHPK+DP ++ Y PY+ Y S DG V I + P M
Sbjct: 304 DFNGQLNSTMIAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVEIPLKEPTM 363
Query: 62 MHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWFE 121
MHDFAITEN+ + D + F+ EM+ + +D +RFG+L + A+D +RW +
Sbjct: 364 MHDFAITENFVVVPDQQVVFKLTEMITGGSPV-VYDKNKTSRFGILDKNAKDANAMRWID 422
Query: 122 LPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTG 181
P C+ FH NAWEE E + +++ P +FN E E + L E+R N++TG
Sbjct: 423 APECFCFHLWNAWEEPETDEIVVIGSCMTPADSIFN----ECDESLKSVLSEIRLNLRTG 478
Query: 182 LASQKKL----SPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGK 237
++++ + ++ +N + +GRK ++ Y ++ E KV+G K DL
Sbjct: 479 KSTRRPIISDAEQVNLEAGMVNRNKLGRKTQFAYLALAEPWPKVSGFAKVDL-------- 530
Query: 238 TKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVID 297
G V+ + G +FG E +F+P + EE DGY++ VHDE KS + +++
Sbjct: 531 ----FSGEVQK-YMYGEEKFGGEPLFLP----NGEEEGDGYILAFVHDEKEWKSELQIVN 581
Query: 298 AKTMSADPVAVIELPHRVPYGFHGIFLSEEQLEELA 333
A+ + + A I+LP RVPYGFHG F+ + L + A
Sbjct: 582 AQNLKLE--ASIKLPSRVPYGFHGTFIHSKDLRKQA 615
>sp|O49505|NCED2_ARATH 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1
Length = 583
Score = 181 bits (459), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 167/332 (50%), Gaps = 25/332 (7%)
Query: 3 DYDKRLNHPFTAHPKIDPYTDEMFTFGY-TQTPPYVTYRVISKDGFMHDPVPITMSAPIM 61
D+D +L AHPK+DP T E+ Y PY+ Y S DG + I + P M
Sbjct: 268 DFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELEIPLETPTM 327
Query: 62 MHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIRWFE 121
+HDFAITEN+ + D + F+ EM+ K FD +R G++P+ A + QI W
Sbjct: 328 IHDFAITENFVVIPDQQVVFKLGEMI-SGKSPVVFDGEKVSRLGIMPKDATEASQIIWVN 386
Query: 122 LPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTG 181
P + FH NAWE E E +++ +P +FN E E + L E+R N++T
Sbjct: 387 SPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFN----ERDESLRSVLSEIRINLRTR 442
Query: 182 LASQKKL---SPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKT 238
+++ L ++ +N + +GRK R+ + +I KV+G K DL TG+
Sbjct: 443 KTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGFAKVDLC----TGEM 498
Query: 239 KLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSE-EDDGYLIFHVHDENTGKSAVYVID 297
K + G K +G E F+P + E EDDGY+ HVHDE T S + +I+
Sbjct: 499 KKYIYGGEK---------YGGEPFFLPGNSGNGEENEDDGYIFCHVHDEETKTSELQIIN 549
Query: 298 AKTMSADPVAVIELPHRVPYGFHGIFLSEEQL 329
A + + A I+LP RVPYGFHG F+ +L
Sbjct: 550 AVNLKLE--ATIKLPSRVPYGFHGTFVDSNEL 579
>sp|O06785|CCO_MYCTU Carotenoid cleavage oxygenase OS=Mycobacterium tuberculosis
GN=Rv0654 PE=1 SV=1
Length = 501
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 156/359 (43%), Gaps = 53/359 (14%)
Query: 3 DYDKRLNHPFTAHPKIDPYTDEMFTFGYTQTPPY-VTYRVISKDGFMHDPVPITMSAPIM 61
D+D L+ +TAHP+ DP+T E+ Y+ + V Y VI DG V I ++ M
Sbjct: 150 DFDGTLHGGYTAHPQRDPHTGELHAVSYSFARGHRVQYSVIGTDGHARRTVDIEVAGSPM 209
Query: 62 MHDFAITENYAIFLDLPMCFRQKEMV---------------------------------- 87
MH F++T+NY + DLP+ F ++V
Sbjct: 210 MHSFSLTDNYVVIYDLPVTFDPMQVVPASVPRWLQRPARLVIQSVLGRVRIPDPIAALGN 269
Query: 88 ----KENKLIYAFDPTIKARFGVLPRYARDDLQIRWFELPNCYIFHNANAWEEEEDEV-V 142
++L YA++P+ AR GV+PR ++ +RWF++ CY++H NA+ E + V
Sbjct: 270 RMQGHSDRLPYAWNPSYPARVGVMPREGGNE-DVRWFDIEPCYVYHPLNAYSECRNGAEV 328
Query: 143 LITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKKLSPACVDFPRINEHY 202
L+ VR MF+ + D L N+ TG + + +FPRINE
Sbjct: 329 LVLDVVRYS--RMFDRDRRGPGGDSRPSLDRWTINLATGAVTAECRDDRAQEFPRINETL 386
Query: 203 MGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGPGRFGSEAV 262
+G R+ Y + G A T K + + L P E V
Sbjct: 387 VGGPHRFAY------TVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLLIGEMV 440
Query: 263 FVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIELPHRVPYGFHG 321
FVP S EDDG L+ + + + ++DA+T+ + +A + LP RVP GFHG
Sbjct: 441 FVPN--PSARAEDDGILMGYGWHRGRDEGQLLLLDAQTLES--IATVHLPQRVPMGFHG 495
>sp|Q53353|LSDX1_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme I OS=Pseudomonas
paucimobilis PE=1 SV=1
Length = 485
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 146/349 (41%), Gaps = 35/349 (10%)
Query: 3 DYDKRL-NHPFTAHPKIDPYTDEMFTFGYTQTPPY---VTYRVISKDGFMHDPVPITMSA 58
++D +L + F AHPKIDP T + F Y + Y IS G + +P
