BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019840
(335 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/223 (80%), Positives = 200/223 (89%), Gaps = 6/223 (2%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV---A 124
W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+ A
Sbjct: 154 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA 213
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE
Sbjct: 214 QGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 273
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
GATMSDD+++QV+SD N FDG L D +GFGPL+PTESERSLMERVR ELKHELKQG
Sbjct: 274 GMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQG 330
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
YKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 331 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/221 (85%), Positives = 205/221 (92%), Gaps = 1/221 (0%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 158 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 217
Query: 128 V-LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV+PGE T
Sbjct: 218 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 277
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQ DSDTNF DG DGPDSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 278 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 337
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 338 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 378
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/226 (78%), Positives = 202/226 (89%), Gaps = 6/226 (2%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 115 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 174
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 175 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 234
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 235 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 291
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPT
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/221 (81%), Positives = 202/221 (91%)
Query: 67 DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANG 126
+W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ NG
Sbjct: 161 NWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNG 220
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
V DDKELDQFM +YVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 221 MVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 280
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
ATMSDD++DQVDSD N FD ++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYK
Sbjct: 281 SATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYK 340
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPT
Sbjct: 341 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+CKAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+A DD
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDD 166
Query: 132 -KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATM
Sbjct: 167 GRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 226
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD ++DQ DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++
Sbjct: 227 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 284
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
DIREEILRKRRAGKLPGDTTS LKAWW SHAKWPYPT
Sbjct: 285 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 321
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/225 (73%), Positives = 192/225 (85%), Gaps = 4/225 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
EDW + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS +
Sbjct: 110 GEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL- 168
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V+D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQSLTGVSP E
Sbjct: 169 -GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSE 227
Query: 185 STGATMSDDDED-QVDSDTNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELK 242
S G TMSDD++D QV+S+ N FDGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELK
Sbjct: 228 SNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELK 287
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QG+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPT
Sbjct: 288 QGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/215 (74%), Positives = 181/215 (84%), Gaps = 2/215 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA SA A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSD
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 162
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQGYKEK+VDI
Sbjct: 163 DEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDI 221
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
REEILRKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 222 REEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 256
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 315 bits (806), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 183/225 (81%), Gaps = 8/225 (3%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE + KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA +A A
Sbjct: 44 WE--REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAA 101
Query: 128 VLDD-----KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP 182
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SP
Sbjct: 102 AAGGAPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASP 161
Query: 183 GESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELK 242
E +GATMSDD+++QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELK
Sbjct: 162 REGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELK 220
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
QGY+EK+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 221 QGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 286 bits (733), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 28 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 87
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 88 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 147
Query: 192 DDDED---QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 148 EDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSR 206
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 207 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 173/220 (78%), Gaps = 5/220 (2%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+Y+QLL+AHV+CLR+ATP+DQLP I+AQLS S +L Y++ A G D
Sbjct: 30 QMKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFSHHD 89
