Query 019841
Match_columns 335
No_of_seqs 189 out of 1040
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 07:53:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019841.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019841hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ce7a1 a.269.1.1 (A:411-603) 100.0 2.4E-31 1.7E-35 235.2 16.3 146 169-326 2-191 (193)
2 d2di4a1 a.269.1.1 (A:406-607) 100.0 1.4E-30 1E-34 231.4 16.8 148 169-329 2-193 (202)
3 d1hfca_ d.92.1.11 (A:) Fibrobl 79.7 0.29 2.1E-05 38.2 1.4 17 170-186 102-118 (157)
4 d1rm8a_ d.92.1.11 (A:) Matrix 79.1 0.29 2.1E-05 38.3 1.2 18 170-187 113-130 (169)
5 d1mmqa_ d.92.1.11 (A:) Matrily 75.9 0.47 3.4E-05 37.7 1.7 17 171-187 111-127 (166)
6 d1xuca1 d.92.1.11 (A:104-272) 74.0 0.57 4.1E-05 37.0 1.7 17 171-187 110-126 (169)
7 d1i76a_ d.92.1.11 (A:) Neutrop 73.2 0.63 4.6E-05 36.7 1.7 17 171-187 109-125 (163)
8 d2ovxa1 d.92.1.11 (A:110-443) 72.3 0.54 4E-05 36.7 1.1 16 171-186 108-123 (159)
9 d1hv5a_ d.92.1.11 (A:) Stromel 71.6 0.64 4.6E-05 37.0 1.4 15 172-186 111-125 (162)
10 d1qiba_ d.92.1.11 (A:) Gelatin 70.9 0.83 6E-05 35.4 1.9 17 171-187 106-122 (161)
11 d1hy7a_ d.92.1.11 (A:) Stromel 69.8 0.81 5.9E-05 35.8 1.7 16 171-186 110-125 (168)
12 d1y93a1 d.92.1.11 (A:106-263) 64.6 0.98 7.2E-05 34.9 1.1 17 171-187 104-120 (158)
13 d1c7ka_ d.92.1.1 (A:) Zinc pro 59.3 1.8 0.00013 34.6 1.7 29 156-186 61-89 (132)
14 d1bqqm_ d.92.1.11 (M:) Membran 58.7 1.2 8.9E-05 34.2 0.7 17 171-187 117-133 (174)
15 d1sata2 d.92.1.6 (A:4-246) Met 55.3 2.6 0.00019 35.8 2.4 15 172-186 165-179 (243)
16 d1kapp2 d.92.1.6 (P:1-246) Met 54.2 2.7 0.0002 35.7 2.2 15 172-186 168-182 (246)
17 d1k7ia2 d.92.1.6 (A:18-258) Me 52.3 3.2 0.00023 35.2 2.4 15 172-186 163-177 (241)
18 d1g9ka2 d.92.1.6 (A:3-244) Met 49.0 3.7 0.00027 34.6 2.2 16 171-186 158-173 (242)
19 d1q08a_ a.6.1.3 (A:) Transcrip 42.0 49 0.0036 23.6 7.6 22 265-286 1-24 (94)
20 d1r8da_ a.6.1.3 (A:) Multidrug 35.3 72 0.0052 22.8 7.8 22 265-286 44-67 (109)
21 d1r8ea1 a.6.1.3 (A:3-120) Tran 25.6 54 0.0039 23.8 5.4 21 265-285 46-68 (118)
22 d1k9xa_ d.92.1.5 (A:) Thermost 23.1 13 0.00094 35.1 1.4 16 177-194 264-279 (497)
No 1
>d2ce7a1 a.269.1.1 (A:411-603) Cell division protein FtsH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.97 E-value=2.4e-31 Score=235.19 Aligned_cols=146 Identities=20% Similarity=0.250 Sum_probs=112.0
Q ss_pred CCHhHHHHHHHHHHhHHHHHHHhC--CCCceeEecchhHHhhhCccccccceeeecchhhhhhccccCCHHHHHHHHHHH
Q 019841 169 FSQKYHNRVIQHEAGHFLIAYLVG--ILPKGYTLTSLEALKKEGSLNVQAGTAFVDFEFLEEVNSGKVSATTLNRFSCIA 246 (335)
Q Consensus 169 ~s~~~r~RIA~HEAGHaLVAylLg--~PV~~~TI~p~eal~~~G~~~~~gG~~f~~~~~~~~l~~g~~s~~~L~r~~~Vl 246 (335)
+||++|+||||||||||+|||+++ .|+.++||+|+ | +..+|++...+.. +.+..|++++.+.++|+
T Consensus 2 ls~~er~~vA~HEAGHAlva~~l~~~~~i~~vsI~~r------~--~~~~g~~~~~~~~----~~~~~t~~~l~~~i~v~ 69 (193)