Sbjct: 154 NFDGKLQSQTFCAHPKIDPVTGNLCAFAYGAKGLMTLDMAYIEISPTGKLLKEIPFQNPY 213
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIR 118
MMHDF +TE+YA+F +P+ + +++ + FD T+ G+LPR D +R
Sbjct: 214 YCMMHDFGVTEDYAVFAVMPL-LSSWDRLEQRLPFFGFDTTLPCYLGILPRNG-DARDLR 271
Query: 119 WFELPNCYIFHNANAWEEEEDEVVLITCRVRN--PDLDMFNGPLKETLEDQ--TTELYEM 174
WF+ NC++ H NA+ + + + N P D+ P T +M
Sbjct: 272 WFKTGNCFVGHVMNAFNDGTKVHIDMPVSRNNSFPFFDVHGAPFDPVAGQGFLTRWTVDM 331
Query: 175 RFNMKTGLASQKKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPE 234
N + ++L +FPRI+E Y R R+ + M+ D E
Sbjct: 332 ASNGDS-FEKTERLFDRPDEFPRIDERYATRAYRHGW------------MLILDTEKPYE 378
Query: 235 TGKTKLEVGGNVKGIFDLGPGRFGS----------EAVFVPREPSSTSEEDDGYLIFHVH 284
N G DL G+ S E F+PR P + E DGY+I V
Sbjct: 379 APGGAFYALTNTLGHIDLATGKSSSWWAGPRCAIQEPCFIPRSPDA--PEGDGYVIALVD 436
Query: 285 DENTGKSAVYVIDAKTMSADPVAVIELPHRVPYGFHGIFLSEEQLEELA 333
D S + + DA+ + P+A +LP R+ G HG + +L A
Sbjct: 437 DHVANYSDLAIFDAQHVDQGPIARAKLPVRIRQGLHGNWADASRLAVAA 485
>sp|P74334|ACOX_SYNY3 Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1541 PE=1 SV=1
Length = 490
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 52/339 (15%)
Query: 9 NHPFTAHPKIDPYTDEMFTFGYTQTPPYVTYRV------------ISKDGFMHDPVPITM 56
P +AHP+IDP + TF Q P YVT+ + + G + T
Sbjct: 177 GQPLSAHPRIDPAS----TFDGGQ-PCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTETF 231
Query: 57 SAPIMMHDFAITENYAIFLD-------LPMCFRQKEMVKENKLIYAFDPTIKARFGVLPR 109
+HDFAIT +YAIFL LP F ++ F P A+ ++PR
Sbjct: 232 PGFAFIHDFAITPHYAIFLQNNVTLNGLPYLFG----LRGAGECVQFHPDKPAQIILVPR 287
Query: 110 YARDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTT 169
D +I+ + ++FH+ANA+EE ++ C P +D +G + T D
Sbjct: 288 ---DGGEIKRIPVQAGFVFHHANAFEENGKIILDSICYNSLPQVDT-DGDFRSTNFDNLD 343
Query: 170 ELYEMRFNMKTGLASQKK--LSPACVDFPRINEHYMGRKQRYVYGSILENI---AKVTGM 224
RF + A+ +K + C +FP ++ +GR RYVY + A + +
Sbjct: 344 PGQLWRFTIDPAAATVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAI 403
Query: 225 IKFDLRAEPETGKTKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVH 284
+K DL + ET ++ P F E +FVPR P +E DDG+L+ ++
Sbjct: 404 LKVDLESGTETLRS-------------FAPHGFAGEPIFVPR-PGGVAE-DDGWLLCLIY 448
Query: 285 DENTGKSAVYVIDAKTMSADPVAVIELPHRVPYGFHGIF 323
+ +S + ++DA+ ++A +A ++L H +PY HG +
Sbjct: 449 KADLHRSELVILDAQDITAPAIATLKLKHHIPYPLHGSW 487
>sp|Q52008|LSDX3_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme III OS=Pseudomonas
paucimobilis GN=lsdB PE=1 SV=1
Length = 490
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 26/343 (7%)
Query: 3 DYDKRL-NHPFTAHPKIDPYTDEMFTFGYTQTPPYVT---YRVISKDGFMHDPVPITMSA 58
++D +L N F+AH KIDP T FGY T T Y I G + +
Sbjct: 154 NFDGKLKNQTFSAHAKIDPVTGNFCNFGYAATGLLTTDCSYFEIDPAGNLLFETEFQVPY 213
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRY-ARDDLQI 117
MMHD+ +TE+YAIF +P C + +K + FD T+ GV+PR + +
Sbjct: 214 YCMMHDYGLTEHYAIFHIVP-CSPNWDRLKAGLPHFGFDTTLPVWLGVVPRGPGVTNKDV 272
Query: 118 RWFELPNC-YIFHNANAWEEEEDEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRF 176
RWF+ P + H NA+EE ++ T + N F + Y R+
Sbjct: 273 RWFKAPKTIFASHVMNAFEEGS-KIHFDTPQAENNAFPFFPDIHGAPFDPVAARPYLHRW 331
Query: 177 NMKTGLASQ-----KKLSPACVDFPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRA 231
+ G S+ ++L+ +FPR++ Y+G+ R+ +G +++ ++ +
Sbjct: 332 TVDLGSNSEDFAEVRQLTSWIDEFPRVDARYVGQPYRHGWGLVMDP------EMEMEFAR 385
Query: 232 EPETGKTKLEVG--GNVKGIFD---LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDE 286
+G +G + G D GP E FVPR + S E DGY+I V +
Sbjct: 386 GRASGFKMNRIGHWDHATGKEDSWWCGPQSIIQEPCFVPR--MADSAEGDGYIIALVDNL 443
Query: 287 NTGKSAVYVIDAKTMSADPVAVIELPHRVPYGFHGIFLSEEQL 329
T S + V+DA + P+ +LP R+ G HG + +L
Sbjct: 444 ITNYSDLVVLDALNLKDGPIGRAKLPIRLRSGLHGNWADASKL 486
>sp|Q8VY26|CCD8_ARATH Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidopsis
thaliana GN=CCD8 PE=1 SV=1
Length = 570
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 43/292 (14%)
Query: 58 APIMMHDFAITENYAIFLDLPMCFRQKEMVK-ENKLIYAFD--PTIKARFGVLPRYARDD 114
P +H FA+TENY + ++P+ + K +++ E +Y F+ P A V+ + +
Sbjct: 300 GPGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTPLYKFEWCPQDGAFIHVMSKLTGE- 358
Query: 115 LQIRWFELPNCYIFHNANAWEEEED-----EVVLITCRVRNPDLDMFNGPLKETLE---- 165
+ E+P FH NA+EE+++ V++ C N D + + +TL