Query: 132 K-ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATM
Sbjct: 90 RQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATM 149
Query: 191 SDDDED-QVD--SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
S+D++D Q+D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K
Sbjct: 150 SEDEDDLQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKS 208
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPT
Sbjct: 209 RIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 248
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 165/216 (76%), Gaps = 2/216 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS
Sbjct: 114 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 173
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 174 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 233
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+REEILRKRRAGKLPGDTT++LK WW H+KWPYPT
Sbjct: 234 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 269
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
VR ELKHELKQGY++K+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPT
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 55
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 52
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPT
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 52
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 48/55 (87%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
VR ELK ELKQG+K +I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPT
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPT 55
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLKEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA ++ L +L +G + +T AT S
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATHS 155
Query: 192 DD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
D+ DEDQ +T+ D + E L + HELK L + Y
Sbjct: 156 DEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKYS 198
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 199 GCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 73/232 (31%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P DVL K +AV + LD+
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPP--------------DVLTKLTAVPAAQQLDEA 128
Query: 133 -----------------ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+LDQFM Y +L ++E+L++ + +EA +E L
Sbjct: 129 DGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLD 184
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH 235
SL S E TG++ +E+Q SD
Sbjct: 185 SLA-ESNCEGTGSS----EEEQDPSDK--------------------------------- 206
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LKH+L + Y + D+R+ ++ + GKLP + L WW H KWPYP+
Sbjct: 207 QLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 258
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y LL A++ C R+ P D + ++ ++R +
Sbjct: 119 NDDHSLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLS--VARQEFEARQ 176
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 177 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 232
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +E+Q +S G + P+ + P +R
Sbjct: 233 NNNAPPLRIFSPSEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--- 278
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+ S
Sbjct: 279 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 332
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 31/236 (13%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 87 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 140
Query: 113 SRDVLAKYSAVANG-RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ G + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 141 AQEVEARQRTALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQL 199
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 200 NSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEVDAHGVD------------------ 240
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+
Sbjct: 241 ---QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 34/239 (14%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y L+ A++ C R+ P D +P++ ++R +
Sbjct: 120 NDDHSLSSNEVEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLS--VARQEFEARQ 177
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 178 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 233
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +++Q +S G + P+ + P +R
Sbjct: 234 NNNAPPLRIFSPSEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--- 279
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
ELK+ L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+ S
Sbjct: 280 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSES 333
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 34/246 (13%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P P++
Sbjct: 87 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEV 137
Query: 107 DAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 138 SARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAM 193
Query: 165 MACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTE 224
+E L SL+ + +EDQ S G + P+ G
Sbjct: 194 EFLRRVETQLNSLSISGRSLRNILSTGSSEEDQEGSG-----GETELPEIDAHG------ 242
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
V ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWP
Sbjct: 243 --------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWP 294
Query: 285 YPTVSR 290
YP+ S+
Sbjct: 295 YPSESQ 300
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA + L SL G +P +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPT-----D 162
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+ DE S+ G D D FG E L + HELK L + Y +
Sbjct: 163 NSDEMVGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSR 212
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 213 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 248
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA + L SL G +P +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPT-----D 162
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+ DE S+ G D D FG E L + HELK L + Y +
Sbjct: 163 NSDEMVGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSR 212
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 213 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 248
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 38/248 (15%)
Query: 51 KNNKNNSASNDNGRAEDWETVKC-KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
+N+ ++S G A E ++ KA+I+ HP LL A++ C ++ P P++ A+
Sbjct: 71 RNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVAAR 126
Query: 110 LSRSRDVLA--KYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
