Query         019842
Match_columns 335
No_of_seqs    391 out of 2901
Neff          9.4 
Searched_HMMs 46136
Date          Fri Mar 29 04:58:33 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019842hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG1187 Serine/threonine prote 100.0 6.2E-46 1.4E-50  341.1  20.1  195  137-332    61-257 (361)
  2 KOG0595 Serine/threonine-prote 100.0 3.3E-41 7.1E-46  298.6  16.3  174  151-331    10-192 (429)
  3 KOG0192 Tyrosine kinase specif 100.0 9.6E-39 2.1E-43  291.9  17.5  174  154-331    44-224 (362)
  4 KOG0575 Polo-like serine/threo 100.0 3.7E-38 8.1E-43  291.7  17.6  174  151-330    18-195 (592)
  5 KOG0615 Serine/threonine prote 100.0 2.7E-38 5.9E-43  280.0  15.1  178  149-333   170-358 (475)
  6 KOG0598 Ribosomal protein S6 k 100.0 3.2E-38 6.9E-43  277.0  14.4  177  150-332    24-204 (357)
  7 KOG1026 Nerve growth factor re 100.0 6.6E-38 1.4E-42  300.1  15.2  183  147-332   482-684 (774)
  8 KOG0581 Mitogen-activated prot 100.0 9.5E-38 2.1E-42  274.1  14.8  170  154-331    82-255 (364)
  9 KOG3653 Transforming growth fa 100.0 1.3E-36 2.9E-41  273.4  17.8  167  154-328   213-393 (534)
 10 KOG0197 Tyrosine kinases [Sign 100.0 1.1E-36 2.3E-41  278.9  12.1  173  155-332   210-383 (468)
 11 KOG0591 NIMA (never in mitosis 100.0 6.6E-38 1.4E-42  265.3   1.9  182  151-332    19-207 (375)
 12 KOG0600 Cdc2-related protein k 100.0 7.3E-36 1.6E-40  270.6  14.2  173  150-328   116-294 (560)
 13 KOG0616 cAMP-dependent protein 100.0 1.2E-35 2.6E-40  253.2  14.5  174  150-332    43-220 (355)
 14 KOG0196 Tyrosine kinase, EPH ( 100.0 4.6E-36 9.9E-41  283.4  13.1  177  151-332   629-813 (996)
 15 KOG0593 Predicted protein kina 100.0 2.5E-36 5.3E-41  258.1   9.6  174  152-331     3-180 (396)
 16 KOG1094 Discoidin domain recep 100.0 1.9E-35   4E-40  271.5  15.9  182  147-332   534-718 (807)
 17 KOG2052 Activin A type IB rece 100.0   2E-35 4.2E-40  264.1  13.7  186  132-328   195-395 (513)
 18 KOG0194 Protein tyrosine kinas 100.0 2.7E-35 5.9E-40  273.3  13.6  183  144-331   150-340 (474)
 19 KOG0659 Cdk activating kinase  100.0 9.9E-35 2.1E-39  244.2  13.3  173  151-329     2-177 (318)
 20 KOG0198 MEKK and related serin 100.0 6.3E-34 1.4E-38  253.1  17.4  175  152-331    18-199 (313)
 21 KOG0597 Serine-threonine prote 100.0 4.9E-35 1.1E-39  268.0  10.3  174  151-331     2-178 (808)
 22 KOG0583 Serine/threonine prote 100.0 7.6E-34 1.6E-38  261.7  17.7  177  149-331    15-200 (370)
 23 KOG0611 Predicted serine/threo 100.0 6.9E-35 1.5E-39  257.9  10.0  175  150-331    52-230 (668)
 24 KOG0578 p21-activated serine/t 100.0 2.3E-34   5E-39  264.5  11.9  175  151-332   273-448 (550)
 25 KOG0592 3-phosphoinositide-dep 100.0 3.7E-34 8.1E-39  261.5  13.1  178  149-332    71-266 (604)
 26 KOG0580 Serine/threonine prote 100.0 1.2E-34 2.6E-39  240.3   7.7  179  149-333    20-202 (281)
 27 KOG0193 Serine/threonine prote 100.0 1.7E-33 3.6E-38  260.2  15.9  182  144-333   385-570 (678)
 28 KOG0661 MAPK related serine/th 100.0 1.8E-34   4E-39  259.8   7.1  173  150-329     9-185 (538)
 29 KOG0663 Protein kinase PITSLRE 100.0 1.2E-33 2.5E-38  244.6  11.6  173  151-329    76-253 (419)
 30 KOG0694 Serine/threonine prote 100.0 3.7E-33   8E-38  261.5  15.0  178  149-333   366-548 (694)
 31 KOG0605 NDR and related serine 100.0 5.7E-33 1.2E-37  253.7  15.6  146  149-300   139-288 (550)
 32 KOG0594 Protein kinase PCTAIRE 100.0 5.3E-33 1.2E-37  243.7  14.7  174  152-329    12-196 (323)
 33 KOG1095 Protein tyrosine kinas 100.0 1.1E-33 2.4E-38  280.0  11.4  180  150-332   691-883 (1025)
 34 KOG0585 Ca2+/calmodulin-depend 100.0   7E-33 1.5E-37  249.5  14.4  175  149-329    95-291 (576)
 35 cd05571 STKc_PKB Catalytic dom 100.0 3.3E-32 7.2E-37  248.9  18.0  169  157-331     1-173 (323)
 36 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-32 7.8E-37  252.6  17.4  175  151-331     1-214 (363)
 37 KOG0582 Ste20-like serine/thre 100.0 3.3E-32 7.2E-37  243.6  15.9  177  150-330    25-207 (516)
 38 cd05595 STKc_PKB_beta Catalyti 100.0 5.5E-32 1.2E-36  247.5  17.6  169  157-331     1-173 (323)
 39 cd05593 STKc_PKB_gamma Catalyt 100.0 8.4E-32 1.8E-36  246.7  18.5  170  157-332     1-174 (328)
 40 cd05102 PTKc_VEGFR3 Catalytic  100.0 3.8E-32 8.3E-37  249.9  15.7  181  149-332     5-255 (338)
 41 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-31 3.2E-36  244.8  19.3  169  157-331     1-174 (325)
 42 cd05599 STKc_NDR_like Catalyti 100.0 5.6E-32 1.2E-36  251.3  16.7  175  151-331     1-217 (364)
 43 cd05629 STKc_NDR_like_fungal C 100.0 8.6E-32 1.9E-36  251.3  18.1  145  151-301     1-149 (377)
 44 PTZ00263 protein kinase A cata 100.0   6E-32 1.3E-36  247.8  16.7  172  151-331    18-193 (329)
 45 PTZ00426 cAMP-dependent protei 100.0 6.2E-32 1.4E-36  248.7  16.7  173  150-331    29-206 (340)
 46 cd05631 STKc_GRK4 Catalytic do 100.0 1.8E-31 3.9E-36  239.7  19.3  175  153-332     2-180 (285)
 47 cd05600 STKc_Sid2p_Dbf2p Catal 100.0   1E-31 2.2E-36  246.6  17.4  172  151-331     1-176 (333)
 48 cd05612 STKc_PRKX_like Catalyt 100.0 4.9E-32 1.1E-36  244.1  14.8  172  151-331     1-176 (291)
 49 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-31 2.9E-36  243.7  17.4  168  159-332     1-172 (312)
 50 cd05096 PTKc_DDR1 Catalytic do 100.0 1.9E-31 4.1E-36  241.7  18.3  179  151-332     5-219 (304)
 51 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-31 3.5E-36  249.8  18.1  144  152-301     2-149 (381)
 52 KOG0588 Serine/threonine prote 100.0 2.9E-32 6.2E-37  254.1  12.5  173  152-331    13-189 (786)
 53 cd05598 STKc_LATS Catalytic do 100.0 2.2E-31 4.9E-36  248.4  18.3  145  151-301     1-149 (376)
 54 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-31 4.2E-36  249.4  17.7  144  152-301     2-149 (382)
 55 cd05584 STKc_p70S6K Catalytic  100.0 2.9E-31 6.3E-36  242.7  18.1  169  157-331     2-178 (323)
 56 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-31 5.7E-36  247.3  17.3  176  147-329    39-219 (370)
 57 cd05587 STKc_cPKC Catalytic do 100.0 5.2E-31 1.1E-35  241.1  18.5  174  152-331     1-179 (324)
 58 cd05627 STKc_NDR2 Catalytic do 100.0 4.4E-31 9.6E-36  245.0  18.0  175  151-331     1-214 (360)
 59 KOG0658 Glycogen synthase kina 100.0 2.3E-32   5E-37  239.8   8.5  169  152-329    25-201 (364)
 60 cd05588 STKc_aPKC Catalytic do 100.0 4.7E-31   1E-35  241.9  17.6  169  157-331     1-174 (329)
 61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.7E-31 1.2E-35  236.8  17.8  172  151-328     5-178 (288)
 62 cd05618 STKc_aPKC_iota Catalyt 100.0 5.9E-31 1.3E-35  241.2  18.1  169  157-331     1-174 (329)
 63 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.1E-31 6.8E-36  244.9  16.2  175  151-331     1-208 (350)
 64 KOG4721 Serine/threonine prote 100.0   2E-32 4.3E-37  251.1   7.7  167  151-332   124-290 (904)
 65 cd05616 STKc_cPKC_beta Catalyt 100.0 7.9E-31 1.7E-35  239.8  18.3  175  152-332     1-180 (323)
 66 cd05604 STKc_SGK3 Catalytic do 100.0 6.6E-31 1.4E-35  240.5  17.7  169  157-331     1-174 (325)
 67 cd05582 STKc_RSK_N N-terminal  100.0 6.1E-31 1.3E-35  239.9  17.3  169  157-331     2-176 (318)
 68 cd05624 STKc_MRCK_beta Catalyt 100.0 9.4E-31   2E-35  240.1  18.6  172  151-327     1-177 (331)
 69 cd07869 STKc_PFTAIRE1 Catalyti 100.0 9.2E-31   2E-35  237.1  18.2  173  150-328     4-178 (303)
 70 cd05575 STKc_SGK Catalytic dom 100.0 9.5E-31 2.1E-35  239.2  18.0  169  157-331     1-174 (323)
 71 cd05591 STKc_nPKC_epsilon Cata 100.0 7.5E-31 1.6E-35  239.7  17.2  170  157-332     1-175 (321)
 72 cd05589 STKc_PKN Catalytic dom 100.0 7.5E-31 1.6E-35  240.0  17.2  172  153-331     1-179 (324)
 73 cd05590 STKc_nPKC_eta Catalyti 100.0 7.4E-31 1.6E-35  239.7  17.1  170  157-332     1-175 (320)
 74 cd05615 STKc_cPKC_alpha Cataly 100.0 8.6E-31 1.9E-35  239.6  17.3  174  152-331     1-179 (323)
 75 PTZ00267 NIMA-related protein  100.0 1.3E-30 2.8E-35  250.4  19.3  177  152-331    68-249 (478)
 76 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-30 2.5E-35  239.5  18.0  172  151-327     1-177 (331)
 77 cd05592 STKc_nPKC_theta_delta  100.0 1.1E-30 2.4E-35  238.2  17.7  169  157-331     1-174 (316)
 78 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-30 2.3E-35  238.6  17.5  169  157-331     1-174 (321)
 79 KOG0589 Serine/threonine prote 100.0 1.2E-31 2.7E-36  244.6  10.6  178  151-332     4-185 (426)
 80 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-30 2.3E-35  240.9  16.8  176  149-332    33-217 (382)
 81 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-30 3.3E-35  238.5  17.6  172  151-327     1-177 (330)
 82 cd05619 STKc_nPKC_theta Cataly 100.0 1.8E-30 3.9E-35  236.7  17.9  169  157-331     1-174 (316)
 83 cd05596 STKc_ROCK Catalytic do 100.0 8.9E-31 1.9E-35  243.8  16.0  174  149-329    41-219 (370)
 84 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.2E-30 4.8E-35  237.2  18.3  169  157-331     1-174 (327)
 85 cd05602 STKc_SGK1 Catalytic do 100.0 1.8E-30 3.9E-35  237.6  17.6  169  157-331     1-174 (325)
 86 cd05614 STKc_MSK2_N N-terminal 100.0   2E-30 4.4E-35  237.9  18.0  172  152-329     1-182 (332)
 87 cd05608 STKc_GRK1 Catalytic do 100.0 2.3E-30   5E-35  231.9  17.8  170  159-331     1-175 (280)
 88 cd05104 PTKc_Kit Catalytic dom 100.0 1.1E-30 2.3E-35  243.7  16.2  180  149-331    33-294 (375)
 89 cd05620 STKc_nPKC_delta Cataly 100.0 1.5E-30 3.3E-35  237.2  16.9  169  157-331     1-174 (316)
 90 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-30   4E-35  241.7  17.3  178  145-329    37-219 (371)
 91 cd05623 STKc_MRCK_alpha Cataly 100.0 3.1E-30 6.8E-35  236.7  18.4  172  151-327     1-177 (332)
 92 cd06649 PKc_MEK2 Catalytic dom 100.0 3.8E-30 8.2E-35  236.1  18.9  175  150-331     4-180 (331)
 93 cd05064 PTKc_EphR_A10 Catalyti 100.0   2E-30 4.3E-35  230.5  16.5  178  150-332     4-187 (266)
 94 cd07848 STKc_CDKL5 Catalytic d 100.0   2E-30 4.4E-35  232.8  16.7  176  151-332     1-180 (287)
 95 cd05605 STKc_GRK4_like Catalyt 100.0 3.8E-30 8.2E-35  231.1  18.4  176  152-332     1-180 (285)
 96 PLN00034 mitogen-activated pro 100.0   2E-30 4.2E-35  240.1  16.6  166  152-327    75-242 (353)
 97 KOG4250 TANK binding protein k 100.0   3E-31 6.4E-36  249.4  11.1  174  154-331    16-202 (732)
 98 KOG0599 Phosphorylase kinase g 100.0 1.7E-31 3.8E-36  225.6   8.5  177  148-331    14-200 (411)
 99 cd06650 PKc_MEK1 Catalytic dom 100.0   3E-30 6.4E-35  237.0  17.5  175  150-331     4-180 (333)
100 KOG0201 Serine/threonine prote 100.0 5.2E-32 1.1E-36  242.0   5.5  175  151-331    13-189 (467)
101 KOG0577 Serine/threonine prote 100.0 6.4E-32 1.4E-36  248.6   6.1  173  152-334    27-203 (948)
102 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-30 2.5E-35  231.0  13.9  180  148-331     3-182 (261)
103 cd05570 STKc_PKC Catalytic dom 100.0 4.1E-30 8.8E-35  234.6  17.1  170  157-332     1-175 (318)
104 cd05106 PTKc_CSF-1R Catalytic  100.0 2.2E-30 4.8E-35  241.4  15.6  181  148-331    35-292 (374)
105 cd06646 STKc_MAP4K5 Catalytic  100.0 8.2E-30 1.8E-34  226.4  18.6  172  150-327     8-180 (267)
106 PLN00113 leucine-rich repeat r 100.0 2.9E-29 6.2E-34  260.6  24.9  169  149-332   688-857 (968)
107 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.3E-30 1.2E-34  240.3  17.1  182  147-331    33-317 (400)
108 KOG1989 ARK protein kinase fam 100.0 1.3E-30 2.9E-35  250.9  13.1  177  147-325    33-227 (738)
109 PRK13184 pknD serine/threonine 100.0 8.4E-30 1.8E-34  253.8  19.2  178  151-331     2-209 (932)
110 PHA03212 serine/threonine kina 100.0 7.2E-30 1.6E-34  239.1  17.3  170  150-332    91-262 (391)
111 KOG0574 STE20-like serine/thre 100.0 2.8E-32 6.1E-37  233.2   0.9  172  152-330    34-206 (502)
112 cd07862 STKc_CDK6 Catalytic do 100.0 1.2E-29 2.6E-34  228.1  18.0  175  151-331     1-187 (290)
113 cd05114 PTKc_Tec_Rlk Catalytic 100.0 9.4E-30   2E-34  224.7  16.8  175  151-331     4-179 (256)
114 cd07859 STKc_TDY_MAPK_plant Ca 100.0   9E-30   2E-34  233.9  17.4  169  152-327     1-180 (338)
115 cd05108 PTKc_EGFR Catalytic do 100.0 8.8E-30 1.9E-34  232.1  16.9  175  151-331     7-189 (316)
116 PHA02988 hypothetical protein; 100.0 1.5E-29 3.2E-34  227.1  17.8  163  156-327    25-194 (283)
117 KOG0586 Serine/threonine prote 100.0 5.9E-30 1.3E-34  237.5  15.5  176  150-332    55-233 (596)
118 KOG0660 Mitogen-activated prot 100.0 1.8E-30 3.8E-35  227.6  11.2  172  150-328    21-202 (359)
119 PF07714 Pkinase_Tyr:  Protein  100.0 5.7E-30 1.2E-34  226.8  14.7  173  155-331     3-183 (259)
120 cd05586 STKc_Sck1_like Catalyt 100.0   1E-29 2.2E-34  233.1  16.7  165  159-329     1-172 (330)
121 cd05062 PTKc_IGF-1R Catalytic  100.0 8.6E-30 1.9E-34  227.6  15.7  181  149-332     4-200 (277)
122 KOG4236 Serine/threonine prote 100.0 5.2E-30 1.1E-34  233.4  14.1  172  156-333   569-746 (888)
123 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-29 3.3E-34  223.9  16.7  177  150-331     5-182 (261)
124 PTZ00283 serine/threonine prot 100.0 1.2E-29 2.5E-34  244.3  17.0  181  148-331    29-223 (496)
125 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.8E-29 3.9E-34  229.3  17.1  172  151-328     6-179 (309)
126 cd05607 STKc_GRK7 Catalytic do 100.0 3.7E-29 8.1E-34  223.7  18.9  168  159-331     1-172 (277)
127 cd05033 PTKc_EphR Catalytic do 100.0 2.8E-29 6.2E-34  222.9  17.7  176  151-331     4-186 (266)
128 cd08529 STKc_FA2-like Catalyti 100.0 3.5E-29 7.7E-34  220.6  18.1  176  152-331     1-179 (256)
129 cd05068 PTKc_Frk_like Catalyti 100.0 2.2E-29 4.7E-34  223.0  16.8  178  149-331     4-182 (261)
130 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-29 5.4E-34  225.3  17.3  178  151-331     5-204 (283)
131 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.2E-29 6.9E-34  224.7  18.0  177  151-332     4-190 (284)
132 cd06645 STKc_MAP4K3 Catalytic  100.0   2E-29 4.3E-34  223.9  16.3  170  151-326     9-179 (267)
133 cd05632 STKc_GRK5 Catalytic do 100.0 5.2E-29 1.1E-33  223.7  19.0  175  153-332     2-180 (285)
134 cd08228 STKc_Nek6 Catalytic do 100.0 3.4E-29 7.3E-34  222.3  17.5  178  151-331     2-184 (267)
135 cd05630 STKc_GRK6 Catalytic do 100.0 5.3E-29 1.1E-33  223.7  18.6  175  153-332     2-180 (285)
136 KOG0033 Ca2+/calmodulin-depend 100.0 7.2E-32 1.6E-36  224.6  -0.0  176  150-332    10-191 (355)
137 cd06643 STKc_SLK Catalytic dom 100.0 5.3E-29 1.1E-33  223.1  18.5  169  153-326     7-176 (282)
138 cd06624 STKc_ASK Catalytic dom 100.0 5.5E-29 1.2E-33  221.3  18.1  178  147-329     4-185 (268)
139 cd06644 STKc_STK10_LOK Catalyt 100.0 7.5E-29 1.6E-33  223.3  19.2  173  151-328    12-185 (292)
140 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-29 5.2E-34  225.0  15.7  174  150-328     4-178 (280)
141 cd07861 STKc_CDK1_euk Catalyti 100.0   6E-29 1.3E-33  222.8  18.3  174  152-329     1-177 (285)
142 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.9E-29 2.1E-33  219.1  19.0  178  151-331     2-184 (267)
143 cd05061 PTKc_InsR Catalytic do 100.0 3.4E-29 7.3E-34  225.2  16.1  182  148-332     3-200 (288)
144 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.2E-29 9.1E-34  220.8  16.5  176  151-332     4-180 (256)
145 cd05048 PTKc_Ror Catalytic Dom 100.0 4.8E-29   1E-33  223.3  17.0  179  151-332     5-205 (283)
146 cd05049 PTKc_Trk Catalytic dom 100.0 3.4E-29 7.3E-34  223.8  16.0  179  151-332     5-203 (280)
147 cd05093 PTKc_TrkB Catalytic do 100.0 5.2E-29 1.1E-33  223.9  17.3  179  151-332     5-201 (288)
148 KOG0610 Putative serine/threon 100.0 2.4E-29 5.3E-34  223.5  14.7  145  152-300    78-226 (459)
149 KOG0986 G protein-coupled rece 100.0 4.7E-30   1E-34  230.1  10.0  176  151-331   185-364 (591)
150 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-28 2.8E-33  220.4  19.4  169  151-331     1-171 (279)
151 cd06656 STKc_PAK3 Catalytic do 100.0 7.6E-29 1.6E-33  224.0  18.0  175  150-331    18-193 (297)
152 cd06615 PKc_MEK Catalytic doma 100.0 8.8E-29 1.9E-33  224.7  18.5  174  151-331     1-176 (308)
153 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-28 3.1E-33  216.9  19.2  176  152-331     1-178 (255)
154 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.5E-29 1.4E-33  219.8  16.6  177  149-331     4-181 (260)
155 cd06654 STKc_PAK1 Catalytic do 100.0 8.3E-29 1.8E-33  223.6  17.6  173  151-330    20-193 (296)
156 PHA03211 serine/threonine kina 100.0   6E-29 1.3E-33  236.3  17.4  169  151-331   169-340 (461)
157 cd05580 STKc_PKA Catalytic dom 100.0   1E-28 2.2E-33  222.3  17.8  172  151-331     1-176 (290)
158 cd05066 PTKc_EphR_A Catalytic  100.0 7.8E-29 1.7E-33  220.2  16.8  176  151-331     4-187 (267)
159 cd05059 PTKc_Tec_like Catalyti 100.0 8.5E-29 1.8E-33  218.6  16.9  174  152-331     5-179 (256)
160 cd07853 STKc_NLK Catalytic dom 100.0 7.2E-29 1.6E-33  231.2  17.3  171  152-329     1-180 (372)
161 cd05054 PTKc_VEGFR Catalytic d 100.0 3.2E-29   7E-34  230.4  14.6  181  149-332     5-254 (337)
162 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 9.9E-29 2.2E-33  219.2  17.2  163  157-328     1-183 (262)
163 cd05084 PTKc_Fes Catalytic dom 100.0   1E-28 2.3E-33  217.4  17.2  170  157-331     1-174 (252)
164 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.1E-29 1.5E-33  232.7  17.0  184  146-332    32-320 (401)
165 cd05070 PTKc_Fyn_Yrk Catalytic 100.0   8E-29 1.7E-33  219.2  16.4  176  150-331     5-181 (260)
166 cd05034 PTKc_Src_like Catalyti 100.0 9.2E-29   2E-33  218.8  16.7  178  149-331     4-182 (261)
167 cd05039 PTKc_Csk_like Catalyti 100.0 1.5E-28 3.3E-33  216.8  17.9  173  150-331     5-177 (256)
168 PTZ00036 glycogen synthase kin 100.0 8.1E-29 1.8E-33  235.5  17.3  171  149-328    64-245 (440)
169 KOG0579 Ste20-like serine/thre 100.0 8.9E-31 1.9E-35  242.7   3.7  172  154-330    35-207 (1187)
170 KOG0662 Cyclin-dependent kinas 100.0 7.3E-30 1.6E-34  203.7   8.4  173  152-330     3-178 (292)
171 PF00069 Pkinase:  Protein kina 100.0 6.3E-29 1.4E-33  219.3  15.2  172  153-330     1-176 (260)
172 cd06655 STKc_PAK2 Catalytic do 100.0 1.6E-28 3.4E-33  221.9  18.0  174  151-331    19-193 (296)
173 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-28   4E-33  215.4  18.0  170  157-331     1-172 (250)
174 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-28 3.5E-33  217.1  17.6  174  150-328     2-176 (262)
175 cd05111 PTK_HER3 Pseudokinase  100.0 1.4E-28 3.1E-33  220.2  17.4  175  151-331     7-189 (279)
176 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.1E-28 4.5E-33  219.3  18.4  172  151-328     1-175 (286)
177 cd07876 STKc_JNK2 Catalytic do 100.0 1.4E-28   3E-33  228.2  17.8  173  149-331    19-200 (359)
178 cd05052 PTKc_Abl Catalytic dom 100.0 7.6E-29 1.7E-33  219.8  15.4  176  151-331     6-183 (263)
179 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-28 5.5E-33  216.1  18.7  175  151-331     2-185 (263)
180 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0   1E-28 2.2E-33  220.6  16.2  162  158-328     2-195 (274)
181 cd08229 STKc_Nek7 Catalytic do 100.0 8.3E-29 1.8E-33  219.8  15.6  178  151-331     2-184 (267)
182 cd05071 PTKc_Src Catalytic dom 100.0 1.3E-28 2.8E-33  218.4  16.6  176  150-331     5-181 (262)
183 cd05097 PTKc_DDR_like Catalyti 100.0   1E-28 2.2E-33  222.8  16.1  180  150-332     4-210 (295)
184 cd05053 PTKc_FGFR Catalytic do 100.0 1.1E-28 2.4E-33  222.1  16.3  182  147-331     8-212 (293)
185 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-28 3.7E-33  220.9  17.4  178  151-331     5-203 (291)
186 cd06612 STKc_MST1_2 Catalytic  100.0 1.8E-28 3.9E-33  216.1  17.2  175  150-331     2-177 (256)
187 cd08221 STKc_Nek9 Catalytic do 100.0 3.1E-28 6.8E-33  214.7  18.7  176  152-331     1-179 (256)
188 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0   2E-28 4.3E-33  219.7  17.6  175  152-331     5-190 (284)
189 PHA03209 serine/threonine kina 100.0 1.3E-28 2.7E-33  228.3  16.8  171  149-332    64-235 (357)
190 KOG0690 Serine/threonine prote 100.0 5.2E-30 1.1E-34  221.4   7.0  177  150-332   167-347 (516)
191 KOG0584 Serine/threonine prote 100.0 7.2E-30 1.6E-34  237.3   8.4  169  156-331    45-221 (632)
192 cd05103 PTKc_VEGFR2 Catalytic  100.0 8.7E-29 1.9E-33  228.2  15.4  180  149-331     5-259 (343)
193 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.4E-28 3.1E-33  220.6  16.3  176  151-330     1-178 (286)
194 KOG4257 Focal adhesion tyrosin 100.0 1.8E-29 3.9E-34  233.8  10.5  178  149-332   387-571 (974)
195 cd06631 STKc_YSK4 Catalytic do 100.0   3E-28 6.4E-33  216.1  18.0  174  152-331     1-186 (265)
196 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-28 4.7E-33  218.8  17.1  176  150-331     6-189 (279)
197 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-28 2.8E-33  223.5  15.9  179  150-331    17-220 (307)
198 cd07873 STKc_PCTAIRE1 Catalyti 100.0   2E-28 4.2E-33  221.6  17.1  172  151-328     6-179 (301)
199 cd05115 PTKc_Zap-70 Catalytic  100.0 3.1E-28 6.8E-33  215.3  18.0  167  159-331     3-176 (257)
200 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-28 4.8E-33  221.5  17.1  179  149-331    33-221 (302)
201 cd05051 PTKc_DDR Catalytic dom 100.0 2.5E-28 5.3E-33  220.1  17.3  179  150-331     4-210 (296)
202 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.1E-28 4.6E-33  221.6  16.9  181  148-331    12-217 (304)
203 cd05046 PTK_CCK4 Pseudokinase  100.0 2.3E-28 5.1E-33  217.9  16.9  177  151-330     5-195 (275)
204 cd05032 PTKc_InsR_like Catalyt 100.0 1.4E-28 3.1E-33  219.4  15.5  179  150-331     5-199 (277)
205 cd00192 PTKc Catalytic domain  100.0 3.1E-28 6.8E-33  214.7  17.5  172  157-331     1-185 (262)
206 cd06652 STKc_MEKK2 Catalytic d 100.0 3.8E-28 8.1E-33  215.5  18.0  175  151-331     2-187 (265)
207 cd05088 PTKc_Tie2 Catalytic do 100.0 1.7E-28 3.7E-33  222.3  16.1  177  151-331     7-201 (303)
208 KOG0667 Dual-specificity tyros 100.0 9.5E-29 2.1E-33  231.4  14.7  173  151-332   186-367 (586)
209 cd05089 PTKc_Tie1 Catalytic do 100.0 2.5E-28 5.4E-33  220.6  17.1  177  151-331     2-196 (297)
210 cd05042 PTKc_Aatyk Catalytic d 100.0 1.9E-28 4.2E-33  217.9  16.1  167  158-327     2-176 (269)
211 cd06637 STKc_TNIK Catalytic do 100.0 1.8E-28 3.9E-33  218.2  15.9  175  148-327     3-185 (272)
212 cd05065 PTKc_EphR_B Catalytic  100.0 2.5E-28 5.5E-33  217.1  16.7  176  151-331     4-189 (269)
213 cd05045 PTKc_RET Catalytic dom 100.0 3.5E-28 7.6E-33  218.7  17.7  177  152-331     1-207 (290)
214 cd05037 PTK_Jak_rpt1 Pseudokin 100.0   2E-28 4.3E-33  216.1  15.7  161  157-328     1-179 (259)
215 cd05092 PTKc_TrkA Catalytic do 100.0 2.7E-28 5.8E-33  218.5  16.6  178  151-331     5-202 (280)
216 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.6E-28 5.6E-33  222.2  16.8  181  148-331     9-214 (314)
217 cd08223 STKc_Nek4 Catalytic do 100.0 6.3E-28 1.4E-32  212.8  18.8  176  152-331     1-180 (257)
218 cd05091 PTKc_Ror2 Catalytic do 100.0 1.5E-28 3.3E-33  220.1  14.9  177  152-331     6-204 (283)
219 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.4E-28 7.3E-33  216.4  17.0  167  158-327     2-176 (269)
220 cd06632 STKc_MEKK1_plant Catal 100.0 4.6E-28   1E-32  213.6  17.5  171  152-329     1-177 (258)
221 cd07844 STKc_PCTAIRE_like Cata 100.0 4.1E-28 8.9E-33  218.2  17.4  172  151-328     5-178 (291)
222 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-28 2.8E-33  222.0  14.0  170  155-331    26-196 (292)
223 cd06628 STKc_MAPKKK_Byr2_like  100.0 5.6E-28 1.2E-32  214.5  17.9  173  153-331     2-190 (267)
224 cd06609 STKc_MST3_like Catalyt 100.0 4.9E-28 1.1E-32  215.8  17.6  174  151-331     1-176 (274)
225 KOG4279 Serine/threonine prote 100.0 4.8E-29   1E-33  233.4  11.4  170  157-331   581-754 (1226)
226 cd07870 STKc_PFTAIRE2 Catalyti 100.0   6E-28 1.3E-32  217.2  18.2  173  150-328     4-178 (291)
227 cd07841 STKc_CDK7 Catalytic do 100.0 4.3E-28 9.3E-33  218.8  17.3  171  152-328     1-177 (298)
228 cd05043 PTK_Ryk Pseudokinase d 100.0 3.6E-28 7.8E-33  217.4  16.6  179  150-331     5-197 (280)
229 cd05069 PTKc_Yes Catalytic dom 100.0 4.1E-28 8.8E-33  214.8  16.8  175  151-331     6-181 (260)
230 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.1E-28 1.1E-32  215.0  17.4  177  150-331     4-188 (268)
231 cd06638 STKc_myosinIIIA Cataly 100.0 2.6E-28 5.6E-33  218.9  15.5  180  144-327    11-198 (286)
232 cd07863 STKc_CDK4 Catalytic do 100.0 5.7E-28 1.2E-32  216.9  17.8  174  152-331     1-185 (288)
233 cd06623 PKc_MAPKK_plant_like C 100.0 7.8E-28 1.7E-32  212.8  18.4  175  151-331     1-178 (264)
234 cd07874 STKc_JNK3 Catalytic do 100.0 2.5E-28 5.4E-33  226.1  15.8  173  149-331    15-196 (355)
235 PHA03207 serine/threonine kina 100.0 2.7E-28 5.8E-33  228.9  16.0  170  150-331    91-265 (392)
236 cd05095 PTKc_DDR2 Catalytic do 100.0 4.5E-28 9.8E-33  218.7  16.8  179  150-331     4-210 (296)
237 cd05073 PTKc_Hck Catalytic dom 100.0 5.2E-28 1.1E-32  214.1  16.9  177  149-331     4-181 (260)
238 cd08218 STKc_Nek1 Catalytic do 100.0 8.3E-28 1.8E-32  212.0  17.9  176  152-331     1-179 (256)
239 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-27 2.3E-32  212.8  18.7  175  151-331     2-187 (266)
240 cd05082 PTKc_Csk Catalytic dom 100.0 7.3E-28 1.6E-32  212.6  17.5  171  151-331     6-177 (256)
241 cd05050 PTKc_Musk Catalytic do 100.0   3E-28 6.5E-33  218.9  15.3  179  150-331     4-210 (288)
242 cd06659 STKc_PAK6 Catalytic do 100.0 2.1E-28 4.5E-33  221.2  14.3  170  155-331    25-195 (297)
243 cd05609 STKc_MAST Catalytic do 100.0 9.1E-28   2E-32  217.7  18.4  175  151-331     1-194 (305)
244 cd05057 PTKc_EGFR_like Catalyt 100.0 7.5E-28 1.6E-32  215.3  17.6  175  151-331     7-189 (279)
245 cd07875 STKc_JNK1 Catalytic do 100.0 5.1E-28 1.1E-32  224.8  17.1  173  149-331    22-203 (364)
246 cd05574 STKc_phototropin_like  100.0 8.8E-28 1.9E-32  218.8  18.2  177  151-331     1-210 (316)
247 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.4E-28 5.3E-33  218.9  14.3  172  151-328     1-175 (286)