Sbjct: 359 -VVASVEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLRLDTLRSSHG 417
Query: 166 -DQTTELYEMRFNMKTGLASQKKLSPA--------CVDFPRINEHYMGRKQRYVYGSILE 216
D + RF + + KL A +D IN Y+G+K RYVY +
Sbjct: 418 HDVLPDARIGRFRIPLDGSKYGKLETAVEAEKHGRAMDMCSINPLYLGQKYRYVYACGAQ 477
Query: 217 NIAKV-TGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGPGRFGSEAVFVPREPSSTSEED 275
+ K D+ V VK + G SE FVPR P +T ED
Sbjct: 478 RPCNFPNALSKVDI------------VEKKVKNWHE--HGMIPSEPFFVPR-PGAT-HED 521
Query: 276 DGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIELPHRVPYGFHGIFLSEE 327
DG +I V +EN G A+ ++D S + +A + P+ +PYG HG ++ ++
Sbjct: 522 DGVVISIVSEENGGSFAI-LLDGS--SFEEIARAKFPYGLPYGLHGCWIPKD 570
>sp|Q99NF1|BCDO2_MOUSE Beta,beta-carotene 9',10'-oxygenase OS=Mus musculus GN=Bco2 PE=1
SV=1
Length = 532
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 151/375 (40%), Gaps = 84/375 (22%)
Query: 13 TAHPKIDPYTDEMFTFGYTQTPPYVTYRVISKDGFMHDPVPITMSAPIMM---------- 62
TAHP DP + G + P Y +I +P A ++
Sbjct: 177 TAHPHYDP-DGTAYNMGNSYGPRGSCYNIIRVPPKKKEPGETIHGAQVLCSIASTEKMKP 235
Query: 63 ---HDFAITENYAIFLDLPMCFRQKEMV------KENKLIYAFDPTIKARFGVLPRYARD 113
H F +T+NY IF++ P+ + +++ K +++P RF V+ ++
Sbjct: 236 SYYHSFGMTKNYIIFVEQPVKMKLWKIITSKIRGKPFADGISWEPQYNTRFHVVDKHTGQ 295
Query: 114 DLQIRWFELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFN-GPLKETLE--DQTTE 170
L ++ +P +H NA+E++ V+ + C+ LD++ L++ E DQ E
Sbjct: 296 LLPGMYYSMP-FLTYHQINAFEDQGCIVIDLCCQDDGRSLDLYQLQNLRKAGEGLDQVYE 354
Query: 171 LYEMRF--------NMKTGLASQKKLSP-------------------------------A 191
L F ++ A K LSP
Sbjct: 355 LKAKSFPRRFVLPLDVSVDAAEGKNLSPLSYSSASAVKQGDGEIWCSPENLHHEDLEEEG 414
Query: 192 CVDFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIF 250
++FP+IN + G+K + YG ++ + +IK D+ T KT L V
Sbjct: 415 GIEFPQINYGRFNGKKYSFFYGCGFRHLVGDS-LIKVDV-----TNKT-LRVWRE----- 462
Query: 251 DLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAVI 309
G + SE VFVP EED G ++ V N +S + V+DAK+ + +
Sbjct: 463 ---EGFYPSEPVFVPV--PGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTE--LGRA 515
Query: 310 ELPHRVPYGFHGIFL 324
E+P ++PYGFHG F+
Sbjct: 516 EVPVQMPYGFHGTFV 530
>sp|Q8HXG8|BCDO2_MACFA Beta,beta-carotene 9',10'-oxygenase OS=Macaca fascicularis GN=BCO2
PE=2 SV=2
Length = 556
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 144/375 (38%), Gaps = 84/375 (22%)
Query: 13 TAHPKIDPYTDEMFTFGYTQTPPYVTYRVIS-------------KDGFMHDPVPITMSAP 59
TAHP DP + G + P +Y+VI + P P
Sbjct: 201 TAHPHYDP-DGTAYNMGNSFGPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKP 259
Query: 60 IMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAF------DPTIKARFGVLPRYARD 113
H F +T NY IF++ P+ ++ AF +P RF V+ ++
Sbjct: 260 SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVDKHTGQ 319
Query: 114 DLQIRWFELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFN-------GPLKETLED 166
L R++ P FH+ NA+E++ ++ + C+ L+++ G + + +
Sbjct: 320 LLPGRYYSKP-FVAFHHINAFEDQGCVIIDLCCQDNGRILEVYQLQNLRKAGEELDQVYN 378
Query: 167 QTTELYEMRF----NMKTGLASQKKLSP-------------------------------A 191
+ RF N+ LSP
Sbjct: 379 SAGRSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEG 438
Query: 192 CVDFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIF 250
++FP+I + G+K R+ YG ++ + +IK D+ + T K E
Sbjct: 439 GIEFPQIYYGQFSGKKYRFFYGCGFRHLVGDS-LIKVDVVNK--TLKVWRE--------- 486
Query: 251 DLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAVI 309
G + SE VFVP T+EED G ++ V N +S + V+DAK + +
Sbjct: 487 ---DGFYPSEPVFVPV--PGTNEEDGGVILSVVITPNQNESNFLLVLDAKNF--EELGRA 539
Query: 310 ELPHRVPYGFHGIFL 324
E+P ++PYGFHG F+
Sbjct: 540 EVPVQMPYGFHGTFI 554
>sp|Q5RF16|BCDO2_PONAB Beta,beta-carotene 9',10'-oxygenase OS=Pongo abelii GN=BCO2 PE=2
SV=1
Length = 557
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 142/375 (37%), Gaps = 83/375 (22%)
Query: 13 TAHPKIDPYTDEMFTFGYTQTPPYVTYRVISK-------DGFMHDPVPITMSA------P 59
TAHP DP + G + P +Y+VI +H I A P
Sbjct: 201 TAHPHYDP-DGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGAQVICSIASTEKGKP 259
Query: 60 IMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAF------DPTIKARFGVLPRYARD 113
H F +T NY IF++ P+ ++ AF +P F V+ +
Sbjct: 260 SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTWFHVVDKRTGQ 319
Query: 114 DLQIRWFELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFN-------GPLKETLED 166
L R++ P FH NA+E++ ++ + C+ L+++ G + + +
Sbjct: 320 LLPGRYYSKP-FVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVYN 378
Query: 167 QTTELYEMRF----NMKTGLASQKKLSP-------------------------------A 191
+ + RF N+ LSP
Sbjct: 379 SAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEG 438
Query: 192 CVDFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIF 250
++FP+I + + G+K + YG ++ +IK D+ + T K E
Sbjct: 439 GIEFPQIYYDQFSGKKYHFFYGCGFRHLVGGDSLIKVDVVNK--TLKVWRE--------- 487
Query: 251 DLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAVI 309
G + SE VFVP T+EED G ++ V N +S + V+DAK +
Sbjct: 488 ---DGFYPSEPVFVP--APGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFGE--LGRA 540
Query: 310 ELPHRVPYGFHGIFL 324
E+P ++PYGFHG F+
Sbjct: 541 EVPVQMPYGFHGTFI 555
>sp|Q9BYV7|BCDO2_HUMAN Beta,beta-carotene 9',10'-oxygenase OS=Homo sapiens GN=BCO2 PE=1
SV=5
Length = 579
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 70/316 (22%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAF------DPTIKARFGVLPRYAR 112
P H F +T NY IF++ P+ ++ AF +P RF V+ +
Sbjct: 282 PSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTG 341
Query: 113 DDLQIRWFELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMFN-------GPLKETLE 165
L R++ P FH NA+E++ ++ + C+ L+++ G + +
Sbjct: 342 QLLPGRYYSKP-FVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVH 400
Query: 166 DQTTELYEMRF----NMKTGLASQKKLSP------------------------------- 190
+ + + RF N+ LSP
Sbjct: 401 NSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKE 460
Query: 191 ACVDFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGI 249
++FP+I + + G+K + YG ++ + +IK D+ + T K E
Sbjct: 461 GGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDS-LIKVDVVNK--TLKVWRE-------- 509
Query: 250 FDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAV 308
G + SE VFVP T+EED G ++ V N +S + V+DAK + +
Sbjct: 510 ----DGFYPSEPVFVP--APGTNEEDGGVILSVVITPNQNESNFILVLDAKNF--EELGR 561
Query: 309 IELPHRVPYGFHGIFL 324
E+P ++PYGFHG F+
Sbjct: 562 AEVPVQMPYGFHGTFI 577
>sp|Q7XJM2|CCD7_ARATH Carotenoid cleavage dioxygenase 7, chloroplastic OS=Arabidopsis
thaliana GN=CCD7 PE=1 SV=1
Length = 618
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 50/310 (16%)
Query: 60 IMMHDFAITENYAIF----LDLPMCFRQKEMVKENKLIYAF--DPTIKAR-FGVLPR--- 109
+M+HD+A T+ + I + L M + ++ A +P+ ++ +LPR
Sbjct: 316 MMIHDWAFTDTHYILFANRVKLNPIGSIAAMCGMSPMVSALSLNPSNESSPIYILPRFSD 375
Query: 110 -YARD--DLQIRWFELPNCYIFHNANAWEEEED------EVVLITCRVRNPDLDMFNG-- 158
Y+R D ++ ++ H+ NA+E ED ++ C R D G
Sbjct: 376 KYSRGGRDWRVPVEVSSQLWLIHSGNAYETREDNGDLKIQIQASACSYRWFDFQKMFGYD 435
Query: 159 -------PLKETLEDQTTELYEMRFNMKTGLASQKKLSPACV----------DFPRINEH 201
P L +L + L S + V DFP IN
Sbjct: 436 WQSNKLDPSVMNLNRGDDKLLPHLVKVSMTLDSTGNCNSCDVEPLNGWNKPSDFPVINSS 495
Query: 202 YMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGPGRFGSEA 261
+ G+K +Y+Y + FD+ K ++ N+ + G RF E
Sbjct: 496 WSGKKNKYMYSAASSGTRSELPHFPFDM-------VVKFDLDSNLVRTWSTGARRFVGEP 548
Query: 262 VFVPREP-SSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTM--SADPVAVIELPHRV--P 316
+FVP+ EEDDGY++ + + + + ++DAK + S V+ +E+P + P
Sbjct: 549 MFVPKNSVEEGEEEDDGYIVVVEYAVSVERCYLVILDAKKIGESDAVVSRLEVPRNLTFP 608
Query: 317 YGFHGIFLSE 326
GFHG++ S+
Sbjct: 609 MGFHGLWASD 618
>sp|Q9HAY6|BCDO1_HUMAN Beta,beta-carotene 15,15'-monooxygenase OS=Homo sapiens GN=BCMO1
PE=1 SV=1
Length = 547
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 128/313 (40%), Gaps = 62/313 (19%)
Query: 55 TMSAPIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLI--------YAFDPTIKARFGV 106
++ +P H F +TENY IFL+ P FR + I AF K +
Sbjct: 229 SLLSPSYYHSFGVTENYVIFLEQP--FRLDILKMATAYIRRMSWASCLAFHREEKTYIHI 286
Query: 107 LPRYARDDLQIRWFELPNCYIFHNANAWEEE----------EDEVVLITCRVRN------ 150
+ + R +Q + F +FH+ NA+EE+ ED + + N
Sbjct: 287 IDQRTRQPVQTK-FYTDAMVVFHHVNAYEEDGCIVFDVIAYEDNSLYQLFYLANLNQDFK 345
Query: 151 --------PDLDMFNGPLK-ETLEDQTTELYEMRFNMKTGLA-------SQKKLSPACVD 194
P L F PL + + T L ++ T L Q + ++
Sbjct: 346 ENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATALKEEDGQVYCQPEFLYEGLE 405
Query: 195 FPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGP 254