LS R + ++ + V D ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 127 LSAVRQEFEARQRRSLTDRDVSKDPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFM 182
Query: 168 WDLEQSLQSLTGV------SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLV 221
+E L L S + G S++D+D +T P+ +
Sbjct: 183 QKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDNSGGETEL-------PE------ID 229
Query: 222 PTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHA 281
P +R ELK+ L + Y + +++E+ +K++ GKLP D L WW H
Sbjct: 230 PRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHY 281
Query: 282 KWPYPTVS 289
KWPYP+ S
Sbjct: 282 KWPYPSES 289
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 191
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C QS + G
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLC----QSPIHILNNPDG 246
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S SD++++ N G + P+ + P +R ELK+ L +
Sbjct: 247 KSDNMGSSDEEQE------NNSGGETELPE------IDPRAEDR--------ELKNHLLK 286
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVS 289
Y + +++E+ +K++ GKLP + L WW H KWPYP+ S
Sbjct: 287 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 332
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
ET KA+I+ HPLY LL A + C ++ P P++ +LS + + + A R
Sbjct: 58 ETDAIKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSA---LAGELDSRAEDRY 110
Query: 129 L----DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
L D ELD+FM Y+ +L S++++L + ++ EA ++E + S T +
Sbjct: 111 LQGQSSDPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFT-LDDNG 165
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+D+++ D S G + +E ELK L
Sbjct: 166 SEGGNSSEDEQEAGGGDMA----------SAGLPEITSPCAED-------KELKSHLLNK 208
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + + E+ +K++ GKLP D L WW H +WPYP+
Sbjct: 209 YSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPS 251
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 30/219 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + +++ + + + +A + + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GESTGATMS 191
LDQFM Y +L ++++L + ++ EA++ +E ++LT S + G +
Sbjct: 185 LDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDFASNEGGDRN 240
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
E+ VD N D P +R +LK +L + Y +
Sbjct: 241 GSSEEDVDLH-NMID---------------PQAEDR--------DLKGQLLRKYSGYLGS 276
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WW H KWPYP+ S+
Sbjct: 277 LKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQ 315
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSAVANGRVLD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + +A+
Sbjct: 104 IKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLELRQRTALGVLGAAT 159
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELDQFM Y +L ++E+L + ++ AME + + + + S++G S +
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLRRV-ETQLNTLSISGRSLRNILSSGS 217
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S++D++ +T + G D ELKH L + Y +
Sbjct: 218 SEEDQEGSGGETELPEIDAHGVD---------------------QELKHHLLKKYSGYLS 256
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E+ +K++ GKLP D L WW H KWPYP+ S+
Sbjct: 257 SLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQ 296
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 34/219 (15%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+++C +I P + + +++ + S + S+ G + +D LDQF
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQF 160
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD----- 192
M Y +L ++++L + + EA++ +E ++LT ++P S + + +
Sbjct: 161 MEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMDRN 215
Query: 193 -DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+++VD + +F D P +R ELK +L + Y +
Sbjct: 216 GSSDEEVDVNNSFID---------------PQAEDR--------ELKGQLLRKYSGYLGS 252
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSR 290
+++E ++KR+ GKLP + L WWL H KWPYP+ S+
Sbjct: 253 LKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQ 291
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-VLDDKELDQ 136
V HP Y LL+A++ C ++ P D L ++ A + AK A A GR D ELDQ
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDASAAGRHEPRDPELDQ 147
Query: 137 FMTHYVLLLYSFKEQLQQHV-----RVHAMEAVMAC-WDLEQSLQSLTGVSPGESTGATM 190
FM Y +L ++E+L + + + +EA + C S + ++ G+S G
Sbjct: 148 FMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEGVGS 207
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S+DD D +G + P P + +E ELK++L + Y +
Sbjct: 208 SEDDMDP--------NGRENDP------PEIDPRAEDK-------ELKYQLLKKYSGYLS 246
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 247 SLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 283
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I+ HPLY LL A V C ++ P P++ +LS S V+ + R L
Sbjct: 72 KAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLS-SLAVVTDVPQYSGDRCLPAQQ 126
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L + ++L + ++++ + G+
Sbjct: 127 PAADPELDQFMETYCYMLTRYGQELAR--------------PIQEAEEFFRGI------- 165
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
E+Q+DS D S D D + G +P +S V + L Y
Sbjct: 166 -------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSG 216
Query: 248 KIVDIREEILRKRR--AGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ + EI K++ G LP D L WW H +WPYP+
Sbjct: 217 YLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 258
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + D E
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGADPE 143
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGATM 190
LD+FM Y +L +K L + EA +E L++L TGV + G S +
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDGVI 199
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S D+E L G D V + + +R +LK L + + +I
Sbjct: 200 SSDEE-------------LSGGDHE-----VAEDGRQRCEDR---DLKDRLLRKFGSRIS 238
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 275
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
K++I HPLY +LL ++ C ++ P+ ++ I ++ R V + A + D E
Sbjct: 70 KSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC-FGADPE 127
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSDD 193
LD+FM Y +L +K L + EA +E LQ+L G ++ +SDD
Sbjct: 128 LDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT---GPASATALSDD 180
Query: 194 DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIR 253
V SD + + +S++ +R +LK +L + + I ++
Sbjct: 181 G--AVSSDEELREDD----------DIAADDSQQRSNDR---DLKDQLLRKFGSHISSLK 225
Query: 254 EEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
E +K++ GKLP + L WW H KWPYPT
Sbjct: 226 LEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 40/223 (17%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 192 DDD-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