T d2ce7a1 2 ISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPR------G--YKALGYTLHLPEE----DKYLVSRNELLDKLTAL 69 (193)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSTTCCCCCEEECC-----------------------------CCSCBHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEecC------c--cCCCceeecCCcc----ccccCcHHHHHHHHHHH
Confidence 689999999999999999999995 68999999997 3 2345655433321 34667999999999999
Q ss_pred hhHHHHHHHHhCCc-cchhhHHHHHHHHHHh----cCCCHH-------------------------------HHHHHHH-
Q 019841 247 LAGVATEYLLYGYA-EGGLADINKLDALLKG----LGFTQK-------------------------------KADSQVR- 289 (335)
Q Consensus 247 LAGrAAE~LvyG~a-~Gg~~Dl~~at~i~~~----lG~s~~-------------------------------~~d~evR- 289 (335)
|||||||+++||+. +|+++|++++|++++. +||+.+ .+|++++
T Consensus 70 LaGraAE~~~~g~~s~Ga~~Dl~~At~lA~~~v~~~Gm~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~id~ev~~ 149 (193)
T d2ce7a1 70 LGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKK 149 (193)
T ss_dssp THHHHHHHHHHSSCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC-------------CCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccCcHHHHHHHHHHHHHhhCcCCCcCceeeccCCccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999996 5999999999999864 566421 2455544
Q ss_pred ---HHHHHHHHHHHHcHHHHHHHHHHHHcccch--HHHHHHH
Q 019841 290 ---WSLLNTVLLLRRHKGARAKLAEAMTMGKSL--GSCIDII 326 (335)
Q Consensus 290 ---~A~~~A~~LLr~hr~aleaLaeaLle~esl--~~Ci~~I 326 (335)
.||.+|+++|++|++.+++|+++|+++++| ++..++|
T Consensus 150 ll~~a~~~a~~iL~~~~~~l~~la~~Lle~e~L~g~ei~~il 191 (193)
T d2ce7a1 150 IVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRIL 191 (193)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHH
Confidence 699999999999999999999999999999 4444554
No 2
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.97 E-value=1.4e-30 Score=231.38 Aligned_cols=148 Identities=16% Similarity=0.236 Sum_probs=116.2
Q ss_pred CCHhHHHHHHHHHHhHHHHHHHhC--CCCceeEecchhHHhhhCccccccceeeecchhhhhhccccCCHHHHHHHHHHH
Q 019841 169 FSQKYHNRVIQHEAGHFLIAYLVG--ILPKGYTLTSLEALKKEGSLNVQAGTAFVDFEFLEEVNSGKVSATTLNRFSCIA 246 (335)
Q Consensus 169 ~s~~~r~RIA~HEAGHaLVAylLg--~PV~~~TI~p~eal~~~G~~~~~gG~~f~~~~~~~~l~~g~~s~~~L~r~~~Vl 246 (335)
+||++|+||||||||||+|||+++ +||.++||+|+ | +..+|+.+.... +....|++++.+.++|+
T Consensus 2 ls~~ek~~vA~HEAGHAvva~~l~~~~~v~~vtI~pr------g--~~~g~~~~~~~~-----~~~~~t~~~l~~~i~v~ 68 (202)
T d2di4a1 2 ISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPR------G--MALGVTQQLPIE-----DKHIYDKKDLYNKILVL 68 (202)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC-----------------------------CCCCBHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEecC------C--ccccccccCccc-----ccchhhHHHHHHHHHHH
Confidence 589999999999999999999997 68999999997 4 234444443221 34677999999999999