PR+N + G++ RYV+ + ++ T +IK+D+ K+ L+ + D P
Sbjct: 406 LPRVNYAHNGKQYRYVFATGVQWSPIPTKIIKYDILT-----KSSLKWRED-----DCWP 455
Query: 255 GRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAVIELPH 313
+E +FVP +EDDG ++ + + K + ++DAK+ + A +++
Sbjct: 456 ----AEPLFVP--APGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTELARASVDVDM 509
Query: 314 RVPYGFHGIFLSE 326
+ HG+F+++
Sbjct: 510 HM--DLHGLFITD 520
>sp|Q9I993|BCDO1_CHICK Beta,beta-carotene 15,15'-monooxygenase OS=Gallus gallus GN=BCMO1
PE=1 SV=1
Length = 526
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 119/316 (37%), Gaps = 63/316 (19%)
Query: 55 TMSAPIMMHDFAITENYAIFLDLPMCFRQKEMVK---------ENKLIYAFDPTIKARFG 105
++ P H F ITENY +F++ P + ++VK +F K F
Sbjct: 228 SLLQPSYYHSFGITENYIVFIEQPF---KLDIVKLATAYIRGVNWASCLSFHKEDKTWFH 284
Query: 106 VLPRYARDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITCRVRNPDLDMF--------- 156
+ R + ++ + F ++H+ NA+EE+ V I N DMF
Sbjct: 285 FVDRKTKKEVSTK-FYTDALVLYHHINAYEEDGHVVFDIVAYRDNSLYDMFYLKKLDKDF 343
Query: 157 --NGPLKET----------LEDQTTELYEMRFNMKTGLAS--QKKLSPAC--------VD 194
N L D+ E+ + T + +K S C ++
Sbjct: 344 EVNNKLTSIPTCKRFVVPLQYDKDAEVGSNLVKLPTSATAVKEKDGSIYCQPEILCEGIE 403
Query: 195 FPRINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGP 254
PR+N Y G+K +YVY + ++ T + K +++ K + G
Sbjct: 404 LPRVNYDYNGKKYKYVYATEVQWSPVPTKIAKLNVQT---------------KEVLHWGE 448
Query: 255 GR-FGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIELPH 313
+ SE +FVP P + E++ L V E + ++DAKT A + +
Sbjct: 449 DHCWPSEPIFVP-SPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRATVNVEM 507
Query: 314 RVPYGFHGIFLSEEQL 329
+ HG+F+ + L
Sbjct: 508 HL--DLHGMFIPQNDL 521
>sp|Q9JJS6|BCDO1_MOUSE Beta,beta-carotene 15,15'-monooxygenase OS=Mus musculus GN=Bcmo1
PE=1 SV=2
Length = 566
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 58/309 (18%)
Query: 55 TMSAPIMMHDFAITENYAIFLDLPMCFRQKEMVK------ENKLIYAFDPTIKARFGVLP 108
++ +P H F +TENY +FL+ P +M +FD K ++
Sbjct: 229 SLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMSFDREDKTYIHIID 288
Query: 109 RYARDDLQIRWFELPNCYIFHNANAWEEE----------EDEVVLITCRVRN-------- 150
+ R + +++ P +FH+ NA+EE+ ED + + N
Sbjct: 289 QRTRKPVPTKFYTDP-MVVFHHVNAYEEDGCVLFDVIAYEDSSLYQLFYLANLNKDFEEK 347
Query: 151 ------PDLDMFNGPLKETLEDQT-TELYEMRFNMKTGLA-------SQKKLSPACVDFP 196
P L F PL + + + L ++ T L Q ++ ++ P
Sbjct: 348 SRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVYCQPEVLYEGLELP 407
Query: 197 RINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGPGR 256
RIN Y G+ RY++ + ++ T ++K+D+ K+ L+
Sbjct: 408 RINYAYNGKPYRYIFAAEVQWSPVPTKILKYDILT-----KSSLKWSEE---------SC 453
Query: 257 FGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAVIELPHRV 315
+ +E +FVP +EDDG ++ + + K + ++DAK+ + A ++ +
Sbjct: 454 WPAEPLFVPT--PGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTELARASVDADMHL 511
Query: 316 PYGFHGIFL 324
HG+F+
Sbjct: 512 --DLHGLFI 518
>sp|Q91XT5|BCDO1_RAT Beta,beta-carotene 15,15'-monooxygenase OS=Rattus norvegicus
GN=Bcmo1 PE=2 SV=1
Length = 566
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 123/309 (39%), Gaps = 58/309 (18%)
Query: 55 TMSAPIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTI------KARFGVLP 108
++ +P H F +TENY +FL+ P +M ++ + K ++
Sbjct: 229 SLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMTFCKEDKTYIHIID 288
Query: 109 RYARDDLQIRWFELPNCYIFHNANAWEEE----------EDEVVLITCRVRN-------- 150
+ R + +++ P +FH+ NA+EE+ ED + + N
Sbjct: 289 QKTRKPVPTKFYTDP-MVVFHHVNAYEEDGCVLFDVIAYEDNSLYQLFYLANLNKDFEEK 347
Query: 151 ------PDLDMFNGPLKETLEDQT-TELYEMRFNMKTGLA-------SQKKLSPACVDFP 196
P L F PL + + + L ++ T L Q ++ ++ P
Sbjct: 348 SRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQPEVLYEGLELP 407
Query: 197 RINEHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFDLGPGR 256
RIN + G+ RY++ + ++ T ++K+D+ + ++
Sbjct: 408 RINYAHNGKPYRYIFAAEVQWSPVPTKILKYDVLTKSSLKWSEESC-------------- 453
Query: 257 FGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSA-VYVIDAKTMSADPVAVIELPHRV 315
+ +E +FVP +EDDG ++ + + K + ++DAK+ + A +++ +
Sbjct: 454 WPAEPLFVPT--PGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTELARASVDVDMHL 511
Query: 316 PYGFHGIFL 324
HG+F+
