BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019840
(335 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296084578|emb|CBI25599.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/296 (69%), Positives = 226/296 (76%), Gaps = 33/296 (11%)
Query: 24 PTWLNNAVRHH----------HHQNNDDDDDDEEEAPK----------NNKNNSASNDN- 62
PTWLNNA+ H Q N D A +NK N +N N
Sbjct: 62 PTWLNNAILRQQSQYADGSFLHLQTNSDSTSSPATATTTTNQWLSRSMSNKRNGGNNQNR 121
Query: 63 --GRAED---------WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS 111
ED WE + KA+I+ HPLYEQLLSAHVSCLRIATPVDQLP+IDAQL+
Sbjct: 122 GDNNGEDMLDCDSGGNWENARYKADILAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLA 181
Query: 112 RSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+S+ V+ KYS +AN + LDDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LE
Sbjct: 182 QSQGVVTKYSVLAN-QPLDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELE 240
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
QSLQSLTGVSPGE TGATMSDD++DQ DS+ N FDGSLDGPDSMGFGPLVPTE+ERSLME
Sbjct: 241 QSLQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETERSLME 300
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWW SH+KWPYPT
Sbjct: 301 RVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 356
>gi|356562896|ref|XP_003549704.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 344
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/266 (73%), Positives = 226/266 (84%), Gaps = 11/266 (4%)
Query: 22 PPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHP 81
PPPTWLNN + + D E+ +NN++ S N +ED + KA+I+GHP
Sbjct: 33 PPPTWLNNV-----NARQQNFLDTEKSVDRNNRSES----NCESEDLR--EYKADILGHP 81
Query: 82 LYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHY 141
LY+QLLSAHVSCLRIATPVDQLP+IDAQL +S+ V+ KYSA+A+ V+D+KELDQFMTHY
Sbjct: 82 LYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSALAHNGVVDEKELDQFMTHY 141
Query: 142 VLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSD 201
VLLL +FKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE TGATMSDD++DQ +S+
Sbjct: 142 VLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEGTGATMSDDEDDQAESN 201
Query: 202 TNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 261
N ++GSLDG +++GFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR
Sbjct: 202 ANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 261
Query: 262 AGKLPGDTTSLLKAWWLSHAKWPYPT 287
AGKLPGDTTSLLKAWW SH+KWPYPT
Sbjct: 262 AGKLPGDTTSLLKAWWQSHSKWPYPT 287
>gi|356548471|ref|XP_003542625.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 345
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/266 (73%), Positives = 224/266 (84%), Gaps = 10/266 (3%)
Query: 22 PPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHP 81
PPPTWLNN + QN D + ++N S SN E + + KA+I+GHP
Sbjct: 33 PPPTWLNNVNVNARQQNFLDSE------KSVDRNRSESN----CESEDLREYKADILGHP 82
Query: 82 LYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHY 141
LY+QLLSAHVSCLRIATPVDQLP+IDAQL +S+ V+ KYSA+A+ V+D+KELDQFMTHY
Sbjct: 83 LYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSALAHNGVVDEKELDQFMTHY 142
Query: 142 VLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSD 201
VLLL +FKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE TGATMSDD++DQ +S+
Sbjct: 143 VLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEGTGATMSDDEDDQAESN 202
Query: 202 TNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 261
N ++GSLDG +++GFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR
Sbjct: 203 ANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 262
Query: 262 AGKLPGDTTSLLKAWWLSHAKWPYPT 287
AGKLPGDTTSLLKAWW SH+KWPYPT
Sbjct: 263 AGKLPGDTTSLLKAWWQSHSKWPYPT 288
>gi|225463014|ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
Length = 430
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/253 (77%), Positives = 217/253 (85%), Gaps = 6/253 (2%)
Query: 40 DDDDDDEEEAPKNNKNNSASN-----DNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCL 94
D + + E+ NN+N +N D +WE + KA+I+ HPLYEQLLSAHVSCL
Sbjct: 133 DLNGNQEKRNGGNNQNRGDNNGEDMLDCDSGGNWENARYKADILAHPLYEQLLSAHVSCL 192
Query: 95 RIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
RIATPVDQLP+IDAQL++S+ V+ KYS +AN + LDDKELDQFMTHYVLLL SFKEQLQQ
Sbjct: 193 RIATPVDQLPRIDAQLAQSQGVVTKYSVLAN-QPLDDKELDQFMTHYVLLLCSFKEQLQQ 251
Query: 155 HVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDS 214
HVRVHAMEAVMACW+LEQSLQSLTGVSPGE TGATMSDD++DQ DS+ N FDGSLDGPDS
Sbjct: 252 HVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPDS 311
Query: 215 MGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLK 274
MGFGPLVPTE+ERSLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLK
Sbjct: 312 MGFGPLVPTETERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLK 371
Query: 275 AWWLSHAKWPYPT 287
AWW SH+KWPYPT
Sbjct: 372 AWWQSHSKWPYPT 384
>gi|329757149|gb|AEC04754.1| knotted-like homeobox KNOX5 [Fragaria vesca]
Length = 368
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/251 (76%), Positives = 215/251 (85%), Gaps = 4/251 (1%)
Query: 41 DDDDDEEEAPKNNKNNSA----SNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRI 96
D D + +A NNK+ S +W+ + KAEI+ HPLYE LLSAHV+CLRI
Sbjct: 4 DSADMKNDAALNNKSEGGVAVESGGGDGVMNWQNARHKAEILAHPLYEPLLSAHVACLRI 63
Query: 97 ATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHV 156
ATPVDQLP+IDAQL++S++V+AKYS +++G V DDKELDQFM HYVLLL SFKEQLQQHV
Sbjct: 64 ATPVDQLPRIDAQLAQSQNVVAKYSGMSHGMVGDDKELDQFMRHYVLLLCSFKEQLQQHV 123
Query: 157 RVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMG 216
RVHAMEAVMACW++EQSLQSLTGVSPGE TGATMSDDDE+QVDSD N FDGS+DG DSMG
Sbjct: 124 RVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEEQVDSDANLFDGSMDGHDSMG 183
Query: 217 FGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAW 276
FGPL+PTESERSLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAW
Sbjct: 184 FGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAW 243
Query: 277 WLSHAKWPYPT 287
W SH+KWPYPT
Sbjct: 244 WQSHSKWPYPT 254
>gi|356507510|ref|XP_003522507.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 411
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/221 (82%), Positives = 206/221 (93%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA
Sbjct: 144 NWQNARLKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLTQSQNVVAKYSAFGQA 203
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQF++HYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 204 IVGDDKELDQFLSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 263
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSD++++QVDSD N FDG+LDGPDSMGFGPL+PTE+ERSLMERVRHELKHELKQGYK
Sbjct: 264 GATMSDEEDEQVDSDANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELKHELKQGYK 323
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 324 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 364
>gi|356515190|ref|XP_003526284.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 400
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/221 (82%), Positives = 206/221 (93%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA
Sbjct: 133 NWQNARLKAEILTHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSAFGQA 192
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQF++HYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 193 IVGDDKELDQFLSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 252
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDD+++QVDSD N FDG+LDGPDSMGFGPL+PTE+ERSLMERVRHELKHELKQGYK
Sbjct: 253 GATMSDDEDEQVDSDANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELKHELKQGYK 312
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+KIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 313 DKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 353
>gi|359475858|ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3-like [Vitis vinifera]
Length = 415
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/226 (81%), Positives = 207/226 (91%), Gaps = 3/226 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
A +W+ + KAEI+ HPLYEQLLS+HV+CLRIATPVDQLP+IDAQL++S+ V++KYSA+
Sbjct: 144 AVNWQNARQKAEILAHPLYEQLLSSHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG 203
Query: 125 NGR---VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+G + D+KELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVS
Sbjct: 204 HGNSQMLGDEKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 263
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMSDD+EDQ+DSD N FDGSL+G DSMGFGPLVPTESERSLMERVR ELKHEL
Sbjct: 264 PGEGTGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELKHEL 323
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 324 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 369
>gi|224142451|ref|XP_002324571.1| predicted protein [Populus trichocarpa]
gi|222866005|gb|EEF03136.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/239 (76%), Positives = 210/239 (87%), Gaps = 2/239 (0%)
Query: 51 KNNKNNSASND--NGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
+N NN + + + +++WE KCKAEI+GHP YEQLL+AHV+CLRIATPVDQL +ID
Sbjct: 1 ENTTNNGSEEELVDSVSDNWERAKCKAEILGHPFYEQLLAAHVACLRIATPVDQLARIDT 60
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACW 168
QL+RS+DV+AKYS V G V+D+KELDQFMTHY LLL SFK+QLQQHVRVHAMEAVMACW
Sbjct: 61 QLARSQDVIAKYSGVGCGHVVDEKELDQFMTHYALLLCSFKDQLQQHVRVHAMEAVMACW 120
Query: 169 DLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERS 228
+LEQSLQSLTGVSPGE TGATMSDD++DQ +SDTNF DG+LDG D+MGFGPLVPTE+ERS
Sbjct: 121 ELEQSLQSLTGVSPGEGTGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERS 180
Query: 229 LMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LMERVR ELKHE KQ YKEKIVDIREEILRKRRAGKLPGDTTS LKAWW +H+KWPYP+
Sbjct: 181 LMERVRQELKHEFKQDYKEKIVDIREEILRKRRAGKLPGDTTSHLKAWWQTHSKWPYPS 239
>gi|356563910|ref|XP_003550200.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 405
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/263 (73%), Positives = 212/263 (80%), Gaps = 5/263 (1%)
Query: 26 WLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQ 85
WL H H DD E ++ + G A W+ +CK EI+ HPLYEQ
Sbjct: 101 WLARPALHRHPGEVIDDGAGESMV----EHADLKDGGGDAVSWQIGRCKTEILQHPLYEQ 156
Query: 86 LLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA-NGRVLDDKELDQFMTHYVLL 144
LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKY+ N V DDKELDQFM+HYVLL
Sbjct: 157 LLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYAVFGHNNIVADDKELDQFMSHYVLL 216
Query: 145 LYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNF 204
L SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGVSPGE TGATMSDD+ DQVDSD N
Sbjct: 217 LCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDENDQVDSDANL 276
Query: 205 FDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK 264
FD S DG DSMGFGPLVPTESERSLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGK
Sbjct: 277 FDCSFDGADSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK 336
Query: 265 LPGDTTSLLKAWWLSHAKWPYPT 287
LPGDTTS+LKAWW SH+KWPYPT
Sbjct: 337 LPGDTTSVLKAWWQSHSKWPYPT 359
>gi|168199347|gb|ABZ10964.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 384
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/276 (69%), Positives = 218/276 (78%), Gaps = 1/276 (0%)
Query: 12 LVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETV 71
L L T S + PT N + H +N + K+ A N+ A +WE
Sbjct: 57 LHLQTNSGSSNSPTAANRYMPHSDESDNHKRGGGSRVNDRYGKDEDAGNNEYGAVNWENA 116
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+CKAE++ HPLYEQLLSAHVSCLRIATPVDQLP+IDAQL +S+ V+AKY AV G LDD
Sbjct: 117 RCKAEVLSHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLVQSQSVVAKYLAVGPGN-LDD 175
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
KELDQFMT+YVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQ+LTGVSPGE G TMS
Sbjct: 176 KELDQFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQTLTGVSPGEGNGETMS 235
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
DD+++ +DSDT+ FDGSLD PDSMGFGPL+ T+SERSLMERVR ELKHELK GYK+KIVD
Sbjct: 236 DDEDNHMDSDTHLFDGSLDSPDSMGFGPLILTDSERSLMERVRQELKHELKNGYKDKIVD 295
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
IREEILRKRRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 296 IREEILRKRRAGKLPGDTTSHLKAWWKSHSKWPYPT 331
>gi|356530621|ref|XP_003533879.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 339
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/287 (67%), Positives = 225/287 (78%), Gaps = 14/287 (4%)
Query: 9 MQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSA-------SND 61
MQRL LP + PTWLNN+ Q N E A +N+ +
Sbjct: 1 MQRL-LPLSGG---APTWLNNSNAATLRQQNFLHLQPESAATAAQQNDDVRAMDRNRTES 56
Query: 62 NGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS 121
N A+D + KA+I+GHPLY+QLLSAHVSCLRIATPVDQLP+IDAQL +S+ V+ KYS
Sbjct: 57 NSEADD--LAEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVDKYS 114
Query: 122 AVANGR-VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV 180
+ NG V+DDKELDQFMTHYV+LL +FKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV
Sbjct: 115 GLGNGNGVVDDKELDQFMTHYVILLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGV 174
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
SPGE TGATMSD++EDQ +S+ N ++G +DG DS+ FGPLVPTE+ERSLMERVR ELKHE
Sbjct: 175 SPGEGTGATMSDNEEDQAESNANLYEGGMDGADSLSFGPLVPTETERSLMERVRQELKHE 234
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LKQGYK+KIVDIREEILRKRRAGKLPGDTTSLLKAWW SH+KWPYPT
Sbjct: 235 LKQGYKDKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 281
>gi|312282373|dbj|BAJ34052.1| unnamed protein product [Thellungiella halophila]
Length = 434
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/240 (76%), Positives = 208/240 (86%), Gaps = 9/240 (3%)
Query: 54 KNNSASNDNGRAED----WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
K+ + ND G A + W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQ
Sbjct: 140 KSGDSKNDGGAAAEGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQ 199
Query: 110 LSRSRDVLAKYSAVANGR--VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
L++S+ V+AKYSA+ G+ V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMAC
Sbjct: 200 LAQSQHVVAKYSALGAGQGLVADDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMAC 259
Query: 168 WDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESER 227
W++EQSLQSLTGVSPGE GATMSDD+++QV+SD N FDG L D +GFGPL+PTESER
Sbjct: 260 WEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESER 316
Query: 228 SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 317 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 376
>gi|132424655|gb|ABO33480.1| class II KNOX homeobox transcription factor [Medicago truncatula]
Length = 439
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/289 (66%), Positives = 225/289 (77%), Gaps = 17/289 (5%)
Query: 16 TTSTNPPPPTWLNNAVRHHHHQNNDDD---DDDEEEAPKNNKNNSASND-NGRAE----- 66
T+ T WL ++ H H D+ + E N KN+ S+ G++E
Sbjct: 102 TSDTVQTTGQWLARSILHRQHGEVIDNVTMASEVEHELANMKNDGDSDGLGGKSEVAVVG 161
Query: 67 -----DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS 121
+W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS
Sbjct: 162 DGGLVNWQMGRWKAEIMAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYS 221
Query: 122 AVAN--GRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
A G +DDKELD FM+HYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTG
Sbjct: 222 AFGQNIGAGVDDKELDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 281
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLD-GPDSMGFGPLVPTESERSLMERVRHELK 238
VSPGE TGATMSDD+++QVDSD N FDGS D G D+MGFGPL+PTE+ERSLMERVR ELK
Sbjct: 282 VSPGEGTGATMSDDEDEQVDSDANLFDGSFDGGADNMGFGPLIPTENERSLMERVRQELK 341
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
HELK GYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 342 HELKHGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 390
>gi|297808523|ref|XP_002872145.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
lyrata]
gi|297317982|gb|EFH48404.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
lyrata]
Length = 429
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/223 (81%), Positives = 201/223 (90%), Gaps = 6/223 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 152 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 211
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 212 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 271
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMSDD+++QV+SD N FDGSL D +GFGPLVPTESERSLMERVR ELKHELKQG
Sbjct: 272 GMGATMSDDEDEQVESDANLFDGSL---DVLGFGPLVPTESERSLMERVRQELKHELKQG 328
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 329 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 371
>gi|336112103|gb|AEI17370.1| knox-like protein 3 [Arabidopsis lyrata]
Length = 441
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/223 (81%), Positives = 201/223 (90%), Gaps = 6/223 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 152 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 211
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 212 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 271
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMSDD+++QV+SD N FDGSL D +GFGPLVPTESERSLMERVR ELKHELKQG
Sbjct: 272 GMGATMSDDEDEQVESDANLFDGSL---DVLGFGPLVPTESERSLMERVRQELKHELKQG 328
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 329 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 371
>gi|21539535|gb|AAM53320.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
gi|23197862|gb|AAN15458.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 306
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/237 (77%), Positives = 204/237 (86%), Gaps = 12/237 (5%)
Query: 60 NDNGRAE------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS 113
ND G A W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S
Sbjct: 15 NDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 74
Query: 114 RDVLAKYSAV---ANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDL 170
+ V+AKYSA+ A G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++
Sbjct: 75 QHVVAKYSALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 134
Query: 171 EQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
EQSLQSLTGVSPGE GATMSDD+++QV+SD N FDG L D +GFGPL+PTESERSLM
Sbjct: 135 EQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLM 191
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 192 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 248
>gi|21554222|gb|AAM63298.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 431
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/223 (80%), Positives = 200/223 (89%), Gaps = 6/223 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 154 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 213
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 214 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 273
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMSDD+++QV+SD N FDG L D +GFGPL+PTESERSLMERVR ELKHELKQG
Sbjct: 274 GMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQG 330
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 331 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>gi|15238743|ref|NP_197904.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
gi|1346387|sp|P48000.1|KNAT3_ARATH RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=Protein KNAT3
gi|1045042|emb|CAA63130.1| KNAT3 homeobox protein [Arabidopsis thaliana]
gi|4063731|gb|AAC98441.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
gi|332006030|gb|AED93413.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
Length = 431
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/223 (80%), Positives = 200/223 (89%), Gaps = 6/223 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 154 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 213
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 214 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 273
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMSDD+++QV+SD N FDG L D +GFGPL+PTESERSLMERVR ELKHELKQG
Sbjct: 274 GMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQG 330
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 331 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>gi|4098244|gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]
Length = 392
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/221 (85%), Positives = 205/221 (92%), Gaps = 1/221 (0%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 120 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 179
Query: 128 V-LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV+PGE T
Sbjct: 180 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 239
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQ DSDTNF DG DGPDSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 240 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 299
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 300 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 340
>gi|79328660|ref|NP_001031938.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
gi|332006031|gb|AED93414.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
Length = 419
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/223 (80%), Positives = 200/223 (89%), Gaps = 6/223 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 154 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 213
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 214 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 273
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMSDD+++QV+SD N FDG L D +GFGPL+PTESERSLMERVR ELKHELKQG
Sbjct: 274 GMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQG 330
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 331 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>gi|336112105|gb|AEI17371.1| Knox-like protein 3 [Capsella rubella]
Length = 391
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/226 (79%), Positives = 202/226 (89%), Gaps = 6/226 (2%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ K KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 113 AERWQNAKHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLD 172
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 173 TAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 232
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 233 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 289
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 290 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 335
>gi|365222902|gb|AEW69803.1| Hop-interacting protein THI041 [Solanum lycopersicum]
Length = 430
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/221 (85%), Positives = 205/221 (92%), Gaps = 1/221 (0%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 158 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 217
Query: 128 V-LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV+PGE T
Sbjct: 218 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 277
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQ DSDTNF DG DGPDSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 278 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 337
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 338 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 378
>gi|350535567|ref|NP_001233945.1| homeobox protein knotted-1-like LET12 [Solanum lycopersicum]
gi|6016226|sp|O22300.1|LET12_SOLLC RecName: Full=Homeobox protein knotted-1-like LET12
gi|2529703|gb|AAC49918.1| class II knotted-like homeodomain protein [Solanum lycopersicum]
Length = 426
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/221 (85%), Positives = 205/221 (92%), Gaps = 1/221 (0%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 158 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 217
Query: 128 V-LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV+PGE T
Sbjct: 218 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 277
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQ DSDTNF DG DGPDSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 278 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 337
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 338 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 378
>gi|224091647|ref|XP_002309315.1| predicted protein [Populus trichocarpa]
gi|222855291|gb|EEE92838.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/239 (77%), Positives = 213/239 (89%), Gaps = 2/239 (0%)
Query: 51 KNNKNNSASND--NGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
+NN NN + + + +++WE KCKAEI+GHPLYEQLL+AHV+CLRIATPVDQL +ID
Sbjct: 1 ENNTNNGSEEELIDSVSDNWERAKCKAEILGHPLYEQLLAAHVACLRIATPVDQLARIDT 60
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACW 168
QL++S+DV+AKYS V V+D+KELDQFMTHYV+LL SFK+QLQQHVRVHAMEAVMACW
Sbjct: 61 QLAQSQDVVAKYSGVGRSHVVDEKELDQFMTHYVILLCSFKDQLQQHVRVHAMEAVMACW 120
Query: 169 DLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERS 228
+LEQSLQSLTGVSPGE TGATMSDDD+DQ DSD N +DG+LDG D+MGFGPLVPTE+ERS
Sbjct: 121 ELEQSLQSLTGVSPGEGTGATMSDDDDDQADSDANLYDGNLDGLDTMGFGPLVPTETERS 180
Query: 229 LMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LMERVR ELKHELKQ YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWW +H+KWPYPT
Sbjct: 181 LMERVRQELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQTHSKWPYPT 239
>gi|312283117|dbj|BAJ34424.1| unnamed protein product [Thellungiella halophila]
Length = 388
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/240 (75%), Positives = 206/240 (85%), Gaps = 7/240 (2%)
Query: 52 NNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS 111
N S + AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL+
Sbjct: 96 NGGEESMIGEKKEAERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 155
Query: 112 RSRDVLAKYS---AVANGRVL-DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
++++V+AKYS A A G + D+KELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMAC
Sbjct: 156 QTQNVVAKYSSLEAAAQGLIAGDEKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMAC 215
Query: 168 WDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESER 227
W++EQSLQS TGVSPGE TGATMS+D+++QVDSD + FDGSLDG +GFGPLVPTESER
Sbjct: 216 WEIEQSLQSFTGVSPGEGTGATMSEDEDEQVDSDAHLFDGSLDG---LGFGPLVPTESER 272
Query: 228 SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 273 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 332
>gi|356556581|ref|XP_003546603.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
3-like [Glycine max]
Length = 369
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/293 (66%), Positives = 225/293 (76%), Gaps = 19/293 (6%)
Query: 7 QNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNN-----------DDDDDDEEEAPKNNKN 55
++MQRL LP + PTWLNN+ Q N +DD + +
Sbjct: 26 RDMQRL-LPLSGG---APTWLNNSTAATLRQQNFLHLQPESAATTQQNDDVRGGGGSGMD 81
Query: 56 NSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRD 115
+ + N +D + KA+I+GHPLY+QLLSAHVSCLRIATPVDQLP+IDAQL +S+
Sbjct: 82 RNRTESNSEPDD--LAEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQR 139
Query: 116 VLAKYSAVANGR-VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
V+ KYS + NG V+DDKELDQFMTHYV+LL +FKEQLQQHVRVHAMEAVMACW+LEQSL
Sbjct: 140 VVDKYSGIGNGNGVVDDKELDQFMTHYVILLCAFKEQLQQHVRVHAMEAVMACWELEQSL 199
Query: 175 QSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
QSLTGVSPGE TGATMSDD+EDQ +S+ N S+DG DS+ FGPLVPTE+ERSLMERVR
Sbjct: 200 QSLTGVSPGEGTGATMSDDEEDQAESNANX-SRSMDGADSLSFGPLVPTETERSLMERVR 258
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKHELKQGYK+KIVDIREEILRKRRAGKLPGDTTSLLKAWW SH+KWPYPT
Sbjct: 259 QELKHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 311
>gi|30683467|ref|NP_196667.2| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
gi|73915316|sp|P48001.3|KNAT4_ARATH RecName: Full=Homeobox protein knotted-1-like 4; AltName:
Full=Protein KNAT4
gi|26451634|dbj|BAC42914.1| putative homeobox protein knotted-1 like4 KNAT4 [Arabidopsis
thaliana]
gi|332004247|gb|AED91630.1| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
Length = 393
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/226 (78%), Positives = 202/226 (89%), Gaps = 6/226 (2%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 115 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 174
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 175 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 234
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 235 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 291
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>gi|163838594|dbj|BAF95776.1| class 2 knotted1-like protein [Nicotiana tabacum]
Length = 391
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/221 (84%), Positives = 205/221 (92%), Gaps = 1/221 (0%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 125 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 184
Query: 128 -VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV+PGE T
Sbjct: 185 PLLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 244
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQ DSDTNF +G DG DSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 245 GATMSDDDDDQADSDTNFLEGGFDGSDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 304
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 305 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 345
>gi|1045044|emb|CAA63131.1| KNAT4 homeobox protein [Arabidopsis thaliana]
Length = 393
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/226 (78%), Positives = 202/226 (89%), Gaps = 6/226 (2%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 115 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 174
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 175 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 234
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 235 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 291
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>gi|297807137|ref|XP_002871452.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
gi|297317289|gb|EFH47711.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/226 (79%), Positives = 201/226 (88%), Gaps = 6/226 (2%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 113 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 172
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 173 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 232
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS+D+++QV+SD FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 233 PGEGTGATMSEDEDEQVESDAPLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 289
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 290 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 335
>gi|9795158|emb|CAC03454.1| HOMEOBOX PROTEIN KNOTTED-1 LIKE 4 (KNAT4) [Arabidopsis thaliana]
Length = 419
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/234 (76%), Positives = 204/234 (87%), Gaps = 6/234 (2%)
Query: 57 SASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV 116
S + AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V
Sbjct: 107 SMIGEKKEAERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNV 166
Query: 117 LAKYSAVANGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQS 173
+AKYS + + L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQS
Sbjct: 167 VAKYSTLEAAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQS 226
Query: 174 LQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERV 233
LQS TGVSPGE TGATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERV
Sbjct: 227 LQSFTGVSPGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERV 283
Query: 234 RHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 284 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>gi|255565117|ref|XP_002523551.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223537258|gb|EEF38890.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 374
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/302 (66%), Positives = 234/302 (77%), Gaps = 26/302 (8%)
Query: 1 MAYNDQQNMQRLVLPT------TSTNPPPPTWLNNAV---------RHHHHQNNDDDDDD 45
MA+ D Q + T +S+ PTWL+ AV R+ H+N D++
Sbjct: 1 MAFQDHITQQEISFQTPLSASASSSASAGPTWLSKAVLMRNDDVLGRNRSHKN--DNNGG 58
Query: 46 EEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPK 105
+EE +++N+ +WE K KAEI+GHPLYEQLL+AHV+CLRIATPVDQL +
Sbjct: 59 QEEFFDGSEDNN---------NWERAKSKAEILGHPLYEQLLAAHVACLRIATPVDQLAR 109
Query: 106 IDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
ID QL++S++V+AKYS + NG+V+D+KELDQFMTHYVLLL SFK+QLQQHVRVHAMEAVM
Sbjct: 110 IDTQLAQSQEVVAKYSVLGNGQVIDEKELDQFMTHYVLLLCSFKDQLQQHVRVHAMEAVM 169
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTES 225
ACW+LEQSLQSLTG S GE TGATMSDDD+DQ DSD N +DGSL+G D MGFGPLVPTE+
Sbjct: 170 ACWELEQSLQSLTGASLGEGTGATMSDDDDDQADSDANLYDGSLEGLDCMGFGPLVPTET 229
Query: 226 ERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPY 285
ERSLME VR ELKHELKQ YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWW SHAKWPY
Sbjct: 230 ERSLMEHVRKELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHAKWPY 289
Query: 286 PT 287
PT
Sbjct: 290 PT 291
>gi|255548818|ref|XP_002515465.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223545409|gb|EEF46914.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 456
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/221 (83%), Positives = 203/221 (91%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLY+QLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ G
Sbjct: 160 NWQNARYKAEILSHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGQG 219
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQFMTHY LLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 220 LVADDKELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 279
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQVDSD N FD SLDG D+MGFGPL+PTESERSLMERVRHELKHELKQGYK
Sbjct: 280 GATMSDDDDDQVDSDANLFDPSLDGADTMGFGPLIPTESERSLMERVRHELKHELKQGYK 339
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKI DIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 340 EKIADIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 380
>gi|111038269|gb|ABH03531.1| class II knotted-like homeobox protein [Prunus persica]
gi|215983122|gb|ACJ71731.1| class II knotted-like homeobox transcription factor [Prunus
persica]
Length = 448
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/221 (82%), Positives = 205/221 (92%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ +G
Sbjct: 170 NWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHG 229
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQFM HYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 230 MVGDDKELDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 289
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDD++DQVDSD N FDGS++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYK
Sbjct: 290 GATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYK 349
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 350 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 390
>gi|167178664|gb|ABZ10963.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 408
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/317 (62%), Positives = 227/317 (71%), Gaps = 45/317 (14%)
Query: 16 TTSTNPPPPTWLNNAVRHHH--HQNNDDDDD----------------------DEEEAPK 51
++ N P WLNNA+ H HQ D+ E A
Sbjct: 46 SSEQNQTGPNWLNNAILRHQQNHQYGGDNSSGFLNLHASSNPNGDRMMSAASMSHESANL 105
Query: 52 NNKNNSASNDNGRAE------------------DWETVKCKAEIVGHPLYEQLLSAHVSC 93
+ + N NG E +W++ + KAE++ HPLYEQLLSAHVSC
Sbjct: 106 GDGSRVGRNGNGEQELVVESGAVVVAGGVEGAMNWQSARLKAEVLSHPLYEQLLSAHVSC 165
Query: 94 LRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR---VLDDKELDQFMTHYVLLLYSFKE 150
LRIATPVDQLP+IDAQLS+S+ V++KYS + G + DDKELDQFMT+YVLLL SFKE
Sbjct: 166 LRIATPVDQLPRIDAQLSQSQHVVSKYSGLGQGNQGLMGDDKELDQFMTNYVLLLCSFKE 225
Query: 151 QLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLD 210
QLQQHVRVHAMEAVMACW++EQSLQSLTGV+PGE TGATMSDD++DQVDSD N +DG LD
Sbjct: 226 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVAPGEGTGATMSDDEDDQVDSDANLYDGGLD 285
Query: 211 GPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTT 270
G D+MGFGPL+PTESERSLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTT
Sbjct: 286 GLDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTT 345
Query: 271 SLLKAWWLSHAKWPYPT 287
S+LKAWW SH+KWPYPT
Sbjct: 346 SVLKAWWQSHSKWPYPT 362
>gi|167178668|gb|ABZ10965.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 409
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/226 (76%), Positives = 196/226 (86%), Gaps = 1/226 (0%)
Query: 63 GRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA 122
G +WE + KAEI+ HPLY+QLL+AHVSCLRIATPVDQLP+IDAQL++S+++ AKY+A
Sbjct: 126 GGVINWENARFKAEILSHPLYDQLLAAHVSCLRIATPVDQLPRIDAQLAQSQNLAAKYAA 185
Query: 123 VANGRVLDDK-ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
G DDK +LDQFMT YVLLL SFK+QLQQHVRVHAMEAVMACWDLEQ+LQ+LTGVS
Sbjct: 186 AVQGSCADDKDQLDQFMTQYVLLLSSFKDQLQQHVRVHAMEAVMACWDLEQALQNLTGVS 245
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMSDD+ D D +TN FD +D DSMGFGPLVPT+SERSLMERVR ELKHEL
Sbjct: 246 PGEGTGATMSDDENDHADGETNMFDSGMDCSDSMGFGPLVPTDSERSLMERVRQELKHEL 305
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYK+KIVDIREEILRKRRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 306 KQGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWRSHSKWPYPT 351
>gi|302398821|gb|ADL36705.1| HD domain class transcription factor [Malus x domestica]
Length = 437
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/221 (82%), Positives = 204/221 (92%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL+ S++V+AKYSA+ NG
Sbjct: 171 NWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAXSQNVVAKYSALGNG 230
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQFM HYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 231 MVGDDKELDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 290
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDD++DQVDSD N FDGS++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYK
Sbjct: 291 GATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYK 350
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEI+RKRRAGKLPG+TTS+LKAWW SH+KWPYPT
Sbjct: 351 EKIVDIREEIMRKRRAGKLPGNTTSVLKAWWQSHSKWPYPT 391
>gi|210160856|gb|ACJ09316.1| KNAT3-like transcription factor [Juglans nigra]
Length = 482
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/224 (81%), Positives = 204/224 (91%), Gaps = 3/224 (1%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S +V+AKYSA+ +
Sbjct: 202 NWQNARYKAEILSHPLYEQLLSAHVTCLRIATPVDQLPRIDAQLAQSENVVAKYSALGHA 261
Query: 127 R---VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
V DDKELDQF+THYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPG
Sbjct: 262 TPSMVGDDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 321
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
E TGATMSDDD++QVDSD N FDG L+GPDSMGFGPL+PTE+ERSLMERVR ELKHELK
Sbjct: 322 EGTGATMSDDDDEQVDSDANLFDGGLEGPDSMGFGPLIPTETERSLMERVRQELKHELKL 381
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
GYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 382 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 425
>gi|357466089|ref|XP_003603329.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|132424659|gb|ABO33482.1| class II KNOX homeobox transcription factor [Medicago truncatula]
gi|355492377|gb|AES73580.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 371
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 218/267 (81%), Gaps = 9/267 (3%)
Query: 26 WLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQ 85
WL+ + H +H ++ DD K ++ A+ + +W+ K K EI+ HPLYEQ
Sbjct: 63 WLSRPILHRNH--SEVIDDVTGAGMKAEESGEATAEG--VMNWQKAKHKGEIMAHPLYEQ 118
Query: 86 LLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD---KELDQFMTHYV 142
LLSAHVSCLRIATPVDQLP+IDAQL+ S++V+AKYSA+ +LD+ K+LD FM+HYV
Sbjct: 119 LLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDDNKQLDHFMSHYV 178
Query: 143 LLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDT 202
LLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE TGATMS+D+++QVDSD
Sbjct: 179 LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDV 238
Query: 203 NFFDGSLDGPD-SM-GFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKR 260
N FDG LDG D SM GFGPLV TE+ERSLMERVRHELKHELKQGYKEKIVDIREEILRKR
Sbjct: 239 NLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKR 298
Query: 261 RAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RAGKLPGDTTS+LK WW SH+KWPYPT
Sbjct: 299 RAGKLPGDTTSVLKDWWQSHSKWPYPT 325
>gi|449455557|ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
gi|449485171|ref|XP_004157089.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 455
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/225 (82%), Positives = 205/225 (91%), Gaps = 4/225 (1%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ +
Sbjct: 185 NWQHARYKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHS 244
Query: 127 ----RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACWD+EQSLQSLTGVSP
Sbjct: 245 APPSMVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSP 304
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
GE TGATMSDDD+DQVDSD N FDGSLDGPD+MGFGPL+PTESERSLMERVR ELKHELK
Sbjct: 305 GEGTGATMSDDDDDQVDSDANVFDGSLDGPDTMGFGPLIPTESERSLMERVRQELKHELK 364
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
GYKEKIVDIREEILRKRRAGKLPGDTTS+LK WW SH+KWPYPT
Sbjct: 365 SGYKEKIVDIREEILRKRRAGKLPGDTTSVLKQWWQSHSKWPYPT 409
>gi|357466091|ref|XP_003603330.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355492378|gb|AES73581.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 373
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 218/267 (81%), Gaps = 9/267 (3%)
Query: 26 WLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQ 85
WL+ + H +H ++ DD K ++ A+ + +W+ K K EI+ HPLYEQ
Sbjct: 63 WLSRPILHRNH--SEVIDDVTGAGMKAEESGEATAEG--VMNWQKAKHKGEIMAHPLYEQ 118
Query: 86 LLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD---KELDQFMTHYV 142
LLSAHVSCLRIATPVDQLP+IDAQL+ S++V+AKYSA+ +LD+ K+LD FM+HYV
Sbjct: 119 LLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDDNKQLDHFMSHYV 178
Query: 143 LLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDT 202
LLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE TGATMS+D+++QVDSD
Sbjct: 179 LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDV 238
Query: 203 NFFDGSLDGPD-SM-GFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKR 260
N FDG LDG D SM GFGPLV TE+ERSLMERVRHELKHELKQGYKEKIVDIREEILRKR
Sbjct: 239 NLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKR 298
Query: 261 RAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RAGKLPGDTTS+LK WW SH+KWPYPT
Sbjct: 299 RAGKLPGDTTSVLKDWWQSHSKWPYPT 325
>gi|356552494|ref|XP_003544602.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 407
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/224 (83%), Positives = 203/224 (90%), Gaps = 1/224 (0%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
A +W+ + KAEI+ HPLYEQLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKY+A
Sbjct: 138 AVNWQIGRWKAEILQHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYAAFG 197
Query: 125 -NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
N V DDKELDQFM+HYVLLL SFKEQLQQHVRVHAMEAVMACWD+EQSLQSLTGVSPG
Sbjct: 198 HNNIVADDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSPG 257
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
E TGATMSDD++DQVDSD N FD S DG D MGFGPLVPTESERSLMERVR ELKHELKQ
Sbjct: 258 EGTGATMSDDEDDQVDSDANLFDSSFDGADGMGFGPLVPTESERSLMERVRQELKHELKQ 317
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
GYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 318 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 361
>gi|3116212|dbj|BAA25921.1| NTH23 [Nicotiana tabacum]
Length = 422
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 197/221 (89%), Gaps = 3/221 (1%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ KAEI+ HPL+EQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYS +
Sbjct: 159 NWQNAGYKAEILAHPLFEQLLSAHVACLRIATPVDQLPRIDAQLAQSQQVVAKYSTLGQN 218
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ DDKELDQF+THYVLLL FKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 219 -IGDDKELDQFLTHYVLLLCPFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 277
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDD++DQVDS+ N FDGSLDG D M FG +PTESERSLMERVR ELKH+LKQGYK
Sbjct: 278 GATMSDDEDDQVDSEANLFDGSLDGHDGMAFG--LPTESERSLMERVRQELKHDLKQGYK 335
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EK+VDIREEILRKRRAGKLPGDTTS+LKAWW SHAKWPYPT
Sbjct: 336 EKLVDIREEILRKRRAGKLPGDTTSVLKAWWQSHAKWPYPT 376
>gi|224143241|ref|XP_002324890.1| predicted protein [Populus trichocarpa]
gi|222866324|gb|EEF03455.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/240 (77%), Positives = 210/240 (87%), Gaps = 5/240 (2%)
Query: 53 NKNNSASNDNGRAE---DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
NK + D+G E +W+ + KA+I+ HPLY+QLLSAHV+CLRIATPVDQLP+IDAQ
Sbjct: 129 NKGEGEAMDSGGGESVVNWQNARYKADILTHPLYDQLLSAHVACLRIATPVDQLPRIDAQ 188
Query: 110 LSRSRDVLAKYSAVAN--GRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
L++S+ V+ KYSA+ + G V DDKELDQFMTHY LLL SFKEQLQQHVRVHAMEAVMAC
Sbjct: 189 LAQSQQVVTKYSALGSHQGLVPDDKELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMAC 248
Query: 168 WDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESER 227
W++EQSLQSLTGVSPGE TGATMSDDDEDQVDSD N F GSL+G D++GFGPLVPTESER
Sbjct: 249 WEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFVGSLEGADTLGFGPLVPTESER 308
Query: 228 SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
SLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 309 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 368
>gi|302398827|gb|ADL36708.1| HD domain class transcription factor [Malus x domestica]
Length = 427
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/221 (81%), Positives = 202/221 (91%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ NG
Sbjct: 161 NWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNG 220
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQFM +YVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 221 MVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 280
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
ATMSDD++DQVDSD N FD ++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYK
Sbjct: 281 SATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYK 340
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 341 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381
>gi|3023961|sp|O04136.1|KNAP3_MALDO RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=KNAP3
gi|1946222|emb|CAA96512.1| knotted1-like homeobox protein [Malus x domestica]
Length = 427
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/221 (81%), Positives = 202/221 (91%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ NG
Sbjct: 161 NWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNG 220
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQFM +YVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 221 MVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 280
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
ATMSDD++DQVDSD N FD ++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYK
Sbjct: 281 SATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYK 340
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 341 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381
>gi|168199344|gb|ABZ10962.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 412
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/228 (73%), Positives = 198/228 (86%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
++ G +WE + KAEI+ HPLYEQLL+AHVSCLRIATPVD+LP+I+AQL++S +++AK
Sbjct: 126 SEYGGVINWEKARFKAEILSHPLYEQLLAAHVSCLRIATPVDKLPQIEAQLAQSHNLVAK 185
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
Y+ G +DD+ELDQFMT YVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQ+LTG
Sbjct: 186 YADAVQGSCVDDEELDQFMTQYVLLLNSFKEQLQQHVRVHAMEAVMACWELEQALQNLTG 245
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKH 239
VSPGE TGATMSDD++ + + + N F+G D D+MGFGPLVPT+SERSLMERVR ELKH
Sbjct: 246 VSPGEGTGATMSDDEDYRAEGELNMFEGGTDCSDNMGFGPLVPTDSERSLMERVRQELKH 305
Query: 240 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKQGYK+KIVDIREEILRKRRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 306 ELKQGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWRSHSKWPYPT 353
>gi|388500714|gb|AFK38423.1| unknown [Medicago truncatula]
Length = 342
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/244 (73%), Positives = 206/244 (84%), Gaps = 4/244 (1%)
Query: 46 EEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPK 105
E E + + + + NDN E E + KAEI+GHPLY+QLLSAHVSCLRIATPVDQLP+
Sbjct: 44 EPERREKSMDRNHRNDNN-CETEELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPR 102
Query: 106 IDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
IDAQL +++ VL KYS+V G +D KELD FMTHYVLLL +FKEQLQQHVRVHAMEAVM
Sbjct: 103 IDAQLQQAQRVLQKYSSVGIGN-MDPKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVM 161
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPT 223
ACWDLEQSLQSLTGVS GE TGATMSDD+++Q +S+ ++ SLDG D++GFGPLVPT
Sbjct: 162 ACWDLEQSLQSLTGVSSGEGTGATMSDDEDEQAESNARLYNEGSSLDGVDTLGFGPLVPT 221
Query: 224 ESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKW 283
E+ERSLMERVR ELKHELKQGYKEKIVD+REEILRKRRAGKLPGDTTSLLKAWW SH+KW
Sbjct: 222 ETERSLMERVRLELKHELKQGYKEKIVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKW 281
Query: 284 PYPT 287
PYPT
Sbjct: 282 PYPT 285
>gi|449441886|ref|XP_004138713.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 462
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/226 (80%), Positives = 202/226 (89%), Gaps = 4/226 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
A +W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+ID+QLSRS++V AKYS++
Sbjct: 180 AMNWQNAQFKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDSQLSRSQNVAAKYSSLG 239
Query: 125 NGR---VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
NG V + KELDQFMTHYV LL SFKEQLQQHVRVHAMEAV ACW++EQSLQSLTGVS
Sbjct: 240 NGSQSIVSNGKELDQFMTHYVFLLCSFKEQLQQHVRVHAMEAVYACWEIEQSLQSLTGVS 299
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PG TGATMSDDDEDQ+DSD FDGSL+G D+MGFGPL+PTESERSLMERVRHELKHEL
Sbjct: 300 PGVGTGATMSDDDEDQIDSDA-MFDGSLEGHDTMGFGPLIPTESERSLMERVRHELKHEL 358
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K GYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 359 KNGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 404
>gi|449527309|ref|XP_004170654.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 461
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/226 (80%), Positives = 202/226 (89%), Gaps = 4/226 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
A +W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+ID+QLSRS++V AKYS++
Sbjct: 180 AMNWQNAQFKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDSQLSRSQNVAAKYSSLG 239
Query: 125 NGR---VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
NG V + KELDQFMTHYV LL SFKEQLQQHVRVHAMEAV ACW++EQSLQSLTGVS
Sbjct: 240 NGSQSIVSNGKELDQFMTHYVFLLCSFKEQLQQHVRVHAMEAVYACWEIEQSLQSLTGVS 299
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PG TGATMSDDDEDQ+DSD FDGSL+G D+MGFGPL+PTESERSLMERVRHELKHEL
Sbjct: 300 PGVGTGATMSDDDEDQIDSDA-MFDGSLEGHDTMGFGPLIPTESERSLMERVRHELKHEL 358
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K GYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 359 KNGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 404
>gi|221272018|sp|Q0J6N4.2|KNOSD_ORYSJ RecName: Full=Homeobox protein knotted-1-like 13; AltName:
Full=Homeobox protein OSH45
gi|1805618|dbj|BAA08553.1| OSH45 [Oryza sativa Japonica Group]
Length = 374
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+CKAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+A DD
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDD 166
Query: 132 -KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATM
Sbjct: 167 GRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 226
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD ++DQ DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++
Sbjct: 227 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 284
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
DIREEILRKRRAGKLPGDTTS LKAWW SHAKWPYPT
Sbjct: 285 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 321
>gi|357478479|ref|XP_003609525.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355510580|gb|AES91722.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 332
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/243 (73%), Positives = 204/243 (83%), Gaps = 5/243 (2%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K+ N ++ N E E + KAEI+GHPLY+QLLSAHVSCLRIATPVDQLP+I
Sbjct: 46 ERREKSMDRNHRNDTNCETE--ELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRI 103
Query: 107 DAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMA 166
DAQL +++ VL KYS+V G +D KELD FMTHYVLLL +FKEQLQQHVRVHAMEAVMA
Sbjct: 104 DAQLQQAQRVLQKYSSVGIGN-MDPKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMA 162
Query: 167 CWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTE 224
CWDLEQSLQSLTGVS GE TGATMSDD+++Q +S+ ++ SLDG D++GFGPLVPTE
Sbjct: 163 CWDLEQSLQSLTGVSSGEGTGATMSDDEDEQAESNARLYNEGSSLDGVDTLGFGPLVPTE 222
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
+ERSLMERVR ELKHELKQGYKEKIVD+REEILRKRRAGKLPGDTTSLLKAWW SH+KWP
Sbjct: 223 TERSLMERVRLELKHELKQGYKEKIVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWP 282
Query: 285 YPT 287
YPT
Sbjct: 283 YPT 285
>gi|1805617|dbj|BAA08552.1| OSH45 [Oryza sativa Japonica Group]
Length = 375
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+CKAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+A DD
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDD 166
Query: 132 -KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATM
Sbjct: 167 GRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 226
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD ++DQ DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++
Sbjct: 227 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 284
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
DIREEILRKRRAGKLPGDTTS LKAWW SHAKWPYPT
Sbjct: 285 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 321
>gi|357145509|ref|XP_003573667.1| PREDICTED: homeobox protein knotted-1-like 13-like [Brachypodium
distachyon]
Length = 367
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/233 (75%), Positives = 198/233 (84%), Gaps = 4/233 (1%)
Query: 57 SASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV 116
+A+ G + + KAE++ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V
Sbjct: 84 AAAMGGGMVVEEAEARSKAEVLAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGV 143
Query: 117 LAKYSAVANGRVLDD-KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+AKYS DD +ELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQ
Sbjct: 144 VAKYSTAGGLAAGDDTRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQ 203
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSM-GFGPLVPTESERSLMERVR 234
SLTGVSPGE TGATMSD ++DQ DS+ N +D SLDGPDSM GFG +PTESERSLMERVR
Sbjct: 204 SLTGVSPGEGTGATMSDGEDDQADSEANMYDASLDGPDSMGGFG--LPTESERSLMERVR 261
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKHELKQGYKEK+VDIREEILRKRRAGKLPGDTTS LK+WW SH+KWPYPT
Sbjct: 262 QELKHELKQGYKEKLVDIREEILRKRRAGKLPGDTTSTLKSWWQSHSKWPYPT 314
>gi|126644759|gb|ABO26062.1| KNOPE4 [Prunus persica]
Length = 417
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/280 (67%), Positives = 220/280 (78%), Gaps = 17/280 (6%)
Query: 24 PTWLNNA-VRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWE------------T 70
PTWLNNA R + +D +DD +P +N + + ++ +
Sbjct: 93 PTWLNNAAFRQQNSFLHDARNDDVVISPSGKSSNCSGRNRREISGYDGEEEEEDELECES 152
Query: 71 VKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV-ANG--R 127
+ KA++VGHPLYEQL+SAHVSCLRIATPVDQLP+ID QL +S+ V+ KYSA+ ANG +
Sbjct: 153 ARFKADLVGHPLYEQLVSAHVSCLRIATPVDQLPRIDEQLVQSQRVVDKYSALRANGDVQ 212
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
V+D+KELD FMT+YVLLL SFKEQLQQHVRVHAMEAV+ACW+L+QSLQSLTGVS GE TG
Sbjct: 213 VMDEKELDLFMTNYVLLLCSFKEQLQQHVRVHAMEAVIACWELDQSLQSLTGVSTGEGTG 272
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
ATMSDDD+ N +DGSLDGPD+MGFGPLVPTESERSLMERVR ELKHELKQGYKE
Sbjct: 273 ATMSDDDDQVDSD-INSYDGSLDGPDTMGFGPLVPTESERSLMERVRQELKHELKQGYKE 331
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 332 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 371
>gi|289655990|gb|ADD14043.1| class 2 KNOTTED-like transcription factor KNOPE4 [Prunus persica]
Length = 358
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/296 (64%), Positives = 227/296 (76%), Gaps = 21/296 (7%)
Query: 12 LVLPTTSTNPPP----PTWLNNA-VRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAE 66
+ + +++ PP PTWLNNA R + +D +DD +P +N + +
Sbjct: 18 MAFHSFASDQPPLSGAPTWLNNAAFRQQNSFLHDARNDDVVISPSGKSSNCSGRNRREIS 77
Query: 67 DWE------------TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR 114
++ + + KA++VGHPLYEQL+SAHVSCLRIATPVDQLP+ID QL +S+
Sbjct: 78 GYDGEEEEEDELECESARFKADLVGHPLYEQLVSAHVSCLRIATPVDQLPRIDEQLVQSQ 137
Query: 115 DVLAKYSAV-ANG--RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
V+ KYSA+ ANG +V+D+KELD FMT+YVLLL SFKEQLQQHVRVHAMEAV+ACW+L+
Sbjct: 138 RVVDKYSALRANGDVQVMDEKELDLFMTNYVLLLCSFKEQLQQHVRVHAMEAVIACWELD 197
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
QSLQSLTGVS GE TGATMSDDD+ N +DGSLDGPD+MGFGPLVPTESERSLME
Sbjct: 198 QSLQSLTGVSTGEGTGATMSDDDDQVDSD-INSYDGSLDGPDTMGFGPLVPTESERSLME 256
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 257 RVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 312
>gi|15236649|ref|NP_194932.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
gi|12644283|sp|P48002.2|KNAT5_ARATH RecName: Full=Homeobox protein knotted-1-like 5; AltName:
Full=Homeodomain-containing protein 1; AltName:
Full=Protein KNAT5
gi|17224610|gb|AAL37042.1|AF306661_1 homeodomain transcription factor KNAT5 [Arabidopsis thaliana]
gi|2506031|dbj|BAA22602.1| homeodomein containing protein 1 [Arabidopsis thaliana]
gi|3858938|emb|CAA16585.1| homeodomain containing protein 1 [Arabidopsis thaliana]
gi|7270108|emb|CAB79922.1| homeodomain containing protein 1 [Arabidopsis thaliana]
gi|109946421|gb|ABG48389.1| At4g32040 [Arabidopsis thaliana]
gi|332660597|gb|AEE85997.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
Length = 383
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/225 (73%), Positives = 192/225 (85%), Gaps = 4/225 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
EDW + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS +
Sbjct: 110 GEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL- 168
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V+D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQSLTGVSP E
Sbjct: 169 -GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSE 227
Query: 185 STGATMSDDDED-QVDSDTNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELK 242
S G TMSDD++D QV+S+ N FDGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELK
Sbjct: 228 SNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELK 287
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QG+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPT
Sbjct: 288 QGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
>gi|297802824|ref|XP_002869296.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
lyrata]
gi|297315132|gb|EFH45555.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/225 (72%), Positives = 192/225 (85%), Gaps = 4/225 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
EDW + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS +
Sbjct: 110 GEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL- 168
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V+D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQSLTGVSP E
Sbjct: 169 -GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSE 227
Query: 185 STGATMSDDDED-QVDSDTNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELK 242
S G TMS+D++D QV+S+ N +DGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELK
Sbjct: 228 SNGKTMSEDEDDNQVESEVNMYDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELK 287
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QG+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPT
Sbjct: 288 QGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
>gi|302398851|gb|ADL36720.1| HD domain class transcription factor [Malus x domestica]
Length = 371
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/221 (78%), Positives = 194/221 (87%), Gaps = 4/221 (1%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV-ANGRV 128
+ + KA+IVGHPLYEQL+SAHVS LRI TPVDQLP+ID +L +S+ V+ YSA+ ANG V
Sbjct: 95 SARFKADIVGHPLYEQLVSAHVSSLRIPTPVDQLPRIDEKLLQSQRVVDNYSALRANGDV 154
Query: 129 --LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+D+KELD FMT+YVLLL SFKEQLQQHVRVHAMEAVMACW+L+QSLQSLTGVS GE T
Sbjct: 155 GVMDEKELDLFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWELDQSLQSLTGVSTGEGT 214
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+ N +DGSLDGPD+MGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 215 GATMSDDDDQLDSD-INSYDGSLDGPDTMGFGPLVPTESERSLMERVRQELKHELKQGYK 273
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 274 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 314
>gi|373938269|dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]
Length = 438
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 176/256 (68%), Positives = 206/256 (80%), Gaps = 5/256 (1%)
Query: 36 HQNNDDDDDDEEEAPKNNKNNSASNDNGRAE---DWETVKCKAEIVGHPLYEQLLSAHVS 92
H++ D +++ E A D G + +W+ K KAEI+ HPLYEQLLSAHV+
Sbjct: 138 HESADLNNNKVENGGGGGGGELAGTDVGGGDGILNWQNAKYKAEILAHPLYEQLLSAHVA 197
Query: 93 CLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN-GRVLDDKELDQFMTHYVLLLYSFKEQ 151
CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ + +DKELDQFMTHYVLLL SFKEQ
Sbjct: 198 CLRIATPVDQLPRIDAQLAQSQHVVAKYSALGGPTSIGNDKELDQFMTHYVLLLCSFKEQ 257
Query: 152 LQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDG 211
LQQHVRVH MEAVMACW++EQSLQSLTG+ PGE TGATMSDDD+DQVDSDTN FD +LDG
Sbjct: 258 LQQHVRVHVMEAVMACWEIEQSLQSLTGIPPGEGTGATMSDDDDDQVDSDTNLFDANLDG 317
Query: 212 PDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 271
PDSM FGPL+PTESERSLMERVR ELKHELK+ + K+ + ILRKRRAGKLPGDTTS
Sbjct: 318 PDSMNFGPLIPTESERSLMERVRQELKHELKRVTRRKLWTL-GRILRKRRAGKLPGDTTS 376
Query: 272 LLKAWWLSHAKWPYPT 287
+LKAWW SH+KWPYPT
Sbjct: 377 VLKAWWQSHSKWPYPT 392
>gi|302771457|ref|XP_002969147.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300163652|gb|EFJ30263.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 287
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 158/224 (70%), Positives = 188/224 (83%), Gaps = 4/224 (1%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN-- 125
W++ + KA++V HPLYEQLLSAH+SCLR ATPVDQLPKIDAQL+ S V AKYS +A
Sbjct: 18 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILATNE 77
Query: 126 -GRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACW+LEQSL +LTGVSPGE
Sbjct: 78 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGVSPGE 137
Query: 185 STGATMSDDDEDQ-VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
TGATMS+D++DQ DSD+ ++D +DG D GFGPL+PTE+ER+LMERVRHELK ELKQ
Sbjct: 138 GTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHELKIELKQ 197
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
GYK KI D+REEILRKRRAGKLPGDTTS+LK WW +H+KWPYP+
Sbjct: 198 GYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 241
>gi|302784286|ref|XP_002973915.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300158247|gb|EFJ24870.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 287
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 158/224 (70%), Positives = 188/224 (83%), Gaps = 4/224 (1%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--- 124
W++ + KA++V HPLYEQLLSAH+SCLR ATPVDQLPKIDAQL+ S V AKYS +A
Sbjct: 18 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILAANE 77
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACW+LEQSL +LTGVSPGE
Sbjct: 78 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGVSPGE 137
Query: 185 STGATMSDDDEDQ-VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
TGATMS+D++DQ DSD+ ++D +DG D GFGPL+PTE+ER+LMERVRHELK ELKQ
Sbjct: 138 GTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHELKIELKQ 197
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
GYK KI D+REEILRKRRAGKLPGDTTS+LK WW +H+KWPYP+
Sbjct: 198 GYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 241
>gi|312281601|dbj|BAJ33666.1| unnamed protein product [Thellungiella halophila]
Length = 385
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 187/222 (84%), Gaps = 4/222 (1%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
W + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS + G
Sbjct: 116 WRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL--GV 173
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
V D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQS+TGVSP E+ G
Sbjct: 174 VEDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSITGVSPSENNG 233
Query: 188 ATMSDD-DEDQVDSDTNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELKQGY 245
TMSDD D +QV+S+ N FDGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELKQG+
Sbjct: 234 KTMSDDEDGNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGF 293
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KEKI DIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPT
Sbjct: 294 KEKIEDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 335
>gi|11463943|dbj|BAB18585.1| CRKNOX3 [Ceratopteris richardii]
Length = 436
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/223 (68%), Positives = 189/223 (84%), Gaps = 3/223 (1%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
W+ + KA+I HPLY+QLL+AHV+CLRIATPVDQLP+IDAQ++++ ++AKY+ +
Sbjct: 168 WQNARLKADITMHPLYDQLLAAHVACLRIATPVDQLPRIDAQIAQASQIVAKYAVLGQNN 227
Query: 128 VL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
+L + ELDQFM HYVLLL +FKEQLQQHV+VHAMEAVMACW+LEQSL +LTGVSPGE
Sbjct: 228 LLVGEEKDELDQFMAHYVLLLCTFKEQLQQHVKVHAMEAVMACWELEQSLLTLTGVSPGE 287
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
TGATMSDDD+D +SD + +D + D DS FGPL+PTE+ER+LMERVR ELK+ELK G
Sbjct: 288 GTGATMSDDDDDPAESDPSIYDPAFDTHDSGAFGPLIPTETERTLMERVRQELKNELKNG 347
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YK++IVD+REEILRKRRAGKLPGDTTS+LKAWW +H+KWPYPT
Sbjct: 348 YKDRIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 390
>gi|357138416|ref|XP_003570788.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
distachyon]
Length = 304
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/214 (73%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ L + A G + E
Sbjct: 47 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLVAAAGSAGGPSGGE-E 105
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSDD
Sbjct: 106 LDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDD 165
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+++QVDS+TN FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK ELKQGYKEK+VDIR
Sbjct: 166 EDNQVDSETNLFDGN-DGSDGMGFGPLILTEGERSLIERVRHELKSELKQGYKEKLVDIR 224
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EEI+RKRRAGKLPGDT + LKAWW +H+KWPYPT
Sbjct: 225 EEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPT 258
>gi|302771459|ref|XP_002969148.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
gi|300163653|gb|EFJ30264.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
Length = 293
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/230 (67%), Positives = 185/230 (80%), Gaps = 10/230 (4%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN-- 125
W++ + KA++V HPLYEQLLSAH+SCLR ATPVDQLPKIDAQL+ S V AKYS +A
Sbjct: 18 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILATNE 77
Query: 126 -GRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV---- 180
G D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACW+LEQSL +LTG
Sbjct: 78 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGKHNFT 137
Query: 181 --SPGESTGATMSDDDEDQ-VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHEL 237
S E TGATMS+D++DQ DSD+ ++D +DG D GFGPL+PTE+ER+LMERVRHEL
Sbjct: 138 SRSKREGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHEL 197
Query: 238 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K ELKQGYK KI D+REEILRKRRAGKLPGDTTS+LK WW +H+KWPYP+
Sbjct: 198 KIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 247
>gi|221272028|sp|Q0E3C3.2|KNOS2_ORYSJ RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=Homeobox protein HOS58
gi|215769326|dbj|BAH01555.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 313
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/215 (74%), Positives = 181/215 (84%), Gaps = 2/215 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA SA A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSD
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 162
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQGYKEK+VDI
Sbjct: 163 DEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDI 221
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
REEILRKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 222 REEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 256