Q ss_pred hhHHHHHHHHhCC---ccchhhHHHHHHHHHHh----cCCCH-----------------------------HHHHHHHH-
Q 019841 247 LAGVATEYLLYGY---AEGGLADINKLDALLKG----LGFTQ-----------------------------KKADSQVR- 289 (335)
Q Consensus 247 LAGrAAE~LvyG~---a~Gg~~Dl~~at~i~~~----lG~s~-----------------------------~~~d~evR- 289 (335)
|||||||+++||+ .+|+.+|+++++++++. +||+. ..+|.+++
T Consensus 69 LgGraAE~i~~g~~~~~~g~~~dl~~At~~A~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~id~ev~~ 148 (202)
T d2di4a1 69 LGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMTTAVDTSPDLLREIDEEVKR 148 (202)
T ss_dssp HHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC----------CCCSCCHHHHHHHHHHHHH
T ss_pred HhhhhcceeeecCcccccCccchHHHHHHHHHHHHHhhCcccccchhhhcccccchhhhhhccccchhhHHHHHHHHHHH
Confidence 9999999999997 36999999999999764 56542 13555544
Q ss_pred ---HHHHHHHHHHHHcHHHHHHHHHHHHcccch--HHHHHHHHhh
Q 019841 290 ---WSLLNTVLLLRRHKGARAKLAEAMTMGKSL--GSCIDIIEDN 329 (335)
Q Consensus 290 ---~A~~~A~~LLr~hr~aleaLaeaLle~esl--~~Ci~~Ie~~ 329 (335)
+|+.+|++||++|++.+++||++|+++++| ++..++|++.
T Consensus 149 ll~~a~~~a~~iL~~~~~~l~~la~~Lle~etL~~~ei~~il~~~ 193 (202)
T d2di4a1 149 IITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLY 193 (202)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCHHHHHHHHHHC
Confidence 799999999999999999999999999999 7777888874
No 3
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.65 E-value=0.29 Score=38.17 Aligned_cols=17 Identities=41% Similarity=0.522 Sum_probs=13.6
Q ss_pred CHhHHHHHHHHHHhHHH
Q 019841 170 SQKYHNRVIQHEAGHFL 186 (335)
Q Consensus 170 s~~~r~RIA~HEAGHaL 186 (335)
...+...|+.||-||+|
T Consensus 102 ~~~~~~~v~~HEiGHaL 118 (157)
T d1hfca_ 102 REYNLHRVAAHELGHSL 118 (157)
T ss_dssp SSCBHHHHHHHHHHHHH
T ss_pred ccchhhhhHhhhhhhhc
Confidence 34566789999999986
No 4
>d1rm8a_ d.92.1.11 (A:) Matrix metalloproteinase-16 (MMP-16) {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.14 E-value=0.29 Score=38.27 Aligned_cols=18 Identities=33% Similarity=0.180 Sum_probs=14.6
Q ss_pred CHhHHHHHHHHHHhHHHH
Q 019841 170 SQKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 170 s~~~r~RIA~HEAGHaLV 187 (335)
+..+...|+.||-||+|-
T Consensus 113 ~~~~~~~v~~HEiGHaLG 130 (169)
T d1rm8a_ 113 DGNDLFLVAVHELGHALG 130 (169)
T ss_dssp SSEEHHHHHHHHHHHHHT
T ss_pred Ccchhhhhhhhhhhhhhc
Confidence 345677899999999975
No 5
>d1mmqa_ d.92.1.11 (A:) Matrilysin (MMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.90 E-value=0.47 Score=37.69 Aligned_cols=17 Identities=29% Similarity=0.151 Sum_probs=13.8
Q ss_pred HhHHHHHHHHHHhHHHH
Q 019841 171 QKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaLV 187 (335)
..+...|+.||-||+|-
T Consensus 111 ~~~~~~v~~HEiGHaLG 127 (166)
T d1mmqa_ 111 GINFLYAATHELGHSLG 127 (166)
T ss_dssp SEEHHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhccccC
Confidence 45567899999999975
No 6
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.97 E-value=0.57 Score=36.98 Aligned_cols=17 Identities=35% Similarity=0.145 Sum_probs=14.0
Q ss_pred HhHHHHHHHHHHhHHHH
Q 019841 171 QKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaLV 187 (335)
..+...|+.||-||+|-
T Consensus 110 ~~~~~~v~~HEiGHaLG 126 (169)
T d1xuca1 110 GYNLFLVAAHEFGHSLG 126 (169)
T ss_dssp SEEHHHHHHHHHHHHHT
T ss_pred CceeeeehhhhhccccC
Confidence 45567899999999975
No 7
>d1i76a_ d.92.1.11 (A:) Neutrophil collagenase (MMP-8) {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.17 E-value=0.63 Score=36.73 Aligned_cols=17 Identities=35% Similarity=0.178 Sum_probs=13.9
Q ss_pred HhHHHHHHHHHHhHHHH
Q 019841 171 QKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaLV 187 (335)
..+...|+.||-||+|-
T Consensus 109 ~~~~~~v~~HEiGHaLG 125 (163)
T d1i76a_ 109 NYNLFLVAAHEFGHSLG 125 (163)
T ss_dssp SCBHHHHHHHHHHHHHT
T ss_pred cchheeehhhhhhhhhc
Confidence 44567899999999985
No 8
>d2ovxa1 d.92.1.11 (A:110-443) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.34 E-value=0.54 Score=36.72 Aligned_cols=16 Identities=31% Similarity=0.208 Sum_probs=13.0
Q ss_pred HhHHHHHHHHHHhHHH
Q 019841 171 QKYHNRVIQHEAGHFL 186 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaL 186 (335)
..+.+.|+.||-||+|
T Consensus 108 ~~~~~~v~~HElGHaL 123 (159)
T d2ovxa1 108 GYSLFLVAAHQFGHAL 123 (159)
T ss_dssp SEEHHHHHHHHHHHHT
T ss_pred ccceeeeehhhhcccc
Confidence 3556779999999986
No 9
>d1hv5a_ d.92.1.11 (A:) Stromelysin-3 (MMP-11) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.64 E-value=0.64 Score=37.03 Aligned_cols=15 Identities=40% Similarity=0.452 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHhHHH
Q 019841 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+-..|+.||-||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (162)
T d1hv5a_ 111 TDLLQVAAHEFGHVL 125 (162)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhhc
Confidence 345679999999986
No 10
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.87 E-value=0.83 Score=35.41 Aligned_cols=17 Identities=29% Similarity=0.122 Sum_probs=13.5
Q ss_pred HhHHHHHHHHHHhHHHH
Q 019841 171 QKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaLV 187 (335)
..+...++.||-||+|-
T Consensus 106 ~~~~~~~~~HEiGHaLG 122 (161)
T d1qiba_ 106 GYSLFLVAAHEFGHAMG 122 (161)
T ss_dssp SEEHHHHHHHHHHHHHT
T ss_pred cchhheeeeeccccccc
Confidence 34566799999999974
No 11
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]}
Probab=69.81 E-value=0.81 Score=35.82 Aligned_cols=16 Identities=38% Similarity=0.324 Sum_probs=13.4
Q ss_pred HhHHHHHHHHHHhHHH
Q 019841 171 QKYHNRVIQHEAGHFL 186 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaL 186 (335)
..+..-|+.||-||+|
T Consensus 110 ~~~~~~v~~HEiGHAL 125 (168)
T d1hy7a_ 110 GTNLFLVAAHEIGHSL 125 (168)