Sbjct: 512 --DLHGLFI 518
>sp|A9C3R8|RP65C_DANRE Retinal Mueller cells isomerohydrolase OS=Danio rerio GN=rpe65c
PE=1 SV=1
Length = 532
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 113/320 (35%), Gaps = 81/320 (25%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIR 118
P +H F ITEN+ +F++ P VK N L + +I+ + + +D
Sbjct: 237 PSYVHSFGITENHFVFVETP--------VKINLLKFLTSWSIRGS-NYMDCFESNDKMGT 287
Query: 119 WFEL----PNCYI-----------FHNANAWEEEE------------------------- 138
WF L P YI FH+ N +E++
Sbjct: 288 WFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQGFIVVDLCTWKGHEFVYNYLYLANLR 347
Query: 139 ---DEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPAC 192
+EV R P++ + PL E+Q L + + T + L P
Sbjct: 348 QNWEEVKKAALRAPQPEVRRYVLPLDIHREEQGKNLVSLPYTTATAVMRSDGTVWLEPEV 407
Query: 193 V--------DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVG 243
+ +FP+IN + G+ + YG L + P+ KL V
Sbjct: 408 LFSGPRQAFEFPQINYSKFNGKDYTFAYGLGLNHFV-------------PDR-ICKLNVK 453
Query: 244 GNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSA 303
I+ P + SE +FV + +EDDG L+ V + +++ K
Sbjct: 454 SKETWIWQ-EPDAYPSEPLFV--QSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDL 510
Query: 304 DPVAVIELPHRVPYGFHGIF 323
+A E+ +P HGI+
Sbjct: 511 TEIARAEVDVLIPVTLHGIY 530
>sp|A9C3R9|RP65B_DANRE All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rerio
GN=rpe65b PE=1 SV=1
Length = 532
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 113/320 (35%), Gaps = 81/320 (25%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKLIYAFDPTIKARFGVLPRYARDDLQIR 118
P +H F +TEN+ +F++ P VK N L + +I+ + + +D
Sbjct: 237 PSYVHSFGMTENHFVFVETP--------VKINLLKFLTSWSIRGS-NYMDCFESNDRMGT 287
Query: 119 WFEL----PNCYI-----------FHNANAWEEEE------------------------- 138
WF L P YI FH+ N +E++
Sbjct: 288 WFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQGFIVVDLCTWKGHEFVYNYLYLANLR 347
Query: 139 ---DEVVLITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPAC 192
+EV R P++ + PL E+Q L + + T + L P
Sbjct: 348 QNWEEVKKAALRAPQPEVRRYVLPLDIHREEQGKNLVSLPYTTATAVMCSDGTVWLEPEV 407
Query: 193 V--------DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVG 243
+ +FP+IN + G+ + YG L + P+ KL V
Sbjct: 408 LFSGPRQAFEFPQINYSKFNGKDYTFAYGLGLNHFV-------------PDR-ICKLNVK 453
Query: 244 GNVKGIFDLGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSA 303
I+ P + SE +FV + +EDDG L+ V + +++ K
Sbjct: 454 SKETWIWQ-EPDAYPSEPLFV--QSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDL 510
Query: 304 DPVAVIELPHRVPYGFHGIF 323
+A E+ +P HGI+
Sbjct: 511 TEIARAEVDVLIPLTLHGIY 530
>sp|Q28175|RPE65_BOVIN Retinoid isomerohydrolase OS=Bos taurus GN=RPE65 PE=1 SV=3
Length = 533
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 114/312 (36%), Gaps = 65/312 (20%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + L + + T+ + +
Sbjct: 237 PSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKR 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITC------------------------- 146
+ + ++ P +FH+ N +E+ E +V + C
Sbjct: 297 KKYINNKYRTSP-FNLFHHINTYEDHEFLIVDLCCWKGFEFVYNYSYLANLRENWEEVKK 355
Query: 147 ---RVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPACV------- 193
+ P++ + PL D L + T + + L P +
Sbjct: 356 NARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQA 415
Query: 194 -DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + Y G+ Y YG L + + K +++ + ET +
Sbjct: 416 FEFPQINYQKYGGKPYTYAYGLGLNHFVP-DRLCKLNVKTK-ETWVWQ------------ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIEL 311
P + SE +FV P + EEDDG ++ V G+ Y++ VA E+
Sbjct: 462 -EPDSYPSEPIFV-SHPDAL-EEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEV 518
Query: 312 PHRVPYGFHGIF 323
+P FHG+F
Sbjct: 519 EINIPVTFHGLF 530
>sp|Q9XT71|RPE65_CHLAE Retinoid isomerohydrolase OS=Chlorocebus aethiops GN=RPE65 PE=2
SV=3
Length = 533
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 114/312 (36%), Gaps = 65/312 (20%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + L + + T+ + +
Sbjct: 237 PSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKR 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITC------------------------- 146
+ L ++ P +FH+ N +E+ +V + C
Sbjct: 297 KKYLNNKYRTSP-FNLFHHINTYEDNGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKK 355