D E++VD + F D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA--NGR 127
++ KA+I+ HP Y +LL A+V+C ++ P P++ A+L + A +A G
Sbjct: 120 SLLVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 175
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP---GE 184
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP G
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSLGY 231
Query: 185 STGATMSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
A +++ E++VD + F D P +R ELK +L
Sbjct: 232 GEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQL 268
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 269 LRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 314
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L ++E+L + + AME + ++ S
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSAR 198
Query: 188 ATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
++D + V S + D G + P P + +E ELK +L + Y
Sbjct: 199 LLLADGKSECVGSSEDDMDPSGRENEP------PEIDPRAEDK-------ELKFQLLKKY 245
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 246 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L ++E+L + + AME + ++ S
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSAR 198
Query: 188 ATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
++D + V S + D G + P P + +E ELK +L + Y
Sbjct: 199 LLLADGKSECVGSSEDDMDPSGRENEP------PEIDPRAEDK-------ELKFQLLKKY 245
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E +K++ GKLP + L WW H KWPYP+
Sbjct: 246 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 55/224 (24%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA------QLSRSRDVLAKYSAVANGR 127
KAEI+ HP Y LL+A++ C ++ P D L K+ A QL + +
Sbjct: 82 KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDD 141
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAME---AVMACWDLEQSLQSLTGVSPGE 184
+ D +LDQF +HA E A + + L ++
Sbjct: 142 DVPDHQLDQF--------------------MHADEVQGGAGAADPGSRGVLQLDSIADSN 181
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
G S++++D + D S +LKH+L
Sbjct: 182 CEGTGSSEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMK 216
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPT 287
Y + D+R+ ++ + GKLP + L WW L + KWPYP+
Sbjct: 217 YGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPS 260
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS------LTGVSPGEST 186
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESKA 189
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G SDDDE + S + + D G + P +++L K L + Y
Sbjct: 190 GLDSSDDDEHEDGSGMEMMEAAEDE----DLGIIDPRSDDKAL--------KRHLLRKYS 237
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+ +R+E+ +KR+ GKLP + L WW H +WP P+
Sbjct: 238 GYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPS 278
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTVSRTNSCIAISLFNSICTLNSY 309
V I+++++ GKLPG+ TS+LK W H PYPT +A S F S +N++
Sbjct: 551 VPFTGSIVKRKKRGKLPGEATSILKKWLFEHNMHPYPT-EEEKVALANSTFLSFNQINNW 609
Query: 310 LV 311
Sbjct: 610 FT 611
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
+LK+ L Y + + E+ RK++ GKLP D L WW H +WPYP+
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 55
>sp|P41778|PBX1_MOUSE Pre-B-cell leukemia transcription factor 1 OS=Mus musculus GN=Pbx1
PE=1 SV=2
Length = 430
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 219 PLVPTESER--SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSLLKA 275
P+ P E ER S++ R ++ +LKQ E ++ +R L RR + T +L
Sbjct: 191 PISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNE 250
Query: 276 WWLSHAKWPYPT 287
++ SH PYP+
Sbjct: 251 YFYSHLSNPYPS 262
>sp|P40424|PBX1_HUMAN Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens GN=PBX1
PE=1 SV=1
Length = 430
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 219 PLVPTESER--SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSLLKA 275
P+ P E ER S++ R ++ +LKQ E ++ +R L RR + T +L
Sbjct: 191 PISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNE 250
Query: 276 WWLSHAKWPYPT 287
++ SH PYP+
Sbjct: 251 YFYSHLSNPYPS 262
>sp|P40425|PBX2_HUMAN Pre-B-cell leukemia transcription factor 2 OS=Homo sapiens GN=PBX2
PE=1 SV=2
Length = 430
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 219 PLVPTESER--SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSLLKA 275
P+ P E ER S++ R ++ +LKQ E ++ +R L RR + T +L
Sbjct: 202 PVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNE 261
Query: 276 WWLSHAKWPYPT 287
++ SH PYP+
Sbjct: 262 YFYSHLSNPYPS 273
>sp|O35984|PBX2_MOUSE Pre-B-cell leukemia transcription factor 2 OS=Mus musculus GN=Pbx2
PE=1 SV=1
Length = 430
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 219 PLVPTESER--SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSLLKA 275
P+ P E ER S++ R ++ +LKQ E ++ +R L RR + T +L
Sbjct: 202 PVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNE 261
Query: 276 WWLSHAKWPYPT 287
++ SH PYP+
Sbjct: 262 YFYSHLSNPYPS 273
>sp|Q8QGC4|PBX1_XENLA Pre-B-cell leukemia transcription factor 1 OS=Xenopus laevis
GN=pbx1 PE=1 SV=1
Length = 347
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 219 PLVPTESER--SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSLLKA 275
P+ P E ER S++ R ++ +LKQ E ++ +R L RR + T +L
Sbjct: 191 PISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNE 250
Query: 276 WWLSHAKWPYPT 287
++ SH PYP+
Sbjct: 251 YFYSHLSNPYPS 262
>sp|B4F6V6|PBX1_XENTR Pre-B-cell leukemia transcription factor 1 OS=Xenopus tropicalis
GN=pbx1 PE=2 SV=1
Length = 347
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 219 PLVPTESER--SLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSLLKA 275
P+ P E ER S++ R ++ +LKQ E ++ +R L RR + T +L
Sbjct: 191 PISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNE 250
Query: 276 WWLSHAKWPYPT 287
++ SH PYP+
Sbjct: 251 YFYSHLSNPYPS 262
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 4 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 55
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 52
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPT 287
ELK L + Y + +R E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,195,754
Number of Sequences: 539616
Number of extensions: 6313772
Number of successful extensions: 58978
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 43679
Number of HSP's gapped (non-prelim): 12593
length of query: 335
length of database: 191,569,459
effective HSP length: 118
effective length of query: 217
effective length of database: 127,894,771
effective search space: 27753165307
effective search space used: 27753165307
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)