>gi|302784284|ref|XP_002973914.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
gi|300158246|gb|EFJ24869.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
Length = 363
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/230 (67%), Positives = 185/230 (80%), Gaps = 10/230 (4%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--- 124
W++ + KA++V HPLYEQLLSAH+SCLR ATPVDQLPKIDAQL+ S V AKYS +A
Sbjct: 88 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILAANE 147
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV---- 180
G D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACW+LEQSL +LTG
Sbjct: 148 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGKHNFT 207
Query: 181 --SPGESTGATMSDDDEDQ-VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHEL 237
S E TGATMS+D++DQ DSD+ ++D +DG D GFGPL+PTE+ER+LMERVRHEL
Sbjct: 208 SRSKREGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHEL 267
Query: 238 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K ELKQGYK KI D+REEILRKRRAGKLPGDTTS+LK WW +H+KWPYP+
Sbjct: 268 KIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 317
>gi|242060764|ref|XP_002451671.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
gi|241931502|gb|EES04647.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
Length = 444
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 179/215 (83%), Gaps = 2/215 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A +
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGGE 107
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSD
Sbjct: 108 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 167
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+VDI
Sbjct: 168 DEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRQELKNELKQGYKEKLVDI 226
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
REEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 227 REEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 261
>gi|413935911|gb|AFW70462.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 310
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 179/215 (83%), Gaps = 2/215 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A +
Sbjct: 42 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGGE 101
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSD
Sbjct: 102 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 161
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+VDI
Sbjct: 162 DEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKNELKQGYKEKLVDI 220
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
REEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 221 REEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 255
>gi|293334789|ref|NP_001169973.1| putative knotted-like transcription factor family protein [Zea
mays]
gi|224032663|gb|ACN35407.1| unknown [Zea mays]
gi|413935912|gb|AFW70463.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 300
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 179/215 (83%), Gaps = 2/215 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A +
Sbjct: 42 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGGE 101
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSD
Sbjct: 102 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 161
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+VDI
Sbjct: 162 DEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKNELKQGYKEKLVDI 220
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
REEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 221 REEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 255
>gi|218198650|gb|EEC81077.1| hypothetical protein OsI_23897 [Oryza sativa Indica Group]
Length = 323
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/225 (71%), Positives = 184/225 (81%), Gaps = 8/225 (3%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE + KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA +A A
Sbjct: 44 WE--REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAA 101
Query: 128 VLDD-----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SP
Sbjct: 102 AAGGAPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASP 161
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
GE +GATMSDD+++QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELK
Sbjct: 162 GEGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELK 220
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QGY+EK+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 221 QGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>gi|413954622|gb|AFW87271.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 316
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/222 (70%), Positives = 183/222 (82%), Gaps = 5/222 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE + KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ + +A A
Sbjct: 40 WE--REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPMEAAAAAAAAG 97
Query: 128 VLDD--KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGES 185
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE
Sbjct: 98 GAHSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEG 157
Query: 186 TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
TGATMSDD+++QVDS++N FDG+ +G D MGFGPL+ TE ERSL+ERVR ELKHELKQGY
Sbjct: 158 TGATMSDDEDNQVDSESNMFDGN-EGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGY 216
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++K+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 217 RDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 258
>gi|357123228|ref|XP_003563314.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
distachyon]
Length = 317
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/220 (70%), Positives = 181/220 (82%), Gaps = 6/220 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE + KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ A A+
Sbjct: 46 WE--REKAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPAPVPPAAAHS- 102
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TG
Sbjct: 103 --GGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTG 160
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
ATMSDD+++ +D+++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELKQGY+E
Sbjct: 161 ATMSDDEDNPIDTESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYRE 219
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K++DIREEILRKRRAGKLPGDT S LKAWW +HAKWPYPT
Sbjct: 220 KLIDIREEILRKRRAGKLPGDTASTLKAWWQAHAKWPYPT 259
>gi|195619568|gb|ACG31614.1| homeobox protein knotted-1-like 3 [Zea mays]
Length = 298
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/215 (72%), Positives = 178/215 (82%), Gaps = 2/215 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A +
Sbjct: 40 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGGE 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TG TMSD
Sbjct: 100 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGGTMSD 159
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+VDI
Sbjct: 160 DEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGYKEKLVDI 218
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
REEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 219 REEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 253
>gi|413926367|gb|AFW66299.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 363
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 156/220 (70%), Positives = 178/220 (80%), Gaps = 7/220 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-- 131
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A
Sbjct: 100 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAAGG 159
Query: 132 ----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TG
Sbjct: 160 PSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTG 219
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
TMSDD+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKE
Sbjct: 220 GTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGYKE 278
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 279 KLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 318
>gi|162458143|ref|NP_001105852.1| KNOX family class 2 homeodomain protein [Zea mays]
gi|126153888|emb|CAJ58046.2| KNOX family class 2 homeodomain protein [Zea mays]
Length = 304
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/220 (70%), Positives = 178/220 (80%), Gaps = 7/220 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-- 131
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A
Sbjct: 41 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAAGG 100
Query: 132 ----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TG
Sbjct: 101 PSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTG 160
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
TMSDD+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKE
Sbjct: 161 GTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGYKE 219
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 220 KLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 259
>gi|221272019|sp|Q94LW4.2|KNOSB_ORYSJ RecName: Full=Homeobox protein knotted-1-like 11; AltName:
Full=Homeobox protein HOS59
gi|215768803|dbj|BAH01032.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 183/225 (81%), Gaps = 8/225 (3%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE + KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA +A A
Sbjct: 44 WE--REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAA 101
Query: 128 VLDD-----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SP
Sbjct: 102 AAGGAPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASP 161
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
E +GATMSDD+++QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELK
Sbjct: 162 REGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELK 220
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QGY+EK+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 221 QGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>gi|413926368|gb|AFW66300.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 328
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/220 (70%), Positives = 178/220 (80%), Gaps = 7/220 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-- 131
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA + A
Sbjct: 40 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAAGG 99
Query: 132 ----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TG
Sbjct: 100 PSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTG 159
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
TMSDD+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKE
Sbjct: 160 GTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGYKE 218
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 219 KLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 258
>gi|115469202|ref|NP_001058200.1| Os06g0646600 [Oryza sativa Japonica Group]
gi|14149139|dbj|BAB55659.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|51535417|dbj|BAD37316.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|51535639|dbj|BAD37613.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|113596240|dbj|BAF20114.1| Os06g0646600 [Oryza sativa Japonica Group]
Length = 317
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 183/225 (81%), Gaps = 8/225 (3%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE + KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA +A A
Sbjct: 44 WE--REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAA 101
Query: 128 VLDD-----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SP
Sbjct: 102 AAGGAPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASP 161
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
E +GATMSDD+++QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELK
Sbjct: 162 REGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELK 220
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QGY+EK+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 221 QGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>gi|294461542|gb|ADE76332.1| unknown [Picea sitchensis]
Length = 354
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/223 (70%), Positives = 183/223 (82%), Gaps = 3/223 (1%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
W++ + KA+IV HPLY+QLLSAH+ CLRIATP DQ +IDAQL++S+ V+ KYS + N
Sbjct: 86 WQSARIKADIVSHPLYDQLLSAHLECLRIATPKDQHSRIDAQLAQSQHVVTKYSVLGNDN 145
Query: 128 VL--DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGES 185
+L D KELDQFMT YVLLL SFKEQLQ HV VH MEAV AC DL+ SL +LTGVSPGE
Sbjct: 146 ILVSDKKELDQFMTQYVLLLCSFKEQLQYHVHVHVMEAVRACIDLQHSLLTLTGVSPGEG 205
Query: 186 TGATMSDDDEDQVDSDTNFFDGSLDG-PDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
TGATMSDD++D DSDT+ +DG LDG D +G GPL+PTESERSLMERVR ELK +LKQG
Sbjct: 206 TGATMSDDEDDNADSDTDLYDGGLDGGQDMVGLGPLIPTESERSLMERVRQELKVDLKQG 265
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y+ KI D+REEILRKRRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 266 YRAKIADVREEILRKRRAGKLPGDTTSRLKAWWQSHSKWPYPT 308
>gi|33333542|gb|AAQ11887.1| knotted 7 [Hordeum vulgare]
Length = 340
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/214 (71%), Positives = 176/214 (82%), Gaps = 7/214 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ ++ +G +E
Sbjct: 46 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARAPPPMPPASALSG----GEE 101
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATMSDD
Sbjct: 102 LDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMSDD 161
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+++ VDS++N FDG+ D D MGFG L TE ERSL+ERVR ELKHELKQGY+EK+VDIR
Sbjct: 162 EDNPVDSESNMFDGN-DVSDGMGFGML--TEGERSLVERVRQELKHELKQGYREKLVDIR 218
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EEILRKRRAGKLPGDT S LKAWW +HAKWPYPT
Sbjct: 219 EEILRKRRAGKLPGDTASTLKAWWQAHAKWPYPT 252
>gi|326534150|dbj|BAJ89425.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/214 (71%), Positives = 176/214 (82%), Gaps = 7/214 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ ++ +G +E
Sbjct: 45 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARAPPPMPPASALSG----GEE 100
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATMSDD
Sbjct: 101 LDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMSDD 160
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+++ VDS++N FDG+ D D MGFG L TE ERSL+ERVR ELKHELKQGY+EK+VDIR
Sbjct: 161 EDNPVDSESNMFDGN-DVSDGMGFGML--TEGERSLVERVRQELKHELKQGYREKLVDIR 217
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EEILRKRRAGKLPGDT S LKAWW +HAKWPYPT
Sbjct: 218 EEILRKRRAGKLPGDTASTLKAWWQAHAKWPYPT 251
>gi|58011289|gb|AAW62519.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 363
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/226 (66%), Positives = 179/226 (79%), Gaps = 15/226 (6%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
++ K KA+IV HPLYEQLL AHVSCLRIATPVDQL KID Q+++ ++AKY +AN ++
Sbjct: 98 QSAKLKADIVTHPLYEQLLEAHVSCLRIATPVDQLGKIDGQIAQCHQLIAKYYILANHQL 157
Query: 129 L---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGES 185
L ELDQFM HYV+LL SFK+QLQ HVRVHA EAVMACW+LEQSL LTGVSPGE
Sbjct: 158 LCGNSKDELDQFMAHYVMLLRSFKDQLQHHVRVHAKEAVMACWELEQSLLGLTGVSPGEG 217
Query: 186 TGATMSDDD----EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
+GATMSDD+ E Q +SD D++GFGPL+PTE+ER+LMERVR ELKHEL
Sbjct: 218 SGATMSDDETTEQEQQCESDL--------WQDNLGFGPLIPTETERTLMERVRQELKHEL 269
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K GY+ +IVD+R EILRKRRAGKLPGDTTS+LKAWW +H+KWPYPT
Sbjct: 270 KHGYRARIVDVRXEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 315
>gi|296082096|emb|CBI21101.3| unnamed protein product [Vitis vinifera]
Length = 219
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/158 (90%), Positives = 151/158 (95%)
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
D+KELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE TGAT
Sbjct: 4 DEKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 63
Query: 190 MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
MSDD+EDQ+DSD N FDGSL+G DSMGFGPLVPTESERSLMERVR ELKHELKQGYKEKI
Sbjct: 64 MSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELKHELKQGYKEKI 123
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
VDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 124 VDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 161
>gi|356514089|ref|XP_003525739.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 293
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 175/218 (80%), Gaps = 3/218 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-- 129
+ KAEI HPLYEQLLSAHVSCLR+ATP+DQLP ID QLS+S +L Y++ + +
Sbjct: 27 QVKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDGQLSQSHHLLRSYASHHSHSLSPH 86
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
D +ELD FM Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE TGAT
Sbjct: 87 DRQELDNFMAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIESTLQALTGVSLGEGTGAT 146
Query: 190 MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
MSDD ED + D + S +G D MGFGPL+PTESERSLMERVR ELK ELKQG+K +I
Sbjct: 147 MSDD-EDDLQMDGSLDQSSAEGHDLMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 205
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
D+REEILRKRRAGKLPGDTTS+LKAWW HAKWPYPT
Sbjct: 206 EDVREEILRKRRAGKLPGDTTSVLKAWWQQHAKWPYPT 243
>gi|363806766|ref|NP_001242278.1| uncharacterized protein LOC100782179 [Glycine max]
gi|255635799|gb|ACU18248.1| unknown [Glycine max]
Length = 292
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/233 (65%), Positives = 180/233 (77%), Gaps = 10/233 (4%)
Query: 57 SASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV 116
SA+ D+ R + KAEI HPLYEQLLSAHVSCLR+ATP+DQLP ID QLS+S +
Sbjct: 18 SAAGDHHR-------QVKAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDGQLSQSHHL 70
Query: 117 LAKYSAVANGRVL--DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
L Y++ + + D +ELD FM Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +L
Sbjct: 71 LRSYASHHSHSLSPHDRQELDNFMAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIESTL 130
Query: 175 QSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
Q+LTGVS GE TGATMSDD ED + + + S DG D MGFGPL+PTESERSLMERVR
Sbjct: 131 QALTGVSLGEGTGATMSDD-EDDLQMNGSLDQSSADGHDMMGFGPLLPTESERSLMERVR 189
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK ELKQG+K +I D+REEILRKRRAGKLPG TTS+LKAWW HAKWPYPT
Sbjct: 190 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGATTSVLKAWWQQHAKWPYPT 242
>gi|326493406|dbj|BAJ85164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 169/204 (82%), Gaps = 7/204 (3%)
Query: 84 EQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVL 143
E+LL AHV+CLR+ATPVDQLP+IDAQ++ ++ +G +ELD FMTHYVL
Sbjct: 1 ERLLEAHVACLRVATPVDQLPRIDAQIAARAPPPMPPASALSG----GEELDLFMTHYVL 56
Query: 144 LLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTN 203
LL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATMSDD+++ VDS++N
Sbjct: 57 LLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMSDDEDNPVDSESN 116
Query: 204 FFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAG 263
FDG+ D D MGFG L TE ERSL+ERVR ELKHELKQGY+EK+VDIREEILRKRRAG
Sbjct: 117 MFDGN-DVSDGMGFGML--TEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAG 173
Query: 264 KLPGDTTSLLKAWWLSHAKWPYPT 287
KLPGDT S LKAWW +HAKWPYPT
Sbjct: 174 KLPGDTASTLKAWWQAHAKWPYPT 197
>gi|118481200|gb|ABK92551.1| unknown [Populus trichocarpa]
Length = 301
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/224 (65%), Positives = 178/224 (79%), Gaps = 6/224 (2%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--G 126
++ + KAEI HPLYEQLLSAHVSCLR+ATP+DQLP IDAQLS+S +L Y++ N G
Sbjct: 33 QSRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQHNQHG 92
Query: 127 RVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
L + ++LD F+ Y+++L +FK+QLQQHVRVHA+EAVMAC ++E +LQ+LTGV+ G
Sbjct: 93 HSLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLG 152
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
E TGATMSDD ED + D + S DG D MGFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 153 EGTGATMSDD-EDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQ 211
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
G+K +I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 212 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPT 255
>gi|224058619|ref|XP_002299569.1| predicted protein [Populus trichocarpa]
gi|222846827|gb|EEE84374.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/224 (65%), Positives = 178/224 (79%), Gaps = 6/224 (2%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--G 126
++ + KAEI HPLYEQLLSAHVSCLR+ATP+DQLP IDAQLS+S +L Y++ N G
Sbjct: 25 QSRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQHNQHG 84
Query: 127 RVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
L + ++LD F+ Y+++L +FK+QLQQHVRVHA+EAVMAC ++E +LQ+LTGV+ G
Sbjct: 85 HSLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLG 144
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
E TGATMSDD ED + D + S DG D MGFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 145 EGTGATMSDD-EDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQ 203
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
G+K +I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 204 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPT 247
>gi|302822121|ref|XP_002992720.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
gi|302823880|ref|XP_002993588.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
gi|300138600|gb|EFJ05363.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
gi|300139461|gb|EFJ06201.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
Length = 275
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/222 (66%), Positives = 176/222 (79%), Gaps = 8/222 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL---D 130
KA+IV HPLYEQLL AHV+CLRIATPVDQL +ID Q+S+ +AKYS +AN ++L
Sbjct: 6 KADIVTHPLYEQLLEAHVACLRIATPVDQLSRIDGQISQCHHAIAKYSILANHQLLCGSS 65
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGESTGAT 189
+ELD FM HYV+LL SFK+QLQ HVRVHA EAVMACW+LEQSL SLT G +PGE TGAT
Sbjct: 66 KEELDHFMAHYVMLLKSFKDQLQHHVRVHAKEAVMACWELEQSLISLTAGAAPGEGTGAT 125
Query: 190 MSDDDEDQVDSDTNFFDGSLDG----PDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
MSDD+++Q D++GFGPL+PTE+ER+LMERVR ELKHELKQGY
Sbjct: 126 MSDDEDEQQQPQQEQQQQQQSDSDYWQDNLGFGPLIPTETERTLMERVRQELKHELKQGY 185
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +IVD+REEILRKRRAGKLPGDTTS+LKAWW +H+KWPYPT
Sbjct: 186 RARIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 227
>gi|356495645|ref|XP_003516685.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 377
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 173/219 (78%), Gaps = 5/219 (2%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ KAEI HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLS+S +L Y + N L
Sbjct: 115 QLKAEITTHPLYEQLLAAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYVS-HNTHSLSP 173
Query: 132 ---KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+ELD F+ Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE TGA
Sbjct: 174 HHRQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENALQALTGVSLGEGTGA 233
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
TMSDD ED + D + S +G D MGFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 234 TMSDD-EDDLQMDISLDQSSAEGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSR 292
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEILRKRRAGKLPGDTTS+LK WW HAKWPYPT
Sbjct: 293 IEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 331
>gi|14348597|gb|AAK61309.1|AF285148_1 class 2 KNOTTED1-like protein MKN1-3 [Physcomitrella patens]
Length = 533
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/225 (63%), Positives = 177/225 (78%), Gaps = 5/225 (2%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA-- 124
+WE + K IV HPLY LL+AH SCLR+ TPVDQLP I+AQL+++R V +KYS +
Sbjct: 263 EWEQARDKFLIVAHPLYPDLLNAHASCLRVGTPVDQLPHIEAQLTQARHVTSKYSVLHPD 322
Query: 125 NGRVLDDK--ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ + +D+ ELDQFM Y++LL SFK+ LQQHV EA+M+CW+LEQ+L +LTGVS
Sbjct: 323 HLEITEDEKTELDQFMAQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTGVSA 382
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
GESTGATMS++DED DSD +D +D DS GFGPLVPTESER+LMERVR ELK+ELK
Sbjct: 383 GESTGATMSEEDED-YDSDYGAYDAHMDPQDSGGFGPLVPTESERTLMERVRQELKYELK 441
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QGY+ +IVD+REEILRKRRAGKLP TT++LKAWW +H+KWPYPT
Sbjct: 442 QGYRARIVDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPT 486
>gi|168040482|ref|XP_001772723.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
gi|162675948|gb|EDQ62437.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
Length = 533
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/225 (63%), Positives = 177/225 (78%), Gaps = 5/225 (2%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA-- 124
+WE + K IV HPLY LL+AH SCLR+ TPVDQLP I+AQL+++R V +KYS +
Sbjct: 263 EWEQARDKFLIVAHPLYPDLLNAHASCLRVGTPVDQLPHIEAQLTQARHVTSKYSVLHPD 322
Query: 125 NGRVLDDK--ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ + +D+ ELDQFM Y++LL SFK+ LQQHV EA+M+CW+LEQ+L +LTGVS
Sbjct: 323 HLEITEDEKTELDQFMAQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTGVSA 382
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
GESTGATMS++DED DSD +D +D DS GFGPLVPTESER+LMERVR ELK+ELK
Sbjct: 383 GESTGATMSEEDED-YDSDYGAYDAHMDPQDSGGFGPLVPTESERTLMERVRQELKYELK 441
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QGY+ +IVD+REEILRKRRAGKLP TT++LKAWW +H+KWPYPT
Sbjct: 442 QGYRARIVDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPT 486
>gi|449452384|ref|XP_004143939.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
gi|449495874|ref|XP_004159970.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
Length = 301
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/223 (65%), Positives = 173/223 (77%), Gaps = 8/223 (3%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA----NGR 127
+ KAEI HPLYEQLLSAHV+CLR+ATP+DQLP IDAQLS+S +L Y++ N
Sbjct: 34 QLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQLSQSHHILRSYASSQQHHQNAH 93
Query: 128 VL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
L + +ELD F+ Y+++L SFKEQLQQHVRVHA+EAVMAC ++E +LQ+LTGVS GE
Sbjct: 94 SLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREIENTLQALTGVSLGE 153
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
TGATMSDD ED + D + D D MGFGPL+PTESERSLMERVR ELK ELKQG
Sbjct: 154 GTGATMSDD-EDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQG 212
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+K +I D+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 213 FKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 255
>gi|302822119|ref|XP_002992719.1| KNOX transcription factor [Selaginella moellendorffii]
gi|302823878|ref|XP_002993587.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300138599|gb|EFJ05362.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300139460|gb|EFJ06200.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 304
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/222 (66%), Positives = 176/222 (79%), Gaps = 8/222 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL---D 130
KA+IV HPLYEQLL AHV+CLRIATPVDQL +ID Q+S+ +AKYS +AN ++L
Sbjct: 35 KADIVTHPLYEQLLEAHVACLRIATPVDQLSRIDGQISQCHHAIAKYSILANHQLLCGSS 94
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGESTGAT 189
+ELD FM HYV+LL SFK+QLQ HVRVHA EAVMACW+LEQSL SLT G +PGE TGAT
Sbjct: 95 KEELDHFMAHYVMLLKSFKDQLQHHVRVHAKEAVMACWELEQSLISLTAGAAPGEGTGAT 154
Query: 190 MSDDDEDQVDSDTNFFDGSLDGP----DSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
MSDD+++Q D++GFGPL+PTE+ER+LMERVR ELKHELKQGY
Sbjct: 155 MSDDEDEQQQPQQEQQQQQQSDSDYWQDNLGFGPLIPTETERTLMERVRQELKHELKQGY 214
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +IVD+REEILRKRRAGKLPGDTTS+LKAWW +H+KWPYPT
Sbjct: 215 RARIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 256
>gi|255537235|ref|XP_002509684.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223549583|gb|EEF51071.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 302
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 174/221 (78%), Gaps = 3/221 (1%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
+T + KAEI HPLYEQLLSAHVSCLR+ATP+DQLP IDAQLS+S ++ Y++ +
Sbjct: 37 QTRQLKAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLIRSYASQHPHPL 96
Query: 129 L--DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ +ELD F+ Y+++L SFK+QLQQHVRVHA+EAVMAC ++E +L +LTGV+ GE T
Sbjct: 97 SPHERQELDNFLAQYLIVLCSFKDQLQQHVRVHAVEAVMACREIENTLHALTGVTLGEGT 156
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDD ED + D + DG D MGFGPL+PTESERSLMERVR ELK ELKQG+K
Sbjct: 157 GATMSDD-EDDLQMDFSLDQSGADGHDLMGFGPLLPTESERSLMERVRQELKIELKQGFK 215
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+I D+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 216 SRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 256
>gi|302398831|gb|ADL36710.1| HD domain class transcription factor [Malus x domestica]
Length = 288
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/220 (65%), Positives = 172/220 (78%), Gaps = 5/220 (2%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA----VANGR 127
+ KAEI HPLYEQLLSAHVSCLR+ATP+DQLP IDAQLS+S +L Y++ +
Sbjct: 24 QLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQPQHAQSVS 83
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ +ELD F+ Y+++L SFKE LQQHVRVHA+EAVMAC ++E +LQ+LTGVS GE +G
Sbjct: 84 PHERQELDNFLAQYLIVLCSFKEHLQQHVRVHAVEAVMACREIESNLQALTGVSLGEVSG 143
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
ATMSDD ED + D S +G D MGFGPL+PTESERSLMERVR ELK ELKQG+K
Sbjct: 144 ATMSDD-EDDMPMDFTMDQSSGEGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKS 202
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+I D+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 203 RIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 242
>gi|297840209|ref|XP_002887986.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
lyrata]
gi|297333827|gb|EFH64245.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 174/219 (79%), Gaps = 4/219 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S ++ Y++ A G D
Sbjct: 28 QMKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLIRSYASTAVGYSNHD 87
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y+++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 88 RELDNFLAQYIMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 147
Query: 192 DDDED-QVD--SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D Q+D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 148 EDEDDIQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSR 206
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 207 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>gi|18407708|ref|NP_564805.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
gi|75309277|sp|Q9FPQ8.1|KNAT7_ARATH RecName: Full=Homeobox protein knotted-1-like 7; AltName:
Full=Protein IRREGULAR XYLEM 11; AltName: Full=Protein
KNAT7
gi|11878230|gb|AAG40858.1|AF308451_1 homeodomain transcription factor KNAT7 [Arabidopsis thaliana]
gi|109946473|gb|ABG48415.1| At1g62990 [Arabidopsis thaliana]
gi|332195913|gb|AEE34034.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
Length = 291
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 28 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 87
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 88 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 147
Query: 192 DDDED---QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 148 EDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSR 206
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 207 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>gi|26451690|dbj|BAC42940.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
Length = 284
Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 21 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 80
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 81 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 140
Query: 192 DDDED---QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 141 EDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSR 199
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 200 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 238
>gi|8493589|gb|AAF75812.1|AC011000_15 Strong similarity to Homeobox Protein HD1 from Brassica napus
gi|1170191, and contains a lactate/malate dehydrogenase
PF|00056 domain [Arabidopsis thaliana]
Length = 283
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 20 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 79
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 80 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 139
Query: 192 DDDED---QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 140 EDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSR 198
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 199 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 237
>gi|125581054|gb|EAZ21985.1| hypothetical protein OsJ_05640 [Oryza sativa Japonica Group]
Length = 281
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 158/214 (73%), Gaps = 40/214 (18%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA + HPLYE+LL AHV+CLR+ATP
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATP---------------------------------- 68
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
THYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSDD
Sbjct: 69 -----THYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDD 123
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQGYKEK+VDIR
Sbjct: 124 EDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIR 182
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EEILRKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 183 EEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 216
>gi|356539927|ref|XP_003538444.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 279
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 171/219 (78%), Gaps = 7/219 (3%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD- 130
+ KAEI HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLS+S +L Y + N L
Sbjct: 19 QLKAEIATHPLYEQLLAAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYVS-HNTLSLSP 77
Query: 131 --DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+ELD F+ Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE TGA
Sbjct: 78 HHRQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGTGA 137
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
TMSDD ED + D + S +G D MGFG +PTESERSLMERVR ELK ELKQG+K +
Sbjct: 138 TMSDD-EDDLQMDFSLDQSSAEGHDMMGFG--LPTESERSLMERVRQELKIELKQGFKSR 194
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEILRKRRAGKLPGDTTS+LK WW HAKWPYPT
Sbjct: 195 IEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 233
>gi|21618231|gb|AAM67281.1| homeodomain-containing protein HD1, putative [Arabidopsis thaliana]
Length = 283
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 20 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 79
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 80 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 139
Query: 192 DDDED---QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D SD + D S G D GFGPL+PTESE+SLMERVR ELK ELKQG+K +
Sbjct: 140 EDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESEKSLMERVRQELKLELKQGFKSR 198
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 199 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 237
>gi|255637935|gb|ACU19284.1| unknown [Glycine max]
Length = 279
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 171/219 (78%), Gaps = 7/219 (3%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD- 130
+ KAEI HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLS+S +L Y + N L
Sbjct: 19 QLKAEIATHPLYEQLLAAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYVS-RNTLSLSP 77
Query: 131 --DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+ELD F+ Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE TGA
Sbjct: 78 HHRQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGTGA 137
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
TMSDD ED + D + S +G D MGFG +PTESERSLMERVR ELK ELKQG+K K
Sbjct: 138 TMSDD-EDDLQMDFSLDQSSAEGHDMMGFG--LPTESERSLMERVRQELKIELKQGFKSK 194
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEILRKRRAGKLPGDTTS+L+ WW HAKWPYPT
Sbjct: 195 IEDVREEILRKRRAGKLPGDTTSVLENWWQQHAKWPYPT 233
>gi|1170191|sp|P46606.1|HD1_BRANA RecName: Full=Homeobox protein HD1
gi|453949|emb|CAA82314.1| homeodomain-containing protein [Brassica napus]
gi|1090522|prf||2019252A homeobox protein
Length = 294
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 173/220 (78%), Gaps = 5/220 (2%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+Y+QLL+AHV+CLR+ATP+DQLP I+AQLS S +L Y++ A G D
Sbjct: 30 QMKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFSHHD 89
Query: 132 K-ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATM
Sbjct: 90 RQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATM 149
Query: 191 SDDDED-QVD--SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
S+D++D Q+D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K
Sbjct: 150 SEDEDDLQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKS 208
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 209 RIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 248
>gi|357481773|ref|XP_003611172.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|132424657|gb|ABO33481.1| class II KNOX homeobox transcription factor [Medicago truncatula]
gi|355512507|gb|AES94130.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 292
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 173/224 (77%), Gaps = 5/224 (2%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E + KAEI HPLYEQLLSAHV+CLR+ATP+DQLP IDAQLS+S +L Y + +
Sbjct: 23 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSL 82
Query: 129 L--DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE +
Sbjct: 83 SPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGS 142
Query: 187 GATMSDDDEDQVDSDTNFFDGS---LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
GATMSDD+++Q+ D + S D MG GPL+PTESERSLMERVR ELK ELKQ
Sbjct: 143 GATMSDDEDEQLQMDYGLDNQSSGGGGDHDMMGLGPLLPTESERSLMERVRQELKIELKQ 202
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
G+K +I D+REEILRKRRAGKLPGDTTS+LK WW HAKWPYPT
Sbjct: 203 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 246
>gi|357481771|ref|XP_003611171.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355512506|gb|AES94129.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 305
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 173/224 (77%), Gaps = 5/224 (2%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E + KAEI HPLYEQLLSAHV+CLR+ATP+DQLP IDAQLS+S +L Y + +
Sbjct: 23 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSL 82
Query: 129 L--DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE +
Sbjct: 83 SPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGS 142
Query: 187 GATMSDDDEDQVDSDTNFFDGS---LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
GATMSDD+++Q+ D + S D MG GPL+PTESERSLMERVR ELK ELKQ
Sbjct: 143 GATMSDDEDEQLQMDYGLDNQSSGGGGDHDMMGLGPLLPTESERSLMERVRQELKIELKQ 202
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
G+K +I D+REEILRKRRAGKLPGDTTS+LK WW HAKWPYPT
Sbjct: 203 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 246
>gi|225426739|ref|XP_002282231.1| PREDICTED: homeobox protein knotted-1-like 7 [Vitis vinifera]
gi|297742619|emb|CBI34768.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 179/221 (80%), Gaps = 6/221 (2%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--GRVL 129
+ K EIV HPLYEQLL+AHV+CLR+ATP+DQLP IDAQL++S +L Y++ + G L
Sbjct: 26 QLKGEIVTHPLYEQLLAAHVACLRVATPIDQLPLIDAQLTQSHHLLRSYASQQHHHGNSL 85
Query: 130 ---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ +ELD F++ Y+L+L +FKEQLQQHVRVHA+EAVMAC ++EQ+LQ+LTGVS GE +
Sbjct: 86 SPHERQELDNFLSQYLLVLCTFKEQLQQHVRVHAVEAVMACREIEQTLQALTGVSLGEGS 145
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDD+E+ + D + G DG D MGFGPL+PTESER+LMERVR ELK ELKQG+K
Sbjct: 146 GATMSDDEEE-MQMDFSLDQGGGDGHDMMGFGPLLPTESERTLMERVRQELKIELKQGFK 204
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 205 SRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPT 245
>gi|226532656|ref|NP_001151200.1| LOC100284833 [Zea mays]
gi|195644982|gb|ACG41959.1| homeobox protein HD1 [Zea mays]
Length = 315
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 168/217 (77%), Gaps = 3/217 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + + D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHSPFLXPHDK 113
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+LD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTGV+ E TGATMS
Sbjct: 114 HDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMS 173
Query: 192 DDDEDQVDS-DTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
++DED+ + D DG D MGFGPL+PT+SERSLM+RVR ELK ELKQG+K +I
Sbjct: 174 EEDEDEAPMLEVGLVDMGSDGHDMMGFGPLLPTDSERSLMDRVRQELKIELKQGFKSRIE 233
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 234 DVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPT 270
>gi|350535332|ref|NP_001233933.1| homeobox 2 protein [Solanum lycopersicum]
gi|4098246|gb|AAD00253.1| homeobox 2 protein [Solanum lycopersicum]
Length = 310
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 170/223 (76%), Gaps = 9/223 (4%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-- 129
+ K+EI HPLYEQLLSAHV+CLR+ TP+DQLP IDAQL++S ++L Y++ +
Sbjct: 44 QLKSEIATHPLYEQLLSAHVACLRVRTPIDQLPLIDAQLTQSHNLLRSYASSQQQQQQHS 103
Query: 130 ----DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGES 185
+ +ELD F+ Y+L+L SFKEQLQQHVRVHA+EAVMAC ++EQ+LQ LTG + GE
Sbjct: 104 LSHHERQELDNFLAQYLLVLCSFKEQLQQHVRVHAVEAVMACREIEQNLQLLTGATLGEG 163
Query: 186 TGATMSDD-DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
TGATMSDD DE Q+D + G D D MG G +PTESERSLMERVR ELK ELKQG
Sbjct: 164 TGATMSDDEDELQMDFSLDVSGG--DAHDLMGMGFGLPTESERSLMERVRQELKIELKQG 221
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ +I D+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 222 FRSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 264
>gi|218191994|gb|EEC74421.1| hypothetical protein OsI_09790 [Oryza sativa Indica Group]
gi|222624111|gb|EEE58243.1| hypothetical protein OsJ_09228 [Oryza sativa Japonica Group]
Length = 306
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 165/216 (76%), Gaps = 2/216 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 46 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 105
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS
Sbjct: 106 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 165
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 166 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 225
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 226 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 261
>gi|75306683|sp|Q94LW3.1|KNOS3_ORYSJ RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=Homeobox protein HOS66
gi|14149141|dbj|BAB55660.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|108705925|gb|ABF93720.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
gi|108705927|gb|ABF93722.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
Length = 314
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 165/216 (76%), Gaps = 2/216 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS
Sbjct: 114 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 173
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 174 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 233
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 234 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 269
>gi|115450409|ref|NP_001048805.1| Os03g0123500 [Oryza sativa Japonica Group]
gi|113547276|dbj|BAF10719.1| Os03g0123500, partial [Oryza sativa Japonica Group]
Length = 287
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 165/216 (76%), Gaps = 2/216 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 27 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 86
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS
Sbjct: 87 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 146
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 147 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 206
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 207 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 242
>gi|226531836|ref|NP_001150419.1| homeobox protein HD1 [Zea mays]
gi|195639114|gb|ACG39025.1| homeobox protein HD1 [Zea mays]
gi|414864470|tpg|DAA43027.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 310
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 166/216 (76%), Gaps = 3/216 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 51 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 110
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+LD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS
Sbjct: 111 HDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 170
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+D+++ + GS DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 171 EDEDEAPMLEVGLDMGS-DGHDMMGFGPLMPTDSERSLMERVRQELKMELKQGFKSRIED 229
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 230 VREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPT 265
>gi|326526697|dbj|BAK00737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 168/218 (77%), Gaps = 4/218 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K E+ HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 53 KGEMAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSNGLLHSYAAHHRPFLSPHDK 112
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG S E TGATMS
Sbjct: 113 QELDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGASLEEGTGATMS 172
Query: 192 DDDEDQ--VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
+D+++ + + D S +G D MGFGPLVPT++ERSLMERVR ELK ELKQG+K +I
Sbjct: 173 EDEDEGPLMIMEAAPLDMSSNGHDMMGFGPLVPTDTERSLMERVRQELKIELKQGFKSRI 232
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
D+REEILRKRRAGKLPGDTT++LK WW HAKWPYPT
Sbjct: 233 GDVREEILRKRRAGKLPGDTTTILKQWWQEHAKWPYPT 270
>gi|115444643|ref|NP_001046101.1| Os02g0182800 [Oryza sativa Japonica Group]
gi|14149137|dbj|BAB55658.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|113535632|dbj|BAF08015.1| Os02g0182800, partial [Oryza sativa Japonica Group]
Length = 212
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 142/156 (91%), Gaps = 1/156 (0%)
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMS
Sbjct: 1 EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMS 60
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
DD+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQGYKEK+VD
Sbjct: 61 DDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVD 119
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
IREEILRKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 120 IREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 155
>gi|371767700|gb|AEX56205.1| class II KNOX protein [Gymnadenia odoratissima]
Length = 168
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/150 (87%), Positives = 138/150 (92%)
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ 197
M HYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTG+SPGE TGATMSDDD+DQ
Sbjct: 1 MAHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGISPGEGTGATMSDDDDDQ 60
Query: 198 VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEIL 257
D +TNF+DGS DG DSMGFGPL+PTESERSLMERVR ELKHELK GYKEKIVD+REEIL
Sbjct: 61 ADGETNFYDGSFDGSDSMGFGPLIPTESERSLMERVRQELKHELKNGYKEKIVDVREEIL 120
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRRAGKLP DTTS LKAWW SHAKWPYPT
Sbjct: 121 RKRRAGKLPVDTTSTLKAWWQSHAKWPYPT 150
>gi|357114296|ref|XP_003558936.1| PREDICTED: homeobox protein knotted-1-like 3-like [Brachypodium
distachyon]
Length = 260
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 164/212 (77%), Gaps = 4/212 (1%)
Query: 80 HPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DDKELDQF 137
HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D ++LD F
Sbjct: 4 HPLCEQLVAAHVGCLRVATPIDHLPIIDAQLAQSGGLLHSYAAHHRPFLSPHDKQDLDSF 63
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDED- 196
+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS+D+E+
Sbjct: 64 LAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEEEP 123
Query: 197 -QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREE 255
+ D S +G D MGFGPLVPT+SERSLMERVR ELK ELKQG+K +I D+REE
Sbjct: 124 QTIMEAAAAMDMSSNGHDMMGFGPLVPTDSERSLMERVRQELKIELKQGFKSRIGDVREE 183
Query: 256 ILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 184 ILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 215
>gi|371767702|gb|AEX56206.1| class II KNOX protein [Gymnadenia rhellicani]
Length = 166
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 130/148 (87%), Positives = 137/148 (92%)
Query: 140 HYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVD 199
HYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTG+SPGE TGATMSDDD+DQ D
Sbjct: 1 HYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGISPGEGTGATMSDDDDDQAD 60
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
+TNF+DGS DG DSMGFGPL+PTESERSLMERVR ELKHELK GYKEKIVD+REEILRK
Sbjct: 61 GETNFYDGSFDGSDSMGFGPLIPTESERSLMERVRQELKHELKNGYKEKIVDVREEILRK 120
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RRAGKLP DTTS LKAWW SHAKWPYPT
Sbjct: 121 RRAGKLPVDTTSTLKAWWQSHAKWPYPT 148
>gi|297608351|ref|NP_001061467.2| Os08g0292900 [Oryza sativa Japonica Group]
gi|255678331|dbj|BAF23381.2| Os08g0292900 [Oryza sativa Japonica Group]
Length = 194
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 126/150 (84%), Positives = 136/150 (90%), Gaps = 2/150 (1%)
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ 197
MTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATMSD ++DQ
Sbjct: 1 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQ 60
Query: 198 VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEIL 257
DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++DIREEIL
Sbjct: 61 ADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLIDIREEIL 118
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRRAGKLPGDTTS LKAWW SHAKWPYPT
Sbjct: 119 RKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 148
>gi|218200874|gb|EEC83301.1| hypothetical protein OsI_28664 [Oryza sativa Indica Group]
gi|222640286|gb|EEE68418.1| hypothetical protein OsJ_26781 [Oryza sativa Japonica Group]
Length = 212
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 139/157 (88%), Gaps = 2/157 (1%)
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
DK ++ THYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATM
Sbjct: 2 DKYYEEDWTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 61
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD ++DQ DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++
Sbjct: 62 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 119
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
DIREEILRKRRAGKLPGDTTS LKAWW SHAKWPYPT
Sbjct: 120 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 156
>gi|238005954|gb|ACR34012.1| unknown [Zea mays]
Length = 194
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/150 (81%), Positives = 136/150 (90%), Gaps = 1/150 (0%)
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ 197
MTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSDD+++Q
Sbjct: 1 MTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQ 60
Query: 198 VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEIL 257
VDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+VDIREEI+
Sbjct: 61 VDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKNELKQGYKEKLVDIREEIM 119
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 120 RKRRAGKLPGDTASVLKAWWQAHSKWPYPT 149
>gi|168026109|ref|XP_001765575.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
gi|162683213|gb|EDQ69625.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
Length = 518
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/227 (58%), Positives = 171/227 (75%), Gaps = 6/227 (2%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+WE ++ +A IV HPLY ++L H +CLR+ TPVDQLP I+AQL+++ +++ KY A+ +
Sbjct: 244 EWEEIRNRALIVNHPLYPEMLMNHAACLRVGTPVDQLPSIEAQLAQAPNIIEKYRALHDQ 303
Query: 127 RVL--DDK-ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
+ D+K ELD+FMT Y LL FK+ LQ HV EA++ CW+LEQ+L +LTGVSPG
Sbjct: 304 VDITEDEKVELDRFMTEYTALLGDFKDVLQHHVYTDVAEAMIGCWELEQALHALTGVSPG 363
Query: 184 ESTGATMSDDDEDQVDSDT---NFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
E +GATMSD D+DQ +D S+D DS G+GPLVPTE+ERSLMERVR ELKHE
Sbjct: 364 EGSGATMSDVDDDQDYDSDYAGTAYDQSMDYHDSGGYGPLVPTETERSLMERVRQELKHE 423
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LKQGY+ KI D+REEILRKRRAGKLP TT++LKAWW +H+KWPYPT
Sbjct: 424 LKQGYRSKIEDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPT 470
>gi|371767704|gb|AEX56207.1| class II KNOX protein [Orchis anthropophora]
gi|371767706|gb|AEX56208.1| class II KNOX protein [Orchis italica]
Length = 166
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 139/148 (93%)
Query: 140 HYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVD 199
HYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGVSPGE TGATMSDDD+DQ D
Sbjct: 1 HYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDDDDQED 60
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
S+TN +DGSLD D+MGFGPLVPTESERSLMERVRHELKHELKQ YKEKIVDIREEILRK
Sbjct: 61 SETNIYDGSLDVHDTMGFGPLVPTESERSLMERVRHELKHELKQDYKEKIVDIREEILRK 120
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 121 RRAGKLPGDTTSTLKAWWQSHSKWPYPT 148
>gi|371767697|gb|AEX56204.1| class II KNOX protein, partial [Dactylorhiza viridis]
Length = 166
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/148 (89%), Positives = 139/148 (93%)
Query: 140 HYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVD 199
HYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGVSPGE TGATMSDDD+DQ D
Sbjct: 1 HYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDDDDQED 60
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
S+TN +DGSLD D+MG+GPLVPTESERSLMERVRHELKHELKQ YKEKIVDIREEILRK
Sbjct: 61 SETNIYDGSLDVHDTMGYGPLVPTESERSLMERVRHELKHELKQDYKEKIVDIREEILRK 120
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 121 RRAGKLPGDTTSTLKAWWQSHSKWPYPT 148
>gi|222635984|gb|EEE66116.1| hypothetical protein OsJ_22154 [Oryza sativa Japonica Group]
Length = 256
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/151 (79%), Positives = 136/151 (90%), Gaps = 1/151 (0%)
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDED 196
+ THYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SP E +GATMSDD+++
Sbjct: 47 YQTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDN 106
Query: 197 QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEI 256
QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELKQGY+EK+VDIREEI
Sbjct: 107 QVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEI 165
Query: 257 LRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 166 LRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 196
>gi|224092536|ref|XP_002309651.1| predicted protein [Populus trichocarpa]
gi|222855627|gb|EEE93174.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 114/127 (89%), Positives = 121/127 (95%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVMACW++EQSLQSLTGVSPGE TGATMSDDDEDQVDS+ N FDGSL+G D+MGFGPL
Sbjct: 1 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSEANMFDGSLEGVDTMGFGPL 60
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
VPTESERSLMERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH
Sbjct: 61 VPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 120
Query: 281 AKWPYPT 287
+KWPYPT
Sbjct: 121 SKWPYPT 127
>gi|28564620|dbj|BAC57787.1| OSH45 [Oryza sativa Japonica Group]
gi|38175509|dbj|BAD01204.1| OSH45 [Oryza sativa Japonica Group]
Length = 181
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/127 (81%), Positives = 114/127 (89%), Gaps = 2/127 (1%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVMACW+LEQ+LQSLTG SPGE TGATMSD ++DQ DS+ N +D SLDG D+MGFG
Sbjct: 1 MEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG-- 58
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
+PTESERSLMERVR ELKHELKQGYKEK++DIREEILRKRRAGKLPGDTTS LKAWW SH
Sbjct: 59 LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSH 118
Query: 281 AKWPYPT 287
AKWPYPT
Sbjct: 119 AKWPYPT 125
>gi|1805619|dbj|BAA08554.1| OSH45 [Oryza sativa Japonica Group]
Length = 171
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/127 (81%), Positives = 114/127 (89%), Gaps = 2/127 (1%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVMACW+LEQ+LQSLTG SPGE TGATMSD ++DQ DS+ N +D SLDG D+MGFG
Sbjct: 1 MEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG-- 58
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
+PTESERSLMERVR ELKHELKQGYKEK++DIREEILRKRRAGKLPGDTTS LKAWW SH
Sbjct: 59 LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSH 118
Query: 281 AKWPYPT 287
AKWPYPT
Sbjct: 119 AKWPYPT 125
>gi|14090233|dbj|BAA77821.2| HOS58 [Oryza sativa Japonica Group]
Length = 183
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/127 (80%), Positives = 115/127 (90%), Gaps = 1/127 (0%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVM CW+LEQSLQSLTG SPGE TGATMSDD+++QVDS+ N FDG+ DG D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPL 59
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
+ TE ERSL+ERVRHELK+ELKQGYKEK+VDIREEILRKRRAGKLPGDT S+LKAWW +H
Sbjct: 60 MLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAH 119
Query: 281 AKWPYPT 287
+KWPYPT
Sbjct: 120 SKWPYPT 126
>gi|323388713|gb|ADX60161.1| ORPHAN transcription factor [Zea mays]
Length = 171
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 114/127 (89%), Gaps = 1/127 (0%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVM CW+LEQSLQSLTG SPGE TGATMSDD+++QVDS+ N FDG+ DG D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPL 59
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
+ TE ERSL+ERVR ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H
Sbjct: 60 MLTEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAH 119
Query: 281 AKWPYPT 287
+KWPYPT
Sbjct: 120 SKWPYPT 126
>gi|85361943|emb|CAJ58045.1| KNOX family class 2 homeodomain protein [Zea mays]
Length = 171
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 113/127 (88%), Gaps = 1/127 (0%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVM CW+LEQSLQSLTG SPGE TG TMSDD+++QVDS+ N FDG+ DG D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGGTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPL 59
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
+ TE ERSL+ERVR ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H
Sbjct: 60 ILTEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAH 119
Query: 281 AKWPYPT 287
+KWPYPT
Sbjct: 120 SKWPYPT 126
>gi|413957111|gb|AFW89760.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 191
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Query: 143 LLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDS-D 201
+LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTGV+ E TGATMS++DED+ +
Sbjct: 1 MLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMSEEDEDEAPMLE 60
Query: 202 TNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 261
D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D+REEILRKRR
Sbjct: 61 VGLVDMGSDGHDMMGFGPLLPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRR 120
Query: 262 AGKLPGDTTSLLKAWWLSHAKWPYPT 287
AGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 121 AGKLPGDTTSILKQWWQQHSKWPYPT 146
>gi|14090235|dbj|BAA77822.2| HOS59 [Oryza sativa Japonica Group]
Length = 178
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 114/127 (89%), Gaps = 1/127 (0%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPL 220
MEAVMACW+LEQ+LQSLTG SP E +GATMSDD+++QVDS++N FDG+ DG D MGFGPL
Sbjct: 1 MEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPL 59
Query: 221 VPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
+ TE ERSL+ERVR ELKHELKQGY+EK+VDIREEILRKRRAGKLPGDT S LKAWW +H
Sbjct: 60 MLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAH 119
Query: 281 AKWPYPT 287
+KWPYPT
Sbjct: 120 SKWPYPT 126
>gi|218190193|gb|EEC72620.1| hypothetical protein OsI_06117 [Oryza sativa Indica Group]
Length = 250
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 133/175 (76%), Gaps = 6/175 (3%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV--ANGRVL-- 129
KA + HPL +LL+A V+CLR+ATPV QLP++D S S + ++ ANG L
Sbjct: 43 KAAVAAHPLSARLLAAPVACLRVATPVAQLPRLDEADSASARLPSQPPPTTDANGGPLRW 102
Query: 130 -DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+ L +THYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGA
Sbjct: 103 RGARPLHVVVTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGA 162
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
TMSDD+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQ
Sbjct: 163 TMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQ 216
>gi|414864471|tpg|DAA43028.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 198
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Query: 140 HYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVD 199
Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS+D+++
Sbjct: 7 QYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDEAPM 66
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
+ GS DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D+REEILRK
Sbjct: 67 LEVGLDMGS-DGHDMMGFGPLMPTDSERSLMERVRQELKMELKQGFKSRIEDVREEILRK 125
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 126 RRAGKLPGDTTSILKQWWQEHSKWPYPT 153
>gi|4887620|dbj|BAA77823.1| HOS66 [Oryza sativa Japonica Group]
gi|108705928|gb|ABF93723.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
Length = 196
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 119/148 (80%)
Query: 140 HYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVD 199
Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS+D+++
Sbjct: 4 QYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAP 63
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D+REEILRK
Sbjct: 64 MLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRK 123
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 124 RRAGKLPGDTTTILKQWWQQHSKWPYPT 151
>gi|108705926|gb|ABF93721.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
gi|215765705|dbj|BAG87402.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 191
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 118/146 (80%)
Query: 142 VLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSD 201
++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS+D+++
Sbjct: 1 MMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPML 60
Query: 202 TNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRR 261
D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D+REEILRKRR
Sbjct: 61 EGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRR 120
Query: 262 AGKLPGDTTSLLKAWWLSHAKWPYPT 287
AGKLPGDTT++LK WW H+KWPYPT
Sbjct: 121 AGKLPGDTTTILKQWWQQHSKWPYPT 146
>gi|371767694|gb|AEX56203.1| class II KNOX protein [Linaria vulgaris]
Length = 171
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 123/152 (80%), Gaps = 5/152 (3%)
Query: 141 YVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVD- 199
Y+L+L SF+EQLQQHVRVHA+EAV+AC ++E +LQSLTGV+ GE +GATMSDD+++ +
Sbjct: 2 YMLVLCSFREQLQQHVRVHAVEAVVACREIEHNLQSLTGVALGEGSGATMSDDEDEMMMH 61
Query: 200 ----SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREE 255
S + G D D MGFGPL+PTESERSLM+RVR ELK ELKQG+K +I D+REE
Sbjct: 62 QMELSHLDHQSGPHDAHDLMGFGPLLPTESERSLMDRVRQELKIELKQGFKSRIEDVREE 121
Query: 256 ILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 122 ILRKRRAGKLPGDTTSVLKNWWEQHSKWPYPT 153
>gi|294460668|gb|ADE75908.1| unknown [Picea sitchensis]
Length = 174
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 114/128 (89%), Gaps = 1/128 (0%)
Query: 161 MEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMG-FGP 219
MEAVMACW+LEQSL +LTGVSPGE TGATMSDD++DQ DSDTN FD LDG D +G FGP
Sbjct: 1 MEAVMACWELEQSLHTLTGVSPGEGTGATMSDDEDDQADSDTNLFDLGLDGQDGVGSFGP 60
Query: 220 LVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLS 279
L+PTE+ERSLMERVR ELKHELKQGY+ +I DIREEILRKRRAGKLPGDTTS+LK WW +
Sbjct: 61 LIPTENERSLMERVRQELKHELKQGYRSRIEDIREEILRKRRAGKLPGDTTSVLKNWWQA 120
Query: 280 HAKWPYPT 287
H+KWPYPT
Sbjct: 121 HSKWPYPT 128
>gi|224163293|ref|XP_002338542.1| predicted protein [Populus trichocarpa]
gi|222872740|gb|EEF09871.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/111 (81%), Positives = 101/111 (90%)
Query: 177 LTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE 236
+ GVSPGE TGATMSDD++DQ +SDTNF DG+LDG D+MGFGPLVPTE+ERSLMERVR E
Sbjct: 1 MIGVSPGEGTGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERSLMERVRQE 60
Query: 237 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LKHE KQ YKEKIVDIREEILRKRRAGKLPGDTTS LKAWW +H+KWPYP+
Sbjct: 61 LKHEFKQDYKEKIVDIREEILRKRRAGKLPGDTTSHLKAWWQTHSKWPYPS 111
>gi|388520497|gb|AFK48310.1| unknown [Medicago truncatula]
Length = 160
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 104/132 (78%), Gaps = 2/132 (1%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E + KAEI HPLYEQLLSAHV+CLR+ATP+DQLP IDAQLS+S +L Y + +
Sbjct: 22 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSL 81
Query: 129 L--DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVMAC D+E +LQ+LTGVS GE +
Sbjct: 82 SPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGS 141
Query: 187 GATMSDDDEDQV 198
GATMSDD+++Q+
Sbjct: 142 GATMSDDEDEQL 153
>gi|33333540|gb|AAQ11886.1| knotted 6 [Hordeum vulgare]
Length = 149
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Query: 188 ATMSDDDEDQ--VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
ATMS+D+++ + + D S +G D MGFGPLVPT++ERSLMERVR ELK ELKQG+
Sbjct: 3 ATMSEDEDEGPLMIMEAAPLDMSSNGHDMMGFGPLVPTDTERSLMERVRQELKIELKQGF 62
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K +I D+REEILRKRRAGKLPGDTT++LK WW HAKWPYPT
Sbjct: 63 KSRIGDVREEILRKRRAGKLPGDTTTILKQWWQEHAKWPYPT 104
>gi|25446694|gb|AAN74841.1| Putative homeobox gene [Oryza sativa Japonica Group]
Length = 143
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 77/98 (78%)
Query: 190 MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
MS+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I
Sbjct: 1 MSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRI 60
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
D+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 61 EDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 98
>gi|25446693|gb|AAN74840.1| Putative KNOX family class 2 homeodomain protein [Oryza sativa
Japonica Group]
Length = 171
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 82/109 (75%), Gaps = 6/109 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL---- 129
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + R
Sbjct: 46 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA--HHRPFLSPH 103
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
D +ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LT
Sbjct: 104 DKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLT 152
>gi|356554245|ref|XP_003545459.1| PREDICTED: uncharacterized protein LOC100776775 [Glycine max]
Length = 395
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 61/71 (85%)
Query: 173 SLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMER 232
S+ L VSPGE TGATMSDD+++QV SD N FDG+LDGPDSMGFGPL+PTE+ERSL ER
Sbjct: 21 SVSVLRRVSPGEGTGATMSDDEDEQVGSDANLFDGALDGPDSMGFGPLIPTENERSLTER 80
Query: 233 VRHELKHELKQ 243
VR E+KHELKQ
Sbjct: 81 VRPEVKHELKQ 91
>gi|254749398|dbj|BAH86595.1| class2 knotted-like homeobox [Selaginella uncinata]
Length = 111
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 60/64 (93%)
Query: 224 ESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKW 283
E+ER+LMERVRHELK ELKQGYK KI D+REEILRKRRAGKLPGDTTS+LK+WW +H+KW
Sbjct: 2 ETERTLMERVRHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKSWWHAHSKW 61
Query: 284 PYPT 287
PYP+
Sbjct: 62 PYPS 65
>gi|224092538|ref|XP_002309652.1| hypothetical protein POPTRDRAFT_654197 [Populus trichocarpa]
gi|222855628|gb|EEE93175.1| hypothetical protein POPTRDRAFT_654197 [Populus trichocarpa]
Length = 227
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 65/75 (86%), Gaps = 2/75 (2%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN- 125
+W+ KCKA+I+ HPLY+QLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ +
Sbjct: 152 NWQNAKCKADILAHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQQVVAKYSALGSH 211
Query: 126 -GRVLDDKELDQFMT 139
G V DDKELDQFM
Sbjct: 212 QGLVPDDKELDQFMV 226
>gi|374255987|gb|AEZ00855.1| putative knotted-like homeodomain protein, partial [Elaeis
guineensis]
Length = 109
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/52 (94%), Positives = 50/52 (96%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS LKAWW SH+KWPYPT