248 KOG1025 Epidermal growth facto 100.0 2.9E-29 6.3E-34  238.5   8.7  171  155-331   700-878 (1177)
249 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.9E-28 1.1E-32  216.3  16.3  180  150-332     5-200 (277)
250 cd05075 PTKc_Axl Catalytic dom 100.0 7.5E-28 1.6E-32  214.2  17.3  176  154-332     2-193 (272)
251 cd05040 PTKc_Ack_like Catalyti 100.0 5.9E-28 1.3E-32  213.1  16.4  171  157-332     1-179 (257)
252 cd07868 STKc_CDK8 Catalytic do 100.0 6.2E-28 1.3E-32  219.8  17.1  168  156-329     6-191 (317)
253 cd06647 STKc_PAK_I Catalytic d 100.0 7.7E-28 1.7E-32  217.0  17.4  174  151-331    19-193 (293)
254 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.6E-28   1E-32  222.5  16.1  182  147-331     8-214 (334)
255 cd05035 PTKc_Axl_like Catalyti 100.0 9.9E-28 2.1E-32  213.4  17.8  176  153-331     1-193 (273)
256 cd07839 STKc_CDK5 Catalytic do 100.0 3.2E-28   7E-33  218.1  14.7  172  152-329     1-175 (284)
257 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.9E-28 1.3E-32  222.6  16.6  169  149-328    13-190 (343)
258 cd06642 STKc_STK25-YSK1 Cataly 100.0   3E-28 6.4E-33  217.7  14.1  173  152-331     5-179 (277)
259 cd06639 STKc_myosinIIIB Cataly 100.0 7.3E-28 1.6E-32  216.7  16.8  183  143-329    14-204 (291)
260 cd06640 STKc_MST4 Catalytic do 100.0 1.2E-27 2.6E-32  213.8  18.0  173  152-331     5-179 (277)
261 cd06626 STKc_MEKK4 Catalytic d 100.0 1.2E-27 2.7E-32  211.7  17.9  172  152-329     1-179 (264)
262 cd07836 STKc_Pho85 Catalytic d 100.0 9.8E-28 2.1E-32  214.8  17.4  173  152-328     1-175 (284)
263 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-27 2.9E-32  210.1  17.8  170  157-331     1-173 (251)
264 cd06641 STKc_MST3 Catalytic do 100.0 2.2E-27 4.8E-32  212.1  19.4  173  152-331     5-179 (277)
265 KOG4278 Protein tyrosine kinas 100.0 3.6E-29 7.7E-34  231.8   7.6  182  144-330   260-443 (1157)
266 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-27 2.4E-32  238.1  18.8  172  151-328     4-179 (669)
267 KOG0587 Traf2- and Nck-interac 100.0 6.8E-28 1.5E-32  231.0  16.5  187  142-333    10-203 (953)
268 cd07843 STKc_CDC2L1 Catalytic  100.0 9.7E-28 2.1E-32  216.1  16.6  173  151-329     5-182 (293)
269 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-27 3.2E-32  212.5  17.5  171  157-331     1-189 (270)
270 cd07860 STKc_CDK2_3 Catalytic  100.0 8.2E-28 1.8E-32  215.4  16.0  173  152-329     1-176 (284)
271 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.2E-27 2.6E-32  214.4  17.0  171  154-331     7-188 (283)
272 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-27 2.7E-32  211.3  16.9  167  158-331     2-176 (257)
273 cd05086 PTKc_Aatyk2 Catalytic  100.0 8.5E-28 1.8E-32  213.8  15.8  167  158-327     2-175 (268)
274 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-27 2.5E-32  214.7  16.7  172  151-328     1-176 (288)
275 cd06630 STKc_MEKK1 Catalytic d 100.0   1E-27 2.2E-32  212.8  16.3  174  152-331     1-186 (268)
276 cd05112 PTKc_Itk Catalytic dom 100.0 1.5E-27 3.3E-32  210.3  17.3  175  151-331     4-179 (256)
277 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.3E-28 1.8E-32  215.6  15.6  174  151-331     5-180 (284)
278 cd06917 STKc_NAK1_like Catalyt 100.0 1.8E-27 3.9E-32  212.5  17.7  171  152-329     2-177 (277)
279 cd05056 PTKc_FAK Catalytic dom 100.0 1.5E-27 3.2E-32  212.3  16.7  176  150-331     5-186 (270)
280 cd07832 STKc_CCRK Catalytic do 100.0 1.7E-27 3.7E-32  213.4  17.2  172  152-329     1-176 (286)
281 cd07867 STKc_CDC2L6 Catalytic  100.0 2.3E-27 4.9E-32  216.0  18.1  168  156-329     6-191 (317)
282 cd08217 STKc_Nek2 Catalytic do 100.0 1.9E-27 4.2E-32  210.2  17.0  177  152-331     1-188 (265)
283 cd05058 PTKc_Met_Ron Catalytic 100.0 1.7E-27 3.6E-32  210.8  16.5  170  157-331     1-180 (262)
284 cd06614 STKc_PAK Catalytic dom 100.0 2.2E-27 4.7E-32  213.1  17.5  178  149-332    17-195 (286)
285 cd06648 STKc_PAK_II Catalytic  100.0 2.7E-27   6E-32  212.5  18.1  173  152-331    20-193 (285)
286 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-27 6.3E-32  209.5  18.1  175  151-328     1-181 (267)
287 cd06608 STKc_myosinIII_like Ca 100.0 1.1E-27 2.4E-32  213.0  15.5  176  149-328     4-188 (275)
288 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.5E-27 5.5E-32  211.9  17.8  176  151-331     4-190 (284)
289 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.9E-28 8.4E-33  214.8  12.3  164  157-329     1-180 (258)
290 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-27 2.9E-32  216.4  16.0  175  151-331     7-189 (303)
291 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.3E-27 7.2E-32  209.4  18.0  175  151-331     2-187 (264)
292 smart00219 TyrKc Tyrosine kina 100.0 2.9E-27 6.4E-32  208.3  17.5  174  154-331     2-182 (258)
293 cd05578 STKc_Yank1 Catalytic d 100.0 7.4E-28 1.6E-32  212.7  13.7  172  152-330     1-176 (258)
294 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.1E-27 6.7E-32  211.5  17.9  173  151-327     1-177 (283)
295 cd08227 PK_STRAD_alpha Pseudok 100.0 2.8E-27   6E-32  216.7  17.9  169  156-328     3-183 (327)
296 cd05060 PTKc_Syk_like Catalyti 100.0 3.5E-27 7.7E-32  208.3  17.9  168  157-331     1-176 (257)
297 KOG4717 Serine/threonine prote 100.0 3.9E-28 8.5E-33  220.8  11.8  175  151-331    18-196 (864)
298 cd05083 PTKc_Chk Catalytic dom 100.0 1.8E-27 3.9E-32  209.8  15.9  170  151-331     6-175 (254)
299 cd08220 STKc_Nek8 Catalytic do 100.0   4E-27 8.7E-32  207.5  18.0  175  152-331     1-179 (256)
300 cd06627 STKc_Cdc7_like Catalyt 100.0   6E-27 1.3E-31  205.8  18.9  173  152-330     1-176 (254)
301 cd06629 STKc_MAPKKK_Bck1_like  100.0 3.7E-27   8E-32  209.9  17.4  172  152-329     2-186 (272)
302 cd07837 STKc_CdkB_plant Cataly 100.0 3.6E-27 7.8E-32  212.4  17.3  174  151-328     1-186 (295)
303 cd08528 STKc_Nek10 Catalytic d 100.0 3.7E-27   8E-32  209.5  17.0  177  152-331     1-191 (269)
304 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-27 2.5E-32  212.1  13.7  174  151-331     1-177 (265)
305 KOG0612 Rho-associated, coiled 100.0 5.9E-29 1.3E-33  243.5   5.8  179  143-327    67-250 (1317)
306 cd06607 STKc_TAO Catalytic dom 100.0 6.9E-27 1.5E-31  212.1  19.0  167  150-326    14-184 (307)
307 cd07842 STKc_CDK8_like Catalyt  99.9   3E-27 6.6E-32  214.9  16.5  173  152-328     1-190 (316)
308 PTZ00266 NIMA-related protein   99.9 1.7E-27 3.7E-32  238.4  16.1  181  147-328     9-216 (1021)
309 cd05613 STKc_MSK1_N N-terminal  99.9   4E-27 8.6E-32  211.8  17.0  171  152-328     1-181 (290)
310 cd06636 STKc_MAP4K4_6 Catalyti  99.9 3.9E-27 8.6E-32  210.9  16.8  180  143-327     8-195 (282)
311 PLN00009 cyclin-dependent kina  99.9 6.5E-27 1.4E-31  210.8  18.1  173  151-328     2-178 (294)
312 PTZ00284 protein kinase; Provi  99.9 2.4E-27 5.2E-32  227.3  16.1  177  145-332   123-324 (467)
313 cd06657 STKc_PAK4 Catalytic do  99.9 3.4E-27 7.3E-32  212.8  16.1  169  156-331    25-194 (292)
314 KOG0199 ACK and related non-re  99.9 2.4E-28 5.1E-33  228.9   8.8  172  155-331   114-293 (1039)
315 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 6.7E-27 1.4E-31  210.1  17.9  176  151-331     1-181 (287)
316 cd08225 STKc_Nek5 Catalytic do  99.9   3E-27 6.6E-32  208.3  15.3  176  152-331     1-180 (257)
317 cd05122 PKc_STE Catalytic doma  99.9 1.3E-26 2.8E-31  203.0  19.0  173  152-330     1-174 (253)
318 cd05577 STKc_GRK Catalytic dom  99.9 5.2E-27 1.1E-31  209.7  16.7  168  159-331     1-172 (277)
319 KOG0607 MAP kinase-interacting  99.9 7.6E-28 1.6E-32  207.6  10.7  173  156-334    83-269 (463)
320 cd08215 STKc_Nek Catalytic dom  99.9 8.6E-27 1.9E-31  205.0  17.7  177  152-331     1-181 (258)
321 cd05572 STKc_cGK_PKG Catalytic  99.9   7E-27 1.5E-31  206.9  17.2  166  159-331     1-170 (262)
322 cd07835 STKc_CDK1_like Catalyt  99.9   6E-27 1.3E-31  209.7  16.7  171  153-328     1-174 (283)
323 PHA03210 serine/threonine kina  99.9 1.8E-27   4E-32  229.6  14.1  179  148-331   145-346 (501)
324 cd07845 STKc_CDK10 Catalytic d  99.9 7.7E-27 1.7E-31  211.9  16.8  173  150-328     6-183 (309)
325 cd05633 STKc_GRK3 Catalytic do  99.9 1.1E-26 2.4E-31  208.0  17.3  163  158-328     1-170 (279)
326 PRK09188 serine/threonine prot  99.9 9.5E-27 2.1E-31  213.0  17.0  165  148-329    15-196 (365)
327 cd05579 STKc_MAST_like Catalyt  99.9 4.4E-27 9.6E-32  207.8  14.4  167  159-331     1-179 (265)
328 KOG0200 Fibroblast/platelet-de  99.9 2.7E-27 5.9E-32  232.3  13.9  185  145-332   290-500 (609)
329 KOG0666 Cyclin C-dependent kin  99.9 3.2E-28 6.9E-33  209.2   6.3  177  150-330    23-216 (438)
330 KOG1035 eIF-2alpha kinase GCN2  99.9 1.1E-27 2.5E-32  236.2  10.8  182  147-333   475-795 (1351)
331 KOG2345 Serine/threonine prote  99.9   1E-27 2.3E-32  200.1   8.9  181  149-330    19-215 (302)
332 cd06635 STKc_TAO1 Catalytic do  99.9 3.3E-26 7.2E-31  208.7  19.5  165  152-326    26-194 (317)
333 cd05044 PTKc_c-ros Catalytic d  99.9   6E-27 1.3E-31  208.1  14.2  173  157-332     1-192 (269)
334 cd06606 STKc_MAPKKK Catalytic   99.9 3.1E-26 6.8E-31  201.4  18.4  173  152-330     1-180 (260)
335 cd05581 STKc_PDK1 Catalytic do  99.9 6.9E-27 1.5E-31  208.6  14.3  175  151-331     1-200 (280)
336 cd07864 STKc_CDK12 Catalytic d  99.9 1.7E-26 3.7E-31  208.7  17.0  176  147-328     3-192 (302)
337 cd05606 STKc_beta_ARK Catalyti  99.9 2.8E-26 6.1E-31  205.2  18.2  163  158-328     1-170 (278)
338 cd07850 STKc_JNK Catalytic dom  99.9 1.9E-26   4E-31  213.5  17.3  173  149-331    14-195 (353)
339 cd07840 STKc_CDK9_like Catalyt  99.9 3.3E-26 7.1E-31  204.9  17.1  170  153-328     1-176 (287)
340 cd05074 PTKc_Tyro3 Catalytic d  99.9 3.4E-26 7.3E-31  203.7  17.0  176  153-331     1-193 (273)
341 cd07865 STKc_CDK9 Catalytic do  99.9 3.1E-26 6.7E-31  207.6  16.8  174  150-329    11-199 (310)
342 PLN03224 probable serine/threo  99.9 2.3E-26   5E-31  219.0  16.5  177  149-328   143-385 (507)
343 cd07849 STKc_ERK1_2_like Catal  99.9 2.4E-26 5.1E-31  211.3  16.0  171  150-328     4-184 (336)
344 cd05611 STKc_Rim15_like Cataly  99.9   5E-26 1.1E-30  201.3  17.3  164  157-330     2-170 (260)
345 KOG1152 Signal transduction se  99.9 5.8E-27 1.3E-31  215.6  11.3  172  151-330   561-745 (772)
346 cd07858 STKc_TEY_MAPK_plant Ca  99.9 2.2E-26 4.8E-31  211.6  15.1  172  150-328     4-183 (337)
347 cd07852 STKc_MAPK15 Catalytic   99.9 2.5E-26 5.4E-31  211.2  15.4  172  149-328     5-187 (337)
348 PTZ00024 cyclin-dependent prot  99.9 4.1E-26 8.9E-31  209.6  16.6  172  151-329     8-209 (335)
349 cd08530 STKc_CNK2-like Catalyt  99.9 2.5E-26 5.4E-31  202.3  14.5  175  152-331     1-179 (256)
350 cd07834 STKc_MAPK Catalytic do  99.9 2.3E-26 4.9E-31  210.7  14.7  170  152-328     1-181 (330)
351 PHA03390 pk1 serine/threonine-  99.9 1.4E-25 3.1E-30  199.5  19.1  168  149-331    12-184 (267)
352 cd06633 STKc_TAO3 Catalytic do  99.9 1.6E-25 3.5E-30  203.8  19.6  165  153-327    23-191 (313)
353 cd07880 STKc_p38gamma_MAPK12 C  99.9 6.5E-26 1.4E-30  209.0  17.2  171  147-328    11-190 (343)
354 cd07831 STKc_MOK Catalytic dom  99.9 7.6E-26 1.6E-30  202.3  17.0  168  153-328     1-173 (282)
355 cd05583 STKc_MSK_N N-terminal   99.9 4.7E-26   1E-30  204.6  15.4  172  152-329     1-182 (288)
356 cd07855 STKc_ERK5 Catalytic do  99.9 3.7E-26 8.1E-31  209.8  15.0  171  150-327     4-185 (334)
357 KOG4645 MAPKKK (MAP kinase kin  99.9   1E-27 2.2E-32  237.6   4.6  175  149-329  1233-1414(1509)
358 cd07877 STKc_p38alpha_MAPK14 C  99.9 1.2E-25 2.5E-30  207.5  17.8  174  143-327     9-191 (345)
359 KOG0696 Serine/threonine prote  99.9   2E-27 4.4E-32  211.1   5.6  177  150-332   348-529 (683)
360 cd07829 STKc_CDK_like Catalyti  99.9 4.3E-26 9.3E-31  203.7  14.3  170  153-328     1-173 (282)
361 KOG0984 Mitogen-activated prot  99.9 6.4E-27 1.4E-31  190.6   8.0  185  146-334    41-230 (282)
362 cd07830 STKc_MAK_like Catalyti  99.9 7.8E-26 1.7E-30  202.4  15.8  170  153-328     1-173 (283)
363 cd05118 STKc_CMGC Catalytic do  99.9 7.2E-26 1.6E-30  202.4  15.5  170  153-328     1-173 (283)
364 cd05123 STKc_AGC Catalytic dom  99.9 9.9E-26 2.2E-30  197.8  15.8  166  159-330     1-170 (250)
365 cd06616 PKc_MKK4 Catalytic dom  99.9 6.1E-26 1.3E-30  203.8  14.7  172  152-328     5-182 (288)
366 KOG1151 Tousled-like protein k  99.9 6.6E-27 1.4E-31  209.5   8.3  174  151-328   463-655 (775)
367 cd07838 STKc_CDK4_6_like Catal  99.9   2E-25 4.3E-30  199.9  17.9  173  153-331     1-184 (287)
368 cd06634 STKc_TAO2 Catalytic do  99.9 1.2E-25 2.5E-30  204.2  16.6  167  151-327    15-185 (308)
369 KOG0983 Mitogen-activated prot  99.9 9.4E-27   2E-31  197.0   8.5  175  155-335    96-273 (391)
370 cd06618 PKc_MKK7 Catalytic dom  99.9 1.2E-25 2.7E-30  202.8  15.9  174  150-329    14-190 (296)
371 cd08216 PK_STRAD Pseudokinase   99.9   1E-25 2.2E-30  204.9  15.3  168  156-328     7-183 (314)
372 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 2.5E-25 5.4E-30  203.9  17.7  169  148-327     7-179 (328)
373 KOG0604 MAP kinase-activated p  99.9   1E-26 2.2E-31  199.0   7.3  173  150-332    60-242 (400)
374 cd08222 STKc_Nek11 Catalytic d  99.9 8.2E-26 1.8E-30  199.9  13.4  176  152-331     1-183 (260)
375 PHA02882 putative serine/threo  99.9 2.8E-25   6E-30  200.5  16.5  177  149-332    10-212 (294)
376 cd07857 STKc_MPK1 Catalytic do  99.9 2.6E-25 5.7E-30  204.0  16.6  170  152-328     1-184 (332)
377 KOG0608 Warts/lats-like serine  99.9 5.3E-26 1.2E-30  211.2  11.4  143  152-300   630-776 (1034)
378 cd07879 STKc_p38delta_MAPK13 C  99.9   3E-25 6.5E-30  204.5  16.5  167  150-328    14-189 (342)
379 cd08226 PK_STRAD_beta Pseudoki  99.9 3.3E-25 7.2E-30  203.0  15.9  167  158-328     5-183 (328)
380 cd07866 STKc_BUR1 Catalytic do  99.9 2.4E-25 5.3E-30  201.8  14.5  173  150-328     7-201 (311)
381 KOG0695 Serine/threonine prote  99.9 4.7E-26   1E-30  197.8   9.2  177  149-331   248-429 (593)
382 cd07854 STKc_MAPK4_6 Catalytic  99.9 4.3E-25 9.3E-30  203.5  14.5  171  150-328     4-193 (342)
383 KOG1006 Mitogen-activated prot  99.9 8.4E-27 1.8E-31  196.6   2.4  174  152-330    65-244 (361)
384 cd05576 STKc_RPK118_like Catal  99.9   9E-25   2E-29  190.9  14.7  156  162-331     4-160 (237)
385 KOG1024 Receptor-like protein   99.9 5.2E-25 1.1E-29  194.6  12.8  186  144-332   277-477 (563)
386 cd07851 STKc_p38 Catalytic dom  99.9 6.6E-25 1.4E-29  202.3  12.9  169  149-328    13-190 (343)
387 KOG0614 cGMP-dependent protein  99.9 2.1E-26 4.6E-31  209.2   1.6  173  152-331   421-597 (732)
388 KOG0596 Dual specificity; seri  99.9 9.8E-25 2.1E-29  200.2  12.3  174  151-331   361-539 (677)
389 PLN03225 Serine/threonine-prot  99.9 1.6E-24 3.4E-29  211.0  14.1  173  149-328   130-332 (566)
390 KOG0669 Cyclin T-dependent kin  99.9 8.5E-27 1.8E-31  195.2  -2.1  171  153-329    19-204 (376)
391 KOG0576 Mitogen-activated prot  99.9 3.8E-26 8.2E-31  213.3   1.9  176  149-330    13-189 (829)
392 KOG1027 Serine/threonine prote  99.9 2.6E-24 5.6E-29  205.7  12.8  171  153-331   511-692 (903)
393 smart00221 STYKc Protein kinas  99.9 2.5E-23 5.4E-28  179.2  17.3  169  153-326     1-172 (225)
394 KOG0664 Nemo-like MAPK-related  99.9 6.9E-26 1.5E-30  191.8  -0.4  170  154-330    56-234 (449)
395 cd05147 RIO1_euk RIO kinase fa  99.9   7E-24 1.5E-28  178.7  11.8  139  156-303     2-167 (190)
396 smart00220 S_TKc Serine/Threon  99.9 3.6E-23 7.9E-28  179.8  14.9  162  163-331     1-164 (244)
397 cd00180 PKc Catalytic domain o  99.9 1.5E-22 3.3E-27  171.5  18.4  165  159-328     1-168 (215)
398 cd05145 RIO1_like RIO kinase f  99.9   9E-23   2E-27  172.3  14.9  140  156-304     2-168 (190)
399 KOG0668 Casein kinase II, alph  99.9 1.7E-23 3.7E-28  173.2   5.7  171  150-333    37-212 (338)
400 KOG0603 Ribosomal protein S6 k  99.9 9.2E-23   2E-27  190.8   9.4  170  149-332   320-492 (612)
401 KOG1345 Serine/threonine kinas  99.9 2.9E-22 6.3E-27  169.7   8.8  172  149-331    22-198 (378)
402 KOG0671 LAMMER dual specificit  99.9   1E-21 2.2E-26  173.5  11.5  176  147-331    85-287 (415)
403 PRK10345 hypothetical protein;  99.9   5E-21 1.1E-25  163.0  14.8  136  154-300     5-157 (210)
404 KOG0665 Jun-N-terminal kinase   99.9 2.8E-22 6.1E-27  173.3   6.6  169  152-331    18-195 (369)
405 smart00090 RIO RIO-like kinase  99.8   3E-20 6.6E-25  161.8  12.8  142  152-304    29-199 (237)
406 KOG1164 Casein kinase (serine/  99.8 5.7E-20 1.2E-24  167.9  14.1  176  152-332    19-216 (322)
407 PRK12274 serine/threonine prot  99.8 9.7E-20 2.1E-24  152.8  14.1  132  155-304     6-143 (218)
408 KOG0670 U4/U6-associated splic  99.8   8E-21 1.7E-25  173.5   8.0  184  141-331   422-613 (752)
409 PRK10359 lipopolysaccharide co  99.8 6.1E-20 1.3E-24  157.1  12.8  140  148-303    28-184 (232)
410 PRK14879 serine/threonine prot  99.8   1E-19 2.2E-24  156.1  13.4  135  157-303     2-144 (211)
411 cd05144 RIO2_C RIO kinase fami  99.8 1.8E-19 3.8E-24  153.2  13.3  143  147-305    11-177 (198)
412 PRK09605 bifunctional UGMP fam  99.8 1.6E-19 3.5E-24  175.7  14.8  138  151-304   333-478 (535)
413 TIGR03724 arch_bud32 Kae1-asso  99.8   3E-19 6.4E-24  151.8  12.0  131  158-303     1-139 (199)
414 KOG1167 Serine/threonine prote  99.8 9.3E-20   2E-24  163.0   8.9  144  147-301    32-181 (418)
415 COG0515 SPS1 Serine/threonine   99.8 1.7E-18 3.7E-23  156.1  17.2  171  153-328     2-183 (384)
416 KOG1163 Casein kinase (serine/  99.8 1.7E-18 3.7E-23  144.7  10.2  170  150-327    14-195 (341)
417 KOG1165 Casein kinase (serine/  99.8 3.2E-18   7E-23  149.1  11.5  172  152-331    29-214 (449)
418 cd05120 APH_ChoK_like Aminogly  99.8 4.6E-18   1E-22  137.1  11.7  135  156-303     3-139 (155)
419 KOG1166 Mitotic checkpoint ser  99.7 2.1E-18 4.4E-23  172.0   8.7  179  144-331   691-881 (974)
420 cd05119 RIO RIO kinase family,  99.7 1.4E-17 2.9E-22  140.1  11.7  136  156-304     2-165 (187)
421 KOG1290 Serine/threonine prote  99.7 1.6E-17 3.4E-22  151.1  11.3  134  151-289    78-224 (590)
422 PRK01723 3-deoxy-D-manno-octul  99.7 1.2E-16 2.5E-21  139.5  14.2  137  156-304    36-193 (239)
423 PLN00181 protein SPA1-RELATED;  99.7 4.3E-18 9.2E-23  173.3   5.5  123  203-331    28-193 (793)
424 KOG0590 Checkpoint kinase and   99.7 3.4E-17 7.4E-22  159.6   6.6  173  154-333   321-504 (601)
425 TIGR01982 UbiB 2-polyprenylphe  99.6 4.3E-15 9.4E-20  140.5  13.6  141  156-304   122-308 (437)
426 KOG0195 Integrin-linked kinase  99.6 1.9E-16   4E-21  134.8   2.1  165  156-330   195-363 (448)
427 KOG0603 Ribosomal protein S6 k  99.5 7.2E-16 1.6E-20  144.8   0.4  159  158-326     1-166 (612)
428 KOG1240 Protein kinase contain  99.5 2.8E-15 6.2E-20  148.1   0.2  169  152-328    24-202 (1431)
429 PRK04750 ubiB putative ubiquin  99.5 4.1E-14   9E-19  135.6   7.5  145  149-304   118-315 (537)
430 cd05151 ChoK Choline Kinase (C  99.5 1.9E-13 4.1E-18  112.9   9.2  131  156-302     3-136 (170)
431 cd05146 RIO3_euk RIO kinase fa  99.4 5.3E-12 1.1E-16  105.9  14.3  136  157-304     3-175 (197)
432 smart00750 KIND kinase non-cat  99.4   6E-13 1.3E-17  110.5   8.0   82  232-331     1-82  (176)
433 PF14531 Kinase-like:  Kinase-l  99.4 1.9E-12 4.2E-17  114.3  10.9  167  154-327    15-216 (288)
434 KOG1023 Natriuretic peptide re  99.4 6.5E-13 1.4E-17  124.6   7.0  125  201-330     1-128 (484)
435 cd05154 ACAD10_11_like Acyl-Co  99.4 7.1E-12 1.5E-16  107.9  12.6  142  157-302     4-206 (223)
436 KOG4158 BRPK/PTEN-induced prot  99.3 4.8E-12   1E-16  113.4   8.5  115  205-327   274-425 (598)
437 KOG1033 eIF-2alpha kinase PEK/  99.3 6.1E-13 1.3E-17  123.1   0.5  106  221-332   330-441 (516)
438 COG3642 Mn2+-dependent serine/  99.2 1.1E-10 2.4E-15   95.1  12.1  132  158-304     3-142 (204)
439 KOG0606 Microtubule-associated  99.2 5.6E-12 1.2E-16  124.9   5.2  140  150-332    82-237 (1205)
440 KOG0590 Checkpoint kinase and   99.2 1.2E-12 2.5E-17  128.0   0.1  173  151-327    20-203 (601)
441 KOG3087 Serine/threonine prote  99.2   3E-10 6.5E-15   92.3  11.3  143  155-302    11-165 (229)
442 KOG1243 Protein kinase [Genera  99.2 2.3E-10   5E-15  109.1  11.0  122  171-302    33-154 (690)
443 PF01163 RIO1:  RIO1 family;  I  99.1 7.3E-10 1.6E-14   92.6  11.3  126  166-304     1-157 (188)
444 PRK15123 lipopolysaccharide co  99.1 2.2E-09 4.7E-14   95.0  14.7  142  156-302    27-194 (268)
445 KOG0601 Cyclin-dependent kinas  99.1 7.8E-11 1.7E-15  111.0   4.8  172  151-328   114-303 (524)
446 KOG3741 Poly(A) ribonuclease s  99.0 9.6E-09 2.1E-13   95.5  12.7  137  163-302   288-442 (655)
447 KOG1266 Protein kinase [Signal  98.9 4.3E-10 9.4E-15   98.8   3.1  126  199-325   119-254 (458)
448 COG0478 RIO-like serine/threon  98.8 4.8E-08 1.1E-12   84.5  11.9  135  153-302    93-251 (304)
449 PRK09902 hypothetical protein;  98.8 2.1E-07 4.6E-12   78.5  13.9  139  159-302    26-179 (216)
450 PF06293 Kdo:  Lipopolysacchari  98.8 1.1E-07 2.4E-12   81.2  12.4  108  191-304    55-172 (206)
451 KOG0601 Cyclin-dependent kinas  98.8 4.6E-09 9.9E-14   99.2   3.4  147  150-302   264-416 (524)
452 COG0661 AarF Predicted unusual  98.7   1E-07 2.2E-12   91.3  10.3  140  157-304   131-316 (517)
453 TIGR02172 Fb_sc_TIGR02172 Fibr  98.7   5E-07 1.1E-11   78.2  13.3  139  157-302     7-182 (226)
454 PF06176 WaaY:  Lipopolysacchar  98.6 1.9E-06 4.1E-11   73.1  14.2  139  148-302    28-183 (229)
455 PF01636 APH:  Phosphotransfera  98.6 1.3E-06 2.8E-11   75.4  13.1  144  156-302     2-197 (239)
456 COG1718 RIO1 Serine/threonine   98.6 1.2E-06 2.6E-11   75.2  12.2  152  142-304    36-217 (268)
457 cd05150 APH Aminoglycoside 3'-  98.5 1.9E-06 4.2E-11   75.4  12.4  140  159-302     6-193 (244)
458 PF12260 PIP49_C:  Protein-kina  98.5 8.5E-07 1.8E-11   74.4   8.9  102  195-300     7-109 (188)
459 PLN02876 acyl-CoA dehydrogenas  98.4   8E-06 1.7E-10   83.9  14.6  147  156-302    43-257 (822)
460 KOG1235 Predicted unusual prot  98.3 8.9E-06 1.9E-10   78.0  11.6  141  156-303   166-355 (538)
461 PRK10593 hypothetical protein;  98.2 5.3E-05 1.1E-09   68.4  15.1   78  154-234    17-100 (297)
462 PF10707 YrbL-PhoP_reg:  PhoP r  98.2 5.1E-05 1.1E-09   64.0  13.7  132  155-299     5-169 (199)
463 KOG0576 Mitogen-activated prot  98.1 3.2E-07 6.8E-12   87.7  -1.5  158  157-330   248-407 (829)
464 cd05155 APH_ChoK_like_1 Unchar  98.1 3.9E-05 8.6E-10   66.8  10.9   73  157-235     3-82  (235)
465 cd05157 ETNK_euk Ethanolamine   98.1 7.5E-05 1.6E-09   64.9  12.5  141  157-302     4-201 (235)
466 PF13095 FTA2:  Kinetochore Sim  98.0  0.0001 2.2E-09   62.0  11.5  125  151-300    37-206 (207)
467 TIGR02721 ycfN_thiK thiamine k  98.0 7.2E-05 1.6E-09   66.0  11.0  138  159-302     4-175 (256)
468 cd05153 HomoserineK_II Homoser  97.9 8.8E-05 1.9E-09   66.9  10.1  143  156-302    19-205 (296)
469 COG2112 Predicted Ser/Thr prot  97.9 0.00015 3.3E-09   59.2  10.0  128  155-302    26-155 (201)
470 PRK09550 mtnK methylthioribose  97.8  0.0008 1.7E-08   62.9  15.7   76  156-233    31-117 (401)
471 KOG0606 Microtubule-associated  97.8 4.2E-06 9.1E-11   84.1  -0.5  177  149-331   802-1013(1205)
472 cd05156 ChoK_euk Choline Kinas  97.7 0.00029 6.2E-09   63.7  10.8  141  157-302     4-213 (302)
473 PRK05231 homoserine kinase; Pr  97.7  0.0015 3.2E-08   59.6  15.0  142  157-302    28-217 (319)
474 TIGR00938 thrB_alt homoserine   97.7  0.0011 2.4E-08   60.1  13.7  143  156-301    27-216 (307)
475 PF03881 Fructosamin_kin:  Fruc  97.6 0.00035 7.5E-09   62.6   9.3   74  155-232    21-97  (288)
476 PLN02236 choline kinase         97.5  0.0014 3.1E-08   60.4  11.5  140  158-302    43-231 (344)
477 COG3173 Predicted aminoglycosi  97.3  0.0044 9.6E-08   56.1  12.3  137  165-303    39-229 (321)
478 KOG2270 Serine/threonine prote  97.3  0.0033 7.1E-08   57.4  10.8  139  155-302   148-313 (520)
479 PLN02756 S-methyl-5-thioribose  97.2  0.0054 1.2E-07   57.4  12.3   73  156-231    37-119 (418)
480 KOG2268 Serine/threonine prote  97.1 0.00081 1.8E-08   60.3   5.6  133  152-300    93-249 (465)
481 KOG2137 Protein kinase [Signal  97.1  0.0004 8.6E-09   67.5   3.6   69  257-327   106-183 (700)
482 cd05152 MPH2' Macrolide 2'-Pho  97.1  0.0094   2E-07   53.2  12.0   31  272-302   185-216 (276)
483 PLN02421 phosphotransferase, a  97.0  0.0077 1.7E-07   55.3  10.7  140  158-302    21-213 (330)
484 TIGR02906 spore_CotS spore coa  97.0   0.013 2.8E-07   53.0  12.0   29  272-301   187-215 (313)
485 TIGR01767 MTRK 5-methylthiorib  96.8    0.02 4.4E-07   52.7  11.8   73  158-232     2-85  (370)
486 COG5072 ALK1 Serine/threonine   96.6  0.0098 2.1E-07   54.3   8.1   73  220-303   299-371 (488)
487 COG4248 Uncharacterized protei  96.6  0.0087 1.9E-07   55.5   7.6  165  156-330    16-193 (637)
488 COG3001 Uncharacterized protei  96.5    0.03 6.5E-07   48.0  10.0   73  159-235    24-99  (286)
489 TIGR02904 spore_ysxE spore coa  96.5   0.048 1.1E-06   49.5  12.1   33  271-303   195-227 (309)
490 PF01633 Choline_kinase:  Choli  96.5  0.0096 2.1E-07   50.8   7.0   30  273-302   144-174 (211)
491 PRK11768 serine/threonine prot  96.4   0.093   2E-06   48.0  13.3   71  162-233    36-113 (325)
492 PRK06148 hypothetical protein;  96.3   0.075 1.6E-06   56.1  13.6  142  158-302    32-236 (1013)
493 COG2334 Putative homoserine ki  96.2   0.066 1.4E-06   49.0  11.4  137  163-302    37-228 (331)
494 PRK12396 5-methylribose kinase  96.0   0.035 7.5E-07   51.8   8.4   74  156-231    34-117 (409)
495 PF04478 Mid2:  Mid2 like cell   95.9  0.0085 1.8E-07   47.3   3.5   30   66-95     46-75  (154)
496 PTZ00384 choline kinase; Provi  95.8    0.11 2.3E-06   48.7  11.1   74  157-235    56-137 (383)
497 PF06679 DUF1180:  Protein of u  95.7    0.21 4.6E-06   40.4  10.6    8   91-98    114-121 (163)
498 PTZ00296 choline kinase; Provi  95.2    0.26 5.7E-06   47.1  11.6   74  156-234   110-193 (442)
499 PF07387 Seadorna_VP7:  Seadorn  95.1    0.21 4.5E-06   42.8   9.0  115  163-300    74-190 (308)
500 PF08693 SKG6:  Transmembrane a  94.9   0.018 3.9E-07   34.5   1.7   18   68-85      9-26  (40)

