Your job contains 1 sequence.
>019840
MAYNDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASN
DNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKY
SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV
SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE
LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLF
NSICTLNSYLVLNVVAGGRQGKIGAGNGLAIKANK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019840
(335 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184911 - symbol:KNAT4 "KNOTTED1-like homeobox... 890 3.6e-89 1
TAIR|locus:2146945 - symbol:KNAT3 "KNOTTED1-like homeobox... 890 3.6e-89 1
TAIR|locus:2116632 - symbol:KNAT5 "KNOTTED1-like homeobox... 824 3.6e-82 1
TAIR|locus:2015554 - symbol:KNAT7 "KNOTTED-like homeobox ... 682 4.0e-67 1
TAIR|locus:2128828 - symbol:KNAT1 "KNOTTED-like from Arab... 131 9.4e-15 2
TAIR|locus:2027089 - symbol:STM "SHOOT MERISTEMLESS" spec... 127 1.9e-14 2
TAIR|locus:2026810 - symbol:KNAT2 "KNOTTED-like from Arab... 114 2.3e-11 2
UNIPROTKB|P46609 - symbol:OSH1 "Homeobox protein knotted-... 137 1.2e-06 1
>TAIR|locus:2184911 [details] [associations]
symbol:KNAT4 "KNOTTED1-like homeobox gene 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0048513
"organ development" evidence=RCA] [GO:0009416 "response to light
stimulus" evidence=IEP] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 Pfam:PF03789 Pfam:PF03790 Pfam:PF03791
Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51213
SMART:SM00389 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009416 eggNOG:NOG302919
EMBL:AL391222 HOGENOM:HOG000272741 ProtClustDB:CLSN2686534
EMBL:X92393 EMBL:AK118296 IPI:IPI00548042 PIR:T51795
RefSeq:NP_196667.2 UniGene:At.5377 ProteinModelPortal:P48001
SMR:P48001 IntAct:P48001 STRING:P48001 PRIDE:P48001
EnsemblPlants:AT5G11060.1 GeneID:830973 KEGG:ath:AT5G11060
GeneFarm:4055 TAIR:At5g11060 InParanoid:P48001 OMA:GGEESMI
PhylomeDB:P48001 Genevestigator:P48001 Uniprot:P48001
Length = 393
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 174/226 (76%), Positives = 193/226 (85%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV- 123
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 115 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 174
Query: 124 -ANGRVL-DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
A G + DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 175 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 234
Query: 182 PGESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 235 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 291
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>TAIR|locus:2146945 [details] [associations]
symbol:KNAT3 "KNOTTED1-like homeobox gene 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009722 "detection of
cytokinin stimulus" evidence=IEP] [GO:0071345 "cellular response to
cytokine stimulus" evidence=IDA] [GO:0048513 "organ development"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 Pfam:PF03789 Pfam:PF03790 Pfam:PF03791
Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51213
SMART:SM00389 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009416 EMBL:AC006259
GO:GO:0071345 HOGENOM:HOG000272741 EMBL:X92392 EMBL:AY086091
EMBL:AY120762 EMBL:BT000139 IPI:IPI00547240 RefSeq:NP_197904.1
UniGene:At.5376 ProteinModelPortal:P48000 SMR:P48000 IntAct:P48000
STRING:P48000 PRIDE:P48000 EnsemblPlants:AT5G25220.1 GeneID:832593
KEGG:ath:AT5G25220 GeneFarm:4056 TAIR:At5g25220 eggNOG:NOG326768
InParanoid:P48000 OMA:GENKNDG PhylomeDB:P48000
ProtClustDB:CLSN2686534 Genevestigator:P48000 GO:GO:0009722
Uniprot:P48000
Length = 431
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 174/223 (78%), Positives = 190/223 (85%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 154 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 213
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 214 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 273
Query: 185 STGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMS N FDG LD +GFGPL+PTESERSLMERVR ELKHELKQG
Sbjct: 274 GMGATMSDDEDEQVESDANMFDGGLD---VLGFGPLIPTESERSLMERVRQELKHELKQG 330
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 331 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>TAIR|locus:2116632 [details] [associations]
symbol:KNAT5 "KNOTTED1-like homeobox gene 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009727 "detection of ethylene stimulus" evidence=IEP]
[GO:0071369 "cellular response to ethylene stimulus" evidence=IDA]
[GO:0048513 "organ development" evidence=RCA] InterPro:IPR001356
InterPro:IPR005539 InterPro:IPR005540 InterPro:IPR005541
InterPro:IPR008422 InterPro:IPR009057 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009727 EMBL:AL021636
EMBL:AL161580 GO:GO:0071369 HOGENOM:HOG000272741 EMBL:AF306661
EMBL:D43962 EMBL:BT026033 EMBL:X92394 IPI:IPI00534782 PIR:T04641
RefSeq:NP_194932.1 UniGene:At.20704 ProteinModelPortal:P48002
SMR:P48002 IntAct:P48002 STRING:P48002 PRIDE:P48002