Sbjct: 1 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSTLKAWWQSHSKWPYPT 52
>gi|6016216|sp|P56660.1|KNOX2_MAIZE RecName: Full=Homeobox protein knotted-1-like 2
Length = 88
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
VR ELKHELKQGY++K+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 55
>gi|1045046|emb|CAA63132.1| KNAT5 homeobox protein [Arabidopsis thaliana]
Length = 104
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKHELKQG+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPT
Sbjct: 2 ELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 53
>gi|6016222|sp|P56664.1|KNOX6_MAIZE RecName: Full=Homeobox protein knotted-1-like 6
gi|6016223|sp|P56665.1|KNOX7_MAIZE RecName: Full=Homeobox protein knotted-1-like 7
gi|913144|gb|AAB33490.1| KNOX6=class 2 knotted1-like homeobox gene knox6 product
{homeodomain} [maize, Peptide Partial, 85 aa]
gi|913145|gb|AAB33491.1| KNOX7=class 1 knotted1-like homeobox gene knox7 product
{homeodomain} [maize, Peptide Partial, 85 aa]
Length = 85
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 52
>gi|357113910|ref|XP_003558744.1| PREDICTED: homeobox protein knotted-1-like 8-like [Brachypodium
distachyon]
Length = 345
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 60/277 (21%)
Query: 11 RLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWET 70
RL L +NPPP T + HH++ + + EA
Sbjct: 52 RLALHQLLSNPPPST-----PQRGHHKDGEISPGPDAEA--------------------- 85
Query: 71 VKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD 130
KA+I+ HPLY LL++++ C ++ P D L ++ A ++ D A+ +D
Sbjct: 86 --VKAKIMAHPLYSPLLASYLDCHKVGAPPDVLDRLSAVAAKQLDAAAERRRHREPPRVD 143
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
ELDQFM Y +L ++E+L + + EA +E L S+T S E GA
Sbjct: 144 -PELDQFMEAYCNMLAKYREELARPI----WEATEFFRSVETQLDSITADSNCE--GAGS 196
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S+DD D ++ + P+ +R ELKH+L + Y +
Sbjct: 197 SEDDLDTSCAEE-----------------IDPSAEDR--------ELKHQLLRKYGGYVG 231
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R+E ++R+ GKLP + L WW H KWPYP+
Sbjct: 232 SLRQEFCKRRKKGKLPKEARQKLLQWWELHCKWPYPS 268
>gi|6016214|sp|P56659.1|KNOX1_MAIZE RecName: Full=Homeobox protein knotted-1-like 1
Length = 88
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 48/55 (87%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
VR ELK ELKQG+K +I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPT 55
>gi|300676315|gb|ADK26527.1| HERMIT-like protein 1 [Petunia x hybrida]
Length = 322
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 53 NKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR 112
+K + S+ N + + ET+ +A I HPLY +LL +++ C ++ P + + +D + +
Sbjct: 57 DKIGTTSSSNLQEDQDETMNIRANISSHPLYPKLLRSYIDCQKVGAPSEIVNMLD-NIVQ 115
Query: 113 SRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQ 172
DV K S N R+ DD ELD+FM Y +L FK L + EA + ++E
Sbjct: 116 ENDVYKKSSTALN-RLTDDPELDEFMETYCEVLAKFKSDLARPFN----EATIFLNNIET 170
Query: 173 SLQSLTGVSPGESTGATMSDD--DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
L +L ++ +T SD+ E + ++D DG E++ +
Sbjct: 171 QLSNL-WINAAPTTSNITSDELGAEPEEENDITGADG----------------EADEKIN 213
Query: 231 ERVRH-ELKHELKQGYKEKIVDIREEILRKR-RAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ R E+K +L + Y I +++E+ K + GKLP + +L WW H KWPYPT
Sbjct: 214 DMCRESEIKDKLMRKYSGYIRSLKQEVCNKNNKKGKLPKEARQILLNWWTCHYKWPYPT 272
>gi|285804239|gb|ADC35600.1| class I KNOX homeobox transcription factor STM-like 2 [Prunus
persica]
Length = 383
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA+I+ HP Y +LL+++++C ++ P + + +++ + + + S+ + L +D
Sbjct: 124 KAKIMAHPHYHRLLASYINCQKVGAPPEVVARLERACASAASIGQMMSSSSGSGCLGEDP 183
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST----GA 188
LDQFM Y +L ++++L + + EA++ +E ++LT S +S G
Sbjct: 184 ALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSDSAVCGDGL 239
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ E++VD + NF D P +R ELK +L + Y
Sbjct: 240 DRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSGY 276
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E +++R+ GKLP + L WW H KWPYP+ S+
Sbjct: 277 LGSLKQEFMKERKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 318
>gi|358249166|ref|NP_001239748.1| uncharacterized protein LOC100803095 [Glycine max]
gi|255639822|gb|ACU20204.1| unknown [Glycine max]
Length = 311
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 27/242 (11%)
Query: 48 EAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID 107
EAP+ +NN+ ++ + D K +I HPLY LLSA++ C ++ P P++
Sbjct: 37 EAPQPQENNNVTDSSS---DMSDRIIKIQIANHPLYPDLLSAYIECQKVGAP----PELA 89
Query: 108 AQLSRSRDVLAKYSAVANGR--VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
L + + + S N R + + ELD FM + +L+ +KE+L + EA +
Sbjct: 90 CLL----EEIGRESHRMNARREIGEGPELDHFMETFCQVLHRYKEELSRPFN----EATL 141
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTES 225
D+E L +L + +S+ D+ S+ G ++ + P++
Sbjct: 142 FLGDMESQLSNLCNETLTKSSDNNNRSDEVASGASEEELSCGEMEAFEDNVSSVTCPSD- 200
Query: 226 ERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPY 285
LK L + Y +R+E L++R+ GKLP D L WW +H +WPY
Sbjct: 201 ---------QRLKEMLLRKYSGHFSGLRKEFLKRRKKGKLPKDARMALMGWWNTHHRWPY 251
Query: 286 PT 287
PT
Sbjct: 252 PT 253
>gi|4589880|dbj|BAA76903.1| homeobox 9 [Nicotiana tabacum]
Length = 322
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 26/232 (11%)
Query: 58 ASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI--DAQLSRSRD 115
S+ N + ED +A+I HPLY +LL ++ C ++ P D++ + + + D
Sbjct: 65 TSSSNLQLEDHPETDIRAKISSHPLYPKLLRTYIDCHKVGAPSDEIVDMLDNINIVHEND 124
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+ + + R+ DD ELD FM Y +L FK L++ EA D+E L
Sbjct: 125 LSRR-----SNRLSDDSELDAFMETYCDVLAKFKSDLERPFN----EATTFLNDIETQLT 175
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH 235
+L +T + +SD+ + + D S G ++ + M R +
Sbjct: 176 NLCAAP--ATTISNISDEGAAGTEEEEEVADTSGGGGNT-------------NDMCRSEN 220
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E+K +L + Y I +++E +K + GKLP + +L WW +H KWPYPT
Sbjct: 221 EIKDKLMRKYSGYISSLKQEFSKKNKKGKLPREARQILLNWWTTHYKWPYPT 272
>gi|326524884|dbj|BAK04378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 42/219 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-----V 128
KA+I+ HPLY LL++++ C ++ P + L ++ A V AK A +GR
Sbjct: 80 KAKIMAHPLYSPLLASYLDCQKVGAPPEVLERLSA-------VAAKLDA-GHGRGQHEAP 131
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
D ELDQFM Y +L ++E+L + ++ EA +E L S+T GA
Sbjct: 132 RPDPELDQFMEAYCNMLVKYREELARPIQ----EATEFFKSVETQLDSITFTDSTNCEGA 187
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
S+DD D S D S + ELKH+L + Y
Sbjct: 188 GSSEDDLDA--SCVEEIDPSAED-----------------------KELKHQLLRKYGGY 222
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E ++R+ GKLP + L WW H+KWPYP+
Sbjct: 223 VGSLRQEFCKRRKKGKLPKEARQKLLHWWELHSKWPYPS 261
>gi|164454387|dbj|BAF96740.1| knotted-like homeobox transcription factor MKN4 [Physcomitrella
patens]
Length = 495
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 41 DDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPV 100
D DDDE+ N A++ E+ E + IV HPLY +L+ AH+S +I P
Sbjct: 196 DRDDDEK--------NKATDRGKLPENEEEQLLRDAIVDHPLYPELVVAHISIFKIGAPK 247
Query: 101 DQLPKID---AQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVR 157
L K+D + R + + ++ + + D LD FM Y+ LL F+E L+
Sbjct: 248 GLLIKLDEMEKKFQRFQYGESSWNVLHVTKFGQDPSLDFFMRSYIDLLTKFREDLENPYN 307
Query: 158 VHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGF 217
A DLE +P D+ED SD D S D D
Sbjct: 308 KFAQYKDKVTKDLEDLCGHYIETTP----------DEEDNFGSDIGTKDMSQDLNDLEIL 357
Query: 218 GP---LVPTESERSLM---ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 271
G + + + S++ + ELK L+ Y + I ++ E R R+ GKLP +
Sbjct: 358 GEENLMYTADIDESIVIDPDAADEELKKMLRLKYGKHIAGLKAEFNRVRKKGKLPTNARQ 417
Query: 272 LLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
+LK W+ H+ WPYP S + + +C LN
Sbjct: 418 ILKDWFSRHSYWPYP------SEMEKAYLQRLCGLN 447
>gi|14456343|gb|AAK62559.1|AF284817_1 class 1 KNOTTED1-like protein MKN4 [Physcomitrella patens]
Length = 488
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 117/276 (42%), Gaps = 33/276 (11%)
Query: 41 DDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPV 100
D DDDE+ N A++ E+ E + IV HPLY +L+ AH+S +I P
Sbjct: 189 DRDDDEK--------NKATDRGKLPENEEEQLLRDAIVDHPLYPELVVAHISIFKIGAPK 240
Query: 101 DQLPKID---AQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVR 157
L K+D + R + + ++ + + D LD FM Y+ LL F+E L+
Sbjct: 241 GLLIKLDEMEKKFQRFQYGESSWNVLHVTKFGQDPSLDFFMRSYIDLLTKFREDLENPYN 300
Query: 158 VHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGF 217
A DLE +P D+ED SD D S D D
Sbjct: 301 KFAQYKDKVTKDLEDLCGHYIETTP----------DEEDNFGSDIGTKDMSQDLNDLEIL 350
Query: 218 GP---LVPTESERSLM---ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 271
G + + + S++ + ELK L+ Y + I ++ E R R+ GKLP +
Sbjct: 351 GEENLMYTADIDESIVIDPDAADEELKKMLRLKYGKHIAGLKAEFNRVRKKGKLPTNARQ 410
Query: 272 LLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
+LK W+ H+ WPYP S + + +C LN
Sbjct: 411 ILKDWFSRHSYWPYP------SEMEKAYLQRLCGLN 440
>gi|356504010|ref|XP_003520792.1| PREDICTED: homeobox protein knotted-1-like 1-like [Glycine max]
Length = 307
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 33/244 (13%)
Query: 48 EAPK-NNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
EAP+ NN S+S+ + R K +I HPLY LLSA++ C ++ P P++
Sbjct: 43 EAPQQNNVTESSSDMSDRM-------IKIQIANHPLYPDLLSAYIECQKVGAP----PEL 91
Query: 107 DAQLSRSRDVLAKYSAVANGR--VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
L + + + S N R +++ ELD FM + +L+ +KE+L + EA
Sbjct: 92 ACLL----EEIGRESHRMNARREIVEGPELDHFMETFCEVLHRYKEELSRPFN----EAT 143
Query: 165 MACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDG-PDSMGFGPLVPT 223
+ D+E L +L + +S+ D+ S+ G ++ D + P+
Sbjct: 144 LFLGDMESQLSNLCNGTLTKSSDNNNRSDEVASGASEEELSCGEMEAFEDHVSSSVTCPS 203
Query: 224 ESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKW 283
+ LK L + Y +R+E L++R+ GKLP D L WW +H +W
Sbjct: 204 D----------QRLKEMLLRKYSGHFSGLRKEFLKRRKKGKLPKDARIALMDWWNTHHRW 253
Query: 284 PYPT 287
PYPT
Sbjct: 254 PYPT 257
>gi|218775075|dbj|BAH03543.1| homeobox protein [Triticum aestivum]
Length = 337
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 42/219 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-----V 128
KA+I+ HPLY LL++++ C ++ P + L ++ A V AK A +GR
Sbjct: 80 KAKIMAHPLYSPLLASYLDCQKVGAPPEVLERLSA-------VAAKLDA-GHGRGKHESP 131
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
D ELDQFM Y +L ++E+L + ++ EA +E L S+T GA
Sbjct: 132 RPDPELDQFMEAYCNMLAKYREELARPIQ----EATEFFKSVETQLDSITFTDSTNCEGA 187
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
S+D+ D S D S + ELKH+L + Y
Sbjct: 188 GSSEDELD--TSCVEEIDPSAED-----------------------KELKHQLLRKYGGY 222
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E ++R+ GKLP + L WW H+KWPYP+
Sbjct: 223 VGSLRQEFCKRRKKGKLPKEARQKLLHWWELHSKWPYPS 261
>gi|242052735|ref|XP_002455513.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
gi|241927488|gb|EES00633.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
Length = 294
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y LLSA++ C ++ P Q+ + ++SR R+ + G + D E
Sbjct: 39 KAQIASHPRYPSLLSAYIECRKVGAP-PQVASLLEEVSRDRE---RRPGAGAGEIGVDPE 94
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA ++ L +L S G S AT +
Sbjct: 95 LDEFMDSYCRVLVRYKEELSRPFD----EAASFLSSIQAQLSNL--CSAGSSPAATATHS 148
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
D+ S+ G D PD + E L + HELK L + Y + +R
Sbjct: 149 DDMMGSSEDEQCSGDTDVPD-------IGQEHSSRLAD---HELKEMLLKKYSGCLSRLR 198
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 199 SEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 232
>gi|149389448|gb|ABR26247.1| transcription factor STM4 [Euphorbia esula]
Length = 370
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 35/224 (15%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HP Y +LL+A+++C ++ P P+I A+L + A +
Sbjct: 114 TASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGPSGTSCLG 169
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
+D LDQFM Y +L ++++L + + EA++ +E ++LT SP S A
Sbjct: 170 EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALTVSSP-HSACAE 224
Query: 190 MSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
+D + E++VD + NF D + HELK +L + Y
Sbjct: 225 ANDRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYS 261
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +R+E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 262 GHLCSLRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 305
>gi|149389446|gb|ABR26246.1| transcription factor STM1 [Euphorbia esula]
Length = 376
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HP Y +LL+A+++C ++ P P+I A+L + A +
Sbjct: 120 TASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGPSGTSCLG 175
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
+D LDQFM Y +L ++++L + + EA++ +E ++LT SP S A
Sbjct: 176 EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESHFKALTVSSP-HSACAE 230
Query: 190 MSD---DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
+D E++VD + NF D + HELK +L + Y
Sbjct: 231 ANDRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYS 267
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +R+E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 268 GHLCSLRKEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 311
>gi|55416167|gb|AAV50045.1| homeobox protein [Saccharum hybrid cultivar Pindar]
Length = 315
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y LLSA++ C ++ P Q+ + ++SR R A G + D E
Sbjct: 41 KAQIASHPRYPSLLSAYIECRKVGAP-PQVASLLEEVSRERSP----GAAGAGEIGVDPE 95
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA ++ L +L S G S AT +
Sbjct: 96 LDEFMDSYCRVLVRYKEELSRPFD----EAASFLSSIQAQLSNL--CSAGSSPAATATHS 149
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
D+ S+ G D PD + E L + HELK L + Y + +R
Sbjct: 150 DDMMGSSEDEQCSGDTDVPD-------IGQEHSSRLAD---HELKEMLLKKYSGCLSRLR 199
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 200 SEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 233
>gi|110340603|gb|ABG67974.1| STM protein [Kalanchoe daigremontiana]
Length = 249
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +L++A+V+C ++ P P++ +L R+ L+ + +GR+ +D LDQF
Sbjct: 1 MSHPHYHRLVAAYVNCQKVGAP----PEVVEKLERACAGLSSIT-TGSGRLGEDPGLDQF 55
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ 197
M Y +L ++ +L + + EA+ +E ++LT S +S S D
Sbjct: 56 MEAYCEMLTKYELELSKPFK----EAMAFLSRIESQFKALTLSSSSDSPAYGQSSDGNGS 111
Query: 198 VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEIL 257
D D + + +D P +R ELK +L + Y +++E +
Sbjct: 112 SDEDVDVHNDLID-----------PQAEDR--------ELKGQLLRKYSGYPGSLKQEFM 152
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
++R+ GKLP + L WW H KWPYP+ S+
Sbjct: 153 KRRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 185
>gi|165855683|gb|ABY67935.1| shoot meristemless STM3 [Euphorbia esula]
Length = 297
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 35/221 (15%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HP Y +LL+A+++C ++ P P+I A+L + A +
Sbjct: 109 TASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGPSGTSCLG 164
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
+D LDQFM Y +L ++++L + + EA++ +E ++LT SP S A
Sbjct: 165 EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALTVSSP-HSACAE 219
Query: 190 MSD---DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
+D E++VD + NF D + HELK +L + Y
Sbjct: 220 ANDRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYS 256
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 257 GHLCSLRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 297
>gi|165855677|gb|ABY67934.1| shoot meristemless STM2 [Euphorbia esula]
Length = 264
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 35/224 (15%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HP Y +LL+A+++C ++ P P+I A+L + A +
Sbjct: 9 TASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGPSGTSCLG 64
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
+D LDQFM Y +L ++++L + + EA++ +E ++LT SP S A
Sbjct: 65 EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALTVSSP-HSACAE 119
Query: 190 MSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
+D + E++VD + NF D + HELK +L + Y
Sbjct: 120 ANDRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYS 156
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +R+E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 157 GHLCSLRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 200
>gi|188528488|emb|CAD58394.2| putative knotted-1-like protein [Helianthus tuberosus]
Length = 348
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 56/294 (19%)
Query: 12 LVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETV 71
L +P +S T + + HHH +++ +++ NS SN
Sbjct: 28 LCVPQSSVVYNNTTLIFSPQDHHHRHHSNCGTSASAMMVEDHNTNSNSN----------- 76
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR---- 127
KA+I+ HP Y +LLSA+++C +I P + + +++ S V+A S+ +
Sbjct: 77 -VKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRAS--VMAAMSSRSGSDGAGT 133
Query: 128 -----------VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS 176
V D LDQFM Y +L ++++L + + EA++ +E ++
Sbjct: 134 SGGGAGMSSSIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRMESQFKA 189
Query: 177 LTGVSPGESTGATMSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERV 233
+T + G D + E+++D D N +G +D P +R
Sbjct: 190 ITFSNSDSGCGEGGMDRNGSSEEELDVDMNN-NGMVD-----------PQAEDR------ 231
Query: 234 RHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 232 --ELKGQLLRKYSGYLGSLKQEFMKKRKEGKLPKEARQQLLDWWTRHYKWPYPS 283
>gi|85543290|gb|ABC71525.1| KNOTTED1 homeodomain protein [Sorghum bicolor]
Length = 348
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 35/233 (15%)
Query: 59 SNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQL----SRSR 114
S+ + A D E +K K I+ HP Y LL+A++ C ++ P D ++ A +R R
Sbjct: 87 SSSSPYAGDLEAIKAK--IISHPHYYSLLAAYLECKKVGAPPDVSARLTAMAQELEARQR 144
Query: 115 DVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
L+ A + ELDQFM Y +L FKE+L + ++ AME + SL
Sbjct: 145 TALSGLGAAT------EPELDQFMEAYHEMLVKFKEELTRPLQ-EAMEFMRRVESQLNSL 197
Query: 175 QSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
S++G S + S++D++ +T + + G D
Sbjct: 198 -SISGRSLRNILSSGSSEEDQEGSGGETELPEVDVHGVD--------------------- 235
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K + GKLP + +WW H KWPYP+
Sbjct: 236 QELKHHLLKKYSGYLSSLKQELSKKMKKGKLPREARQQHLSWWDLHYKWPYPS 288
>gi|413950087|gb|AFW82736.1| liguleless4 [Zea mays]
Length = 277
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V D E
Sbjct: 54 KAQIAGHPRYPSLLSAYIECRKVGAP-PEVATLLEEIGRERCA----AASAGGEVGLDPE 108
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA + L SL G + A++SD+
Sbjct: 109 LDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCGAA------ASLSDE 158
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V S D + G D+ P S R L +R ELK L + Y + +R
Sbjct: 159 ---MVGSSEE--DEACSGGDTEATEPGQQEHSSR-LADR---ELKEMLLKKYSGCLSRLR 209
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
E L+KR+ GKLP D S L WW +H +WPYPTV+
Sbjct: 210 SEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTVT 245
>gi|3426304|gb|AAC32262.1| Knox class 1 protein [Pisum sativum]
gi|3462612|gb|AAC33008.1| knotted1-like class I homeodomain protein [Pisum sativum]
Length = 371
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 34/236 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
N+NG + + KA+I+ HP Y +LL A+++C ++ P + + +++ + + V
Sbjct: 101 NNNGASSSSSSSAVKAKIMAHPHYHRLLEAYINCQKVGAPSEVVTRLEEACASA--VRMG 158
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
AV +G + +D LDQFM Y +L ++++L + ++ EA++ +E ++LT
Sbjct: 159 GDAVGSGCIGEDPALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTV 214
Query: 180 VSPGESTGATMSDD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
S ++ D +EDQVD N D P +R
Sbjct: 215 SSSSDNIACNEGGDRNGSSEEDQVDLYNNMID---------------PQAEDR------- 252
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 253 -ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQ 307
>gi|224123968|ref|XP_002330254.1| predicted protein [Populus trichocarpa]
gi|222871710|gb|EEF08841.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y L+SAH+ C ++ P + + ++A + + + Y A D E
Sbjct: 67 KTQIANHPRYPDLVSAHLECQKVGAPPEMVSLLEAIGRGNYKINSFYEIGA------DPE 120
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA +E L SL T+
Sbjct: 121 LDEFMESYCEVLRRYKEELSKPFD----EAATFLSSIESQLSSLCK--------GTL--- 165
Query: 194 DEDQVDSDTNFFD-GSLDGP-----DSMGFGPLVPTES-ERSLMERVRHELKHELKQGYK 246
T FD GS D P + + G + +ES E + + LK L + Y
Sbjct: 166 --------TKMFDYGSADEPAGTSEEELSCGEVEASESQETTGVSSQEQNLKGMLMRKYS 217
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ ++R+E L+ R+ GKLP D + L WW H +WPYPT
Sbjct: 218 AHLSNLRKEFLKNRKKGKLPKDARTTLLDWWNHHYRWPYPT 258
>gi|54042995|gb|AAV28488.1| homeodomain protein ARBORKNOX1 [Populus tremula x Populus alba]
Length = 361
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 33/226 (14%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 103 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASMAPANTG 158
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GE 184
+ +D LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G
Sbjct: 159 CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTVSSPISGC 214
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G + E++VD + NF D P ++ ELK +L +
Sbjct: 215 GDGNDRNVSSEEEVDVNNNFID---------------PQAEDQ--------ELKGQLLRR 251
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 252 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 297
>gi|33333544|gb|AAQ11888.1| knotted 1 [Nicotiana tabacum]
Length = 327
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 20/257 (7%)
Query: 46 EEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPK 105
++E P NN +S N+ +A + KA+I HPLY LLSA++ C ++ TP ++
Sbjct: 32 QQEGPINN--SSVDNNLEKASLEMSDLIKAQIANHPLYPNLLSAYLQCRKVGTP-QEMAS 88
Query: 106 IDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
I ++S+ ++ S+ N + D ELD FM Y +L +KE+L + EA
Sbjct: 89 ILEEISKENHLI---SSCHNTEIGTDPELDDFMESYCAVLLKYKEELSKPFD----EATT 141
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFG----PLV 221
++E L SL + +T T S +S+ N+ G G V
Sbjct: 142 FLNNIESQLSSLCKENLTTTTTTTTS------FNSNNNYLSDEAGGTSDEDLGCREMEAV 195
Query: 222 PTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHA 281
+ E +ELK L + Y + +R+E L+KR+ GKLP D + L WW +H
Sbjct: 196 DSTQESPANREGDNELKETLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTALLDWWNTHY 255
Query: 282 KWPYPTVSRTNSCIAIS 298
+WPYPT N I+
Sbjct: 256 RWPYPTEEEKNRLSEIT 272
>gi|218193820|gb|EEC76247.1| hypothetical protein OsI_13685 [Oryza sativa Indica Group]
Length = 559
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 45/223 (20%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG------- 126
KAEI+ HP Y LL+A++ C ++ P D L K+ A + A+ A+G
Sbjct: 290 KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPA------AQQLDEADGHPRRLHE 343
Query: 127 --RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
R D +LDQFM Y +L ++E+L++ ++ EA +E L SL S E
Sbjct: 344 PQRDDDPDQLDQFMDAYCSMLTRYREELERPIQ----EAAEFFSRVETQLDSLA-ESNCE 398
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
TG++ + D+D + D S +LKH+L +
Sbjct: 399 GTGSSEEEQDQDTSCPEAEEIDPS-------------------------DKQLKHQLLRK 433
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + D+R+E ++ + GKLP + L WW H KWPYP+
Sbjct: 434 YGGSLGDLRQEFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 476
>gi|242033395|ref|XP_002464092.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
gi|241917946|gb|EER91090.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
Length = 334
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I+ HPLY LL A + C ++ P P+ +LS D + S + D
Sbjct: 64 IKAKIMSHPLYPALLRAFIDCRKVGAP----PETVGRLSALADEVEMNSDDRQEQRPADP 119
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELDQFM Y +L ++++L + ++ EA +E + S + G G SD
Sbjct: 120 ELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFRSMEAQIDSFSLDDNGYEEGGGSSD 175
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
+DE + G L G +P +E ELK L Y + +
Sbjct: 176 EDEQET--------GDLGG---------LPVPAETGSPSGEDKELKSRLLNKYSGYLSSL 218
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E+ RK++ GKLP D L WW H +WPYP+
Sbjct: 219 WRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 253
>gi|188531742|gb|ACD62901.1| STM-like protein [Ipomoea nil]
Length = 326
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+++C +I P P++ A+L + +A + +D
Sbjct: 74 KAKIMAHPHYHRLLAAYLNCQKIGAP----PEVVARLEEACASMAAMGRTGGSCLGEDPA 129
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD- 192
LDQFM Y +L ++++L + + EA++ +E ++LT ES GA D
Sbjct: 130 LDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIESQFKALTLPCSSESAGADAMDR 185
Query: 193 --DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
E++VD T F D P +R ELK +L + Y +
Sbjct: 186 NVSSEEEVDVTTGFID---------------PQVEDR--------ELKGQLLRKYSGYLG 222
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 223 SLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 262
>gi|226529576|ref|NP_001149876.1| KNOX1 domain containing protein [Zea mays]
gi|195635197|gb|ACG37067.1| KNOX1 domain containing protein [Zea mays]
Length = 360
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 22/236 (9%)
Query: 56 NSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRD 115
+S + GRA D + VK K IV HP Y +LL+A + C ++ P + +I ++R R+
Sbjct: 60 SSVAGHGGRAADLDPVKAK--IVSHPSYHRLLAAFLDCHKVGCPPEAAEEI-XXVARERE 116
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+ ++ D ELDQFM Y LL ++KE+L + +R EA +E L
Sbjct: 117 AWQRAASGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLR----EAEEFLTTVEAQLN 172
Query: 176 SLTGVSP--GESTGATMSDDDEDQVD-SDTNFFDGS-LDGPDSMGFGPLVPTESERSLME 231
S+T P G + + D VD SD +GS ++ ++G P +
Sbjct: 173 SITNTGPTMGAFISSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDDK------- 225
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + ++R+E+ +KR+ KLP + L +WW H +WPYP+
Sbjct: 226 ----ELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPS 277
>gi|284468451|gb|ADB90285.1| KNOX [Fragaria vesca]
Length = 330
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y L+SA++ C ++ P P+I + L L+ ++ + D E
Sbjct: 65 KTQIANHPRYPDLVSAYIDCQKVGAP----PEIKSLLEEV-GRLSFPTSTCRSEIGADPE 119
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG---ATM 190
LD+FM Y +L+++KE+L + V EA ++E L L + ++ A +
Sbjct: 120 LDEFMDTYCGVLHTYKEELSKPVD----EATTFLNNIELQLSGLCKGTFQKNNCDLQAAV 175
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
DE S+ F G ++ + + S ELK L Y +
Sbjct: 176 PLPDEAVGSSEEEFSYGEMEAAEG----------QDTSAFRACDRELKDMLLHKYSGYLG 225
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++++ L+ R+ GKLP D S L WW +H +WPYPT
Sbjct: 226 KLKKDFLKSRKKGKLPKDARSALMDWWNTHYRWPYPT 262
>gi|58011285|gb|AAW62517.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 460
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A IV HP Y +L+ AH++C ++A + + +ID + +D +A + E
Sbjct: 217 RAAIVSHPHYPELVVAHMNCHKVAASPEVVSQIDEIIQNFKDFQPPVAASLGA----NPE 272
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LDQFM Y YS + ++ VR EAV C L+Q Q +T S S + SDD
Sbjct: 273 LDQFMVAY----YSMLLKCEKEVRKTFKEAVAFCKKLDQQFQVITNGS-ASSVTSVESDD 327
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+ DS + G+ E E M + + ELK +L + Y I ++
Sbjct: 328 RNEAYDSSEDEDSGA-------------EVEIEVDPMAKDK-ELKEQLMRKYSGYISSLK 373
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
E L+K++ GKLP D+ +L WW H KWPYP+ S S
Sbjct: 374 HEFLKKKKKGKLPKDSRQILLNWWSVHYKWPYPSESEKAS 413
>gi|55276120|gb|AAV49801.1| homeobox transcription factor KN2 [Populus trichocarpa x Populus
deltoides]
Length = 373
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 115 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPANTG 170
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GE 184
+ +D LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G
Sbjct: 171 CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPISGC 226
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G + E++VD + NF D + ELK +L +
Sbjct: 227 GDGNDRNVSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRR 263
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 264 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 309
>gi|160420030|dbj|BAF93478.1| class-I knotted1-like homeobox protein IBKN1 [Ipomoea batatas]
Length = 322
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+++C +I P P++ A+L + +A + +D
Sbjct: 70 KAKIMAHPHYHRLLAAYLNCQKIGAP----PEVVARLEEACASMAAMGRAGGTCLGEDPA 125
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD- 192
LDQFM Y +L ++++L + + EA++ +E ++LT ES GA D
Sbjct: 126 LDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIESQFKALTIPCSSESAGADAMDR 181
Query: 193 --DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
E++VD T F D P +R ELK +L + Y +
Sbjct: 182 NVSSEEEVDVTTGFID---------------PQVEDR--------ELKGQLLRKYSGYLG 218
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 219 SLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 258
>gi|258958638|gb|ACV88386.1| class I knox protein [Fragaria x ananassa]
Length = 330
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y L+SA++ C ++ P P+I + L L+ ++ + D E
Sbjct: 65 KTQIANHPRYPDLVSAYIDCQKVGAP----PEIKSLLEEV-GRLSFPTSTCRSEIGADPE 119
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG---ATM 190
LD+FM Y +L+++KE+L + V EA ++E L L + ++ A +
Sbjct: 120 LDEFMDTYCGVLHTYKEELSKPVD----EATTFLNNIELQLSDLCKGTFQKNNCDLQAAV 175
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
DE S+ F G ++ + + S ELK L Y +
Sbjct: 176 PLPDEAVGGSEEEFSYGEMEAAEG----------QDTSAFRACDRELKDMLLHKYSGYLG 225
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++++ L+ R+ GKLP D S L WW +H +WPYPT
Sbjct: 226 KLKKDFLKSRKKGKLPKDARSALMDWWNTHYRWPYPT 262
>gi|225444460|ref|XP_002271944.1| PREDICTED: homeobox protein SBH1-like [Vitis vinifera]
Length = 361
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 35/227 (15%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D T KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A
Sbjct: 102 DGSTSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASEAAMVRTGTS 157
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ +D LDQFM Y +L ++++L + + EA++ +E ++LT VS +S
Sbjct: 158 CIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALT-VSSSDSA 212
Query: 187 GATMSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
G D + E++VD + NF D P +R ELK +L +
Sbjct: 213 GGEGLDRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLR 249
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 250 KYSGYLSSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 296
>gi|357131920|ref|XP_003567581.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
distachyon]
Length = 290
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y LLSA++ C ++ P P++ + L + + + G + D E
Sbjct: 39 KAQIASHPRYPTLLSAYIECRKVGAP----PEVASLL----EEIGRERRAGAGAIGVDPE 90
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA ++ L +L S G S AT +
Sbjct: 91 LDEFMESYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNL--CSGGSSPAATATHS 144
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
DE SD G DG D + E + + HELK L + Y + +R
Sbjct: 145 DEMVGSSDDEQCSGETDGLD-------IGQEHSSRIAD---HELKEMLLKKYSGCLSRLR 194
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D + L WW +H +WPYPT
Sbjct: 195 SEFLKKRKKGKLPKDARTALMDWWNTHYRWPYPT 228
>gi|162463933|ref|NP_001105084.1| liguleless4 [Zea mays]
gi|30348863|gb|AAP31409.1|AF457118_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
gi|195607142|gb|ACG25401.1| homeotic protein knotted-1 [Zea mays]
gi|238009140|gb|ACR35605.1| unknown [Zea mays]
gi|408690288|gb|AFU81604.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|413950086|gb|AFW82735.1| liguleless4 [Zea mays]
Length = 307
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 105/214 (49%), Gaps = 24/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V D E
Sbjct: 54 KAQIAGHPRYPSLLSAYIECRKVGAP-PEVATLLEEIGRERCA----AASAGGEVGLDPE 108
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA + L SL G + A++SD+
Sbjct: 109 LDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCGAA------ASLSDE 158
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V S D + G D+ P S R L +R ELK L + Y + +R
Sbjct: 159 ---MVGSSEE--DEACSGGDTEATEPGQQEHSSR-LADR---ELKEMLLKKYSGCLSRLR 209
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 210 SEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 243
>gi|224115894|ref|XP_002317151.1| predicted protein [Populus trichocarpa]
gi|222860216|gb|EEE97763.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 52 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPANTG 107
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GE 184
+ +D LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G
Sbjct: 108 CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPISGC 163
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G + E++VD + NF D + ELK +L +
Sbjct: 164 GDGNDRNVSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRR 200
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 201 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 246
>gi|164454385|dbj|BAF96739.1| knotted1-like homeobox transcription factor MKN2 [Physcomitrella
patens]
Length = 410
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 116/279 (41%), Gaps = 47/279 (16%)
Query: 44 DDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQL 103
+DE++AP + + DN ++E + ++ +A I+ HP Y +++ AHV +I P
Sbjct: 122 EDEDDAP--DAQDPEFEDNPQSE--QDLELRAAIIDHPFYPEMVLAHVRVFKIGAP---- 173
Query: 104 PKIDAQLSRSRDVLAK-----YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRV 158
+L R D LAK ++ D ELD FM YV +L F E L++
Sbjct: 174 ----RRLRRKLDELAKKFQRFQDCDHTSKIGSDPELDHFMRSYVGVLTKFAEDLEEPFNK 229
Query: 159 HAMEAVMACWDLEQSLQSLTGVSPGEST----------GATMSDDDEDQVDSDTNFFDGS 208
LE+ +P E GA DD + D + +
Sbjct: 230 FIQFTDNTSKALEEICGHYVDTTPDEDNCGFDIGPLEYGAQEGDDLDTLGDENVMY---P 286
Query: 209 LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGD 268
LD +S+ P+ E ++K L++ Y I +++ E R R+ GKLP
Sbjct: 287 LDIDESVIVDPMASDE-----------DIKKALRKKYGRHIGELKAEFNRVRKKGKLPTS 335
Query: 269 TTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
++LK W+ H+ WPYP S + IC LN
Sbjct: 336 ARTILKDWFNRHSHWPYP------SEMEKQYLQRICGLN 368
>gi|18389212|gb|AAL67665.1| invaginata [Antirrhinum majus]
Length = 351
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+++C +I P P++ +L + A + R+ +D
Sbjct: 99 KAKIMAHPYYHKLLAAYINCQKIGAP----PEVAVKLEEACASAATMGRNSVSRIGEDPA 154
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS-- 191
LDQFM Y +L ++++L + R EA++ +E ++LT S + G M
Sbjct: 155 LDQFMEAYCEMLSKYEQELSKPFR----EAMLFLSRIECQFKALTLSSSDSACGEAMDRH 210
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
E+++D D + D P +R ELK +L + Y +
Sbjct: 211 GSSEEEIDVDNSLID---------------PQAEDR--------ELKGQLLRKYSGYLGS 247
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 248 LKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 286
>gi|168011803|ref|XP_001758592.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
gi|162690202|gb|EDQ76570.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
Length = 445
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 116/279 (41%), Gaps = 47/279 (16%)
Query: 44 DDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQL 103
+DE++AP + + DN ++E + ++ +A I+ HP Y +++ AHV +I P
Sbjct: 157 EDEDDAP--DAQDPEFEDNPQSE--QDLELRAAIIDHPFYPEMVLAHVRVFKIGAP---- 208
Query: 104 PKIDAQLSRSRDVLAK-----YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRV 158
+L R D LAK ++ D ELD FM YV +L F E L++
Sbjct: 209 ----RRLRRKLDELAKKFQRFQDCDHTSKIGSDPELDHFMRSYVGVLTKFAEDLEEPFNK 264
Query: 159 HAMEAVMACWDLEQSLQSLTGVSPGEST----------GATMSDDDEDQVDSDTNFFDGS 208
LE+ +P E GA DD + D + +
Sbjct: 265 FIQFTDNTSKALEEICGHYVDTTPDEDNCGFDIGPLEYGAQEGDDLDTLGDENVMY---P 321
Query: 209 LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGD 268
LD +S+ P+ E ++K L++ Y I +++ E R R+ GKLP
Sbjct: 322 LDIDESVIVDPMASDE-----------DIKKALRKKYGRHIGELKAEFNRVRKKGKLPTS 370
Query: 269 TTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
++LK W+ H+ WPYP S + IC LN
Sbjct: 371 ARTILKDWFNRHSHWPYP------SEMEKQYLQRICGLN 403
>gi|255554765|ref|XP_002518420.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223542265|gb|EEF43807.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 353
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 33/226 (14%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D KA+I+ HP Y +LL+A+++C ++ P P++ +L + A
Sbjct: 95 DAAAASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEVVTRLEEACASAATMGQAGTS 150
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ +D LDQFM Y +L ++++L + + EA++ +E ++LT SP +
Sbjct: 151 CIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLQRVECQFKALTVASPNSAL 206
Query: 187 G--ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G + + E++VD + NF D + ELK +L +
Sbjct: 207 GEASDRNGSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRR 243
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 244 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 289
>gi|168051647|ref|XP_001778265.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
gi|162670362|gb|EDQ56932.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
Length = 428
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A I+ HP Y +++ AHV +I P + K+D L+R +Y ++ D
Sbjct: 166 RAAIIDHPFYPEMVLAHVRVFKIGAPRRLINKLD-DLTRK---FQQYQNCDTLKIGTDPA 221
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE--------- 184
LD FM YV +L F E L++ LE +P E
Sbjct: 222 LDHFMRSYVDMLTKFAEDLEEPFNKFMQFKDSTTKALEGICGHYVETTPDEDDNNGFDIG 281
Query: 185 --STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
GA SDD D + + LD +S+ P+ E E+K L+
Sbjct: 282 PMEYGAQASDDLYLPADENLMY---PLDIDESVVVDPMASDE-----------EIKKALR 327
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y I +++ E R R+ GKLP S+LK W+ H+ WPYP+
Sbjct: 328 KKYGRHIGELKAEFNRVRKKGKLPSSARSILKDWFNRHSYWPYPS 372
>gi|4589449|dbj|BAA76750.1| KN1-type homeobox protein [Nicotiana tabacum]
Length = 327
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 26/260 (10%)
Query: 46 EEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPK 105
++E P NN +S N+ +A + KA+I HPLY LLSA++ C ++ P ++
Sbjct: 32 QQEGPINN--SSVDNNLEKASLEMSDLIKAQIANHPLYPNLLSAYLQCRKVGAP-QEMAS 88
Query: 106 IDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
I ++S+ ++ S+ N + D ELD FM Y +L +KE+L + EA
Sbjct: 89 ILEEISKENHLI---SSGHNTEIGTDPELDDFMESYCAVLLKYKEELSKPFD----EATT 141
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDD-------DEDQVDSDTNFFDGSLDGPDSMGFG 218
++E L SL + +T T S + DE SD + G ++ DS
Sbjct: 142 FLNNIESQLSSLCKENLTTTTTTTTSFNSNNNYLSDEAGGTSDEDLCCGEMEAADSTQES 201
Query: 219 PLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWL 278
P +ELK L + Y + +R+E L+KR+ GKLP D + L WW
Sbjct: 202 PA---------NREGDNELKETLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTALLEWWN 252
Query: 279 SHAKWPYPTVSRTNSCIAIS 298
+H +WPYPT N I+
Sbjct: 253 THYRWPYPTEEEKNRLSEIT 272
>gi|224122928|ref|XP_002318951.1| predicted protein [Populus trichocarpa]
gi|222857327|gb|EEE94874.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y L+SA+V C ++ P + + ++ S + Y A D E
Sbjct: 13 KTQIANHPRYPDLVSAYVECRKVGAPPEMVSLLEDIGRCSYQINTCYEIGA------DPE 66
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L+ +KE+L + EA +E L SL T+
Sbjct: 67 LDEFMESYCEVLHRYKEELSKPFD----EATTFLSSIESQLSSLCK--------GTL--- 111
Query: 194 DEDQVDSDTNFFD-GSLDGP-----DSMGFGPLVPTESERSL-MERVRHELKHELKQGYK 246
T FD GS D P + + G + +E SL LK L Y
Sbjct: 112 --------TKIFDYGSADEPAWTSEEELSCGEVEASEIPGSLGFHSSDQNLKGVLLSKYS 163
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E L++R+ GKLP D +LL WW H +WPYPT
Sbjct: 164 GHLSSLRKEFLKQRKKGKLPKDAKTLLLDWWNHHYRWPYPT 204
>gi|164454389|dbj|BAF96741.1| knotted-like homeobox transcription factor MKN5 [Physcomitrella
patens]
Length = 404
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A I+ HP Y +++ AHV +I P + K+D L+R +Y ++ D
Sbjct: 142 RAAIIDHPFYPEMVLAHVRVFKIGAPRRLINKLD-DLTRK---FQQYQNCDTLKIGTDPA 197
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE--------- 184
LD FM YV +L F E L++ LE +P E
Sbjct: 198 LDHFMRSYVDMLTKFAEDLEEPFNKFMQFKDSTTKALEGICGHYVETTPDEDDNNGFDIG 257
Query: 185 --STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
GA SDD D + + LD +S+ P+ E E+K L+
Sbjct: 258 PMEYGAQASDDLYLPADENLMY---PLDIDESVVVDPMASDE-----------EIKKALR 303
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y I +++ E R R+ GKLP S+LK W+ H+ WPYP+
Sbjct: 304 KKYGRHIGELKAEFNRVRKKGKLPSSARSILKDWFNRHSYWPYPS 348
>gi|118482378|gb|ABK93112.1| unknown [Populus trichocarpa]
Length = 285
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 27 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPANTG 82
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GE 184
+ +D LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G
Sbjct: 83 CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPISGC 138
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G + E++VD + NF D + ELK +L +
Sbjct: 139 GDGNDRNVSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRR 175
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 176 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 221
>gi|5103725|dbj|BAA79224.1| knotted1-type homeobox protein OSH6 [Oryza sativa]
Length = 301
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLKEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA ++ L +L +G + +T AT S
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATHS 155
Query: 192 DD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
D+ DEDQ +T+ D + E L + HELK L + Y
Sbjct: 156 DEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKYS 198
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 199 GCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239
>gi|115436138|ref|NP_001042827.1| Os01g0302500 [Oryza sativa Japonica Group]
gi|75171952|sp|Q9FP29.1|KNOS1_ORYSJ RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=Homeobox protein HOS16; AltName: Full=Homeobox
protein OSH6
gi|11967917|dbj|BAB19772.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
Group]
gi|21104563|dbj|BAB93157.1| knotted1-type homeobox protein OSH6 [Oryza sativa Japonica Group]
gi|113532358|dbj|BAF04741.1| Os01g0302500 [Oryza sativa Japonica Group]
Length = 301
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLKEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA ++ L +L +G + +T AT S
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATHS 155
Query: 192 DD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
D+ DEDQ +T+ D + E L + HELK L + Y
Sbjct: 156 DEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKYS 198
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 199 GCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239
>gi|300174946|dbj|BAJ10708.1| shoot meristemless ortholog [Cladopus doianus]
Length = 352
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 57/299 (19%)
Query: 12 LVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAP-----KNNKNNSASNDNGRAE 66
+++P T PP+ HHHQN D +P N+ +N G
Sbjct: 27 MIIPQTPNALFPPS----NTTFHHHQNKSKTHHDTLSSPCMAFGSQMNVNATANSTGAGC 82
Query: 67 DW----------ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV 116
+ T KA+I+ HP Y +LL A+V+C +I P P++ A+L +R
Sbjct: 83 FFVENNVHEGINTTCSIKAKIMSHPHYNRLLLAYVNCQKIGAP----PEVVARLEEARVA 138
Query: 117 LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS 176
A ++ + D LDQFM Y +L ++++L + ++ EA++ +E ++
Sbjct: 139 AAAALGPSDSCLGQDPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVEYQFKA 194
Query: 177 LTGVSP-----GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
LT SP GE+ S D+E D + F D P ++
Sbjct: 195 LTVSSPNSGYSGEANERNASSDEEG--DGNNVFID---------------PQAEDQ---- 233
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 234 ----ELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 288
>gi|85543302|gb|ABC71531.1| KNOTTED1-like homeodomain protein [Leersia virginica]
Length = 360
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSAVANGRVLDD 131
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + +A+ +
Sbjct: 111 KAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLAAVAQDLELRQRTALGGLGAATE 166
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELDQFM Y +L ++E+L + ++ AME + + + + S++G S + S
Sbjct: 167 PELDQFMEAYQEMLVKYREELTRPLQ-EAMEFLRRV-ETQLNTLSISGRSLRNILSSGSS 224
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
++D++ +T + G D ELKH L Y +
Sbjct: 225 EEDQEGSGGETELPEIDAHGVD---------------------QELKHHLLNKYSGYLSS 263
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E+ +K++ G+LP D L +WW H KWPYP+ S+
Sbjct: 264 LKQELSKKKKKGELPKDARQQLLSWWELHCKWPYPSESQ 302
>gi|211926930|dbj|BAG82674.1| KN1-type homeobox transcription factor [Triticum aestivum]
Length = 306
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ A L + A A G + D
Sbjct: 48 KAQIAGHPRYPSLLSAYIECRKVGAP----PEVAALLEEIGQPERRGGGATAAGEIGLDP 103
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y LL +KE+L + + EA + L +L G T AT
Sbjct: 104 ELDEFMEAYCRLLSRYKEELSRPLD----EAASFLTTIRSQLTNLCG----GGTTATSPH 155
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
DE S+ G DG D+ + S R HELK L + Y + +
Sbjct: 156 SDEMVGSSEDEPCSGDADGSDAG-----MQEHSSR----LADHELKEMLLKKYSGCLSRL 206
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 207 RSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPT 241
>gi|28195122|gb|AAO33774.1| knotted protein TKN4 [Solanum lycopersicum]
Length = 335
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 33/275 (12%)
Query: 24 PTWLNN------AVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEI 77
PT +NN AV HH+ Q D N K+ + +D KA+I
Sbjct: 31 PTIINNTTTSFAAVHHHYCQLEAAVAADHNHHQNNTKSTTNMSD----------LIKAQI 80
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
HPLY LLSA++ C ++ P + +D ++S+ ++++ S+ + + D ELD+F
Sbjct: 81 ANHPLYPNLLSAYLQCRKVGAPQEMTSILD-EISKENNLIS--SSRHSSEIGADPELDEF 137
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ 197
M Y +L +KE+ + EA ++E L SL + ST DE
Sbjct: 138 MESYCAVLVKYKEEFSKPFD----EATSFLSNIESQLSSLCKDNLITSTSFNNYISDEAG 193
Query: 198 VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEIL 257
SD + ++ DS P E +ELK L + Y + +R+E L
Sbjct: 194 GSSDEDLGCEEMEAADSQE----SPANCEGD------NELKEMLMRKYSGYLSSLRKEFL 243
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
+KR+ GKLP + +L WW +H +WPYPT N
Sbjct: 244 KKRKKGKLPKEARIVLLDWWKNHYRWPYPTEEEKN 278
>gi|194703086|gb|ACF85627.1| unknown [Zea mays]
gi|414871974|tpg|DAA50531.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 352
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 30/243 (12%)
Query: 48 EAPKNNKNNSASNDNGRAE--DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPK 105
EAP + +A +D R D + KA+I+ HPLY LL A + C ++ P++
Sbjct: 58 EAPTLPPSAAAVSDPSRQSNSDRGSEIIKAKIMSHPLYPALLRAFIDCRKVGAPLE---- 113
Query: 106 IDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
I +LS D + S D ELDQFM Y +L ++++L + ++ EA
Sbjct: 114 IVGRLSALADDVETNSDGRQEEQPADPELDQFMEIYCHMLVRYRQELTRPIQ----EADE 169
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ-VDSDTNFFDGSLDGPDSMGFGPLVPTE 224
+E + S + G G SD+DE + VD +G P+ T
Sbjct: 170 FFKSMEAQIDSFSLDDNGYEEGGGSSDEDEQETVD---------------LGGLPVPETG 214
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
S + ELK+ L Y + + E+ RK++ GKLP D L WW H +WP
Sbjct: 215 SPSGEGK----ELKNHLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWP 270
Query: 285 YPT 287
YP+
Sbjct: 271 YPS 273
>gi|31323451|gb|AAP47027.1|AF375968_1 knotted homeodomain protein 4, partial [Solanum lycopersicum]
Length = 338
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 33/275 (12%)
Query: 24 PTWLNN------AVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEI 77
PT +NN AV HH+ Q D N K+ + +D KA+I
Sbjct: 34 PTIINNTTTSFAAVHHHYCQLEAAVAADHNHHQNNTKSTTNMSD----------LIKAQI 83
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
HPLY LLSA++ C ++ P + +D ++S+ ++++ S+ + + D ELD+F
Sbjct: 84 ANHPLYPNLLSAYLQCRKVGAPQEMTSILD-EISKENNLIS--SSRHSSEIGADPELDEF 140
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQ 197
M Y +L +KE+ + EA ++E L SL + ST DE
Sbjct: 141 MESYCAVLVKYKEEFSKPFD----EATSFLSNIESQLSSLCKDNLITSTSFNNYISDEAG 196
Query: 198 VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEIL 257
SD + ++ DS P E +ELK L + Y + +R+E L
Sbjct: 197 GSSDEDLGCEEMEAADSQE----SPANCEGD------NELKEMLMRKYSGYLSSLRKEFL 246
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
+KR+ GKLP + +L WW +H +WPYPT N
Sbjct: 247 KKRKKGKLPKEARIVLLDWWKNHYRWPYPTEEEKN 281
>gi|225450589|ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1 [Vitis vinifera]
gi|147820996|emb|CAN77695.1| hypothetical protein VITISV_015614 [Vitis vinifera]
gi|296089776|emb|CBI39595.3| unnamed protein product [Vitis vinifera]
Length = 310
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++IV HP Y L+SA++ C ++ P ++ + ++ R + S G + D E
Sbjct: 52 KSQIVNHPRYPNLVSAYIECRKVGAP-PEMASLLEEIGRESQPMNSRS----GEIGADPE 106
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGESTGATMSD 192
LD+FM Y +L+ +KE+L + EA D+E L +L G ++G+ SD
Sbjct: 107 LDEFMESYCEVLHRYKEELSKPFD----EATSFLSDIESQLSNLCKGALTAGTSGSYYSD 162
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR-HELKHELKQGYKEKIVD 251
+ + + + G +ES+ SL R ELK L + Y +
Sbjct: 163 EAAGTSEEE-------------LSCGEAEVSESQESLGARPGDQELKEMLMRKYSGYLSS 209
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R+E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 210 LRKEFLKKRKKGKLPKDARTMLLEWWNTHYRWPYPT 245
>gi|357134921|ref|XP_003569063.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
distachyon]
Length = 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y LLSA++ C ++ P D ++ ++SR R Y A G + D E
Sbjct: 43 KAQIAAHPRYPSLLSAYIECRKVGAPPDVAVLLE-EMSRERR--PGYEAAGAGEIGLDPE 99
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L+ +KE+L + + EA + L +L G G + SD+
Sbjct: 100 LDEFMEAYCRVLWRYKEELSRPLD----EAASFLATVRTQLSNLCG---GGARATFHSDE 152
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
F S D P S G G + HELK L + Y + +R
Sbjct: 153 ----------FVGSSEDEPCS-GDGDASEAGMQEHTSRLADHELKEMLLKKYSGCLSRLR 201
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 202 SEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPT 235
>gi|60100884|gb|AAK61308.2|AF285147_1 class 1 KNOTTED1-like protein MKN2 [Physcomitrella patens]
Length = 384
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 47/279 (16%)
Query: 44 DDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQL 103
+DE++AP + + DN ++E + ++ +A I+ HP Y +++ AHV +I P
Sbjct: 66 EDEDDAP--DAQDHEFEDNPQSE--QDLELRAAIIDHPFYPEMVLAHVRVFKIGAP---- 117
Query: 104 PKIDAQLSRSRDVLAK-----YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRV 158
+L R D LAK ++ D ELD F YV +L F E L++
Sbjct: 118 ----GRLRRKLDELAKKFQRFQXXDHTSKIGSDPELDHFXRSYVGVLTKFAEDLEEPFNK 173
Query: 159 HAMEAVMACWDLEQSLQSLTGVSPGEST----------GATMSDDDEDQVDSDTNFFDGS 208
LE+ +P E GA DD + D + +
Sbjct: 174 FIQFTDNTSKALEEICGHYVDTTPDEDNCGFDIGPLEYGAQEGDDLDTLGDENVMY---P 230
Query: 209 LDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGD 268
LD +S+ P+ E ++K L++ Y I +++ E R R+ GKLP
Sbjct: 231 LDIDESVIVDPMASDE-----------DIKKALRKKYGRHIGELKAEFNRVRKKGKLPTS 279
Query: 269 TTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
++LK W+ H+ WPYP S + IC LN
Sbjct: 280 ARTILKDWFNRHSHWPYP------SEMEKQYLQRICGLN 312
>gi|18389214|gb|AAL67666.1| hirzina [Antirrhinum majus]
Length = 353
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 45/268 (16%)
Query: 33 HHHHQNNDDDDDD--------EEEAPKNNKNNSASNDNGRAE--DWETVKCKAEIVGHPL 82
HHHHQ + EE +NN N S + + + KA+I+ HP
Sbjct: 57 HHHHQEMNRQRSTVVGGSSMVYEEGHQNNSNAITSTGYYFMDSTNCDESSLKAKIMAHPH 116
Query: 83 YEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
Y +LL+A+V+C +I P P++ ++L + +A++ ++ G +D LDQ M Y
Sbjct: 117 YHRLLAAYVNCHKIGAP----PEVVSRLEEAAAAMARHGTISVG---EDPGLDQLMEAYS 169
Query: 143 LLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDT 202
+L ++++L + + EA++ +E ++LT VS + E+++D +
Sbjct: 170 EMLSKYEQELSKPFK----EAMLFLSRIESQFKALT-VSAARGEAMFRNGSSEEEIDVNN 224
Query: 203 NFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRA 262
+F D + ELK +L + Y + +++E ++KR+
Sbjct: 225 SFIDPQAEDI-----------------------ELKGQLLRKYSGYLGSLKQEFMKKRKK 261
Query: 263 GKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
GKLP + L WW H KWPYP+ S+
Sbjct: 262 GKLPKEARQQLLEWWSRHYKWPYPSESQ 289
>gi|27413549|gb|AAO11694.1| Knotted-1-like homeobox protein H1 [Nicotiana tabacum]
Length = 343
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 42/245 (17%)
Query: 52 NNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS 111
NN NN + N + K++I+ HP Y +LLSA+V+C +I P P++ A+L
Sbjct: 71 NNNNNPHEDANC-----SSTSIKSKIMAHPHYPRLLSAYVNCQKIGAP----PEVVARLE 121
Query: 112 RSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
A + G + +D LDQFM Y +L ++++L + + EA++ +E
Sbjct: 122 EVCATSATIGRNSGGIIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIE 177
Query: 172 QSLQSLTGVSPGESTGATMSDDDE------DQVDSDTNFFDGSLDGPDSMGFGPLVPTES 225
++LT S ES A D ++VD + F D
Sbjct: 178 CQFKALTLTSSSESVAALGEAIDRNGNGSSEEVDVNNGFID------------------- 218
Query: 226 ERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPY 285
++ ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPY
Sbjct: 219 ----LQAEDQELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPY 274
Query: 286 PTVSR 290
P+ S+
Sbjct: 275 PSESQ 279
>gi|11037020|gb|AAG27464.1|AF308454_1 knotted class I homeodomain KNOX [Medicago truncatula]
Length = 381
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 34/236 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
N++G + + K++I+ HP Y +LL A+++C ++ P + + +++ + + V
Sbjct: 111 NNHGSSSSSSSSSVKSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATA--VRMG 168
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
AV +G + +D LDQFM Y +L ++++L + ++ EA++ +E ++LT
Sbjct: 169 GDAVGSGCLGEDPALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTV 224
Query: 180 VSPGESTGATMSDD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
S ++ + D +ED VD N D P +R
Sbjct: 225 SSSSDNIACSEGGDRNGSSEEDHVDLYNNMID---------------PQAEDR------- 262
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 263 -ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQ 317
>gi|290796115|gb|ADD64787.1| SHOOT MERISTEMLESS [Brassica napus]
Length = 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 40/227 (17%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV--ANGR 127
+ KA+I+GHP Y +LL +V+C ++ P P++ A+L + A +A G
Sbjct: 118 SASVKAKIMGHPHYHRLLLTYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 173
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G
Sbjct: 174 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSFSG 229
Query: 188 ---ATMSDDD----EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
A + ++ E++VD + F D P +R ELK +
Sbjct: 230 YGEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQ 266
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E ++KR+ G+LP + L WW H KWPYP+
Sbjct: 267 LLRKYSGYLGSLKQEFMKKRKKGELPKEARQQLLDWWSRHYKWPYPS 313
>gi|85543298|gb|ABC71529.1| KNOTTED1 homeodomain protein [Chasmanthium latifolium]
Length = 334
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ L A G +
Sbjct: 84 IKAKIISHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTAFGGLGNAT 139
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT--GVSPGESTGA 188
+ ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ G S +
Sbjct: 140 EPELDQFMEAYHEMLVKFREELTRPLQ----EALEFMRRVESQLNSLSISGRSLRNILSS 195
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
S++D++ +T + G D ELKH L + Y
Sbjct: 196 GSSEEDQEGSGGETELPEVDAHGVD---------------------QELKHHLLKKYSGY 234
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +++E+ +K++ G LP + L +WW H KWPYP+
Sbjct: 235 LSSLKQELSKKKKKGTLPKEARQQLLSWWDLHYKWPYPS 273
>gi|329757147|gb|AEC04753.1| knotted-like homeobox KNOX4 [Fragaria vesca]
Length = 348
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 22/238 (9%)
Query: 63 GRAEDWETVKC---KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
G E V C A+I HPLY LL A++ C ++ P +L I ++ R D L++
Sbjct: 73 GNQRGGEEVSCTDFNAKIASHPLYPNLLQAYIDCQKVGAP-PELAHILEKIRRESDQLSR 131
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
V + + D ELD+FM Y +L +K L + EA+ +E L +L G
Sbjct: 132 -RTVGSTCMGVDPELDEFMETYCGILLKYKSDLTKPFN----EAITFLNSMETQLNNLAG 186
Query: 180 VSPGESTGATMSDDDE---DQVDSDTNFFDGSLDGP-------DSMGFGPLVPTESERSL 229
+ + G M D + + FD D P + M G + +S+
Sbjct: 187 AN--TTKGVLMQTRDSRISGMMKLNYWCFDHEDDAPPGNSSDYEDMSGGEIDVQDSDHQ- 243
Query: 230 MERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
V HELK +L + Y I +++E +K++ GKLP D +L WW H KWPYPT
Sbjct: 244 QRNVNHELKDKLLRKYSGYISTLKQEFSQKKKKGKLPKDAKQILADWWNLHYKWPYPT 301
>gi|371767724|gb|AEX56217.1| knotted-like 2 protein [Dactylorhiza fuchsii]
Length = 327
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLD-- 130
KA+I HP Y LLSA++ C ++ P P++ L + + +A Y G +
Sbjct: 54 KAKIARHPRYPSLLSAYIDCRKVGAP----PEVALLLEEIATERIADYGVNECGSAAEIP 109
Query: 131 -DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT----------- 178
D ELD+ M Y +L +K++L + EA +E +SL
Sbjct: 110 ADPELDKLMDSYCRVLAWYKDELSKPFE----EAASFLSSIETQFRSLCKPSAVSAISSS 165
Query: 179 --GVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE 236
SPG T S + D D ++ D P+E S +E
Sbjct: 166 SAASSPGAVTSPLPSHEALGSSDEDPSYGDDD-------------PSEIYDSSSRVPENE 212
Query: 237 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 213 LKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 263
>gi|413933450|gb|AFW68001.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 328
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I+ HPLY +L A + C ++ P P+I +LS + DV R D
Sbjct: 60 KAKIMSHPLYPAVLRAFIDCRKVGAP----PEIVGRLSALADDVEMNSDDKQEQRRAADP 115
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELDQFM Y +L ++++L + ++ EA +E + + + + G SD
Sbjct: 116 ELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFRSMEAQIDAFSLLDDNGYEGCGSSD 171
Query: 193 DDEDQ---VDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
+DE + + + GS G D +ELK+ L Y +
Sbjct: 172 EDEQEAVDLGGLSVLETGSPSGED---------------------NELKNRLLNKYSGYL 210
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E+ RK++ GKLP D L WW H +WPYP+
Sbjct: 211 SNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 248
>gi|270610244|gb|ACZ92179.1| shootmeristemless [Cichorium intybus x Cichorium endivia]
Length = 361
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 52/289 (17%)
Query: 21 PPPPTWLNNAV-----RHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRA---EDWETVK 72
PPPP NN V HHHH N ++N NNS ++ G +
Sbjct: 38 PPPPVIYNNXVIFSTQDHHHHSNCGTSA--SATMLEDNNNNSINDGGGLGFISSSSCSSS 95
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--------AQLSRSRDVLAKYSAVA 124
KA+I+ HP Y +LLSA+++C ++ P + + +++ A +S ++
Sbjct: 96 VKAKIMSHPHYPRLLSAYLNCQKVGAPPEVVERLEEACRASVMAAMSGRSGSGGSGGGMS 155
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT------ 178
V D LDQFM Y +L ++++L + + EA++ +E ++++
Sbjct: 156 TSIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISFSASDS 211
Query: 179 GVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 238
G G S++D D VD + N D P ER ELK
Sbjct: 212 GCGDGGMDRNGSSEEDLD-VDVNNNMVD---------------PQAEER--------ELK 247
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 248 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 296
>gi|195627526|gb|ACG35593.1| homeotic protein knotted-1 [Zea mays]
Length = 298
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD-DK 132
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V+ D
Sbjct: 47 KAQIAGHPRYPSLLSAYIDCRKVGAP-SEVATLLEEIGRERCA----AASAGGEVVGMDP 101
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y LL +KE+L + EA + L SL G + S S
Sbjct: 102 ELDEFMETYCRLLERYKEELSRPFD----EAASFLSSVRTQLSSLCGGAASLSDEMVESS 157
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
+DE DT D + D P + S + ELK L + Y + +
Sbjct: 158 EDE-PCSGDT---DATTD-----------PGQEHSSRL--ADRELKEMLLKKYSGCLSRL 200
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 201 RSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 235
>gi|242089383|ref|XP_002440524.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
gi|241945809|gb|EES18954.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
Length = 303
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V D E
Sbjct: 53 KAQIAGHPRYPSLLSAYIECRKVGAP-PEVATLLEEIGRERCA----AASAGGEVGLDPE 107
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+L + EA + L SL G + S S +
Sbjct: 108 LDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCGGAASLSDEMVGSSE 163
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
DE DT D + E L +R ELK L + Y + +R
Sbjct: 164 DE-PCSGDTEATD--------------LGQEHSSRLADR---ELKEMLLKKYSGCLSRLR 205
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 206 SEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 239
>gi|132424651|gb|ABO33478.1| class I KNOX homeobox transcription factor [Medicago truncatula]
Length = 374
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 34/222 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I+ HP Y +LL A+++C ++ P + + +++ + + V AV +G + +D
Sbjct: 118 KSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATA--VRMGGDAVGSGCLGEDPA 175
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LDQFM Y +L ++++L + ++ EA++ +E ++LT S ++ + D
Sbjct: 176 LDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTVSSSSDNIACSEGGD 231
Query: 194 -----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ED VD N D P +R ELK +L + Y
Sbjct: 232 RNGSSEEDHVDLYNNMID---------------PQAEDR--------ELKGQLLRKYSGY 268
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 269 LGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQ 310
>gi|85816364|gb|ABC84491.1| knotted-like transcription factor [Prunus persica]
gi|88853988|gb|ABD52723.1| KNOPE1 [Prunus persica]
Length = 389
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 33/238 (13%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y LL A++ C R+ P + + ++ A +R +
Sbjct: 112 NDDHTLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSEVVARLTA--ARQEFEARQ 169
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+VA+ D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 170 RSSVASREASKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 225
Query: 180 --------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SP E + +E+Q +S G + P+ + P +R
Sbjct: 226 NNAPPLRIFSPSEDKCEGLGSSEEEQENSG-----GETEVPE------IDPRAEDR---- 270
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 271 ----ELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 324
>gi|162464096|ref|NP_001105085.1| knotted related homeobox5 [Zea mays]
gi|30348865|gb|AAP31410.1|AF457119_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
gi|194708132|gb|ACF88150.1| unknown [Zea mays]
gi|413942049|gb|AFW74698.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 298
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD-DK 132
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V+ D
Sbjct: 47 KAQIAGHPRYPSLLSAYIDCRKVGAP-SEVATLLEEIGRERCA----AASAGGEVVGMDP 101
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y LL +KE+L + EA + L SL G + S S
Sbjct: 102 ELDEFMETYCRLLERYKEELSRPFD----EAASFLSSVRTQLSSLCGGAASLSDEMVESS 157
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
+DE DT D + D P + S + ELK L + Y + +
Sbjct: 158 EDE-PCSGDT---DATTD-----------PGQEHSSRL--ADRELKEMLLKKYSGCLSRL 200
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 201 RSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 235
>gi|50872441|gb|AAT85041.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
gi|108711298|gb|ABF99093.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215741530|dbj|BAG98025.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 336
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 78/232 (33%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P DVL K +AV + LD+
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPP--------------DVLTKLTAVPAAQQLDEA 128
Query: 133 -----------------ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+LDQFM Y +L ++E+L++ + +EA +E L
Sbjct: 129 DGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLD 184
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH 235
SL G TG++ +E+Q SD
Sbjct: 185 SLAG------TGSS----EEEQDPSDK--------------------------------- 201
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LKH+L + Y + D+R+ ++ + GKLP + L WW H KWPYP+
Sbjct: 202 QLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 253
>gi|357115393|ref|XP_003559473.1| PREDICTED: homeobox protein KNOX3-like [Brachypodium distachyon]
Length = 429
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 35/230 (15%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSA 122
A D E +K K I+ HP+Y LL+A++ CL++ P P++ ++S +RD+ L + +
Sbjct: 167 AADVEAIKAK--IISHPIYPSLLAAYLDCLKVGAP----PEVSERMSAVARDLELRQRAG 220
Query: 123 VANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT--GV 180
+ + ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ G
Sbjct: 221 LGGLAAATEPELDQFMEAYSEMLVKYREELTRPLQ----EAMEFLRRVESQLNSLSINGR 276
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
S + S++D++ +T + G D ELKH
Sbjct: 277 SLRNILSSGSSEEDQEGSGGETELPEIDAHGVD---------------------QELKHH 315
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S+
Sbjct: 316 LLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPYPSESQ 365
>gi|222625875|gb|EEE60007.1| hypothetical protein OsJ_12748 [Oryza sativa Japonica Group]
Length = 341
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 73/232 (31%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P DVL K +AV + LD+
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPP--------------DVLTKLTAVPAAQQLDEA 128
Query: 133 -----------------ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+LDQFM Y +L ++E+L++ + +EA +E L
Sbjct: 129 DGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLD 184
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH 235
SL S E TG++ +E+Q SD
Sbjct: 185 SLA-ESNCEGTGSS----EEEQDPSDK--------------------------------- 206
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LKH+L + Y + D+R+ ++ + GKLP + L WW H KWPYP+
Sbjct: 207 QLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 258
>gi|295149268|gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]
Length = 317
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y L+SA++ C ++ P ++ + ++ R R Y++ A G + D E
Sbjct: 58 KAQIASHPRYPSLVSAYIECRKVGAP-PEMASLLEEIGRRR-----YTS-AGGEIGADPE 110
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGESTGATMSD 192
LD+FM Y +L +KE+L + EA +E L +L G + ST +
Sbjct: 111 LDEFMESYCRVLQRYKEELSKPFD----EAASFLNSIEVQLSNLCKGCTTSSSTTTATGN 166
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+V + + + G + +ES+ S HELK L + Y + ++
Sbjct: 167 SPSDEVVGSSE---------EELSCGDVDASESQESGSRLADHELKEMLLKKYSGYLSNL 217
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R+E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 218 RKEFLKKRKKGKLPKDARLTLLDWWHAHYRWPYPT 252
>gi|115455613|ref|NP_001051407.1| Os03g0771500 [Oryza sativa Japonica Group]
gi|122246824|sp|Q10ED2.1|KNOS8_ORYSJ RecName: Full=Homeobox protein knotted-1-like 8; AltName:
Full=Homeobox protein OSH43
gi|5103727|dbj|BAA79225.1| knotted1-type homeobox protein OSH43 [Oryza sativa]
gi|108711297|gb|ABF99092.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549878|dbj|BAF13321.1| Os03g0771500 [Oryza sativa Japonica Group]
Length = 341
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 73/232 (31%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P DVL K +AV + LD+
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPP--------------DVLTKLTAVPAAQQLDEA 128
Query: 133 -----------------ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+LDQFM Y +L ++E+L++ + +EA +E L
Sbjct: 129 DGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLD 184
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH 235
SL S E TG++ +E+Q SD
Sbjct: 185 SLA-ESNCEGTGSS----EEEQDPSDK--------------------------------- 206
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LKH+L + Y + D+R+ ++ + GKLP + L WW H KWPYP+
Sbjct: 207 QLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 258
>gi|359485634|ref|XP_002273805.2| PREDICTED: homeobox protein SBH1-like, partial [Vitis vinifera]
Length = 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 38/239 (15%)
Query: 55 NNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR 114
+NS + +N D + KA+I+ HP Y +LL+A+V+C ++ P P++ A+L +
Sbjct: 91 SNSNTTNN---HDCTSCSMKAKIMAHPHYPRLLAAYVNCQKVGAP----PEVVARLEEAC 143
Query: 115 DVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
A V +D LDQFM Y +L ++++L + + EA++ +E
Sbjct: 144 ASEEAMGRSATSCVGEDPALDQFMEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQF 199
Query: 175 QSLTGVSPGESTGATMSD---DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
++LT V+P +S + + E++VD + D P +R
Sbjct: 200 KALT-VAPSDSVCGSYAGRVGSSEEEVDGNDTCID---------------PQAEDR---- 239
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELK +L + Y + +++E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 240 ----ELKGQLLRKYSGYLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 294
>gi|147800378|emb|CAN64264.1| hypothetical protein VITISV_033719 [Vitis vinifera]
Length = 359
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 38/239 (15%)
Query: 55 NNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR 114