No 1  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=6.2e-46  Score=341.06  Aligned_cols=195  Identities=52%  Similarity=0.842  Sum_probs=172.6

Q ss_pred             ccccccHHHHHHHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEE
Q 019842          137 AISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYS  216 (335)
Q Consensus       137 ~~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  216 (335)
                      ....+++.++..+|++|...++||+|+||.||+|.++++..||||++.....+..++|.+|++++.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45678899999999999999999999999999999999999999988765443156699999999999999999999999


Q ss_pred             EeCC-eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 019842          217 AHDD-TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLS  295 (335)
Q Consensus       217 ~~~~-~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~  295 (335)
                      .+.+ ..+||||||++|+|.++|+..... +++|..|++||.++|+||+|||+.+.++|+|||||++|||||+++++||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9999 599999999999999999975433 89999999999999999999999999999999999999999999999999


Q ss_pred             cccCceeCCCCCcccccc-ccccCccccccccCCcCcc
Q 019842          296 DFGLAITDGSQNKNNLKL-SGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       296 Dfgla~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~  332 (335)
                      |||+|+............ .||.+|+|||++..|.+++
T Consensus       220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~  257 (361)
T KOG1187|consen  220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTE  257 (361)
T ss_pred             CccCcccCCccccceeeecCCCCccCChhhhccCCcCc
Confidence            999996654311111122 7999999999999988873