Query: 147 ---RVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPACV------- 193
+ P++ + PL D L + T + ++ L P +
Sbjct: 356 NARKAPQPEVRRYVLPLNIDKADTGKNLITLPNTTATAILCSEETIWLEPEVLFSGPRQA 415
Query: 194 -DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + Y G+ Y YG L + + K +++ + ET +
Sbjct: 416 FEFPQINYQKYCGKPYTYAYGLGLNHFVP-DRLCKLNVKTK-ETWVWQ------------ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIEL 311
P + SE +FV P + EEDDG ++ V G+ Y++ VA E+
Sbjct: 462 -EPDSYPSEPIFV-SHPDAL-EEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEV 518
Query: 312 PHRVPYGFHGIF 323
+P FHG+F
Sbjct: 519 EINIPVTFHGLF 530
>sp|Q16518|RPE65_HUMAN Retinoid isomerohydrolase OS=Homo sapiens GN=RPE65 PE=1 SV=3
Length = 533
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 113/312 (36%), Gaps = 65/312 (20%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + L + + T+ + +
Sbjct: 237 PSYVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKR 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITC------------------------- 146
+ L ++ P +FH+ N +E+ +V + C
Sbjct: 297 KKYLNNKYRTSP-FNLFHHINTYEDNGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKK 355
Query: 147 ---RVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPACV------- 193
+ P++ + PL D L + T + + L P +
Sbjct: 356 NARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQA 415
Query: 194 -DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + Y G+ Y YG L + + K +++ + ET +
Sbjct: 416 FEFPQINYQKYCGKPYTYAYGLGLNHFVP-DRLCKLNVKTK-ETWVWQ------------ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIEL 311
P + SE +FV P + EEDDG ++ V G+ Y++ VA E+
Sbjct: 462 -EPDSYPSEPIFV-SHPDAL-EEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEV 518
Query: 312 PHRVPYGFHGIF 323
+P FHG+F
Sbjct: 519 EINIPVTFHGLF 530
>sp|Q9YGX2|RPE65_CHICK Retinoid isomerohydrolase OS=Gallus gallus GN=RPE65 PE=1 SV=1
Length = 533
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 114/314 (36%), Gaps = 69/314 (21%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + L + + T+ V +
Sbjct: 237 PSYVHSFGLTPNYIVFVETPVKINLLKFLSSWSLWGANYMDCFESNETMGVWLHVAEKKK 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEE----------------------------EDEVVL 143
L I+ + +FH+ N +E+ DEV
Sbjct: 297 GRLLNIK-YRTSAFNLFHHINTFEDNGFLIVDLCTWKGFEFVYNYLYLANLRANWDEVKK 355
Query: 144 ITCRVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPACV------- 193
+ P+ + PL+ D L + + T + L P +
Sbjct: 356 QAEKAPQPEARRYVLPLRIDKADTGKNLVTLPYTTATATLRSDETVWLEPEVIFSGPRHA 415
Query: 194 -DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + Y G+ Y YG L + P+ KL V ++
Sbjct: 416 FEFPQINYKKYGGKPYTYTYGLGLNHFV-------------PDR-LCKLNVKTKETWVWQ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVY--VIDAKTMSADPVAVI 309
P + SE +FV P + EEDDG ++ V +G Y +++AK MS VA
Sbjct: 462 -EPDSYPSEPIFV-SHPDAL-EEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE--VARA 516
Query: 310 ELPHRVPYGFHGIF 323
E+ +P FHG+F
Sbjct: 517 EVEVNIPVTFHGLF 530
>sp|Q9YI25|RPE65_AMBTI Retinoid isomerohydrolase OS=Ambystoma tigrinum GN=RPE65 PE=2 SV=3
Length = 533
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 119/314 (37%), Gaps = 69/314 (21%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + + + T+ V ++
Sbjct: 237 PSYVHSFGLTPNYIVFVEQPVKINLFKFLSSWSIWGANYMDCFESHETMGVWMHVAEKHT 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITC------------------------- 146
+ L I+ + +FH+ N +E+ +V + C
Sbjct: 297 GEYLNIK-YRTSAFNLFHHINTYEDHGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKR 355
Query: 147 ---RVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPACV------- 193
+ P++ + PL D L + + T + + L P +
Sbjct: 356 SAEKPPQPEVRRYVLPLDIHKVDTGKNLVNLPYTTATAVLRSDETIWLEPEVLFSGPRQA 415
Query: 194 -DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + + G+ Y YG L + P+ +KL V ++
Sbjct: 416 FEFPQINYKKHGGKDYTYAYGVGLNHFV-------------PDR-LSKLNVKTKETWVWQ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVY--VIDAKTMSADPVAVI 309
P + SE +FV +P + EEDDG ++ V G+ + +++AK MS +A
Sbjct: 462 -EPDTYPSEPIFV-SQPDAI-EEDDGVVLSVVISPGEGQKPAFLLILNAKDMSE--IARA 516
Query: 310 ELPHRVPYGFHGIF 323
E+ +P FHG+F
Sbjct: 517 EVDSNIPVTFHGMF 530