T ss_dssp SEEHHHHHHHHHHHHH
T ss_pred cccceeeeHhhhcccc
Confidence 4556789999999998
No 12
>d1y93a1 d.92.1.11 (A:106-263) Macrophage elastase (MMP-12) {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.63 E-value=0.98 Score=34.92 Aligned_cols=17 Identities=29% Similarity=0.126 Sum_probs=13.9
Q ss_pred HhHHHHHHHHHHhHHHH
Q 019841 171 QKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaLV 187 (335)
..+..-++.||-||+|-
T Consensus 104 ~~~~~~~~~HEiGHaLG 120 (158)
T d1y93a1 104 GTNLFLTAVHEIGHSLG 120 (158)
T ss_dssp SEEHHHHHHHHHHHHTT
T ss_pred CccHHHHhhhhhhhhcC
Confidence 45667899999999874
No 13
>d1c7ka_ d.92.1.1 (A:) Zinc protease {Streptomyces caespitosus [TaxId: 53502]}
Probab=59.32 E-value=1.8 Score=34.61 Aligned_cols=29 Identities=41% Similarity=0.573 Sum_probs=17.6
Q ss_pred CCCccccccccCCCCHhHHHHHHHHHHhHHH
Q 019841 156 GVGSLVLDTIGHTFSQKYHNRVIQHEAGHFL 186 (335)
Q Consensus 156 ~~~~llld~l~r~~s~~~r~RIA~HEAGHaL 186 (335)
+.+.+.+|.-+. -.-++-||+-||-||.|
T Consensus 61 G~g~i~lg~q~~--qgy~~~RIaaHE~GH~L 89 (132)
T d1c7ka_ 61 GRGYIFLDYQQN--QQYDSTRVTAHETGHVL 89 (132)
T ss_dssp SCEEEEEEHHHH--HHSCHHHHHHHHHHHHH
T ss_pred CcEEEEechHHh--cCCCchheeeehhcccc
Confidence 334455553331 13346699999999964
No 14
>d1bqqm_ d.92.1.11 (M:) Membrane-type matrix metalloproteinase (CDMT1-MMP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.71 E-value=1.2 Score=34.21 Aligned_cols=17 Identities=35% Similarity=0.175 Sum_probs=13.3
Q ss_pred HhHHHHHHHHHHhHHHH
Q 019841 171 QKYHNRVIQHEAGHFLI 187 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaLV 187 (335)
..+...++.||-||+|-
T Consensus 117 ~~~~~~v~~HEiGHaLG 133 (174)
T d1bqqm_ 117 GNDIFLVAVHELGHALG 133 (174)
T ss_dssp SCBHHHHHHHHHHHTTT
T ss_pred chhhhhhhhcccccccC
Confidence 34556899999999864
No 15
>d1sata2 d.92.1.6 (A:4-246) Metalloprotease {Serratia marcescens [TaxId: 615]}
Probab=55.28 E-value=2.6 Score=35.76 Aligned_cols=15 Identities=40% Similarity=0.729 Sum_probs=12.4
Q ss_pred hHHHHHHHHHHhHHH
Q 019841 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+...++.||-||+|
T Consensus 165 ~~~~~t~lHEIGHaL 179 (243)
T d1sata2 165 DYGRQTFTHEIGHAL 179 (243)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHh
Confidence 456679999999986
No 16
>d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]}
Probab=54.15 E-value=2.7 Score=35.70 Aligned_cols=15 Identities=40% Similarity=0.778 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHhHHH
Q 019841 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+-..++.||-||+|
T Consensus 168 ~~~~~t~lHEIGHaL 182 (246)
T d1kapp2 168 NYGRQTLTHEIGHTL 182 (246)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhh
Confidence 456679999999986
No 17
>d1k7ia2 d.92.1.6 (A:18-258) Metalloprotease {Erwinia chrysanthemi [TaxId: 556]}