No 2  
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=3.3e-41  Score=298.59  Aligned_cols=174  Identities=29%  Similarity=0.429  Sum_probs=155.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .+|...+.||+|.||+||+|++. ++..||||.+...  .+...+.+..|+.+|+.++|||||+|++++++++..|||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            46777888999999999999875 5789999999765  55566778999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC------CcEEEEcccCce
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK------FNAKLSDFGLAI  301 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~------~~~kl~Dfgla~  301 (335)
                      ||++|+|..+++.   .+.+++..+..++.|+|.||++||++   +||||||||+||||+..      -.+||+|||+|+
T Consensus        90 yC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR  163 (429)
T KOG0595|consen   90 YCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR  163 (429)
T ss_pred             eCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence            9999999999974   34799999999999999999999999   99999999999999875      458999999998


Q ss_pred             eCCCCCccccccccccCccccccccCCcCc
Q 019842          302 TDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       302 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...... ...+.+|++.|||||+++.++|+
T Consensus       164 ~L~~~~-~a~tlcGSplYMAPEV~~~~~Yd  192 (429)
T KOG0595|consen  164 FLQPGS-MAETLCGSPLYMAPEVIMSQQYD  192 (429)
T ss_pred             hCCchh-HHHHhhCCccccCHHHHHhcccc
Confidence            876443 33467999999999999988875


No 3  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00  E-value=9.6e-39  Score=291.86  Aligned_cols=174  Identities=39%  Similarity=0.572  Sum_probs=150.5

Q ss_pred             cccceeeecccEEEEEEEeCCCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-eEEEEEEecC
Q 019842          154 HESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-TRFIVYELME  230 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~E~~~  230 (335)
                      ...+.+|+|+||+||+|.+.+...||||++.....  ...++|.+|+.+|++++|||||+++|+|.+.. ..++||||++
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            34566999999999999998766699999965432  22568999999999999999999999999988 7999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEecCCCCCCEEEcCCC-cEEEEcccCceeCCCCCc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPA-VIHRDLKSSNILLDSKF-NAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivHrdlk~~Nill~~~~-~~kl~Dfgla~~~~~~~~  308 (335)
                      +|+|..+++.. ....+++..+++++.|||+||.|||++   + |||||||++|||++.++ .+||+|||+++.......
T Consensus       124 ~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~  199 (362)
T KOG0192|consen  124 GGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT  199 (362)
T ss_pred             CCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence            99999999863 457899999999999999999999999   7 99999999999999997 999999999977654333


Q ss_pred             cccccccccCccccccccCC--cCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDG--MVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~--~~~  331 (335)
                      ......||+.|||||++.+.  +|+
T Consensus       200 ~~~~~~GT~~wMAPEv~~~~~~~~~  224 (362)
T KOG0192|consen  200 SMTSVAGTYRWMAPEVLRGEKSPYT  224 (362)
T ss_pred             cccCCCCCccccChhhhcCCCCcCC
Confidence            33346799999999999954  554


No 4  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=3.7e-38  Score=291.66  Aligned_cols=174  Identities=32%  Similarity=0.479  Sum_probs=158.1

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      .+|...+.||+|||+.||+++. ++|+.||+|++...   .....+.+.+||++.++|+|||||+++++|++.+..|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4688899999999999999987 88999999999653   3445677999999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      |+|++++|.+++.   ...++++.++..++.||+.||.|||++   +|+|||||..|++|+++.++||+|||||......
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence            9999999999885   456899999999999999999999999   9999999999999999999999999999887766


Q ss_pred             CccccccccccCccccccccCCcC
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      .....+.|||+.|+|||++...-+
T Consensus       172 ~Erk~TlCGTPNYIAPEVl~k~gH  195 (592)
T KOG0575|consen  172 GERKKTLCGTPNYIAPEVLNKSGH  195 (592)
T ss_pred             ccccceecCCCcccChhHhccCCC
Confidence            566668899999999999986544


No 5  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2.7e-38  Score=279.96  Aligned_cols=178  Identities=31%  Similarity=0.458  Sum_probs=152.8

Q ss_pred             HhcCCcccceeeecccEEEEEEE-eCCCceEEEEEecccC-------chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC
Q 019842          149 ATDSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCAT-------QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD  220 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  220 (335)
                      ..+.|...+.||+|+||.|-+|. .++|+.||||.+....       ......+++|+++|++|+|||||+++++++..+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            45567788999999999999995 4579999999995431       112344689999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC---CcEEEEcc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK---FNAKLSDF  297 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~---~~~kl~Df  297 (335)
                      ..||||||+++|+|.+.+-.   ...+.+.....++.|++.|+.|||++   ||+||||||+|||+..+   ..+||+||
T Consensus       250 s~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             ceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence            99999999999999998853   45678888899999999999999999   99999999999999776   77999999


Q ss_pred             cCceeCCCCCccccccccccCccccccccCCcCccc
Q 019842          298 GLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       298 gla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      |+|+..+... ...++|||+.|.|||++.++-++-|
T Consensus       324 GlAK~~g~~s-fm~TlCGTpsYvAPEVl~~kg~~~~  358 (475)
T KOG0615|consen  324 GLAKVSGEGS-FMKTLCGTPSYVAPEVLASKGVEYY  358 (475)
T ss_pred             chhhccccce-ehhhhcCCccccChhheecCCeecc
Confidence            9998887443 3456899999999999988776544


No 6  
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00  E-value=3.2e-38  Score=277.04  Aligned_cols=177  Identities=30%  Similarity=0.439  Sum_probs=158.9

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      .++|+..++||+|+||+||.++. ++++.+|+|.++..   .....+...+|..+|.+++||+||+++-.+++.+.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            46889999999999999999975 46889999998654   234567789999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +||+.||.|..+|.   +...+++..+.-++.+|+.||.|||++   +||||||||+|||||++|.++|+|||+++..-.
T Consensus       104 ld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~  177 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK  177 (357)
T ss_pred             EeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence            99999999999995   356799999999999999999999999   999999999999999999999999999987665


Q ss_pred             CCccccccccccCccccccccCCcCcc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ......+++||+.|||||++.+..|+.
T Consensus       178 ~~~~t~tfcGT~eYmAPEil~~~gy~~  204 (357)
T KOG0598|consen  178 DGDATRTFCGTPEYMAPEILLGKGYDK  204 (357)
T ss_pred             CCCccccccCCccccChHHHhcCCCCc
Confidence            555666789999999999999998764


No 7  
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=6.6e-38  Score=300.09  Aligned_cols=183  Identities=33%  Similarity=0.488  Sum_probs=156.6

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeC
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHD  219 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  219 (335)
                      +....+....+.||+|+||+||+|+..      +.+.||||.++..... ..++|++|+++++.++|||||+|+|+|.++
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            334455566788999999999999753      4568999999876555 778999999999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCC-------C----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPS-------H----GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS  288 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~-------~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~  288 (335)
                      +..+||+|||..|+|.++|....       .    ..+|+..+.+.||.|||.||+||-++   .+|||||..+|+||.+
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge  638 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE  638 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence            99999999999999999996421       1    23489999999999999999999999   9999999999999999


Q ss_pred             CCcEEEEcccCceeCCCCCccccc--cccccCccccccccCCcCcc
Q 019842          289 KFNAKLSDFGLAITDGSQNKNNLK--LSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       289 ~~~~kl~Dfgla~~~~~~~~~~~~--~~gt~~y~aPE~l~~~~~~~  332 (335)
                      +..+||+||||++.....++....  ..-..+||+||.|+.++||+
T Consensus       639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTt  684 (774)
T KOG1026|consen  639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTT  684 (774)
T ss_pred             ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccc
Confidence            999999999999887665554321  23467999999999999964


No 8  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=9.5e-38  Score=274.14  Aligned_cols=170  Identities=29%  Similarity=0.389  Sum_probs=151.0

Q ss_pred             cccceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-eEEEEEEecC
Q 019842          154 HESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-TRFIVYELME  230 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~E~~~  230 (335)
                      +..+.||+|..|+|||++++ +++.+|+|.+... .....+++.+|++++++.+||+||.++|.|..+. ...++||||+
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            34778999999999999986 5788999999544 4455688999999999999999999999999999 5999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      +|+|+..+..   .+.+++...-+|+.+|++||.|||+ +   +||||||||+|+|++..|++||+|||.+......  .
T Consensus       162 gGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~  233 (364)
T KOG0581|consen  162 GGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--I  233 (364)
T ss_pred             CCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh--h
Confidence            9999999853   3669999999999999999999996 6   9999999999999999999999999999776554  2


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..++.||..|||||.+.++.|+
T Consensus       234 a~tfvGT~~YMsPERi~g~~Ys  255 (364)
T KOG0581|consen  234 ANTFVGTSAYMSPERISGESYS  255 (364)
T ss_pred             cccccccccccChhhhcCCcCC
Confidence            2356899999999999999886


No 9  
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.3e-36  Score=273.36  Aligned_cols=167  Identities=34%  Similarity=0.562  Sum_probs=140.9

Q ss_pred             cccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhc--CCCCceeEEeeEEEeCC----eEEEEEE
Q 019842          154 HESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSN--IHHPNVVCLLGYSAHDD----TRFIVYE  227 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lv~E  227 (335)
                      +..+++|+|+||.||||.+++ +.||||++..   +..+.|.+|-++.+.  ++|+||++++++-...+    +++||+|
T Consensus       213 ~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  213 QLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             hhHHHhhcCccceeehhhccC-ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            346789999999999999965 7999999963   345667777666654  58999999999987766    8999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhC------CCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEH------CNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      |.++|+|.++|.    ...++|....+|+..+++||+|||+.      .+|+|+|||||++||||.+|+++.|+|||||.
T Consensus       289 fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl  364 (534)
T KOG3653|consen  289 FHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL  364 (534)
T ss_pred             eccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence            999999999995    35699999999999999999999974      35789999999999999999999999999996


Q ss_pred             eCCCCC--ccccccccccCccccccccCC
Q 019842          302 TDGSQN--KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       302 ~~~~~~--~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .+....  ......+||.+|||||++.+.
T Consensus       365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEga  393 (534)
T KOG3653|consen  365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGA  393 (534)
T ss_pred             EecCCCCCcchhhhhhhhhhcCHHHHhhh
Confidence            654332  222335799999999999875


No 10 
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-36  Score=278.89  Aligned_cols=173  Identities=31%  Similarity=0.424  Sum_probs=151.8

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ..+.||+|.||.||.|.++....||+|.++... ...++|.+|+++|++|+|+|||+++|+|..++.+|||||||++|+|
T Consensus       210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL  288 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL  288 (468)
T ss_pred             HHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence            467899999999999999988899999997653 3446788999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc-cc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL-KL  313 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-~~  313 (335)
                      .++|+. ..+..+...+.+.++.|||+||+||.++   ++|||||.++||||+++..+||+|||||+...+...... ..
T Consensus       289 l~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~  364 (468)
T KOG0197|consen  289 LDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG  364 (468)
T ss_pred             HHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCC
Confidence            999976 3567799999999999999999999999   999999999999999999999999999996544433221 22


Q ss_pred             ccccCccccccccCCcCcc
Q 019842          314 SGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       314 ~gt~~y~aPE~l~~~~~~~  332 (335)
                      .-...|.|||.+..++|+.
T Consensus       365 kfPIkWtAPEa~~~~~FS~  383 (468)
T KOG0197|consen  365 KFPIKWTAPEALNYGKFSS  383 (468)
T ss_pred             CCCceecCHHHHhhCCccc
Confidence            2366899999999999864


No 11 
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=6.6e-38  Score=265.31  Aligned_cols=182  Identities=29%  Similarity=0.382  Sum_probs=156.0

Q ss_pred             cCCcccceeeecccEEEEEEE-eCCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEee-EEEeCCe-EEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLG-YSAHDDT-RFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g-~~~~~~~-~~lv  225 (335)
                      .+|++.++||+|.||+|||+. +.+|..||.|.+.-.  +....++...|+.+|++|+|||||++++ .+.+++. +++|
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            467778899999999999996 568999999988633  4455678999999999999999999999 4555554 8999


Q ss_pred             EEecCCCCHhHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC-CeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          226 YELMENRSLDIQLHG-PSHGSALTWHMRMKIALDTARGLEYLHEHCNP-AVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      ||||+.|+|...+.. +.....+++..+|+++.|+++||..+|+.... .|+||||||.||+|+.+|.+||+||||++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999988765 23455689999999999999999999994321 3999999999999999999999999999988


Q ss_pred             CCCCccccccccccCccccccccCCcCcc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ........+.+|||.||+||.+.+..|+.
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~  207 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNF  207 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCc
Confidence            77766667789999999999999998863


No 12 
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=7.3e-36  Score=270.58  Aligned_cols=173  Identities=33%  Similarity=0.454  Sum_probs=148.3

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  224 (335)
                      .+.|+..++||+|.||.||+|+. .+|+.||+|++....  .....-..+||.+|++|+||||++|.+...+.  ..+||
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            45677788999999999999974 679999999996554  44456678999999999999999999998877  68999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      |+|||++ +|.-++.  ..+-.+++.++..++.|++.||+|+|++   +|+|||||.+|||||++|.+||+|||||+...
T Consensus       196 VFeYMdh-DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT  269 (560)
T ss_pred             EEecccc-hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence            9999985 6655554  3456799999999999999999999999   99999999999999999999999999998665


Q ss_pred             CCCc-cccccccccCccccccccCC
Q 019842          305 SQNK-NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       305 ~~~~-~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .... ..+..+-|++|.|||.+++.
T Consensus       270 ~~~~~~~T~rVvTLWYRpPELLLG~  294 (560)
T KOG0600|consen  270 PSGSAPYTSRVVTLWYRPPELLLGA  294 (560)
T ss_pred             CCCCcccccceEEeeccChHHhcCC
Confidence            4432 34455689999999999987


No 13 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-35  Score=253.20  Aligned_cols=174  Identities=29%  Similarity=0.380  Sum_probs=155.6

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      .++|+..+.||.|+||+|..++.+ +|..+|+|+++...   ....+...+|..+|+.+.||+++++++.+.+.+.+|||
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            357888999999999999999875 57889999997543   33445688999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++|.|..+|+   +...+++..+..+|.||+.||+|||+.   +|++|||||+|||||.+|.+||+|||+|+....
T Consensus       123 meyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  123 MEYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             EeccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            99999999999995   446799999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCccccccccccCccccccccCCcCcc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .   +.+.|||+.|+|||.+....|++
T Consensus       197 r---T~TlCGTPeYLAPEii~sk~ynk  220 (355)
T KOG0616|consen  197 R---TWTLCGTPEYLAPEIIQSKGYNK  220 (355)
T ss_pred             c---EEEecCCccccChHHhhcCCCCc
Confidence            3   34679999999999999998875


No 14 
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00  E-value=4.6e-36  Score=283.39  Aligned_cols=177  Identities=28%  Similarity=0.450  Sum_probs=153.2

Q ss_pred             cCCcccceeeecccEEEEEEEeCC----CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD----NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ....+.++||.|.||.|++|+++-    ...||||.++... +....+|+.|+.+|.+++||||++|.|+.......++|
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence            445678999999999999998852    4679999998664 44567899999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      .|||+||+|+.+|+.  +...+++.+..-++++||.||+||.+.   ++|||||.++|||++.|..+|++||||++...+
T Consensus       709 TEyMENGsLDsFLR~--~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvled  783 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  783 (996)
T ss_pred             hhhhhCCcHHHHHhh--cCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeeccc
Confidence            999999999999974  446699999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCccc-ccc--ccccCccccccccCCcCcc
Q 019842          306 QNKNN-LKL--SGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ~~~~~-~~~--~gt~~y~aPE~l~~~~~~~  332 (335)
                      ..... ...  .-..+|.|||.+.-+++|.
T Consensus       784 d~~~~ytt~GGKIPiRWTAPEAIa~RKFTs  813 (996)
T KOG0196|consen  784 DPEAAYTTLGGKIPIRWTAPEAIAYRKFTS  813 (996)
T ss_pred             CCCccccccCCccceeecChhHhhhcccCc
Confidence            43221 111  2257999999999988864


No 15 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00  E-value=2.5e-36  Score=258.12  Aligned_cols=174  Identities=25%  Similarity=0.362  Sum_probs=150.1

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .|+...++|+|+||.||+++.+ +|+.||||++....  +...+-.++|+.+|++++|+|+|.|+.+|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4666778999999999999876 59999999995442  33345578999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      |+..-|.+.-+   ....++.+...+++.|+++|+.|+|++   +++||||||+||||+.++.+||||||+|+.......
T Consensus        83 ~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd  156 (396)
T KOG0593|consen   83 CDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD  156 (396)
T ss_pred             cchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence            99766665542   344588999999999999999999999   999999999999999999999999999988775555


Q ss_pred             cccccccccCccccccccC-CcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLD-GMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~-~~~~  331 (335)
                      ..+....|.+|.|||.+.+ -+|+
T Consensus       157 ~YTDYVATRWYRaPELLvGDtqYG  180 (396)
T KOG0593|consen  157 NYTDYVATRWYRAPELLVGDTQYG  180 (396)
T ss_pred             hhhhhhhhhhccChhhhcccCcCC
Confidence            5566788999999999988 5554


No 16 
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00  E-value=1.9e-35  Score=271.55  Aligned_cols=182  Identities=30%  Similarity=0.441  Sum_probs=155.9

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      |-+.+...+.+.||+|.||.|..+..+.+..||||+++... ....++|.+|+.+|.+++||||++|+|+|..++.+++|
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            33455566788999999999999999989999999997654 44568999999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +|||++|+|..++..... ..+......+|+.|||.||+||.+.   ++|||||.++|||+|.++++||+|||+++....
T Consensus       614 ~EYmEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys  689 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS  689 (807)
T ss_pred             HHHHhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence            999999999999974221 2245667788999999999999998   999999999999999999999999999986654


Q ss_pred             CCcccc--ccccccCccccccccCCcCcc
Q 019842          306 QNKNNL--KLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ~~~~~~--~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ......  ...-..+|||||.+..|++|+
T Consensus       690 g~yy~vqgr~vlpiRwmawEsillgkFtt  718 (807)
T KOG1094|consen  690 GDYYRVQGRAVLPIRWMAWESILLGKFTT  718 (807)
T ss_pred             CCceeeecceeeeeeehhHHHHHhccccc
Confidence            444322  334578999999999999875


No 17 
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2e-35  Score=264.06  Aligned_cols=186  Identities=30%  Similarity=0.441  Sum_probs=147.3

Q ss_pred             ecCCCccccccHHHHHHHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhc--CCCCce
Q 019842          132 SKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSN--IHHPNV  209 (335)
Q Consensus       132 ~~~~~~~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~ni  209 (335)
                      ++.|++.+.+-...   ...+....+.||+|.||.||+|++. |+.||||++...   +.+.+.+|.++.+.  |+|+||
T Consensus       195 SGSGSGlplLVQRT---iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENI  267 (513)
T KOG2052|consen  195 SGSGSGLPLLVQRT---IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENI  267 (513)
T ss_pred             CCCCCCchhHhHHh---hhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchh
Confidence            34444444433332   3456777899999999999999996 678999999643   33455666666654  599999


Q ss_pred             eEEeeEEEeCC----eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-----CCCCCeEecCCC
Q 019842          210 VCLLGYSAHDD----TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-----HCNPAVIHRDLK  280 (335)
Q Consensus       210 v~l~g~~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-----~~~~~ivHrdlk  280 (335)
                      +.+++....++    .+|||+||.++|+|+++|..    ..++....++++..+|.||++||.     +.+|.|.|||||
T Consensus       268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlK  343 (513)
T KOG2052|consen  268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLK  343 (513)
T ss_pred             hhhhhccccCCCceEEEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccc
Confidence            99999876554    68999999999999999963    569999999999999999999995     457899999999


Q ss_pred             CCCEEEcCCCcEEEEcccCceeCCCCC----ccccccccccCccccccccCC
Q 019842          281 SSNILLDSKFNAKLSDFGLAITDGSQN----KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       281 ~~Nill~~~~~~kl~Dfgla~~~~~~~----~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      +.|||+.+|+.+.|+|+|||.......    ......+||.+|||||++...
T Consensus       344 SKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdet  395 (513)
T KOG2052|consen  344 SKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDET  395 (513)
T ss_pred             cccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhh
Confidence            999999999999999999996543321    122234799999999998653


No 18 
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.7e-35  Score=273.28  Aligned_cols=183  Identities=33%  Similarity=0.488  Sum_probs=154.2

Q ss_pred             HHHHHHhcCCcccceeeecccEEEEEEEeCC--C--ce-EEEEEecc---cCchhHHHHHHHHHHHhcCCCCceeEEeeE
Q 019842          144 KLLEKATDSFHESNILGEGGFGCVYKAKLDD--N--LH-VAVKKLDC---ATQDAGREFENEVDLLSNIHHPNVVCLLGY  215 (335)
Q Consensus       144 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~  215 (335)
                      ..++...++....++||+|+||.||+|++..  +  .. ||||..+.   .......+|++|+++|++++|||||+++|+
T Consensus       150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV  229 (474)
T KOG0194|consen  150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV  229 (474)
T ss_pred             cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            4455556666677999999999999998653  2  23 89999874   346678899999999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 019842          216 SAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLS  295 (335)
Q Consensus       216 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~  295 (335)
                      +.....+|+|||+|+||+|.++|..  ....++..++++++.+.|+||+|||++   +++||||.++|||++.++.+||+
T Consensus       230 a~~~~Pl~ivmEl~~gGsL~~~L~k--~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKIS  304 (474)
T KOG0194|consen  230 AVLEEPLMLVMELCNGGSLDDYLKK--NKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKIS  304 (474)
T ss_pred             EcCCCccEEEEEecCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeC
Confidence            9999999999999999999999974  334699999999999999999999999   99999999999999999999999


Q ss_pred             cccCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          296 DFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       296 Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ||||++.............-..+|+|||.+..+.|+
T Consensus       305 DFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s  340 (474)
T KOG0194|consen  305 DFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFS  340 (474)
T ss_pred             ccccccCCcceeeccccccCcceecChhhhccCccc
Confidence            999986643211111111356799999999999875


No 19 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00  E-value=9.9e-35  Score=244.21  Aligned_cols=173  Identities=33%  Similarity=0.499  Sum_probs=152.3

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCch--hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQD--AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|...+.+|+|.||.||+|+. ++|+.||||+++.....  ......+|+..|+.++|+||+.|++++-+.+...+|+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            3567788999999999999975 57999999999755322  24567899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      ||+ .+|...+++  +...++..+...++.++++|++|||++   .|+||||||.|+|++++|.+||+|||+|+..+...
T Consensus        82 fm~-tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   82 FMP-TDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             ecc-ccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            997 689888864  456799999999999999999999999   99999999999999999999999999999988766


Q ss_pred             ccccccccccCccccccccCCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .......-|.+|.|||.+.+.+
T Consensus       156 ~~~~~~V~TRWYRAPELLfGsr  177 (318)
T KOG0659|consen  156 RIQTHQVVTRWYRAPELLFGSR  177 (318)
T ss_pred             cccccceeeeeccChHHhccch
Confidence            6555557899999999998764


No 20 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=6.3e-34  Score=253.14  Aligned_cols=175  Identities=33%  Similarity=0.524  Sum_probs=148.6

Q ss_pred             CCcccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC--eEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD--TRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lv~E~  228 (335)
                      ++...+.||+|.||.||++...+ |...|||.+...+....+.+.+|+.+|++++|||||+++|.....+  .+++.|||
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            45567899999999999998754 8899999997654334677999999999999999999999855444  69999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEcccCceeCCC--
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAITDGS--  305 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~~~~--  305 (335)
                      +++|+|.+++.+.  +..+++..+.+++.|+++||+|||++   +++||||||+|||++. ++.+||+|||+++....  
T Consensus        98 ~~~GsL~~~~~~~--g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   98 APGGSLSDLIKRY--GGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence            9999999999642  22799999999999999999999999   9999999999999999 79999999999976542  