EnsemblPlants:AT4G32040.1 GeneID:829335 KEGG:ath:AT4G32040
GeneFarm:4051 TAIR:At4g32040 eggNOG:NOG289289 InParanoid:P48002
OMA:NQVESEV PhylomeDB:P48002 ProtClustDB:CLSN2916152
Genevestigator:P48002 GermOnline:AT4G32040 Uniprot:P48002
Length = 383
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 159/224 (70%), Positives = 182/224 (81%)
Query: 66 EDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN 125
EDW + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS +
Sbjct: 111 EDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL-- 168
Query: 126 GRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGES 185
G V+D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQSLTGVSP ES
Sbjct: 169 GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSES 228
Query: 186 TGATMSXXXXXXXXXX-TNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELKQ 243
G TMS N FDGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELKQ
Sbjct: 229 NGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQ 288
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
G+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPT
Sbjct: 289 GFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
>TAIR|locus:2015554 [details] [associations]
symbol:KNAT7 "KNOTTED-like homeobox of Arabidopsis
thaliana 7" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010089 "xylem
development" evidence=RCA;IMP] [GO:2000652 "regulation of secondary
cell wall biogenesis" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048513 "organ development" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR005539 InterPro:IPR005540
InterPro:IPR005541 InterPro:IPR008422 InterPro:IPR009057
Pfam:PF03789 Pfam:PF03790 Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51213 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 EMBL:AC011000
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 HSSP:P55347 HOGENOM:HOG000272741 EMBL:AF308451
EMBL:AK118326 EMBL:BT026059 EMBL:AY084398 IPI:IPI00520539
PIR:A96655 RefSeq:NP_564805.1 UniGene:At.70104
ProteinModelPortal:Q9FPQ8 SMR:Q9FPQ8 IntAct:Q9FPQ8 STRING:Q9FPQ8
EnsemblPlants:AT1G62990.1 GeneID:842602 KEGG:ath:AT1G62990
GeneFarm:4000 TAIR:At1g62990 eggNOG:NOG273107 InParanoid:Q9FPQ8
OMA:HLPLIDA PhylomeDB:Q9FPQ8 ProtClustDB:CLSN2689003
Genevestigator:Q9FPQ8 GO:GO:2000652 Uniprot:Q9FPQ8
Length = 291
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 135/217 (62%), Positives = 164/217 (75%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D E
Sbjct: 30 KGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRHE 89
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSXX 193
LD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 90 LDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSED 149
Query: 194 XXXXXXXXTNFFDGSLD---GPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
++ G +D G D GFGPL+PTESERSLMERVR ELK ELKQG+K +I
Sbjct: 150 EDDLPMDFSSDNSG-VDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIE 208
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 209 DVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>TAIR|locus:2128828 [details] [associations]
symbol:KNAT1 "KNOTTED-like from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048513 "organ
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] [GO:0001708 "cell fate
specification" evidence=IMP] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010051 EMBL:AL161510
EMBL:U14174 EMBL:AF482994 EMBL:AF482995 EMBL:AC006267 EMBL:AY080834
EMBL:AY113982 IPI:IPI00527947 PIR:D85080 RefSeq:NP_192555.1
UniGene:At.28060 UniGene:At.72028 ProteinModelPortal:P46639
SMR:P46639 IntAct:P46639 STRING:P46639 EnsemblPlants:AT4G08150.1
GeneID:826364 KEGG:ath:AT4G08150 GeneFarm:4017 TAIR:At4g08150
eggNOG:NOG322286 HOGENOM:HOG000272741 InParanoid:P46639 OMA:FMADGMY
PhylomeDB:P46639 ProtClustDB:CLSN2685959 Genevestigator:P46639
GermOnline:AT4G08150 Uniprot:P46639
Length = 398
Score = 131 (51.2 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 191
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
ELDQFM Y +L ++E+L + ++ AME +
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFI 223
Score = 124 (48.7 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 279 ELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 332
>TAIR|locus:2027089 [details] [associations]
symbol:STM "SHOOT MERISTEMLESS" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019827 "stem cell maintenance" evidence=TAS] [GO:0009934
"regulation of meristem structural organization" evidence=IMP]
[GO:0009691 "cytokinin biosynthetic process" evidence=TAS]
[GO:0048440 "carpel development" evidence=RCA;IMP] [GO:0007389
"pattern specification process" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048438 "floral whorl development"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048513 "organ development"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC003113 GO:GO:0048440
GO:GO:0019827 GO:GO:0009934 GO:GO:0009691 HOGENOM:HOG000272741