+NS + +N D + KA+I+ HP Y +LL+A+V+C ++ P P++ A+L +
Sbjct: 92 SNSNTTNN---HDCTSCSMKAKIMAHPHYPRLLAAYVNCQKVGAP----PEVVARLEEAC 144
Query: 115 DVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
A V +D LDQFM Y +L ++++L + + EA++ +E
Sbjct: 145 ASEEAMGRSATSCVGEDPALDQFMEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQF 200
Query: 175 QSLTGVSPGESTGATMSD---DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
++LT V+P +S + + E++VD + D P +R
Sbjct: 201 KALT-VAPSDSVCGSYAGRVGSSEEEVDGNDTCID---------------PQAEDR---- 240
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELK +L + Y + +++E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 241 ----ELKGQLLRKYSGYLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 295
>gi|195637536|gb|ACG38236.1| homeobox protein OSH1 [Zea mays]
Length = 255
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRI-ATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I HP Y LLSA++ C ++ A P + + ++SR R A G + D
Sbjct: 2 KAQIASHPRYPSLLSAYIECRKVGAHP--HVTSLLEEVSRERRPDA-----GAGEIGVDP 54
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y +L +KE+L + EA ++ L L S G S AT +
Sbjct: 55 ELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDL--CSGGSSPAATATH 108
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+ S+ G D PD MG E L + HELK L + Y + +
Sbjct: 109 SDDMMGSSEDEQCSGDTDVPD-MG------QEHSSHLGD---HELKEMLLKKYSGCLSRL 158
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 159 RSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 193
>gi|86611375|gb|ABD14371.1| homeodomain protein Kn1 [Prunus dulcis]
Length = 384
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA+I+ HP Y +LL+++++C ++ P + + +++ + + + S+ + L +D
Sbjct: 125 KAKIMAHPHYHRLLASYINCQKVGAPPEVVARLEEACASAASIGQMMSSSSGSGCLGEDP 184
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST----GA 188
LDQFM Y +L ++++L + + EA++ +E ++LT S +S G
Sbjct: 185 ALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSDSAVCGDGL 240
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ E++VD + NF D P +R ELK +L + Y
Sbjct: 241 DRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSGY 277
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 278 LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 319
>gi|345649241|gb|AEO14151.1| STM1 protein [Eschscholzia californica subsp. californica]
Length = 362
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 114/220 (51%), Gaps = 35/220 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I+ HP Y +LL+++V+C ++ P + + K++ + + + + +A+ + G + +D
Sbjct: 111 RAKIMAHPYYTRLLASYVNCQKVGAPPEVVAKLE-EANATGEAMAR-TGSGTGCIGEDPA 168
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS---PGESTGATM 190
LDQFM Y +L ++++L + EA+M +E ++LT VS GE+
Sbjct: 169 LDQFMEAYCEMLTKYQQELTKPFE----EAMMFLSRIECQFKALT-VSDSVGGEAVNRNG 223
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S D++ +D++ N+ D P +R ELK +L + Y +
Sbjct: 224 SSDED--IDANDNYID---------------PQAEDR--------ELKGQLLRKYSGYLG 258
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E L+KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 259 SLKQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 298
>gi|242033113|ref|XP_002463951.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
gi|241917805|gb|EER90949.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
Length = 372
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Query: 49 APKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
AP + ++S GR D KA+IV HP Y +LL+A + C ++ P P+
Sbjct: 62 APLIHASSSVGGHGGRVADL-LDPIKAKIVSHPRYHRLLAAFLDCHKVGCP----PEAAE 116
Query: 109 QLSRSRDVLAKYSAVANGRVLD---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
+++ + + A G + D ELDQFM Y LL ++KE+L + +R EA
Sbjct: 117 EIAAAAREREAWQRAAVGDAHNTRPDPELDQFMESYSELLVAWKEELTRPLR----EAKE 172
Query: 166 ACWDLEQSLQSLTGVSPG-----------ESTGATMSDDDEDQVDSDTNFFDGSLDGPDS 214
+E L S+T P ++TG MSDDD+++ G ++ +
Sbjct: 173 FLTTVELQLNSITNTGPPMGALISSAAAEDNTGLDMSDDDQEEGS-------GGMEAEAA 225
Query: 215 MGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLK 274
+G P + ELK +L + Y + ++R+E+ +KR+ GKLP + L
Sbjct: 226 LGIDPCSDDK-----------ELKKQLLRKYSGCLGNLRKELCKKRKKGKLPKEARQKLL 274
Query: 275 AWWLSHAKWPYPT 287
+WW H +WPYP+
Sbjct: 275 SWWELHYRWPYPS 287
>gi|289655988|gb|ADD14042.1| class 1 KNOTTED-like transcription factor STM-like2 [Prunus
persica]
Length = 383
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA+I+ HP Y +LL+++++C ++ P + + +++ + + + S+ + L +D
Sbjct: 124 KAKIMAHPHYHRLLASYINCQKVGAPPEVVARLEEACASAASIGQMMSSSSGSGCLGEDP 183
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST----GA 188
LDQFM Y +L ++++L + + EA++ +E ++LT S +S G
Sbjct: 184 ALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSDSAVCGDGL 239
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ E++VD + NF D P +R ELK +L + Y
Sbjct: 240 DRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSGY 276
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 277 LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 318
>gi|255540617|ref|XP_002511373.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223550488|gb|EEF51975.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 328
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I HPLY +LL A++ C ++ P + +D R L+K + + D E
Sbjct: 88 RAKIAAHPLYPKLLQAYIDCQKVGAPPEMAYMLDE--IRQESDLSKRPSTITSCLGADPE 145
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA D+E L +L +T +
Sbjct: 146 LDEFMETYCDILVKYKSDLSRPFN----EATTFLNDIEAQLNTLCN-----TTTSRTHVS 196
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
DE SD + G L+ DS+ R+ ER ELK +L Q Y I ++
Sbjct: 197 DEAVGSSDEDISGGELEAQDSV-----------RANEER---ELKDKLLQKYSGYISTLK 242
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+E +K++ GKLP + +L WW H KWPYPT
Sbjct: 243 QEFSKKKKKGKLPKEARQILLNWWNIHYKWPYPT 276
>gi|162459056|ref|NP_001105508.1| liguleless3 [Zea mays]
gi|4240539|gb|AAD13611.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
gi|323388555|gb|ADX60082.1| Homeobox HB transcription factor CDS [Zea mays]
gi|414877207|tpg|DAA54338.1| TPA: liguleless3 [Zea mays]
Length = 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 24/215 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRI-ATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I HP Y LLSA++ C ++ A P + + ++SR R A G + D
Sbjct: 42 KAQIASHPRYPSLLSAYIECRKVGAHP--HVTSLLEEVSRERRPDA-----GAGEIGVDP 94
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y +L +KE+L + EA ++ L L S G S AT +
Sbjct: 95 ELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDL--CSGGSSPAATATH 148
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+ S+ G D PD MG E L + HELK L + Y + +
Sbjct: 149 SDDMMGSSEDEQCSGDTDVPD-MG------QEHSSHLGD---HELKEMLLKKYSGCLSRL 198
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 199 RSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 233
>gi|351734506|ref|NP_001237352.1| KNT1 [Glycine max]
gi|114150002|gb|ABI51619.1| KNT1 [Glycine max]
Length = 362
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P P++ +L + A A + +D
Sbjct: 110 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVGRLEEACASAAVIMAGGTASIGEDPA 165
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LDQFM Y +L ++++L + + EA++ +E +SLT S ++T + D
Sbjct: 166 LDQFMEAYCEMLIKYEQELSKPFK----EAMLFLQRIECQFKSLTISSSLDTTACNEAID 221
Query: 194 ---DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
+ VD TN D + ELK +L + Y+ +
Sbjct: 222 RNGPSEDVDVQTNIIDPQAED-----------------------QELKGQLLRKYRGYLG 258
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E +KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 259 SLKQEFTKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQ 298
>gi|340764132|gb|AEK69290.1| INVAGINATA-like protein [Linaria vulgaris]
Length = 346
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL++ V+C +I P + +++ S + + + G +D
Sbjct: 92 KAKIMAHPHYHKLLASFVNCQKIGAPAEVTARLEEACSSAASIGRGHGTSCIG---EDPA 148
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD- 192
LDQFM Y +L +++ L + R EA++ +E ++LT S S D
Sbjct: 149 LDQFMEAYCEMLTKYEQGLSKPFR----EAMLFLSRMECQFKALTVSSSDNSACGDAMDR 204
Query: 193 --DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
E++ D + NF D P +R ELK +L + Y +
Sbjct: 205 QGSSEEEADMNNNFID---------------PQAEDR--------ELKGQLLRKYSGYLG 241
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 242 SLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 281
>gi|326910891|gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
Length = 318
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y L++A++ C ++ P ++ + ++ R R Y++ G + D E
Sbjct: 61 KAQIANHPRYPSLVAAYIECRKVGAP-PEMASLLEEIGRER-----YTSAGCGEIGADPE 114
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGESTGATMSD 192
LD+FM Y +L +KE+L + EA +E L +L G + ST +
Sbjct: 115 LDEFMESYCRVLQRYKEELSKPFN----EAASFLNSIEMQLSNLCKGRTTSSSTTGGTGN 170
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D++ + + + G + +E + S HELK L + Y + ++
Sbjct: 171 SPSDEMVGSSE---------EELSCGDVDASECQESGSRLADHELKEMLLKKYSGYLSNL 221
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R+E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 222 RKEFLKKRKKGKLPKDARLTLLDWWHTHYRWPYPT 256
>gi|218193821|gb|EEC76248.1| hypothetical protein OsI_13687 [Oryza sativa Indica Group]
Length = 357
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA------QLSRSRDVLAKYSAVANGR 127
KAEI+ HP LL+A++ C ++ P D L K+ A QL + +
Sbjct: 82 KAEIMSHPQCSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDD 141
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ D +LDQFM Y +L ++E+L++ + +EA +E L S+ S E TG
Sbjct: 142 DVPDHQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSMVETQLDSIA-ESNCEGTG 196
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
+ S++++D + D S +LKH+L Y
Sbjct: 197 S--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMKYGG 229
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPT 287
+ D+R+E ++ + GKLP + L WW L + KWPYP+
Sbjct: 230 SLGDLRQEFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPS 270
>gi|3046821|dbj|BAA25546.1| NTH15 [Nicotiana tabacum]
Length = 342
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LLSA+V+C +I P P++ A+L A + G + +D LDQF
Sbjct: 92 MAHPHYPRLLSAYVNCQKIGAP----PEVVARLEEVCATSATIGRNSGGIIGEDPALDQF 147
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDD--- 194
M Y +L ++++L + + EA++ +E ++LT S ES A D
Sbjct: 148 MEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLTSSSESVAALGEAIDRNG 203
Query: 195 --EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
E++VD + F D + ELK +L + Y + +
Sbjct: 204 SSEEEVDVNNGFIDPQAED-----------------------QELKGQLLRKYSGYLGSL 240
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 241 KQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 278
>gi|388512137|gb|AFK44130.1| unknown [Lotus japonicus]
Length = 299
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-VLDDK 132
K++I HPLY L+SA++ C ++ P + P ++ +++R S+ GR + DD
Sbjct: 57 KSQIASHPLYPNLVSAYIECQKVGAPTELAPFLE-EIAREN----HNSSNGFGREIGDDP 111
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y +L ++++L + EA + D+E L L + T SD
Sbjct: 112 ELDEFMESYCEVLQRYQQELFKPFN----EATLFLCDIESQLSELC-----KGTLTMPSD 162
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
++ + T+ D + G + E S M + ELK L + Y + +
Sbjct: 163 NNRSDEAAGTS--------EDELSCGKVEAVE--YSGMRQGDQELKEMLLRKYGGYLSSL 212
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R+E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 213 RKEFLKKRKKGKLPKDARKTLTDWWNTHYRWPYPT 247
>gi|302398857|gb|ADL36723.1| HD domain class transcription factor [Malus x domestica]
Length = 397
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y LL A++ C R+ P D + ++ ++R +
Sbjct: 119 NDDHSLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLS--VARQEFEARQ 176
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 177 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 232
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +E+Q +S G + P+ + P +R
Sbjct: 233 NNNAPPLRIFSPSEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--- 278
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 279 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 332
>gi|6016217|sp|O04135.1|KNAP2_MALDO RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=KNAP2
gi|1946220|emb|CAA96511.1| kn1-like protein [Malus x domestica]
Length = 397
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y LL A++ C R+ P D + ++ ++R +
Sbjct: 119 NDDHSLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLS--VARQEFEARQ 176
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 177 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 232
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +E+Q +S G + P+ + P +R
Sbjct: 233 NNNAPPLRIFSPSEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--- 278
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 279 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 332
>gi|300174952|dbj|BAJ10711.1| shoot meristemless ortholog [Polypleurum stylosum]
Length = 352
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 57/299 (19%)
Query: 12 LVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAP------KNNKNNSASN----- 60
+++P + PP+ HHHQN + +P + N N +A++
Sbjct: 27 MIIPQSPNALFPPS----NTSFHHHQNKSKALHETLSSPSMAFDSQMNVNATANSTGAGC 82
Query: 61 ---DNGRAEDWETV-KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV 116
DN E T KA+I+ HP Y +LLSA+V+C +I P P++ A+L +R
Sbjct: 83 FFVDNDVHEGINTTCSIKAKIMSHPHYNRLLSAYVNCQKIGAP----PEVVARLEEARAA 138
Query: 117 LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS 176
A ++G + D LDQFM Y +L ++++L + ++ EA++ +E ++
Sbjct: 139 AAAALGPSDGCLGQDPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVEYQFKA 194
Query: 177 LTGVSP-----GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
LT SP GE S D+E D + F D P ++
Sbjct: 195 LTVSSPNSGYSGEGNERNASSDEEG--DGNNVFID---------------PQAEDQ---- 233
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 234 ----ELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWNRHYKWPYPSESQ 288
>gi|31745219|gb|AAP68879.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
Group]
Length = 353
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA------QLSRSRDVLAKYSAVANGR 127
KAEI+ HP Y LL+A++ C ++ P D L K+ A QL + +
Sbjct: 82 KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDD 141
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ D +LDQFM Y +L ++E+L++ + +EA + ++SL S E TG
Sbjct: 142 DVPDHQLDQFMDAYCSMLTRYREELERPI----LEAA----EFFSLIRSLVN-SNCEGTG 192
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
+ S++++D + D S +LKH+L Y
Sbjct: 193 S--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMKYGG 225
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPT 287
+ D+R+ ++ + GKLP + L WW L + KWPYP+
Sbjct: 226 SLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPS 266
>gi|20977642|gb|AAM28231.1| knotted-1-like protein 1 [Helianthus annuus]
Length = 362
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 45/230 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR------ 127
KA+I+ HP Y +LLSA+++C +I P + + +++ S V+A S+ + G
Sbjct: 95 KAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRAS--VVAAMSSCSGGAGTSDGS 152
Query: 128 -------VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL--- 177
+ D LDQFM Y +L ++++L + + EA++ +E +++
Sbjct: 153 GGGMNMIIGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISIS 208
Query: 178 TGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHEL 237
T S G G + E++VD + N D P +R EL
Sbjct: 209 TSDSAGGEGGMDKNGSSEEEVDVNNNLID---------------PQAEDR--------EL 245
Query: 238 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 246 KGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 295
>gi|6942297|gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Triticum aestivum]
gi|57157673|dbj|BAD83801.1| KN1 homeobox protein [Triticum aestivum]
Length = 362
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 32/245 (13%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P + L ++
Sbjct: 85 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAPPEVLARL 139
Query: 107 DAQLSRSRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
A ++D+ L + +A+ + + ELDQFM Y +L ++E+L + ++ AME +
Sbjct: 140 TA---VAQDLELRQRTALGSFGTATEPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLR 195
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTES 225
SL S++G S + S++D++ +T + G D
Sbjct: 196 RVETQLNSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVD------------ 242
Query: 226 ERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPY 285
ELKH L + Y + +++E+ +K++ GKLP D L +WW H KWPY
Sbjct: 243 ---------QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPY 293
Query: 286 PTVSR 290
P+ S+
Sbjct: 294 PSESQ 298
>gi|414872575|tpg|DAA51132.1| TPA: knotted1 [Zea mays]
Length = 343
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 31/236 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 71 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 124
Query: 113 SRDVLAKYSAVANG-RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ G + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 125 AQEVEARQRTALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQL 183
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 184 NSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEVDAHGVD------------------ 224
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 225 ---QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 277
>gi|300174940|dbj|BAJ10705.1| shoot meristemless ortholog [Hydrobryum japonicum]
Length = 351
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 38/223 (17%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HPLY +LLSA+V+C ++ P P++ A+L +R A ++ +
Sbjct: 96 TCSIKAKIMSHPLYNRLLSAYVNCQKVGAP----PEVVARLEEARAAAAAALGPSDACLG 151
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP-----GE 184
D LDQFM Y +L ++++L + ++ EA++ +E ++LT SP GE
Sbjct: 152 QDPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVEYQFKALTVSSPNSGYSGE 207
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
+ S D+E D + F D + ELK +L +
Sbjct: 208 ANERNASSDEEG--DGNNVFIDPQAED-----------------------QELKGQLLRR 242
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 243 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWNRHYKWPYPS 285
>gi|194690304|gb|ACF79236.1| unknown [Zea mays]
Length = 359
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 31/236 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 87 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 140
Query: 113 SRDVLAKYSAVANG-RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ G + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 141 AQEVEARQRTALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQL 199
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 200 NSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEVDAHGVD------------------ 240
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 241 ---QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>gi|162458085|ref|NP_001105436.1| homeotic protein knotted-1 [Zea mays]
gi|123183|sp|P24345.1|KN1_MAIZE RecName: Full=Homeotic protein knotted-1
gi|22351|emb|CAA43605.1| Kn1 [Zea mays]
gi|30267712|gb|AAP21616.1| KNOTTED1 [Zea mays]
gi|32351475|gb|AAP76321.1| homeobox transcription factor KNOTTED1 [Zea mays]
gi|195624480|gb|ACG34070.1| homeobox protein OSH1 [Zea mays]
gi|414872576|tpg|DAA51133.1| TPA: knotted1 [Zea mays]
gi|227607|prf||1707304A Knotted-1 gene
Length = 359
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 31/236 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 87 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 140
Query: 113 SRDVLAKYSAVANG-RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ G + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 141 AQEVEARQRTALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQL 199
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 200 NSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEVDAHGVD------------------ 240
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 241 ---QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>gi|242033115|ref|XP_002463952.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
gi|241917806|gb|EER90950.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
Length = 360
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 59 SNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQL----SRSR 114
S+ + A D E +K K I+ HP Y LL+A++ C ++ P D ++ A +R R
Sbjct: 94 SSSSPYAGDLEAIKAK--IISHPHYYSLLAAYLECKKVGAPPDVSARLTAMAQELEARQR 151
Query: 115 DVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
L+ A + ELDQFM Y +L FKE+L + ++ AME + SL
Sbjct: 152 TALSGLGAAT------EPELDQFMEAYHEMLVKFKEELTRPLQ-EAMEFMRRVESQLNSL 204
Query: 175 QSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
S++G S + S++D++ +T + + G D
Sbjct: 205 -SISGRSLRNILSSGSSEEDQEGSGGETELPEVDVHGVD--------------------- 242
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 243 QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDLHYKWPYPS 295
>gi|195642508|gb|ACG40722.1| homeobox protein OSH1 [Zea mays]
Length = 359
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 31/236 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 87 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 140
Query: 113 SRDVLAKYSAVANG-RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ G + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 141 AQEVEARQRTALGGLAAATEPELDQFMEAYHEILVKFREELTRPLQ-EAMEFMRRVESQL 199
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 200 NSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEVDAHGVD------------------ 240
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 241 ---QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>gi|3327275|dbj|BAA31701.1| PKn3 [Ipomoea nil]
Length = 358
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 40/252 (15%)
Query: 52 NNKNNSASNDNGRAEDWETVK--CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
+N NS N G E + KA+I HPLY L+SA++ C ++A P P++ A
Sbjct: 76 DNYYNSDENSKGGGGGVEMMSDVVKAQIASHPLYPNLVSAYIQCRKVAAP----PEMAAL 131
Query: 110 LSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQL-----QQHVRVHAMEAV 164
L V + + D ELD+FM Y +LY +KE+L + + ++E+
Sbjct: 132 LEELSKVT---QPITTAEIGADPELDEFMESYCEVLYKYKEELSKPFDEAKTFLSSIESQ 188
Query: 165 MA--CWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVP 222
++ C D + S G+ G T +D + G +
Sbjct: 189 LSNLCKDTFPT-TSFNSYHSGDEAGGTSEED---------------------LSCGEVEV 226
Query: 223 TESERSLMERVR--HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
ES+ L ++K L + Y + +R+E L+KR+ GKLP D L WW SH
Sbjct: 227 AESQEHLNNNSEGDQQIKEMLMRKYSGYLSSLRKEFLKKRKKGKLPKDARVALLDWWNSH 286
Query: 281 AKWPYPTVSRTN 292
+WPY T N
Sbjct: 287 YRWPYTTEEEKN 298
>gi|6942300|gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Triticum aestivum]
gi|6942302|gb|AAF32400.1|AF224500_1 KNOTTED-1-like homeobox protein d [Triticum aestivum]
gi|57157675|dbj|BAD83802.1| KN1 homeobox protein [Triticum aestivum]
gi|57157677|dbj|BAD83803.1| KN1 homeobox protein [Triticum aestivum]
Length = 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P + L ++
Sbjct: 86 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAPPEVLARL 140
Query: 107 DAQLSRSRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVM 165
A ++D+ L + +A+ + + ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 141 TA---VAQDLELRQRTALGSLGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAME 193
Query: 166 ACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTES 225
+E L SL+ + +EDQ S G + P+ G
Sbjct: 194 FLRRVETQLNSLSISGRSLRNILSSGSSEEDQEGSG-----GETELPEIDAHG------- 241
Query: 226 ERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPY 285
V ELKH L + Y + +++E+ +K++ GKLP D L +WW H KWPY
Sbjct: 242 -------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPY 294
Query: 286 PTVSR 290
P+ S+
Sbjct: 295 PSESQ 299
>gi|300174964|dbj|BAJ10717.1| shoot meristemless ortholog [Terniopsis minor]
Length = 379
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 31/219 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + + +R+ + V + + D
Sbjct: 126 KAKIMSHPHYTRLLAAYVNCQKVGAPPEVV--ARLEEARAAAAMGPAGVVGSSCIGLDPA 183
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT--MS 191
LDQFM Y +L ++++L + ++ EA++ +E +SLT SP +G +
Sbjct: 184 LDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRVEYQFKSLTVSSPNSDSGDANDRN 239
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
E++ + + F D + HELK +L + Y +
Sbjct: 240 ASSEEETEGNNMFIDPQAE-----------------------DHELKGQLLRRYSGYLGS 276
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 277 LKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 315
>gi|297813269|ref|XP_002874518.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
lyrata]
gi|297320355|gb|EFH50777.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 37/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P + + +I A Q +R S A+ R D
Sbjct: 131 KAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDRITAARQDFEARQQRPTPSVSASSR---D 187
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C + + L + G
Sbjct: 188 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLC---QSPIHILNNPADG 243
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S G SD++++ N G + P+ + P +R ELK+ L +
Sbjct: 244 KSEGMGSSDEEQE------NTSGGETELPE------IDPRAEDR--------ELKNHLLK 283
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 284 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 329
>gi|57116574|gb|AAW33775.1| STM1 protein [Streptocarpus saxorum]
Length = 353
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 41/225 (18%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR--VLDD 131
K++I+ HP Y +LL+A+VSC +I P + + K++ + A + N R V +D
Sbjct: 98 KSKIIAHPHYPRLLAAYVSCQKIGAPPEVVAKLEEVCAS-----ATSTGCRNERSCVGED 152
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT-- 189
LDQFM Y +L ++++L + + +A++ E ++LT +S +GA
Sbjct: 153 PALDQFMEAYCGMLTKYEQELSKPFK----DAMLFFSRFECQFKALT-LSHSADSGACDE 207
Query: 190 ----MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
+ E++ D + +F D + HELK +L + Y
Sbjct: 208 AVLEQNGSSEEEFDVNNSFIDPQAE-----------------------DHELKGQLLRKY 244
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ ++++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 245 SGYLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 289
>gi|6016215|sp|O04134.1|KNAP1_MALDO RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=KNAP1
gi|1946218|emb|CAA96510.1| kn1-like protein [Malus x domestica]
Length = 398
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 34/239 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y L+ A++ C R+ P D +P++ ++R +
Sbjct: 120 NDDHSLSSNEVEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLS--VARQEFEARQ 177
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 178 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 233
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +++Q +S G + P+ + P +R
Sbjct: 234 NNNAPPLRIFSPSEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--- 279
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+ S
Sbjct: 280 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSES 333
>gi|22074785|gb|AAM47027.1| shootmeristemless-like [Petunia x hybrida]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 35/225 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQLSRSRDVLAKYSAVANGRVLD 130
KA+I+ HP Y +LL+A+++C +I P V +L ++ A + N + +
Sbjct: 86 KAKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEEVCATSAHMGRNGGGGGGGGNNVIGE 145
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D LDQFM Y +L ++++L + + EA++ +E ++LT S ES A
Sbjct: 146 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLASTSESVAAFG 201
Query: 191 SDDD-----EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
D E++VD + + D P +R ELK +L + Y
Sbjct: 202 EAMDRNGSSEEEVDVNNSLVD---------------PQAEDR--------ELKGQLLRKY 238
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 239 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 283
>gi|94982884|gb|ABF50222.1| knox-like protein [Solanum tuberosum]
Length = 322
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HPLY LLSA++ C ++ P + I ++S ++++ S+ + + D E
Sbjct: 69 KAQIANHPLYPNLLSAYLQCRKVGAP-QGMTSILEEISNENNLIS--SSCHSSEIGADPE 125
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +KE+ + EA +++ L SL + ST
Sbjct: 126 LDKFMESYCAVLVKYKEEPSKPFD----EATSFLNNIKSQLSSLCKDNLITSTS------ 175
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+S+ N+ G G ++ +ELK L + Y + +R
Sbjct: 176 ----FNSNNNYISDEAGGTSEEDLGCEEMEAADSPAYREGDNELKEMLMRKYSGYLSSLR 231
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
+E L+KR+ GKLP + +L WW +H +WPYPT N
Sbjct: 232 KEFLKKRKKGKLPKEARIVLLDWWNTHYRWPYPTEEEKN 270
>gi|388556558|ref|NP_001253999.1| homeobox protein knotted-1-like 2-like [Glycine max]
gi|302135385|gb|ADK94035.1| KNOX-like DNA-binding protein [Glycine max]
Length = 385
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 36/228 (15%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP Y +L A++ C +I P P++ A+++ ++ + S+V +
Sbjct: 122 EVEAIKAKIIAHPQYSNVLEAYMDCQKIGAP----PEVVARMAAAKQEFEARQRSSVGSR 177
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-----VS 181
D ELDQFM Y +L ++E+L + ++ EA+ +E L L S
Sbjct: 178 ETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLCNGPVRIFS 233
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
+ GA S++D+D +T + + P +R ELK+ L
Sbjct: 234 DDKCEGAGSSEEDQDNSGGETELPE-------------IDPRAEDR--------ELKNHL 272
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ Y + +++E+ +K++ GKLP D L WW H KWPYP+ S
Sbjct: 273 LKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSES 320
>gi|326525409|dbj|BAK07974.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 364
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 34/246 (13%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P P++
Sbjct: 87 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEV 137
Query: 107 DAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ AME +
Sbjct: 138 SARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFL 196
Query: 165 MACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTE 224
SL S++G S S++D++ +T + G D
Sbjct: 197 RRVETQLNSL-SISGRSLRNILSTGSSEEDQEGSGGETELAEIDAHGVD----------- 244
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWP
Sbjct: 245 ----------QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWP 294
Query: 285 YPTVSR 290
YP+ S+
Sbjct: 295 YPSESQ 300
>gi|57116570|gb|AAW33773.1| STM1 protein [Streptocarpus dunnii]
Length = 356
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I+ HP Y +LL+A+V+C +I P + + K++ + + + + G +D
Sbjct: 101 KSKIMAHPHYPRLLAAYVNCQKIGAPPEVVAKLEEACASTITIGGRNERSCVG---EDPA 157
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT---- 189
LDQFM Y +L ++++L + + EA++ +E ++LT +S +GA
Sbjct: 158 LDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIECQFKALT-LSHSSDSGACGEAV 212
Query: 190 --MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
+ E++ D + +F D P +R ELK +L + Y
Sbjct: 213 MERNGSSEEEFDVNNSFID---------------PQAEDR--------ELKGQLLRRYSG 249
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ ++++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 250 YLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 292
>gi|3024086|sp|Q43484.1|KNOX3_HORVU RecName: Full=Homeobox protein KNOX3; AltName: Full=Hooded protein
gi|793847|emb|CAA58503.1| Knox3 [Hordeum vulgare]
Length = 364
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 34/246 (13%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P P++
Sbjct: 87 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEV 137
Query: 107 DAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 138 SARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAM 193
Query: 165 MACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTE 224
+E L SL+ + +EDQ S G + P+ G
Sbjct: 194 EFLRRVETQLNSLSISGRSLRNILSTGSSEEDQEGSG-----GETELPEIDAHG------ 242
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
V ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWP
Sbjct: 243 --------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWP 294
Query: 285 YPTVSR 290
YP+ S+
Sbjct: 295 YPSESQ 300
>gi|4099828|gb|AAD00692.1| homeobox transcription factor SKN2 [Picea mariana]
Length = 442
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 37/228 (16%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 177 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 234
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----VSPG- 183
D ELDQFM Y +L + E+L + + EA+ +E L SL+ +SP
Sbjct: 235 --DPELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLNSLSKGTIRISPSA 288
Query: 184 ----ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKH 239
++ G S++ ED +T+F E + +E ELK
Sbjct: 289 ENDEKTEGGASSEEVEDGSGGETDF------------------QEVDHHAVED--RELKD 328
Query: 240 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 329 HLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPS 376
>gi|297741767|emb|CBI32996.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+ +C ++ P P++ A+L + A + +D LDQF
Sbjct: 1 MAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASEAAMVRTGTSCIGEDPALDQF 56
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDD--- 194
M Y +L ++++L + + EA++ +E ++LT VS +S G D +
Sbjct: 57 MEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALT-VSSSDSAGGEGLDRNGSS 111
Query: 195 EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIRE 254
E++VD + NF D P +R ELK +L + Y + +++
Sbjct: 112 EEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSGYLSSLKQ 148
Query: 255 EILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 149 EFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 184
>gi|300676311|gb|ADK26525.1| HERMIT/STM protein [Petunia x hybrida]
Length = 347
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 35/225 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQLSRSRDVLAKYSAVANGRVLD 130
KA+I+ HP Y +LL+A+++C +I P V +L ++ A + N + +
Sbjct: 86 KAKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEELCATSAHMGRNGGGGGGGGNNVIGE 145
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D LDQFM Y +L ++++L + + EA++ +E ++LT S ES A
Sbjct: 146 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLASTSESVAAFG 201
Query: 191 SDDD-----EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
D E++VD + + D P +R ELK +L + Y
Sbjct: 202 EAMDRNGSSEEEVDVNNSLVD---------------PQAEDR--------ELKGQLLRKY 238
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 239 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 283
>gi|8778590|gb|AAF79598.1|AC007945_18 F28C11.2 [Arabidopsis thaliana]
Length = 344
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + D E
Sbjct: 83 KAKIACHPSYPRLLQAYIDCQKVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGADPE 140
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGESTGATMSD 192
LD+FM Y +L +K L + EA +E L++L TGV MS
Sbjct: 141 LDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSGGMSP 196
Query: 193 DDEDQVD---SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
+ + ++ N DG + + + G E R E +LK L + + +I
Sbjct: 197 HGDKTISPLLTNDNGEDGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGSRI 254
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 255 STLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 292
>gi|449508861|ref|XP_004163429.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 346
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HPL+ +LL+A+V+C ++ P P++ A+L ++ V A S A G
Sbjct: 95 TSTSKAKIMAHPLFPRLLTAYVNCQKVGAP----PEVVARLEQACAV-ATGSCRAAGHG- 148
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
+D LDQFM Y +L ++++L + + EA++ +E L++ S G
Sbjct: 149 NDPALDQFMEAYCEMLTKYEQELTKPFK----EAMLFFSRIESQLKAEAVSSDGFELVGQ 204
Query: 190 MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
E +VD + N+ D + ELK +L + Y +
Sbjct: 205 NECSKEIEVDMNENYIDPQAE-----------------------VKELKGQLLRKYSGYL 241
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 242 GSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQ 282
>gi|449453537|ref|XP_004144513.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 350
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 33/221 (14%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HPL+ +LL+A+V+C ++ P P++ A+L ++ V A S A G
Sbjct: 95 TSTSKAKIMAHPLFPRLLTAYVNCQKVGAP----PEVVARLEQACAV-ATGSCRAAGHG- 148
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT 189
+D LDQFM Y +L ++++L + + EA++ +E L++ S G
Sbjct: 149 NDPALDQFMEAYCEMLTKYEQELTKPFK----EAMLFFSRIESQLKAEAVSSDGFELVGQ 204
Query: 190 MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
E +VD + N+ D + ELK +L + Y +
Sbjct: 205 NECSKEIEVDMNENYIDPQAE-----------------------VKELKGQLLRKYSGYL 241
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 242 GSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQ 282
>gi|3928843|gb|AAC84001.1| homeobox protein [Picea abies]
Length = 434
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 37/228 (16%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----VSPG- 183
D ELDQFM Y +L + E+L + + EA+ +E L SL+ +SP
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLNSLSKGTIRISPSA 280
Query: 184 ----ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKH 239
++ G S++ ED +T+F E + +E ELK
Sbjct: 281 ENDEKTEGGASSEEVEDGSGGETDF------------------QEVDHHAVED--RELKD 320
Query: 240 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 321 HLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPS 368
>gi|239819334|gb|ACS28249.1| BREVIPEDICELLUS [Brassica rapa]
Length = 383
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P + + KI A Q +R S A R D
Sbjct: 119 KAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAARQEFEARQQRPTASVTALSR---D 175
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + + AME + M C L + G S G
Sbjct: 176 PELDQFMEAYCDMLVKYREELTRPIE-EAMEYIRRIESQISMLCQGPIHILNNPDGKSEG 234
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
M DE+Q D N G + P+ + P +R ELK+ L +
Sbjct: 235 ------MESSDEEQ---DNNNSGGEAELPE------IDPRAEDR--------ELKNHLLK 271
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 272 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 317
>gi|57116572|gb|AAW33774.1| STM1 protein [Streptocarpus rexii]
Length = 358
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I+ HP Y +LL+A+V+C +I P + + K++ + + + + G +D
Sbjct: 103 KSKIMAHPHYPRLLAAYVNCQKIGAPPEVVAKLEEACASTITIGGRNERSCVG---EDPA 159
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGAT---- 189
LDQFM Y +L ++++L + + EA++ +E ++LT +S +GA
Sbjct: 160 LDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIECQFKALT-LSHSSDSGACGEAV 214
Query: 190 --MSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
+ E++ D + +F D P +R ELK +L + Y
Sbjct: 215 LERNGSSEEEFDVNNSFID---------------PQAEDR--------ELKGQLLRRYSG 251
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ ++++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 252 YLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 294
>gi|115461893|ref|NP_001054546.1| Os05g0129700 [Oryza sativa Japonica Group]
gi|75139800|sp|Q7GDL5.1|KNOSA_ORYSJ RecName: Full=Homeobox protein knotted-1-like 10; AltName:
Full=Homeobox protein HOS9; AltName: Full=Homeobox
protein OSH71; AltName: Full=Homeobox protein
knotted-1-like 2; Short=Oskn2
gi|221272025|sp|A2Y007.2|KNOSA_ORYSI RecName: Full=Homeobox protein knotted-1-like 10; AltName:
Full=Homeobox protein HOS9; AltName: Full=Homeobox
protein OSH71; AltName: Full=Homeobox protein
knotted-1-like 2; Short=Oskn2
gi|2935573|gb|AAC32817.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
gi|4887610|dbj|BAA77818.1| HOS9 [Oryza sativa Japonica Group]
gi|5103729|dbj|BAA79226.1| knotted1-type homeobox protein OSH71 [Oryza sativa]
gi|51854371|gb|AAU10751.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
gi|113578097|dbj|BAF16460.1| Os05g0129700 [Oryza sativa Japonica Group]
gi|215767229|dbj|BAG99457.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196023|gb|EEC78450.1| hypothetical protein OsI_18312 [Oryza sativa Indica Group]
Length = 311
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA + L SL G +P +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPT-----D 162
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+ DE S+ G D D FG E L + HELK L + Y +
Sbjct: 163 NSDEMVGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSR 212
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 213 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 248
>gi|300676309|gb|ADK26524.1| HERMIT-like protein 3 [Petunia x hybrida]
Length = 331
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 26/233 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS--RDVLAKYSAVANGRVLDD 131
KA+I HPLY L+SA++ C ++ P ++ I ++S+ + + + +S++ G D
Sbjct: 61 KAQIANHPLYPNLVSAYLQCRKVGAP-HEMASILEEISKENHQPISSCHSSIEIGT---D 116
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT------GVSPGES 185
ELD+FM Y +L +KE+L + EA ++E L +L +
Sbjct: 117 PELDEFMESYCAVLLKYKEELSKPFD----EATTFLNNIESQLTNLCKDNLITSTTTSSF 172
Query: 186 TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
DE SD + G ++ D G P E +ELK L + Y
Sbjct: 173 NSNNYLSGDEAGGTSDEDICCGEMEATD----GQESPANREG------ENELKEMLMRKY 222
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAIS 298
+ +R++ L+KR+ GKLP D + L WW +H +WPYPT N I+
Sbjct: 223 SGYLSSLRKDFLKKRKKGKLPKDARTALLDWWNTHYRWPYPTEEEKNRLSEIT 275
>gi|239819336|gb|ACS28250.1| BREVIPEDICELLUS [Brassica oleracea]
Length = 380
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANG 126
+T KA+I+ HP Y LL A++ C +I P + + KI A Q +R S A
Sbjct: 111 DTESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAARQEFEARQQRPTASVTALS 170
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLT 178
R D ELDQFM Y +L ++E+L + + AME + M C Q +
Sbjct: 171 R---DPELDQFMEAYCDMLVKYREELTRPIE-EAMEYIRRIESQISMLC----QGPIHIL 222
Query: 179 GVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 238
G+S G SD+++D +S G + P+ + P +R ELK
Sbjct: 223 NNPDGKSEGIESSDEEQDNNNSG-----GEAELPE------IDPRAEDR--------ELK 263
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ L + Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 264 NHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 314
>gi|540536|dbj|BAA03959.1| homeobox protein [Oryza sativa Japonica Group]
Length = 361
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 31/240 (12%)
Query: 53 NKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR 112
K AS A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 86 GKAKEASASASYAPDVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEVAARLTA 139
Query: 113 -SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDL 170
++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ AME + +
Sbjct: 140 VAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLRRV-ET 197
Query: 171 EQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
+ + S++G S + S++D++ +T + G D
Sbjct: 198 QLNTLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVD----------------- 240
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
ELKH L + Y + +++E+ +K++ GKLP D L WW H KWPYP+ S+
Sbjct: 241 ----QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQ 296
>gi|350537947|ref|NP_001233807.1| homeotic protein knotted-1 [Solanum lycopersicum]
gi|3023974|sp|Q41330.1|KN1_SOLLC RecName: Full=Homeotic protein knotted-1; Short=TKN1
gi|1256575|gb|AAC49251.1| Knotted 1 (TKn1) [Solanum lycopersicum]
gi|1588258|prf||2208273A Knotted-1 gene
Length = 355
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 38/248 (15%)
Query: 51 KNNKNNSASNDNGRAEDWETVKC-KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
+N+ ++S G A E ++ KA+I+ HP LL A++ C ++ P P++ A+
Sbjct: 71 RNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVAAR 126
Query: 110 LSRSRDVLA--KYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
LS R + ++ + V D ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 127 LSAVRQEFEARQRRSLTDRDVSKDPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFM 182
Query: 168 WDLEQSLQSLTGV------SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLV 221
+E L L S + G S++D+D +T P+ +
Sbjct: 183 QKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDNSGGETEL-------PE------ID 229
Query: 222 PTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHA 281
P +R ELK+ L + Y + +++E+ +K++ GKLP D L WW H
Sbjct: 230 PRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHY 281
Query: 282 KWPYPTVS 289
KWPYP+ S
Sbjct: 282 KWPYPSES 289
>gi|144905100|dbj|BAF56426.1| SHOOTMERISTEMLESS-like protein [Ruscus aculeatus]
Length = 321
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 43/248 (17%)
Query: 49 APKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
AP+ N N ED++ KA+I+ HP Y +LLSA+++C ++ P + + +++
Sbjct: 29 APQQNPN----------EDYDNNILKAKIMSHPHYPKLLSAYINCQKVGAPPEVVARLEE 78
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACW 168
S S + S+ ++ V D LDQFM Y +L ++++L + + EA+M
Sbjct: 79 ACSSSLMIGRAASSSSSSAVGGDPALDQFMEAYCEMLTKYEQELSKPFK----EAMMFLS 134
Query: 169 DLEQSLQSLTGVSPGESTGATMSDD------DEDQVDSDTNFFDGSLDGPDSMGFGPLVP 222
++ +SL+ S T +++ D E+ VD N+ D P
Sbjct: 135 RIDAQFKSLSLSSSSPPTTNSLNQDLERNNSSEEDVDVSENYVD---------------P 179
Query: 223 TESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAK 282
+R ELK +L + Y + +++E L+KR+ GKLP + L WW H K
Sbjct: 180 QAEDR--------ELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYK 231
Query: 283 WPYPTVSR 290
WPYP+ S+
Sbjct: 232 WPYPSESQ 239
>gi|239616354|gb|ACR83812.1| brevipedicellus [Brassica napus]
Length = 358
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 37/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P + + KI A Q +R S A R D
Sbjct: 94 KAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAATQEFEARQQRPTASVTALSR---D 150
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + + AME + M C L + G S G
Sbjct: 151 PELDQFMEAYCDMLVKYREELTRPIE-EAMEYIRRIESQISMLCQGPIHILNNPDGKSEG 209
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
M DE+Q D N G + P+ + P +R ELK+ L +
Sbjct: 210 ------MESSDEEQ---DNNNSGGEAELPE------IDPRAEDR--------ELKNHLLK 246
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 247 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 292
>gi|357111616|ref|XP_003557608.1| PREDICTED: homeobox protein knotted-1-like 12-like [Brachypodium
distachyon]
Length = 350
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
V HP Y LL+A++ C ++ P + + K+ A + AK + + D ELDQF
Sbjct: 94 VAHPQYSALLAAYLDCQKVGAPPEVMEKLTA-------MAAKLPSPGHHEQRGDPELDQF 146
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG--ATMSDDDE 195
M Y +L ++E+L + + EA+ +E L S+TG G S+ + ++D
Sbjct: 147 MEAYCNMLAKYREELTRPIE----EAMEFLKRVEAQLDSITGAGHGGSSARLSLLADGKS 202
Query: 196 DQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+ V S + D G D P+ + P ++ ELK++L + Y + +R
Sbjct: 203 EGVGSSEDDMDVSGREDPPE------IDPRAEDK--------ELKYQLLKKYSGYLSSLR 248
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+E +K++ GKLP + L WW H KWPYP+
Sbjct: 249 QEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 282
>gi|160420032|dbj|BAF93479.1| class-I knotted1-like homeobox protein IBKN2 [Ipomoea batatas]
Length = 382
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 40/224 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVL---AKYSAVANGRVLD 130
KA+I+ HP Y LL A+V C ++ P P++ A+LS +R L + S + +
Sbjct: 122 KAKIIAHPQYSNLLEAYVDCQKVGAP----PEMAARLSAARQELEGKQRASFIGSRDSSK 177
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGE 184
D ELDQFM Y +L ++++L + + EA+ +E L L+ S +
Sbjct: 178 DPELDQFMEAYYDMLMKYRDELTRPFQ----EAMEFMRRIESQLNMLSDGPVRIFNSDDK 233
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR-HELKHELKQ 243
G S++D+D +T R + RV+ ELK+ L +
Sbjct: 234 CEGVGSSEEDQDNSGGETEL----------------------REIDPRVQDRELKNHLLK 271
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP D L +WW H KWPYP+
Sbjct: 272 KYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPS 315
>gi|300174956|dbj|BAJ10713.1| shoot meristemless ortholog [Weddellina squamulosa]
Length = 356
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 37/222 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LLSA+V+C ++ P + + A A G + D
Sbjct: 103 KAKIMSHPHYTRLLSAYVNCQKVGAPPE---VVARLEEARAAAAAAALGPAGGCIGQDPA 159
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP-----GESTGA 188
LDQFM Y +L ++++L + ++ EA++ +E ++LT SP GE+
Sbjct: 160 LDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVEFQFKALTLSSPCSGYSGEANER 215
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
S ++E D + F D P +R ELK +L + Y
Sbjct: 216 NASSEEEG--DGNNVFID---------------PQAEDR--------ELKGQLLRRYSGY 250
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 251 LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 292
>gi|85543304|gb|ABC71532.1| KNOTTED1-like homeodomain protein [Pharus lappulaceus]
Length = 336
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
Query: 52 NNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQL- 110
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P + ++ A
Sbjct: 66 GGKAKDPSSSSSYAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAPPEVATRLTAVAH 123
Query: 111 ---SRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
+R R L A + ELDQFM Y +L ++E+L + ++ AME +
Sbjct: 124 ELEARQRTALGGLGAAM------EPELDQFMEAYHEMLVKYREELARPLQ-EAMEFLRKV 176
Query: 168 WDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESER 227
+L+ + S++G S + S++D++ +T + G D
Sbjct: 177 -ELQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVD-------------- 221
Query: 228 SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH+L + Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 222 -------QELKHQLLKKYSGYLSTLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPS 274
Query: 288 VSR 290
S+
Sbjct: 275 ESQ 277
>gi|449447321|ref|XP_004141417.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 335
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 35/227 (15%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVA 124
D+E +K K I+ HP Y LL A++ C ++ P P++ +L +R + S++
Sbjct: 62 DFEAIKAK--ILAHPQYSSLLEAYMECQKVGAP----PQVVERLVAARQEFEARQRSSMV 115
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----V 180
+G + D ELDQFM Y +L ++E+L + ++ EA+ +E L SL +
Sbjct: 116 SGETIKDPELDQFMEAYYDMLVKYREELSRPIQ----EAMDFMRRIESQLTSLCNGPVRI 171
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
+ M +E+Q +S G + P+ + P +R ELK+
Sbjct: 172 FNSDDKCDGMGSSEEEQENSG-----GETELPE------IDPRAEDR--------ELKNH 212
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 213 LLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 259
>gi|145346212|ref|XP_001417587.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577814|gb|ABO95880.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 244
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS-------AVANGRVL 129
+ HP+Y +L+ A+ C +I D L +D R RD + YS A ++G
Sbjct: 12 VRAHPMYPRLVEAYYECRQIGAEGDVLEALD----RERDAML-YSVQVMNEDASSSGGAH 66
Query: 130 D--DKELDQFMTHYVLLLYSFKEQLQQHVRVHAM--EAVMACWDLEQSLQSLTG--VSPG 183
D ++LD+FM L S+ ++L HA+ +A C +LE + + V
Sbjct: 67 DVPQRDLDRFMRECTHELESYVKEL------HALYEDAKSCCRELETRARKVRSDVVKSA 120
Query: 184 ESTG-ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ G A S ++ G D L ++ R ER L+ LK
Sbjct: 121 DIRGEAAESKRRAPATAAEHAAASGDFDQI-------LSNSQQRRDHEER----LREALK 169
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNS 302
+ Y I+ ++ E +RKR+ GKLP +T +LK WW + WPYPT IA + ++
Sbjct: 170 RKYASSIMTLKSEFMRKRKKGKLPDQSTEVLKNWWSENIVWPYPTEDDKRELIAQTKLDA 229
Query: 303 ICTLNSYL 310
N ++
Sbjct: 230 TQVNNWFI 237
>gi|449526764|ref|XP_004170383.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 369
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 35/227 (15%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVA 124
D+E +K K I+ HP Y LL A++ C ++ P P++ +L +R + S++
Sbjct: 105 DFEAIKAK--ILAHPQYSSLLEAYMECQKVGAP----PQVVERLVAARQEFEARQRSSMV 158
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----V 180
+G + D ELDQFM Y +L ++E+L + ++ EA+ +E L SL +
Sbjct: 159 SGETIKDPELDQFMEAYYDMLVKYREELSRPIQ----EAMDFMRRIESQLTSLCNGPVRI 214
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
+ M +E+Q +S G + P+ + P +R ELK+
Sbjct: 215 FNSDDKCDGMGSSEEEQENSG-----GETELPE------IDPRAEDR--------ELKNH 255
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 256 LLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 302
>gi|33333531|gb|AAQ11882.1| knotted 1 [Hordeum vulgare]
Length = 349
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 63 GRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA 122
G E K +I+ HP Y LL A++ C ++ P D L ++ A + AK A
Sbjct: 78 GEISQAEAEAIKTKIMAHPQYTALLVAYLDCQKVGAPPDVLERLTA-------MAAKLDA 130
Query: 123 VANGRVLD--DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG- 179
GR+ + D ELDQFM Y +L ++E+L + + EA+ +E L S+TG
Sbjct: 131 HTPGRLHEARDPELDQFMEAYCNMLAKYREELTRPIE----EAMEFLKRVEAQLDSITGG 186
Query: 180 --------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
++ G+ G S+DD D + P E + +
Sbjct: 187 GHGSAPLSLAAGKYEGVGSSEDDMDASGRENE------------------PPEIDPRAED 228
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +LK++L + Y + +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 229 K---DLKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 281
>gi|66865821|gb|AAY57559.1| knotted 1 [Zea mays]
Length = 211
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAV 123
A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+ +++V A+
Sbjct: 1 AGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTA 54
Query: 124 ANG-RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
G + ELDQFM Y +L F+E+L + ++ AME + SL S++G S
Sbjct: 55 LGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQLNSL-SISGRSL 112
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ S++D++ +T + G D ELKH L
Sbjct: 113 RNILSSGSSEEDQEGSGGETELPEVDAHGVD---------------------QELKHHLL 151
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 152 KKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 196
>gi|15236418|ref|NP_192555.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
gi|1170676|sp|P46639.1|KNAT1_ARATH RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=Protein BREVIPEDICELLUS; AltName: Full=Protein
KNAT1
gi|4689449|gb|AAD27897.1|AC006267_2 KNAT1 homeobox-like protein [Arabidopsis thaliana]
gi|606950|gb|AAA67881.1| knotted-like homeobox protein [Arabidopsis thaliana]
gi|7267455|emb|CAB81151.1| KNAT1 homeobox-like protein [Arabidopsis thaliana]
gi|19424027|gb|AAL87309.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
gi|21280867|gb|AAM45030.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
gi|332657197|gb|AEE82597.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
Length = 398
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 191
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C QS + G
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLC----QSPIHILNNPDG 246
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S SD++++ N G + P+ + P +R ELK+ L +
Sbjct: 247 KSDNMGSSDEEQE------NNSGGETELPE------IDPRAEDR--------ELKNHLLK 286
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 287 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 332
>gi|75138249|sp|Q75LX7.1|KNOS4_ORYSJ RecName: Full=Homeobox protein knotted-1-like 4; AltName:
Full=Homeobox protein OSH10
gi|40538935|gb|AAR87192.1| putative KNOTTED-1-like homeobox protein [Oryza sativa Japonica
Group]
gi|222625532|gb|EEE59664.1| hypothetical protein OsJ_12066 [Oryza sativa Japonica Group]
Length = 337
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
ET KA+I+ HPLY LL A + C ++ P P++ +LS + + + A R
Sbjct: 58 ETDAIKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSA---LAGELDSRAEDRY 110
Query: 129 L----DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
L D ELD+FM Y+ +L S++++L + ++ EA ++E + S T +
Sbjct: 111 LQGQSSDPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFT-LDDNG 165
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+D+++ D S G + +E ELK L
Sbjct: 166 SEGGNSSEDEQEAGGGDMA----------SAGLPEITSPCAED-------KELKSHLLNK 208
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + + E+ +K++ GKLP D L WW H +WPYP+
Sbjct: 209 YSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPS 251
>gi|351723761|ref|NP_001238058.1| homeobox protein SBH1 [Glycine max]
gi|1170312|sp|P46608.1|HSBH1_SOYBN RecName: Full=Homeobox protein SBH1
gi|485406|gb|AAA20882.1| SBH1 [Glycine max]
Length = 379
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 30/219 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + +++ + + + +A + + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GESTGATMS 191
LDQFM Y +L ++++L + ++ EA++ +E ++LT S + G +
Sbjct: 185 LDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDFASNEGGDRN 240
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
E+ VD N D P +R +LK +L + Y +
Sbjct: 241 GSSEEDVDLH-NMID---------------PQAEDR--------DLKGQLLRKYSGYLGS 276
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 277 LKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQ 315
>gi|308803302|ref|XP_003078964.1| knotted class 1 homeodomain protein liguleless3 (ISS) [Ostreococcus
tauri]
gi|116057417|emb|CAL51844.1| knotted class 1 homeodomain protein liguleless3 (ISS) [Ostreococcus
tauri]
Length = 345
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ---LSRSRDVLAKYSAVANGRVLD--D 131
I HP+Y +L+ A+ C +I D ++ + + S V+++ + ++ LD
Sbjct: 73 IRAHPMYARLVEAYYECRKIGAHGDAAVALEREKDAMLYSVQVMSEEAYESSAMALDVAS 132
Query: 132 KELDQFM---TH----YVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
+LD+FM TH YV L+S E ++ + A D+ S G +
Sbjct: 133 CDLDEFMRDCTHELETYVKELHSLYEDAKRCCKSLENRAHKVKTDVVHVDSSRRGEAAES 192
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
A ++D+ + V D F ++ +E +R E L+ +LK+
Sbjct: 193 KRHAPATEDELEAVSDD---------------FDQILASEHQRRNHE---ERLRQDLKRK 234
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y I ++ E +RKR+ GKLP +T +LK WW + WPYP+
Sbjct: 235 YASSITMLKTEFMRKRKKGKLPDTSTDILKKWWSDNIVWPYPS 277
>gi|255568864|ref|XP_002525403.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223535366|gb|EEF37041.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 337
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 63 GRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA 122
G ED + KA+I HP Y +LL A++ C ++ P + +D ++ R D+
Sbjct: 86 GLDEDSMSTLIKAKIASHPSYPRLLHAYIDCQKVGAPPEIAGLLD-EIRRENDMYKGDGG 144
Query: 123 VANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
A+ V D ELD+FM Y +L +K L++ EA +E L++L
Sbjct: 145 AASTCVGADPELDEFMETYCDVLLKYKSDLEKPFD----EATTFLNKIEMQLRNLC---- 196
Query: 183 GESTGATMSD-DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
TGA++S DE SD G L+ ++ P+ +R L +R L
Sbjct: 197 ---TGASVSTLSDEGAPSSDEELSGGELEAQEAQ------PSSKDRDLKDR--------L 239
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 240 FRRFGSHISTLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPT 285
>gi|302398825|gb|ADL36707.1| HD domain class transcription factor [Malus x domestica]
Length = 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y L+ A++ C R P D +P++ ++R +
Sbjct: 120 NDDHSLSSNEVEAIKAKIIAHPQYSNLVEAYMDCQRGGAPSDVVPRLS--VARQEFEARQ 177
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 178 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 233
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +++Q +S G + P+ + P +R
Sbjct: 234 NNNAPPLRIFSPSEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--- 279
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+ S
Sbjct: 280 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSES 333
>gi|300676313|gb|ADK26526.1| KNOTTED1-like protein [Petunia x hybrida]
Length = 357
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 57/267 (21%)
Query: 33 HHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVS 92
HH HQ +N ++ + N +G E V KA+I+ HP LL A++
Sbjct: 72 HHQHQT------------VHNHHHESENSSG-----EVVGLKAKILAHPQCSSLLDAYMD 114
Query: 93 CLRIATPVDQLPKIDAQLS--RSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKE 150
C ++ P P++ A+LS R + + +++ V D ELDQFM Y +L ++E
Sbjct: 115 CQKVGAP----PEVMARLSTLRQEFEMRQRASLTGKDVAKDPELDQFMEAYYDMLVKYRE 170
Query: 151 QLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--------GESTGATMSDDDEDQVDSDT 202
+L + ++ EA+ +E L L G P + G S++D+D +T
Sbjct: 171 ELTRPLQ----EAMDFMRTIETQLNML-GNGPVRAFNSEDNKCEGVGSSEEDQDNSGGET 225
Query: 203 NFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRA 262
P+ + P +R ELK+ L + Y + +++E+ +K++
Sbjct: 226 EL-------PE------IDPRAEDR--------ELKNHLLKKYSGYLSSLKQELSKKKKK 264
Query: 263 GKLPGDTTSLLKAWWLSHAKWPYPTVS 289
GKLP D L +WW H KWPYP+ S
Sbjct: 265 GKLPKDARQKLLSWWELHYKWPYPSES 291
>gi|380746851|gb|AFE48356.1| liguleless-like homeodomain protein [Cuscuta pentagona]
Length = 350
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 40/233 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HPLY L+SA++ C ++A P Q+ + ++S+ A +A A+ + D E
Sbjct: 90 KAQIANHPLYPNLVSAYIQCTKVAAP-PQISTLLEEISQHPPAAATTTATAD-EIAGDPE 147
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT--------------G 179
LDQFM Y +Y +KE+L + EA +E L SL
Sbjct: 148 LDQFMESYCEAMYKYKEELSKPFD----EAKAFLSSIESQLSSLCKDSSSQTSFNSSFHS 203
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKH 239
G G T +++E + D DG D ER ++K
Sbjct: 204 CDEGGGGGDTSEEEEEYASHGEVEVGD---DGDD-----------------ERQWAQIKE 243
Query: 240 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
L + Y + ++R++ L+KR+ GKLP D +L WW SH +WPYPT N
Sbjct: 244 MLMRKYSGYLSNLRKDFLKKRKKGKLPKDARLVLLQWWDSHYRWPYPTEEEKN 296
>gi|55669503|gb|AAV54619.1| homeobox transcription factor KN2 [Pinus taeda]
Length = 429
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 37/223 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I+ HP Y LL A++ C +I P + ++DA LS + S+++ G D E
Sbjct: 169 KSKILAHPQYPNLLGAYIDCQKIGAPPEVASRLDA-LSHEYENQQHRSSLSIGM---DPE 224
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL----TGVSPG-----E 184
LDQFM Y +L + E+L + + EA+ +E L SL +SP +
Sbjct: 225 LDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLNSLGKGTIRISPSAENDEK 280
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
+ G S++ ED +T+F E + +E ELK L +
Sbjct: 281 TEGGASSEEVEDGSGGETDF------------------QEVDHHAVED--RELKDHLLRK 320
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 321 YSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPS 363
>gi|218193477|gb|EEC75904.1| hypothetical protein OsI_12972 [Oryza sativa Indica Group]
Length = 337
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 33/223 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQL-SRSRDVLAKYSAVA 124
ET KA+I+ HPLY LL A + C ++ P V +L + +L SR+ D+ + +
Sbjct: 58 ETDAIKAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDMHLQGQS-- 115
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
D ELD+FM Y+ +L S++++L + ++ EA ++E + S T +
Sbjct: 116 -----SDPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFT-LDDNG 165
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+D+++ D S G + +E ELK L
Sbjct: 166 SEGGNSSEDEQEAGGGDMA----------SAGLPEITSPCAEDK-------ELKSHLLNK 208
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + + E+ +K++ GKLP D L WW H +WPYP+
Sbjct: 209 YSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPS 251
>gi|195638046|gb|ACG38491.1| homeobox protein rough sheath 1 [Zea mays]
Length = 363
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV----LAKY 120
A D + KA I+ HP Y LL+A+++C ++ P D ++ A + + D +++
Sbjct: 93 AADGDADAIKARIMSHPQYSALLAAYLNCQKVGAPPDVSDRLSAMAAANLDAQPGPISRR 152
Query: 121 SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV 180
R DD ELDQFM Y +L F E++ + ++ EA +E+ L
Sbjct: 153 RGPTTTRA-DDPELDQFMEAYCNMLVKFHEEMARPIQ----EATEFFNSMERQL------ 201
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
G+T+SD + + S + D S P E + ++ ELKH+
Sbjct: 202 ------GSTISDSNCEVAGSSEDEQDAS------------CPEEIDPCAEDK---ELKHQ 240
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +R+E ++++ GKLP + L WW H KWPYP+
Sbjct: 241 LLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>gi|85543292|gb|ABC71526.1| KNOTTED1 homeodomain protein [Panicum miliaceum]
Length = 334
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ L A G +
Sbjct: 96 IKAKIISHPHYHSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAAT 151
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELDQFM Y +L F+E+L + ++ AME M + + S S++G S +
Sbjct: 152 EPELDQFMEAYHEMLVKFREELTRPLQ-EAME-FMRRVESQLSSLSISGRSLRNILSSGS 209
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S++D++ +T + G D ELKH L + Y +
Sbjct: 210 SEEDQEGSGGETELPEVDAHGVD---------------------QELKHHLLKMYSGYLS 248
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 249 SLKQELSKKKKKGKLPKEARQQLLGWWDLHYKWPYPS 285
>gi|19908859|gb|AAM03026.1|AF482994_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
Length = 400
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 137 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 193
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C QS + G
Sbjct: 194 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLC----QSPIHILNNPDG 248
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S SD++++ N G + P+ + P +R ELK+ L +
Sbjct: 249 KSDNMGSSDEEQE------NNSGGETELPE------IDPRAEDR--------ELKNHLLK 288
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 289 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 334
>gi|55669501|gb|AAV54618.1| homeobox transcription factor KN1 [Pinus taeda]
Length = 434
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 30/226 (13%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D E K++I+ HP Y LL A++ C +I P + + ++DA +D + ++
Sbjct: 168 DNEEHAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREHQDPQRRTVSIGM- 226
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ELDQFM Y +L + E+L + + EA++ +E SL G+ T
Sbjct: 227 ----DPELDQFMEAYCEILTKYHEELAKPFK----EAMLFLKKIETQFNSL-----GKGT 273
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH-----ELKHEL 241
S D+D+ + DG + E E H ELK+ L
Sbjct: 274 IRISSPADDDEKTEGGGSSEEVEDG-----------SGGETDFQEVDHHAVEDRELKNHL 322
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 323 LRKYCGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWSLHDKWPYPS 368
>gi|255542896|ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223548472|gb|EEF49963.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 327
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y L+SA++ C ++ P ++ + ++ R + S G + D E
Sbjct: 69 KTQIAHHPRYPDLVSAYIECQKVGAP-PEMTSLLEEIGRENYSIKGCS----GEMGADPE 123
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L+ +KE+L + EA D+E L +L G T
Sbjct: 124 LDEFMESYCEVLHRYKEELSKPFD----EATTFFSDIESQLSNLC---KGTLTKTFHYGS 176
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMER-VRHELKHELKQGYKEKIVDI 252
DE S+ + + G + +ES S R V +LK L + Y + ++
Sbjct: 177 DEAVGTSE-----------EEISCGEIEASESRESCGSRPVDPDLKGMLLRKYSGYLSNL 225
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R+E L+KR+ GKLP D +L WW +H +WPYPT
Sbjct: 226 RKEFLKKRKKGKLPKDARMILLDWWNNHYRWPYPT 260
>gi|224118100|ref|XP_002331558.1| predicted protein [Populus trichocarpa]
gi|222873782|gb|EEF10913.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 37/233 (15%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND G + + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A
Sbjct: 108 NDGGSS----STSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAAS 159
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
+ +D LDQFM Y +L ++++L + ++ EA++ +E ++LT
Sbjct: 160 MGPANTDGIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVECQFRALTL 215
Query: 180 VSPGES--TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHEL 237
SP + G + E+++D + F D P ++ EL
Sbjct: 216 SSPNSAWGEGNDRNASSEEELDVNNKFID---------------PQAEDQ--------EL 252
Query: 238 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
K +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 253 KGQLLRKYSGYLGSLKKEFMKKRKKGKLPKEARQQLLDWWSRHHKWPYPSESQ 305
>gi|85543300|gb|ABC71530.1| KNOTTED1 homeodomain protein [Lithachne humilis]
Length = 350
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSA 122
A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + ++
Sbjct: 95 AADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEVAARLTALAQDLELRQRTS 148
Query: 123 VANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
++ + ELDQFM Y +L ++E+L + ++ EA+ +E L SL+
Sbjct: 149 LSGLGAATEPELDQFMEAYHEMLMKYREELTRPLQ----EAMEFLRRVESQLNSLSISGR 204
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ +EDQ S G + P+ G V ELKH+L
Sbjct: 205 PLRNILSSGSSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHQLL 245
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 246 RKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWDMHYKWPYPS 290
>gi|19908861|gb|AAM03027.1|AF482995_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
Length = 400
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 137 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 193
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C QS + G
Sbjct: 194 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLC----QSPIHILNNPDG 248
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S SD++++ N G + P+ + P +R ELK+ L +
Sbjct: 249 KSDNMGSSDEEQE------NNSGGETELPE------IDPRAEDR--------ELKNHLLK 288
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 289 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 334
>gi|2522484|gb|AAB81079.1| knotted class 1 homeodomain protein [Hordeum vulgare subsp.