Q ss_pred             -CCccccccccccCccccccccCCcCc
Q 019842          306 -QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 -~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       .........||+.|||||++.+|...
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~  199 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVA  199 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcC
Confidence             22223456899999999999976444


No 21 
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00  E-value=4.9e-35  Score=268.03  Aligned_cols=174  Identities=31%  Similarity=0.458  Sum_probs=157.6

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|...+.||+|.||.||||+.+ +.+.||+|.+...  .+.+.+.+.+|++++++++||||+.++++|+...++|+|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            46777889999999999999765 5789999998654  34456789999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+.+ +|..+|.   ....++++.+..++.++..||.|||++   +|+|||+||+|||++.++.+|++|||+|+......
T Consensus        82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9986 9999995   456799999999999999999999999   99999999999999999999999999999887776


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....+.||+-|||||.+.+++|+
T Consensus       155 ~vltsikGtPlYmAPElv~e~pyd  178 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQPYD  178 (808)
T ss_pred             eeeeeccCcccccCHHHHcCCCcc
Confidence            666778899999999999998885


No 22 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=7.6e-34  Score=261.69  Aligned_cols=177  Identities=29%  Similarity=0.382  Sum_probs=153.6

Q ss_pred             HhcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc----Cc-hhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA----TQ-DAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDT  221 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~  221 (335)
                      ....|...+.||+|.||+|+.|.. .++..||+|.++..    .. ...+.+.+|+.++++++ ||||++++.++...+.
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            456788899999999999999975 46899999977543    11 23456778999999998 9999999999999999


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcccCc
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDFGLA  300 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Dfgla  300 (335)
                      .++||||+.+|+|.+++..   ...+.+..+.+++.|+++|++|||++   +|+||||||+|+|++.+ +++||+|||++
T Consensus        95 ~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s  168 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS  168 (370)
T ss_pred             EEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence            9999999999999999963   56789999999999999999999999   99999999999999999 99999999999


Q ss_pred             eeCCCCCccccccccccCccccccccCCc-Cc
Q 019842          301 ITDGSQNKNNLKLSGTLGYVAPEYLLDGM-VG  331 (335)
Q Consensus       301 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~  331 (335)
                      .............+||+.|+|||++.+.. |+
T Consensus       169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~  200 (370)
T KOG0583|consen  169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYS  200 (370)
T ss_pred             cccCCCCCcccCCCCCcccCCHHHhCCCCCcC
Confidence            77632233344569999999999999977 65


No 23 
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=6.9e-35  Score=257.88  Aligned_cols=175  Identities=24%  Similarity=0.353  Sum_probs=156.0

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ..+|++.+.||+|.||+|-+|.. ..|+.||||.++..   ++++.-.+++||++|+.|+||||+.++.+|+..+...+|
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            35677888999999999999964 67999999998654   445556789999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||..+|.|++++.   ....|++.++..+++||.+|+.|+|.+   +++|||||.+|||||.|+++||+|||++.....
T Consensus       132 MEYaS~GeLYDYiS---er~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  132 MEYASGGELYDYIS---ERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EEecCCccHHHHHH---HhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence            99999999999995   456799999999999999999999999   999999999999999999999999999966544


Q ss_pred             CCccccccccccCccccccccCCcCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ... -.++||++-|.+||.+.+.+|.
T Consensus       206 ~kf-LqTFCGSPLYASPEIvNG~PY~  230 (668)
T KOG0611|consen  206 KKF-LQTFCGSPLYASPEIVNGTPYK  230 (668)
T ss_pred             ccH-HHHhcCCcccCCccccCCCCCC
Confidence            333 3468999999999999998884


No 24 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.3e-34  Score=264.51  Aligned_cols=175  Identities=30%  Similarity=0.476  Sum_probs=158.0

Q ss_pred             cCCcccceeeecccEEEEEEE-eCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      ..|..-..||+|+.|.||.|. ..+++.||||++....+...+-+.+|+.+|+..+|+|||+++..+..++.+|+|||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            457777899999999999996 4578899999998777777777999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++|+|.+.+.    ...+++.++..|++++++||+|||.+   +|+|||||.+|||++.++.+||+|||++.........
T Consensus       353 ~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K  425 (550)
T KOG0578|consen  353 EGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK  425 (550)
T ss_pred             CCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence            9999988874    34599999999999999999999999   9999999999999999999999999999777666656


Q ss_pred             ccccccccCccccccccCCcCcc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .....||+.|||||++....|+.
T Consensus       426 R~TmVGTPYWMAPEVvtrk~YG~  448 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKPYGP  448 (550)
T ss_pred             cccccCCCCccchhhhhhcccCc
Confidence            66778999999999999988864


No 25 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00  E-value=3.7e-34  Score=261.48  Aligned_cols=178  Identities=30%  Similarity=0.406  Sum_probs=154.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  223 (335)
                      ..++|...+.||+|+|++|++|+. ++++++|||++...   .+...+-+..|-++|.+| .||.|++|+-.|+++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            346889999999999999999975 46899999998644   233345577899999999 8999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +|+||+++|+|.++++   +-+.+++.....++.+|+.||+|||++   |||||||||+|||||+|+.+||+|||-|+.+
T Consensus       151 FvLe~A~nGdll~~i~---K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIK---KYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEecCCCcHHHHHH---HhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence            9999999999999995   346799999999999999999999999   9999999999999999999999999999654


Q ss_pred             CCCC-----------cc--ccccccccCccccccccCCcCcc
Q 019842          304 GSQN-----------KN--NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       304 ~~~~-----------~~--~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ....           ..  ..+++||..|++||++.++..+.
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~  266 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGP  266 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCc
Confidence            3211           11  14588999999999999998764


No 26 
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.2e-34  Score=240.32  Aligned_cols=179  Identities=29%  Similarity=0.441  Sum_probs=156.8

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..++|+..+.||+|.||.||.|+.+ ++-.||+|++...   ..+..+++.+|+++-+.|+||||+++++++.+....||
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            3568899999999999999999865 5778999998543   23345679999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ++||.++|+++..|... ....+++.....+..|+|.||.|+|..   +++||||||+|+|++.++..||+|||.+....
T Consensus       100 ilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            99999999999999753 345689999999999999999999999   99999999999999999999999999997654


Q ss_pred             CCCccccccccccCccccccccCCcCccc
Q 019842          305 SQNKNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       305 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                        .......+||..|.+||+..+..++.+
T Consensus       176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~  202 (281)
T KOG0580|consen  176 --SNKRKTLCGTLDYLPPEMVEGRGHDKF  202 (281)
T ss_pred             --CCCceeeecccccCCHhhcCCCCccch
Confidence              333446799999999999999887653


No 27 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00  E-value=1.7e-33  Score=260.17  Aligned_cols=182  Identities=31%  Similarity=0.492  Sum_probs=155.2

Q ss_pred             HHHHHHhcCCcccceeeecccEEEEEEEeCCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCe
Q 019842          144 KLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDT  221 (335)
Q Consensus       144 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  221 (335)
                      ++++...+++...+.||+|.||+||+|++.+  .||||.++..  +.+..+.|++|+..+++-+|.||+-+.|+|..+..
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            5667777777889999999999999999975  4999999765  34466789999999999999999999999999877


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                       .+|+.+|++.+|+.++|..+  ..++....+.||.|||+||.|||.+   +|||||||..||+|.+++++||+|||++.
T Consensus       463 -AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLAT  536 (678)
T ss_pred             -eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccccee
Confidence             99999999999999999643  6799999999999999999999999   99999999999999999999999999984


Q ss_pred             eCCC--CCccccccccccCccccccccCCcCccc
Q 019842          302 TDGS--QNKNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       302 ~~~~--~~~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      .-..  .........|...|||||++..+.-..|
T Consensus       537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPf  570 (678)
T KOG0193|consen  537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPF  570 (678)
T ss_pred             eeeeeccccccCCCccchhhhcHHHHhhcccCCC
Confidence            3221  1111223357889999999987765555


No 28 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.8e-34  Score=259.78  Aligned_cols=173  Identities=31%  Similarity=0.398  Sum_probs=149.5

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchh-HHHHHHHHHHHhcCC-CCceeEEeeEEEeCC-eEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDA-GREFENEVDLLSNIH-HPNVVCLLGYSAHDD-TRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lv  225 (335)
                      .++|...+.||.|.||.||+|+. +++..||||+++...... .-.-.+|+..|++|+ ||||++|.+++.+.+ .+|+|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            45778888999999999999975 568899999997543322 223468999999998 999999999999988 99999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||||+ .+|+..+.++  +..+++..+..|+.||++||+|+|.+   |+.|||+||+|||+..+..+||+|||+||....
T Consensus        89 fE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S  162 (538)
T KOG0661|consen   89 FEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS  162 (538)
T ss_pred             HHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence            99997 6899988764  67899999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCccccccccccCccccccccCCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .... +..+.|.+|.|||++...-
T Consensus       163 kpPY-TeYVSTRWYRAPEvLLrs~  185 (538)
T KOG0661|consen  163 KPPY-TEYVSTRWYRAPEVLLRSG  185 (538)
T ss_pred             CCCc-chhhhcccccchHHhhhcc
Confidence            5444 3457899999999997653


No 29 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00  E-value=1.2e-33  Score=244.64  Aligned_cols=173  Identities=34%  Similarity=0.445  Sum_probs=149.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCch--hHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQD--AGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  225 (335)
                      ++|+..+.|++|.||.||+|+.+ +++.||+|+++.....  ---.-.+||.+|.+.+|||||.+-.+....  +..|+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            45667889999999999999875 6789999999654321  123467999999999999999998887654  579999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||||+ -+|...+..  ...++...+...++.|+++|++|||.+   -|+|||||++|+|+++.|.+||+|||+|+..+.
T Consensus       156 Me~~E-hDLksl~d~--m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs  229 (419)
T KOG0663|consen  156 MEYVE-HDLKSLMET--MKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGS  229 (419)
T ss_pred             HHHHH-hhHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcC
Confidence            99997 588888874  346799999999999999999999999   899999999999999999999999999999988


Q ss_pred             CCccccccccccCccccccccCCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .....+...-|.+|.|||.+.+.+
T Consensus       230 p~k~~T~lVVTLWYRaPELLLG~~  253 (419)
T KOG0663|consen  230 PLKPYTPLVVTLWYRAPELLLGAK  253 (419)
T ss_pred             CcccCcceEEEeeecCHHHhcCCc
Confidence            877777888999999999998764


No 30 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.7e-33  Score=261.49  Aligned_cols=178  Identities=29%  Similarity=0.414  Sum_probs=157.2

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  223 (335)
                      ..++|...++||+|.||+|+++..+ +++.+|||.++..   ..++.+..+.|.+++... +||.+++|+++++..+.+|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            4578999999999999999999876 5788999999754   345566788888888777 5999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +||||+.||++..+.    +...+++..+..++..|+.||+|||++   +|||||||.+|||||.+|.+||+||||++..
T Consensus       446 fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~  518 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG  518 (694)
T ss_pred             EEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc
Confidence            999999999954433    345799999999999999999999999   9999999999999999999999999999876


Q ss_pred             CCCCccccccccccCccccccccCCcCccc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      ......+.+++||+.|||||++.++.||++
T Consensus       519 m~~g~~TsTfCGTpey~aPEil~e~~Yt~a  548 (694)
T KOG0694|consen  519 MGQGDRTSTFCGTPEFLAPEVLTEQSYTRA  548 (694)
T ss_pred             CCCCCccccccCChhhcChhhhccCcccch
Confidence            655667778999999999999999999875


No 31 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00  E-value=5.7e-33  Score=253.68  Aligned_cols=146  Identities=29%  Similarity=0.400  Sum_probs=134.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..++|+..++||+|+||.||.|+- ++|..+|+|+++...   ......++.|..+|...++++||+|+-.|++.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            467899999999999999999965 569999999997553   4456778999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ||||++||++..+|.   +...|++..+..++.+++.|++-||+.   |+|||||||+|+|||..|.+||+||||+
T Consensus       219 iMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs  288 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLS  288 (550)
T ss_pred             EEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecccccc
Confidence            999999999999995   456799999999999999999999999   9999999999999999999999999998


No 32 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00  E-value=5.3e-33  Score=243.74  Aligned_cols=174  Identities=31%  Similarity=0.467  Sum_probs=146.2

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCch--hHHHHHHHHHHHhcCCCCc-eeEEeeEEEeCC------e
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQD--AGREFENEVDLLSNIHHPN-VVCLLGYSAHDD------T  221 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~------~  221 (335)
                      .|+..+.||+|.||+||+|+.. +|+.||+|++....++  .-....+|+.++++++|+| |++|++++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            4455667999999999999764 6889999999765442  3355789999999999999 999999999887      7


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          222 RFIVYELMENRSLDIQLHGPSHG-SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      .++|+||++ .+|..++...... ..++...+..++.|+++||+|||++   +|+||||||.||||+++|.+||+|||+|
T Consensus        92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchH
Confidence            899999996 6888888653221 4577789999999999999999999   9999999999999999999999999999


Q ss_pred             eeCCCCCccccccccccCccccccccCCc
Q 019842          301 ITDGSQNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       301 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +...-.....+.-.+|.+|.|||++.+..
T Consensus       168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~  196 (323)
T KOG0594|consen  168 RAFSIPMRTYTPEVVTLWYRAPEVLLGST  196 (323)
T ss_pred             HHhcCCcccccccEEEeeccCHHHhcCCC
Confidence            86653333344557899999999999883


No 33 
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.1e-33  Score=279.99  Aligned_cols=180  Identities=32%  Similarity=0.485  Sum_probs=153.2

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC--C----ceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD--N----LHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      ..+.+..+.||+|.||.||+|...+  +    ..||+|.+... +.+...+|.+|..+|++++|||||+++|+|.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3445567889999999999998653  3    34899999765 566778999999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          223 FIVYELMENRSLDIQLHGPS----HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                      ++++|||++|+|..+|+..+    ....++..+.+.++.|||+|+.||+++   ++|||||.++||||++...+||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence            99999999999999998632    245699999999999999999999999   99999999999999999999999999


Q ss_pred             CceeCCCCCccccccc--cccCccccccccCCcCcc
Q 019842          299 LAITDGSQNKNNLKLS--GTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       299 la~~~~~~~~~~~~~~--gt~~y~aPE~l~~~~~~~  332 (335)
                      ||+.............  -...|||||.++++.||+
T Consensus       848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFts  883 (1025)
T KOG1095|consen  848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTS  883 (1025)
T ss_pred             hhHhhhhchheeccCccccceecCCHHHHhhccccc
Confidence            9986544443332222  346899999999999864


No 34 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00  E-value=7e-33  Score=249.46  Aligned_cols=175  Identities=29%  Similarity=0.397  Sum_probs=144.5

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--------------hhHHHHHHHHHHHhcCCCCceeEEe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--------------DAGREFENEVDLLSNIHHPNVVCLL  213 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~  213 (335)
                      ..++|...+.||+|.||.|-+|... +++.||+|.+.....              ...+...+||.+|++++|||||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            3578888999999999999999864 689999999853211              1234788999999999999999999


Q ss_pred             eEEEeC--CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc
Q 019842          214 GYSAHD--DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN  291 (335)
Q Consensus       214 g~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~  291 (335)
                      .+..+.  +.+|||+|||..|.+...-   .....+++.++.++++++..||+|||.+   +|+||||||+|+||+++|+
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~  248 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGT  248 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCc
Confidence            998765  5899999999999885431   2223399999999999999999999999   9999999999999999999


Q ss_pred             EEEEcccCceeCCCC-----CccccccccccCccccccccCCc
Q 019842          292 AKLSDFGLAITDGSQ-----NKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       292 ~kl~Dfgla~~~~~~-----~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +||+|||.+......     ...-....||+.|+|||...++.
T Consensus       249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~  291 (576)
T KOG0585|consen  249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGN  291 (576)
T ss_pred             EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCC
Confidence            999999998655221     12222357999999999998854


No 35 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00  E-value=3.3e-32  Score=248.86  Aligned_cols=169  Identities=28%  Similarity=0.341  Sum_probs=145.7

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      +.||+|+||.||+++.. +++.||+|.++..   .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999864 6889999998643   2334456889999999999999999999999999999999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccc
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLK  312 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  312 (335)
                      +|.+++..   ...+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++...........
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~  154 (323)
T cd05571          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT  154 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence            99988853   35689999999999999999999999   9999999999999999999999999998754333333334


Q ss_pred             cccccCccccccccCCcCc
Q 019842          313 LSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       313 ~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..||+.|+|||++.+..++
T Consensus       155 ~~gt~~y~aPE~~~~~~~~  173 (323)
T cd05571         155 FCGTPEYLAPEVLEDNDYG  173 (323)
T ss_pred             eecCccccChhhhcCCCCC
Confidence            5799999999999887664


No 36 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00  E-value=3.6e-32  Score=252.59  Aligned_cols=175  Identities=26%  Similarity=0.339  Sum_probs=149.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||+||+|... +++.||+|++....   ......+.+|++++.+++|+||+++++.+.+.+..|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47888999999999999999765 58899999986432   233456889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+++.....
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~  154 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA  154 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence            99999999999853   35689999999999999999999999   9999999999999999999999999998643211


Q ss_pred             Cc-----------------------------------cccccccccCccccccccCCcCc
Q 019842          307 NK-----------------------------------NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~-----------------------------------~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..                                   .....+||+.|+|||++.++.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~  214 (363)
T cd05628         155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN  214 (363)
T ss_pred             ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCC
Confidence            00                                   01234699999999999887665


No 37 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=3.3e-32  Score=243.58  Aligned_cols=177  Identities=28%  Similarity=0.380  Sum_probs=150.6

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .++|+..+.||.|..++||+|+. ..+..||||++....- ...+.+++|+..|+.++||||++++..|..+..+|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            45788899999999999999975 4679999999976543 335889999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      ||.+|++.+.+...- ...+++..+..|++++++||.|||++   |.||||||+.||||+++|.+||+|||.+.......
T Consensus       105 fMa~GS~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYY-PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             hhcCCcHHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            999999999887532 33499999999999999999999999   99999999999999999999999999874432222


Q ss_pred             cc---c-cccccccCccccccccCCcC
Q 019842          308 KN---N-LKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       308 ~~---~-~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ..   . ..+.||+.|||||+++....
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~  207 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLH  207 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhccc
Confidence            11   1 34579999999999654443


No 38 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00  E-value=5.5e-32  Score=247.46  Aligned_cols=169  Identities=29%  Similarity=0.352  Sum_probs=145.1

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      +.||+|+||.||+++.. +|..||+|.+...   .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999864 6889999998643   2334556788999999999999999999999999999999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccc
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLK  312 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  312 (335)
                      +|..++..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||++............
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  154 (323)
T cd05595          81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT  154 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence            99888853   34689999999999999999999999   9999999999999999999999999998654333333334


Q ss_pred             cccccCccccccccCCcCc
Q 019842          313 LSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       313 ~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..|++.|+|||++.++.++
T Consensus       155 ~~gt~~y~aPE~~~~~~~~  173 (323)
T cd05595         155 FCGTPEYLAPEVLEDNDYG  173 (323)
T ss_pred             ccCCcCcCCcccccCCCCC
Confidence            5799999999999887664


No 39 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00  E-value=8.4e-32  Score=246.74  Aligned_cols=170  Identities=27%  Similarity=0.353  Sum_probs=145.9

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      +.||+|+||.||+++.. +++.||+|.+...   .......+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999864 6889999998643   2344567889999999999999999999999999999999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccc
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLK  312 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  312 (335)
                      +|..++..   ...+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+++...........
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~  154 (328)
T cd05593          81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT  154 (328)
T ss_pred             CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence            99888853   34689999999999999999999999   9999999999999999999999999998754332233334


Q ss_pred             cccccCccccccccCCcCcc
Q 019842          313 LSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       313 ~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ..||+.|+|||++.++.++.
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~  174 (328)
T cd05593         155 FCGTPEYLAPEVLEDNDYGR  174 (328)
T ss_pred             ccCCcCccChhhhcCCCCCc
Confidence            57999999999998776643


No 40 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.98  E-value=3.8e-32  Score=249.88  Aligned_cols=181  Identities=30%  Similarity=0.411  Sum_probs=146.9

Q ss_pred             HhcCCcccceeeecccEEEEEEEe------CCCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCC
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL------DDNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDD  220 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  220 (335)
                      ..++|+..+.||+|+||.||+|..      .++..||+|++.... ......+.+|+.++.++ +||||++++++|...+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            456788899999999999999974      235689999986443 33456799999999999 8999999999987654


Q ss_pred             -eEEEEEEecCCCCHhHHhcCCCC--------------------------------------------------------
Q 019842          221 -TRFIVYELMENRSLDIQLHGPSH--------------------------------------------------------  243 (335)
Q Consensus       221 -~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------------------  243 (335)
                       ..++||||+++|+|.+++.....                                                        
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence             68999999999999988864211                                                        


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--cccccccccC
Q 019842          244 ---GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLG  318 (335)
Q Consensus       244 ---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~  318 (335)
                         ...+++..+..++.|+++||+|||+.   +++||||||+|||+++++.+||+|||+++.......  ......++..
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence               13588899999999999999999999   999999999999999999999999999975432211  1122345678


Q ss_pred             ccccccccCCcCcc
Q 019842          319 YVAPEYLLDGMVGK  332 (335)
Q Consensus       319 y~aPE~l~~~~~~~  332 (335)
                      |+|||++.++.+++
T Consensus       242 y~aPE~~~~~~~~~  255 (338)
T cd05102         242 WMAPESIFDKVYTT  255 (338)
T ss_pred             ccCcHHhhcCCCCc
Confidence            99999998877653


No 41 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.98  E-value=1.5e-31  Score=244.79  Aligned_cols=169  Identities=28%  Similarity=0.343  Sum_probs=144.5

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      +.||+|+||.||++... ++..||+|.+...   ......++.+|++++..++||||+++++++.+.+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999864 6889999998643   2334466788999999999999999999999999999999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      +|..++..   ...+++..+..++.|++.||+|||+ .   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  154 (325)
T cd05594          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK  154 (325)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence            99988853   3468999999999999999999997 6   999999999999999999999999999875433333333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||+.|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05594         155 TFCGTPEYLAPEVLEDNDYG  174 (325)
T ss_pred             cccCCcccCCHHHHccCCCC
Confidence            45699999999999887664


No 42 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.98  E-value=5.6e-32  Score=251.35  Aligned_cols=175  Identities=27%  Similarity=0.366  Sum_probs=148.8

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|+.. +++.||+|++...   .......+.+|++++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47888999999999999999875 5889999999643   2234456889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++......
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  154 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS  154 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence            99999999999853   34689999999999999999999999   9999999999999999999999999998543211


Q ss_pred             Cc--------------------------------------cccccccccCccccccccCCcCc
Q 019842          307 NK--------------------------------------NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~--------------------------------------~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..                                      ......||+.|+|||++.++.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  217 (364)
T cd05599         155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYN  217 (364)
T ss_pred             ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCC
Confidence            00                                      00123589999999999887664


No 43 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.98  E-value=8.6e-32  Score=251.29  Aligned_cols=145  Identities=27%  Similarity=0.366  Sum_probs=130.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|...+.||+|+||.||++... +++.||+|++...   .......+.+|++++++++||||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            46888999999999999999764 6889999998543   2334567889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999998853   35688999999999999999999999   99999999999999999999999999985