Probab=52.31 E-value=3.2 Score=35.20 Aligned_cols=15 Identities=40% Similarity=0.744 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHhHHH
Q 019841 172 KYHNRVIQHEAGHFL 186 (335)
Q Consensus 172 ~~r~RIA~HEAGHaL 186 (335)
.+-..++.||-||+|
T Consensus 163 ~~~~~t~~HEIGHaL 177 (241)
T d1k7ia2 163 EYGRQTFTHEIGHAL 177 (241)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHh
Confidence 344579999999986
No 18
>d1g9ka2 d.92.1.6 (A:3-244) Metalloprotease {Pseudomonas sp., tac ii 18 [TaxId: 306]}
Probab=49.01 E-value=3.7 Score=34.55 Aligned_cols=16 Identities=38% Similarity=0.708 Sum_probs=13.3
Q ss_pred HhHHHHHHHHHHhHHH
Q 019841 171 QKYHNRVIQHEAGHFL 186 (335)
Q Consensus 171 ~~~r~RIA~HEAGHaL 186 (335)
..+-.-++.||-||+|
T Consensus 158 ~~~~~~t~~HEIGHaL 173 (242)
T d1g9ka2 158 GNYGRQTLTHEIGHTL 173 (242)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHhhhhh
Confidence 4566679999999997
No 19
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=42.02 E-value=49 Score=23.62 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=16.4
Q ss_pred hHHHHHHHH--HHhcCCCHHHHHH
Q 019841 265 ADINKLDAL--LKGLGFTQKKADS 286 (335)
Q Consensus 265 ~Dl~~at~i--~~~lG~s~~~~d~ 286 (335)
+|++++.=| ++.+|||-++|..
T Consensus 1 sDl~RL~fI~~ar~lGFsL~EI~~ 24 (94)
T d1q08a_ 1 SDLQRLKFIRHARQLGFSLESIRE 24 (94)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHH
Confidence 588888766 5679999876553
No 20
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=35.25 E-value=72 Score=22.77 Aligned_cols=22 Identities=27% Similarity=0.631 Sum_probs=12.9
Q ss_pred hHHHHHHHH--HHhcCCCHHHHHH
Q 019841 265 ADINKLDAL--LKGLGFTQKKADS 286 (335)
Q Consensus 265 ~Dl~~at~i--~~~lG~s~~~~d~ 286 (335)
+|+.++..| ++.+|||-+++..
T Consensus 44 ~~~~~l~~I~~lr~~G~sl~eI~~ 67 (109)
T d1r8da_ 44 ADLERLQQILFFKEIGFRLDEIKE 67 (109)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 455555544 4567777766554
No 21
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=25.61 E-value=54 Score=23.83 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=12.8
Q ss_pred hHHHHHHHH--HHhcCCCHHHHH
Q 019841 265 ADINKLDAL--LKGLGFTQKKAD 285 (335)
Q Consensus 265 ~Dl~~at~i--~~~lG~s~~~~d 285 (335)
.|+.++..| ++.+|||-+++.
T Consensus 46 ~~l~~l~~I~~lr~~g~sl~eIk 68 (118)
T d1r8ea1 46 SQLIHLDLIKSLKYIGTPLEEMK 68 (118)
T ss_dssp GGGGHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHH
Confidence 456665554 456788776554
No 22
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=23.05 E-value=13 Score=35.12 Aligned_cols=16 Identities=38% Similarity=0.385 Sum_probs=12.2
Q ss_pred HHHHHHhHHHHHHHhCCC
Q 019841 177 VIQHEAGHFLIAYLVGIL 194 (335)
Q Consensus 177 IA~HEAGHaLVAylLg~P 194 (335)
-++||+||++ |-.|+|
T Consensus 264 s~iHE~GHal--YEq~l~ 279 (497)
T d1k9xa_ 264 STVHEFGHAL--YELQQD 279 (497)
T ss_dssp HHHHHHHHHH--HHHTSC
T ss_pred HHHHHhhhhH--HHhCCC
Confidence 4699999998 456655
Done!