vulgare]
Length = 364
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 118/246 (47%), Gaps = 34/246 (13%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP + LL+A++ C ++ P P++
Sbjct: 87 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHHSSLLAAYLDCQKVGAP----PEV 137
Query: 107 DAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 138 SARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAM 193
Query: 165 MACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTE 224
+E L SL+ + +EDQ S G + P+ G
Sbjct: 194 EFLRRVETQLNSLSISVRSLRNILSTGSSEEDQEGSG-----GETELPEIDAHG------ 242
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
V ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWP
Sbjct: 243 --------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWP 294
Query: 285 YPTVSR 290
YP+ S+
Sbjct: 295 YPSESQ 300
>gi|85543294|gb|ABC71527.1| KNOTTED1 homeodomain protein [Cenchrus americanus]
Length = 321
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 31/236 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS 113
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 83 KAKEPSSSSPYAGDVEAIKAK--IIFHPHYYSLLAAYLECQKVGAP----PEVSARLTAM 136
Query: 114 RDVLAKYSAVANGRV--LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
L A G + + ELDQFM Y +L F+E+ + ++ AME +
Sbjct: 137 AQELEARQRTALGGLGAATEPELDQFMEAYHEMLVKFREEPTRPLQ-EAMEFMRRVESQL 195
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 196 NSL-SISGRSLRNILSSGSSEEDQEGSGGETEIPEIDAHGVD------------------ 236
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L WW +H KWPYP+
Sbjct: 237 ---QELKHHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQQLLGWWEAHYKWPYPS 289
>gi|132424653|gb|ABO33479.1| class I KNOX homeobox transcription factor [Medicago truncatula]
Length = 288
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 33/227 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP Y LL A++ C +I P P++ A+L SR + S+V +
Sbjct: 24 EAEAIKAKIIAHPQYSSLLQAYMDCQKIGAP----PEVVARLVASRQEFEARQRSSVNSR 79
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----VSP 182
D ELDQFM Y +L ++E+L + ++ EA+ +E L +L + P
Sbjct: 80 ETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNTLCNGPLRIFP 135
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ S + EDQ +S G ++ + P +R ELK+ L
Sbjct: 136 DDKNEGVGSSE-EDQENS----------GGETDQLPEIDPRAEDR--------ELKNHLL 176
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 177 KKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSES 223
>gi|242042882|ref|XP_002459312.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
gi|241922689|gb|EER95833.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
Length = 356
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR- 127
E KA+IV HP Y LL+A++ C ++ P D L ++ A + AK A GR
Sbjct: 90 EAEAIKAKIVAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDARPPGRH 142
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHV--RVHAMEAVMACWDLEQSLQ-----SLTGV 180
D ELDQFM Y +L ++E+L + + + ++ V A D + +
Sbjct: 143 EPRDPELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDSISGGGGSSSSARLSL 202
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
+ G+S G S+DD D + D P+ + P ++ ELK++
Sbjct: 203 TDGKSEGVGSSEDDMDPSGREN-------DPPE------IDPRAEDK--------ELKYQ 241
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 242 LLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 288
>gi|108885278|sp|P46609.2|KNOS6_ORYSJ RecName: Full=Homeobox protein knotted-1-like 6; AltName:
Full=Homeobox protein OSH1; AltName: Full=Homeobox
protein knotted-1-like 1; Short=Oskn1
gi|478420|pir||JQ2379 homeobox 1 protein OSH1 - rice
gi|41469276|gb|AAS07158.1| homeobox 1 protein OSH1 [Oryza sativa Japonica Group]
gi|108710856|gb|ABF98651.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
gi|108710857|gb|ABF98652.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
gi|284431774|gb|ADB84628.1| homeobox protein [Oryza sativa Japonica Group]
Length = 361
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSAVANGRVLD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + +A+
Sbjct: 104 IKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLELRQRTALGVLGAAT 159
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELDQFM Y +L ++E+L + ++ AME + + + + S++G S +
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLRRV-ETQLNTLSISGRSLRNILSSGS 217
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S++D++ +T + G D ELKH L + Y +
Sbjct: 218 SEEDQEGSGGETELPEIDAHGVD---------------------QELKHHLLKKYSGYLS 256
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E+ +K++ GKLP D L WW H KWPYP+ S+
Sbjct: 257 SLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQ 296
>gi|371767734|gb|AEX56222.1| knotted-like 1 protein [Dactylorhiza fuchsii]
Length = 298
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
+ET KA+I+ HP Y +LL +++ ++ P + + +++ + S A + G
Sbjct: 39 YETTLLKAKIMSHPQYPRLLPTYINLHKVGAPPEVVARLEEACASSLISCGPGGAASGG- 97
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGEST 186
+D LDQFM Y +L ++++L + + EA++ ++ +SL+ P
Sbjct: 98 --EDPALDQFMEAYCEMLAKYEQELSKPFK----EAMLFLSRIDAQFKSLSLSFPPAPQV 151
Query: 187 GATMSDD--DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
A + ED +D N+ D P +R ELK +L +
Sbjct: 152 CADFEKNGSSEDDIDLRDNYVD---------------PEAGDR--------ELKGQLLRK 188
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
Y + +++E L+KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 189 YSGYLGSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 234
>gi|350535485|ref|NP_001233941.1| homeobox protein knotted-1-like LET6 [Solanum lycopersicum]
gi|6016221|sp|O22299.1|LET6_SOLLC RecName: Full=Homeobox protein knotted-1-like LET6
gi|2529701|gb|AAC49917.1| class I knotted-like homeodomain protein [Solanum lycopersicum]
Length = 355
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 34/219 (15%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+++C +I P + + +++ + S + S+ G + +D LDQF
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQF 160
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD----- 192
M Y +L ++++L + + EA++ +E ++LT ++P S + + +
Sbjct: 161 MEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMDRN 215
Query: 193 -DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+++VD + +F D P +R ELK +L + Y +
Sbjct: 216 GSSDEEVDVNNSFID---------------PQAEDR--------ELKGQLLRKYSGYLGS 252
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WWL H KWPYP+ S+
Sbjct: 253 LKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQ 291
>gi|383212083|dbj|BAM08928.1| class I knotted1-like homeobox protein [Asparagus asparagoides]
Length = 341
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVAN 125
D ET+K K IV HP Y LL A++ C ++ P P++ A+LS +R++ A+ A A
Sbjct: 72 DDETIKAK--IVSHPQYSALLGAYMDCQKVGAP----PELAARLSVIAREIEAQQQAAAA 125
Query: 126 GRVLD----DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
D D ELDQFM Y +L ++E+L + ++ EA+ +E L S+T
Sbjct: 126 SCRRDASSTDPELDQFMEAYCNMLVKYREELTRPLQ----EAMDFLRRVESQLNSIT--- 178
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
GAT S D+ + DG P + +E ELKH L
Sbjct: 179 ----NGATASIFSTDEKCEGVGSSEEDQDGSGGEAEHPEIDPRAEDK-------ELKHHL 227
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +R E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 228 LKKYSGYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 273
>gi|307335622|gb|ADN43388.1| KNOX1 [Agave tequilana]
Length = 357
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 38/225 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGR----V 128
KA+I+ HP Y LL A++ C ++ P++ A+LS +R++ A+ A + R
Sbjct: 90 KAKIISHPHYSALLGAYMDCQKVGAS----PEVAARLSAVAREIEARQQASMSCRRDASS 145
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG------VSP 182
+D ELDQFM Y +L ++E+L + ++ EA+ +E L SLT S
Sbjct: 146 AEDPELDQFMEAYCNMLVKYREELTRPLQ----EAMNFFRGVESQLNSLTNGATASIFSA 201
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ + +EDQ DS G + P+ + P ++ ELK L
Sbjct: 202 ADEKCEGVGFSEEDQDDSG-----GEAEHPE------IDPRAEDK--------ELKRHLL 242
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +R E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 243 KKYSRYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 287
>gi|371767708|gb|AEX56209.1| knotted-like 4 protein [Dactylorhiza fuchsii]
Length = 279
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 71 VKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD 130
V KA I HP Y LL A++ C ++ P D +D R K A N +
Sbjct: 38 VDMKARIASHPRYPHLLEAYIDCQKVGAPPDIASVLDE--IRREKAADKRGAAPNLILGA 95
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELD+FM Y +L ++ L Q EA +E L L A +
Sbjct: 96 DPELDEFMEMYCDVLVKYRRDLAQPFD----EATAFLNTIEIQLSDLC------KPAAFI 145
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD E S+ G ++ P+ L + ER +LK +L + Y +
Sbjct: 146 SD--EAVGSSEEELSGGEVEVPE------LHSKDEER--------DLKEKLLRKYSGYLS 189
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E +K+R GKLP + LL WW +H KWPYPT
Sbjct: 190 SLKKEFSKKKRKGKLPREARQLLLDWWTAHYKWPYPT 226
>gi|340764130|gb|AEK69289.1| HIRZINA-like protein [Linaria vulgaris]
Length = 367
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 77/301 (25%)
Query: 16 TTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASND-------------- 61
TTS PP P HHHHQ++ P NNK+ +
Sbjct: 49 TTSFLPPIPF-----TNHHHHQSD----------PINNKSPMITYQEENHHNNNNTITST 93
Query: 62 -----NGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--AQLSRSR 114
N A+D KA+I+ HP Y +LL+A+V+C +I P + + +++ A + RS
Sbjct: 94 GYYFMNSNADD---CSLKAKIMSHPHYHRLLAAYVNCQKIGAPDEVVERLEEAAAMCRSH 150
Query: 115 DVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSL 174
+ V +D LDQFM Y +L ++++L + ++ EA++ +E
Sbjct: 151 GLQGSIC------VGEDPSLDQFMEAYSEMLTKYEQELSKPLK----EAMLFFSRIESQF 200
Query: 175 QSLTGVSPGESTGA-----TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSL 229
+++ P + A + E+++D + + D +
Sbjct: 201 KAIALSHPSPAATARGEALYRNGSSEEEIDVNNSMIDPQAEDV----------------- 243
Query: 230 MERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 244 ------ELKGQLFRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 297
Query: 290 R 290
+
Sbjct: 298 Q 298
>gi|356577702|ref|XP_003556963.1| PREDICTED: homeobox protein knotted-1-like 2-like, partial [Glycine
max]
Length = 323
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 36/228 (15%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP Y LL A++ C +I P++ A++ ++ + S+V +
Sbjct: 60 EVEAIKAKIIAHPQYSNLLEAYMDCQKIGA----TPEVVARMVAAKQEFEARQRSSVGSR 115
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-----VS 181
D ELDQFM Y +L ++E+L + ++ EA+ +E L L +S
Sbjct: 116 ETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLCNGPVRILS 171
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
+ GA S++D+D +T + + P +R ELK+ L
Sbjct: 172 DDKCEGAGSSEEDQDNSGGETELPE-------------IDPRAEDR--------ELKNHL 210
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ Y + +++E+ +K++ GKLP D L WW H KWPYP+ S
Sbjct: 211 LRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSES 258
>gi|60476416|gb|AAX21347.1| homeobox knotted-1-like protein KNOX3 [Lotus japonicus]
Length = 227
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+IV HP Y +LL A++ C ++ P ++ ++ ++ R D+ + V + R D E
Sbjct: 2 KAKIVSHPQYPRLLQAYIECQKVGAP-PEIARLLEEIRRENDLCKR--DVVSTRFGADPE 58
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM-SD 192
LD+FM Y +L +K L + EA +E L +L TGA++ +
Sbjct: 59 LDEFMESYCDMLVKYKSDLARPFD----EASNFLNKIEMQLSNLC-------TGASVPTL 107
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
DE V SD F G D D G + E ELK L + + I +
Sbjct: 108 SDEGGVSSDEEFSTGDGDAQD----GQQLRGED---------RELKDRLLRKFGSHIGTL 154
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ E +K++ GKLP + L WW H KWPYPT S
Sbjct: 155 KLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTES 191
>gi|356497567|ref|XP_003517631.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 309
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I HP Y +LL A++ C ++ P ++ ++ ++ R D L K V++
Sbjct: 65 TTVMKAKIASHPQYSRLLQAYIDCQKVGAPP-EIARLLEEIRREND-LCKSDVVSSSTCF 122
Query: 130 D-DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGESTG 187
D ELD+FM Y +L +K L + EA +E L L TG S +
Sbjct: 123 GADPELDEFMETYCDMLVKYKSDLARPFE----EATTFLNKIEMQLSHLCTGASVSNVSD 178
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
DED D + DG L G D ELK L + +
Sbjct: 179 DGGVSSDEDLSTGDGDAQDGQLKGED---------------------RELKDRLLRKFGS 217
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 218 HIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPT 257
>gi|20977646|gb|AAM28232.1| knotted-1-like protein 2 [Helianthus annuus]
Length = 358
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 41/231 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR-DVLAKYSAVANGRV-LDD 131
KA+I+ HP Y LL A++ C ++ P P++ +L+ R + A+ A R D
Sbjct: 86 KAKIISHPHYSNLLQAYMDCQKVGAP----PEVVGRLTAVRQEYEARQRANLGCRENYKD 141
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT------------- 178
ELDQFM Y +L +KE+L + ++ EA+ +E L +LT
Sbjct: 142 PELDQFMEAYYDMLIKYKEELTRPIQ----EAMEFMRRIESQLSTLTISSSSSSSPAGRI 197
Query: 179 GVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 238
+SP ES + DE+Q ++ + P +R ELK
Sbjct: 198 FISPDESKCEVIGSSDEEQENTSGG----------ETEVAEIDPRAEDR--------ELK 239
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+ S
Sbjct: 240 NHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSES 290
>gi|285804235|gb|ADC35598.1| class I KNOX homeobox transcription factor KNOPE6 [Prunus persica]
gi|289655984|gb|ADD14040.1| class 1 KNOTTED-like transcription factor KNOPE6 [Prunus persica]
Length = 334
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP + L+ A++ C ++ P++ ++ S ++ S + D E
Sbjct: 75 KTQIANHPRFPDLVDAYLECQKVGAPLEMKSLLEEIGRVSHHPMSTCSEIGA-----DPE 129
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGESTGATMSD 192
LD+FM Y +L +KE+L + EA +++ L+ L G P S +
Sbjct: 130 LDEFMESYCEVLRGYKEELSKPFD----EATNFLTNIQSQLRKLCKGTFPKTSWDC---N 182
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
DE S+ F G ++ +S T + R+ +R ELK L Y + ++
Sbjct: 183 SDEGVGSSEEEFSCGEVEAAESQ------ETAAARAGGDR---ELKDMLLHKYSGYLTNL 233
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R+E L+KR+ GKLP D + L WW +H +WPYPT
Sbjct: 234 RKEFLKKRKKGKLPKDARTALLDWWTTHYRWPYPT 268
>gi|449434394|ref|XP_004134981.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
gi|449518023|ref|XP_004166043.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 340
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 37/223 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR--VLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + S+ NG + +D
Sbjct: 85 KAKIMAHPHYHRLLAAYVNCRKVGAP----PEVVARLEEACASAVTMSSGNNGGGCIGED 140
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS----PGESTG 187
LDQFM Y +L ++++L + R +A++ ++ ++L+ S P
Sbjct: 141 PALDQFMEAYCEMLTKYEQELSKPFR----DAMLFLQRIDSQFKALSISSSHLPPACGEA 196
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
+ E++VD + + D P +R ELK +L + Y
Sbjct: 197 FDRNGSSEEEVDINGHSID---------------PQAEDR--------ELKGQLLRKYSG 233
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 234 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 276
>gi|187606720|emb|CAQ51274.1| putative knotted1-like protein [Helianthus tuberosus]
Length = 361
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 42/228 (18%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS-----------A 122
KA+I+ HP Y +LLSA+++C +I P + + +++ + R+ V A S
Sbjct: 95 KAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLE-EACRASVVAAMSSRSGGAGTSDGGG 153
Query: 123 VANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL---TG 179
N + D LDQFM Y +L ++++L + + EA++ +E +++ T
Sbjct: 154 GMNMIIGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISISTS 209
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKH 239
S G G + E++VD + N D P +R ELK
Sbjct: 210 DSAGGEGGMDKNGSSEEEVDVNNNLID---------------PQAEDR--------ELKG 246
Query: 240 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 247 QLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 294
>gi|357441887|ref|XP_003591221.1| Homeobox transcription factor KN2 [Medicago truncatula]
gi|355480269|gb|AES61472.1| Homeobox transcription factor KN2 [Medicago truncatula]
Length = 268
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HPLY LLSA + C ++ P +L + ++ R + + DD +
Sbjct: 20 KNQIATHPLYPNLLSAFLECQKVGAPT-ELASLLEEIGRESHPNNAFREIG-----DDPD 73
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FM Y +L+ +KE+L + + EA + ++E L L + S+ SD
Sbjct: 74 LDHFMESYCEVLHRYKEELSKPLN----EATLFLCNIESQLNELCKGTQTMSSDYNRSDH 129
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
E S+ G ++ + G L T ELK L + Y + ++R
Sbjct: 130 -EAAGTSEDEMSCGKVEAVEG-GHDELCGTSCPGD------KELKEMLLRKYGGYLSNLR 181
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+E L+KR+ GKLP D L WW H +WPYPT
Sbjct: 182 QEFLKKRKKGKLPKDARKALMDWWNVHYRWPYPT 215
>gi|187606722|emb|CAQ51275.1| putative knotted1-like protein [Helianthus annuus]
Length = 346
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 55/293 (18%)
Query: 12 LVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETV 71
L +P +S T + + HHH +++ +++ NS SN
Sbjct: 27 LCVPQSSVVYNNTTLIFSPQDHHHRHHSNCGTSASAMMVEDHNTNSNSN----------- 75
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR---- 127
KA+I+ HP Y +LLSA+++C +I P + + +++ + RS + A S +
Sbjct: 76 -VKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLE-EACRSSLMAAMSSRSGSDGAGTS 133
Query: 128 ----------VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL 177
V D LDQFM Y +L ++++L + + EA++ +E +++
Sbjct: 134 GGGAGMSSTIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRMESQFKAI 189
Query: 178 TGVSPGESTGATMSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
T + G D + E+++D D N +G +D P +R
Sbjct: 190 TFSNSDSGCGEGGMDRNGSSEEELDVDMN--NGMVD-----------PQAEDR------- 229
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 230 -ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 281
>gi|388517925|gb|AFK47024.1| unknown [Medicago truncatula]
Length = 316
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--RSRDVLAKYSAVANGRVLDD 131
KA+I HP Y +LL A++ C ++ P P+I + L R + + K V + D
Sbjct: 73 KAKIASHPYYPRLLQAYIDCQKVGAP----PEIASLLEEIRRENDMCKRDVVVSTCFGAD 128
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +K L + EA +E L L ++ T S
Sbjct: 129 PELDEFMESYCDMLVKYKSDLTRPFD----EATTFLNKIETQLSHLCTGGAAAASLPTAS 184
Query: 192 DD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
DD DED D + DG G D ELK L + +
Sbjct: 185 DDGGASSDEDLSTGDGDVQDGQSKGED---------------------RELKDRLLRKFG 223
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 224 SHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPT 264
>gi|56236458|gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]
Length = 368
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 37/222 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C ++ P P++ A+L+ +R + S + + D
Sbjct: 109 KAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRDNSKD 164
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGES 185
ELDQFM Y +L ++E+L + ++ EA+ +E L + S +S
Sbjct: 165 PELDQFMEAYCDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHGPLRIFNSDDKS 220
Query: 186 TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
G S+DD+D +T P+ + P +R ELK+ L + Y
Sbjct: 221 EGVGSSEDDQDNSGGETEL-------PE------IDPRAEDR--------ELKNHLLRKY 259
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 260 SGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|345649239|gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. californica]
Length = 355
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y LL A++ C ++ P++ +D R + +K + V+ + DD E
Sbjct: 108 KAKIASHPRYPILLDAYIDCQKVGAPMEIACLLDE--IRQENDTSKRTVVSTTCLGDDPE 165
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FM Y +L +K L + EA ++ L +L + ++ S
Sbjct: 166 LDNFMETYCDILVRYKSDLSRPFN----EATTFLNKIQMQLSNLCNNKSSSNRISSASAA 221
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
+ D++ + D + G + E + L +R E+K +L + Y I ++
Sbjct: 222 NSDEIVGSSE---------DDLSGGEIEVQEVQPRLEDR---EMKDKLLRKYSGYISSLK 269
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+E +K++ GKLP D +L WW H KWPYPT
Sbjct: 270 QEFSKKKKKGKLPKDARQILFDWWNVHNKWPYPT 303
>gi|194695204|gb|ACF81686.1| unknown [Zea mays]
gi|408690268|gb|AFU81594.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414873087|tpg|DAA51644.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 364
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV----LAKY 120
A D + KA I+ HP Y LL+A++ C ++ P D ++ A + + D +++
Sbjct: 94 AVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRR 153
Query: 121 SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV 180
R DD ELDQFM Y +L F E++ + ++ EA +E+ L
Sbjct: 154 RGPTTTRA-DDPELDQFMEAYCNMLVKFHEEMARPIQ----EATEFFNSMERQL------ 202
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
G+T+SD + + S + D S P E + ++ ELKH+
Sbjct: 203 ------GSTISDSNCEVAGSSEDEQDASW------------PEEIDPCAEDK---ELKHQ 241
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +R+E ++++ GKLP + L WW H KWPYP+
Sbjct: 242 LLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 288
>gi|383212085|dbj|BAM08929.1| class I knotted1-like homeobox protein [Asparagus officinalis]
Length = 343
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVAN 125
D ET+K K IV HP Y LL A++ C ++ P P++ A+LS +R++ A+ A A
Sbjct: 74 DDETIKAK--IVSHPQYSTLLGAYMDCQKVGAP----PELAARLSVIAREIEAQQQAAAA 127
Query: 126 GRVLD----DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
D D ELDQFM Y +L ++E+L + ++ EA+ +E L S+T
Sbjct: 128 SCRRDASSADPELDQFMEAYCNMLVKYREELTRPLQ----EAMDFLRRVESQLNSITN-- 181
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
GAT S D+ + DG P + +E ELKH L
Sbjct: 182 -----GATASIFSTDEKCEGVASSEEDQDGSGGEAEHPEIDPRAEDK-------ELKHHL 229
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +R E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 230 LKKYSGYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 275
>gi|357485791|ref|XP_003613183.1| Knotted-1 homeobox protein [Medicago truncatula]
gi|355514518|gb|AES96141.1| Knotted-1 homeobox protein [Medicago truncatula]
Length = 316
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 91/216 (42%), Gaps = 26/216 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--RSRDVLAKYSAVANGRVLDD 131
KA+I HP Y +LL A++ C ++ P P+I + L R + + K V + D
Sbjct: 73 KAKIASHPYYPRLLQAYIDCQKVGAP----PEIASLLEEIRRENDMCKRDVVVSTCFGAD 128
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +K L + EA +E L L ++ T S
Sbjct: 129 PELDEFMESYCDMLVKYKSDLTRPFD----EATTFLNKIETQLSHLCTGGAAAASLPTAS 184
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
DD D D + DG + S G ELK L + + I
Sbjct: 185 DDGGASSDEDLSTGDGDVQDGQSRG----------------EDRELKDRLLRKFGSHIGT 228
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 229 LKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPT 264
>gi|242042433|ref|XP_002468611.1| hypothetical protein SORBIDRAFT_01g048970 [Sorghum bicolor]
gi|241922465|gb|EER95609.1| hypothetical protein SORBIDRAFT_01g048970 [Sorghum bicolor]
Length = 145
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL---- 129
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+ A+ R
Sbjct: 64 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYA--AHHRPFLSPH 121
Query: 130 DDKELDQFMT 139
D +LD F+
Sbjct: 122 DKHDLDSFLV 131
>gi|429326570|gb|AFZ78625.1| knotted-like protein [Populus tomentosa]
Length = 368
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 37/223 (16%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLD 130
KA+I+ HP Y LL A++ C ++ P P++ A+L+ +R + S + +
Sbjct: 108 IKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRDNSK 163
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGE 184
D ELDQFM Y +L ++E+L + ++ EA+ +E L + S +
Sbjct: 164 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHGPLRIFNSDDK 219
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+DD+D +T P+ + P +R ELK+ L +
Sbjct: 220 SEGVGSSEDDQDNSGGETEL-------PE------IDPRAEDR--------ELKNHLLRK 258
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 259 YSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|4099826|gb|AAD00691.1| homeobox transcription factor SKN1 [Picea mariana]
Length = 433
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D E K++I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 167 DNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM- 225
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL----TGVSP 182
D ELDQFM Y +L + E+L + + EA+ +E SL +SP
Sbjct: 226 ----DPELDQFMEAYCEILTKYHEELAKPFK----EAMTFLMKIEAQFNSLGKGTIRISP 277
Query: 183 G-----ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHEL 237
++ G S++ ED +T+F E + +E EL
Sbjct: 278 PAENDEKTEGGGSSEEVEDGSGGETDF------------------QEVDHHAVED--REL 317
Query: 238 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
K L + Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 318 KDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWSLHDKWPYPS 367
>gi|160420034|dbj|BAF93480.1| class-I knotted1-like homeobox protein IBKN3 [Ipomoea batatas]
Length = 266
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLD 130
KA+I+ HP Y LL A++ C ++ P P++ A+L+ R + +A GR +
Sbjct: 4 IKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAVRQEFEARQRAAGLGGRDIS 59
Query: 131 --DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SP 182
D ELDQFM Y +L ++E+L + ++ EA+ +E L L+ S
Sbjct: 60 SKDPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMRRIESQLNMLSNAPVRVFTSD 115
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ G S+DD+D +T + + P +R ELK+ L
Sbjct: 116 DKCEGVGSSEDDQDNSGGETELPE-------------IDPRAEDR--------ELKNHLL 154
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 155 RKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 199
>gi|297739199|emb|CBI28850.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+V+C ++ P P++ A+L + A V +D LDQF
Sbjct: 1 MAHPHYPRLLAAYVNCQKVGAP----PEVVARLEEACASEEAMGRSATSCVGEDPALDQF 56
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD---DD 194
M Y +L ++++L + + EA++ +E ++LT V+P +S + +
Sbjct: 57 MEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQFKALT-VAPSDSVCGSYAGRVGSS 111
Query: 195 EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIRE 254
E++VD + D P +R ELK +L + Y + +++
Sbjct: 112 EEEVDGNDTCID---------------PQAEDR--------ELKGQLLRKYSGYLGSLKQ 148
Query: 255 EILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 149 EFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 184
>gi|162461591|ref|NP_001105331.1| homeobox protein rough sheath 1 [Zea mays]
gi|3024577|sp|Q41853.1|RSH1_MAIZE RecName: Full=Homeobox protein rough sheath 1
gi|1008879|gb|AAA86287.1| RS1 [Zea mays]
Length = 351
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-VLDDKELDQ 136
V HP Y LL+A++ C ++ P D L ++ A + AK A A GR D ELDQ
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDASAAGRHEPRDPELDQ 147
Query: 137 FMTHYVLLLYSFKEQLQQHV-----RVHAMEAVMAC-WDLEQSLQSLTGVSPGESTGATM 190
FM Y +L ++E+L + + + +EA + C S + ++ G+S G
Sbjct: 148 FMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEGVGS 207
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S+DD D +G + P P + +E ELK++L + Y +
Sbjct: 208 SEDDMDP--------NGRENDP------PEIDPRAEDK-------ELKYQLLKKYSGYLS 246
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 247 SLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 283
>gi|114432128|gb|ABI74672.1| class I KNOX-like 1 protein [Elaeis guineensis]
Length = 352
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 37/236 (15%)
Query: 62 NGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS------RD 115
N ED++ KA+I+ HP Y +LLSA+V+C ++ P + + +++ + S
Sbjct: 77 NAAGEDYDNSVIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEACATSLMMGRASS 136
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
A + G +D LDQFM Y +L ++++L + + EA++ ++ +
Sbjct: 137 SSAAGDGGSGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIDAQFK 192
Query: 176 SLTGVSPG--ESTGATMSDD--DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL+ +P + G + + E++ + N+ D P +R
Sbjct: 193 SLSLSTPPPPQVYGEQLERNGSSEEEFGASENYVD---------------PQAEDR---- 233
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + +++E L+KR+ GKLP + L WW H KWPYP+
Sbjct: 234 ----ELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQLLDWWNRHYKWPYPS 285
>gi|165928771|gb|ABY74432.1| knotted-like homeobox protein [Kalanchoe x houghtonii]
Length = 386
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
+D+ E + KA+I+ HP LL A++ C ++ P P++ AQL +R+ K
Sbjct: 106 DDDQCTESDDAAAIKAKIMSHPQCSNLLEAYMDCQKVGAP----PQVVAQLVAAREEFEK 161
Query: 120 YSAVANGRVLD---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS 176
++ D D ELDQFM Y +L ++E+L + ++ EA+ +E L +
Sbjct: 162 QQGSSSSSGKDISRDPELDQFMEAYYHMLLKYREELTRPLQ----EAMDFMRRIESQL-N 216
Query: 177 LTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE 236
L G SP + + DE D + + +G ++ + P +R E
Sbjct: 217 LLGASPIRAYNPS----DEKSSDGVGSSEEEGDNGGETDQLPKIDPRAEDR--------E 264
Query: 237 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LK L + Y + +++E+ +KR+ GKLP + L AWW H KWPYP+
Sbjct: 265 LKLHLMKKYSGYLSSLKQELSKKRKKGKLPKEARQKLLAWWELHYKWPYPS 315
>gi|55276122|gb|AAV49802.1| homeobox transcription factor KN3 [Populus trichocarpa x Populus
deltoides]
Length = 368
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 37/223 (16%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLD 130
KA+I+ HP Y L+ A++ C ++ P P++ A+L+ +R + S + +
Sbjct: 108 IKAKIIAHPQYSNLMEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRDNSK 163
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGE 184
D ELDQFM Y +L ++E+L + ++ EA+ +E L + S +
Sbjct: 164 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHGPLRIFNSDDK 219
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+DD+D +T P+ + P +R ELK+ L +
Sbjct: 220 SEGVGSSEDDQDNSGGETEL-------PE------IDPRAEDR--------ELKNHLLRK 258
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 259 YSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|224063413|ref|XP_002301134.1| predicted protein [Populus trichocarpa]
gi|222842860|gb|EEE80407.1| predicted protein [Populus trichocarpa]
gi|225626279|gb|ACN97189.1| KNOX transcription factor [Populus trichocarpa]
Length = 368
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 37/223 (16%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLD 130
KA+I+ HP Y L+ A++ C ++ P P++ A+L+ +R + S + +
Sbjct: 108 IKAKIIAHPQYSNLMEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRDNSK 163
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGE 184
D ELDQFM Y +L ++E+L + ++ EA+ +E L + S +
Sbjct: 164 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHGPLRIFNSDDK 219
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+DD+D +T P+ + P +R ELK+ L +
Sbjct: 220 SEGVGSSEDDQDNSGGETEL-------PE------IDPRAEDR--------ELKNHLLRK 258
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 259 YSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|356535016|ref|XP_003536045.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 2
[Glycine max]
Length = 293
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY L+SA++ C ++ P +L + +++R Y A + DD E
Sbjct: 52 KSQIATHPLYPNLVSAYIECRKVGAP-PELASLLEEIARE-----SYPTDALREIGDDPE 105
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L+ +K++L + EA + +E L +L G T A +SD+
Sbjct: 106 LDEFMESYCEVLHRYKQELSKPFN----EATLFLCSIESQLSNLC---KGTLTIAFLSDE 158
Query: 194 DEDQVDSDTNFFD-GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
+ + ++ +++G +S G P ELK L + Y + +
Sbjct: 159 AAGTSEDELSWEKVEAVEGHESSGPRP-------------GDQELKEMLLRKYGGYLSSL 205
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++E L+KR+ GKLP D +L WW +H +WPYPT
Sbjct: 206 KKEFLKKRKKGKLPKDARMVLMDWWNTHYRWPYPT 240
>gi|7581979|emb|CAB88029.1| knotted1-like homeobox protein [Dendrobium grex Madame Thong-In]
Length = 286
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
KA I HP Y LL A++ C ++ P P I + L R A +A+ V+ D
Sbjct: 42 KARIASHPRYPHLLEAYIDCQKVGAP----PDIASLLEEIRRENAGGERLASSSVILGSD 97
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L ++ L++ EA +E L L + + G +S
Sbjct: 98 PELDEFMEMYCDVLVKYRRDLERPFD----EATAFLNTMEVQLSDLCKPTCRAALGPYVS 153
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
D E SD G + P+S G ER +LK +L + Y +
Sbjct: 154 D--EAVGSSDEELSGGEGEAPESHLKG------EER--------DLKEKLLRKYSGYLSS 197
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E +K++ GKLP + +L WW +H KWPYPT
Sbjct: 198 LKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPT 233
>gi|224133590|ref|XP_002321612.1| predicted protein [Populus trichocarpa]
gi|222868608|gb|EEF05739.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 32/229 (13%)
Query: 59 SNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA 118
SN N E+ + +A+I HPLY +LL A++ C ++ P + +D ++ DV
Sbjct: 27 SNSNNSQEE-ASCAIRAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLD-EIREENDVSK 84
Query: 119 KYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
+ + D ELD+FM Y +L +K L + EA D+E +L
Sbjct: 85 RSDNTVASCLGADPELDEFMETYCDILMKYKADLSRPFD----EATAFLNDIEAQFNTLC 140
Query: 179 GVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 238
T+ DED D D + D ELK
Sbjct: 141 N-----GASRTVGSSDEDASGGDAEVQDCTRANED---------------------RELK 174
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L Y I ++ E +K++ GKLP + +L WW H KWPYPT
Sbjct: 175 DKLLCKYSGYISTLKHEFSKKKKKGKLPKEAREVLLNWWTVHYKWPYPT 223
>gi|356501985|ref|XP_003519803.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 308
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I HP Y +LL A++ C ++ P ++ ++ ++ R D K AV++
Sbjct: 64 TTVMKAKIASHPHYPRLLQAYIECQKVGAPP-EIARLLEEIRRENDP-CKSDAVSSSTCF 121
Query: 130 D-DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGEST- 186
D ELD+FM Y +L +K L + EA +E L L TG S +
Sbjct: 122 GADPELDEFMEAYCDMLVKYKSDLARPFD----EATTFLNKIEMQLSHLCTGASVSNVSD 177
Query: 187 -GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
G SD+D D D DG L G D ELK L + +
Sbjct: 178 DGGVSSDEDLSTGDGDAQ--DGQLKGED---------------------RELKDRLLRKF 214
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 215 GSHIGTLKLEFSKKKKKGKLPKEARQALLQWWNVHYKWPYPT 256
>gi|363807946|ref|NP_001242710.1| uncharacterized protein LOC100805837 [Glycine max]
gi|255642659|gb|ACU21614.1| unknown [Glycine max]
Length = 350
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 31/220 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID-AQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I+ HP Y +LL+A+V+C ++ P + + +++ A S + +A + + +D
Sbjct: 95 KAKIMAHPHYRRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGDAAAAAGSSCIGEDP 154
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST--GATM 190
LDQFM Y +L ++++L + ++ EA++ +E ++LT S + GA
Sbjct: 155 ALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSTDFACNEGAER 210
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
+ E+ VD N D P +R ELK +L + Y +
Sbjct: 211 NGSSEEDVDLH-NMID---------------PQAEDR--------ELKGQLLRKYSGYLG 246
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 247 SLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQ 286
>gi|145280672|gb|AAT72917.2| class 1 knox [Dendrobium nobile]
Length = 287
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
KA I HP Y LL A++ C ++ P P I + L R A VA+ V+ D
Sbjct: 42 KARIASHPRYPHLLEAYIDCQKVGAP----PDIASLLEDIRRENAGGERVASSSVILGSD 97
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L ++ L++ EA +E L L + + G +S
Sbjct: 98 PELDEFMEMYCDVLVKYRRDLERPFD----EATAFLNTMEVQLSDLCKPTCRPALGPYVS 153
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
D E SD G + P+S G ER +LK +L + Y +
Sbjct: 154 D--EAVGSSDEELSGGEGEAPESHLKG------EER--------DLKEKLLRKYSGYLSS 197
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E +K++ GKLP + +L WW +H KWPYPT
Sbjct: 198 LKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPT 233
>gi|26023939|gb|AAN77691.1|AF483278_1 KNOTTED1-like homeodomain protein 3 [Picea abies]
Length = 433
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 55/308 (17%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N + H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVG--SGLRNQLEFHREQTGNGYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSWDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACW 168
++ + ++ D ELDQFM Y +L + E+L + + EA+
Sbjct: 209 LTREYQNQQRRTVSIGM-----DPELDQFMEAYCEILTKYHEELAKPFK----EAMTFLM 259
Query: 169 DLEQSLQSL----TGVSP-----GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGP 219
+E SL +SP ++ G S++ ED +T+F
Sbjct: 260 KIEAQFNSLGKGTIRISPPAENDKKTEGGGSSEEVEDGSGGETDF--------------- 304
Query: 220 LVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLS 279
E + +E ELK L + Y + +++E ++K++ GKLP D L WW
Sbjct: 305 ---QEVDHHAVED--RELKDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWSL 359
Query: 280 HAKWPYPT 287
H KW YP+
Sbjct: 360 HDKWSYPS 367
>gi|225458942|ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera]
Length = 370
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQL-SRSRDVLAKYSAVA 124
E KA+I+ HP Y LL A++ C ++ P V++L + + SR R S+V
Sbjct: 106 EVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVERLAAVRQEFESRQR------SSVT 159
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----- 179
D ELDQFM Y +L ++E+L + ++ EA +E L L+
Sbjct: 160 CRDASKDPELDQFMEAYYDMLVKYREELTRPLQ----EATDFMRRIESQLNMLSNGPVRI 215
Query: 180 -VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 238
S + G S++D+D +T P+ + P +R ELK
Sbjct: 216 FTSDEKCEGVGSSEEDQDNSGGETEL-------PE------IDPRAEDR--------ELK 254
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ L + Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 255 NHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 303
>gi|110294442|gb|ABG66654.1| BREVIPEDICELLUS [Cardamine hirsuta]
Length = 396
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 38/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P + + KI A Q + + + S + R D
Sbjct: 133 KAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDKITAARQEFEAHQLRSTPSVTESSR---D 189
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C L + G S G
Sbjct: 190 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLCQGPIHILNNPDGKSEG 248
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S D+E + +S +D P +R ELK+ L +
Sbjct: 249 -----MVSSDEEQENNSGGETELAEID-----------PRAEDR--------ELKNHLLK 284
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 285 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 330
>gi|449440664|ref|XP_004138104.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
gi|449477432|ref|XP_004155021.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 308
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I HPLY +L+ A ++C +++ P ++ KI Q +R ++ + V+ + D E
Sbjct: 80 RAKIASHPLYPKLVDAFLNCQKVSAP-PEVAKILDQYNRGNNIGNENPGVSTC-LGTDPE 137
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM + LL ++ L Q + EA ++E+ L L E T D
Sbjct: 138 LDEFMEIFCELLAKYELDLYQPLE----EASAFLKNMERQLNLLC-----EDTTRGYVSD 188
Query: 194 DEDQVDSDTNF---FDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
+E + D + G+ DG ELK L + Y I
Sbjct: 189 NEAASEEDISARGEVAGNKDG------------------------ELKERLLRKYGGHIS 224
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E + ++ LP + +L WW H++WPYPT
Sbjct: 225 SLKQEFSKTKKKEGLPKEAKQILLNWWNFHSQWPYPT 261
>gi|222625535|gb|EEE59667.1| hypothetical protein OsJ_12069 [Oryza sativa Japonica Group]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I+ HPLY LL A V C ++ P P++ +LS S V+ + R L
Sbjct: 72 KAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLS-SLAVVTDVPQYSGDRCLPAQQ 126
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L + ++L + ++++ + G+
Sbjct: 127 PAADPELDQFMETYCYMLTRYGQELAR--------------PIQEAEEFFRGI------- 165
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
E+Q+DS D S D D + G +P +S V + L Y
Sbjct: 166 -------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSG 216
Query: 248 KIVDIREEILRKRR--AGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + EI K++ G LP D L WW H +WPYP+
Sbjct: 217 YLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 258
>gi|4098240|gb|AAD00251.1| knotted 2 protein [Solanum lycopersicum]
Length = 354
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 34/216 (15%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTH 140
P Y +LL+A+++C +I P + + +++ + S + S+ G + +D LDQFM
Sbjct: 103 PHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEA 162
Query: 141 YVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD------DD 194
Y +L ++++L + + EA++ +E ++LT ++P S + + +
Sbjct: 163 YCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMDRNGSS 217
Query: 195 EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIRE 254
+++VD + +F D P +R ELK +L + Y + +++
Sbjct: 218 DEEVDVNNSFID---------------PQAEDR--------ELKGQLLRKYSGYLGSLKQ 254
Query: 255 EILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
E ++KR+ GKLP + L WWL H KWPYP+ S+
Sbjct: 255 EFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQ 290
>gi|356554470|ref|XP_003545569.1| PREDICTED: homeobox protein SBH1-like isoform 2 [Glycine max]
Length = 330
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 29/223 (13%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
+T + +I+ HPL+ +LLS++++CL++ P + + ++ ++ A S G +
Sbjct: 74 DTCSVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCESFNAS-SGRTGGSI 132
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+D LDQFM Y +L ++++L + + EA++ +E L++L S A
Sbjct: 133 GEDPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQLKALAVSSDFACNKA 188
Query: 189 TMSD-DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
+ S+ +++VD N D + ELK +L + Y
Sbjct: 189 SQSETSSQNEVDVHENNLDSQAED-----------------------RELKVQLLRKYSG 225
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 226 YLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSESQ 268
>gi|75226461|sp|Q75LX9.1|KNOS5_ORYSJ RecName: Full=Putative homeobox protein knotted-1-like 5
gi|40538948|gb|AAR87205.1| putative KNOX class homeodomain protein [Oryza sativa Japonica
Group]
Length = 337
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I+ HPLY LL A V C ++ P P++ +LS S V+ + R L
Sbjct: 72 KAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLS-SLAVVTDVPQYSGDRCLPAQQ 126
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L + ++L + ++++ + G+
Sbjct: 127 PAADPELDQFMETYCYMLTRYGQELAR--------------PIQEAEEFFRGI------- 165
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
E+Q+DS D S D D + G +P +S V + L Y
Sbjct: 166 -------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSG 216
Query: 248 KIVDIREEILRKRR--AGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + EI K++ G LP D L WW H +WPYP+
Sbjct: 217 YLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 258
>gi|380746847|gb|AFE48354.1| KNOTTED-like 1-3a homeodomain protein, partial [Cuscuta pentagona]
Length = 272
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR-DVLAKYSA-VANGRVLD 130
KA+I+ HP Y LL A++ C ++ P P + A+LS +R D ++ A + G
Sbjct: 9 VKAKIISHPHYSNLLEAYMECQKVGAP----PDVAARLSAARQDFESRQRATLLGGGHEK 64
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV-------SPG 183
D ELD+FM Y +L ++E+L + ++ EA+ +E L L+ S
Sbjct: 65 DPELDRFMEAYYDMLVKYREELTRPLQ----EAMEFMRRIESQLNMLSNAPVRVFNHSDE 120
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+ G S++D+D + P + P +R ELK+ L +
Sbjct: 121 KCEGVGSSEEDQDN------------NSPGETELPEIDPRAEDR--------ELKNHLLR 160
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 161 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 204
>gi|302142140|emb|CBI19343.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQL-SRSRDVLAKYSAVA 124
E KA+I+ HP Y LL A++ C ++ P V++L + + SR R S+V
Sbjct: 77 EVEAIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVVERLAAVRQEFESRQR------SSVT 130
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----- 179
D ELDQFM Y +L ++E+L + ++ EA +E L L+
Sbjct: 131 CRDASKDPELDQFMEAYYDMLVKYREELTRPLQ----EATDFMRRIESQLNMLSNGPVRI 186
Query: 180 -VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELK 238
S + G S++D+D +T P+ + P +R ELK
Sbjct: 187 FTSDEKCEGVGSSEEDQDNSGGETEL-------PE------IDPRAEDR--------ELK 225
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ L + Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 226 NHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 274
>gi|218193479|gb|EEC75906.1| hypothetical protein OsI_12975 [Oryza sativa Indica Group]
Length = 336
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA---VANGRVLD 130
KA+I+ HPLY LL A V C ++ P + + ++ + L+ D L YS +
Sbjct: 70 KAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSS-LAVVTDELESYSGDRWQPAQQPAA 128
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELDQFM Y +L + ++L + ++++ + G+
Sbjct: 129 DPELDQFMETYCYMLTRYGQELAR--------------PIQEAEEFFRGI---------- 164
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
E+Q+DS D S D D + G +P +S V + L Y +
Sbjct: 165 ----EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSGYLN 218
Query: 251 DIREEILRKRR--AGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ EI K++ G LP D L WW H +WPYP+
Sbjct: 219 SLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 257
>gi|26023937|gb|AAN77690.1|AF483277_1 KNOTTED1-like homeodomain protein 2, partial [Picea abies]
Length = 383
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--AQLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ H Y +L++A++ C ++ P D + ++D +Q ++ +A S A D
Sbjct: 123 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATISIGA------D 176
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELDQFM Y + ++E+L + + EA+ +E L +LT + T T S
Sbjct: 177 PELDQFMEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGALT-----KGTIRTSS 227
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
D D+ DG+ + G G V E ELK +L + Y +
Sbjct: 228 LDQGDERG------DGAASSEEEDGSGGEVEFHEVDPHAED--RELKDQLLRKYSGYLSS 279
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E L+K++ GKLP + L WW + KWPYP+ S+
Sbjct: 280 LKQEFLKKKKKGKLPKEARQKLLDWWTRNYKWPYPSESQ 318
>gi|224110918|ref|XP_002315682.1| predicted protein [Populus trichocarpa]
gi|222864722|gb|EEF01853.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 64 RAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--RSRDVLAKYS 121
R E+ + KA+I HP Y +LL A++ C ++ P P I L R + L K
Sbjct: 60 RTEEDMSALIKAKIASHPCYPRLLEAYIDCQKVGAP----PGIACFLDEIRRENDLFKQD 115
Query: 122 AVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
AV+ D ELD+FM Y LL +K L++ EA +E L++L
Sbjct: 116 AVSTYWGAD-PELDEFMETYCDLLVKYKSDLERPFD----EATTFLNKIEMQLRNLC--- 167
Query: 182 PGESTGATM-SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
TGA++ S DE SD G LD ++ P+ +R ELK +
Sbjct: 168 ----TGASIRSISDEGAPSSDEELSGGELDMHEAQ------PSGEDR--------ELKDK 209
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + + I ++ E +K++ GKLP + L WW +H KWPYPT
Sbjct: 210 LLRRFGSHIGTLKLEFSKKKKKGKLPKEARQTLLGWWDAHYKWPYPT 256
>gi|194688564|gb|ACF78366.1| unknown [Zea mays]
gi|414883466|tpg|DAA59480.1| TPA: rough sheath1 [Zea mays]
Length = 351
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-VLDDKELDQ 136
V HP Y LL+A++ C ++ P D L ++ A + AK A GR D ELDQ
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDARPPGRHEPRDPELDQ 147
Query: 137 FMTHYVLLLYSFKEQLQQHV-----RVHAMEAVMAC-WDLEQSLQSLTGVSPGESTGATM 190
FM Y +L ++E+L + + + +EA + C S + ++ G+S G
Sbjct: 148 FMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEGVGS 207
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S+DD D +G + P P + +E ELK++L + Y +
Sbjct: 208 SEDDMDP--------NGRENDP------PEIDPRAEDK-------ELKYQLLKKYSGYLS 246
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 247 SLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 283
>gi|224102455|ref|XP_002312684.1| predicted protein [Populus trichocarpa]
gi|222852504|gb|EEE90051.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I HP Y +LL A++ C ++ P Q+ + ++ R D+ K+ AV+ D
Sbjct: 69 VKAKIASHPSYPRLLEAYIDCQKVGAP-PQIARFLDEIRRENDLF-KHDAVST-YWGADP 125
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ-----HVRVHAMEAVMACWDLEQSLQSLTGVS------ 181
ELD+FM Y LL +K L++ ++ +E S++S++G S
Sbjct: 126 ELDEFMETYCDLLVKYKSDLERPFDEATTFLNKIEMQFRNICTAASIRSVSGQSLSLSLF 185
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PG+ + + + + + N DG+ D + G + E++ S +R ELK +L
Sbjct: 186 PGKDP---LGSELLNNISRNHNGSDGAPSSDDELSGGEMDMHEAQPSGEDR---ELKDKL 239
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 240 LRRFGGHIGTLKREFSKKKKKGKLPKEARQTLLGWWNVHYKWPYPT 285
>gi|449454010|ref|XP_004144749.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
gi|449490809|ref|XP_004158713.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
Length = 321
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
K +IV HPLY +L+SA++ C ++ P P++ + L R+ S++ G D
Sbjct: 61 KTQIVNHPLYPKLVSAYIECQKVGAP----PQVASLLEEIGRENHPSRSSIELGA---DP 113
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
+LD FM Y +L+ +K +L + EA M ++E L +L S TM
Sbjct: 114 QLDNFMESYCEVLHQYKNELSKPFD----EATMFLTNIELELSNLCKGS------FTMMS 163
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D ++ + + G+ + S +P E + + +LK L + Y + +
Sbjct: 164 DSRSAMNDEVS---GTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSL 220
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++E L+KR+ KLP D L WW +H KWPYPT
Sbjct: 221 KKEFLKKRKKEKLPKDARMALLDWWNTHYKWPYPT 255
>gi|295149266|gb|ADF81046.1| KNOTTED-like homebox protein 1 [Cocos nucifera]
Length = 333
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 41/238 (17%)
Query: 62 NGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS------RD 115
N ED++ KA+I+ HP Y +LLSA+V+C ++ P + + +++ + S
Sbjct: 58 NAGGEDYDDSIIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEACATSLMMGRASS 117
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
A + G +D LDQFM Y +L ++++L + + EA++ ++ +
Sbjct: 118 SAAAGDGGSGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIDAQFK 173
Query: 176 SLTGVSP------GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSL 229
SL+ +P GE S ++E + ++ D P +R
Sbjct: 174 SLSLSTPPPPQVYGEQLERNGSSEEE--FGASGSYVD---------------PQAEDR-- 214
Query: 230 MERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + +++E L+KR+ GKLP + L WW H KWPYP+
Sbjct: 215 ------ELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQLLDWWNRHYKWPYPS 266
>gi|3327271|dbj|BAA31699.1| PKn2 [Ipomoea nil]
Length = 322
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 66 EDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSA--V 123
+D +V KA+I HP Y +LL A++ C ++ P + +D ++ R D L K
Sbjct: 76 DDVSSVMIKAKIASHPCYPKLLHAYIDCQKVGAPPEIATVLD-EIRREDDELRKRGGGGA 134
Query: 124 ANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
+ + D ELD+FM Y +L +K L + EA +E L +L
Sbjct: 135 VSSCLGADPELDEFMETYYDMLVKYKSDLSKPFH----EATTFLNTIETQLSNLCK---- 186
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+ +GA SD+++ ++D + S+ + +LK+ L +
Sbjct: 187 DESGAVSSDEEDSGGETDIQ----------------------QESITKTEERQLKNTLLR 224
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 225 KYGSHLSSLKLEFSKKKKKGKLPKEARQTLLDWWSDHYKWPYPT 268
>gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thaliana]
gi|15991300|dbj|BAB69678.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
Length = 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + D E
Sbjct: 83 KAKIACHPSYPRLLQAYIDCQKVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGADPE 140
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGATM 190
LD+FM Y +L +K L + EA +E L++L TGV + G S +
Sbjct: 141 LDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDGVI 196
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S D+E L G D V + + +R +LK L + + +I
Sbjct: 197 SSDEE-------------LSGGDHE-----VAEDGRQRCEDR---DLKDRLLRKFGSRIS 235
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 236 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 272
>gi|42570557|ref|NP_850951.2| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
gi|75146711|sp|Q84JS6.1|KNAT6_ARATH RecName: Full=Homeobox protein knotted-1-like 6; AltName:
Full=Protein KNAT6
gi|27754596|gb|AAO22744.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
gi|28393913|gb|AAO42364.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
gi|332192260|gb|AEE30381.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
Length = 327
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + D E
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGADPE 143
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGATM 190
LD+FM Y +L +K L + EA +E L++L TGV + G S +
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDGVI 199
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S D+E L G D V + + +R +LK L + + +I
Sbjct: 200 SSDEE-------------LSGGDHE-----VAEDGRQRCEDR---DLKDRLLRKFGSRIS 238
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 275
>gi|242037977|ref|XP_002466383.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
gi|241920237|gb|EER93381.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
Length = 349
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR---VLD 130
KA+I+ HP Y LL+A++ C ++ P P + +LS L + R
Sbjct: 92 KAKIMSHPQYSALLAAYLDCQKVGAP----PDVSDRLSAMAAKLGAQPGPSRWREPTTRP 147
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELDQFM Y +L F+E++ + ++ EA +E+ LQ L +S +S+ +
Sbjct: 148 DPELDQFMEAYCNMLVKFQEEMARPIQ----EATEFFKSVERQLQ-LGSIS--DSSNCEV 200
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
+ ED+ D+ P+ + P ++ ELKH+L + Y +
Sbjct: 201 AGSSEDEQDASC---------PEDID-----PCAEDK--------ELKHQLLRKYGGYLG 238
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R+E ++++ GKLP + L WW H KWPYP+
Sbjct: 239 GLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 275
>gi|22023962|gb|AAM89270.1|AF527947_1 homeodomain protein BOSTM-1 [Brassica oleracea]
Length = 380
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 40/227 (17%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGR 127
+ KA+I+GHP Y +LL A+V+C ++ P P++ A+L + A +A G
Sbjct: 118 SASVKAKIMGHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 173
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G
Sbjct: 174 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSPFSG 229
Query: 188 ---ATMSDDD----EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
A + ++ E++VD + F D P +R ELK +
Sbjct: 230 YGEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQ 266
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 267 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|345649243|gb|AEO14152.1| STM2 protein [Eschscholzia californica subsp. californica]
Length = 385
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR-DVLAKYSAVANGRVL--D 130
+A+I+ HP Y +LL+A+++C ++ P + + ++D LS + + S G VL +
Sbjct: 116 RAKIMAHPHYPRLLAAYINCHKVGAPPEVVKRLDEILSADKVNRSRSSSTGGGGGVLLGE 175
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D LDQFM Y +L +++QL + ++ EA++ L L+ L +P ++
Sbjct: 176 DPSLDQFMEAYSEMLIKYEQQLTKPLQ----EAMLFLSSLHSQLKXLD--TPLTNSPPPP 229
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
Q S DG +D ++ + + P +R ELK +L + Y +
Sbjct: 230 PHSSSGQNGSS----DGEIDANNNDNY--IDPQAEDR--------ELKLQLLRKYSGCLG 275
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 276 SLKQEFMKKRKKGKLPKEAREQLLDWWSRHYKWPYPSESQ 315
>gi|66865825|gb|AAY57561.1| liguleless 3 [Zea mays]
Length = 216
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRI-ATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I HP Y LLSA++ C ++ A P + + ++SR R A G + D
Sbjct: 29 KAQIASHPRYPSLLSAYIECRKVGAHP--HVTSLLEEVSRERRPDA-----GAGEIGVDP 81
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD+FM Y +L +KE+L + EA ++ L L S G S AT +
Sbjct: 82 ELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDL--CSGGSSPAATATH 135
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+ S+ G D PD MG E L + HELK L + Y + +
Sbjct: 136 SDDMMGSSEDEQCSGDTDVPD-MG------QEHSSHLGD---HELKEMLLKKYSGCLSRL 185
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKW 283
R E L+KR+ GKLP D ++L WW +H +W
Sbjct: 186 RSEFLKKRKKGKLPKDARTVLLEWWNTHYRW 216
>gi|117644096|emb|CAL49292.1| putative shoot meristemless ortholog 1 [Silene latifolia]
Length = 271
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 76 EIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV-LAKYSAVANGRVLDDKEL 134
+I+ HP Y +L+SA V+C ++ P P++ A+L + + + + G + +D L
Sbjct: 1 KIMAHPHYPRLISAFVNCQKVGAP----PEVVARLEEAEAMAMNQGGGGGGGYIGEDPGL 56
Query: 135 DQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS----------PG- 183
DQFM Y +L ++++L + + EA++ ++ ++LT S PG
Sbjct: 57 DQFMEAYSEMLTKYEQELSKPFK----EAMLFLSKIDCQXKALTLSSSLDSPSSDLVPGA 112
Query: 184 -ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
+ G + ED++D + NF D P+ +R ELK +L
Sbjct: 113 HDDAGTGRNGSSEDEIDVNNNFID---------------PSAEDR--------ELKGQLL 149
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ Y + +R+E L+KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 150 RKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 197
>gi|285804237|gb|ADC35599.1| class I KNOX homeobox transcription factor STM-like 1 [Prunus
persica]
Length = 329
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS-AVANGRVLD 130
+ +A+I+ HPL+ +LL+++VSC ++ P P++ A+L ++ S A G
Sbjct: 69 RMEAKIMAHPLFPRLLASYVSCQKVGAP----PEVVARLEQACSAAVHNSEAACLGGGDP 124
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT--GVSPGESTGA 188
D LDQFM Y +L ++E+L + + EA++ ++ LQ+LT S S+G
Sbjct: 125 DPALDQFMEAYCEMLTKYEEELTKPFK----EAMLFLSKIDSQLQALTVHSSSDSASSGD 180
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ + D + +D P +R ELK +L + Y
Sbjct: 181 NIVGRSGSPEEVDATMNESCID-----------PRAEDR--------ELKAKLLRKYTGY 221
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +++E ++K++ GKLP + L WW H KWPYP+
Sbjct: 222 LGSLKQEFMKKKKNGKLPKEARHQLLDWWSRHYKWPYPS 260
>gi|226508000|ref|NP_001149651.1| homeobox protein rough sheath 1 [Zea mays]
gi|32351469|gb|AAP76320.1| homeobox transcription factor GNARLY1 [Zea mays]
gi|195628960|gb|ACG36242.1| homeobox protein rough sheath 1 [Zea mays]
gi|414592152|tpg|DAA42723.1| TPA: gnarley1 [Zea mays]
Length = 360
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR- 127
E KA+IV HP Y LL+A++ C ++ P D L ++ A + AK A GR
Sbjct: 90 EADAIKAKIVAHPQYSALLAAYLDCQKVGAPPDLLERLTA-------MAAKLDARPPGRH 142
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHV--RVHAMEAVMACWDLEQSLQSLTGVSP--- 182
D ELDQFM Y +L ++E+L + + + ++ V A D S +
Sbjct: 143 GPRDPELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDSIAGGGSSSSARLSLA 202
Query: 183 -GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
G+S+ S +D+D S G + P P + +E ELK++L
Sbjct: 203 DGKSSEGAGSSEDDDMDPS------GRENEP------PEIDPRAEDK-------ELKYQL 243
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 244 LKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 289
>gi|5802260|gb|AAD51632.1|AF170172_1 KNOX1 homeodomain protein [Acetabularia acetabulum]
Length = 382
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 76 EIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ-------LSRSRDVLAKYSAVANGRV 128
+++ HPLY L+ A + C ++ + I + L R R+ +Y
Sbjct: 59 QVIMHPLYPDLVKAIMDCRKVGGMDESRHHIQIRTEQVLEDLHRKRE---QYQITGRMPA 115
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
LD ELDQF+ Y+ +L +L R EA + + + P +
Sbjct: 116 LD-PELDQFLRQYIQVLDELHAELLNINR----EADNILHMFTTQIAEVINM-PMDPRSM 169
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ Q + D +F+ + E E+ ++ LKQ Y+++
Sbjct: 170 HARNAFNAQSNIDMTWFE--------------IRNEQEQRVL----------LKQKYRQE 205
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLNS 308
++ ++EE ++++ GKLP + +LK+WW H WPYPT S S + + SI N
Sbjct: 206 LLALKEEFSKRKKRGKLPTHSIEVLKSWWKEHIAWPYPTDSAKRSLASQTNLTSIQINNW 265
Query: 309 YL 310
++
Sbjct: 266 FI 267
>gi|168831394|gb|ACA34978.1| KNOX1 [Streptocarpus rexii]
Length = 358
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKY----SAVA 124
E KA+I+ HP Y LL A++ C R+ P P++ A+L+ R A
Sbjct: 92 EVDAIKAKIIAHPQYSNLLEAYLDCQRVGAP----PEVVARLTAVRQEFEARQRAGGAAD 147
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG----V 180
V D ELDQFM Y +L ++E+L + ++ EA+ +E L +T +
Sbjct: 148 RDHVSKDPELDQFMEAYYDMLVKYREELSRPLQ----EAMEFMRRIESQLNMITNCPVRI 203
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
S E + +EDQ +S +D P +R ELK+
Sbjct: 204 SNPEEKCEGIVSSEEDQENSAGETELAEID-----------PRAEDR--------ELKNH 244
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 245 LLRKYSGYLSSLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 293
>gi|4589882|dbj|BAA76904.1| homeobox 20 [Nicotiana tabacum]
Length = 356
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP LL A++ C ++ P P++ A+LS R + + +
Sbjct: 101 EVDALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVVARLSAVRQEFEVRQRDSSTDR 156
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V D ELDQFM Y +L ++E+L + + EA+ D + +++ + +
Sbjct: 157 DVSKDPELDQFMEAYYDMLVKYREELTRPLH----EAM----DFMRKIETQLNMLEDKCE 208
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G S++++D +T P+ + P +R ELK+ L + Y
Sbjct: 209 GVGSSEEEQDNSGGETEI-------PE------IDPRAEDR--------ELKNHLLRKYS 247
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 248 GYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 290
>gi|371767716|gb|AEX56213.1| knotted-like 3 protein, partial [Dactylorhiza fuchsii]
Length = 287
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG---RVLD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+LS + L A G
Sbjct: 69 KAKIISHPQYPALLTAYMDCQKVGAP----PEVIARLSAAAHELEGRQLAALGCRRGSPA 124
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELDQFM Y +L +KEQL + V+ EA+ +E L SLT G +T A
Sbjct: 125 DPELDQFMEAYCNMLVKYKEQLTRPVQ----EAMDFLRKIESQLNSLTY---GTTTAAPF 177
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG--YKEK 248
D D S + D+ G E+E + ++ + + +L Y
Sbjct: 178 LSS-ADLADEKCEGVVSSEEDQDAGG------AEAEVAELDPRAEDKELKLHLLKKYSGY 230
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 231 LSSLRQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 269
>gi|189046914|dbj|BAG34610.1| class-I knotted1-like homeobox protein IBKN4 [Ipomoea batatas]
Length = 314
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 58 ASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVL 117
A+ + +D +V KA+I HP Y +LL A++ C ++ P + +D ++ R D L
Sbjct: 59 AAGGDNEDKDVSSVMIKAKIASHPCYPKLLHAYIDCQKVGAPPEIATVLD-EIRREDDEL 117
Query: 118 AKYSAVANGRVLD----DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQS 173
K G V D ELD+FM Y +L +K L + EA +E
Sbjct: 118 RKRGGGGGGAVSSCLGADPELDEFMETYYDMLVKYKSDLSRPFH----EATTFLNTIETQ 173
Query: 174 LQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERV 233
L +L ES GA S D DS G T+ + S+ +
Sbjct: 174 LSNLC---KDESGGA-------------------SSDEEDSGG-----ETDIQESITKTE 206
Query: 234 RHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LK+ L + Y + ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 207 ERQLKNTLLRKYGSHLSSLKLEFSKKKKKGKLPKEARQTLLDWWSDHYKWPYPT 260
>gi|356526781|ref|XP_003531995.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 317
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + V D E
Sbjct: 78 KAKIASHPHYPRLLQAYIDCQKVGAP-PEIACLLEEIRRENDV-CKRDVVVSTCVEADPE 135
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E L L S+ T+SDD
Sbjct: 136 LDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDLCS----GSSLLTLSDD 187
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V S+ F G D D + ELK L + + I ++
Sbjct: 188 G--GVSSEEGFSAGDGDPQDGQ--------------LRSEDRELKDRLLRKFGSHIGYLK 231
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP D L WW H KWPYPT
Sbjct: 232 LEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPT 265
>gi|85543296|gb|ABC71528.1| KNOTTED1 homeodomain protein [Setaria italica]
Length = 344
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LD 130
+A+I+ HP Y LL+A++ C ++ P P++ A+L+ L A G +
Sbjct: 94 IRAKIISHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAAT 149
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELDQFM Y +L F+E+L + ++ AME + SL S++G S +
Sbjct: 150 EPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQLNSL-SISGRSLRNILSSGS 207
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S++D++ +T + G D ELKH L + Y +
Sbjct: 208 SEEDQEGSGGETEIPEVDAHGED---------------------QELKHHLLKKYSGYLS 246
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E+ +K++ GKLP + L +W H KWPYP+
Sbjct: 247 SLKQELSKKKKKGKLPKEARQHLLSWRDLHYKWPYPS 283
>gi|11463941|dbj|BAB18584.1| CRKNOX2 [Ceratopteris richardii]
Length = 430
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+ +IV HP Y +L+ A+V+C +I P D ++ + +++ + S V D E
Sbjct: 132 RTKIVSHPSYPRLVMAYVNCYKIGAPEDAALILEEVSRKYQEIRSSSSEVIGA----DPE 187
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWD-LEQSLQSLTGVS-----PGES-- 185
LD FM Y +L + E+L H + MA + +E L +++ S GE+
Sbjct: 188 LDNFMELYCNVLQRYHEEL-----THPYKEAMAFFKKIELQLDAISKGSLSLSQSGETKT 242
Query: 186 -----------TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR 234
TGA S +DE + + + G +D D M PL +
Sbjct: 243 EANSDSAWHGQTGAAPSIEDEPE---EGDMSSGEVDFHDEM-IDPLAEDQ---------- 288
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LK +L + Y I +++E L+K++ GKLP + +L WW H KWPYP+
Sbjct: 289 -KLKEQLLRKYSGYIFKLKQEFLKKKKKGKLPREARQMLLDWWTQHYKWPYPS 340
>gi|297838847|ref|XP_002887305.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
lyrata]
gi|297333146|gb|EFH63564.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 24/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY +LL ++ C ++ P+ ++ I ++ + V + A + DD E
Sbjct: 69 KSKIACHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQQENHVYKRDVAPLSC-FGDDPE 126
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E LQ+L G ++ +SDD
Sbjct: 127 LDEFMETYCDILVKYKTDLARPFD----EAATFINKIEMQLQNLCT---GPASATALSDD 179
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
G+L + + V + S +LK +L + + I ++
Sbjct: 180 -------------GALSSDEELREDDHVTAQD--SQQRSNDRDLKDQLLRKFGSHISSLK 224
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP + L WW H KWPYPT
Sbjct: 225 LEFSKKKKKGKLPREARQALFDWWNVHYKWPYPT 258
>gi|300676307|gb|ADK26523.1| HERMIT-like protein 2 [Petunia x hybrida]
Length = 332
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL A++ C ++ P + + ++ ++ +++ G D E
Sbjct: 102 KAKIISHPYYPKLLDAYIDCQKVGAPSEMINILEEMRQQNDFRKPNATSICIGA---DPE 158
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA ++E L +L
Sbjct: 159 LDEFMETYCDILVKYKSDLSRPFN----EATTFLNNIELQLTNLCK-------------- 200
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
D+ + SD F G E + + M +ELK L + + + ++
Sbjct: 201 DDGSLSSDEEFSCGE--------------AEVQDASMRSEDNELKDRLLRKFGSHLSTLK 246
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
E +K++ GKLP + +L AWW H +WPYPT + NS
Sbjct: 247 LEFSKKKKKGKLPKEARQMLLAWWNDHYRWPYPTEADKNS 286
>gi|33333546|gb|AAQ11889.1| knotted 2 [Nicotiana tabacum]
Length = 341
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 29/263 (11%)
Query: 29 NAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLS 88
+++ HHHH + +N+ S +G D KA+I+ HP LL
Sbjct: 40 SSISHHHHTFQYPSIIRSGYHHQTVQNHHESESSGSEVD----ALKAKIIAHPQCSNLLD 95
Query: 89 AHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLDDKELDQFMTHYVLLLY 146
A++ C ++ P P++ A+LS R + + + V D ELDQFM Y +L
Sbjct: 96 AYMDCQKVGAP----PEVVARLSAVRQEFEVRQRDSSTDRDVSKDPELDQFMEAYYDMLV 151
Query: 147 SFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFD 206
++E+L + + EA+ +E L L G + ED+ +
Sbjct: 152 KYREELTRPLH----EAMDFMRKIETQLNML-------GNGPVRIFNSEDKCEG----VG 196
Query: 207 GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLP 266
S + D+ G +P R+ ELK+ L + Y + +++E+ +K++ GKLP
Sbjct: 197 SSEEEQDNSGGETEIPEIDPRA----EDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLP 252
Query: 267 GDTTSLLKAWWLSHAKWPYPTVS 289
D L +WW H KWPYP+ S
Sbjct: 253 KDARQKLLSWWELHYKWPYPSES 275
>gi|42563111|ref|NP_177208.2| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
gi|21431769|sp|P46640.3|KNAT2_ARATH RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=Protein ATK1; AltName: Full=Protein KNAT2
gi|606952|gb|AAA67882.1| knotted-like homeobox protein [Arabidopsis thaliana]
gi|332196952|gb|AEE35073.1| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
Length = 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY +LL ++ C ++ P+ ++ I ++ R V + A + D E
Sbjct: 70 KSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC-FGADPE 127
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E LQ+L G ++ +SDD
Sbjct: 128 LDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT---GPASATALSDD 180
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V SD + + +S++ +R +LK +L + + I ++
Sbjct: 181 G--AVSSDEELREDD----------DIAADDSQQRSNDR---DLKDQLLRKFGSHISSLK 225
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP + L WW H KWPYPT
Sbjct: 226 LEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
>gi|98962493|gb|ABF59514.1| shoot meristemless [Cardamine hirsuta]
Length = 383
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 40/223 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + +A G + +D
Sbjct: 123 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAVAAAASMGPTGCLGED 178
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 179 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 234
Query: 192 DDD-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
D E++VD + F D P +R ELK +L +
Sbjct: 235 AMDRNNNGSSEEEVDMNNEFID---------------PQAEDR--------ELKGQLLRK 271
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 272 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 314
>gi|289655986|gb|ADD14041.1| class 1 KNOTTED-like transcription factor STM-like1 [Prunus
persica]
Length = 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS-AVANGRVLD 130
+ +A+I+ HPL+ +LL+++VSC ++ P P++ A+L ++ S A G
Sbjct: 69 RMEAKIMAHPLFPRLLASYVSCQKVGAP----PEVVARLEQACSAAVHNSEAACLGGGDP 124
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT--GVSPGESTGA 188
D LD+FM Y +L ++E+L + + EA++ ++ LQ+LT S S+G
Sbjct: 125 DPALDKFMEAYCEMLTKYEEELTKPFK----EAMLFLSKIDSQLQALTVHSSSDSASSGD 180
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+ + D + +D P +R ELK +L + Y
Sbjct: 181 NIVGRSGSPEEVDATMNESCID-----------PRAEDR--------ELKAKLLRKYTGY 221
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +++E ++K++ GKLP + L WW H KWPYP+
Sbjct: 222 LGSLKQEFMKKKKNGKLPKEARHQLLDWWSRHYKWPYPS 260
>gi|4589884|dbj|BAA76905.1| homeobox 22 [Nicotiana tabacum]
Length = 319
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--RSRDVLAKYSAVANGRVLDD 131
KA++V HP Y + + A++ C ++ P P+I L R ++ K +A + + D
Sbjct: 89 KAKVVSHPFYPKFVRAYIDCQKVGAP----PEIATVLEEIRQQNDFRKPNATSIC-IGAD 143
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +K L + EA +E L +L
Sbjct: 144 PELDEFMETYCDILVKYKSDLSRPFD----EATTFLSKIELQLSNLCK------------ 187
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
D+ V SD G ++G D+ S+RS +ELK L + + +
Sbjct: 188 --DDGGVSSDEELSCGEVEGQDA----------SQRS----EDNELKDRLLRKFGSHLST 231
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
++ E +K++ GKLP + +L AWW H +WPYPT + NS
Sbjct: 232 LKLEFSKKKKKGKLPKEARQMLLAWWNDHYRWPYPTEADKNS 273
>gi|984046|emb|CAA57122.1| ATK1 [Arabidopsis thaliana]
gi|984048|emb|CAA57121.1| ATK1 [Arabidopsis thaliana]
Length = 311
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY +LL ++ C ++ P+ ++ I ++ R V + A + D E
Sbjct: 70 KSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC-FGADPE 127
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E LQ+L G ++ +SDD
Sbjct: 128 LDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT---GPASATALSDD 180
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V SD + + +S++ +R +LK +L + + I ++
Sbjct: 181 G--AVSSDEELREDD----------DIAADDSQQRSNDR---DLKDQLLRKFGSHISSLK 225
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP + L WW H KWPYPT
Sbjct: 226 LEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
>gi|356535014|ref|XP_003536044.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 1
[Glycine max]
Length = 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY L+SA++ C ++ P +L + +++R Y A + DD E
Sbjct: 52 KSQIATHPLYPNLVSAYIECRKVGAP-PELASLLEEIARE-----SYPTDALREIGDDPE 105
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L+ +K++L + EA + +E L +L G
Sbjct: 106 LDEFMESYCEVLHRYKQELSKPFN----EATLFLCSIESQLSNLC-------KGTLTMPL 154
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVR-HELKHELKQGYKEKIVDI 252
D + D + + D + + + E S R ELK L + Y + +
Sbjct: 155 DNNHSD------EAAGTSEDELSWEKVEAVEGHESSGPRPGDQELKEMLLRKYGGYLSSL 208
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++E L+KR+ GKLP D +L WW +H +WPYPT
Sbjct: 209 KKEFLKKRKKGKLPKDARMVLMDWWNTHYRWPYPT 243
>gi|33333548|gb|AAQ11890.1| knotted 3 [Nicotiana tabacum]
Length = 340
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP LL A++ C ++ P P++ A+LS R + + +
Sbjct: 75 EVDALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVVARLSAVRQEFEVRQRDSSTDR 130
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ D ELDQFM Y +L ++E+L + + EA+ +E L L
Sbjct: 131 NIAKDPELDQFMEAYYDMLVKYREELTRPLH----EAMDFMRKIETQLNML-------GN 179
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G + ED + S + D+ G +P R+ ELK+ L + Y
Sbjct: 180 GPVRIFNSEDNCEG----VGSSEEEQDNSGGETEIPQIDPRA----EDRELKNHLLRKYS 231
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 232 GYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 274
>gi|449529644|ref|XP_004171808.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
2-like [Cucumis sativus]
Length = 397
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS---AVANGRVL 129
KA+I+ H L+ +L A + C + P P++ A+L+ R+ + A A G +
Sbjct: 132 IKAKILSHSLFSNILQAFLDCQNVGAP----PEVAAKLTSVREEFERQRSSMATAEGSSI 187
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS-------P 182
D ELDQFM Y +L ++E+L++ ++ EAV +E L +L S
Sbjct: 188 D-PELDQFMEAYYGMLVKYREELRRPIQ----EAVDFMHRIESQLNTLCNGSFQILPSGK 242
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
E G++ ++ E + + + +D P ER ELK+ L
Sbjct: 243 SEGMGSSTEEEAEKGGEEEREIEEDQID-----------PRAEER--------ELKNHLX 283
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 284 KKYSGYLSSLKQELSKKKKKGKLPKDARQQLLRWWELHNKWPYPS 328
>gi|15220767|ref|NP_176426.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
gi|20141647|sp|Q38874.2|STM_ARATH RecName: Full=Homeobox protein SHOOT MERISTEMLESS
gi|332195837|gb|AEE33958.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
Length = 382
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 40/223 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 192 DDD-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
D E++VD + F D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|1167916|gb|AAC49148.1| class I knotted-like homeodomain containing protein; Method:
conceptual translation supplied by author [Arabidopsis
thaliana]
gi|1586022|prf||2202329A homeo domain protein
Length = 382
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 40/223 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 192 DDD-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
D E++VD + F D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|66865829|gb|AAY57562.1| knotted 1-type homeobox protein 8 [Zea mays]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 79 GHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV----LAKYSAVANGRVLDDKEL 134
HP Y LL+A++ C ++ P D ++ A + + D +++ R DD EL
Sbjct: 1 AHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTRA-DDPEL 59
Query: 135 DQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDD 194
DQFM Y +L F E++ + ++ EA +E+ L G+T+SD +
Sbjct: 60 DQFMEAYCNMLVKFHEEMARPIQ----EATEFFNSMERQL------------GSTISDSN 103
Query: 195 EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIRE 254
+ S + D S P E + ++ ELKH+L + Y + +R+
Sbjct: 104 CEVAGSSEDEQDAS------------CPEEIDPCAEDK---ELKHQLLRKYGGYLGGLRQ 148
Query: 255 EILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E ++++ GKLP + L WW H KWPYP+
Sbjct: 149 EFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 181
>gi|356554468|ref|XP_003545568.1| PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max]
Length = 325
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
+T + +I+ HPL+ +LLS++++CL++ P + + ++ ++ A S G +