No 44 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.98  E-value=6e-32  Score=247.79  Aligned_cols=172  Identities=27%  Similarity=0.396  Sum_probs=150.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|+.. +++.||+|.+...   .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            57888999999999999999875 5789999998643   2234467899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++.....
T Consensus        98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263         98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence            99999999998853   34688999999999999999999999   9999999999999999999999999999765432


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .   ....|++.|+|||++.+..++
T Consensus       172 ~---~~~~gt~~y~aPE~~~~~~~~  193 (329)
T PTZ00263        172 T---FTLCGTPEYLAPEVIQSKGHG  193 (329)
T ss_pred             c---ceecCChhhcCHHHHcCCCCC
Confidence            2   234789999999999887664


No 45 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.98  E-value=6.2e-32  Score=248.68  Aligned_cols=173  Identities=29%  Similarity=0.385  Sum_probs=149.0

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC--CceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD--NLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .++|+..+.||+|+||.||+|...+  +..||+|++...   .......+.+|+++++.++||||+++++++.+.+..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3578889999999999999997543  368999998543   23345678899999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++....
T Consensus       109 v~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            9999999999999853   34689999999999999999999999   99999999999999999999999999997654


Q ss_pred             CCCccccccccccCccccccccCCcCc
Q 019842          305 SQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...   ....||+.|+|||++.+..++
T Consensus       183 ~~~---~~~~gt~~y~aPE~~~~~~~~  206 (340)
T PTZ00426        183 TRT---YTLCGTPEYIAPEILLNVGHG  206 (340)
T ss_pred             CCc---ceecCChhhcCHHHHhCCCCC
Confidence            322   245799999999999876654


No 46 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.98  E-value=1.8e-31  Score=239.69  Aligned_cols=175  Identities=27%  Similarity=0.369  Sum_probs=148.4

Q ss_pred             CcccceeeecccEEEEEEEe-CCCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          153 FHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      |+..+.||+|+||.||+|.. .+++.||+|.+....   ......+.+|++++++++|+||+++++++.+++..++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            66778999999999999986 478999999986432   22334678999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++|+|..++... ....+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++........
T Consensus        82 ~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05631          82 MNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET  157 (285)
T ss_pred             cCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence            9999998877532 234689999999999999999999999   999999999999999999999999999976533222


Q ss_pred             cccccccccCccccccccCCcCcc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                       .....|+..|+|||++.++.++.
T Consensus       158 -~~~~~g~~~y~aPE~~~~~~~~~  180 (285)
T cd05631         158 -VRGRVGTVGYMAPEVINNEKYTF  180 (285)
T ss_pred             -ecCCCCCCCccCHhhhcCCCCCc
Confidence             22346899999999998877653


No 47 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.98  E-value=1e-31  Score=246.59  Aligned_cols=172  Identities=27%  Similarity=0.342  Sum_probs=150.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|+.. +++.||+|++...   .......+.+|++++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36888999999999999999876 5889999998643   2234567889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||.|||+.   +++||||||+|||+++++.+||+|||++..... 
T Consensus        81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-  153 (333)
T cd05600          81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-  153 (333)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence            99999999999853   34689999999999999999999999   999999999999999999999999999966543 


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ......|++.|+|||++.+..++
T Consensus       154 --~~~~~~gt~~y~aPE~~~~~~~~  176 (333)
T cd05600         154 --YANSVVGSPDYMAPEVLRGKGYD  176 (333)
T ss_pred             --ccCCcccCccccChhHhcCCCCC
Confidence              22234689999999999887654


No 48 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.98  E-value=4.9e-32  Score=244.14  Aligned_cols=172  Identities=26%  Similarity=0.369  Sum_probs=149.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|... +++.||+|.+....   ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46888999999999999999875 68899999986432   233456889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|+++||+|||++   +++||||||+|||+++++.+||+|||+++.....
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~  154 (291)
T cd05612          81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR  154 (291)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence            99999999999853   34689999999999999999999999   9999999999999999999999999998665332


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .   ....|++.|+|||++.+..++
T Consensus       155 ~---~~~~gt~~y~aPE~~~~~~~~  176 (291)
T cd05612         155 T---WTLCGTPEYLAPEVIQSKGHN  176 (291)
T ss_pred             c---ccccCChhhcCHHHHcCCCCC
Confidence            2   234689999999999877654


No 49 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.98  E-value=1.3e-31  Score=243.71  Aligned_cols=168  Identities=27%  Similarity=0.335  Sum_probs=144.7

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||.||+|+.. +++.||+|.+...   .......+.+|++++.+++||||+++++++.+.+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999875 5788999998643   233456788999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .+++..   ...+++..+..++.|+++||+|||+.   +++||||||+|||+++++.+||+|||+++.............
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  154 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC  154 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence            998853   34689999999999999999999999   999999999999999999999999999975433333333457


Q ss_pred             cccCccccccccCCcCcc
Q 019842          315 GTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~~~  332 (335)
                      ||+.|+|||++.+..++.
T Consensus       155 gt~~y~aPE~~~~~~~~~  172 (312)
T cd05585         155 GTPEYLAPELLLGHGYTK  172 (312)
T ss_pred             CCcccCCHHHHcCCCCCC
Confidence            999999999998876653


No 50 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.98  E-value=1.9e-31  Score=241.67  Aligned_cols=179  Identities=29%  Similarity=0.425  Sum_probs=147.5

Q ss_pred             cCCcccceeeecccEEEEEEEeCC-----------------CceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD-----------------NLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCL  212 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l  212 (335)
                      ++|...+.||+|+||.||++.+++                 +..||+|.+... ......++.+|++++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            577888999999999999997532                 346999998654 33445679999999999999999999


Q ss_pred             eeEEEeCCeEEEEEEecCCCCHhHHhcCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEe
Q 019842          213 LGYSAHDDTRFIVYELMENRSLDIQLHGPS----------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIH  276 (335)
Q Consensus       213 ~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH  276 (335)
                      ++++.+.+..++||||+++|+|.+++....                ....+++..+++++.|++.||+|||+.   +++|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence            999999999999999999999998875321                123578899999999999999999999   9999


Q ss_pred             cCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCcc
Q 019842          277 RDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       277 rdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      |||||+|||+++++.+||+|||+++.......  ......++..|+|||++.++.+++
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  219 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTT  219 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCc
Confidence            99999999999999999999999965433221  111234578899999998877653


No 51 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.98  E-value=1.6e-31  Score=249.82  Aligned_cols=144  Identities=26%  Similarity=0.295  Sum_probs=129.3

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .|...+.||+|+||+||+|+.. +++.||+|++...   .......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5778899999999999999764 5789999998643   23345678999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      |+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626          82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence            9999999999853   34688999999999999999999999   99999999999999999999999999974


No 52 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98  E-value=2.9e-32  Score=254.15  Aligned_cols=173  Identities=27%  Similarity=0.368  Sum_probs=151.9

Q ss_pred             CCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      -|+.++.||.|+.|.|..|++ .+|+.+|||.+...   .......+.+|+-+|+-+.|||++++++++++...+|+|.|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            355678999999999999986 57999999999654   23345668999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++|.|++++.   ..+++++.++.+++.||+.|+.|+|..   +|+||||||+|+|||.++++||+|||||.......
T Consensus        93 yv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk  166 (786)
T KOG0588|consen   93 YVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK  166 (786)
T ss_pred             ecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence            999999999995   456799999999999999999999999   99999999999999999999999999996544333


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .- .+-||++-|.|||++++.+|.
T Consensus       167 lL-eTSCGSPHYA~PEIV~G~pYd  189 (786)
T KOG0588|consen  167 LL-ETSCGSPHYAAPEIVSGRPYD  189 (786)
T ss_pred             cc-cccCCCcccCCchhhcCCCCC
Confidence            22 244899999999999999884


No 53 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98  E-value=2.2e-31  Score=248.40  Aligned_cols=145  Identities=26%  Similarity=0.324  Sum_probs=129.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|+.. +++.||+|.+....   ......+.+|++++++++|+||+++++.+.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36888999999999999999864 58899999985432   233456889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+|.
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            99999999999853   34688999999999999999999999   99999999999999999999999999974


No 54 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97  E-value=1.9e-31  Score=249.37  Aligned_cols=144  Identities=26%  Similarity=0.313  Sum_probs=129.2

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      +|...+.||+|+||.||+|+.. +++.||+|.+....   ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5778899999999999999864 67889999986432   3345678899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      |+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            9999999998853   34688999999999999999999999   99999999999999999999999999974


No 55 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97  E-value=2.9e-31  Score=242.65  Aligned_cols=169  Identities=29%  Similarity=0.440  Sum_probs=143.8

Q ss_pred             ceeeecccEEEEEEEe----CCCceEEEEEeccc----CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKL----DDNLHVAVKKLDCA----TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +.||+|+||.||+++.    .+++.||+|.++..    .......+.+|+++++.++||||+++++++.+++..|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999975    35789999998643    223345678999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++|+|.+++..   ...+.+..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++.......
T Consensus        82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (323)
T cd05584          82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT  155 (323)
T ss_pred             CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence            999999998853   34688899999999999999999999   999999999999999999999999999875433333


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......|++.|+|||++.+..++
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~  178 (323)
T cd05584         156 VTHTFCGTIEYMAPEILMRSGHG  178 (323)
T ss_pred             cccccCCCccccChhhccCCCCC
Confidence            33345789999999999876654


No 56 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.97  E-value=2.6e-31  Score=247.26  Aligned_cols=176  Identities=24%  Similarity=0.314  Sum_probs=149.4

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      ....++|+..+.||+|+||.||+++.. +++.+|+|.+...   .......+.+|+.+++.++||||+++++++.+++..
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            334578999999999999999999875 5788999998532   223345688999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++||||+++|+|.+++..    ..+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||++..
T Consensus       119 ~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~  191 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMK  191 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEeccccee
Confidence            999999999999998853    2488999999999999999999999   999999999999999999999999999976


Q ss_pred             CCCCCc-cccccccccCccccccccCCc
Q 019842          303 DGSQNK-NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       303 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ...... ......||+.|+|||++.+..
T Consensus       192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~  219 (370)
T cd05621         192 MDETGMVRCDTAVGTPDYISPEVLKSQG  219 (370)
T ss_pred             cccCCceecccCCCCcccCCHHHHhccC
Confidence            543222 222456999999999997643


No 57 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97  E-value=5.2e-31  Score=241.08  Aligned_cols=174  Identities=26%  Similarity=0.318  Sum_probs=147.2

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCC-CceeEEeeEEEeCCeEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHH-PNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~  226 (335)
                      +|+..+.||+|+||.||+|+.. +++.||+|.+...   .....+.+..|.+++..++| ++|+++++++.+.+..|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4778899999999999999875 4678999998643   23345678889999999976 46888999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||++......
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587          81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence            99999999988853   34689999999999999999999999   9999999999999999999999999998654332


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ........||..|+|||++.++.++
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~~~~  179 (324)
T cd05587         155 GKTTRTFCGTPDYIAPEIIAYQPYG  179 (324)
T ss_pred             CCceeeecCCccccChhhhcCCCCC
Confidence            3333345799999999999887765


No 58 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97  E-value=4.4e-31  Score=245.00  Aligned_cols=175  Identities=25%  Similarity=0.345  Sum_probs=148.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+++.. +++.||+|.+...   .......+.+|+.++.+++|+||+++++.+.+.+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46888999999999999999875 5889999998643   2334567889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||++.++.+||+|||++......
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~  154 (360)
T cd05627          81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA  154 (360)
T ss_pred             eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence            99999999999853   35689999999999999999999999   9999999999999999999999999998543211


Q ss_pred             C-----------------------------------ccccccccccCccccccccCCcCc
Q 019842          307 N-----------------------------------KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~-----------------------------------~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .                                   .......||+.|+|||++.+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  214 (360)
T cd05627         155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN  214 (360)
T ss_pred             cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCC
Confidence            0                                   001134689999999999887665


No 59 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97  E-value=2.3e-32  Score=239.75  Aligned_cols=169  Identities=29%  Similarity=0.434  Sum_probs=138.0

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TRFIV  225 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lv  225 (335)
                      .|...+++|.|.||.||+|.+. +++.||||+.-....    --.+|+++|++++|||||+|.-++....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            4667889999999999999875 468999999843322    2247999999999999999988876543     34589


Q ss_pred             EEecCCCCHhHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcccCceeC
Q 019842          226 YELMENRSLDIQLHG-PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDFGLAITD  303 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Dfgla~~~  303 (335)
                      ||||+ .+|...++. ...+..++...+.-+..|+.+||.|||+.   +|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus       101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            99998 578777753 12345688888899999999999999998   99999999999999986 99999999999887


Q ss_pred             CCCCccccccccccCccccccccCCc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ...... .+...|..|.|||.+.+..
T Consensus       177 ~~~epn-iSYicSRyYRaPELifga~  201 (364)
T KOG0658|consen  177 VKGEPN-ISYICSRYYRAPELIFGAT  201 (364)
T ss_pred             ccCCCc-eeEEEeccccCHHHHcCcc
Confidence            655544 4456789999999998863


No 60 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97  E-value=4.7e-31  Score=241.92  Aligned_cols=169  Identities=24%  Similarity=0.364  Sum_probs=144.6

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ++||+|+||.||+|+.. +++.||+|.++..   .....+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46999999999999875 5789999999643   223445688999999998 799999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~  154 (329)
T cd05588          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS  154 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence            999888753   35699999999999999999999999   999999999999999999999999999865332223333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||+.|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05588         155 TFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             cccCCccccCHHHHcCCCCC
Confidence            45799999999999887665


No 61 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97  E-value=5.7e-31  Score=236.82  Aligned_cols=172  Identities=30%  Similarity=0.468  Sum_probs=145.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|...+.||+|+||.||+|... ++..||+|.++... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            46888999999999999999865 68899999986443 22345678999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++ |+|.+++..  ....+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+++.......
T Consensus        85 ~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          85 LD-SDLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             CC-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            97 588888753  234588999999999999999999999   999999999999999999999999999976543333


Q ss_pred             cccccccccCccccccccCC
Q 019842          309 NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......+++.|+|||++.++
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~  178 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLGS  178 (288)
T ss_pred             cccCceecccccChHHhcCC
Confidence            22334689999999998753


No 62 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97  E-value=5.9e-31  Score=241.21  Aligned_cols=169  Identities=25%  Similarity=0.372  Sum_probs=143.9

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +++.||+|.+...   .......+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999875 5788999998643   233445678899988877 899999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||+|||++   +++||||||+||++++++.+||+|||+++..........
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~  154 (329)
T cd05618          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS  154 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence            999888743   35689999999999999999999999   999999999999999999999999999865433223333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||..|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05618         155 TFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             cccCCccccCHHHHcCCCCC
Confidence            45789999999999887765


No 63 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.97  E-value=3.1e-31  Score=244.87  Aligned_cols=175  Identities=26%  Similarity=0.350  Sum_probs=151.2

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|...+.||+|+||+||+|+.. +++.||+|++...   .......+.+|++++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46888999999999999999875 6889999998643   2244567899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++++|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++......
T Consensus        81 e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            99999999999864   25689999999999999999999998   9999999999999999999999999998654433


Q ss_pred             C-----------------------------ccccccccccCccccccccCCcCc
Q 019842          307 N-----------------------------KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~-----------------------------~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .                             .......||+.|+|||++.+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  208 (350)
T cd05573         155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYG  208 (350)
T ss_pred             CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCC
Confidence            2                             112234689999999999887664


No 64 
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97  E-value=2e-32  Score=251.06  Aligned_cols=167  Identities=31%  Similarity=0.498  Sum_probs=146.7

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      +...+.+-||.|+-|.||+|+++ ++.||||+++...       ..+|.-|++|+|+||+.+.|+|.....+++|||||.
T Consensus       124 e~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  124 EEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             HHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccc
Confidence            33344667999999999999996 5689999986432       356788999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      .|-|.+.|.   .+..++......+..+||.||.|||.+   .|||||||.-||||..+..+||+|||-++...+. ..+
T Consensus       196 ~GqL~~VLk---a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STk  268 (904)
T KOG4721|consen  196 QGQLYEVLK---AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STK  268 (904)
T ss_pred             cccHHHHHh---ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-hhh
Confidence            999999995   456789999999999999999999999   9999999999999999999999999998776554 344


Q ss_pred             cccccccCccccccccCCcCcc
Q 019842          311 LKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ..++||..|||||++.+.+.++
T Consensus       269 MSFaGTVaWMAPEvIrnePcsE  290 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNEPCSE  290 (904)
T ss_pred             hhhhhhHhhhCHHHhhcCCccc
Confidence            5789999999999999988764


No 65 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97  E-value=7.9e-31  Score=239.75  Aligned_cols=175  Identities=27%  Similarity=0.324  Sum_probs=147.4

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      +|...+.||+|+||.||+|+.. +++.||+|.+....   ......+..|..++..+ +|++|+++++++.+.+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999875 57799999986432   22344567788888877 5899999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|...+..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++.....
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616          81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence            99999999988853   34689999999999999999999999   9999999999999999999999999999754333


Q ss_pred             CccccccccccCccccccccCCcCcc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ........||+.|+|||++.++.++.
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05616         155 GVTTKTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             CCccccCCCChhhcCHHHhcCCCCCC
Confidence            33333457899999999998887653


No 66 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97  E-value=6.6e-31  Score=240.47  Aligned_cols=169  Identities=30%  Similarity=0.408  Sum_probs=141.7

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHH-HHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVD-LLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +|+.||+|.+...   ......++.+|.. +++.++||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999864 6889999998643   2233445566655 46778999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~  154 (325)
T cd05604          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT  154 (325)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence            999888853   45689999999999999999999999   999999999999999999999999999865433333334


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...|++.|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQPYD  174 (325)
T ss_pred             cccCChhhCCHHHHcCCCCC
Confidence            45799999999999887764


No 67 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97  E-value=6.1e-31  Score=239.94  Aligned_cols=169  Identities=29%  Similarity=0.379  Sum_probs=144.7

Q ss_pred             ceeeecccEEEEEEEe----CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          157 NILGEGGFGCVYKAKL----DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      +.||+|+||.||+++.    .+++.||+|++....  ......+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999865    357899999986432  2234567889999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +|+|.+++..   ...+++..+..++.|+++||+|||+.   +++||||||+|||+++++.+||+|||++..........
T Consensus        82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~  155 (318)
T cd05582          82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA  155 (318)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce
Confidence            9999998853   34689999999999999999999999   99999999999999999999999999987654433333


Q ss_pred             cccccccCccccccccCCcCc
Q 019842          311 LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....|++.|+|||.+.+..++
T Consensus       156 ~~~~g~~~y~aPE~~~~~~~~  176 (318)
T cd05582         156 YSFCGTVEYMAPEVVNRRGHT  176 (318)
T ss_pred             ecccCChhhcCHHHHcCCCCC
Confidence            345789999999999876554


No 68 
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97  E-value=9.4e-31  Score=240.11  Aligned_cols=172  Identities=23%  Similarity=0.311  Sum_probs=147.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+++.. +++.||+|.+...   .......+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47888999999999999999875 5788999998642   2223455888999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..  ....+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||++......
T Consensus        81 Ey~~gg~L~~~l~~--~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSK--FEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            99999999999863  234689999999999999999999999   9999999999999999999999999999765433


Q ss_pred             Cc-cccccccccCccccccccC
Q 019842          307 NK-NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       307 ~~-~~~~~~gt~~y~aPE~l~~  327 (335)
                      .. ......|++.|+|||++.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         156 GTVQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             CceeeccccCCcccCCHHHHhc
Confidence            22 2223468999999999875


No 69 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97  E-value=9.2e-31  Score=237.11  Aligned_cols=173  Identities=29%  Similarity=0.423  Sum_probs=145.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .++|+..+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            467889999999999999999876 688999999864432 233467889999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++ ++|.+++..  ....+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||++.......
T Consensus        84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  157 (303)
T cd07869          84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS  157 (303)
T ss_pred             CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence            996 677777653  335688999999999999999999999   99999999999999999999999999986543333


Q ss_pred             ccccccccccCccccccccCC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .......+++.|+|||++.+.
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~  178 (303)
T cd07869         158 HTYSNEVVTLWYRPPDVLLGS  178 (303)
T ss_pred             ccCCCCcccCCCCChHHHcCC
Confidence            222344689999999998754


No 70 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97  E-value=9.5e-31  Score=239.24  Aligned_cols=169  Identities=32%  Similarity=0.414  Sum_probs=141.5

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHH-HHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVD-LLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||+||+|+.. +++.||+|.+....   .....++.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            46999999999999875 68899999986432   223344555555 56789999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|+++||+|||++   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  154 (323)
T cd05575          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS  154 (323)
T ss_pred             CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence            999988853   35689999999999999999999999   999999999999999999999999999865433333333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||+.|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (323)
T cd05575         155 TFCGTPEYLAPEVLRKQPYD  174 (323)
T ss_pred             cccCChhhcChhhhcCCCCC
Confidence            45799999999999887764


No 71 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97  E-value=7.5e-31  Score=239.70  Aligned_cols=170  Identities=31%  Similarity=0.388  Sum_probs=144.0

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ++||+|+||.||+|+.. +++.||+|.+...   .......+..|.+++..+ +||||+++++++.+.+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999875 5789999998643   233445677899998876 799999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|...+..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||++...........
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  154 (321)
T cd05591          81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT  154 (321)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence            999988853   34689999999999999999999999   999999999999999999999999999875433333333


Q ss_pred             ccccccCccccccccCCcCcc
Q 019842          312 KLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ...|++.|+|||++.+..++.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~  175 (321)
T cd05591         155 TFCGTPDYIAPEILQELEYGP  175 (321)
T ss_pred             ccccCccccCHHHHcCCCCCC
Confidence            457899999999998877653


No 72 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.97  E-value=7.5e-31  Score=240.02  Aligned_cols=172  Identities=28%  Similarity=0.385  Sum_probs=144.1

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHH---hcCCCCceeEEeeEEEeCCeEEEE
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLL---SNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      |...+.||+|+||.||+|... +++.||+|.++...   ....+.+.+|++++   ++++||||+++++++.+.+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            556789999999999999865 68899999986432   22345566676554   567899999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++|+|...++.    ..+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++....
T Consensus        81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05589          81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG  153 (324)
T ss_pred             EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence            999999999888742    4689999999999999999999999   999999999999999999999999999865433


Q ss_pred             CCccccccccccCccccccccCCcCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .........|++.|+|||++.++.++
T Consensus       154 ~~~~~~~~~g~~~y~aPE~~~~~~~~  179 (324)
T cd05589         154 FGDRTSTFCGTPEFLAPEVLTETSYT  179 (324)
T ss_pred             CCCcccccccCccccCHhHhcCCCCC
Confidence            33333345799999999999887665


No 73 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97  E-value=7.4e-31  Score=239.67  Aligned_cols=170  Identities=30%  Similarity=0.400  Sum_probs=144.1

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +++.||+|.+...   .......+.+|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999875 5789999998643   233456678888888877 699999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~  154 (320)
T cd05590          81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS  154 (320)
T ss_pred             chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence            999988853   34689999999999999999999999   999999999999999999999999999875433333333


Q ss_pred             ccccccCccccccccCCcCcc
Q 019842          312 KLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ...||+.|+|||++.+..++.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~  175 (320)
T cd05590         155 TFCGTPDYIAPEILQEMLYGP  175 (320)
T ss_pred             ccccCccccCHHHHcCCCCCC
Confidence            457999999999998776653


No 74 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97  E-value=8.6e-31  Score=239.56  Aligned_cols=174  Identities=26%  Similarity=0.317  Sum_probs=146.6

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~  226 (335)
                      +|+..+.||+|+||.||+|+.. +++.||+|.+...   .....+.+..|..++..++ |++|+++++++.+.+..|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4667889999999999999865 6889999998643   2334456788999998885 577888999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++.....
T Consensus        81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence            99999999988853   35699999999999999999999999   9999999999999999999999999998754333