>sp|O70276|RPE65_RAT Retinoid isomerohydrolase OS=Rattus norvegicus GN=Rpe65 PE=2 SV=3
Length = 533
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 254 PGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVY--VIDAKTMSADPVAVIEL 311
P + SE +FV +P + EEDDG ++ V G+ Y V++AK +S +A E+
Sbjct: 463 PDSYPSEPIFV-SQPDAL-EEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSE--IARAEV 518
Query: 312 PHRVPYGFHGIF 323
+P FHG+F
Sbjct: 519 ETNIPVTFHGLF 530
>sp|Q91ZQ5|RPE65_MOUSE Retinoid isomerohydrolase OS=Mus musculus GN=Rpe65 PE=1 SV=3
Length = 533
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 254 PGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVY--VIDAKTMSADPVAVIEL 311
P + SE +FV +P + EEDDG ++ V G+ Y V++AK +S +A E+
Sbjct: 463 PDSYPSEPIFV-SQPDAL-EEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSE--IARAEV 518
Query: 312 PHRVPYGFHGIF 323
+P FHG+F
Sbjct: 519 ETNIPVTFHGLF 530
>sp|Q9TVB8|RPE65_CANFA Retinoid isomerohydrolase OS=Canis familiaris GN=RPE65 PE=1 SV=3
Length = 533
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 113/312 (36%), Gaps = 65/312 (20%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + L + + T+ + +
Sbjct: 237 PSYVHSFGLTPNYIVFVETPVKINLLKFLSSWSLWGANYMDCFESNETMGVWLHIADKKR 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITC------------------------- 146
+ L + + + +FH+ N +E+ E +V + C
Sbjct: 297 KKYLNNK-YRTSSFNLFHHINTYEDNEFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKK 355
Query: 147 ---RVRNPDLDMFNGPLKETLED---------QTTELYEMRFNMKTGLASQKKLSP--AC 192
+ P++ + PL D TT +R + L + S
Sbjct: 356 NARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPRQA 415
Query: 193 VDFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + G+ Y YG L + + K +++ + ET +
Sbjct: 416 FEFPQINYQKSGGKPYTYAYGLGLNHFVP-DRLCKLNVKTK-ETWVWQ------------ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVYVIDAKTMSADPVAVIEL 311
P + SE +FV P + EEDDG ++ V G+ Y++ VA E+
Sbjct: 462 -EPDSYPSEPIFV-SHPDAL-EEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEV 518
Query: 312 PHRVPYGFHGIF 323
+P FHG+F
Sbjct: 519 EINIPVTFHGLF 530
>sp|Q9VZE6|BRX1_DROME Ribosome biogenesis protein BRX1 homolog OS=Drosophila melanogaster
GN=CG11583 PE=2 SV=2
Length = 359
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 15 HPKIDPYTDEMFTFGYTQTPPYV-TYRVISKDGFMHDPVPITMSAPIMMHDFAIT 68
HPK P+ D +FTF Y + ++++S+DG + + P + P+ + D + T
Sbjct: 187 HPKSQPFVDHVFTFTYLDKRIWFRNFQILSEDGGLSEVGPRYVMNPVKIFDGSFT 241
>sp|Q8AXN9|RPE65_CYNPY Retinoid isomerohydrolase OS=Cynops pyrrhogaster GN=RPE65 PE=2 SV=3
Length = 533
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 119/314 (37%), Gaps = 69/314 (21%)
Query: 59 PIMMHDFAITENYAIFLDLPMCFRQKEMVKENKL-------IYAFDPTIKARFGVLPRYA 111
P +H F +T NY +F++ P+ + + + + T+ V +
Sbjct: 237 PSYVHSFGLTPNYIVFVEQPVKINLFKFLSSWSIWGANYMDCFESHETMGVWMHVAEKLT 296
Query: 112 RDDLQIRWFELPNCYIFHNANAWEEEEDEVVLITC------------------------- 146
+ L I+ + +FH+ N +E+ +V + C
Sbjct: 297 GEYLNIK-YRTSAFNLFHHINTYEDHGFLIVDLCCWKGFEFIYNYLYLANMRENWEEVKR 355
Query: 147 ---RVRNPDLDMFNGPLKETLEDQTTELYEMRFNMKTGLASQKK---LSPACV------- 193
+ P++ + PL D L + + T + + L P +
Sbjct: 356 NAEKAPQPEVRRYVLPLDIHKVDTGKNLVNLPYTTATAILRSDETIWLEPEVLFSGPRLA 415
Query: 194 -DFPRIN-EHYMGRKQRYVYGSILENIAKVTGMIKFDLRAEPETGKTKLEVGGNVKGIFD 251
+FP+IN + + G+ + YG L + P+ +KL V ++
Sbjct: 416 FEFPQINYKKFGGKDYTFAYGLGLNHFV-------------PDR-LSKLNVKTKEIWVWQ 461
Query: 252 LGPGRFGSEAVFVPREPSSTSEEDDGYLIFHVHDENTGKSAVY--VIDAKTMSADPVAVI 309
P + SE +FV +P + EEDDG ++ + + G+ + +++AK MS +A
Sbjct: 462 -EPDSYPSEPIFV-SQPDAM-EEDDGVVLSVIVNPGPGQKPAFLLILNAKDMSE--IARA 516
Query: 310 ELPHRVPYGFHGIF 323
E+ +P FHG++
Sbjct: 517 EVDINIPVTFHGMY 530
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,796,545
Number of Sequences: 539616
Number of extensions: 5953455
Number of successful extensions: 11229
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 11090
Number of HSP's gapped (non-prelim): 63
length of query: 335
length of database: 191,569,459
effective HSP length: 118
effective length of query: 217
effective length of database: 127,894,771
effective search space: 27753165307
effective search space used: 27753165307
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)