Sbjct: 74 DTCSVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCESFNAS-SGRTGGSI 132
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+D LDQFM Y +L ++++L + + EA++ +E L++L VS
Sbjct: 133 GEDPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQLKAL-AVSSDFGQSE 187
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
T S +++VD N D + ELK +L + Y
Sbjct: 188 TSS---QNEVDVHENNLDSQAED-----------------------RELKVQLLRKYSGY 221
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E L+K++ GKLP + L WW H KWPYP+ S+
Sbjct: 222 LGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSESQ 263
>gi|7940290|gb|AAF70849.1|AC003113_16 F2401.9 [Arabidopsis thaliana]
Length = 377
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 35/218 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP + +
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSAIDRN 233
Query: 192 DD--DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
++ E++VD + F D P +R ELK +L + Y +
Sbjct: 234 NNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRKYSGYL 270
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 308
>gi|290796117|gb|ADD64788.1| SHOOT MERISTEMLESS [Brassica rapa]
Length = 382
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 40/227 (17%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGR 127
+ KA+I+GHP Y +LL A+V+C ++ P P++ A+L + A +A G
Sbjct: 118 SASVKAKIMGHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 173
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G
Sbjct: 174 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSFSG 229
Query: 188 ---ATMSDDD----EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
A + ++ E++VD + F D P + + ELK +
Sbjct: 230 YGEAAIERNNNGSSEEEVDMNNEFVD-----PQAEDW------------------ELKGQ 266
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 267 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|25386225|pir||A96729 homeotic protein (ATK1), 26548-32058 [imported] - Arabidopsis
thaliana
gi|12325041|gb|AAG52468.1|AC010796_7 homeotic protein (ATK1); 26548-32058 [Arabidopsis thaliana]
Length = 311
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY +LL ++ C ++ P+ ++ I ++ R V + A + D E
Sbjct: 70 KSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC-FGADPE 127
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E LQ+L G ++ +S D
Sbjct: 128 LDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT---GPASATALSAD 180
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
D V SD + + +S++ +R +LK +L + + I ++
Sbjct: 181 D-GAVSSDEELREDD----------DIAADDSQQRSNDR---DLKDQLLRKFGSHISSLK 226
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP + L WW H KWPYPT
Sbjct: 227 LEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 260
>gi|255084752|ref|XP_002504807.1| knox-like protein [Micromonas sp. RCC299]
gi|226520076|gb|ACO66065.1| knox-like protein [Micromonas sp. RCC299]
Length = 470
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 30/260 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
+A + +P Y +LL A+ +C R+ + + + + S LD
Sbjct: 174 RAAVRANPRYPKLLDAYFACRRVGADATSKASLARRRRQLLREATEVSCGTMRAALDACV 233
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWD---------------LEQ 172
ELD+FM + L ++ E+L E AC + L
Sbjct: 234 RRYGAELDEFMDNVTDELTAYAEELGACFD----EVDAACREAEARVAATAAKKLNALNV 289
Query: 173 SLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMER 232
S ++ VS + + E + DSDT GS + S ++ S +
Sbjct: 290 SAKTSRPVSTAAKKSVKVEPNAERESDSDTG---GSDEDEASAWVRRRRRKAAKESKIPD 346
Query: 233 VRHE-LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRT 291
R + L+ LK+ Y I+ +++E L+K + GKLP T LK WWL++ WPYP+
Sbjct: 347 TREDDLRKSLKRKYASSILALKDEFLKKTKKGKLPSSATKTLKEWWLANLLWPYPSEDAK 406
Query: 292 NSCIAISLFNSICTLNSYLV 311
+ + ++ N +N++ +
Sbjct: 407 RALMKLAGLNQT-QINNWFI 425
>gi|297837183|ref|XP_002886473.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
lyrata]
gi|297332314|gb|EFH62732.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + +++ S + A G + +D
Sbjct: 72 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVVRLEEACSSAAAAAASMGPT--GCLGEDPG 129
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 130 LDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGETAI 185
Query: 194 D-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
D E++VD + F D P +R ELK +L + Y
Sbjct: 186 DRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRKYS 222
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 223 GYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 263
>gi|19424064|gb|AAL87330.1| putative homeobox protein [Arabidopsis thaliana]
Length = 326
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 40/223 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 66 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 121
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 122 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 177
Query: 192 DDD-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
D E++VD + F D P +R ELK +L +
Sbjct: 178 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 214
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 215 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 257
>gi|225425603|ref|XP_002263313.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
gi|297739081|emb|CBI28570.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 29/224 (12%)
Query: 64 RAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV 123
R ED +V KA+I HP Y +LL A++ C ++ P + +D ++ R DV K AV
Sbjct: 72 REEDVSSV-IKAKIASHPCYPRLLEAYIDCQKVGAPPEIACLLD-EIRRENDV-CKRDAV 128
Query: 124 ANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPG 183
+ + D ELD+FM Y +L +K L + EA +E L +L
Sbjct: 129 STC-LGADPELDEFMETYCDMLEKYKSDLARPFD----EATTFLNKIEMQLGNLC----- 178
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+ + S DE V SD +F G E + + ELK L +
Sbjct: 179 -NDASIRSLPDEAVVSSDEDFSGGE---------------EVQEAQPRGEDQELKERLLR 222
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 223 RFGGRISSLKLEFSKKKKKGKLPKEARQTLLEWWNLHYKWPYPT 266
>gi|449467124|ref|XP_004151275.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 397
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYS---AVANGRVL 129
KA+I+ H L+ +L A + C + P P++ A+L+ R+ + A A G +
Sbjct: 132 IKAKILSHSLFSNILQAFLDCQNVGAP----PEVAAKLTSVREEFERQRSSMATAEGSSI 187
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS-------P 182
D ELDQFM Y +L ++E+L++ ++ EAV +E L +L S
Sbjct: 188 D-PELDQFMEAYYGMLVKYREELRRPIQ----EAVDFMHRIESQLNTLCNGSFQILPSGK 242
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
E G++ ++ E + + + +D P ER ELK+ L
Sbjct: 243 SEGMGSSTEEEAEKGGEEEREIEEDQID-----------PRAEER--------ELKNHLL 283
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 284 KKYSGYLSSLKQELSKKKKKGKLPKDARQQLLRWWELHNKWPYPS 328
>gi|302791343|ref|XP_002977438.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300154808|gb|EFJ21442.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 313
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQ 136
I GHP Y++LL AH++C ++ D ++D +L R R+ + + + D ELDQ
Sbjct: 75 ISGHPQYKELLRAHMNCYKVGASADLAAQMD-ELVRKRE----FESAVKTSIGVDPELDQ 129
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDED 196
FM Y +L +++ +L++ + EA+ C E L S+ VS + S ++ED
Sbjct: 130 FMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVS---NIDVLSSAENED 181
Query: 197 QVDSDTNFFDGSLDGPDSMGFGP----LVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
++ +F + + G G G L P ++ ELK L + Y I +
Sbjct: 182 ASETYEDFMEEAESG----GIGEVDTDLDPLAGDK--------ELKKVLMKRYGGYIKGL 229
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYP 286
+E L+K++ GKLP ++ L WW H PYP
Sbjct: 230 TQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 263
>gi|302786494|ref|XP_002975018.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300157177|gb|EFJ23803.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 312
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQ 136
I GHP Y++LL AH++C ++ D ++D +L R R+ + + + D ELDQ
Sbjct: 74 ISGHPQYKELLRAHMNCYKVGASADLAAQMD-ELVRKRE----FESAVKTSIGVDPELDQ 128
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDED 196
FM Y +L +++ +L++ + EA+ C E L S+ VS + S ++ED
Sbjct: 129 FMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVS---NIDVLSSAENED 180
Query: 197 QVDSDTNFFDGSLDGPDSMGFGP----LVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
++ +F ++ +S G G L P ++ ELK L + Y I +
Sbjct: 181 ASETYEDF----MEEAESGGIGEVDTDLDPLAGDK--------ELKKVLMKRYGGYIKGL 228
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYP 286
+E L+K++ GKLP ++ L WW H PYP
Sbjct: 229 TQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 262
>gi|20139943|sp|Q9M6D9.1|STM_BRAOL RecName: Full=Homeobox protein SHOOT MERISTEMLESS
gi|7340350|gb|AAF23753.2|AF193813_1 shoot meristemless [Brassica oleracea]
Length = 383
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGR 127
++ KA+I+ HP Y +LL A+V+C ++ P P++ A+L + A +A G
Sbjct: 120 SLLVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 175
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP---GE 184
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP G
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSLGY 231
Query: 185 STGATMSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
A +++ E++VD + F D P +R ELK +L
Sbjct: 232 GEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQL 268
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 269 LRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 314
>gi|356567654|ref|XP_003552032.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 2
[Glycine max]
Length = 324
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P +L + ++ R DV + V + V D E
Sbjct: 85 KAKIASHPHYPRLLQAYIECQKVGAP-PELTCLLEEIRRENDVRQR-DVVVSTCVGADPE 142
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E L L S+ T+ DD
Sbjct: 143 LDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDLCS----RSSLPTLYDD 194
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V S+ F G D D + ELK L + + + ++
Sbjct: 195 G--GVSSEEGFSAGDGDPQDGQ--------------LRSEDRELKDRLLRRFGSHVGSLK 238
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP D L WW H KWPYPT
Sbjct: 239 LEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPT 272
>gi|380746841|gb|AFE48351.1| KNOTTED-like 1-1 homeodomain protein [Cuscuta pentagona]
Length = 390
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 41/233 (17%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+IV HP Y LL A + C ++ P P++ A+L+ +R + G +
Sbjct: 101 EVDPVKAKIVSHPHYFNLLEAFIDCQKVGAP----PEVVARLTTARQEAEGKQRASFGSI 156
Query: 129 --LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLT 178
D ELDQFM Y L +E+L++ AME + + C + L+S+
Sbjct: 157 DFSKDPELDQFMGAYCETLVKCREELERPF-AEAMEFMRRIESQLNLLC---DAPLRSIF 212
Query: 179 GVSPGES--TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE 236
E G S++D+D + D + P +R E
Sbjct: 213 NSEGDEKYCEGVGSSEEDQDNSGGEAEVRD-------------MDPRAQDR--------E 251
Query: 237 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
LK+ L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+ S
Sbjct: 252 LKNHLLRKYSGYLSGLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSES 304
>gi|115470439|ref|NP_001058818.1| Os07g0129700 [Oryza sativa Japonica Group]
gi|75099746|sp|O80416.1|KNOSC_ORYSJ RecName: Full=Homeobox protein knotted-1-like 12; AltName:
Full=Homeobox protein HOS3; AltName: Full=Homeobox
protein OSH15; AltName: Full=Homeobox protein
knotted-1-like 3; Short=Oskn3
gi|221272020|sp|O65034.2|KNOSC_ORYSI RecName: Full=Homeobox protein knotted-1-like 12; AltName:
Full=Homeobox protein HOS3; AltName: Full=Homeobox
protein OSH15; AltName: Full=Homeobox protein
knotted-1-like 3; Short=Oskn3
gi|3327240|dbj|BAA31688.1| OSH15 [Oryza sativa Japonica Group]
gi|34395067|dbj|BAC84729.1| homeobox gene [Oryza sativa Japonica Group]
gi|113610354|dbj|BAF20732.1| Os07g0129700 [Oryza sativa Japonica Group]
gi|218199032|gb|EEC81459.1| hypothetical protein OsI_24763 [Oryza sativa Indica Group]
gi|222636372|gb|EEE66504.1| hypothetical protein OsJ_22961 [Oryza sativa Japonica Group]
gi|284431778|gb|ADB84630.1| homeobox protein [Oryza sativa Japonica Group]
Length = 355
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L ++E+L + + AME + ++ S
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSAR 198
Query: 188 ATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
++D + V S + D G + P P + +E ELK +L + Y
Sbjct: 199 LLLADGKSECVGSSEDDMDPSGRENEP------PEIDPRAEDK-------ELKFQLLKKY 245
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 246 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>gi|4887608|dbj|BAA77817.1| HOS3 [Oryza sativa Japonica Group]
Length = 355
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L ++E+L + + AME + ++ S
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSAR 198
Query: 188 ATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
++D + V S + D G + P P + +E ELK +L + Y
Sbjct: 199 LLLADGKSECVGSSEDDMDPSGRENEP------PEIDPRAEDK-------ELKFQLLKKY 245
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 246 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>gi|307335624|gb|ADN43389.1| KNOX2 [Agave tequilana]
Length = 291
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 64 RAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV 123
RAE + + KA I HP Y LL A++ C ++ P + +D S + V+ K +A
Sbjct: 28 RAE-YSEEELKARIASHPRYPLLLQAYIDCQKVGAPPEIACLLDEITSSNGAVVNKRTAA 86
Query: 124 A--NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-- 179
A +GR D ELD FM Y +L ++ L + + EA +E L L+
Sbjct: 87 AAFSGRFGSDPELDDFMERYCDVLMKYRSDLARSID----EATHFLNTIETQLSDLSNNK 142
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKH 239
P + + D+ + GS D S G TE + ++ +LK
Sbjct: 143 PPPPSRRSSPLISSLLDEAAA------GSSDEEVSGG-----ETEVQEFHLKGESGDLKE 191
Query: 240 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L + Y + ++ E +K++ GKLP + +L WW +H KWPYPT
Sbjct: 192 KLLRKYSGYLSSLKREFSKKKKKGKLPKEARQMLLEWWTAHYKWPYPT 239
>gi|225456981|ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
gi|297733756|emb|CBI15003.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR--DVLAKYSAVANGRVLDD 131
+A+I HPLY +LL A++ C ++ P P++ L R L + +AV+ + D
Sbjct: 81 RAKIATHPLYPKLLHAYIECQKVGAP----PEVAYLLEEIRRGSELCRRNAVSTC-LGAD 135
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +K L + EA ++E L +L GA+ S
Sbjct: 136 PELDEFMETYCDILVKYKSDLARPFD----EATAFLNNIETQLNTLC-------NGASRS 184
Query: 192 D-DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
DE S+ + G + E + L ELK +L + Y I
Sbjct: 185 YVSDEAAGSSEEDLSGGEV--------------EVQECLQTTENQELKDKLLRKYSGYIS 230
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E + ++ GKLP + L WW H KWPYPT
Sbjct: 231 TLKHEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPT 267
>gi|356506915|ref|XP_003522219.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 2
[Glycine max]
Length = 353
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP Y LL ++ C ++ P P++ A+ + ++ + S V +
Sbjct: 97 ELEAIKAKIIDHPHYSNLLQVYMDCQKVGAP----PEVAARFATVKENFEARQRSLVRSM 152
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ELDQFM Y +L ++E+L + + EA +E L +L + E+
Sbjct: 153 ETCKDPELDQFMEAYYDMLVKYREELTRPIE----EAKDFMQRIESQLNTLCNGT-WENI 207
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G++ S++D+D +T + + P +R ELK L + Y
Sbjct: 208 GSS-SEEDKDNSGRETELIE-------------IDPQAEDR--------ELKSHLLKKYS 245
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 246 GYLGTLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 288
>gi|55669505|gb|AAV54620.1| homeobox transcription factor KN3 [Pinus taeda]
Length = 470
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I+ H Y +L++A++ C ++ P P++ +L V V D E
Sbjct: 210 RAKIIAHVHYPRLVAAYIDCQKVGAP----PEVVLELDDLSHKCQTQHCVPTISVGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LDQFM Y + ++E+L + + EA+ +E L +LT + T T S D
Sbjct: 266 LDQFMEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGTLT-----KGTIRTSSLD 316
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH----ELKHELKQGYKEKI 249
D+ DG+ + G G E E H ELK +L + Y +
Sbjct: 317 QGDERG------DGAASSEEEDGSG------GEVEFHEVDPHAEDRELKDQLLRKYSGYL 364
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E L+K++ GKLP + L WW + KWPYP+ S+
Sbjct: 365 SSLKQEFLKKKKKGKLPKEARQKLLDWWTRNYKWPYPSESQ 405
>gi|345649237|gb|AEO14149.1| KNAT1 protein [Eschscholzia californica subsp. californica]
Length = 405
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRD--VLAKYSAVANGRVL-- 129
KA+I+ HP Y LL A++ C ++ P P++ + L+++R V + S+V G L
Sbjct: 144 KAKIIAHPQYFNLLDAYMDCQKVGAP----PEVVSWLTQARQEFVERQKSSVNCGDKLVS 199
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP------G 183
D ELDQFM Y +L ++E+L + ++ EA+ +E L +L P
Sbjct: 200 ADPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMRKIEAQLNTLCINGPIRVFTDE 255
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+ GA S++D++ +T + + P +R ELK+ L +
Sbjct: 256 KCEGAGSSEEDQENSAGETELPE-------------IDPRAEDR--------ELKNHLLK 294
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP D L WW H KWPYP+
Sbjct: 295 KYSGYLSSLKKELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 338
>gi|356567652|ref|XP_003552031.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 1
[Glycine max]
Length = 320
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 92/216 (42%), Gaps = 34/216 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P +L + ++ R DV + V + V D E
Sbjct: 85 KAKIASHPHYPRLLQAYIECQKVGAP-PELTCLLEEIRRENDVRQR-DVVVSTCVGADPE 142
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT--GVSPGESTGATMS 191
LD+FM Y +L +K L + EA +E L L GVS + G S
Sbjct: 143 LDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDLCSRGVS---NDGGVSS 195
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
++ D D DG L D ELK L + + +
Sbjct: 196 EEGFSAGDGDPQ--DGQLRSED---------------------RELKDRLLRRFGSHVGS 232
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP D L WW H KWPYPT
Sbjct: 233 LKLEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPT 268
>gi|303283021|ref|XP_003060802.1| knox-like protein [Micromonas pusilla CCMP1545]
gi|226458273|gb|EEH55571.1| knox-like protein [Micromonas pusilla CCMP1545]
Length = 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L+ LK+ Y I +R+E LRKR+ GKLP D T LK WW + WPYP+
Sbjct: 220 DLRKSLKRKYATSISSLRDEFLRKRKKGKLPTDATEALKKWWSDNVVWPYPS 271
>gi|1814234|gb|AAB41849.1| POTH1 [Solanum tuberosum]
Length = 345
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQLSRSRDVLAKYSAVANGRVLD 130
KA+IV HP Y +LL+A++ C ++ P V+ L +I Q + +++ G
Sbjct: 117 KAKIVSHPYYPKLLNAYIDCQKVGAPAGIVNLLEEIRQQTDFRK---PNATSICIGA--- 170
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELD+FM Y +L +K L + EA +E L +L
Sbjct: 171 DPELDEFMETYCDILLKYKSDLSRPFD----EATTFLNKIEMQLGNLCK----------- 215
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
D+ V SD G D M +ELK L + + +
Sbjct: 216 ---DDGGVSSDEELSCGEADAS-----------------MRSEDNELKDRLLRKFGSHLS 255
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
++ E +K++ GKLP + +L AWW H +WPYPT + NS
Sbjct: 256 SLKLEFSKKKKKGKLPKEARQMLLAWWDDHFRWPYPTEADKNS 298
>gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
Length = 326
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLR--IATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
KA+I HP Y +LL A++ C + + P ++ + ++ R DV K V + D
Sbjct: 83 KAKIACHPSYPRLLQAYIDCQKKQVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGAD 140
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGA 188
ELD+FM Y +L +K L + EA +E L++L TGV + G S
Sbjct: 141 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDG 196
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+S D+E L G D V + + +R +LK L + + +
Sbjct: 197 VISSDEE-------------LSGGDHE-----VAEDGRQRCEDR---DLKDRLLRKFGSR 235
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 236 ISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 274
>gi|145336056|ref|NP_173752.3| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
gi|332192259|gb|AEE30380.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
Length = 329
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLR--IATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
KA+I HP Y +LL A++ C + + P ++ + ++ R DV K V + D
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKKQVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGAD 143
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGA 188
ELD+FM Y +L +K L + EA +E L++L TGV + G S
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDG 199
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+S D+E L G D V + + +R +LK L + + +
Sbjct: 200 VISSDEE-------------LSGGDHE-----VAEDGRQRCEDR---DLKDRLLRKFGSR 238
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 ISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 277
>gi|55669507|gb|AAV54621.1| homeobox transcription factor KN4 [Picea mariana]
Length = 438
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LDQFM Y +L + +L + + EA +E L L S GA S
Sbjct: 245 LDQFMEAYCQMLIKYHLELSKPFK----EARTFLNKMETQLNCL-------SKGAIRS-- 291
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE---------LKHELKQG 244
+ + D DG S +E E S E HE LK +L +
Sbjct: 292 ------FPSGYCDEREDGGGS--------SEEEFSCGEIEVHEVDPRAEDRELKDQLLRK 337
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y +++E L+K++ GKLP + L WW H KWPYP+
Sbjct: 338 YSGYFSSLKQEFLKKKKKGKLPKEARQKLLEWWNVHYKWPYPS 380
>gi|302791345|ref|XP_002977439.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
gi|300154809|gb|EFJ21443.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
Length = 307
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQ 136
I GHP Y++LL AH++C ++ D ++D +L R R+ + + + D ELDQ
Sbjct: 63 ISGHPQYKELLRAHMNCYKVGASADLAAQMD-ELVRKRE----FESAVKTSIGVDPELDQ 117
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDED 196
FM Y +L +++ +L++ + EA+ C E L + ++ + E+
Sbjct: 118 FMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQLSVIARKIIIIASSGSSRSSAEN 173
Query: 197 QVDSDTNFFDGSLDGPDSMGFGP----LVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
+ S+T ++ ++ +S G G L P ++ ELK L + Y I +
Sbjct: 174 EDASET--YEDFMEEAESGGIGEVDTDLDPLAGDK--------ELKKVLMKRYGGYIKGL 223
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYP 286
+E L+K++ GKLP ++ L WW H PYP
Sbjct: 224 TQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 257
>gi|224121810|ref|XP_002318678.1| predicted protein [Populus trichocarpa]
gi|222859351|gb|EEE96898.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 14/223 (6%)
Query: 69 ETVKC--KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
E V C +A+I HPLY +LL A++ C ++ P + +D ++ DV +
Sbjct: 5 EEVSCAIRAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLD-EIRLVNDVSKGSNDTVAS 63
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-GVSPGES 185
+ D ELD+FM Y +L +K L + EA D+E +L G S +
Sbjct: 64 CLGADPELDEFMETYCDVLMKYKADLSRPFD----EATTFLNDIEAQFNTLCNGPSRSQV 119
Query: 186 TGATMSDDDEDQVDSDT-NFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G +S + S N GS D S G + +S R +R ELK +L +
Sbjct: 120 YGLPLSLSLSILLLSMLSNEAAGSSDEDASGGEAGM--QDSTRINEDR---ELKDKLLRK 174
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y I ++ ++++ GKLP + +L WW H KWPYPT
Sbjct: 175 YSGYISTLKHAFSKQKKKGKLPKEARQILLNWWNIHNKWPYPT 217
>gi|60476412|gb|AAX21345.1| homeobox knotted-1-like protein KNOX1 [Lotus japonicus]
Length = 181
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 85 QLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLL 144
+LL+A+VSC ++ P + + +++ + + AV +G + +D LDQFM Y +
Sbjct: 2 RLLAAYVSCQKVGAPPEVVARLEEACGSAVGMAG--DAVGSGSIGEDPALDQFMEAYCEM 59
Query: 145 LYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT-----GVSPGESTGATMSDDDEDQVD 199
L ++++L + ++ EA++ +E ++LT G + G SD+D D
Sbjct: 60 LTKYEQELSKPLK----EAMLFLQRIEFQFKNLTASSDVGCNEGTERNTGSSDEDADLY- 114
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
N D P +R ELK +L + Y + ++E ++K
Sbjct: 115 ---NMID---------------PQAEDR--------ELKGQLLRKYSGYLGSSKQEFMKK 148
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
R+ GKLP + WW H KWPYP R
Sbjct: 149 RKKGKLPKEARQQFLEWWSRHYKWPYPNRCR 179
>gi|297722585|ref|NP_001173656.1| Os03g0772100 [Oryza sativa Japonica Group]
gi|108711301|gb|ABF99096.1| KNOX1 domain containing protein [Oryza sativa Japonica Group]
gi|255674932|dbj|BAH92384.1| Os03g0772100 [Oryza sativa Japonica Group]
Length = 385
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 97/242 (40%), Gaps = 54/242 (22%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA------QLSRSRDVLAKYSAVANGR 127
KAEI+ HP Y LL+A++ C ++ P D L K+ A QL + +
Sbjct: 82 KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDD 141
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
+ D +LDQF +HA E +Q G + S G
Sbjct: 142 DVPDHQLDQF--------------------MHADE-----------VQGGAGAADPGSRG 170
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
D DS+ S + D+ + E ++ +LKH+L Y
Sbjct: 171 VLQLDSI---ADSNCEGTGSSEEEQDT--------SCPEAEEIDPSDKQLKHQLLMKYGG 219
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPTVSRTNSCIAISLFNS---I 303
+ D+R+ ++ + GKLP + L WW L + KWPYP+V RT+ A L NS
Sbjct: 220 SLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSV-RTH-IYASHLINSTTFF 277
Query: 304 CT 305
CT
Sbjct: 278 CT 279
>gi|2935575|gb|AAC32818.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 357
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 49/236 (20%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 86 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 138
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-------- 179
D ELDQFM Y +L ++E+L + + EA+ +E L ++ G
Sbjct: 139 DARDPELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIAGGGHGGSGG 194
Query: 180 --------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
++ G+S S+DD D G + P P + +E
Sbjct: 195 GAGSARLLLADGKSECVGSSEDDMDP--------SGRENEP------PEIDPRAEDK--- 237
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK +L + Y + +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 238 ----ELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 289
>gi|169160088|gb|ACA49545.1| class 1 KNOX protein, partial [Corytoplectus speciosus]
Length = 245
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 37/209 (17%)
Query: 89 AHVSCLRIATPVDQLPKIDAQLSRSR-DVLAKYSAVANGR-VLDDKELDQFMTHYVLLLY 146
A++ C R+ P P++ A+L+ R + ++ A + GR V D ELDQFM Y +L
Sbjct: 1 AYLDCQRVGAP----PEVVARLTAIRQEFESRQRAESAGRDVSKDPELDQFMEAYCEMLV 56
Query: 147 SFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG------VSPGESTGATMSDDDEDQVDS 200
++E+L + ++ AME + +E L +T S + G S++D+D
Sbjct: 57 KYREELTRPLQ-EAMEFMRR---IETQLNMITNGPVRIFTSEEKCEGVGSSEEDQDNSGG 112
Query: 201 DTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKR 260
+T D + P +R ELK+ L + Y + +++E+ +K+
Sbjct: 113 ETELPD-------------IDPRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKK 151
Query: 261 RAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ GKLP D L +WW H KWPYP+ S
Sbjct: 152 KKGKLPKDARQKLLSWWELHYKWPYPSES 180
>gi|3327269|dbj|BAA31698.1| PKn1 [Ipomoea nil]
Length = 333
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P + +D ++ R D+ S V+ DD E
Sbjct: 101 KAKIASHPSYPKLLEAYIDCQKVGAPPEIASFLD-EIRRENDLFKHDSRVSTC-FGDDPE 158
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FM Y +L +K L + EA +E L +L S+
Sbjct: 159 LDIFMETYCDILVKYKSDLSRPFD----EAKTFLNKIETQLSNLCKDDGVVSSDDDEYSG 214
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
E E + S ++ ELK L Q Y I ++
Sbjct: 215 GE---------------------------AEEQDSAVKGEDRELKSRLLQKYGGHISSLK 247
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP D +L WW H +WPYPT
Sbjct: 248 LEFSKKKKKGKLPKDARQILLEWWKGHYRWPYPT 281
>gi|58011287|gb|AAW62518.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 315
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ KA I GHP Y +L+ AH+S ++ ++ +I+ + +D ++ S+V + + +
Sbjct: 68 EMKAAISGHPQYLELIKAHMSIKKVGASSQKVAEINEVIRMHQD--SQPSSV-HTNIGAN 124
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELDQFM Y +L ++ QL + A+ C +Q Q L VS + +S
Sbjct: 125 PELDQFMVAYCDVLNMYENQLNKAF----TGAIEYC---KQQEQELKLVSVSDEPIDALS 177
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+ D D + D PL+ + E+K L + Y +
Sbjct: 178 SVELDDDVEDDEEAESDDVAADGGDIDPLIGDK-----------EIKRALMKKYGGYLGG 226
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAIS 298
+ +E L+K++ KLP T L+ WW H + PYP+ ++ + A +
Sbjct: 227 LTQEYLKKKKKSKLPSAATKTLRDWWFQHLEHPYPSEAQKATLAATT 273
>gi|302786492|ref|XP_002975017.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
gi|300157176|gb|EFJ23802.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
Length = 336
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 41/232 (17%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQ 136
I GHP Y++LL AH++C ++ D ++D +L R R+ + + + D ELDQ
Sbjct: 74 ISGHPQYKELLRAHMNCYKVGASADLAAQMD-ELVRKRE----FESAVKTSIGVDPELDQ 128
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDED 196
FM Y +L +++ +L++ + EA+ C E L S+ VS + +S E
Sbjct: 129 FMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVSNID----VLSSGRET 179
Query: 197 QVDSDTNFFDGSLDGPDSMGFGPLVP-----TESERSLMERVR----------------- 234
QV + F+ PD F +E+ ME
Sbjct: 180 QVPCNAKVFN-----PDEQIFTETGAENEDASETYEDFMEEAESGGIGEVDTDLDPLAGD 234
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYP 286
ELK L + Y I + +E L+K++ GKLP ++ L WW H PYP
Sbjct: 235 KELKKVLMKRYGGYIKGLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 286
>gi|127709419|gb|ABO28750.1| knotted1-like homeobox transcription factor [Prunus persica]
gi|289655992|gb|ADD14044.1| class 1 KNOTTED-like transcription factor KNOPE2 [Prunus persica]
Length = 351
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I HP Y +L+ A++ C ++ P + +D ++ R D Y G
Sbjct: 97 KAKIASHPTYPRLIHAYIECQKVGAPPEIASFLD-EIRRESD-FYNYKQQQRGSCNSNSS 154
Query: 131 --------DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
D ELD+FM Y +L +K L + EA +E L +L S
Sbjct: 155 MSSTYLGADPELDEFMETYCEMLVKYKSDLSRPFD----EATTFLNKIELQLSNLCTSSA 210
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
S+ T+SD E SD +F G ++ + G +R L +R L
Sbjct: 211 NASSIRTLSD--EGGASSDEDFSGGEIEVQEGQQRG------DDRDLKDR--------LM 254
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 255 RRFGSHIGTLKLEFSKKKKKGKLPKEARQTLFDWWSVHYKWPYPT 299
>gi|147810349|emb|CAN60889.1| hypothetical protein VITISV_041259 [Vitis vinifera]
Length = 328
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR--DVLAKYSAVANGRVLDD 131
+A+I HPLY +LL A++ C ++ P P++ L R L + AV+ + D
Sbjct: 81 RAKIATHPLYPKLLHAYIECQKVGAP----PEVAYLLEEIRRGSELCRRXAVSTC-LGAD 135
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE-STGATM 190
ELD+FM Y +L +K L + A + M + + L + V P S T
Sbjct: 136 PELDEFMETYCDILVKYKSDLARPFD-EATASYMIAYK-KHDLLAHVKVKPAHVSREKTH 193
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
++E S+ + G + E + L ELK +L + Y I
Sbjct: 194 MKNNEAAGSSEEDLSGGEV--------------EVQECLQTTENQELKDKLLRKYSGYIS 239
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E + ++ GKLP + L WW H KWPYPT
Sbjct: 240 TLKHEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPT 276
>gi|356506913|ref|XP_003522218.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 1
[Glycine max]
Length = 361
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 33/227 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANG 126
E KA+I+ HP Y LL ++ C ++ P P++ A+ + ++ + S V +
Sbjct: 97 ELEAIKAKIIDHPHYSNLLQVYMDCQKVGAP----PEVAARFATVKENFEARQRSLVRSM 152
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ELDQFM Y +L ++E+L + + EA +E L +L T
Sbjct: 153 ETCKDPELDQFMEAYYDMLVKYREELTRPIE----EAKDFMQRIESQLNTLCN-----GT 203
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMG----FGPLVPTESERSLMERVRHELKHELK 242
SDD + + S S + D+ G + P +R ELK L
Sbjct: 204 VRIFSDDKWENIGS------SSEEDKDNSGRETELIEIDPQAEDR--------ELKSHLL 249
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
+ Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 250 KKYSGYLGTLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 296
>gi|414872579|tpg|DAA51136.1| TPA: knotted homeobox3 [Zea mays]
Length = 193
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 56 NSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRD 115
+S + GRA D + VK K IV HP Y +LL+A + C ++ P + + A ++R R+
Sbjct: 60 SSVAGHGGRAADLDPVKAK--IVSHPSYHRLLAAFLDCHKVGCPPEAA-EEIAAVARERE 116
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+ +A D ELDQFM Y LL ++KE+L + +R EA +E L
Sbjct: 117 AWQRAAAGDVAHTRPDPELDQFMESYCELLVTWKEELTRPLR----EAEEFLTTVEAQLN 172
Query: 176 SLTGVSPGESTGATMS 191
S+T P + GA +S
Sbjct: 173 SITNTGP--TMGAFIS 186
>gi|357493287|ref|XP_003616932.1| Homeobox protein [Medicago truncatula]
gi|132424661|gb|ABO33483.1| class I KNOX homeobox transcription factor [Medicago truncatula]
gi|355518267|gb|AES99890.1| Homeobox protein [Medicago truncatula]
Length = 312
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR--DVLAKYSAVANGRVLD 130
C+ +I+ HPL+ +LLS++++CL++ P + + ++ ++ + + + ++ + +
Sbjct: 60 CRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCEILNGSSGRTGSSSSCIGE 119
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D LDQFM Y +L ++++L + + EA++ +E L++ V+ G +
Sbjct: 120 DPGLDQFMEAYCEMLIKYEQELTKPFK----EAMLFLSRIESQLKA---VAVSTDFGQSE 172
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
++++D N D + G D ELK +L + Y +
Sbjct: 173 FAASQNEIDVHENNLDTT-QGED---------------------QELKVQLLRKYSGYLG 210
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
+++E L+K++ GKLP + L WW H KWPYP+ S+ +
Sbjct: 211 SLKKEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQA 253
>gi|449516639|ref|XP_004165354.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
6-like [Cucumis sativus]
Length = 324
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 61 DNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKY 120
D R ED V KA+I HP Y +LL A++ C ++ P ++ + + + D+ ++
Sbjct: 71 DIQREEDMVNV-IKAKISSHPTYPRLLDAYIDCQKVGAP-PEIAHLLEGIRQESDLCNRH 128
Query: 121 SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV 180
+ V D ELD+FM Y +L +K L++ EA +E L +L
Sbjct: 129 AVTTCLGV--DPELDEFMETYCDMLVKYKSDLKRPFD----EATTFLNKIELQLSNLCNG 182
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
+ S +SDD G++ + + G + E+E R +LK +
Sbjct: 183 AFSRS----LSDD-------------GAVSSDEELSGGEMEVVEAEAQTKGENR-DLKDK 224
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + + I ++ E + ++ GKLP + L WW H KWPYPT
Sbjct: 225 LLRRFGSHISTLKLEFSKXKKKGKLPKEARQTLFEWWNVHYKWPYPT 271
>gi|449435396|ref|XP_004135481.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
Length = 316
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 26/227 (11%)
Query: 61 DNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKY 120
D R ED V KA+I HP Y +LL A++ C ++ P ++ + + + D+ ++
Sbjct: 71 DIQREEDMVNV-IKAKISSHPTYPRLLDAYIDCQKVGAP-PEIAHLLEGIRQESDLCNRH 128
Query: 121 SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV 180
+ V D ELD+FM Y +L +K L++ EA +E L +L
Sbjct: 129 AVTTCLGV--DPELDEFMETYCDMLVKYKSDLKRPFD----EATTFLNKIELQLSNLCNG 182
Query: 181 SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHE 240
+ S +SDD G++ + + G + E+E R +LK +
Sbjct: 183 AFSRS----LSDD-------------GAVSSDEELSGGEMEVVEAEAQTKGENR-DLKDK 224
Query: 241 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L + + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 225 LLRRFGSHISTLKLEFSKKKKKGKLPKEARQTLFEWWNVHYKWPYPT 271
>gi|297850804|ref|XP_002893283.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
lyrata]
gi|297339125|gb|EFH69542.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLR--IATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
K +I HP Y +LL A++ C + + P ++ + ++ R DV K V + D
Sbjct: 86 KTKIACHPSYPRLLQAYIDCQKKQVGAP-PEIACLLEEIQRESDVY-KQEVVPSYCFGAD 143
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGA 188
ELD+FM Y +L +K L + EA +E L++L TGV + G S
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDG 199
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+S D+E L G D + + ++ +R +LK L + + +
Sbjct: 200 AISSDEE-------------LSGGDHE-----LAEDGKQRCEDR---DLKDRLLRKFGSR 238
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 ISSLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 277
>gi|290782316|gb|ADD62366.1| KNOX6 variant a [Medicago truncatula]
Length = 298
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR--DVLAKYSAVANGRVLD 130
C+ +I+ HPL+ +LLS++++CL++ P + + ++ ++ + + + ++ + +
Sbjct: 46 CRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCEILNGSSGRTGSSSSCIGE 105
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D LDQFM Y +L ++++L + + EA++ +E L++ V+ G +
Sbjct: 106 DPGLDQFMEAYCEMLIKYEQELTKPFK----EAMLFLSRIESQLKA---VAVSTDFGQSE 158
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
++++D N D + G D ELK +L + Y +
Sbjct: 159 FAASQNEIDVHENNLDTT-QGED---------------------QELKVQLLRKYSGYLG 196
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
+++E L+K++ GKLP + L WW H KWPYP+ S+ +
Sbjct: 197 SLKKEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQA 239
>gi|221272024|sp|Q10EC6.2|KNOS9_ORYSJ RecName: Full=Homeobox protein knotted-1-like 9
gi|222625876|gb|EEE60008.1| hypothetical protein OsJ_12750 [Oryza sativa Japonica Group]
Length = 347
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 55/224 (24%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA------QLSRSRDVLAKYSAVANGR 127
KAEI+ HP Y LL+A++ C ++ P D L K+ A QL + +
Sbjct: 82 KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDD 141
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAME---AVMACWDLEQSLQSLTGVSPGE 184
+ D +LDQF +HA E A + + L ++
Sbjct: 142 DVPDHQLDQF--------------------MHADEVQGGAGAADPGSRGVLQLDSIADSN 181
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G S++++D + D S +LKH+L
Sbjct: 182 CEGTGSSEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMK 216
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPT 287
Y + D+R+ ++ + GKLP + L WW L + KWPYP+
Sbjct: 217 YGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPS 260
>gi|117644098|emb|CAL49293.1| shoot meristemless ortholog 2 [Silene latifolia]
Length = 276
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 50/233 (21%)
Query: 76 EIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQLSRSRDVLAKYSAVANGR---VL 129
+I+ HP Y +LLSA V+C ++ P V +L + +A ++ S+ + + + G+ +
Sbjct: 1 KIMAHPHYPRLLSAFVNCQKVGAPAEVVARLEEAEAAMTVSQGSRSGSGSGSGGQGYIIG 60
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT----------G 179
+ LDQFM Y +L ++++L + + EA++ +E ++LT G
Sbjct: 61 EXPALDQFMEAYSEMLTKYEQELTKPFK----EAMLFLSRIESQFKTLTLSSSSDSPSSG 116
Query: 180 VSP--GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHEL 237
+ GE G++ E+ +D + N D P +R EL
Sbjct: 117 ICGDIGERNGSS-----EEDIDVNNNLID---------------PCVEDR--------EL 148
Query: 238 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
K +L + Y + +R+E L+KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 149 KGQLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 201
>gi|20530671|gb|AAM27189.1|AF457120_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
Length = 156
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V D E
Sbjct: 54 KAQIAGHPRYPSLLSAYIECRKVGAP-PEVATLLEEIGRERCA----AASAGGEVGLDPE 108
Query: 134 LDQFMTHYVLLLYSFKEQLQQ 154
LD+FM Y +L +KE+L +
Sbjct: 109 LDEFMEAYCRVLERYKEELSR 129
>gi|336112107|gb|AEI17372.1| Knox-like protein 1 [Arabidopsis lyrata]
Length = 388
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 55/293 (18%)
Query: 12 LVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPK--------------NNKNNS 57
++ P S+ P T N R H Q N+++ + EA N + +
Sbjct: 59 MLFPHMSSLLPQNT--ENCFRSDHDQPNNNNPSVKSEASSSRINHYSMLMRAIHNTQEAN 116
Query: 58 ASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRD 115
+ +N D E +K K I+ HP Y LL A++ C +I P + + +I A Q +R
Sbjct: 117 NNTNNDNVSDVEAMKAK--IIAHPHYSTLLQAYLDCQKIGAPPEVVDRITAARQDFEARQ 174
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAME--------AVMAC 167
S A+ R D ELDQFM Y +L ++E+L + ++ AME +M C
Sbjct: 175 QRPTPSVSASSR---DPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLIMLC 230
Query: 168 WDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESER 227
+ + L + G+S G SD++++ N G + P+ + P +R
Sbjct: 231 ---QSPIHILNNPADGKSEGMGSSDEEQE------NTSGGETELPE------IDPRAEDR 275
Query: 228 SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSH 280
ELK+ L + Y + +++E+ +K++ GKLP + L WW H
Sbjct: 276 --------ELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELH 320
>gi|30348869|gb|AAP31411.1|AF457122_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
Length = 150
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD-DK 132
KA+I GHP Y LLSA++ C ++ P ++ + ++ R R +A A G V+ D
Sbjct: 47 KAQIAGHPRYPSLLSAYIDCRKVGAP-SEVATLLEEIGRERCA----AASAGGEVVGMDP 101
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELD+FM Y LL +KE+L +
Sbjct: 102 ELDEFMETYCRLLERYKEELSR 123
>gi|73918027|gb|AAZ93630.1| transcription factor Knat6 [Eschscholzia californica]
Length = 228
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 86 LLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLL 145
LL A++ C ++ P++ +D R + +K + V+ + DD ELD FM Y +L
Sbjct: 3 LLQAYIDCQKVGAPMEIACLLDE--IRQENDTSKRTVVSTTCLGDDPELDNFMETYCDIL 60
Query: 146 YSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFF 205
+K L + EA ++ L +L + ++ S + D++ +
Sbjct: 61 VRYKSDLSRPFN----EATTFLNKIQMQLSNLCNNKSSSNRISSASAANSDEIVGSSE-- 114
Query: 206 DGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKL 265
D + G + E + L +R E+K +L + Y I +++E +K++ GKL
Sbjct: 115 -------DDLSGGEIEVQEVQPRLEDR---EMKDKLLRKYSGYISSLKQEFSKKKKKGKL 164
Query: 266 PGDTTSLLKAWWLSHAKWPYPT 287
P D +L WW H KWPYPT
Sbjct: 165 PKDARQILFDWWNVHNKWPYPT 186
>gi|357115636|ref|XP_003559594.1| PREDICTED: homeobox protein knotted-1-like 4-like [Brachypodium
distachyon]
Length = 313
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 51/248 (20%)
Query: 49 APKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
AP S +++ R+ D KA+I+ HPLY LL + + C ++ P
Sbjct: 32 APAPGSEPSTRSNHERSTD----TIKAKIMSHPLYPALLRSFIECQKVGAP--------- 78
Query: 109 QLSRSRDVLAKYSAVANGRVLD---------DKELDQFMTHYVLLLYSFKEQLQQHVRVH 159
++V+ + A+A D D ELD+FM Y +L +K++L + ++
Sbjct: 79 -----QEVVGRLCALAGELESDCGDQRQDSLDAELDEFMETYCHVLVRYKQELTRPIQ-- 131
Query: 160 AMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGP 219
EA D+E + S T S+DDE + G DG
Sbjct: 132 --EADQFFRDIEAQMDSFTLDDNSGGGDDGSSEDDEQEA--------GHADG-------- 173
Query: 220 LVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLS 279
+P + + + +ELK L Y + + ++ +K++ GKLP D L WW
Sbjct: 174 -LPEITSQCAED---NELKSHLLSKYSGYLTSLWRDLSKKKKKGKLPRDARQKLLHWWQL 229
Query: 280 HAKWPYPT 287
H +WPYP+
Sbjct: 230 HYRWPYPS 237
>gi|161105475|gb|ABR26245.2| transcription factor STM1 [Euphorbia esula]
Length = 217
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HP Y +LL+A+++C ++ P P+I A+L + A +
Sbjct: 117 TASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGPSGTSCLG 172
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
+D LDQFM Y +L ++++L + + EA++ +E ++LT
Sbjct: 173 EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALT 217
>gi|63168778|gb|AAY34562.1| shoot meristemless-like protein [Eschscholzia californica subsp.
californica]
Length = 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 35/199 (17%)
Query: 95 RIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
R+ P + + K++ + + + + +A+ + G + +D LDQFM Y +L ++++L +
Sbjct: 3 RVGAPPEVVAKLE-EANATGEAMAR-TGSGTGCIGEDPALDQFMEAYCEMLTKYQQELTK 60
Query: 155 HVRVHAMEAVMACWDLEQSLQSLTGVS---PGESTGATMSDDDEDQVDSDTNFFDGSLDG 211
EA+M +E ++LT VS GE+ S D++ +D++ N+ D
Sbjct: 61 PFE----EAMMFLSRIECQFKALT-VSDSVGGEAVNRNGSSDED--IDANDNYID----- 108
Query: 212 PDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 271
P +R ELK +L + Y + +++E L+KR+ GKLP +
Sbjct: 109 ----------PQAEDR--------ELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQ 150
Query: 272 LLKAWWLSHAKWPYPTVSR 290
L WW H KWPYP+ S+
Sbjct: 151 QLLDWWSRHYKWPYPSESQ 169
>gi|329757145|gb|AEC04752.1| knotted-like homeobox KNOX3 [Fragaria vesca]
Length = 360
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 30/229 (13%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
N NG ++++E ++ K +++ HPL+ +LL+++V+C ++ P + + +++ + S A
Sbjct: 82 NQNG-SQEYE-MRMKTKVMSHPLFPRLLASYVNCQKVGAPAEVVARLEDAAAASISSSAA 139
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
SA D ELDQFM Y +L + E+L + EA++ + L++L+
Sbjct: 140 LSAACE-ESEPDPELDQFMEAYCEMLTKYHEELTKPFH----EAMLGLSKINSQLKALS- 193
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH-ELK 238
VSP S + T G + G +E + R + +++
Sbjct: 194 VSPSYS--------------ASTGDLVGQGGSSEEAGV-------NENCIDPRAKDWDIR 232
Query: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L Q Y + + +E+ +K++ GKLP + L+ WW + WPYP+
Sbjct: 233 AKLLQKYGGSLGSLSQELKKKKKNGKLPKEARVQLQEWWSRNYTWPYPS 281
>gi|371767730|gb|AEX56220.1| knotted-like 2 protein [Gymnadenia odoratissima]
Length = 162
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ELK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 92 NELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 144
>gi|371767720|gb|AEX56215.1| knotted-like 3 protein [Gymnadenia conopsea]
Length = 142
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ELK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 72 NELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 124
>gi|371767692|gb|AEX56202.1| knotted-like 5 protein [Gymnadenia conopsea]
Length = 162
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ELK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 92 NELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 144
>gi|33333535|gb|AAQ11884.1| knotted 4 [Hordeum vulgare]
Length = 136
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH+L + Y + +R+E ++R+ GKLP + L WW H+KWPYP+
Sbjct: 25 ELKHQLLRKYGGYVGSLRQEFCKRRKKGKLPKEARQKLLHWWELHSKWPYPS 76
>gi|218193684|gb|EEC76111.1| hypothetical protein OsI_13373 [Oryza sativa Indica Group]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 104 PKIDAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAM 161
P++ A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ AM
Sbjct: 107 PEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREELTRPLQ-EAM 165
Query: 162 EAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLV 221
E + + + + S++G S + S++D++ +T + G D
Sbjct: 166 EFLRRV-ETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVD-------- 216
Query: 222 PTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHA 281
ELKH L + Y + +++E+ +K++ GKLP D L WW H
Sbjct: 217 -------------QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHY 263
Query: 282 KWPYPTV-SRTNSCIAISLFNSICTLNSYLVL 312
KWPYP+ S N+C +CT++S + +
Sbjct: 264 KWPYPSAYSTANTC-------DVCTVDSVISI 288
>gi|222625719|gb|EEE59851.1| hypothetical protein OsJ_12427 [Oryza sativa Japonica Group]
Length = 355
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 33/212 (15%)
Query: 104 PKIDAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAM 161
P++ A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ AM
Sbjct: 105 PEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREELTRPLQ-EAM 163
Query: 162 EAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLV 221
E + + + + S++G S + S++D++ +T + G D
Sbjct: 164 EFLRRV-ETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVD-------- 214
Query: 222 PTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHA 281
ELKH L + Y + +++E+ +K++ GKLP D L WW H
Sbjct: 215 -------------QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHY 261
Query: 282 KWPYPTV-SRTNSCIAISLFNSICTLNSYLVL 312
KWPYP+ S N+C +CT++S + +
Sbjct: 262 KWPYPSAYSTANTC-------DVCTVDSVISI 286
>gi|449450628|ref|XP_004143064.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
Length = 319
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL---D 130
KA+IV HP Y +LL A++ C ++ P P++ L R S NG
Sbjct: 79 KAKIVSHPTYPRLLHAYIDCQKVGAP----PEVACLLEEIRR--ENDSQEQNGISTCFGA 132
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELD+FM Y +L +K L + EA +++ L +L + +T
Sbjct: 133 DPELDEFMEAYCDMLVKYKSDLSRPFH----EAFSFLNNIQLQLCNLG------APASTS 182
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME-RVRHE---LKHELKQGYK 246
+ +ED + SD D + G ER L + ++R E LK L +
Sbjct: 183 TPSNEDAMSSD-----------DELNCG-------ERELQDGQMRLEDKGLKDMLLSRFG 224
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I ++ E +K++ GKLP + +L WW H KWPYPT
Sbjct: 225 GHIGTLKLEFSKKKKKGKLPKEGRKVLLEWWDVHYKWPYPT 265
>gi|302819516|ref|XP_002991428.1| hypothetical protein SELMODRAFT_448401 [Selaginella moellendorffii]
gi|300140821|gb|EFJ07540.1| hypothetical protein SELMODRAFT_448401 [Selaginella moellendorffii]
Length = 412
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 45/231 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA IV H Y LL++ ++ ++ P D++ K+D + +L V + E
Sbjct: 160 KASIVAHAHYPDLLASLLNIQKVGAPPDRVAKLD----EAGQLLLNLRPAVVTSVGANPE 215
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMA-CWDLEQSLQSLTGVSPGESTGATMSD 192
LD FM Y ++ F+++ + +E MA C L ++ S ++ T
Sbjct: 216 LDDFMVAYCAIMKEFEDEFRN-----VLEGAMAFCKTKTDQLGAIAAASVHMNSVVTSVS 270
Query: 193 DD----------------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE 236
D E + D ++ +D PL E+
Sbjct: 271 DHPVESEEPETTTTGGGAEIEEDISSSEVGNEVD--------PLAKDEN----------- 311
Query: 237 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LK L Q Y I +++E L+K++ GKLP +T L WW +H KWPYP+
Sbjct: 312 LKEYLAQRYGAYIKGLKQEFLKKKKKGKLPKHSTEKLYEWWEAHIKWPYPS 362
>gi|356499245|ref|XP_003518452.1| PREDICTED: homeobox protein SHOOT MERISTEMLESS-like [Glycine max]
Length = 261
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 50 PKNNKNNSASN------DNGRAED---------WETVKCKAEIVGHPLYEQLLSAHVSCL 94
P +N NNS N N A++ +T + +I+ HPL+ +LLS++++CL
Sbjct: 30 PLSNNNNSGDNRRVPVTSNSIAQEHHYSHHHNPTDTCSVRDKIMAHPLFPRLLSSYLNCL 89
Query: 95 RIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
++ P + + ++ ++ A + G + +D LDQFM Y +L ++++L +
Sbjct: 90 KVGAPPEVVASLEESYAKYESFNASSGRIGGGSIGEDPALDQFMEAYCEMLIKYEQELTK 149
Query: 155 HVRVHAMEAVMACWDLEQSLQSLT 178
+ EA++ +E L++L
Sbjct: 150 PFK----EAMLFFSRIECQLKALA 169
>gi|147798326|emb|CAN74528.1| hypothetical protein VITISV_031345 [Vitis vinifera]
Length = 214
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A +
Sbjct: 89 TSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASEAAMVRTGTSCIG 144
Query: 130 DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
+D LDQFM Y +L ++++L + + EA++ +E ++LT
Sbjct: 145 EDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALT 189
>gi|108710345|gb|ABF98140.1| Homeobox protein KNOX3, putative [Oryza sativa Japonica Group]
gi|357640296|gb|AET87097.1| fused compound leaf 1 [Oryza sativa]
Length = 166
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+ ET KA+I+ HPLY LL A + C ++ P P++ +LS + + + A
Sbjct: 56 ERETDAIKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSA---LAGELDSRAED 108
Query: 127 RVL----DDKELDQFMTHYVLLLYSFKEQLQQHVR-----VHAMEAVMACWDLE 171
R L D ELD+FM Y+ +L S++++L + ++ MEA + + LE
Sbjct: 109 RYLQGQSSDPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQIDSFTLE 162
>gi|148536339|gb|ABQ85722.1| shoot meristemless-like protein, partial [Populus nigra]
Length = 93
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 9 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPANTG 64
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
+ +D LDQFM Y +L ++++L +
Sbjct: 65 CIGEDPALDQFMEAYCEMLTKYEQELSK 92
>gi|11463937|dbj|BAB18582.1| CRKNOX1 [Ceratopteris richardii]
Length = 512
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+++I+ HP Y +L+ A+V+C +I P P++ L + + + D E
Sbjct: 214 RSKIMSHPTYPRLVMAYVNCHKIGAP----PEVATSLEEISKKYQSFRSSSPAPTGADPE 269
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD FM Y +L + ++L Q + EA+ +E L +L+ + +
Sbjct: 270 LDNFMETYCNVLQKYHDELMQPYK----EAMTFFRKIELQLNALSKGT------VRLCHT 319
Query: 194 DEDQVDSDTNFFD-GSLDGPDSMGFGPLVPTESERSLMERVRHE-----------LKHEL 241
+D+ D++ N G + G S G E + S E HE +K +L
Sbjct: 320 GDDKADANCNSGQHGLISGGSS---GEEDAEEGDVSCGEVDFHEEMIDPLADDQKVKEQL 376
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y I +++E L+K++ GKLP + L WW H KWPYP+
Sbjct: 377 LRKYSGYIYKLKQEFLKKKKKGKLPKNAREKLLDWWNQHYKWPYPS 422
>gi|371767748|gb|AEX56229.1| knotted-like 1 protein [Orchis italica]
Length = 134
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 138 MTHYVLLLYSFKEQLQQHVR-----VHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
M Y +L ++E++ + V+ + E+ ++C +S+ S + + E GA SD
Sbjct: 1 MEVYCGILVKYREEIARPVKEAAEFLREAESQLSCIVGGRSICSFSSTADDEKCGAAYSD 60
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
E G L P+S G T E + R ELK++L + Y I +
Sbjct: 61 SQE-----------GLLLDPNSAG-----ETVMEDKIWAEDR-ELKNQLLRKYNGYIGTL 103
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKW 283
R E+ +KR+ GKLP + L WW H KW
Sbjct: 104 RRELSKKRKMGKLPKEARQKLLGWWEFHNKW 134
>gi|148536335|gb|ABQ85720.1| shoot meristemless-like protein, partial [Populus deltoides]
gi|148536337|gb|ABQ85721.1| shoot meristemless-like protein, partial [Populus maximowiczii]
gi|148536341|gb|ABQ85723.1| shoot meristemless-like protein, partial [Populus trichocarpa]
Length = 92
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 8 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPANTG 63
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
+ +D LDQFM Y +L ++++L +
Sbjct: 64 CIGEDPALDQFMEAYCEMLTKYEQELSK 91
>gi|82908162|gb|ABB93270.1| homeobox transcription factor KN2 [Picea abies]
gi|82908170|gb|ABB93274.1| homeobox transcription factor KN2 [Picea abies]
gi|82908184|gb|ABB93281.1| homeobox transcription factor KN2 [Picea abies]
gi|82908224|gb|ABB93301.1| homeobox transcription factor KN2 [Picea abies]
gi|82908226|gb|ABB93302.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA LS + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LSNEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|350535222|ref|NP_001233927.1| knotted 3 protein [Solanum lycopersicum]
gi|4098242|gb|AAD00252.1| knotted 3 protein [Solanum lycopersicum]
Length = 320
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 44/223 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP---VDQLPKIDAQLSRSRDVLAKYSAVANGRVLD 130
KA+I+ HP Y +LL+A++ C ++ P V+ L +I R ++ K +A +
Sbjct: 91 KAKILSHPYYPKLLNAYIDCQKVGAPASIVNLLEEI-----RQQNDFRKPNATCLC-IGA 144
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELD+FM Y +L +K L + EA ++E L +L E
Sbjct: 145 DPELDEFMETYCDILLKYKSDLSRPFD----EATTFLNNIEMQLGNLCKDDDEEEEEELS 200
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
D + S+ +ELK L + + +
Sbjct: 201 CGD-------------------------------ASSSMRRSEDNELKDRLLRKFGSHLS 229
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNS 293
++ E +K++ GKLP + +L AWW H +WPY T + NS
Sbjct: 230 SLKLEFSKKKKKGKLPKEAREMLLAWWYDHFRWPYSTEADKNS 272
>gi|148536333|gb|ABQ85719.1| shoot meristemless-like protein, partial [Populus balsamifera]
Length = 89
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D + KA+I+ HP Y +LL+A+ +C ++ P P++ A+L + A + G
Sbjct: 7 DGSSSSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPTNTG 62
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQL 152
+ +D LDQFM Y +L ++++L
Sbjct: 63 CIGEDPALDQFMEAYCEMLTKYEQEL 88
>gi|371767712|gb|AEX56211.1| knotted-like 4 protein [Dactylorhiza incarnata]
Length = 138
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 216 GFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKA 275
+G P+E S +ELK L++ + + +++E L+ + GK+P D S L
Sbjct: 49 SYGDDDPSEIHDSSSRVPENELKEMLRKKHSGYLSSLKKEFLKTTKKGKIPRDARSTLLV 108
Query: 276 WWLSHAKWPYPT 287
WW SH +WPYPT
Sbjct: 109 WWNSHYQWPYPT 120
>gi|3462614|gb|AAC33009.1| knotted I class homeodomain protein [Pisum sativum]
Length = 251
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR-DVLAKYSAVANGR 127
E KA+I+ HP Y LL A++ C +I P P+ A++ +R + A+ + N R
Sbjct: 112 EAESIKAKIIAHPQYSSLLQAYMDCQKIGAP----PEAVARMVEARQEFEARQRSSVNSR 167
Query: 128 -VLDDKELDQFMTHYVLLLYSFKEQLQQHVR 157
D ELDQFM Y +L ++E+L + ++
Sbjct: 168 ESSKDPELDQFMEAYYDMLVKYREELTRPIQ 198
>gi|82911468|gb|ABB94879.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|55669483|gb|AAV54609.1| homeobox transcription factor KN2 [Pinus strobus]
Length = 244
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I+ HP Y LL A++ C +I P + ++DA L+R + S ++ G D E
Sbjct: 170 KSKILAHPQYPSLLGAYIDCQKIGAPPEVAARLDA-LTREYENQQHRSTLSIGM---DPE 225
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y +L + E+L
Sbjct: 226 LDQFMEAYCEMLTKYHEEL 244
>gi|82911202|gb|ABB94746.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82911178|gb|ABB94734.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911378|gb|ABB94834.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911496|gb|ABB94893.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|55669485|gb|AAV54610.1| homeobox transcription factor KN2 [Picea glauca]
gi|82908174|gb|ABB93276.1| homeobox transcription factor KN2 [Picea abies]
gi|82908182|gb|ABB93280.1| homeobox transcription factor KN2 [Picea abies]
gi|82908190|gb|ABB93284.1| homeobox transcription factor KN2 [Picea abies]
gi|82908196|gb|ABB93287.1| homeobox transcription factor KN2 [Picea abies]
gi|82908198|gb|ABB93288.1| homeobox transcription factor KN2 [Picea abies]
gi|82908204|gb|ABB93291.1| homeobox transcription factor KN2 [Picea abies]
gi|82908206|gb|ABB93292.1| homeobox transcription factor KN2 [Picea abies]
gi|82908212|gb|ABB93295.1| homeobox transcription factor KN2 [Picea abies]
gi|82908218|gb|ABB93298.1| homeobox transcription factor KN2 [Picea abies]
gi|82908220|gb|ABB93299.1| homeobox transcription factor KN2 [Picea abies]
gi|82908228|gb|ABB93303.1| homeobox transcription factor KN2 [Picea abies]
gi|82908232|gb|ABB93305.1| homeobox transcription factor KN2 [Picea abies]
gi|82909158|gb|ABB93749.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909160|gb|ABB93750.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909162|gb|ABB93751.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909164|gb|ABB93752.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909166|gb|ABB93753.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909168|gb|ABB93754.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909170|gb|ABB93755.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909172|gb|ABB93756.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909174|gb|ABB93757.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909176|gb|ABB93758.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909180|gb|ABB93760.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909182|gb|ABB93761.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909184|gb|ABB93762.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909186|gb|ABB93763.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909188|gb|ABB93764.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909190|gb|ABB93765.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909192|gb|ABB93766.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909194|gb|ABB93767.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909196|gb|ABB93768.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909198|gb|ABB93769.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909200|gb|ABB93770.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909202|gb|ABB93771.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909204|gb|ABB93772.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909206|gb|ABB93773.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909208|gb|ABB93774.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909210|gb|ABB93775.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909212|gb|ABB93776.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909214|gb|ABB93777.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909216|gb|ABB93778.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909218|gb|ABB93779.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909220|gb|ABB93780.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909224|gb|ABB93782.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909226|gb|ABB93783.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909228|gb|ABB93784.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909230|gb|ABB93785.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909232|gb|ABB93786.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909234|gb|ABB93787.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909236|gb|ABB93788.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909238|gb|ABB93789.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909240|gb|ABB93790.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909242|gb|ABB93791.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909244|gb|ABB93792.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909246|gb|ABB93793.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909248|gb|ABB93794.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909250|gb|ABB93795.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909252|gb|ABB93796.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909254|gb|ABB93797.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909256|gb|ABB93798.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909258|gb|ABB93799.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909260|gb|ABB93800.1| homeobox transcription factor KN2 [Picea mariana]
gi|82911120|gb|ABB94705.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911122|gb|ABB94706.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911124|gb|ABB94707.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911126|gb|ABB94708.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911128|gb|ABB94709.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911130|gb|ABB94710.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911132|gb|ABB94711.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911134|gb|ABB94712.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911138|gb|ABB94714.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911140|gb|ABB94715.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911142|gb|ABB94716.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911144|gb|ABB94717.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911146|gb|ABB94718.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911148|gb|ABB94719.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911150|gb|ABB94720.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911154|gb|ABB94722.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911158|gb|ABB94724.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911160|gb|ABB94725.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911162|gb|ABB94726.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911164|gb|ABB94727.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911168|gb|ABB94729.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911170|gb|ABB94730.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911176|gb|ABB94733.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911180|gb|ABB94735.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911184|gb|ABB94737.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911188|gb|ABB94739.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911190|gb|ABB94740.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911196|gb|ABB94743.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911198|gb|ABB94744.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911200|gb|ABB94745.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911204|gb|ABB94747.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911206|gb|ABB94748.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911208|gb|ABB94749.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911210|gb|ABB94750.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911212|gb|ABB94751.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911214|gb|ABB94752.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911216|gb|ABB94753.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911218|gb|ABB94754.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911222|gb|ABB94756.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911224|gb|ABB94757.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911226|gb|ABB94758.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911228|gb|ABB94759.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911230|gb|ABB94760.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911232|gb|ABB94761.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911236|gb|ABB94763.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911238|gb|ABB94764.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911246|gb|ABB94768.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911260|gb|ABB94775.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911262|gb|ABB94776.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911268|gb|ABB94779.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911270|gb|ABB94780.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911272|gb|ABB94781.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911274|gb|ABB94782.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911278|gb|ABB94784.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911282|gb|ABB94786.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911286|gb|ABB94788.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911288|gb|ABB94789.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911290|gb|ABB94790.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911292|gb|ABB94791.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911294|gb|ABB94792.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911304|gb|ABB94797.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911308|gb|ABB94799.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911310|gb|ABB94800.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911314|gb|ABB94802.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911316|gb|ABB94803.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911318|gb|ABB94804.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911320|gb|ABB94805.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911322|gb|ABB94806.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911328|gb|ABB94809.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911330|gb|ABB94810.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911332|gb|ABB94811.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911336|gb|ABB94813.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911338|gb|ABB94814.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911344|gb|ABB94817.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911346|gb|ABB94818.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911348|gb|ABB94819.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911356|gb|ABB94823.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911360|gb|ABB94825.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911364|gb|ABB94827.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911366|gb|ABB94828.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911368|gb|ABB94829.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911370|gb|ABB94830.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911374|gb|ABB94832.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911376|gb|ABB94833.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911382|gb|ABB94836.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911384|gb|ABB94837.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911386|gb|ABB94838.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911388|gb|ABB94839.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911390|gb|ABB94840.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911394|gb|ABB94842.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911396|gb|ABB94843.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911398|gb|ABB94844.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911400|gb|ABB94845.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911402|gb|ABB94846.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911404|gb|ABB94847.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911406|gb|ABB94848.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911408|gb|ABB94849.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911410|gb|ABB94850.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911418|gb|ABB94854.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911420|gb|ABB94855.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911422|gb|ABB94856.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911424|gb|ABB94857.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911426|gb|ABB94858.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911432|gb|ABB94861.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911434|gb|ABB94862.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911436|gb|ABB94863.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911438|gb|ABB94864.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911442|gb|ABB94866.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911444|gb|ABB94867.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911446|gb|ABB94868.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911450|gb|ABB94870.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911456|gb|ABB94873.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911458|gb|ABB94874.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911460|gb|ABB94875.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911462|gb|ABB94876.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911464|gb|ABB94877.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911472|gb|ABB94881.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911478|gb|ABB94884.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911480|gb|ABB94885.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911486|gb|ABB94888.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911490|gb|ABB94890.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911494|gb|ABB94892.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911498|gb|ABB94894.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911500|gb|ABB94895.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|11181645|gb|AAG32676.1| homeobox protein [Physcomitrella patens]
Length = 30
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ GKLP TT++LKAWW +H+KWPYPT
Sbjct: 3 KKKGKLPEGTTTVLKAWWQAHSKWPYPT 30
>gi|82911392|gb|ABB94841.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTNEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82911136|gb|ABB94713.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTNEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|28564574|dbj|BAC57683.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
Length = 412
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHV 156
D ELDQFM Y +L ++E+L + +
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPI 168
>gi|82908152|gb|ABB93265.1| homeobox transcription factor KN2 [Picea abies]
gi|82908154|gb|ABB93266.1| homeobox transcription factor KN2 [Picea abies]
gi|82908156|gb|ABB93267.1| homeobox transcription factor KN2 [Picea abies]
gi|82908158|gb|ABB93268.1| homeobox transcription factor KN2 [Picea abies]
gi|82908160|gb|ABB93269.1| homeobox transcription factor KN2 [Picea abies]
gi|82908164|gb|ABB93271.1| homeobox transcription factor KN2 [Picea abies]
gi|82908166|gb|ABB93272.1| homeobox transcription factor KN2 [Picea abies]
gi|82908168|gb|ABB93273.1| homeobox transcription factor KN2 [Picea abies]
gi|82908172|gb|ABB93275.1| homeobox transcription factor KN2 [Picea abies]
gi|82908176|gb|ABB93277.1| homeobox transcription factor KN2 [Picea abies]
gi|82908178|gb|ABB93278.1| homeobox transcription factor KN2 [Picea abies]
gi|82908186|gb|ABB93282.1| homeobox transcription factor KN2 [Picea abies]
gi|82908188|gb|ABB93283.1| homeobox transcription factor KN2 [Picea abies]
gi|82908192|gb|ABB93285.1| homeobox transcription factor KN2 [Picea abies]
gi|82908194|gb|ABB93286.1| homeobox transcription factor KN2 [Picea abies]
gi|82908200|gb|ABB93289.1| homeobox transcription factor KN2 [Picea abies]
gi|82908202|gb|ABB93290.1| homeobox transcription factor KN2 [Picea abies]
gi|82908208|gb|ABB93293.1| homeobox transcription factor KN2 [Picea abies]
gi|82908210|gb|ABB93294.1| homeobox transcription factor KN2 [Picea abies]
gi|82908214|gb|ABB93296.1| homeobox transcription factor KN2 [Picea abies]
gi|82908222|gb|ABB93300.1| homeobox transcription factor KN2 [Picea abies]
gi|82908230|gb|ABB93304.1| homeobox transcription factor KN2 [Picea abies]
gi|82908234|gb|ABB93306.1| homeobox transcription factor KN2 [Picea abies]
gi|82908236|gb|ABB93307.1| homeobox transcription factor KN2 [Picea abies]
gi|82908238|gb|ABB93308.1| homeobox transcription factor KN2 [Picea abies]
gi|82908240|gb|ABB93309.1| homeobox transcription factor KN2 [Picea abies]
gi|82908242|gb|ABB93310.1| homeobox transcription factor KN2 [Picea abies]
gi|82911152|gb|ABB94721.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911156|gb|ABB94723.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911166|gb|ABB94728.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911172|gb|ABB94731.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911174|gb|ABB94732.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911182|gb|ABB94736.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911186|gb|ABB94738.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911192|gb|ABB94741.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911194|gb|ABB94742.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911220|gb|ABB94755.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911234|gb|ABB94762.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911240|gb|ABB94765.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911242|gb|ABB94766.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911244|gb|ABB94767.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911248|gb|ABB94769.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911250|gb|ABB94770.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911254|gb|ABB94772.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911256|gb|ABB94773.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911258|gb|ABB94774.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911264|gb|ABB94777.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911266|gb|ABB94778.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911276|gb|ABB94783.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911280|gb|ABB94785.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911284|gb|ABB94787.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911296|gb|ABB94793.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911298|gb|ABB94794.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911300|gb|ABB94795.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911302|gb|ABB94796.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911306|gb|ABB94798.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911312|gb|ABB94801.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911324|gb|ABB94807.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911326|gb|ABB94808.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911340|gb|ABB94815.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911342|gb|ABB94816.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911352|gb|ABB94821.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911354|gb|ABB94822.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911358|gb|ABB94824.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911362|gb|ABB94826.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911372|gb|ABB94831.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911380|gb|ABB94835.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911412|gb|ABB94851.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911414|gb|ABB94852.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911428|gb|ABB94859.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911430|gb|ABB94860.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911440|gb|ABB94865.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911454|gb|ABB94872.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911466|gb|ABB94878.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911470|gb|ABB94880.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911474|gb|ABB94882.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911476|gb|ABB94883.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911482|gb|ABB94886.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911484|gb|ABB94887.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911488|gb|ABB94889.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911492|gb|ABB94891.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911502|gb|ABB94896.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTNEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82909178|gb|ABB93759.1| homeobox transcription factor KN2 [Picea mariana]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G D E