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ........||+.|+|||++.++.++
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05615         155 GVTTRTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             CccccCccCCccccCHHHHcCCCCC
Confidence            3333345689999999999887664


No 75 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97  E-value=1.3e-30  Score=250.35  Aligned_cols=177  Identities=20%  Similarity=0.213  Sum_probs=150.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-C-CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-D-NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .|...+.||+|++|.||+|... + +..|++|.+..........+.+|+++++.++||||+++++++..++..|+||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            3778899999999999999754 3 5778888876555555667889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          230 ENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       230 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++|+|.+++... ....++++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++.......
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            999999887532 2345689999999999999999999999   999999999999999999999999999976543221


Q ss_pred             --cccccccccCccccccccCCcCc
Q 019842          309 --NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 --~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        .....+||+.|+|||++.++.++
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~  249 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYS  249 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCC
Confidence              22345699999999999887765


No 76 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97  E-value=1.2e-30  Score=239.50  Aligned_cols=172  Identities=24%  Similarity=0.315  Sum_probs=146.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+++.. +++.||+|.+...   .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            47888999999999999999865 5889999998632   2233456889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..  ....+++..+..++.|++.||+|||++   +++||||||+|||++.++.+||+|||++......
T Consensus        81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             ecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence            99999999999853  245689999999999999999999999   9999999999999999999999999998654432


Q ss_pred             Cc-cccccccccCccccccccC
Q 019842          307 NK-NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       307 ~~-~~~~~~gt~~y~aPE~l~~  327 (335)
                      .. ......||+.|+|||++..
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05597         156 GTVQSNVAVGTPDYISPEILQA  177 (331)
T ss_pred             CCccccceeccccccCHHHHhh
Confidence            22 1222468999999999873


No 77 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97  E-value=1.1e-30  Score=238.16  Aligned_cols=169  Identities=28%  Similarity=0.390  Sum_probs=141.6

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +++.||+|.++..   .......+..|..++... +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999875 5788999998643   223344566677777654 899999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++..........
T Consensus        81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~  154 (316)
T cd05592          81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS  154 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence            999988853   34689999999999999999999999   999999999999999999999999999976433333333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||+.|+|||++.+..++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05592         155 TFCGTPDYIAPEILKGQKYN  174 (316)
T ss_pred             cccCCccccCHHHHcCCCCC
Confidence            45799999999999887664


No 78 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97  E-value=1.1e-30  Score=238.65  Aligned_cols=169  Identities=31%  Similarity=0.399  Sum_probs=140.4

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHH-HHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVD-LLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ++||+|+||.||+|+.. +++.||+|.+....   .....++.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999875 57899999985432   223344555654 67889999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|...+..   ...+++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+|||+++..........
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  154 (321)
T cd05603          81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS  154 (321)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence            999888753   35688999999999999999999999   999999999999999999999999999865433333333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...|++.|+|||++.+..++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05603         155 TFCGTPEYLAPEVLRKEPYD  174 (321)
T ss_pred             cccCCcccCCHHHhcCCCCC
Confidence            45789999999999877664


No 79 
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97  E-value=1.2e-31  Score=244.65  Aligned_cols=178  Identities=30%  Similarity=0.411  Sum_probs=158.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCe-EEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDT-RFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lv~  226 (335)
                      ++|...+++|+|+||.++..+.+ ++..+++|++....  ....+...+|+.++++++|||||.+.+.+.+++. .++||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            46778899999999999988764 56789999986543  3344578899999999999999999999999998 99999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      +|++||++.+.+...+ +..++++..+.++.|++.|+.|||++   .|+|||||+.||+++.++.+||+|||+|+..+..
T Consensus        84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            9999999999987643 67799999999999999999999998   9999999999999999999999999999988877


Q ss_pred             CccccccccccCccccccccCCcCcc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .....+..||+.||.||.+.+-+|+.
T Consensus       160 ~~~a~tvvGTp~YmcPEil~d~pYn~  185 (426)
T KOG0589|consen  160 DSLASTVVGTPYYMCPEILSDIPYNE  185 (426)
T ss_pred             hhhhheecCCCcccCHHHhCCCCCCc
Confidence            65556778999999999999999863


No 80 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97  E-value=1.1e-30  Score=240.89  Aligned_cols=176  Identities=31%  Similarity=0.412  Sum_probs=154.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCc---hhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQ---DAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~  223 (335)
                      ....|+..+.||+|.||.||+++... |+.+|+|.+.....   .....+.+|+.+|+++. |||||.+.+++++.+..+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            45577888999999999999998764 99999999965433   24468999999999998 999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC----CcEEEEcccC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK----FNAKLSDFGL  299 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~----~~~kl~Dfgl  299 (335)
                      +|||++.+|.|.+.+...    .+++..+..++.|++.+++|||+.   +++||||||+|+|+...    +.+|++|||+
T Consensus       113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            999999999999998653    399999999999999999999998   99999999999999643    4799999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCCcCcc
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      +..... .......+||+.|+|||++....|+.
T Consensus       186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~  217 (382)
T KOG0032|consen  186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGD  217 (382)
T ss_pred             ceEccC-CceEeeecCCccccCchhhcCCCCCc
Confidence            988766 44455678999999999999777653


No 81 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97  E-value=1.5e-30  Score=238.51  Aligned_cols=172  Identities=26%  Similarity=0.316  Sum_probs=147.8

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+++.. +++.||+|.++...   ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            46888999999999999999865 68899999986432   234566889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..  ....+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++......
T Consensus        81 e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNR--YEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            99999999999864  235699999999999999999999999   9999999999999999999999999999765433


Q ss_pred             Cc-cccccccccCccccccccC
Q 019842          307 NK-NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       307 ~~-~~~~~~gt~~y~aPE~l~~  327 (335)
                      .. ......||+.|+|||++..
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         156 KMVNSKLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             CceeeecccCCccccCHHHhcc
Confidence            22 1223468999999999873


No 82 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.97  E-value=1.8e-30  Score=236.72  Aligned_cols=169  Identities=29%  Similarity=0.419  Sum_probs=142.3

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +++.||+|.++...   ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999875 47889999986431   23345567788888764 999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++...........
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  154 (316)
T cd05619          81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC  154 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence            999998853   34689999999999999999999999   999999999999999999999999999875433333333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||..|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05619         155 TFCGTPDYIAPEILLGQKYN  174 (316)
T ss_pred             eecCCccccCHHHHcCCCCC
Confidence            45789999999999877654


No 83 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97  E-value=8.9e-31  Score=243.77  Aligned_cols=174  Identities=24%  Similarity=0.301  Sum_probs=147.9

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..++|+..+.||+|+||.||+++.. ++..||+|.+...   .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            4567888999999999999999875 5889999998542   22334557899999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||+++|+|.+++..    ..+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||++....
T Consensus       121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999998853    3478889999999999999999999   99999999999999999999999999997654


Q ss_pred             CCCc-cccccccccCccccccccCCc
Q 019842          305 SQNK-NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       305 ~~~~-~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .... ......||+.|+|||++.+..
T Consensus       194 ~~~~~~~~~~~gt~~y~aPE~~~~~~  219 (370)
T cd05596         194 ANGMVRCDTAVGTPDYISPEVLKSQG  219 (370)
T ss_pred             CCCcccCCCCCCCcCeECHHHhccCC
Confidence            3221 222346999999999987643


No 84 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97  E-value=2.2e-30  Score=237.24  Aligned_cols=169  Identities=24%  Similarity=0.361  Sum_probs=144.4

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +++.||+|.+...   .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999875 5788999999643   223445688999999888 699999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  154 (327)
T cd05617          81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS  154 (327)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence            999888753   34699999999999999999999999   999999999999999999999999999875333223333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||+.|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (327)
T cd05617         155 TFCGTPNYIAPEILRGEEYG  174 (327)
T ss_pred             cccCCcccCCHHHHCCCCCC
Confidence            45799999999999887765


No 85 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.97  E-value=1.8e-30  Score=237.58  Aligned_cols=169  Identities=30%  Similarity=0.393  Sum_probs=139.7

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHH-HHHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEV-DLLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. +++.||+|.+....   ......+.+|. .+++.++|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            46999999999999875 56789999986432   22233444454 456788999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+.+.....++.|+++||+|||+.   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~  154 (325)
T cd05602          81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS  154 (325)
T ss_pred             CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence            999998853   34578888999999999999999999   999999999999999999999999999865433333334


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||+.|+|||++.+..++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQPYD  174 (325)
T ss_pred             cccCCccccCHHHHcCCCCC
Confidence            45799999999999887664


No 86 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97  E-value=2e-30  Score=237.90  Aligned_cols=172  Identities=24%  Similarity=0.326  Sum_probs=145.3

Q ss_pred             CCcccceeeecccEEEEEEEe----CCCceEEEEEeccc----CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeE
Q 019842          152 SFHESNILGEGGFGCVYKAKL----DDNLHVAVKKLDCA----TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  222 (335)
                      +|+..+.||+|+||.||+++.    .+++.||+|.+...    .....+.+.+|++++.++ +|+||+++++++.+.+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            477889999999999999875    35789999998542    222345688999999999 599999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++||||+++|+|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            999999999999998853   34689999999999999999999999   999999999999999999999999999865


Q ss_pred             CCCCC-ccccccccccCccccccccCCc
Q 019842          303 DGSQN-KNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       303 ~~~~~-~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ..... .......||..|+|||++.+..
T Consensus       155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~  182 (332)
T cd05614         155 FLSEEKERTYSFCGTIEYMAPEIIRGKG  182 (332)
T ss_pred             ccccCCCccccccCCccccCHHHhcCCC
Confidence            43222 2223457999999999987643


No 87 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97  E-value=2.3e-30  Score=231.94  Aligned_cols=170  Identities=27%  Similarity=0.359  Sum_probs=144.3

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||+||++... +++.||+|.+....   ......+..|++++++++|+||+++.+++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            689999999999865 68899999986432   22335678899999999999999999999999999999999999999


Q ss_pred             hHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccccc
Q 019842          235 DIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKL  313 (335)
Q Consensus       235 ~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~  313 (335)
                      ..++... .....+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++.............
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence            8877532 2345689999999999999999999999   99999999999999999999999999997654433333345


Q ss_pred             ccccCccccccccCCcCc
Q 019842          314 SGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       314 ~gt~~y~aPE~l~~~~~~  331 (335)
                      .|++.|+|||++.++.++
T Consensus       158 ~g~~~y~aPE~~~~~~~~  175 (280)
T cd05608         158 AGTPGFMAPELLQGEEYD  175 (280)
T ss_pred             CCCcCccCHHHhcCCCCC
Confidence            689999999999888765


No 88 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97  E-value=1.1e-30  Score=243.68  Aligned_cols=180  Identities=27%  Similarity=0.357  Sum_probs=148.0

Q ss_pred             HhcCCcccceeeecccEEEEEEEe------CCCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCC
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL------DDNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDD  220 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  220 (335)
                      ..++|+..+.||+|+||.||+|+.      +++..||||+++... ....+.+.+|+.++..+ +||||++++++|.+.+
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            355788899999999999999963      346689999986432 33456788999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHhHHhcCCC----------------------------------------------------------
Q 019842          221 TRFIVYELMENRSLDIQLHGPS----------------------------------------------------------  242 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~----------------------------------------------------------  242 (335)
                      ..++||||+++|+|.+++....                                                          
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            9999999999999998885421                                                          


Q ss_pred             --------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          243 --------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       243 --------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                                    ....+++..++.++.|+++||+|||+.   +++||||||+|||+++++.+||+|||+++.......
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  269 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN  269 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence                          012578999999999999999999999   999999999999999999999999999976543221


Q ss_pred             c--ccccccccCccccccccCCcCc
Q 019842          309 N--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .  .....++..|+|||++.++.++
T Consensus       270 ~~~~~~~~~~~~y~aPE~~~~~~~~  294 (375)
T cd05104         270 YVVKGNARLPVKWMAPESIFNCVYT  294 (375)
T ss_pred             ccccCCCCCCcceeChhHhcCCCCC
Confidence            1  1122345679999999887664


No 89 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97  E-value=1.5e-30  Score=237.20  Aligned_cols=169  Identities=27%  Similarity=0.362  Sum_probs=142.8

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|+.. ++..||+|.++...   ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999875 57899999986432   23345667788888764 899999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|+++||+|||++   +++||||||+|||+++++.+||+|||+++..........
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  154 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS  154 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence            999988853   35689999999999999999999999   999999999999999999999999999865432223333


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...||..|+|||++.++.++
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05620         155 TFCGTPDYIAPEILQGLKYT  174 (316)
T ss_pred             ccCCCcCccCHHHHcCCCCC
Confidence            45799999999999887765


No 90 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97  E-value=1.8e-30  Score=241.71  Aligned_cols=178  Identities=24%  Similarity=0.300  Sum_probs=150.4

Q ss_pred             HHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC
Q 019842          145 LLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD  220 (335)
Q Consensus       145 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  220 (335)
                      .++...++|+..+.||+|+||.||+++.. +++.+|+|.+...   .......+.+|+.+++.++||||+++++++.+++
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            34445678999999999999999999875 5788999998532   2233456789999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ..++||||+++|+|.+++..    ..+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||++
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a  189 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC  189 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence            99999999999999998853    3478899999999999999999999   9999999999999999999999999999


Q ss_pred             eeCCCCCc-cccccccccCccccccccCCc
Q 019842          301 ITDGSQNK-NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       301 ~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +....... ......||+.|+|||++.+..
T Consensus       190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  219 (371)
T cd05622         190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQG  219 (371)
T ss_pred             eEcCcCCcccccCcccCccccCHHHHhccC
Confidence            76543221 222456999999999997543


No 91 
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97  E-value=3.1e-30  Score=236.73  Aligned_cols=172  Identities=24%  Similarity=0.319  Sum_probs=145.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+++.. +++.+|+|.+...   .......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            47888999999999999999876 4678999998532   2223455889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++|+|.+++..  ....+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||++......
T Consensus        81 ey~~~g~L~~~l~~--~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             eccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence            99999999999863  234689999999999999999999999   9999999999999999999999999998654322


Q ss_pred             Cc-cccccccccCccccccccC
Q 019842          307 NK-NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       307 ~~-~~~~~~gt~~y~aPE~l~~  327 (335)
                      .. ......||+.|+|||++..
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~  177 (332)
T cd05623         156 GTVQSSVAVGTPDYISPEILQA  177 (332)
T ss_pred             CcceecccccCccccCHHHHhc
Confidence            21 2223468999999999863


No 92 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97  E-value=3.8e-30  Score=236.07  Aligned_cols=175  Identities=29%  Similarity=0.388  Sum_probs=150.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .++|+..+.||+|+||.||+++.. ++..+|+|.+.... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            468889999999999999999876 57889999886542 3345679999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|||+..  +++||||||+|||+++++.+||+|||++.......
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  158 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence            9999999999853   346899999999999999999999852  69999999999999999999999999986543322


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        .....|+..|+|||++.+..++
T Consensus       159 --~~~~~g~~~y~aPE~~~~~~~~  180 (331)
T cd06649         159 --ANSFVGTRSYMSPERLQGTHYS  180 (331)
T ss_pred             --cccCCCCcCcCCHhHhcCCCCC
Confidence              2234689999999999887664


No 93 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97  E-value=2e-30  Score=230.49  Aligned_cols=178  Identities=28%  Similarity=0.382  Sum_probs=148.3

Q ss_pred             hcCCcccceeeecccEEEEEEEeC----CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD----DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .++|+..+.||+|+||.||+|.+.    .+..||+|.++... ......+.+|+..+++++||||++++|++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356788899999999999999763    35689999987543 3344678999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||+++|+|.+++..  ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+|++|||.+....
T Consensus        84 v~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          84 VTEYMSNGALDSFLRK--HEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             EEEeCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence            9999999999999864  235689999999999999999999999   99999999999999999999999999875432


Q ss_pred             CCCc-cccccccccCccccccccCCcCcc
Q 019842          305 SQNK-NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       305 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .... ......++..|+|||.+.++.++.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  187 (266)
T cd05064         159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSS  187 (266)
T ss_pred             ccchhcccCCCCceeecCHHHHhhCCccc
Confidence            2211 111223567899999998877653


No 94 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.97  E-value=2e-30  Score=232.76  Aligned_cols=176  Identities=24%  Similarity=0.385  Sum_probs=148.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|+..+.||+|+||.||+|+.. +++.||+|++....  ......+.+|++++++++||||+++++++.+++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46888999999999999999876 57889999986432  2334678899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++++++.....   ....+++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            999887765542   234689999999999999999999999   99999999999999999999999999997653322


Q ss_pred             -ccccccccccCccccccccCCcCcc
Q 019842          308 -KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       308 -~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                       .......|+..|+|||++.++.++.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (287)
T cd07848         155 NANYTEYVATRWYRSPELLLGAPYGK  180 (287)
T ss_pred             cccccccccccccCCcHHHcCCCCCC
Confidence             1222346899999999998877653


No 95 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.97  E-value=3.8e-30  Score=231.11  Aligned_cols=176  Identities=28%  Similarity=0.370  Sum_probs=148.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      +|+..++||+|+||+||++... +++.||+|.+....   ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            3677889999999999999864 68899999986432   2223457889999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++|+|.+++... ....+++..+..++.|++.||+|||+.   +++||||||+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            99999999887542 234689999999999999999999999   99999999999999999999999999997653322


Q ss_pred             ccccccccccCccccccccCCcCcc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .. ....|+..|+|||++.++.++.
T Consensus       157 ~~-~~~~~~~~y~aPE~~~~~~~~~  180 (285)
T cd05605         157 TI-RGRVGTVGYMAPEVVKNERYTF  180 (285)
T ss_pred             cc-ccccCCCCccCcHHhcCCCCCc
Confidence            21 2346899999999998776654


No 96 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97  E-value=2e-30  Score=240.06  Aligned_cols=166  Identities=27%  Similarity=0.426  Sum_probs=140.6

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      +|+..+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            4455778999999999999865 68899999986443 334567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++|+|...       ....+..+..++.|+++||+|||++   +++||||||+|||+++++.+||+|||+++........
T Consensus       155 ~~~~L~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        155 DGGSLEGT-------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             CCCccccc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            99998543       2356778889999999999999999   9999999999999999999999999999765433322


Q ss_pred             ccccccccCccccccccC
Q 019842          310 NLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~  327 (335)
                      .....|+..|+|||++..
T Consensus       225 ~~~~~gt~~y~aPE~~~~  242 (353)
T PLN00034        225 CNSSVGTIAYMSPERINT  242 (353)
T ss_pred             ccccccCccccCcccccc
Confidence            234468999999999854


No 97 
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97  E-value=3e-31  Score=249.41  Aligned_cols=174  Identities=28%  Similarity=0.403  Sum_probs=150.8

Q ss_pred             cccceeeecccEEEEEEEe-CCCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC------eEEEE
Q 019842          154 HESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD------TRFIV  225 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lv  225 (335)
                      ...+.||+|+||.||+|+. .+|+.||||.+... .....+...+|+++|++++|+|||++++.-++..      ...+|
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            3456899999999999995 57999999999654 3445677899999999999999999999876654      56899


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEc--CCCc--EEEEcccCce
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLD--SKFN--AKLSDFGLAI  301 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~--~~~~--~kl~Dfgla~  301 (335)
                      ||||.+|+|+..|.++.+...|++.+.+.+..+++.||.|||++   +|+||||||.||++-  ++|+  -||+|||.|+
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            99999999999999988888999999999999999999999999   999999999999984  3343  7999999998


Q ss_pred             eCCCCCccccccccccCccccccccC-CcCc
Q 019842          302 TDGSQNKNNLKLSGTLGYVAPEYLLD-GMVG  331 (335)
Q Consensus       302 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~  331 (335)
                      ...+.. ...++.||..|.+||++.+ +.|+
T Consensus       173 el~d~s-~~~S~vGT~~YLhPel~E~q~~y~  202 (732)
T KOG4250|consen  173 ELDDNS-LFTSLVGTEEYLHPELYERQKKYT  202 (732)
T ss_pred             cCCCCC-eeeeecCchhhcChHHHhhccCcC
Confidence            876554 5567889999999999996 4443


No 98 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97  E-value=1.7e-31  Score=225.57  Aligned_cols=177  Identities=31%  Similarity=0.445  Sum_probs=150.8

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-----ch---hHHHHHHHHHHHhcC-CCCceeEEeeEEE
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-----QD---AGREFENEVDLLSNI-HHPNVVCLLGYSA  217 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~---~~~~~~~E~~~l~~l-~H~niv~l~g~~~  217 (335)
                      ..-+.|...+.+|.|..+.|.++..+ +|...|+|++....     ++   -..+-.+|+++|+++ -||||+.+.++++
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            34567778899999999999888654 68899999985321     11   123456899999999 6999999999999


Q ss_pred             eCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          218 HDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       218 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                      .+...++|+|.|+.|.|.++|.   ..-.++++...+|+.|+.+|++|||.+   .||||||||+|||+|+|.++||+||
T Consensus        94 s~sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF  167 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF  167 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence            9999999999999999999995   345799999999999999999999999   9999999999999999999999999


Q ss_pred             cCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          298 GLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       298 gla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |+|........ -...|||++|.|||.+....+.
T Consensus       168 GFa~~l~~Gek-LrelCGTPgYLAPEtikC~m~e  200 (411)
T KOG0599|consen  168 GFACQLEPGEK-LRELCGTPGYLAPETIKCSMYE  200 (411)
T ss_pred             ceeeccCCchh-HHHhcCCCcccChhheeeeccc
Confidence            99988765443 3467999999999999766553


No 99 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97  E-value=3e-30  Score=236.98  Aligned_cols=175  Identities=29%  Similarity=0.399  Sum_probs=149.3

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .++|+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            468889999999999999999876 57888999886542 3345678999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++|+|.+++..   ...+++.....++.|++.||.|||+..  +++||||||+|||+++++.+||+|||++.......
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~  158 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence            9999999999853   346889999999999999999999742  69999999999999999999999999986543221


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        .....|+..|+|||++.+..++
T Consensus       159 --~~~~~~~~~y~aPE~~~~~~~~  180 (333)
T cd06650         159 --ANSFVGTRSYMSPERLQGTHYS  180 (333)
T ss_pred             --cccCCCCccccCHHHhcCCCCC
Confidence              1234689999999999876654


No 100
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=5.2e-32  Score=242.02  Aligned_cols=175  Identities=30%  Similarity=0.413  Sum_probs=154.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..|...+.||+|.||.||+|... +++.||+|.+... .+....++++|+.+++.++++||.++||.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            34556688999999999999764 6889999999765 455567899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      |.+|++.+.|.   .+..+++....-+++++..||.|||.+   +.+|||||+.|||+..+|.+|++|||.+........
T Consensus        93 ~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            99999999884   345568888889999999999999999   999999999999999999999999999988776666


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...++.||+.|||||++....|+
T Consensus       167 rr~tfvGTPfwMAPEVI~~~~Y~  189 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQSGYD  189 (467)
T ss_pred             ccccccccccccchhhhcccccc
Confidence            65778999999999999965553


No 101
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=6.4e-32  Score=248.64  Aligned_cols=173  Identities=32%  Similarity=0.433  Sum_probs=148.1

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .|...+-||.|+||.||-|+.. +...||||++.-.   +.+..+++.+|+..|.+++|||++.+-||+......|||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            4566778999999999999764 6788999999644   33456789999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      ||- |+..+.+..  ...++.+.++..|+.+.+.||+|||+.   +.||||||+.||||++.|.+||+|||.|....+. 
T Consensus       107 YCl-GSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-  179 (948)
T KOG0577|consen  107 YCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-  179 (948)
T ss_pred             HHh-ccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence            996 666666642  346799999999999999999999999   9999999999999999999999999998554333 