EMBL:U32344 EMBL:AY080857 IPI:IPI00524301 PIR:S68456 PIR:T01446
RefSeq:NP_176426.1 UniGene:At.10801 ProteinModelPortal:Q38874
SMR:Q38874 IntAct:Q38874 STRING:Q38874 EnsemblPlants:AT1G62360.1
GeneID:842534 KEGG:ath:AT1G62360 GeneFarm:3999 TAIR:At1g62360
eggNOG:NOG298346 InParanoid:Q38874 OMA:DHISSTM PhylomeDB:Q38874
ProtClustDB:CLSN2682091 ArrayExpress:Q38874 Genevestigator:Q38874
GermOnline:AT1G62360 Uniprot:Q38874
Length = 382
Score = 127 (49.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 33/114 (28%), Positives = 62/114 (54%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + +++ S + A S G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAA--SMGPTGCLGEDPG 179
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G
Sbjct: 180 LDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSG 229
Score = 125 (49.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 262 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>TAIR|locus:2026810 [details] [associations]
symbol:KNAT2 "KNOTTED-like from Arabidopsis thaliana 2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010094
"specification of carpel identity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009723 "response to ethylene
stimulus" evidence=IGI] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IMP] [GO:0007059 "chromosome segregation"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0009062 "fatty acid
catabolic process" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0048438 "floral whorl
development" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009723 GO:GO:0043565
GO:GO:0003700 EMBL:AC010796 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 HOGENOM:HOG000272741 EMBL:U14175 EMBL:X81353
EMBL:X81354 IPI:IPI00542097 PIR:S57818 RefSeq:NP_177208.2
UniGene:At.21162 ProteinModelPortal:P46640 SMR:P46640 IntAct:P46640
STRING:P46640 EnsemblPlants:AT1G70510.1 GeneID:843388
KEGG:ath:AT1G70510 GeneFarm:4001 TAIR:At1g70510 eggNOG:NOG270511
InParanoid:P46640 OMA:MEIACIL PhylomeDB:P46640
ProtClustDB:CLSN2680790 Genevestigator:P46640 GermOnline:AT1G70510
GO:GO:0010094 Uniprot:P46640
Length = 310
Score = 114 (45.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LK +L + + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 208 DLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
Score = 107 (42.7 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 64 RAED-WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA 122
+AED + K++I HPLY +LL ++ C ++ P++ + I ++ R V K
Sbjct: 59 KAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPME-IACILEEIQRENHVY-KRDV 116
Query: 123 VANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVS 181
D ELD+FM Y +L +K L + EA +E LQ+L TG
Sbjct: 117 APLSCFGADPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTG-- 170
Query: 182 PGEST 186
P +T
Sbjct: 171 PASAT 175
>UNIPROTKB|P46609 [details] [associations]
symbol:OSH1 "Homeobox protein knotted-1-like 6"
species:39947 "Oryza sativa Japonica Group" [GO:0003677 "DNA
binding" evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0005634
"nucleus" evidence=IGI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IGI] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 GO:GO:0005634 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:DP000009
EMBL:AP008209 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG322286
HOGENOM:HOG000272741 EMBL:D16507 EMBL:AC145380
RefSeq:NP_001051139.2 UniGene:Os.151 ProteinModelPortal:P46609
EnsemblPlants:LOC_Os03g51690.1 EnsemblPlants:LOC_Os03g51690.2
GeneID:4333973 KEGG:osa:4333973 Gramene:P46609 OMA:DGHFIND
Uniprot:P46609
Length = 361
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
V ELKH L + Y + +++E+ +K++ GKLP D L WW H KWPYP+ S+
Sbjct: 239 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQ-K 297
Query: 293 SCIAISLFNSICTLNSYLV 311
+A S + +N++ +
Sbjct: 298 VALAESTGLDLKQINNWFI 316
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 56/200 (28%), Positives = 99/200 (49%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSA 122
A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + +A
Sbjct: 98 AADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLELRQRTA 151
Query: 123 VANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ + ELDQFM Y +L ++E+L + ++ AME + +E L +L+ +S
Sbjct: 152 LGVLGAATEPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLRR---VETQLNTLS-IS- 205
Query: 183 GESTGATMSXXXXXXXXXXTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR---HELKH 239
G S +S + G + P+ G V E + L+++ LK
Sbjct: 206 GRSLRNILSSGSSEEDQEGSG---GETELPEIDAHG--VDQELKHHLLKKYSGYLSSLKQ 260
Query: 240 EL-KQGYKEKIV-DIREEIL 257
EL K+ K K+ D R+++L
Sbjct: 261 ELSKKKKKGKLPKDARQQLL 280
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 335 289 0.00088 115 3 11 22 0.38 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 614 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.01u 0.12s 24.13t Elapsed: 00:00:01
Total cpu time: 24.01u 0.12s 24.13t Elapsed: 00:00:01
Start: Fri May 10 09:25:01 2013 End: Fri May 10 09:25:02 2013