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM---DPE 229
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y +L + E+L
Sbjct: 230 LDQFMEAYCEMLTKYHEEL 248
>gi|82908180|gb|ABB93279.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|329757143|gb|AEC04751.1| knotted-like homeobox KNOX2 [Fragaria vesca]
Length = 432
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA---KYSAVAN 125
E KA+I+ HP Y LL A++ C R+ P + + A+LS +R + S +
Sbjct: 112 EVEAIKAKIIAHPHYSNLLQAYMDCQRVGAPSE----VVARLSAARQEFVARQRSSVSSR 167
Query: 126 GRVLDDKELDQFMTHYVLLLYSFKEQLQQHVR 157
D ELDQFM Y +L ++E+L + ++
Sbjct: 168 DASSKDPELDQFMEAYYDMLVKYREELTRPIQ 199
>gi|168831390|gb|ACA34976.1| KNOX1, partial [Streptocarpus glandulosissimus]
Length = 220
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 38/210 (18%)
Query: 89 AHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD---DKELDQFMTHYVLLL 145
A++ C ++ P P++ A+L+ R D D ELDQFM Y +L
Sbjct: 1 AYLDCQKVGAP----PEVVARLTAIRHEFEARQRAGGAAARDVSKDPELDQFMEAYYDML 56
Query: 146 YSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGESTGATMSDDDEDQVD 199
++E+L + ++ AME + +E L +T S + G S++D++
Sbjct: 57 VKYREELSRPLQ-EAMEFMRR---IESQLNMITNCPVRILNSEEKCEGVVSSEEDQENSG 112
Query: 200 SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRK 259
+T + D ELK+ L + Y + +++E+ +K
Sbjct: 113 GETELAEIDPRAEDK---------------------ELKNHLLRKYSGYLSSLKQELSKK 151
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
++ GKLP D L +WW H KWPYP+ S
Sbjct: 152 KKKGKLPKDARQKLLSWWELHYKWPYPSES 181
>gi|82911416|gb|ABB94853.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYSEMLTKYHEEL 248
>gi|168058967|ref|XP_001781477.1| KNOX class 1 protein, MKN4 [Physcomitrella patens subsp. patens]
gi|162667114|gb|EDQ53752.1| KNOX class 1 protein, MKN4 [Physcomitrella patens subsp. patens]
Length = 614
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 83/222 (37%), Gaps = 42/222 (18%)
Query: 95 RIATPVDQLPKID---AQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQ 151
RI P L K+D + R + + ++ + + D LD FM Y+ LL F+E
Sbjct: 378 RIGAPKGLLIKLDEMEKKFQRFQYGESSWNVLHVTKFGQDPSLDFFMRSYIDLLTKFRED 437
Query: 152 LQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDG 211
L+ A DLE +P D+ED SD D S D
Sbjct: 438 LENPYNKFAQYKDKVTKDLEDLCGHYIETTP----------DEEDNFGSDIGTKDMSQDL 487
Query: 212 PDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV---DIREEILRKR---RAGKL 265
D G E +LM E IV D +E L+K + GKL
Sbjct: 488 NDLEILG-------EENLM----------YTADIDESIVIDPDAADEELKKMLRLKYGKL 530
Query: 266 PGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
P + +LK W+ H+ WPYP S + + +C LN
Sbjct: 531 PTNARQILKDWFSRHSYWPYP------SEMEKAYLQRLCGLN 566
>gi|380746849|gb|AFE48355.1| shootmeristemless-like homeodomain protein, partial [Cuscuta
pentagona]
Length = 210
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT----GVSPGESTGA 188
ELDQFM Y +L ++++L + + EA++ +E L+SL+ SPGE
Sbjct: 2 ELDQFMEAYCEMLSKYEQELSKPFK----EAMLFLSRIESQLKSLSLPSSFDSPGEGVER 57
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+S ++E ++ +F D P +R ELK +L + Y
Sbjct: 58 NVSSEEEVDHNNAGSFID---------------PQVEDR--------ELKGQLLRKYSGY 94
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+ +++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 95 LGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQ 136
>gi|82911350|gb|ABB94820.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911448|gb|ABB94869.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+++ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKVLAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|254749396|dbj|BAH86594.1| class1 knotted-like homeobox [Selaginella uncinata]
Length = 302
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 63 GRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV---LAK 119
G + D K+ I+ HP Y +L+ AH++C RI V + A + L K
Sbjct: 29 GGSRDESVNDIKSAIILHPQYRELVRAHLNCKRIIEAVQDSGETSADSIIGELIHKHLLK 88
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
+ A + + ELDQFM YV +L ++ E L + A+ C ++EQ L +
Sbjct: 89 FKP-AKSSTVGNPELDQFMVAYVNVLNAWGEDLSKTF----YGAIECCREMEQEL---SN 140
Query: 180 VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHE--- 236
+SPG + DDED + S++G L V E
Sbjct: 141 ISPG-THDILPPPDDEDYM---------SMEGVLEYMENSLTGGGGRGGEGSEVEFEIDP 190
Query: 237 ------LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT-VS 289
LK L + I + E L+K++ GKLP + L WW H PYPT V
Sbjct: 191 FAGDKELKEMLMCKFGGFIKGLNREQLQKKKKGKLPKEARDKLFQWWSEHLDHPYPTEVE 250
Query: 290 RTNSC 294
+ C
Sbjct: 251 KAQLC 255
>gi|116783734|gb|ABK23067.1| unknown [Picea sitchensis]
Length = 241
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 94 LRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQ 153
++I P + + ++DA L+ + + V+ G D ELDQFM Y +L + E+L
Sbjct: 1 MQIGAPPEVVARLDA-LTNEYENQQHRTTVSIGM---DPELDQFMEAYCEMLTKYHEELT 56
Query: 154 QHVRVHAMEAVMACWDLEQSLQSLTG----VSPG-----ESTGATMSDDDEDQVDSDTNF 204
+ + EA+ +E L SL+ +SP ++ G S++ ED +T+F
Sbjct: 57 KPFK----EAMSFLKKIEAQLNSLSKGTIRISPSAENDEKTEGGASSEEVEDGSGGETDF 112
Query: 205 FDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK 264
E + +E ELK L + Y + +++E ++K++ GK
Sbjct: 113 ------------------QEVDHHAVED--RELKDHLLRKYSGYLSSLKQEFMKKKKKGK 152
Query: 265 LPGDTTSLLKAWWLSHAKWPYPT 287
LP D L WW H KWPYP+
Sbjct: 153 LPKDARQKLLDWWTVHYKWPYPS 175
>gi|357115634|ref|XP_003559593.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
4-like [Brachypodium distachyon]
Length = 314
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 44/221 (19%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
T KA+I+ HPLY LL A + C ++ P P++ +LS D L S VL
Sbjct: 66 TDAMKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSSLADDLKSNS----DDVL 117
Query: 130 D---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
+ D ELDQFM Y ++L + ++L + ++ EA ++E + + + G++
Sbjct: 118 EQPADPELDQFMETYCVMLVRYSQELTRQIQ----EADHFFRNMEAHIST---SALGDNC 170
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
S +DE ++ G + G +P ++ ELK + +
Sbjct: 171 EGEASTEDEQEI--------GDVGG---------LPVQAA---------ELKDQFLNKHN 204
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + ++ +K+ GKLP L+ WW + + PYP+
Sbjct: 205 GYLSSLWRKLSKKKTKGKLPSGARQKLQQWWRLNWRSPYPS 245
>gi|15667619|dbj|BAB68310.1| transcription factor OSH3 [Oryza sativa Indica Group]
Length = 365
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 23/221 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS------LTGVSPGEST 186
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESKA 189
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G SDDDE + S + + D G + P +++L K L + Y
Sbjct: 190 GLDSSDDDEHEDGSGMEMMEAAEDE----DLGIIDPRSDDKAL--------KRHLLRKYS 237
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E+ +KR+ GKLP + L WW H +WPYP+
Sbjct: 238 GYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPS 278
>gi|82909222|gb|ABB93781.1| homeobox transcription factor KN2 [Picea mariana]
Length = 248
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+++ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKMLAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|13021921|gb|AAK11581.1|AF323786_1 KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 204
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 86 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 138
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHV 156
D ELDQFM Y +L ++E+L + +
Sbjct: 139 DARDPELDQFMEAYCNMLAKYREELTRPI 167
>gi|82908216|gb|ABB93297.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++D L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDV-LTNEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|290996216|ref|XP_002680678.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
gi|284094300|gb|EFC47934.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
Length = 739
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 237 LKHELKQGYKEKIVDIREE-ILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS-RTNSC 294
+K LK Y KI+ +E ++R +R G LP T++LK+W SH PYPT S + + C
Sbjct: 559 MKQLLKDKYLTKILSTQENTLMRSKRRGNLPRHATNVLKSWLYSHFLHPYPTESEKKDLC 618
Query: 295 IAISLFNSICTLNSYLV 311
+ L ++ +N++ +
Sbjct: 619 METGL--TLTQVNNWFI 633
>gi|82911252|gb|ABB94771.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911452|gb|ABB94871.1| homeobox transcription factor KN2 [Picea glauca]
Length = 247
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA + + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTNEYEN--QHRTTVSIGM- 225
Query: 129 LDDKELDQFMTHYVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 226 --DPELDQFMEAYCEMLTKYHEEL 247
>gi|167859843|gb|ACA04875.1| KNOTTED1-like homeodomain protein 2 [Picea abies]
Length = 319
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--AQLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ H Y +L++A++ C ++ P D + ++D +Q ++ +A S A D
Sbjct: 139 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATISIGA------D 192
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
ELDQFM Y + ++E+L + + EA+ +E L +LT
Sbjct: 193 PELDQFMEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGALT 235
>gi|222630076|gb|EEE62208.1| hypothetical protein OsJ_16995 [Oryza sativa Japonica Group]
Length = 263
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 83/214 (38%), Gaps = 69/214 (32%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I GHP Y LLSA++ C R T L + +L+R D E
Sbjct: 56 KAQIAGHPSYPSLLSAYIEC-RKETYCRVLERYKEELTRPFD-----------------E 97
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
F+T + L SL G +P +D+
Sbjct: 98 AASFLT-----------------------------GIHTQLASLCGGAP------PPTDN 122
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
ED+ S G D D FG E L + HELK L + Y + +R
Sbjct: 123 SEDEPCS------GDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSRLR 166
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 167 SEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 200
>gi|108710858|gb|ABF98653.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
Length = 242
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 94 LRIATPVDQLPKIDAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQ 151
L++ P P++ A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+
Sbjct: 6 LQVGAP----PEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREE 61
Query: 152 LQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDG 211
L + ++ AME + + + + S++G S + S++D++ +T + G
Sbjct: 62 LTRPLQ-EAMEFLRRV-ETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHG 119
Query: 212 PDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 271
D ELKH L + Y + +++E+ +K++ GKLP D
Sbjct: 120 VD---------------------QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQ 158
Query: 272 LLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLNSYLV 311
L WW H KWPYP+ S+ +A S + +N++ +
Sbjct: 159 QLLNWWELHYKWPYPSESQ-KVALAESTGLDLKQINNWFI 197
>gi|89953327|gb|ABD83273.1| Fgenesh protein 1 [Beta vulgaris]
Length = 158
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
DE V SD ++ G +D D L P + ER +LK +L + + I ++
Sbjct: 9 DEGVVSSDEDYSGGEIDVQD------LQPKDEER--------DLKDQLLRRFGSHISSLK 54
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCI 295
E +K++ GKLP + +L WW +H KWPYPT++ T I
Sbjct: 55 LEFSKKKKKGKLPREARQMLFEWWNAHYKWPYPTLAWTYVSI 96
>gi|255636180|gb|ACU18432.1| unknown [Glycine max]
Length = 196
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HPLY L+SA++ C ++ P +L + +++R + N D E
Sbjct: 63 KTQIATHPLYPNLVSAYIECRKVGAP-PELASLLEEIARESHPTDALREIGN-----DPE 116
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
LD+FM Y +L+ +K+ L + EA + +E L +L
Sbjct: 117 LDEFMESYCEVLHRYKQGLSKPFN----EATLFLCSIESQLSNLC 157
>gi|255537924|ref|XP_002510027.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223550728|gb|EEF52214.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 259
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 95 RIATPVDQLPKIDAQLSRSR-DVLAKYSAVANGR-VLDDKELDQFMTHYVLLLYSFKEQL 152
R+ P P++ A+L +R + +K + N R L D ELDQFM Y +L ++E+L
Sbjct: 21 RVGAP----PEVVARLVAARQEFESKQRSSVNSRDNLKDPELDQFMEAYCDMLMKYREEL 76
Query: 153 QQHVRVHAMEAVMACWDLEQSLQSLTGV------SPGESTGATMSDDDEDQVDSDTNFFD 206
+ ++ EA+ +E L + S +S G S++D+D +T
Sbjct: 77 TRPIQ----EAMDFMRRIETQLNMICNGPLRIFNSDEKSEGVGSSEEDQDNSGGETEL-- 130
Query: 207 GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLP 266
P+ + P +R ELK+ L + Y + +++E+ +K++ GKLP
Sbjct: 131 -----PE------IDPRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLP 171
Query: 267 GDTTSLLKAWWLSHAKWPYPT 287
+ L +WW H KWPYP+
Sbjct: 172 KEARQKLLSWWELHYKWPYPS 192
>gi|357640306|gb|AET87102.1| fused compound leaf 1 [Zea mays]
Length = 163
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I+ HPLY +L A + C ++ P P+I +LS + DV R D
Sbjct: 60 KAKIMSHPLYPAVLRAFIDCRKVGAP----PEIVGRLSALADDVEMNSDDKQEQRRAADP 115
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVR-----VHAMEAVMACWDL 170
ELDQFM Y +L ++++L + ++ +MEA + + L
Sbjct: 116 ELDQFMEIYCHMLVRYRQELTRPIQEADEFFRSMEAQIDAFSL 158
>gi|217072832|gb|ACJ84776.1| unknown [Medicago truncatula]
Length = 184
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--RSRDVLAKYSAVANGRVLDD 131
KA+I HP Y +LL A++ C ++ P P+I + L R + + K V + D
Sbjct: 73 KAKIASHPYYPRLLQAYIDCQKVGAP----PEIASLLEEIRRENDMCKRDVVVSTCFGAD 128
Query: 132 KELDQFMTHYVLLLYSFKEQLQQ 154
ELD+FM Y +L +K L +
Sbjct: 129 PELDEFMESYCDMLVKYKSDLTR 151
>gi|156257413|gb|ABU63127.1| transcription factor STM [Washingtonia robusta]
Length = 147
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 58 ASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDV- 116
ASN +G ED++ KA+I+ HP Y +LLSA+V+C ++ P++ + +++ + S +
Sbjct: 59 ASNASG--EDYDNSVIKAKIMAHPQYPRLLSAYVNCQKVGAPLEVVARLEEACASSFMIG 116
Query: 117 ---LAKYSAVANGRVLDDKELDQFMTHYV 142
+ + +D LDQFM Y
Sbjct: 117 QASSSAAAGXGGSGGGEDPALDQFMEAYC 145
>gi|82910460|gb|ABB94382.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910476|gb|ABB94390.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D AP N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNAPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|281200802|gb|EFA75019.1| putative homeobox transcription factor [Polysphondylium pallidum
PN500]
Length = 565
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+KR+ GKLPG++TS+LK+W H PYPT
Sbjct: 480 KKRKRGKLPGESTSILKSWLFEHNMHPYPT 509
>gi|108710348|gb|ABF98143.1| Homeobox protein OSH1, putative [Oryza sativa Japonica Group]
gi|125545214|gb|EAY91353.1| hypothetical protein OsI_12973 [Oryza sativa Indica Group]
gi|357640298|gb|AET87098.1| fused compound leaf 2 [Oryza sativa]
Length = 194
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I+ HPLY LL A V C ++ P P++ +LS S V+ + R L
Sbjct: 72 KAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLS-SLAVVTDVPQYSGDRCLPAQQ 126
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVR 157
D ELDQFM Y +L + ++L + ++
Sbjct: 127 PAADPELDQFMETYCYMLTRYGQELARPIQ 156
>gi|82912058|gb|ABB95168.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912074|gb|ABB95176.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912236|gb|ABB95257.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--AQLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ H Y +L++A++ C ++ P D + ++D +Q ++ +A S A D
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATISIGA------D 263
Query: 132 KELDQFMTHYVLLLYSFKEQL 152
ELDQFM Y + ++E+L
Sbjct: 264 PELDQFMEAYCEMFIKYQEEL 284
>gi|82911902|gb|ABB95090.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911910|gb|ABB95094.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911916|gb|ABB95097.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911950|gb|ABB95114.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911964|gb|ABB95121.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912010|gb|ABB95144.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912026|gb|ABB95152.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912028|gb|ABB95153.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912046|gb|ABB95162.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912066|gb|ABB95172.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912070|gb|ABB95174.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912078|gb|ABB95178.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912132|gb|ABB95205.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912138|gb|ABB95208.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912206|gb|ABB95242.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912216|gb|ABB95247.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912224|gb|ABB95251.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912240|gb|ABB95259.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912266|gb|ABB95272.1| homeobox transcription factor KN3 [Picea glauca]
Length = 285
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--AQLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ H Y +L++A++ C ++ P D + ++D +Q ++ +A S A D
Sbjct: 211 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATISIGA------D 264
Query: 132 KELDQFMTHYVLLLYSFKEQL 152
ELDQFM Y + ++E+L
Sbjct: 265 PELDQFMEAYCEMFIKYQEEL 285
>gi|82912052|gb|ABB95165.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKID--AQLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ H Y +L++A++ C ++ P D + ++D +Q ++ +A S A D
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATISIGA------D 263
Query: 132 KELDQFMTHYVLLLYSFKEQL 152
ELDQFM Y + ++E+L
Sbjct: 264 PELDQFMEAYCEMFIKYQEEL 284
>gi|73918025|gb|AAZ93629.1| class 1 Knotted 1-like protein [Eschscholzia californica]
Length = 227
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Query: 86 LLSAHVSCLRIATPVDQLPKIDAQLSRSRD--VLAKYSAVANGRVL--DDKELDQFMTHY 141
LL A++ C ++ P P++ + L+++R V + S+V G L D ELDQFM Y
Sbjct: 3 LLQAYIDCQKVGAP----PEVVSWLTQARQEFVERQKSSVNCGDKLVSADPELDQFMEAY 58
Query: 142 VLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP------GESTGATMSDDDE 195
+L ++E+L ++ AME + +E L +L P + GA S++ +
Sbjct: 59 YDMLVKYREELTGPLQ-EAMEFMRK---IEAQLNTLCINGPIRVFTDEKCEGAGSSEEGQ 114
Query: 196 DQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREE 255
+ +T P+ + P +R ELK+ L + Y + +++E
Sbjct: 115 ENSAGETEL-------PE------IDPRAEDR--------ELKNHLLKKYSGYLSSLKKE 153
Query: 256 ILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +K++ GKLP D L WW SH KWPYP+
Sbjct: 154 LSKKKKKGKLPKDARQKLLNWWESHYKWPYPS 185
>gi|212723636|ref|NP_001131690.1| uncharacterized protein LOC100193050 [Zea mays]
gi|194692252|gb|ACF80210.1| unknown [Zea mays]
gi|414871975|tpg|DAA50532.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 207
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK+ L Y + + E+ RK++ GKLP D L WW H +WPYP+
Sbjct: 77 ELKNHLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 128
>gi|125570066|gb|EAZ11581.1| hypothetical protein OsJ_01445 [Oryza sativa Japonica Group]
Length = 169
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLKEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELD+FM Y +L +KE+L +
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSR 121
>gi|82912192|gb|ABB95235.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912198|gb|ABB95238.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|302813278|ref|XP_002988325.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300144057|gb|EFJ10744.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 413
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 74 KAEIVGHPLYEQLLSA-----HVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
KA IV H Y LL++ V ++ P D++ K+D + +L V
Sbjct: 156 KASIVAHAHYPDLLASLLNIQKVLLAQVGAPPDRVAKLD----EAGQLLLNLRPAVVTSV 211
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMA-CWDLEQSLQSLTGVSPGESTG 187
+ ELD FM Y ++ F+++ + +E MA C L ++ S ++
Sbjct: 212 GANPELDDFMVAYCAIMKEFEDEFRN-----VLEGAMAFCKTKTDQLGAIAAASIHMNSV 266
Query: 188 ATMSDDD----------------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
T D E + D ++ +D PL E+
Sbjct: 267 VTSVSDHPVESEEPETTTTGGGAEIEEDISSSEVGNEVD--------PLAKDEN------ 312
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LK L Q Y I +++E L+K++ GKLP +T L WW +H KWPYP+
Sbjct: 313 -----LKEYLAQRYGAYIKGLKQEFLKKKKKGKLPKHSTEKLYEWWEAHIKWPYPS 363
>gi|82908358|gb|ABB93368.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|302819518|ref|XP_002991429.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300140822|gb|EFJ07541.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 417
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 74 KAEIVGHPLYEQLLSA-----HVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
KA IV H Y LL++ V ++ P D++ K+D + +L V
Sbjct: 160 KASIVAHAHYPDLLASLLNIQKVLLAQVGAPPDRVAKLD----EAGQLLLNLRPAVVTSV 215
Query: 129 LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMA-CWDLEQSLQSLTGVSPGESTG 187
+ ELD FM Y ++ F+++ + +E MA C L ++ S ++
Sbjct: 216 GANPELDDFMVAYCAIMKEFEDEFRN-----VLEGAMAFCKTKTDQLGAIAAASVHMNSV 270
Query: 188 ATMSDDD----------------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
T D E + D ++ +D PL E+
Sbjct: 271 VTSVSDHPVESEEPETTTTGGGAEIEEDISSSEVGNEVD--------PLAKDEN------ 316
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
LK L Q Y I +++E L+K++ GKLP +T L WW +H KWPYP+
Sbjct: 317 -----LKEYLAQRYGAYIKGLKQEFLKKKKKGKLPKHSTEKLYEWWEAHIKWPYPS 367
>gi|82908340|gb|ABB93359.1| homeobox transcription factor KN3 [Picea abies]
Length = 285
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 211 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 266
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 267 LDQFMEAYCEMFIKYQEEL 285
>gi|82911990|gb|ABB95134.1| homeobox transcription factor KN3 [Picea glauca]
Length = 285
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 211 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 266
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 267 LDQFMEAYCEMFIKYQEEL 285
>gi|55669489|gb|AAV54612.1| homeobox transcription factor KN3 [Picea glauca]
gi|55669491|gb|AAV54613.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909366|gb|ABB93853.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909368|gb|ABB93854.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909370|gb|ABB93855.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909372|gb|ABB93856.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909374|gb|ABB93857.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909376|gb|ABB93858.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909378|gb|ABB93859.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909380|gb|ABB93860.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909384|gb|ABB93862.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909386|gb|ABB93863.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909388|gb|ABB93864.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909390|gb|ABB93865.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909394|gb|ABB93867.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909396|gb|ABB93868.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909398|gb|ABB93869.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909400|gb|ABB93870.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909402|gb|ABB93871.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909404|gb|ABB93872.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909408|gb|ABB93874.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909410|gb|ABB93875.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909412|gb|ABB93876.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909414|gb|ABB93877.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909416|gb|ABB93878.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909420|gb|ABB93880.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909422|gb|ABB93881.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909424|gb|ABB93882.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909426|gb|ABB93883.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909428|gb|ABB93884.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909430|gb|ABB93885.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909432|gb|ABB93886.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909434|gb|ABB93887.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909436|gb|ABB93888.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909438|gb|ABB93889.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909440|gb|ABB93890.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909442|gb|ABB93891.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909444|gb|ABB93892.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909446|gb|ABB93893.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909448|gb|ABB93894.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909450|gb|ABB93895.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909452|gb|ABB93896.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909454|gb|ABB93897.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909456|gb|ABB93898.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909458|gb|ABB93899.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909460|gb|ABB93900.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909462|gb|ABB93901.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909464|gb|ABB93902.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909466|gb|ABB93903.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909468|gb|ABB93904.1| homeobox transcription factor KN3 [Picea mariana]
gi|82911900|gb|ABB95089.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911904|gb|ABB95091.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911906|gb|ABB95092.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911908|gb|ABB95093.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911912|gb|ABB95095.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911914|gb|ABB95096.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911918|gb|ABB95098.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911920|gb|ABB95099.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911922|gb|ABB95100.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911924|gb|ABB95101.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911926|gb|ABB95102.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911928|gb|ABB95103.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911930|gb|ABB95104.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911932|gb|ABB95105.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911934|gb|ABB95106.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911936|gb|ABB95107.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911938|gb|ABB95108.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911940|gb|ABB95109.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911942|gb|ABB95110.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911944|gb|ABB95111.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911946|gb|ABB95112.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911948|gb|ABB95113.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911952|gb|ABB95115.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911954|gb|ABB95116.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911956|gb|ABB95117.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911958|gb|ABB95118.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911960|gb|ABB95119.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911962|gb|ABB95120.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911966|gb|ABB95122.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911968|gb|ABB95123.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911970|gb|ABB95124.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911972|gb|ABB95125.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911974|gb|ABB95126.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911978|gb|ABB95128.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911980|gb|ABB95129.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911982|gb|ABB95130.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911984|gb|ABB95131.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911986|gb|ABB95132.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911988|gb|ABB95133.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911992|gb|ABB95135.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911994|gb|ABB95136.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911996|gb|ABB95137.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911998|gb|ABB95138.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912000|gb|ABB95139.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912002|gb|ABB95140.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912004|gb|ABB95141.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912006|gb|ABB95142.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912008|gb|ABB95143.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912012|gb|ABB95145.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912014|gb|ABB95146.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912018|gb|ABB95148.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912020|gb|ABB95149.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912022|gb|ABB95150.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912024|gb|ABB95151.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912030|gb|ABB95154.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912032|gb|ABB95155.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912034|gb|ABB95156.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912036|gb|ABB95157.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912038|gb|ABB95158.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912040|gb|ABB95159.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912042|gb|ABB95160.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912044|gb|ABB95161.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912048|gb|ABB95163.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912050|gb|ABB95164.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912054|gb|ABB95166.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912062|gb|ABB95170.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912064|gb|ABB95171.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912068|gb|ABB95173.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912072|gb|ABB95175.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912076|gb|ABB95177.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912080|gb|ABB95179.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912082|gb|ABB95180.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912084|gb|ABB95181.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912086|gb|ABB95182.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912088|gb|ABB95183.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912090|gb|ABB95184.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912092|gb|ABB95185.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912094|gb|ABB95186.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912096|gb|ABB95187.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912098|gb|ABB95188.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912100|gb|ABB95189.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912102|gb|ABB95190.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912104|gb|ABB95191.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912106|gb|ABB95192.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912108|gb|ABB95193.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912110|gb|ABB95194.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912112|gb|ABB95195.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912114|gb|ABB95196.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912116|gb|ABB95197.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912118|gb|ABB95198.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912120|gb|ABB95199.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912122|gb|ABB95200.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912124|gb|ABB95201.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912126|gb|ABB95202.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912128|gb|ABB95203.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912130|gb|ABB95204.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912134|gb|ABB95206.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912136|gb|ABB95207.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912140|gb|ABB95209.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912142|gb|ABB95210.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912144|gb|ABB95211.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912146|gb|ABB95212.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912148|gb|ABB95213.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912150|gb|ABB95214.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912152|gb|ABB95215.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912154|gb|ABB95216.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912156|gb|ABB95217.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912158|gb|ABB95218.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912160|gb|ABB95219.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912162|gb|ABB95220.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912164|gb|ABB95221.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912166|gb|ABB95222.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912168|gb|ABB95223.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912170|gb|ABB95224.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912172|gb|ABB95225.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912174|gb|ABB95226.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912176|gb|ABB95227.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912178|gb|ABB95228.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912180|gb|ABB95229.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912182|gb|ABB95230.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912184|gb|ABB95231.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912186|gb|ABB95232.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912188|gb|ABB95233.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912190|gb|ABB95234.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912194|gb|ABB95236.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912196|gb|ABB95237.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912200|gb|ABB95239.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912202|gb|ABB95240.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912204|gb|ABB95241.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912208|gb|ABB95243.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912210|gb|ABB95244.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912212|gb|ABB95245.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912214|gb|ABB95246.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912218|gb|ABB95248.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912220|gb|ABB95249.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912222|gb|ABB95250.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912226|gb|ABB95252.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912228|gb|ABB95253.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912230|gb|ABB95254.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912232|gb|ABB95255.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912234|gb|ABB95256.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912238|gb|ABB95258.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912242|gb|ABB95260.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912244|gb|ABB95261.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912246|gb|ABB95262.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912248|gb|ABB95263.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912250|gb|ABB95264.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912252|gb|ABB95265.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912254|gb|ABB95266.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912256|gb|ABB95267.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912258|gb|ABB95268.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912260|gb|ABB95269.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912262|gb|ABB95270.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912264|gb|ABB95271.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912268|gb|ABB95273.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912270|gb|ABB95274.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912272|gb|ABB95275.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912274|gb|ABB95276.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912276|gb|ABB95277.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912278|gb|ABB95278.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912280|gb|ABB95279.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912282|gb|ABB95280.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|13021918|gb|AAK11580.1|AF323785_1 KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 164
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
ELD+FM Y +L +KE+L + EA + L SL G +P
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAP 158
>gi|82911976|gb|ABB95127.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912056|gb|ABB95167.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912060|gb|ABB95169.1| homeobox transcription factor KN3 [Picea glauca]
Length = 282
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 208 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 263
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 264 LDQFMEAYCEMFIKYQEEL 282
>gi|82909406|gb|ABB93873.1| homeobox transcription factor KN3 [Picea mariana]
gi|82912016|gb|ABB95147.1| homeobox transcription factor KN3 [Picea glauca]
Length = 286
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 212 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 267
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 268 LDQFMEAYCEMFIKYQEEL 286
>gi|82908414|gb|ABB93396.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|82908336|gb|ABB93357.1| homeobox transcription factor KN3 [Picea abies]
gi|82908338|gb|ABB93358.1| homeobox transcription factor KN3 [Picea abies]
gi|82908342|gb|ABB93360.1| homeobox transcription factor KN3 [Picea abies]
gi|82908344|gb|ABB93361.1| homeobox transcription factor KN3 [Picea abies]
gi|82908346|gb|ABB93362.1| homeobox transcription factor KN3 [Picea abies]
gi|82908348|gb|ABB93363.1| homeobox transcription factor KN3 [Picea abies]
gi|82908350|gb|ABB93364.1| homeobox transcription factor KN3 [Picea abies]
gi|82908352|gb|ABB93365.1| homeobox transcription factor KN3 [Picea abies]
gi|82908354|gb|ABB93366.1| homeobox transcription factor KN3 [Picea abies]
gi|82908356|gb|ABB93367.1| homeobox transcription factor KN3 [Picea abies]
gi|82908360|gb|ABB93369.1| homeobox transcription factor KN3 [Picea abies]
gi|82908362|gb|ABB93370.1| homeobox transcription factor KN3 [Picea abies]
gi|82908364|gb|ABB93371.1| homeobox transcription factor KN3 [Picea abies]
gi|82908366|gb|ABB93372.1| homeobox transcription factor KN3 [Picea abies]
gi|82908368|gb|ABB93373.1| homeobox transcription factor KN3 [Picea abies]
gi|82908370|gb|ABB93374.1| homeobox transcription factor KN3 [Picea abies]
gi|82908372|gb|ABB93375.1| homeobox transcription factor KN3 [Picea abies]
gi|82908374|gb|ABB93376.1| homeobox transcription factor KN3 [Picea abies]
gi|82908376|gb|ABB93377.1| homeobox transcription factor KN3 [Picea abies]
gi|82908378|gb|ABB93378.1| homeobox transcription factor KN3 [Picea abies]
gi|82908380|gb|ABB93379.1| homeobox transcription factor KN3 [Picea abies]
gi|82908382|gb|ABB93380.1| homeobox transcription factor KN3 [Picea abies]
gi|82908384|gb|ABB93381.1| homeobox transcription factor KN3 [Picea abies]
gi|82908386|gb|ABB93382.1| homeobox transcription factor KN3 [Picea abies]
gi|82908388|gb|ABB93383.1| homeobox transcription factor KN3 [Picea abies]
gi|82908390|gb|ABB93384.1| homeobox transcription factor KN3 [Picea abies]
gi|82908394|gb|ABB93386.1| homeobox transcription factor KN3 [Picea abies]
gi|82908396|gb|ABB93387.1| homeobox transcription factor KN3 [Picea abies]
gi|82908398|gb|ABB93388.1| homeobox transcription factor KN3 [Picea abies]
gi|82908400|gb|ABB93389.1| homeobox transcription factor KN3 [Picea abies]
gi|82908402|gb|ABB93390.1| homeobox transcription factor KN3 [Picea abies]
gi|82908404|gb|ABB93391.1| homeobox transcription factor KN3 [Picea abies]
gi|82908406|gb|ABB93392.1| homeobox transcription factor KN3 [Picea abies]
gi|82908408|gb|ABB93393.1| homeobox transcription factor KN3 [Picea abies]
gi|82908410|gb|ABB93394.1| homeobox transcription factor KN3 [Picea abies]
gi|82908412|gb|ABB93395.1| homeobox transcription factor KN3 [Picea abies]
gi|82908416|gb|ABB93397.1| homeobox transcription factor KN3 [Picea abies]
gi|82908418|gb|ABB93398.1| homeobox transcription factor KN3 [Picea abies]
gi|82908420|gb|ABB93399.1| homeobox transcription factor KN3 [Picea abies]
gi|82908422|gb|ABB93400.1| homeobox transcription factor KN3 [Picea abies]
gi|82908424|gb|ABB93401.1| homeobox transcription factor KN3 [Picea abies]
gi|82908426|gb|ABB93402.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|82908392|gb|ABB93385.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|125525555|gb|EAY73669.1| hypothetical protein OsI_01553 [Oryza sativa Indica Group]
Length = 169
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLEEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELD+FM Y +L +KE+L +
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSR 121
>gi|55669479|gb|AAV54607.1| homeobox transcription factor KN1 [Pinus strobus]
Length = 240
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
D E K++I+ HP Y LL A++ C +I P + + ++DA +D + +++
Sbjct: 169 DNEEHAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREHQDQQRRTASIGM- 227
Query: 127 RVLDDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 228 ----DPELDQFMEAYC 239
>gi|82909382|gb|ABB93861.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909418|gb|ABB93879.1| homeobox transcription factor KN3 [Picea mariana]
Length = 284
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ C ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|82911334|gb|ABB94812.1| homeobox transcription factor KN2 [Picea glauca]
Length = 250
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL A++ C +I P + + ++DA L+ + + V+ G
Sbjct: 169 EAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-LTHEYENQQHRTTVSIGM- 226
Query: 129 LDDKELDQFMTH--YVLLLYSFKEQL 152
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMVKEAYCEMLTKYHEEL 250
>gi|357640304|gb|AET87101.1| fused compound leaf 1 [Lotus japonicus]
Length = 150
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRD--VLAKYSAVANGRVLDD 131
K I HPLYE L+ AH+ CL++ + K+D +L + + ++ K N + +
Sbjct: 28 KRRISSHPLYELLVEAHLDCLKVG----DISKLDRELKKEQKQAIMKK----QNSGMFNH 79
Query: 132 KELDQFMTHYVLLLYSFKEQLQQ 154
ELD FM Y L L KE +++
Sbjct: 80 SELDLFMEAYCLALNKLKEAIEE 102
>gi|82910690|gb|ABB94497.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910720|gb|ABB94512.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDGNSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|82907986|gb|ABB93182.1| homeobox transcription factor KN1 [Picea abies]
gi|82908014|gb|ABB93196.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDASSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|82910624|gb|ABB94464.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910658|gb|ABB94481.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910678|gb|ABB94491.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|55669481|gb|AAV54608.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910338|gb|ABB94321.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910340|gb|ABB94322.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910348|gb|ABB94326.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910362|gb|ABB94333.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910364|gb|ABB94334.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910406|gb|ABB94355.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910440|gb|ABB94372.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910456|gb|ABB94380.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910508|gb|ABB94406.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910512|gb|ABB94408.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910518|gb|ABB94411.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910530|gb|ABB94417.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910580|gb|ABB94442.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910646|gb|ABB94475.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910654|gb|ABB94479.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDGNSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|75164699|sp|Q948L5.1|KNOS7_ORYSJ RecName: Full=Homeobox protein knotted-1-like 7; AltName:
Full=Homeobox protein HOS13; AltName: Full=Homeobox
protein OSH3
gi|15667617|dbj|BAB68309.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|41469271|gb|AAS07153.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
gi|108710860|gb|ABF98655.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 365
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS------LTGVSPGEST 186
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESKA 189
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G SDDDE + S + + D G + P +++L K L + Y
Sbjct: 190 GLDSSDDDEHEDGSGMEMMEAAEDE----DLGIIDPRSDDKAL--------KRHLLRKYS 237
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E+ +KR+ GKLP + L WW H +WP P+
Sbjct: 238 GYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPS 278
>gi|82907970|gb|ABB93174.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|357499175|ref|XP_003619876.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355494891|gb|AES76094.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|357640294|gb|AET87096.1| fused compound leaf 1 [Medicago truncatula]
Length = 161
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K I HPLYE L+ AH+ CL++ + ++ + S + L K N +L E
Sbjct: 43 KTRISNHPLYELLVQAHLDCLKVG----DISNLEIEKSDKKQTLKK----QNLDMLSQSE 94
Query: 134 LDQFMTHYVLLLYSFKEQLQQ 154
LD FM Y L L KE +++
Sbjct: 95 LDLFMEAYCLALSKLKEAMKE 115
>gi|412988463|emb|CCO17799.1| predicted protein [Bathycoccus prasinos]
Length = 529
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 67/176 (38%), Gaps = 29/176 (16%)
Query: 127 RVLDD----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
R+ +D +EL+ FM H F Q+ + E AC + ++ LT +
Sbjct: 293 RICEDAKFKQELNAFMEHSCENARKF----QKELTAIYDETDRACESFDAKMKELTLLES 348
Query: 183 GES-----------TGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
S TGA + +++ DG D F L
Sbjct: 349 NNSKNSPNTIGATATGAASKKRKQGAEEAEKETVDGQDSDEDDRSF----------QLSM 398
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +++L YK+ I + EE L K+ GKLP + +LK +W WPYPT
Sbjct: 399 KSDEAFRNQLLAKYKDDIPALEEEWLNKKPKGKLPKEALIVLKQFWNKKICWPYPT 454
>gi|82907968|gb|ABB93173.1| homeobox transcription factor KN1 [Picea abies]
gi|82907972|gb|ABB93175.1| homeobox transcription factor KN1 [Picea abies]
gi|82907974|gb|ABB93176.1| homeobox transcription factor KN1 [Picea abies]
gi|82907976|gb|ABB93177.1| homeobox transcription factor KN1 [Picea abies]
gi|82907978|gb|ABB93178.1| homeobox transcription factor KN1 [Picea abies]
gi|82907980|gb|ABB93179.1| homeobox transcription factor KN1 [Picea abies]
gi|82907982|gb|ABB93180.1| homeobox transcription factor KN1 [Picea abies]
gi|82907984|gb|ABB93181.1| homeobox transcription factor KN1 [Picea abies]
gi|82907988|gb|ABB93183.1| homeobox transcription factor KN1 [Picea abies]
gi|82907990|gb|ABB93184.1| homeobox transcription factor KN1 [Picea abies]
gi|82907992|gb|ABB93185.1| homeobox transcription factor KN1 [Picea abies]
gi|82907994|gb|ABB93186.1| homeobox transcription factor KN1 [Picea abies]
gi|82907996|gb|ABB93187.1| homeobox transcription factor KN1 [Picea abies]
gi|82907998|gb|ABB93188.1| homeobox transcription factor KN1 [Picea abies]
gi|82908000|gb|ABB93189.1| homeobox transcription factor KN1 [Picea abies]
gi|82908002|gb|ABB93190.1| homeobox transcription factor KN1 [Picea abies]
gi|82908004|gb|ABB93191.1| homeobox transcription factor KN1 [Picea abies]
gi|82908006|gb|ABB93192.1| homeobox transcription factor KN1 [Picea abies]
gi|82908008|gb|ABB93193.1| homeobox transcription factor KN1 [Picea abies]
gi|82908010|gb|ABB93194.1| homeobox transcription factor KN1 [Picea abies]
gi|82908012|gb|ABB93195.1| homeobox transcription factor KN1 [Picea abies]
gi|82908016|gb|ABB93197.1| homeobox transcription factor KN1 [Picea abies]
gi|82908018|gb|ABB93198.1| homeobox transcription factor KN1 [Picea abies]
gi|82908020|gb|ABB93199.1| homeobox transcription factor KN1 [Picea abies]
gi|82908022|gb|ABB93200.1| homeobox transcription factor KN1 [Picea abies]
gi|82908024|gb|ABB93201.1| homeobox transcription factor KN1 [Picea abies]
gi|82908026|gb|ABB93202.1| homeobox transcription factor KN1 [Picea abies]
gi|82908028|gb|ABB93203.1| homeobox transcription factor KN1 [Picea abies]
gi|82908030|gb|ABB93204.1| homeobox transcription factor KN1 [Picea abies]
gi|82908032|gb|ABB93205.1| homeobox transcription factor KN1 [Picea abies]
gi|82908036|gb|ABB93207.1| homeobox transcription factor KN1 [Picea abies]
gi|82908038|gb|ABB93208.1| homeobox transcription factor KN1 [Picea abies]
gi|82908040|gb|ABB93209.1| homeobox transcription factor KN1 [Picea abies]
gi|82908042|gb|ABB93210.1| homeobox transcription factor KN1 [Picea abies]
gi|82908044|gb|ABB93211.1| homeobox transcription factor KN1 [Picea abies]
gi|82908046|gb|ABB93212.1| homeobox transcription factor KN1 [Picea abies]
gi|82908048|gb|ABB93213.1| homeobox transcription factor KN1 [Picea abies]
gi|82908050|gb|ABB93214.1| homeobox transcription factor KN1 [Picea abies]
gi|82908052|gb|ABB93215.1| homeobox transcription factor KN1 [Picea abies]
gi|82908054|gb|ABB93216.1| homeobox transcription factor KN1 [Picea abies]
gi|82908056|gb|ABB93217.1| homeobox transcription factor KN1 [Picea abies]
gi|82908058|gb|ABB93218.1| homeobox transcription factor KN1 [Picea abies]
gi|82910342|gb|ABB94323.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910344|gb|ABB94324.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910346|gb|ABB94325.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910350|gb|ABB94327.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910352|gb|ABB94328.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910354|gb|ABB94329.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910356|gb|ABB94330.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910366|gb|ABB94335.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910368|gb|ABB94336.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910370|gb|ABB94337.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910372|gb|ABB94338.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910374|gb|ABB94339.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910376|gb|ABB94340.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910380|gb|ABB94342.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910382|gb|ABB94343.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910384|gb|ABB94344.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910386|gb|ABB94345.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910388|gb|ABB94346.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910390|gb|ABB94347.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910392|gb|ABB94348.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910394|gb|ABB94349.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910396|gb|ABB94350.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910398|gb|ABB94351.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910400|gb|ABB94352.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910402|gb|ABB94353.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910404|gb|ABB94354.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910408|gb|ABB94356.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910410|gb|ABB94357.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910412|gb|ABB94358.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910414|gb|ABB94359.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910416|gb|ABB94360.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910418|gb|ABB94361.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910420|gb|ABB94362.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910422|gb|ABB94363.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910424|gb|ABB94364.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910426|gb|ABB94365.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910428|gb|ABB94366.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910430|gb|ABB94367.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910432|gb|ABB94368.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910434|gb|ABB94369.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910436|gb|ABB94370.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910438|gb|ABB94371.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910444|gb|ABB94374.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910446|gb|ABB94375.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910448|gb|ABB94376.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910450|gb|ABB94377.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910452|gb|ABB94378.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910454|gb|ABB94379.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910458|gb|ABB94381.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910462|gb|ABB94383.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910464|gb|ABB94384.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910466|gb|ABB94385.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910468|gb|ABB94386.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910470|gb|ABB94387.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910472|gb|ABB94388.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910474|gb|ABB94389.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910480|gb|ABB94392.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910482|gb|ABB94393.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910484|gb|ABB94394.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910486|gb|ABB94395.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910488|gb|ABB94396.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910490|gb|ABB94397.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910492|gb|ABB94398.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910494|gb|ABB94399.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910496|gb|ABB94400.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910498|gb|ABB94401.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910500|gb|ABB94402.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910502|gb|ABB94403.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910504|gb|ABB94404.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910506|gb|ABB94405.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910514|gb|ABB94409.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910516|gb|ABB94410.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910520|gb|ABB94412.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910522|gb|ABB94413.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910524|gb|ABB94414.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910526|gb|ABB94415.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910528|gb|ABB94416.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910532|gb|ABB94418.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910536|gb|ABB94420.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910538|gb|ABB94421.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910540|gb|ABB94422.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910542|gb|ABB94423.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910544|gb|ABB94424.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910546|gb|ABB94425.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910548|gb|ABB94426.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910550|gb|ABB94427.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910552|gb|ABB94428.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910554|gb|ABB94429.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910556|gb|ABB94430.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910558|gb|ABB94431.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910560|gb|ABB94432.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910562|gb|ABB94433.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910568|gb|ABB94436.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910570|gb|ABB94437.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910572|gb|ABB94438.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910574|gb|ABB94439.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910576|gb|ABB94440.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910578|gb|ABB94441.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910582|gb|ABB94443.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910584|gb|ABB94444.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910586|gb|ABB94445.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910590|gb|ABB94447.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910592|gb|ABB94448.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910594|gb|ABB94449.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910596|gb|ABB94450.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910598|gb|ABB94451.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910600|gb|ABB94452.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910602|gb|ABB94453.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910604|gb|ABB94454.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910606|gb|ABB94455.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910608|gb|ABB94456.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910610|gb|ABB94457.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910612|gb|ABB94458.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910614|gb|ABB94459.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910616|gb|ABB94460.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910618|gb|ABB94461.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910620|gb|ABB94462.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910626|gb|ABB94465.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910628|gb|ABB94466.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910630|gb|ABB94467.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910632|gb|ABB94468.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910634|gb|ABB94469.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910636|gb|ABB94470.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910638|gb|ABB94471.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910640|gb|ABB94472.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910642|gb|ABB94473.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910644|gb|ABB94474.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910648|gb|ABB94476.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910650|gb|ABB94477.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910652|gb|ABB94478.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910656|gb|ABB94480.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910660|gb|ABB94482.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910662|gb|ABB94483.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910664|gb|ABB94484.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910666|gb|ABB94485.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910668|gb|ABB94486.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910670|gb|ABB94487.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910672|gb|ABB94488.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910676|gb|ABB94490.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910680|gb|ABB94492.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910682|gb|ABB94493.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910684|gb|ABB94494.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910688|gb|ABB94496.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910692|gb|ABB94498.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910694|gb|ABB94499.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910696|gb|ABB94500.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910698|gb|ABB94501.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910700|gb|ABB94502.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910702|gb|ABB94503.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910704|gb|ABB94504.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910706|gb|ABB94505.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910710|gb|ABB94507.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910712|gb|ABB94508.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910714|gb|ABB94509.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910716|gb|ABB94510.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910718|gb|ABB94511.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|82910360|gb|ABB94332.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910686|gb|ABB94495.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|82910442|gb|ABB94373.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910478|gb|ABB94391.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910510|gb|ABB94407.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910564|gb|ABB94434.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910566|gb|ABB94435.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910708|gb|ABB94506.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQTGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|82910378|gb|ABB94341.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA L+R + + V+ G
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-LTREYQNQQRRT-VSIGM-- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|82910358|gb|ABB94331.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910588|gb|ABB94446.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQTIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA L+R + + V+ G
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-LTREYQNQQRRT-VSIGM-- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|82910534|gb|ABB94419.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910622|gb|ABB94463.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910674|gb|ABB94489.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 4 NDQQNMQRLVLPTTSTNPPPPTWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDN 62
++Q M +P+ T + L N H Q + D P N S AS
Sbjct: 91 SEQAGMSDSSMPSVKTEVC--SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQAR 148
Query: 63 GRAE--------------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA 108
G A+ D E K++I+ HP Y LL A++ C +I P + + ++DA
Sbjct: 149 GEAQMIPSLDANSPHFNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA 208
Query: 109 QLSRSRDVLAKYSAVANGRVLDDKELDQFMTHYV 142
L+R + + V+ G D ELDQFM Y
Sbjct: 209 -LTREYQNQQRRT-VSIGM---DPELDQFMEAYC 237
>gi|66814032|ref|XP_641195.1| hypothetical protein DDB_G0280473 [Dictyostelium discoideum AX4]
gi|74997091|sp|Q54VB4.1|HBX9_DICDI RecName: Full=Homeobox protein 9; Short=DdHbx-9
gi|60469220|gb|EAL67215.1| hypothetical protein DDB_G0280473 [Dictyostelium discoideum AX4]
Length = 639
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLNSY 309
V I+++++ GKLPG+ TS+LK W H PYPT +A S F S +N++
Sbjct: 551 VPFTGSIVKRKKRGKLPGEATSILKKWLFEHNMHPYPT-EEEKVALANSTFLSFNQINNW 609
Query: 310 LV 311
Sbjct: 610 FT 611
>gi|82908034|gb|ABB93206.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA L+R + + V+ G
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-LTREYQNQQRRT-VSIGM-- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|55669493|gb|AAV54614.1| homeobox transcription factor KN4 [Pinus taeda]
Length = 268
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HP Y QLL+A++ C ++ P + + +D + ++ L ++S + V D E
Sbjct: 184 KSKIACHPHYPQLLTAYMDCQKVGAPPEVVTVLDEIIQENQ--LGRHSGTMDIGV--DPE 239
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVR 157
LDQFM Y +L + +L + +
Sbjct: 240 LDQFMEAYCQMLIKYHLELTKPFK 263
>gi|429345811|gb|AFZ84586.1| shoot meristemless-like protein, partial [Populus laurifolia]
Length = 72
Score = 44.7 bits (104), Expect = 0.055, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+ +C ++ P P++ A+L + A + G + +D LDQF
Sbjct: 1 MAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASIAPANTGCIGEDPALDQF 56
Query: 138 MTHYVLLLYSFKEQL 152
M Y +L ++++L
Sbjct: 57 MEAYCEMLTKYEQEL 71
>gi|82908976|gb|ABB93658.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908998|gb|ABB93669.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909052|gb|ABB93696.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|82909020|gb|ABB93680.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|82908952|gb|ABB93646.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908956|gb|ABB93648.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908960|gb|ABB93650.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908964|gb|ABB93652.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908966|gb|ABB93653.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908968|gb|ABB93654.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908970|gb|ABB93655.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908972|gb|ABB93656.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908974|gb|ABB93657.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908978|gb|ABB93659.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908980|gb|ABB93660.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908992|gb|ABB93666.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908994|gb|ABB93667.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909000|gb|ABB93670.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909004|gb|ABB93672.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909006|gb|ABB93673.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909014|gb|ABB93677.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909016|gb|ABB93678.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909018|gb|ABB93679.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909022|gb|ABB93681.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909024|gb|ABB93682.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909028|gb|ABB93684.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909030|gb|ABB93685.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909032|gb|ABB93686.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909046|gb|ABB93693.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|82909008|gb|ABB93674.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|25136573|gb|AAN65623.1| class I knotted-like homeodomain transcription factor [Populus
deltoides]
Length = 97
Score = 44.7 bits (104), Expect = 0.064, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 77 IVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQ 136
++ HP Y +LL+A+ +C ++ P P++ A+L + A + +D LDQ
Sbjct: 1 LMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEACASAASMGPANTDGIGEDPALDQ 56
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
FM Y +L ++++L + ++ EA++ +E ++LT
Sbjct: 57 FMEAYCEMLTKYEQELSKPLK----EAMVFLQRVECQFRALT 94
>gi|115605781|gb|ABJ15867.1| gamete-specific protein minus 1 [Chlamydomonas reinhardtii]
gi|154243353|gb|ABS71849.1| gamete-specific minus 1 [Chlamydomonas reinhardtii]
Length = 934
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L + Y ++V + + ++ + GKLP T LLK WW + WPYP+
Sbjct: 827 QLAASIAATYGSQLVQVAASLAQRPKVGKLPPAATQLLKGWWDDNFVWPYPS 878
>gi|60476414|gb|AAX21346.1| homeobox knotted-1-like protein KNOX2 [Lotus japonicus]
Length = 243
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 91 VSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--DKELDQFMTHYVLLLYSF 148
+ C +I P P++ A+L +R + + D ELDQFM Y +L +
Sbjct: 1 LDCQKIGAP----PEVVARLVAARQEFEARRRSSVSSRENSKDPELDQFMEAYYDMLVKY 56
Query: 149 KEQLQQHVRVHAMEAVMACWDLEQSLQSLTG-----VSPGESTGATMSDDDEDQVDSDTN 203
+E+L + ++ EA+ +E L L + + G S++D+D +T
Sbjct: 57 REELTRPIQ----EAMGFMRRIETQLNMLCSGPVRIFNDDKCEGVGSSEEDQDNSGGETE 112
Query: 204 FFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAG 263
P+ + P +R ELK L + Y + +++E+ K++ G
Sbjct: 113 L-------PE------IDPRAEDR--------ELKTHLLKKYSGYLSSLKQELSEKKKKG 151
Query: 264 KLPGDTTSLLKAWWLSHAKWPYPTVS 289
KLP D L WW H KWPYP+ S
Sbjct: 152 KLPKDARQKLLNWWELHYKWPYPSES 177
>gi|82908950|gb|ABB93645.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSPNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|82908954|gb|ABB93647.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908958|gb|ABB93649.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908962|gb|ABB93651.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908984|gb|ABB93662.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908986|gb|ABB93663.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908988|gb|ABB93664.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908990|gb|ABB93665.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908996|gb|ABB93668.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909002|gb|ABB93671.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909010|gb|ABB93675.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909012|gb|ABB93676.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909034|gb|ABB93687.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909036|gb|ABB93688.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909038|gb|ABB93689.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909040|gb|ABB93690.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909042|gb|ABB93691.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909044|gb|ABB93692.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909048|gb|ABB93694.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909050|gb|ABB93695.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K+ I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSRILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|30348874|gb|AAP31413.1|AF457124_1 knotted1-like homeodomain protein liguleless3 [Zea mays]
Length = 115
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRI-ATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I HP Y LLSA++ C ++ A P + + ++SR R A G + D
Sbjct: 42 KAQIASHPRYPSLLSAYIECRKVGAHP--HVTSLLEEVSRERRPDA-----GAGEIGVDP 94
Query: 133 ELDQFMTHYVLLLYSFKEQL 152
ELD+FM Y +L +KE+L
Sbjct: 95 ELDEFMDAYCRVLVRYKEEL 114
>gi|82908982|gb|ABB93661.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K+ I+ HP Y LL A++ C +I P + + ++DA ++ + ++
Sbjct: 170 EYAIKSRILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|19387168|gb|AAL87120.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
Length = 120
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRI-ATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA+I HP Y LLSA++ C ++ A P + + ++SR R A G + D
Sbjct: 42 KAQIASHPRYPSLLSAYIECRKVGAHP--HVTSLLEEVSRERRPDA-----GAGEIGVDP 94
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELD+FM Y +L +KE+L +
Sbjct: 95 ELDEFMDAYCRVLVRYKEELTR 116
>gi|55669497|gb|AAV54616.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 176 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 231
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVR 157
LDQFM Y +L + +L + +
Sbjct: 232 LDQFMEAYCQMLIKYHLELSKPFK 255
>gi|82908530|gb|ABB93454.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIASHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|89953338|gb|ABD83277.1| Fgenesh protein 18 [Beta vulgaris]
Length = 207
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 66 EDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN 125
+D + KA+I HP Y +LL A++ C ++ P ++ I ++ + D+ +
Sbjct: 70 DDNTSTSIKAKIASHPHYPRLLQAYIDCHKVGAP-PEIANILEEIKQENDMYRRDFGSLR 128
Query: 126 GRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
+ D ELD+FM Y +L +K L +
Sbjct: 129 TCLGTDPELDEFMETYCEILDKYKSDLSR 157
>gi|6016225|sp|P56667.1|KNX10_MAIZE RecName: Full=Homeobox protein knotted-1-like 10
gi|913143|gb|AAB33489.1| KNOX10=class 1 knotted1-like homeobox gene knox10 product
{homeodomain} [maize, Peptide Partial, 88 aa]
Length = 88
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LK+ L Y + + E+ RK++ GKLP D L WW H +WPYP+
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 55
>gi|224117982|ref|XP_002317704.1| predicted protein [Populus trichocarpa]
gi|222858377|gb|EEE95924.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 55 NNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATP--VDQLPKIDAQLSR 112
N +D+ + E K I HPLY L+ H+ CL++ T VD++P++ LS
Sbjct: 8 NTVGKDDDLLVDTAEAEALKKRISSHPLYGLLVQTHIDCLKVGTVGDVDRIPRVRPNLS- 66
Query: 113 SRDVLAKYSAVANGRVLDDKELDQFMTHYVL 143
N L ELD FM + L
Sbjct: 67 --------CQFPNPSSLSQPELDSFMVSHTL 89
>gi|55669495|gb|AAV54615.1| homeobox transcription factor KN4 [Pinus strobus]
Length = 262
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HP Y QLL+A++ C ++ P + + +D + ++ L ++S + V D E
Sbjct: 191 KSKIACHPHYPQLLAAYMDCQKVGAPPEVVTVLDDIIQENQ--LGRHSVTMDIGV--DPE 246
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 247 LDQFMEAYCQMLIKY 261
>gi|357640308|gb|AET87103.1| fused compound leaf 1 [Populus trichocarpa]
Length = 181
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 55 NNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATP--VDQLPKIDAQLSR 112
N +D+ + E K I HPLY L+ H+ CL++ T VD++P++ LS
Sbjct: 8 NTVGKDDDLLVDTAEAEALKKRISSHPLYGLLVQTHIDCLKVGTVGDVDRIPRVRPNLS- 66
Query: 113 SRDVLAKYSAVANGRVLDDKELDQFMTHYVL 143
N L ELD FM + L
Sbjct: 67 --------CQFPNPSSLSQPELDSFMVSHTL 89
>gi|82909026|gb|ABB93683.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Query: 25 TWLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNS-ASNDNGRAE--------------DWE 69
+ L N H Q + D P N S AS G A+ D E
Sbjct: 110 SGLRNQFEFHREQTGNCYTDQSSNTPVNPLVTSLASQARGEAQMIPSLDANSPHFNVDNE 169
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL 129
K++I+ HP Y LL A++ C +I P + + ++D ++ + ++
Sbjct: 170 EYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDVLTHEYQNQQRRTVSIGM---- 225
Query: 130 DDKELDQFMTHYV 142
D ELDQFM Y
Sbjct: 226 -DPELDQFMEAYC 237
>gi|413916170|gb|AFW56102.1| hypothetical protein ZEAMMB73_314479 [Zea mays]
Length = 182
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAK-YSAVANGRVLDD 131
KA+I+ HP Y LL+A++ ++ P P++ A+L+ +++V + + A+ +
Sbjct: 42 KAKIISHPHYYSLLAAYLEYNKVGAP----PEVSARLTEIAQEVETRQHMALGGLAATTE 97
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELDQFM Y +L F+E+L + ++ AME + +E L SL+ G S +S
Sbjct: 98 PELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMR---RVESQLNSLS--ISGRSLCNILS 151
Query: 192 DDDEDQVDSDTNF 204
+ + TN
Sbjct: 152 SGHWQKSATPTNI 164
>gi|82909664|gb|ABB94000.1| homeobox transcription factor KN4 [Picea mariana]
Length = 259
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 188 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 243
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 244 LDQFMEAYCQMLIKY 258
>gi|82912971|gb|ABB95620.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 190 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 245
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 246 LDQFMEAYCQMLIKY 260
>gi|82912867|gb|ABB95568.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 190 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 245
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 246 LDQFMEAYCQMLIKY 260
>gi|82912847|gb|ABB95558.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 190 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 245
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 246 LDQFMEAYCQMLIKY 260
>gi|82908562|gb|ABB93470.1| homeobox transcription factor KN4 [Picea abies]
gi|82912803|gb|ABB95536.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912819|gb|ABB95544.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913015|gb|ABB95642.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82912677|gb|ABB95473.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912679|gb|ABB95474.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912685|gb|ABB95477.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912687|gb|ABB95478.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912695|gb|ABB95482.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912697|gb|ABB95483.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912701|gb|ABB95485.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912703|gb|ABB95486.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912709|gb|ABB95489.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912729|gb|ABB95499.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912753|gb|ABB95511.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912755|gb|ABB95512.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912761|gb|ABB95515.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912777|gb|ABB95523.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912789|gb|ABB95529.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912791|gb|ABB95530.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912809|gb|ABB95539.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912813|gb|ABB95541.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912821|gb|ABB95545.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912823|gb|ABB95546.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912835|gb|ABB95552.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912837|gb|ABB95553.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912841|gb|ABB95555.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912849|gb|ABB95559.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912851|gb|ABB95560.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912855|gb|ABB95562.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912861|gb|ABB95565.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912873|gb|ABB95571.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912875|gb|ABB95572.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912877|gb|ABB95573.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912903|gb|ABB95586.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912905|gb|ABB95587.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912907|gb|ABB95588.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912911|gb|ABB95590.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912915|gb|ABB95592.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912919|gb|ABB95594.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912925|gb|ABB95597.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912927|gb|ABB95598.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912931|gb|ABB95600.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912937|gb|ABB95603.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912939|gb|ABB95604.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912941|gb|ABB95605.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912949|gb|ABB95609.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912951|gb|ABB95610.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912953|gb|ABB95611.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912955|gb|ABB95612.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912961|gb|ABB95615.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912975|gb|ABB95622.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912985|gb|ABB95627.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912999|gb|ABB95634.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913019|gb|ABB95644.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913025|gb|ABB95647.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913031|gb|ABB95650.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913033|gb|ABB95651.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913037|gb|ABB95653.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913057|gb|ABB95663.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 190 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 245
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 246 LDQFMEAYCQMLIKY 260
>gi|82912683|gb|ABB95476.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912705|gb|ABB95487.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912707|gb|ABB95488.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912711|gb|ABB95490.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912715|gb|ABB95492.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912723|gb|ABB95496.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912727|gb|ABB95498.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912737|gb|ABB95503.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912741|gb|ABB95505.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912749|gb|ABB95509.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912751|gb|ABB95510.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912763|gb|ABB95516.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912767|gb|ABB95518.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912769|gb|ABB95519.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912785|gb|ABB95527.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912795|gb|ABB95532.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912797|gb|ABB95533.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912799|gb|ABB95534.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912805|gb|ABB95537.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912807|gb|ABB95538.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912811|gb|ABB95540.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912833|gb|ABB95551.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912839|gb|ABB95554.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912869|gb|ABB95569.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912871|gb|ABB95570.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912887|gb|ABB95578.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912895|gb|ABB95582.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912897|gb|ABB95583.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912899|gb|ABB95584.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912901|gb|ABB95585.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912935|gb|ABB95602.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912943|gb|ABB95606.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912945|gb|ABB95607.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912957|gb|ABB95613.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912959|gb|ABB95614.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912965|gb|ABB95617.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912967|gb|ABB95618.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912969|gb|ABB95619.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912973|gb|ABB95621.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912983|gb|ABB95626.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913003|gb|ABB95636.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913009|gb|ABB95639.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913021|gb|ABB95645.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913029|gb|ABB95649.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913035|gb|ABB95652.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913039|gb|ABB95654.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913043|gb|ABB95656.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913047|gb|ABB95658.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913059|gb|ABB95664.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 190 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 245
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 246 LDQFMEAYCQMLIKY 260
>gi|82909622|gb|ABB93979.1| homeobox transcription factor KN4 [Picea mariana]
gi|82912681|gb|ABB95475.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912691|gb|ABB95480.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912693|gb|ABB95481.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912717|gb|ABB95493.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912719|gb|ABB95494.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912725|gb|ABB95497.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912733|gb|ABB95501.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912735|gb|ABB95502.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912739|gb|ABB95504.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912745|gb|ABB95507.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912747|gb|ABB95508.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912773|gb|ABB95521.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912783|gb|ABB95526.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912787|gb|ABB95528.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912793|gb|ABB95531.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912815|gb|ABB95542.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912817|gb|ABB95543.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912825|gb|ABB95547.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912829|gb|ABB95549.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912857|gb|ABB95563.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912865|gb|ABB95567.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912881|gb|ABB95575.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912883|gb|ABB95576.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912909|gb|ABB95589.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912921|gb|ABB95595.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912923|gb|ABB95596.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912929|gb|ABB95599.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912963|gb|ABB95616.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912977|gb|ABB95623.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912993|gb|ABB95631.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913011|gb|ABB95640.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913027|gb|ABB95648.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913045|gb|ABB95657.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913049|gb|ABB95659.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913055|gb|ABB95662.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 190 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 245
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 246 LDQFMEAYCQMLIKY 260
>gi|82908522|gb|ABB93450.1| homeobox transcription factor KN4 [Picea abies]
gi|82908526|gb|ABB93452.1| homeobox transcription factor KN4 [Picea abies]
gi|82908534|gb|ABB93456.1| homeobox transcription factor KN4 [Picea abies]
gi|82908536|gb|ABB93457.1| homeobox transcription factor KN4 [Picea abies]
gi|82908538|gb|ABB93458.1| homeobox transcription factor KN4 [Picea abies]
gi|82908546|gb|ABB93462.1| homeobox transcription factor KN4 [Picea abies]
gi|82908550|gb|ABB93464.1| homeobox transcription factor KN4 [Picea abies]
gi|82908552|gb|ABB93465.1| homeobox transcription factor KN4 [Picea abies]
gi|82908558|gb|ABB93468.1| homeobox transcription factor KN4 [Picea abies]
gi|82908560|gb|ABB93469.1| homeobox transcription factor KN4 [Picea abies]
gi|82908564|gb|ABB93471.1| homeobox transcription factor KN4 [Picea abies]
gi|82908568|gb|ABB93473.1| homeobox transcription factor KN4 [Picea abies]
gi|82908570|gb|ABB93474.1| homeobox transcription factor KN4 [Picea abies]
gi|82908578|gb|ABB93478.1| homeobox transcription factor KN4 [Picea abies]
gi|82908580|gb|ABB93479.1| homeobox transcription factor KN4 [Picea abies]
gi|82908584|gb|ABB93481.1| homeobox transcription factor KN4 [Picea abies]
gi|82908586|gb|ABB93482.1| homeobox transcription factor KN4 [Picea abies]
gi|82908588|gb|ABB93483.1| homeobox transcription factor KN4 [Picea abies]
gi|82908590|gb|ABB93484.1| homeobox transcription factor KN4 [Picea abies]
gi|82908602|gb|ABB93490.1| homeobox transcription factor KN4 [Picea abies]
gi|82908606|gb|ABB93492.1| homeobox transcription factor KN4 [Picea abies]
gi|82908610|gb|ABB93494.1| homeobox transcription factor KN4 [Picea abies]
gi|82909578|gb|ABB93957.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909582|gb|ABB93959.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909584|gb|ABB93960.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909586|gb|ABB93961.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909588|gb|ABB93962.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909590|gb|ABB93963.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909592|gb|ABB93964.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909594|gb|ABB93965.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909596|gb|ABB93966.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909600|gb|ABB93968.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909604|gb|ABB93970.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909606|gb|ABB93971.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909608|gb|ABB93972.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909610|gb|ABB93973.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909612|gb|ABB93974.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909614|gb|ABB93975.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909618|gb|ABB93977.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909620|gb|ABB93978.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909624|gb|ABB93980.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909626|gb|ABB93981.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909628|gb|ABB93982.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909630|gb|ABB93983.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909632|gb|ABB93984.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909634|gb|ABB93985.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909636|gb|ABB93986.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909638|gb|ABB93987.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909640|gb|ABB93988.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909642|gb|ABB93989.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909644|gb|ABB93990.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909646|gb|ABB93991.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909648|gb|ABB93992.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909650|gb|ABB93993.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909652|gb|ABB93994.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909654|gb|ABB93995.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909656|gb|ABB93996.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909658|gb|ABB93997.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909660|gb|ABB93998.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909662|gb|ABB93999.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909666|gb|ABB94001.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909668|gb|ABB94002.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909670|gb|ABB94003.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909672|gb|ABB94004.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909674|gb|ABB94005.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909676|gb|ABB94006.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909678|gb|ABB94007.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909680|gb|ABB94008.1| homeobox transcription factor KN4 [Picea mariana]
gi|82912689|gb|ABB95479.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912731|gb|ABB95500.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912743|gb|ABB95506.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912757|gb|ABB95513.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912759|gb|ABB95514.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912801|gb|ABB95535.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912831|gb|ABB95550.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912853|gb|ABB95561.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912879|gb|ABB95574.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912885|gb|ABB95577.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912891|gb|ABB95580.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912913|gb|ABB95591.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912947|gb|ABB95608.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912979|gb|ABB95624.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912981|gb|ABB95625.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912989|gb|ABB95629.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913005|gb|ABB95637.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913007|gb|ABB95638.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913023|gb|ABB95646.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82912775|gb|ABB95522.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912779|gb|ABB95524.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912917|gb|ABB95593.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913001|gb|ABB95635.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82912781|gb|ABB95525.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912889|gb|ABB95579.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913041|gb|ABB95655.1| homeobox transcription factor KN4 [Picea glauca]
Length = 258
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 187 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 242
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 243 LDQFMEAYCQMLIKY 257
>gi|82908520|gb|ABB93449.1| homeobox transcription factor KN4 [Picea abies]
gi|82908528|gb|ABB93453.1| homeobox transcription factor KN4 [Picea abies]
gi|82908544|gb|ABB93461.1| homeobox transcription factor KN4 [Picea abies]
gi|82908548|gb|ABB93463.1| homeobox transcription factor KN4 [Picea abies]
gi|82908554|gb|ABB93466.1| homeobox transcription factor KN4 [Picea abies]
gi|82908556|gb|ABB93467.1| homeobox transcription factor KN4 [Picea abies]
gi|82908574|gb|ABB93476.1| homeobox transcription factor KN4 [Picea abies]
gi|82908576|gb|ABB93477.1| homeobox transcription factor KN4 [Picea abies]
gi|82908582|gb|ABB93480.1| homeobox transcription factor KN4 [Picea abies]
gi|82908592|gb|ABB93485.1| homeobox transcription factor KN4 [Picea abies]
gi|82908596|gb|ABB93487.1| homeobox transcription factor KN4 [Picea abies]
gi|82908598|gb|ABB93488.1| homeobox transcription factor KN4 [Picea abies]
gi|82908608|gb|ABB93493.1| homeobox transcription factor KN4 [Picea abies]
gi|82912933|gb|ABB95601.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82908524|gb|ABB93451.1| homeobox transcription factor KN4 [Picea abies]
gi|82908532|gb|ABB93455.1| homeobox transcription factor KN4 [Picea abies]
gi|82908542|gb|ABB93460.1| homeobox transcription factor KN4 [Picea abies]
gi|82908566|gb|ABB93472.1| homeobox transcription factor KN4 [Picea abies]
gi|82908572|gb|ABB93475.1| homeobox transcription factor KN4 [Picea abies]
gi|82908594|gb|ABB93486.1| homeobox transcription factor KN4 [Picea abies]
gi|82908604|gb|ABB93491.1| homeobox transcription factor KN4 [Picea abies]
gi|82909580|gb|ABB93958.1| homeobox transcription factor KN4 [Picea mariana]
gi|82912713|gb|ABB95491.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912721|gb|ABB95495.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912765|gb|ABB95517.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912771|gb|ABB95520.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912827|gb|ABB95548.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912843|gb|ABB95556.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912845|gb|ABB95557.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912859|gb|ABB95564.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912863|gb|ABB95566.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912893|gb|ABB95581.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912987|gb|ABB95628.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912991|gb|ABB95630.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912995|gb|ABB95632.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912997|gb|ABB95633.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913013|gb|ABB95641.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913017|gb|ABB95643.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913051|gb|ABB95660.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913053|gb|ABB95661.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82912699|gb|ABB95484.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82908540|gb|ABB93459.1| homeobox transcription factor KN4 [Picea abies]
gi|82908600|gb|ABB93489.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|55669487|gb|AAV54611.1| homeobox transcription factor KN3 [Pinus strobus]
Length = 290
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I+ H Y +L++A++ C ++ P P++ ++L V V D E
Sbjct: 213 RAKIIAHVHYPRLVAAYIDCQKVGAP----PEVVSELDDLSHKCQTQQCVPTISVGADPE 268
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 269 LDQFMEAYCEMFIKYQEEL 287
>gi|262479299|gb|ACY68674.1| Pth12 [Cladonia grayi]
Length = 130
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 239 HELKQGYKEKIVDIREE----ILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
H+ + GY + E + +RR G LP DTT +LK W+ H PYPT
Sbjct: 23 HQYQNGYAHGSMQFEPEDMGNXMPRRRRGNLPRDTTDMLKQWFAXHLAHPYPT 75
>gi|82909598|gb|ABB93967.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909602|gb|ABB93969.1| homeobox transcription factor KN4 [Picea mariana]
Length = 260
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|82909616|gb|ABB93976.1| homeobox transcription factor KN4 [Picea mariana]
Length = 260
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 244
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 245 LDQFMEAYCQMLIKY 259
>gi|164661513|ref|XP_001731879.1| hypothetical protein MGL_1147 [Malassezia globosa CBS 7966]
gi|159105780|gb|EDP44665.1| hypothetical protein MGL_1147 [Malassezia globosa CBS 7966]
Length = 469
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLN 307
++ + E+ + +R GKLP T +LK W L HA PYPT + + + IC ++
Sbjct: 385 QMANSSEQPVPPKRGGKLPKHITDMLKTWLLDHADHPYPTEEEKRAFCDFTGLD-ICQIS 443
Query: 308 SYLV 311
++ V
Sbjct: 444 NWFV 447
>gi|55669499|gb|AAV54617.1| homeobox transcription factor KN4 [Picea glauca]
Length = 248
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K +I HP Y QLL+A++ C +I P + + +D ++S+ + L ++ A + V D E
Sbjct: 177 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQ-ENQLGRHLATMDIGV--DPE 232
Query: 134 LDQFMTHYVLLLYSF 148
LDQFM Y +L +
Sbjct: 233 LDQFMEAYCQMLIKY 247
>gi|125570067|gb|EAZ11582.1| hypothetical protein OsJ_01446 [Oryza sativa Japonica Group]
Length = 144
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
DEDQ +T+ D + E L + HELK L + Y + +R
Sbjct: 6 DEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKYSGCLSRLR 48
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 49 SEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 82
>gi|330827596|ref|XP_003291859.1| hypothetical protein DICPUDRAFT_39700 [Dictyostelium purpureum]
gi|325077920|gb|EGC31601.1| hypothetical protein DICPUDRAFT_39700 [Dictyostelium purpureum]
Length = 130
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 257 LRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
L++++ GKLPG+ TS+LK W H PYPT
Sbjct: 49 LKRKKRGKLPGEATSILKKWLFEHNMHPYPT 79
>gi|115605783|gb|ABJ15868.1| gamete-specific protein minus 1 [Chlamydomonas incerta]
Length = 892
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+L + Y ++V + + ++ + KLP LL AWW H WPYPT
Sbjct: 784 QLAASIAATYGSQLVQVAVNLAQRPKVAKLPEAARRLLTAWWEQHFVWPYPT 835
>gi|62530887|gb|AAX85665.1| transcription factor DANDEKNOX1 [Taraxacum officinale]
Length = 175
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 29/157 (18%)
Query: 135 DQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST----GATM 190
DQFM Y +L ++++L + + EA++ +E ++++ SP +S G
Sbjct: 1 DQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAIS-FSPSDSGCGEGGMDR 55
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
+ E+ +D D N LV ++E S ELK +L + Y +
Sbjct: 56 NGSSEEDLDVDVNN-------------NNLVDPQAEES-------ELKGQLLRKYSGYLG 95
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 96 SLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 132
>gi|31323453|gb|AAP47028.1|AF375969_1 knox-like homeodomain protein 1 [Solanum lycopersicum]
Length = 168
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 45 DEEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLP 104
DEE+ KN+ S S G E + K +I H LY L+ H+ CL++ + ++
Sbjct: 8 DEEQ--KNHYYYSNSTSPGLLSSLEDEEIKRKICCHSLYGLLVQTHLDCLKVCLGITEID 65
Query: 105 KIDAQ-----------LSRSRDVLAKYSAVANGRVLDD-KELDQFMTHYVLLLYSFKEQL 152
KID + +S + D + + + +D ELD FM Y + L KE +
Sbjct: 66 KIDQKTEEKSAKCNKVISHTMDHQTELNNKFSSLTMDQPAELDNFMEAYCVALSKLKEAM 125
Query: 153 QQ 154
++
Sbjct: 126 EE 127
>gi|40218227|gb|AAR83015.1| putative Kn1-like homeobox protein [Populus tremula x Populus alba]
Length = 186
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 31/163 (19%)
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL------TGVSPGE 184
D ELDQFM Y +L ++E+L + ++ EA+ +E L + S +
Sbjct: 1 DPELDQFMGAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHGPLRIFNSDDK 56
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+DD+D +T P+ + P +R ELK+ L +
Sbjct: 57 SEGVGSSEDDQDNSGGETEL-------PE------IDPRAEDR--------ELKNHLLRK 95
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 96 YSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 138
>gi|350540074|ref|NP_001234378.1| PETROSELINUM [Solanum lycopersicum]
gi|169647565|gb|ACA61779.1| PETROSELINUM [Solanum lycopersicum]
Length = 171
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 46 EEEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPK 105
++E KN+ S S G E + K +I H LY L+ H+ CL++ + ++ K
Sbjct: 10 KDEEQKNHYYYSNSTSPGLLSSLEDEEIKRKICCHSLYGLLVQTHLDCLKVCLGITEIDK 69
Query: 106 IDAQ-----------LSRSRDVLAKYSAVANGRVLDD-KELDQFMTHYVLLLYSFKEQLQ 153
ID + +S + D + + + +D ELD FM Y + L KE ++
Sbjct: 70 IDQKTEEKSAKCNKVISHTMDHQTELNNKFSSLTMDQPAELDNFMEAYCVALSKLKEAME 129
Query: 154 Q 154
+
Sbjct: 130 E 130
>gi|393705671|gb|AFN17081.1| knotted1, partial [Panicum virgatum]
Length = 109
Score = 42.0 bits (97), Expect = 0.39, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C + PV P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKERPPVGAPPEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 60
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 61 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 96
>gi|30348875|gb|AAP31414.1|AF457125_1 knotted1-like homeodomain protein liguleless3 [Zea mays]
Length = 146
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
HELK L + Y + +R E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 32 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 84
>gi|328876965|gb|EGG25328.1| homeobox transcription factor [Dictyostelium fasciculatum]
Length = 586
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 255 EILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++L+K+R GKLPG+ TS+LK W H PYPT
Sbjct: 493 QMLKKKR-GKLPGEATSILKNWLYQHNNNPYPT 524
>gi|4887614|dbj|BAA77820.1| HOS16 [Oryza sativa Japonica Group]
Length = 138
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
HELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 24 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 76
>gi|393705436|gb|AFN16964.1| knotted1, partial [Panicum amarum]
Length = 105
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--------RSRDVLAKYSAVANGRVLDDK 132
P Y LL+A++ C ++ P P++ A+L+ R R L AV +
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAVT------EP 50
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAME 162
ELDQFM Y +L F+E+L + ++ AME
Sbjct: 51 ELDQFMEAYHEMLVKFREELTRPLQ-EAME 79
>gi|15667545|dbj|BAB68273.1| transcription factor OSH3 [Oryza meridionalis]
Length = 159
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN-GRVLDDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A ++ DD
Sbjct: 69 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASHMPPAPDDP 128
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELDQFM Y LL KE+L +
Sbjct: 129 ELDQFMEDYCKLLVECKEELSR 150
>gi|393705529|gb|AFN17010.1| knotted1, partial [Panicum gouinii]
gi|393705551|gb|AFN17021.1| knotted1, partial [Panicum pedersenii]
gi|393705589|gb|AFN17040.1| knotted1, partial [Panicum stramineum]
Length = 105
Score = 41.6 bits (96), Expect = 0.55, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLS-RSRDVLAKYSAVANGR-VLDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ ++++ A+ A G + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRAALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705569|gb|AFN17030.1| knotted1, partial [Panicum racemosum]
gi|393705575|gb|AFN17033.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L FKE+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFKEELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|315307485|gb|ADU04146.1| hypothetical protein [Gossypium hirsutum]
Length = 161
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I HPLY +LL AH+ C ++ TP P I L + + + V D +
Sbjct: 79 RAKIASHPLYPKLLQAHIDCHKLGTP----PGIATMLDETGGAGERGLDLVPCSVDADPQ 134
Query: 134 LDQFMTHYVLLLYS 147
LD FM L L S
Sbjct: 135 LDHFMVFPFLPLLS 148
>gi|393705472|gb|AFN16982.1| knotted1, partial [Panicum aquaticum]
Length = 105
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELETRQRTALGGIGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVETQLSSLS 92
>gi|82909392|gb|ABB93866.1| homeobox transcription factor KN3 [Picea mariana]
Length = 284
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ H Y +L++A++ ++ P D + ++D +LS+ VA + D E
Sbjct: 210 KAKIIAHVHYPRLVAAYIDYQKVGAPPDVVSELD-ELSQK---CHAQQCVATISIGADPE 265
Query: 134 LDQFMTHYVLLLYSFKEQL 152
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|388852058|emb|CCF54234.1| uncharacterized protein [Ustilago hordei]
Length = 733
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLNSYLVLN---VVA 316
RR GKLP T LLK+W L HA PYPT S +++ N ++ ++
Sbjct: 643 RRRGKLPKPVTDLLKSWLLEHASHPYPTEDEKRSLCSMTGLTLSQVSNWFINARRRILLP 702
Query: 317 GGRQGKIGAGNGLAIKA 333
G G G +KA
Sbjct: 703 TGANGSPGGSTAAQVKA 719
>gi|393705763|gb|AFN17127.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 41.2 bits (95), Expect = 0.72, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELGARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705559|gb|AFN17025.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 41.2 bits (95), Expect = 0.76, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLQCQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L FKE+L + ++ EA +E L SL+
Sbjct: 57 EAYHEMLVKFKEELTRPLQ----EATEFMRRVESQLSSLS 92
>gi|393705567|gb|AFN17029.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 41.2 bits (95), Expect = 0.77, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMQKVESQLSSLS 92
>gi|225453414|ref|XP_002272026.1| PREDICTED: homeobox protein knotted-1-like 6-like [Vitis vinifera]
Length = 229
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 63 GRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR--DVLAKY 120
G + D + + +I HPLY +LL A++ C ++ P P++ L R L +
Sbjct: 70 GGSGDEVSSAIRTQIATHPLYPKLLHAYIECQKVGAP----PEVAYLLEEIRRGSELCRR 125
Query: 121 SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
+ V+ + D ELD+FM Y +L +K L +
Sbjct: 126 NTVSTC-LGADPELDEFMETYCNVLMKYKSDLAR 158
>gi|393705543|gb|AFN17017.1| knotted1, partial [Panicum olyroides]
Length = 105
Score = 40.8 bits (94), Expect = 0.87, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAME 162
Y +L F+E+L + ++ AME
Sbjct: 57 EAYHEMLVKFREELTRPLQ-EAME 79
>gi|393705711|gb|AFN17101.1| knotted1, partial [Panicum virgatum]
gi|393705727|gb|AFN17109.1| knotted1, partial [Panicum virgatum]
gi|393705733|gb|AFN17112.1| knotted1, partial [Panicum virgatum]
gi|393705809|gb|AFN17150.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.8 bits (94), Expect = 0.89, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGALGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705571|gb|AFN17031.1| knotted1, partial [Panicum racemosum]
gi|393705577|gb|AFN17034.1| knotted1, partial [Panicum racemosum]
gi|393705629|gb|AFN17060.1| knotted1, partial [Panicum urvilleanum]
gi|393705633|gb|AFN17062.1| knotted1, partial [Panicum urvilleanum]
Length = 105
Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ AME + +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ-EAMEFMQR---VESQLSSLS 92
>gi|331212317|ref|XP_003307428.1| hypothetical protein PGTG_00378 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403158091|ref|XP_003890810.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309297831|gb|EFP74422.1| hypothetical protein PGTG_00378 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163675|gb|EHS62493.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 684
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 255 EILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E RR GKLP T++LK W ++H PYPT
Sbjct: 391 ETQAPRRRGKLPSAVTAILKGWLMAHTTHPYPT 423
>gi|393705627|gb|AFN17059.1| knotted1, partial [Urochloa plantaginea]
Length = 105
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGSATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRKVESQLNSLS 92
>gi|393705545|gb|AFN17018.1| knotted1, partial [Panicum olyroides]
Length = 105
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELARPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705464|gb|AFN16978.1| knotted1, partial [Panicum amarum var. amarulum]
Length = 105
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSAKLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705751|gb|AFN17121.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQQLEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705482|gb|AFN16987.1| knotted1, partial [Panicum campestre]
gi|393705486|gb|AFN16989.1| knotted1, partial [Panicum cayennense]
gi|393705488|gb|AFN16990.1| knotted1, partial [Panicum cervicatum]
gi|393705581|gb|AFN17036.1| knotted1, partial [Panicum rudgei]
Length = 105
Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705490|gb|AFN16991.1| knotted1, partial [Panicum chloroleucum]
gi|393705496|gb|AFN16994.1| knotted1, partial [Panicum chloroleucum]
gi|393705502|gb|AFN16997.1| knotted1, partial [Panicum chloroleucum]
gi|393705506|gb|AFN16999.1| knotted1, partial [Panicum chloroleucum]
gi|393705533|gb|AFN17012.1| knotted1, partial [Panicum mystasipum]
gi|393705541|gb|AFN17016.1| knotted1, partial [Panicum olyroides]
gi|393705593|gb|AFN17042.1| knotted1, partial [Panicum tricholaenoides]
gi|393705595|gb|AFN17043.1| knotted1, partial [Panicum tricholaenoides]
gi|393705599|gb|AFN17045.1| knotted1, partial [Panicum tricholaenoides]
gi|393705603|gb|AFN17047.1| knotted1, partial [Panicum tricholaenoides]
gi|393705607|gb|AFN17049.1| knotted1, partial [Panicum tricholaenoides]
gi|393705611|gb|AFN17051.1| knotted1, partial [Panicum tricholaenoides]
gi|393705613|gb|AFN17052.1| knotted1, partial [Panicum tricholaenoides]
gi|393705637|gb|AFN17064.1| knotted1, partial [Panicum virgatum]
gi|393705659|gb|AFN17075.1| knotted1, partial [Panicum virgatum]
gi|393705673|gb|AFN17082.1| knotted1, partial [Panicum virgatum]
gi|393705677|gb|AFN17084.1| knotted1, partial [Panicum virgatum]
gi|393705679|gb|AFN17085.1| knotted1, partial [Panicum virgatum]
gi|393705687|gb|AFN17089.1| knotted1, partial [Panicum virgatum]
gi|393705697|gb|AFN17094.1| knotted1, partial [Panicum virgatum]
gi|393705703|gb|AFN17097.1| knotted1, partial [Panicum virgatum]
gi|393705741|gb|AFN17116.1| knotted1, partial [Panicum virgatum]
gi|393705755|gb|AFN17123.1| knotted1, partial [Panicum virgatum]
gi|393705765|gb|AFN17128.1| knotted1, partial [Panicum virgatum]
gi|393705771|gb|AFN17131.1| knotted1, partial [Panicum virgatum]
gi|393705775|gb|AFN17133.1| knotted1, partial [Panicum virgatum]
gi|393705783|gb|AFN17137.1| knotted1, partial [Panicum virgatum]
gi|393705785|gb|AFN17138.1| knotted1, partial [Panicum virgatum]
gi|393705793|gb|AFN17142.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|357529158|gb|AET80767.1| shoot meristemless, partial [Distictis buccinatoria]
gi|357529164|gb|AET80769.1| shoot meristemless, partial [Dolichandra unguis-cati]
Length = 156
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+++C +I P + + +++ +L + + + S G V +D LDQF
Sbjct: 92 MAHPHYPRLLAAYLNCQKIGAPPEVVARLE-ELCATSATMGRNSG-GGGIVGEDPALDQF 149
Query: 138 MTHYV 142
M Y
Sbjct: 150 MEAYC 154
>gi|393705404|gb|AFN16948.1| knotted1, partial [Panicum amarum]
gi|393705406|gb|AFN16949.1| knotted1, partial [Panicum amarum]
gi|393705412|gb|AFN16952.1| knotted1, partial [Panicum amarum]
gi|393705416|gb|AFN16954.1| knotted1, partial [Panicum amarum]
gi|393705424|gb|AFN16958.1| knotted1, partial [Panicum amarum]
gi|393705428|gb|AFN16960.1| knotted1, partial [Panicum amarum]
gi|393705434|gb|AFN16963.1| knotted1, partial [Panicum amarum]
gi|393705438|gb|AFN16965.1| knotted1, partial [Panicum amarum]
gi|393705444|gb|AFN16968.1| knotted1, partial [Panicum amarum]
gi|393705446|gb|AFN16969.1| knotted1, partial [Panicum amarum]
gi|393705452|gb|AFN16972.1| knotted1, partial [Panicum amarum]
gi|393705456|gb|AFN16974.1| knotted1, partial [Panicum amarum]
gi|393705460|gb|AFN16976.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705470|gb|AFN16981.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705474|gb|AFN16983.1| knotted1, partial [Panicum aquaticum]
gi|393705476|gb|AFN16984.1| knotted1, partial [Panicum aquaticum]
gi|393705478|gb|AFN16985.1| knotted1, partial [Panicum bergii]
gi|393705480|gb|AFN16986.1| knotted1, partial [Panicum bergii]
gi|393705484|gb|AFN16988.1| knotted1, partial [Panicum capillare]
gi|393705492|gb|AFN16992.1| knotted1, partial [Panicum chloroleucum]
gi|393705494|gb|AFN16993.1| knotted1, partial [Panicum chloroleucum]
gi|393705498|gb|AFN16995.1| knotted1, partial [Panicum chloroleucum]
gi|393705504|gb|AFN16998.1| knotted1, partial [Panicum chloroleucum]
gi|393705508|gb|AFN17000.1| knotted1, partial [Panicum chloroleucum]
gi|393705512|gb|AFN17002.1| knotted1, partial [Panicum virgatum var. cubense]
gi|393705514|gb|AFN17003.1| knotted1, partial [Panicum virgatum var. cubense]
gi|393705516|gb|AFN17004.1| knotted1, partial [Panicum dichotomiflorum]
gi|393705518|gb|AFN17005.1| knotted1, partial [Panicum dichotomiflorum]
gi|393705520|gb|AFN17006.1| knotted1, partial [Panicum elephantipes]
gi|393705522|gb|AFN17007.1| knotted1, partial [Panicum elephantipes]
gi|393705525|gb|AFN17008.1| knotted1, partial [Panicum gouinii]
gi|393705527|gb|AFN17009.1| knotted1, partial [Panicum gouinii]
gi|393705539|gb|AFN17015.1| knotted1, partial [Panicum nephelophilum]
gi|393705549|gb|AFN17020.1| knotted1, partial [Panicum pedersenii]
gi|393705553|gb|AFN17022.1| knotted1, partial [Panicum pedersenii]
gi|393705563|gb|AFN17027.1| knotted1, partial [Panicum racemosum]
gi|393705573|gb|AFN17032.1| knotted1, partial [Panicum racemosum]
gi|393705579|gb|AFN17035.1| knotted1, partial [Panicum racemosum]
gi|393705587|gb|AFN17039.1| knotted1, partial [Panicum stramineum]
gi|393705597|gb|AFN17044.1| knotted1, partial [Panicum tricholaenoides]
gi|393705601|gb|AFN17046.1| knotted1, partial [Panicum tricholaenoides]
gi|393705605|gb|AFN17048.1| knotted1, partial [Panicum tricholaenoides]
gi|393705609|gb|AFN17050.1| knotted1, partial [Panicum tricholaenoides]
gi|393705615|gb|AFN17053.1| knotted1, partial [Panicum tricholaenoides]
gi|393705617|gb|AFN17054.1| knotted1, partial [Panicum tricholaenoides]
gi|393705619|gb|AFN17055.1| knotted1, partial [Panicum aff. aquaticum JKT-2012]
gi|393705621|gb|AFN17056.1| knotted1, partial [Panicum aff. aquaticum JKT-2012]
gi|393705623|gb|AFN17057.1| knotted1, partial [Panicum aff. aquaticum JKT-2012]
gi|393705625|gb|AFN17058.1| knotted1, partial [Panicum aff. aquaticum JKT-2012]
gi|393705631|gb|AFN17061.1| knotted1, partial [Panicum urvilleanum]
gi|393705635|gb|AFN17063.1| knotted1, partial [Panicum urvilleanum]
gi|393705639|gb|AFN17065.1| knotted1, partial [Panicum virgatum]
gi|393705649|gb|AFN17070.1| knotted1, partial [Panicum virgatum]
gi|393705657|gb|AFN17074.1| knotted1, partial [Panicum virgatum]
gi|393705663|gb|AFN17077.1| knotted1, partial [Panicum virgatum]
gi|393705669|gb|AFN17080.1| knotted1, partial [Panicum virgatum]
gi|393705675|gb|AFN17083.1| knotted1, partial [Panicum virgatum]
gi|393705681|gb|AFN17086.1| knotted1, partial [Panicum virgatum]
gi|393705683|gb|AFN17087.1| knotted1, partial [Panicum virgatum]
gi|393705685|gb|AFN17088.1| knotted1, partial [Panicum virgatum]
gi|393705689|gb|AFN17090.1| knotted1, partial [Panicum virgatum]
gi|393705695|gb|AFN17093.1| knotted1, partial [Panicum virgatum]
gi|393705699|gb|AFN17095.1| knotted1, partial [Panicum virgatum]
gi|393705701|gb|AFN17096.1| knotted1, partial [Panicum virgatum]
gi|393705705|gb|AFN17098.1| knotted1, partial [Panicum virgatum]
gi|393705707|gb|AFN17099.1| knotted1, partial [Panicum virgatum]
gi|393705713|gb|AFN17102.1| knotted1, partial [Panicum virgatum]
gi|393705719|gb|AFN17105.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705721|gb|AFN17106.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705725|gb|AFN17108.1| knotted1, partial [Panicum virgatum]
gi|393705731|gb|AFN17111.1| knotted1, partial [Panicum virgatum]
gi|393705739|gb|AFN17115.1| knotted1, partial [Panicum virgatum]
gi|393705747|gb|AFN17119.1| knotted1, partial [Panicum virgatum]
gi|393705753|gb|AFN17122.1| knotted1, partial [Panicum virgatum]
gi|393705757|gb|AFN17124.1| knotted1, partial [Panicum virgatum]
gi|393705761|gb|AFN17126.1| knotted1, partial [Panicum virgatum]
gi|393705769|gb|AFN17130.1| knotted1, partial [Panicum virgatum]
gi|393705773|gb|AFN17132.1| knotted1, partial [Panicum virgatum]
gi|393705779|gb|AFN17135.1| knotted1, partial [Panicum virgatum]
gi|393705781|gb|AFN17136.1| knotted1, partial [Panicum virgatum]
gi|393705787|gb|AFN17139.1| knotted1, partial [Panicum virgatum]
gi|393705791|gb|AFN17141.1| knotted1, partial [Panicum virgatum]
gi|393705797|gb|AFN17144.1| knotted1, partial [Panicum virgatum]
gi|393705799|gb|AFN17145.1| knotted1, partial [Panicum virgatum]
gi|393705801|gb|AFN17146.1| knotted1, partial [Panicum virgatum]
gi|393705805|gb|AFN17148.1| knotted1, partial [Panicum virgatum]
gi|393705811|gb|AFN17151.1| knotted1, partial [Panicum virgatum]
gi|393705815|gb|AFN17153.1| knotted1, partial [Panicum virgatum]
gi|393705821|gb|AFN17156.1| knotted1, partial [Panicum virgatum]
gi|393705829|gb|AFN17160.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705767|gb|AFN17129.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEAQQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|406864515|gb|EKD17560.1| homeobox domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 443
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT +L+AW++SH + PYP+
Sbjct: 315 RKRR-GNLPKETTDILRAWFMSHLQHPYPS 343
>gi|393705432|gb|AFN16962.1| knotted1, partial [Panicum amarum]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELETRQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705537|gb|AFN17014.1| knotted1, partial [Panicum mystasipum]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHGMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705655|gb|AFN17073.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLTSLS 92
>gi|393705547|gb|AFN17019.1| knotted1, partial [Cenchrus compressus]
gi|393705585|gb|AFN17038.1| knotted1, partial [Setaria palmifolia]
gi|393705591|gb|AFN17041.1| knotted1, partial [Setaria viridis]
Length = 105
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 92
>gi|3327273|dbj|BAA31700.1| short product from PKn2 alternative splicing [Ipomoea nil]
Length = 237
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 30/157 (19%)
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
D ELD+FM Y +L +K L + EA +E L +L + +GA
Sbjct: 57 DPELDEFMETYYDMLVKYKSDLSKPFH----EATTFLNTIETQLSNLCK----DESGAVS 108
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD+++ ++D + S+ + +LK+ L + Y +
Sbjct: 109 SDEEDSGGETDIQ----------------------QESITKTEERQLKNTLLRKYGSHLS 146
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 147 SLKLEFSKKKKKGKLPKEARQTLLDWWSDHYKWPYPT 183
>gi|393705555|gb|AFN17023.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAALTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ AME + +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ-EAMEFMQR---VESQLSSLS 92
>gi|388493974|gb|AFK35053.1| unknown [Lotus japonicus]
Length = 183
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 226 ERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPY 285
E S M + ELK L + Y + +R+E L+KR+ GKLP D L WW +H +WPY
Sbjct: 70 EYSGMRQGDQELKEMLLRKYGGYLSSLRKEFLKKRKKGKLPKDARKTLTDWWNTHYRWPY 129
Query: 286 PT 287
PT
Sbjct: 130 PT 131
>gi|15667543|dbj|BAB68272.1| transcription factor OSH3 [Oryza glaberrima]
gi|15667547|dbj|BAB68274.1| transcription factor OSH3 [Oryza barthii]
Length = 161
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 57 SASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATP-VDQLPKIDAQLSRSRD 115
+ + GRA KA IV HP Y +LL+A + C ++ P A R
Sbjct: 54 ATRDGGGRAAGVLDDPVKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREAR 113
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
A +A +D ELDQFM Y LL KE+L +
Sbjct: 114 QRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSR 152
>gi|393705651|gb|AFN17071.1| knotted1, partial [Panicum virgatum]
gi|393705743|gb|AFN17117.1| knotted1, partial [Panicum virgatum]
gi|393705819|gb|AFN17155.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTALAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705535|gb|AFN17013.1| knotted1, partial [Panicum mystasipum]
Length = 105
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDA----QLSRSRDVLAKYSAVANGRVLDDKELDQ 136
P Y LL+A++ C ++ P + ++ A Q +R R L A + ELDQ
Sbjct: 1 PHYYSLLAAYLECQKVGAPPEVSARLTAMTQEQEARQRTALGGLGAAT------EPELDQ 54
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
FM Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 55 FMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|15667549|dbj|BAB68275.1| transcription factor OSH3 [Oryza glumipatula]
Length = 161
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 57 SASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATP-VDQLPKIDAQLSRSRD 115
+ + GRA KA IV HP Y +LL+A + C ++ P A R
Sbjct: 54 ATRDGGGRAAGVLDDPVKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREAR 113
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
A +A +D ELDQFM Y LL KE+L +
Sbjct: 114 QRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSR 152
>gi|393705422|gb|AFN16957.1| knotted1, partial [Panicum amarum]
Length = 105
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATELELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|15667575|dbj|BAB68288.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667597|dbj|BAB68299.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667607|dbj|BAB68304.1| transcription factor OSH3 [Oryza rufipogon]
gi|15667611|dbj|BAB68306.1| transcription factor OSH3 [Oryza rufipogon]
gi|15667613|dbj|BAB68307.1| transcription factor OSH3 [Oryza rufipogon]
Length = 161
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 57 SASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATP-VDQLPKIDAQLSRSRD 115
+ + GRA KA IV HP Y +LL+A + C ++ P A R
Sbjct: 54 ATRDGGGRAAGVLDDPVKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREAR 113
Query: 116 VLAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQ 154
A +A +D ELDQFM Y LL KE+L +
Sbjct: 114 QRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSR 152
>gi|402077264|gb|EJT72613.1| hypothetical protein GGTG_09473 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 494
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+L+H + PYPT
Sbjct: 363 RKRR-GNLPKETTDKLRAWFLAHLQHPYPT 391
>gi|393705717|gb|AFN17104.1| knotted1, partial [Panicum amarum var. amarulum]
Length = 105
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAME 162
Y +L F+E+L + ++ AME
Sbjct: 57 EAYHEMLVKFREELTRPLQ-EAME 79
>gi|393705402|gb|AFN16947.1| knotted1, partial [Panicum amarum]
gi|393705408|gb|AFN16950.1| knotted1, partial [Panicum amarum]
gi|393705410|gb|AFN16951.1| knotted1, partial [Panicum amarum]
gi|393705420|gb|AFN16956.1| knotted1, partial [Panicum amarum]
gi|393705426|gb|AFN16959.1| knotted1, partial [Panicum amarum]
gi|393705430|gb|AFN16961.1| knotted1, partial [Panicum amarum]
gi|393705440|gb|AFN16966.1| knotted1, partial [Panicum amarum]
gi|393705442|gb|AFN16967.1| knotted1, partial [Panicum amarum]
gi|393705448|gb|AFN16970.1| knotted1, partial [Panicum amarum]
gi|393705450|gb|AFN16971.1| knotted1, partial [Panicum amarum]
gi|393705458|gb|AFN16975.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705462|gb|AFN16977.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705468|gb|AFN16980.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705510|gb|AFN17001.1| knotted1, partial [Panicum virgatum var. cubense]
gi|393705641|gb|AFN17066.1| knotted1, partial [Panicum virgatum]
gi|393705643|gb|AFN17067.1| knotted1, partial [Panicum virgatum]
gi|393705645|gb|AFN17068.1| knotted1, partial [Panicum virgatum]
gi|393705653|gb|AFN17072.1| knotted1, partial [Panicum virgatum]
gi|393705661|gb|AFN17076.1| knotted1, partial [Panicum virgatum]
gi|393705667|gb|AFN17079.1| knotted1, partial [Panicum virgatum]
gi|393705693|gb|AFN17092.1| knotted1, partial [Panicum virgatum]
gi|393705709|gb|AFN17100.1| knotted1, partial [Panicum virgatum]
gi|393705715|gb|AFN17103.1| knotted1, partial [Panicum amarum var. amarulum]
gi|393705723|gb|AFN17107.1| knotted1, partial [Panicum virgatum]
gi|393705729|gb|AFN17110.1| knotted1, partial [Panicum virgatum]
gi|393705735|gb|AFN17113.1| knotted1, partial [Panicum virgatum]
gi|393705745|gb|AFN17118.1| knotted1, partial [Panicum virgatum]
gi|393705749|gb|AFN17120.1| knotted1, partial [Panicum virgatum]
gi|393705759|gb|AFN17125.1| knotted1, partial [Panicum virgatum]
gi|393705777|gb|AFN17134.1| knotted1, partial [Panicum virgatum]
gi|393705795|gb|AFN17143.1| knotted1, partial [Panicum virgatum]
gi|393705803|gb|AFN17147.1| knotted1, partial [Panicum virgatum]
gi|393705807|gb|AFN17149.1| knotted1, partial [Panicum virgatum]
gi|393705813|gb|AFN17152.1| knotted1, partial [Panicum virgatum]
gi|393705817|gb|AFN17154.1| knotted1, partial [Panicum virgatum]
gi|393705823|gb|AFN17157.1| knotted1, partial [Panicum virgatum]
gi|393705825|gb|AFN17158.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAME 162
Y +L F+E+L + ++ AME
Sbjct: 57 EAYHEMLVKFREELTRPLQ-EAME 79
>gi|356574087|ref|XP_003555183.1| PREDICTED: RNA polymerase II-associated protein 3-like [Glycine
max]
Length = 507
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK L + Y + +R+E L+KR+ GKLP D +L WW +H +WPYPT
Sbjct: 402 QELKEMLLRKYGGYLSSLRKEFLKKRKKGKLPKDARMILMDWWNTHYRWPYPT 454
>gi|71003940|ref|XP_756636.1| hypothetical protein UM00489.1 [Ustilago maydis 521]
gi|46095576|gb|EAK80809.1| hypothetical protein UM00489.1 [Ustilago maydis 521]
Length = 957
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RR GKLP T LLK W L HA PYPT
Sbjct: 870 RRRGKLPKPVTDLLKTWLLEHASHPYPT 897
>gi|358398154|gb|EHK47512.1| hypothetical protein TRIATDRAFT_255946 [Trichoderma atroviride IMI
206040]
Length = 178
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+E RE RKRR G LP DTT L+AW+ H PYPT
Sbjct: 36 QEPATPARETRSRKRR-GNLPRDTTDKLRAWFDDHLSHPYPT 76
>gi|393705500|gb|AFN16996.1| knotted1, partial [Panicum chloroleucum]
Length = 105
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ AME + +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ-GAMEFMRR---VESQLSSLS 92
>gi|398257710|gb|AFO71866.1| STM-like protein 2, partial [Capnoides sempervirens]
Length = 145
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 31/135 (22%)
Query: 162 EAVMACWDLEQSLQSLTGVSP------GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSM 215
EA++ +E ++LT SP GE+ S D++ VD+ N+ D
Sbjct: 15 EAMLFLSRIEAQFKALTVTSPSDNSACGEAVNQNGSSDED--VDASENYID--------- 63
Query: 216 GFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKA 275
P +R ELK +L + Y + +++E L+KR+ GKLP + L
Sbjct: 64 ------PQAEDR--------ELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQQLLD 109
Query: 276 WWLSHAKWPYPTVSR 290
WW H KWPYP+ S+
Sbjct: 110 WWSRHYKWPYPSESQ 124
>gi|393705557|gb|AFN17024.1| knotted1, partial [Panicum racemosum]
gi|393705561|gb|AFN17026.1| knotted1, partial [Panicum racemosum]
Length = 107
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLS--------RSRDVLAKYSAVANGRVLDDK 132
P Y LL+A++ C ++ P P++ A+L+ R R L A +
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATE----PEP 52
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 53 ELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMQRVESQLSSLS 94
>gi|323508027|emb|CBQ67898.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 715
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RR GKLP T LLK W L HA PYPT
Sbjct: 628 RRRGKLPKPVTDLLKTWLLEHASHPYPT 655
>gi|50846082|gb|AAT84993.1| shoot meristemless-like protein [Chelidonium majus]
Length = 159
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 32/158 (20%)
Query: 137 FMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD---- 192
FM Y +L ++++L + + EA++ +E ++LT S +S G D
Sbjct: 1 FMEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQFKALTVSSSSDSVGHDAVDRNGS 56
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
DED V++ N+ D P +R L K +L + Y + +
Sbjct: 57 SDED-VEASDNYID---------------PQAEDRVL--------KGQLLRKYSGYLGSL 92
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
++E L+KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 93 KQEFLKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQ 130
>gi|393705665|gb|AFN17078.1| knotted1, partial [Panicum virgatum]
gi|393705691|gb|AFN17091.1| knotted1, partial [Panicum virgatum]
gi|393705737|gb|AFN17114.1| knotted1, partial [Panicum virgatum]
gi|393705789|gb|AFN17140.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C + P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKFGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705531|gb|AFN17011.1| knotted1, partial [Panicum miliaceum]
Length = 105
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLVAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|297734598|emb|CBI16649.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSR--DVLAKYSAVANGRVLDD 131
+ +I HPLY +LL A++ C ++ P P++ L R L + + V+ + D
Sbjct: 22 RTQIATHPLYPKLLHAYIECQKVGAP----PEVAYLLEEIRRGSELCRRNTVSTC-LGAD 76
Query: 132 KELDQFMTHYVLLLYSFKEQLQQ 154
ELD+FM Y +L +K L +
Sbjct: 77 PELDEFMETYCNVLMKYKSDLAR 99
>gi|326497911|dbj|BAJ94818.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
HELK L + Y + +R E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 35 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPT 87
>gi|298709323|emb|CBJ31259.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 259
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 256 ILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
I RKR K +TTS+L W+L+H +WPYP N
Sbjct: 96 ISRKRVFSKYDEETTSILTEWFLAHKRWPYPASKEKN 132
>gi|315307479|gb|ADU04141.1| hypothetical protein [Gossypium hirsutum]
Length = 161
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
+A+I HPLY +LL AH+ C ++ TP P I L + + V D +
Sbjct: 79 RAKIASHPLYPKLLQAHIDCHKVGTP----PAIATILDEMGGADERGLDLVPCSVDADPQ 134
Query: 134 LDQFMTHYVLLLYS 147
LD FM L L S
Sbjct: 135 LDHFMVFPFLPLLS 148
>gi|400601610|gb|EJP69253.1| homeobox domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 372
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 217 FGPLVPTE-SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKA 275
F P P ERS R+ L H+ + + ++ I + +++R G LP +TT L++
Sbjct: 216 FMPTPPARLEERSPFAPSRYGL-HDGGRYNEMGMMGISGDTKQRKRRGNLPKETTDKLRS 274
Query: 276 WWLSHAKWPYPT 287
W+++H + PYPT
Sbjct: 275 WFIAHLQHPYPT 286
>gi|389639346|ref|XP_003717306.1| hypothetical protein MGG_12865 [Magnaporthe oryzae 70-15]
gi|189086522|gb|ACD75718.1| Apf2p [Magnaporthe grisea]
gi|351643125|gb|EHA50987.1| hypothetical protein MGG_12865 [Magnaporthe oryzae 70-15]
Length = 470
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+L+H PYPT
Sbjct: 343 RKRR-GNLPKETTDKLRAWFLAHLSHPYPT 371
>gi|67005921|gb|AAY62596.1| Pth12p [Magnaporthe grisea]
gi|440472973|gb|ELQ41801.1| hypothetical protein OOU_Y34scaffold00253g2 [Magnaporthe oryzae
Y34]
gi|440484080|gb|ELQ64235.1| hypothetical protein OOW_P131scaffold00694g1 [Magnaporthe oryzae
P131]
Length = 447
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+L+H PYPT
Sbjct: 320 RKRR-GNLPKETTDKLRAWFLAHLSHPYPT 348
>gi|156379385|ref|XP_001631438.1| predicted protein [Nematostella vectensis]
gi|156218478|gb|EDO39375.1| predicted protein [Nematostella vectensis]
Length = 288
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLNSYLVLNVVAGG 318
K + G LP TS++K W H PYPT S IA +I +N++ + N
Sbjct: 198 KSKRGVLPKQATSIMKTWLFQHIMHPYPTEDEKRS-IAQQTNLTILQVNNWFI-NARRRI 255
Query: 319 RQGKIGAGNGLAIKANK 335
Q + AGN A KA K
Sbjct: 256 LQPMLDAGNPEAHKAKK 272
>gi|393705583|gb|AFN17037.1| knotted1, partial [Setaria palmifolia]
Length = 105
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLA--KYSAVANGRVLDDKELDQFM 138
P Y LL A++ C ++ P P++ A+L+ L + +A++ + ELDQFM
Sbjct: 1 PHYYSLLVAYLECQKVGAP----PEVSARLTAMAQELEARQRTALSGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 92
>gi|346971244|gb|EGY14696.1| Pth12p [Verticillium dahliae VdLs.17]
Length = 418
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H + PYPT
Sbjct: 291 RKRR-GNLPKETTDKLRAWFVAHLQHPYPT 319
>gi|393705466|gb|AFN16979.1| knotted1, partial [Panicum amarum var. amarulum]
Length = 105
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSAKLTAMAQELEARQRTALGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQ 154
Y +L F+E+L +
Sbjct: 57 EAYHEMLVKFREELTR 72
>gi|328863463|gb|EGG12562.1| hypothetical protein MELLADRAFT_86714 [Melampsora larici-populina
98AG31]
Length = 692
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RR GKLP T+LL+ W +SH PYPT
Sbjct: 432 RRRGKLPQAVTALLRNWLMSHTSHPYPT 459
>gi|242023223|ref|XP_002432035.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517393|gb|EEB19297.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 804
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 230 MERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAK---WPYP 286
+E++R +L+ E ++ Y EK+ +I +E RKR+ GKL D +++W++ H K +P
Sbjct: 254 IEKIRRKLQDEYQKDY-EKLNEIEKESCRKRKEGKLIEDMIDEIRSWYM-HVKNQTGKFP 311
Query: 287 TVSRTNSCIAISLFNSICTLNSYLVLNVVAGG 318
+ +S + +F S + L+ GG
Sbjct: 312 EIPSDDSGGSALIFRSSSRQGTETSLSKSTGG 343
>gi|297601619|ref|NP_001051139.2| Os03g0727000 [Oryza sativa Japonica Group]
gi|255674861|dbj|BAF13053.2| Os03g0727000 [Oryza sativa Japonica Group]
Length = 195
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
V ELKH L + Y + +++E+ +K++ GKLP D L WW H KWPYP+ S+
Sbjct: 73 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQ-K 131
Query: 293 SCIAISLFNSICTLNSYLV 311
+A S + +N++ +
Sbjct: 132 VALAESTGLDLKQINNWFI 150
>gi|393705565|gb|AFN17028.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQF
Sbjct: 1 PHYYSLLAAYLQCQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFT 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L FKE+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFKEELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|20530672|gb|AAM27190.1|AF457121_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
Length = 151
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 36 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 87
>gi|30348870|gb|AAP31412.1|AF457123_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
Length = 148
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 34 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 85
>gi|393705414|gb|AFN16953.1| knotted1, partial [Panicum amarum]
gi|393705418|gb|AFN16955.1| knotted1, partial [Panicum amarum]
gi|393705454|gb|AFN16973.1| knotted1, partial [Panicum amarum]
Length = 105
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L + G + + ELDQFM
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTSLGGLGAATEPELDQFM 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAME 162
Y +L F+E+L + ++ AME
Sbjct: 57 EAYHEMLVKFREELTRPLQ-EAME 79
>gi|408397126|gb|EKJ76276.1| PTH12 [Fusarium pseudograminearum CS3096]
Length = 441
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H + PYPT
Sbjct: 311 RKRR-GNLPKETTDKLRAWFVAHLQHPYPT 339
>gi|414878841|tpg|DAA55972.1| TPA: hypothetical protein ZEAMMB73_650053 [Zea mays]
Length = 290
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 18/19 (94%)
Query: 139 THYVLLLYSFKEQLQQHVR 157
THYVLLL SFKEQLQQHV+
Sbjct: 35 THYVLLLCSFKEQLQQHVQ 53
>gi|302903104|ref|XP_003048785.1| hypothetical protein NECHADRAFT_47076 [Nectria haematococca mpVI
77-13-4]
gi|256729719|gb|EEU43072.1| hypothetical protein NECHADRAFT_47076 [Nectria haematococca mpVI
77-13-4]
Length = 412
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H + PYPT
Sbjct: 280 RKRR-GNLPKETTDKLRAWFVAHLQHPYPT 308
>gi|357529161|gb|AET80768.1| shoot meristemless, partial [Bignonia callistegioides]
Length = 156
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+++C + P + + +++ +L + + + S G V +D LDQF
Sbjct: 92 MAHPHYPRLLAAYLNCQKTGAPPEVVARLE-ELCATSATMGRNSG-GGGIVGEDPALDQF 149
Query: 138 MTHYV 142
M Y
Sbjct: 150 MEAYC 154
>gi|357640302|gb|AET87100.1| fused compound leaf 2 [Glycine max]
Length = 168
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIA--TPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
K I HPLY L+ AH+ CL++ + +++ KID + + L +S
Sbjct: 45 KRRISNHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQATEKQNLGMFS---------Q 95
Query: 132 KELDQFMTHYVLLLYSFKEQL 152
ELD FM Y L L KE +
Sbjct: 96 SELDLFMEAYCLALGKLKEAM 116
>gi|326427937|gb|EGD73507.1| hypothetical protein PTSG_05211 [Salpingoeca sp. ATCC 50818]
Length = 582
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
R+R+ LP TT++LKAW H PYPT
Sbjct: 191 RRRKRSNLPKSTTNMLKAWLFDHHHHPYPT 220
>gi|428168762|gb|EKX37703.1| hypothetical protein GUITHDRAFT_77932 [Guillardia theta CCMP2712]
Length = 83
Score = 38.5 bits (88), Expect = 4.5, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y K+ +++ E KRR LP + + W+ HA PYPT
Sbjct: 5 YGSKVEELQRECANKRRRANLPESAVEIFRTWFRQHAAHPYPT 47
>gi|46122195|ref|XP_385651.1| hypothetical protein FG05475.1 [Gibberella zeae PH-1]
Length = 443
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H + PYPT
Sbjct: 313 RKRR-GNLPKETTDKLRAWFVAHLQHPYPT 341
>gi|443922996|gb|ELU42327.1| homeobox KN domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 237
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+RR GKLP T L+ W LSHA PYPT
Sbjct: 36 QRRRGKLPKHVTETLRTWLLSHADHPYPT 64
>gi|15667541|dbj|BAB68271.1| transcription factor OSH3 [Oryza rufipogon]
Length = 163
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP-VDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA IV HP Y +LL+A + C ++ P A R A +A +D
Sbjct: 73 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 132
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELDQFM Y LL KE+L +
Sbjct: 133 ELDQFMEDYCKLLVECKEELSR 154
>gi|171686576|ref|XP_001908229.1| hypothetical protein [Podospora anserina S mat+]
gi|170943249|emb|CAP68902.1| unnamed protein product [Podospora anserina S mat+]
Length = 373
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E RKRR G LP +TT L+AW+++H PYPT
Sbjct: 238 ENKQRKRR-GNLPKETTDKLRAWFVAHLHHPYPT 270
>gi|357640300|gb|AET87099.1| fused compound leaf 1 [Glycine max]
Length = 169
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIA--TPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
K I HPLY L+ AH+ CL++ + +++ KID + + L +S
Sbjct: 45 KRRISNHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQATEKQNLGMFS---------Q 95
Query: 132 KELDQFMTHYVLLLYSFKEQL 152
ELD FM Y L L KE +
Sbjct: 96 SELDLFMEAYCLALGKLKEAM 116
>gi|15667589|dbj|BAB68295.1| transcription factor OSH3 [Oryza sativa Indica Group]
Length = 164
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP-VDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA IV HP Y +LL+A + C ++ P A R A +A +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAETAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELDQFM Y LL KE+L +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSR 155
>gi|15667551|dbj|BAB68276.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667553|dbj|BAB68277.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667555|dbj|BAB68278.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667557|dbj|BAB68279.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667559|dbj|BAB68280.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667561|dbj|BAB68281.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667563|dbj|BAB68282.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667565|dbj|BAB68283.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667567|dbj|BAB68284.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667569|dbj|BAB68285.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667571|dbj|BAB68286.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667573|dbj|BAB68287.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667577|dbj|BAB68289.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667579|dbj|BAB68290.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667581|dbj|BAB68291.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667583|dbj|BAB68292.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667585|dbj|BAB68293.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667587|dbj|BAB68294.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667591|dbj|BAB68296.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667593|dbj|BAB68297.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667595|dbj|BAB68298.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667599|dbj|BAB68300.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667601|dbj|BAB68301.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667603|dbj|BAB68302.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667605|dbj|BAB68303.1| transcription factor OSH3 [Oryza rufipogon]
Length = 164
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATP-VDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KA IV HP Y +LL+A + C ++ P A R A +A +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELDQFM Y LL KE+L +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSR 155
>gi|6746351|gb|AAF27529.1| knotted-1 homeobox protein [Aegilops longissima]
Length = 41
Score = 38.5 bits (88), Expect = 5.0, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 263 GKLPGDTTSLLKAWWLSHAKWPYPTVS 289
GKLP D L WW +H +WPYPT++
Sbjct: 2 GKLPKDARLALVDWWNTHYRWPYPTIN 28
>gi|4336768|gb|AAD17941.1| knotted 1 homolog [Santalum album]
Length = 58
Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ GKLP + + L WW +H +WPYPT
Sbjct: 1 KKKGKLPENAKTTLLDWWSTHYRWPYPT 28
>gi|353241501|emb|CCA73312.1| hypothetical protein PIIN_07267 [Piriformospora indica DSM 11827]
Length = 528
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+RR GKLP T LK W L+H PYPT
Sbjct: 282 QRRRGKLPKPVTEFLKKWLLAHTDHPYPT 310
>gi|342879086|gb|EGU80360.1| hypothetical protein FOXB_09108 [Fusarium oxysporum Fo5176]
Length = 412
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H + PYPT
Sbjct: 282 RKRR-GNLPKETTDKLRAWFVAHLQHPYPT 310
>gi|398257716|gb|AFO71869.1| STM-like protein 1, partial [Capnoides sempervirens]
Length = 140
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 24/138 (17%)
Query: 153 QQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGP 212
+Q + EA++ +E L+ LT ++ S A ++ E+++D+ F D
Sbjct: 6 EQELTKPFQEAMLFFSSIESQLKGLT-IASSSSDSAGLNGSSEEELDATDGFID------ 58
Query: 213 DSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSL 272
P +R ELK +L + Y + +++E ++KR+ GKLP +
Sbjct: 59 ---------PRAEDR--------ELKVKLLRKYSGYLGSLKQEFMKKRKKGKLPKNARQQ 101
Query: 273 LKAWWLSHAKWPYPTVSR 290
L WW H KWPYP+ S+
Sbjct: 102 LLDWWSRHYKWPYPSESQ 119
>gi|15667609|dbj|BAB68305.1| transcription factor OSH3 [Oryza rufipogon]
Length = 164
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN-GRVLDDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPTPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQ 154
ELDQFM Y LL KE+L +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSR 155
>gi|429860689|gb|ELA35415.1| homeodomain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 410
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H PYPT
Sbjct: 284 RKRR-GNLPKETTDKLRAWFVAHLHHPYPT 312
>gi|380490069|emb|CCF36273.1| homeobox domain-containing protein [Colletotrichum higginsianum]
Length = 407
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H PYPT
Sbjct: 281 RKRR-GNLPKETTDKLRAWFVAHLHHPYPT 309
>gi|15341495|gb|AAK95645.1| KNAP2-like protein [Malus x domestica]
Length = 76
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
ND+ E KA+I+ HP Y LL A++ C R+ P D + ++
Sbjct: 13 NDDHSLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARL 59
>gi|310789492|gb|EFQ25025.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
Length = 403
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
RKRR G LP +TT L+AW+++H PYPT
Sbjct: 277 RKRR-GNLPKETTDKLRAWFVAHLHHPYPT 305
>gi|414872574|tpg|DAA51131.1| TPA: knotted1 [Zea mays]
Length = 193
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTN 292
V ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+ ++
Sbjct: 73 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQ-K 131
Query: 293 SCIAISLFNSICTLNSYLV 311
+A S + +N++ +
Sbjct: 132 VALAESTGLDLKQINNWFI 150
>gi|393705827|gb|AFN17159.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 37.7 bits (86), Expect = 7.1, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 81 PLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV--LDDKELDQFM 138
P Y LL+A++ C ++ P P++ A+L+ L A G + + ELDQF
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATEPELDQFT 56
Query: 139 THYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLT 178
Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 57 EAYHEMLVKFREELTRPLQ----EAMEFMRRVESRLSSLS 92
>gi|426195879|gb|EKV45808.1| hypothetical protein AGABI2DRAFT_224104 [Agaricus bisporus var.
bisporus H97]
Length = 632
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++R+ GKLP +TT LKAW H+ PYP+
Sbjct: 364 QQRKRGKLPKETTDFLKAWLHRHSDHPYPS 393
>gi|409078971|gb|EKM79333.1| hypothetical protein AGABI1DRAFT_106860 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 613
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 258 RKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++R+ GKLP +TT LKAW H+ PYP+
Sbjct: 364 QQRKRGKLPKETTDFLKAWLHRHSDHPYPS 393
>gi|242807242|ref|XP_002484914.1| homeobox transcription factor, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715539|gb|EED14961.1| homeobox transcription factor, putative [Talaromyces stipitatus
ATCC 10500]
Length = 328
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 259 KRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KRR G LP + T +L+AW+ H PYPT
Sbjct: 234 KRRRGNLPKNVTDVLRAWFHEHLDHPYPT 262
>gi|371538813|gb|AEX34736.1| shoot meristemless-like protein, partial [Populus laurifolia]
Length = 95
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 260 RRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
R+ GKLP + L WW H KWPYP+ S+
Sbjct: 1 RKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 31
>gi|33333538|gb|AAQ11885.1| knotted 8 [Hordeum vulgare]
Length = 82
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 235 HELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
HELK L + Y + +R E L+K + GKLP D L WW +H +WPYPT
Sbjct: 30 HELKEMLLKKYSGCLSRLRSEFLKKXKKGKLPKDARLALMDWWNTHYRWPYPT 82
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,895,621,026
Number of Sequences: 23463169
Number of extensions: 264450662
Number of successful extensions: 1437171
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 329
Number of HSP's that attempted gapping in prelim test: 1430346
Number of HSP's gapped (non-prelim): 5275
length of query: 335
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 192
effective length of database: 9,003,962,200
effective search space: 1728760742400
effective search space used: 1728760742400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)