Q ss_pred             ccccccccccCccccccccCCcCcccc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVGKFL  334 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~~~~  334 (335)
                         .++.||+.|||||++.-..=|.||
T Consensus       180 ---nsFvGTPywMAPEVILAMDEGqYd  203 (948)
T KOG0577|consen  180 ---NSFVGTPYWMAPEVILAMDEGQYD  203 (948)
T ss_pred             ---hcccCCccccchhHheeccccccC
Confidence               256899999999999766656664


No 102
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97  E-value=1.2e-30  Score=230.95  Aligned_cols=180  Identities=29%  Similarity=0.443  Sum_probs=155.6

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ....+|+..+.||+|+||.||+|...++..+++|.+.........++.+|+++++.++|+||+++++++.+.+..++|||
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            34567888999999999999999988899999999976666566789999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|.+++... ....+++..++.++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++.......
T Consensus        83 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~  158 (261)
T cd05148          83 LMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV  158 (261)
T ss_pred             ecccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence            99999999999753 345689999999999999999999999   99999999999999999999999999986654332


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......++..|+|||++.++.++
T Consensus       159 ~~~~~~~~~~~~~~PE~~~~~~~~  182 (261)
T cd05148         159 YLSSDKKIPYKWTAPEAASHGTFS  182 (261)
T ss_pred             ccccCCCCceEecCHHHHccCCCC
Confidence            222233456789999998876654


No 103
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97  E-value=4.1e-30  Score=234.58  Aligned_cols=170  Identities=30%  Similarity=0.382  Sum_probs=144.2

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||+||+|+.. +++.||+|.+...   .......+.+|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999875 4789999998643   233455678899999888 799999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|++.||.|||+.   +++||||||+||++++++.+||+|||+++..........
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  154 (318)
T cd05570          81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS  154 (318)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence            999988853   34699999999999999999999999   999999999999999999999999999865333333333


Q ss_pred             ccccccCccccccccCCcCcc
Q 019842          312 KLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ...|+..|+|||++.+..++.
T Consensus       155 ~~~g~~~y~aPE~~~~~~~~~  175 (318)
T cd05570         155 TFCGTPDYIAPEILSYQPYGP  175 (318)
T ss_pred             ceecCccccCHHHhcCCCCCc
Confidence            456899999999998877653


No 104
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97  E-value=2.2e-30  Score=241.44  Aligned_cols=181  Identities=28%  Similarity=0.410  Sum_probs=147.1

Q ss_pred             HHhcCCcccceeeecccEEEEEEEe------CCCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKL------DDNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD  219 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  219 (335)
                      ...++|+..+.||+|+||.||+|+.      +++..||+|++.... ......+.+|+++++.+ +|+||++++++|.+.
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            3456788899999999999999874      234579999996543 33456688999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCC---------------------------------------------------------
Q 019842          220 DTRFIVYELMENRSLDIQLHGPS---------------------------------------------------------  242 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~---------------------------------------------------------  242 (335)
                      +..++||||+++|+|.++++...                                                         
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            99999999999999998875311                                                         


Q ss_pred             ----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc--c
Q 019842          243 ----------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN--N  310 (335)
Q Consensus       243 ----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~  310 (335)
                                ....+++..+++++.|+++||+|||++   +++||||||+|||+++++.+||+|||+++........  .
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~  271 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK  271 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence                      112478899999999999999999999   9999999999999999999999999998654332211  1


Q ss_pred             cccccccCccccccccCCcCc
Q 019842          311 LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....++..|||||++.++.++
T Consensus       272 ~~~~~~~~y~aPE~~~~~~~~  292 (374)
T cd05106         272 GNARLPVKWMAPESIFDCVYT  292 (374)
T ss_pred             cCCCCccceeCHHHhcCCCCC
Confidence            122345689999999877654


No 105
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.97  E-value=8.2e-30  Score=226.35  Aligned_cols=172  Identities=27%  Similarity=0.361  Sum_probs=149.2

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .++|+..+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++|+||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            35788899999999999999986 46788999998755555566788999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.++++.   ...+++..+..++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06646          88 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA  161 (267)
T ss_pred             CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence            999999998853   34689999999999999999999999   999999999999999999999999999976543332


Q ss_pred             cccccccccCccccccccC
Q 019842          309 NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~  327 (335)
                      ......++..|+|||.+..
T Consensus       162 ~~~~~~~~~~y~~PE~~~~  180 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAV  180 (267)
T ss_pred             ccCccccCccccCHhHccc
Confidence            2234468899999999853


No 106
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97  E-value=2.9e-29  Score=260.55  Aligned_cols=169  Identities=28%  Similarity=0.471  Sum_probs=141.3

Q ss_pred             HhcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ....+...++||+|+||.||+|+. .++..||||+++.....    ..+|++.+++++||||++++|+|.+.+..++|||
T Consensus       688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            345677889999999999999987 57899999998643321    2356889999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++|+|.++++      .++|..+.+++.|+|+||+|||+.+.++++||||||+||+++.++.+++. ||.+...... 
T Consensus       764 y~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-  835 (968)
T PLN00113        764 YIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-  835 (968)
T ss_pred             CCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-
Confidence            999999999984      38999999999999999999997767799999999999999999998876 6655332111 


Q ss_pred             ccccccccccCccccccccCCcCcc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                         ....++..|||||++.++.+++
T Consensus       836 ---~~~~~t~~y~aPE~~~~~~~~~  857 (968)
T PLN00113        836 ---TKCFISSAYVAPETRETKDITE  857 (968)
T ss_pred             ---CCccccccccCcccccCCCCCc
Confidence               1225789999999998887764


No 107
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97  E-value=5.3e-30  Score=240.34  Aligned_cols=182  Identities=27%  Similarity=0.377  Sum_probs=148.8

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCC-CCceeEEeeEEEe
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIH-HPNVVCLLGYSAH  218 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~  218 (335)
                      +...++|.+.+.||+|+||.||+|+..      .+..||+|++.... ....+.+.+|++++++++ ||||++++++|.+
T Consensus        33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~  112 (400)
T cd05105          33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK  112 (400)
T ss_pred             eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence            444678888999999999999999753      23479999996543 334567999999999996 9999999999999


Q ss_pred             CCeEEEEEEecCCCCHhHHhcCCC--------------------------------------------------------
Q 019842          219 DDTRFIVYELMENRSLDIQLHGPS--------------------------------------------------------  242 (335)
Q Consensus       219 ~~~~~lv~E~~~~g~L~~~l~~~~--------------------------------------------------------  242 (335)
                      .+..++||||+++|+|.++++...                                                        
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (400)
T cd05105         113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML  192 (400)
T ss_pred             CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence            999999999999999998875321                                                        


Q ss_pred             -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEE
Q 019842          243 -------------------------------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNIL  285 (335)
Q Consensus       243 -------------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nil  285 (335)
                                                           ....+++..+..++.|+++||+|||+.   +++||||||+|||
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil  269 (400)
T cd05105         193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL  269 (400)
T ss_pred             hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence                                                 012478889999999999999999999   9999999999999


Q ss_pred             EcCCCcEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          286 LDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       286 l~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +++++.+||+|||+++.......  ......++..|+|||++.++.++
T Consensus       270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  317 (400)
T cd05105         270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYT  317 (400)
T ss_pred             EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCC
Confidence            99999999999999975432221  11223467889999999887664


No 108
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97  E-value=1.3e-30  Score=250.90  Aligned_cols=177  Identities=27%  Similarity=0.382  Sum_probs=146.9

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeCCC-ceEEEEEecccCchhHHHHHHHHHHHhcCC-CCceeEEeeE-EEe---C-
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLDDN-LHVAVKKLDCATQDAGREFENEVDLLSNIH-HPNVVCLLGY-SAH---D-  219 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~-~~~---~-  219 (335)
                      +....++.+.++|.+|||+.||.|....+ ..+|+|++-..++...+.+++|+++|++|+ |+|||.+++. ...   . 
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence            34455677889999999999999998766 999999998778889999999999999996 9999999993 221   1 


Q ss_pred             --CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          220 --DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       220 --~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                        -+.+|.||||.+|.|-+++..+.. ..|++.++++|+.|+++|+++||.. .++|||||||.+||||+.++..|||||
T Consensus       113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq-~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF  190 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGGSLVDFMNTRLQ-TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF  190 (738)
T ss_pred             ceeEEEeehhhccCCcHHHHHHHHHh-ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence              267999999999999999875433 3499999999999999999999985 788999999999999999999999999


Q ss_pred             cCceeC--CCCCcc-------ccccccccCccccccc
Q 019842          298 GLAITD--GSQNKN-------NLKLSGTLGYVAPEYL  325 (335)
Q Consensus       298 gla~~~--~~~~~~-------~~~~~gt~~y~aPE~l  325 (335)
                      |.|...  ......       ....-.|+.|+|||++
T Consensus       191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMI  227 (738)
T KOG1989|consen  191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMI  227 (738)
T ss_pred             cccccccCCCccHHHHHHHHHHHHhhCCccccChHHH
Confidence            998322  111111       1112368999999998


No 109
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97  E-value=8.4e-30  Score=253.77  Aligned_cols=178  Identities=26%  Similarity=0.356  Sum_probs=148.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|... +++.||+|++...   .....+++.+|++++++++||||+++++++.+++..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            47888999999999999999875 5889999998643   2233567999999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          227 ELMENRSLDIQLHGPS--------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                      ||+++|+|.+++....        ....+++..+++++.|+++||+|||+.   +++||||||+||+++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence            9999999998885311        123467788899999999999999999   99999999999999999999999999


Q ss_pred             CceeCCCCC------------------ccccccccccCccccccccCCcCc
Q 019842          299 LAITDGSQN------------------KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       299 la~~~~~~~------------------~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +++......                  .......||+.|||||++.++.++
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S  209 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPAS  209 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCC
Confidence            996541100                  011124689999999999887765


No 110
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97  E-value=7.2e-30  Score=239.09  Aligned_cols=170  Identities=24%  Similarity=0.327  Sum_probs=144.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .++|+..+.||+|+||.||++... +++.||+|...      ...+.+|++++++++||||+++++++...+..++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            367999999999999999999864 67899999753      23568899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC-C
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ-N  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~-~  307 (335)
                      +. ++|..++..   ...+++..++.++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+++..... .
T Consensus       165 ~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~  237 (391)
T PHA03212        165 YK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA  237 (391)
T ss_pred             CC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence            95 788887743   34689999999999999999999999   9999999999999999999999999999643221 1


Q ss_pred             ccccccccccCccccccccCCcCcc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .......||+.|+|||++.++.++.
T Consensus       238 ~~~~~~~gt~~y~aPE~~~~~~~~~  262 (391)
T PHA03212        238 NKYYGWAGTIATNAPELLARDPYGP  262 (391)
T ss_pred             cccccccCccCCCChhhhcCCCCCc
Confidence            2223457999999999998877653


No 111
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97  E-value=2.8e-32  Score=233.20  Aligned_cols=172  Identities=29%  Similarity=0.358  Sum_probs=152.8

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      -|.+...||+|.||.||+|.++ .|+.+|+|++..  ..+.+++.+|+.+|++.+.|++|++||.+.....+|+|||||.
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            4566788999999999999764 699999999864  3467889999999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      .|+..+.++.  ++.+|++.++..++.+.++||+|||..   .-+|||||+.||||+.+|.+||+|||.|....+.-...
T Consensus       112 AGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  112 AGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             CCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            9999999874  457899999999999999999999998   88999999999999999999999999997776655555


Q ss_pred             cccccccCccccccccCCcC
Q 019842          311 LKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ....||+.|||||++..=-|
T Consensus       187 NTVIGTPFWMAPEVI~EIGY  206 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEIGY  206 (502)
T ss_pred             CccccCcccccHHHHHHhcc
Confidence            56789999999999875433


No 112
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97  E-value=1.2e-29  Score=228.10  Aligned_cols=175  Identities=32%  Similarity=0.442  Sum_probs=141.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC--CCceEEEEEecccC--chhHHHHHHHHHHHhcC---CCCceeEEeeEEEe-----
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD--DNLHVAVKKLDCAT--QDAGREFENEVDLLSNI---HHPNVVCLLGYSAH-----  218 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~-----  218 (335)
                      ++|+..+.||+|+||.||+|+..  ++..||+|.++...  ......+.+|+.+++.+   +||||++++++|..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36888899999999999999863  46789999886432  22234566777777665   69999999999863     


Q ss_pred             CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          219 DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       219 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                      ....++||||++ ++|.+++... ....+++..+..++.|++.||+|||++   +++||||||+|||+++++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence            346899999997 6888888642 234589999999999999999999999   99999999999999999999999999


Q ss_pred             CceeCCCCCccccccccccCccccccccCCcCc
Q 019842          299 LAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       299 la~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +++..... .......|++.|+|||++.++.++
T Consensus       156 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  187 (290)
T cd07862         156 LARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYA  187 (290)
T ss_pred             ceEeccCC-cccccccccccccChHHHhCCCCC
Confidence            99765433 222344689999999999877664


No 113
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97  E-value=9.4e-30  Score=224.69  Aligned_cols=175  Identities=27%  Similarity=0.384  Sum_probs=147.4

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      ++|+..+.||+|+||.||++.+.++..+|+|.+.... ....++.+|++++++++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            4577788999999999999999888899999886432 234678899999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc-
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN-  309 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-  309 (335)
                      +|+|.++++..  ...+++..++.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||+++........ 
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05114          83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS  157 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence            99999988642  24689999999999999999999999   9999999999999999999999999998654322211 


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||++.++.++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~  179 (256)
T cd05114         158 SSGAKFPVKWSPPEVFNFSKYS  179 (256)
T ss_pred             cCCCCCchhhCChhhcccCccc
Confidence            1122355689999999776554


No 114
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97  E-value=9e-30  Score=233.86  Aligned_cols=169  Identities=28%  Similarity=0.397  Sum_probs=140.4

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TRF  223 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  223 (335)
                      +|+..+.||+|+||.||+|+.. ++..||+|++...  ......++.+|++++++++||||+++++++...+     ..|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4777899999999999999865 6899999998643  2334457889999999999999999999886432     579


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +||||++ ++|.+.+..   ...+++..+..++.|+++||+|||++   +++||||||+|||+++++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999996 688888743   34689999999999999999999999   9999999999999999999999999998654


Q ss_pred             CCCC---ccccccccccCccccccccC
Q 019842          304 GSQN---KNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       304 ~~~~---~~~~~~~gt~~y~aPE~l~~  327 (335)
                      ....   .......|+..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~  180 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGS  180 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhc
Confidence            2211   11223468999999999865


No 115
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97  E-value=8.8e-30  Score=232.08  Aligned_cols=175  Identities=29%  Similarity=0.448  Sum_probs=144.6

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCc----eEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNL----HVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ++|+..+.||+|+||.||+|++. ++.    .||+|.++... ....+++.+|+.+++.++||||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            46888999999999999999863 333    48999986543 34557799999999999999999999999875 5689


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ++||+++|+|.+++..  ....+++..++.++.|+++||+|||+.   +++||||||+|||+++++.+||+|||+++...
T Consensus        86 v~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          86 ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccccc
Confidence            9999999999999864  234688999999999999999999999   99999999999999999999999999997654


Q ss_pred             CCCcc--ccccccccCccccccccCCcCc
Q 019842          305 SQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....  .....++..|+|||++.++.++
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~  189 (316)
T cd05108         161 ADEKEYHAEGGKVPIKWMALESILHRIYT  189 (316)
T ss_pred             CCCcceeccCCccceeecChHHhccCCCC
Confidence            32221  1112346789999999877654


No 116
>PHA02988 hypothetical protein; Provisional
Probab=99.97  E-value=1.5e-29  Score=227.12  Aligned_cols=163  Identities=20%  Similarity=0.254  Sum_probs=138.7

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchh---HHHHHHHHHHHhcCCCCceeEEeeEEEe----CCeEEEEEEe
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA---GREFENEVDLLSNIHHPNVVCLLGYSAH----DDTRFIVYEL  228 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lv~E~  228 (335)
                      ...||+|++|.||+|.. +|+.||||+++......   .+.+.+|+++|++++||||++++|++.+    ....++||||
T Consensus        25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            46899999999999998 57899999997543322   4678899999999999999999999877    3478999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++|+|.+++..   ...+++...++++.|++.||.|||+..  +++||||||+|||+++++.+||+|||+++.......
T Consensus       104 ~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~  178 (283)
T PHA02988        104 CTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF  178 (283)
T ss_pred             CCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccccc
Confidence            999999999864   346899999999999999999999732  788999999999999999999999999875433221


Q ss_pred             cccccccccCccccccccC
Q 019842          309 NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~  327 (335)
                         ...|+..|+|||++.+
T Consensus       179 ---~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        179 ---KNVNFMVYFSYKMLND  194 (283)
T ss_pred             ---cccCcccccCHHHhhh
Confidence               2357899999999875


No 117
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97  E-value=5.9e-30  Score=237.51  Aligned_cols=176  Identities=26%  Similarity=0.357  Sum_probs=153.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ...|.+.+.||+|.|+.|..|+.. ++..||+|.++...  ....+.+.+|+++|..++|||||+++++......+|+||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            456778899999999999999764 68999999997653  333455899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+.+|.+++++.   +...+.+..+..++.|+.+|++|||++   .|+|||||++|+||+.+.++||+|||++..+...
T Consensus       135 eya~~ge~~~yl~---~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~  208 (596)
T KOG0586|consen  135 EYASGGELFDYLV---KHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG  208 (596)
T ss_pred             EeccCchhHHHHH---hcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeeccc
Confidence            9999999999995   345566788999999999999999999   9999999999999999999999999999777643


Q ss_pred             CccccccccccCccccccccCCcCcc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      . .-.+.+|++.|.|||++.+..|.-
T Consensus       209 ~-~lqt~cgsppyAaPEl~~g~~y~g  233 (596)
T KOG0586|consen  209 L-MLQTFCGSPPYAAPELFNGKKYDG  233 (596)
T ss_pred             c-cccccCCCCCccChHhhcCcccCC
Confidence            3 334568999999999999988753


No 118
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.8e-30  Score=227.56  Aligned_cols=172  Identities=31%  Similarity=0.430  Sum_probs=145.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEec--ccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEe-----CCe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLD--CATQDAGREFENEVDLLSNIHHPNVVCLLGYSAH-----DDT  221 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-----~~~  221 (335)
                      ...|...+.||+|+||.|+.|... +|+.||+|++.  ..+....++-.+|+.+|+.++|+||+.+.+.+..     -+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            345555788999999999999764 68999999997  3456667889999999999999999999998765     357


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      .|+|+|+| ..+|...++   .+..|+......++.|+++||+|+|+.   +++||||||+|+|++.+..+||+|||+|+
T Consensus       101 vYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             eEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccccee
Confidence            89999999 478888884   345599999999999999999999999   99999999999999999999999999998


Q ss_pred             eCCCC--CccccccccccCccccccccCC
Q 019842          302 TDGSQ--NKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       302 ~~~~~--~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....  ....+....|.+|.|||.+.+.
T Consensus       174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~  202 (359)
T KOG0660|consen  174 YLDKFFEDGFMTEYVATRWYRAPELLLNS  202 (359)
T ss_pred             eccccCcccchhcceeeeeecCHHHHhcc
Confidence            87542  2233455779999999998654


No 119
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97  E-value=5.7e-30  Score=226.84  Aligned_cols=173  Identities=39%  Similarity=0.592  Sum_probs=142.4

Q ss_pred             ccceeeecccEEEEEEEeC-----CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          155 ESNILGEGGFGCVYKAKLD-----DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..+.||.|.||.||+|.+.     .+..|+||.+... ..+..+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3578999999999999876     3578999999654 334578899999999999999999999999988889999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++|+|.+++... ....+++..++.|+.|+++||.|||++   +++||||+++||++++++.+||+|||++........
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred             ccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence            9999999999753 346799999999999999999999999   999999999999999999999999999977632211


Q ss_pred             --cccccccccCccccccccCCcCc
Q 019842          309 --NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 --~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ..........|+|||.+.++.++
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~~~~~~  183 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLKDGEYT  183 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHHHSEES
T ss_pred             ccccccccccccccccccccccccc
Confidence              12223467899999999887654


No 120
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97  E-value=1e-29  Score=233.07  Aligned_cols=165  Identities=29%  Similarity=0.370  Sum_probs=137.3

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcC---CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNI---HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ||+|+||+||+|+.. +++.||+|++....   ......+..|..++.+.   +||||+++++++.+.+..|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            699999999999865 58899999985421   22234455677777665   699999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|..++..   ...+++..+..++.|+++||+|||++   +|+||||||+|||+++++.+||+|||++...........
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~  154 (330)
T cd05586          81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN  154 (330)
T ss_pred             ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence            999988853   45689999999999999999999999   999999999999999999999999999865433333333


Q ss_pred             ccccccCccccccccCCc
Q 019842          312 KLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~  329 (335)
                      ...||..|+|||++.++.
T Consensus       155 ~~~gt~~y~aPE~~~~~~  172 (330)
T cd05586         155 TFCGTTEYLAPEVLLDEK  172 (330)
T ss_pred             CccCCccccCHHHHcCCC
Confidence            457999999999987653


No 121
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97  E-value=8.6e-30  Score=227.61  Aligned_cols=181  Identities=27%  Similarity=0.414  Sum_probs=148.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDT  221 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~  221 (335)
                      .+++|+..+.||+|+||.||+|...      ++..||+|++.... .....++.+|+.+++.++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4678899999999999999999753      34679999885432 3345678999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHhHHhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          222 RFIVYELMENRSLDIQLHGPSH-------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                      .++||||+++|+|.+++.....       ...+++..++.++.|+++||.|||+.   +++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence            9999999999999998864221       23468889999999999999999998   9999999999999999999999


Q ss_pred             EcccCceeCCCCCcc--ccccccccCccccccccCCcCcc
Q 019842          295 SDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       295 ~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      +|||+++........  .....++..|+|||++.++.++.
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT  200 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCc
Confidence            999998654322211  11224577899999998877654


No 122
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97  E-value=5.2e-30  Score=233.44  Aligned_cols=172  Identities=31%  Similarity=0.452  Sum_probs=148.1

Q ss_pred             cceeeecccEEEEEEEe-CCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          156 SNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      .++||.|-||+||-|+. ++|+.||||.++..  .......+++|+.+|++++||.||.+...|+..+..++|||-+. |
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence            47899999999999976 47999999999654  23345779999999999999999999999999999999999996 5


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC---CcEEEEcccCceeCCCCCcc
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK---FNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~---~~~kl~Dfgla~~~~~~~~~  309 (335)
                      +..+.+.. ...+.|++.....+..||+.||.|||.+   +|+|+||||+||||.+.   -++||+|||+|+..+.....
T Consensus       648 DMLEMILS-sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  648 DMLEMILS-SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             hHHHHHHH-hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence            55455443 3456799999999999999999999999   99999999999999764   46999999999998876654


Q ss_pred             ccccccccCccccccccCCcCccc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      . +..||+.|.|||++.+.-|++.
T Consensus       724 r-sVVGTPAYLaPEVLrnkGyNrS  746 (888)
T KOG4236|consen  724 R-SVVGTPAYLAPEVLRNKGYNRS  746 (888)
T ss_pred             h-hhcCCccccCHHHHhhcccccc
Confidence            3 5689999999999999988775


No 123
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97  E-value=1.5e-29  Score=223.89  Aligned_cols=177  Identities=26%  Similarity=0.395  Sum_probs=150.7

Q ss_pred             hcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .++|+..+.||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            45788899999999999999998888899999986433 23567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc-
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK-  308 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-  308 (335)
                      ++++|.+++... ....+++..++.++.|+++||+|||+.   +++||||||+||++++++.+||+|||++........ 
T Consensus        84 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          84 AKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            999999998652 345689999999999999999999998   999999999999999999999999999976543221 


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......++..|+|||++..+.++
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~  182 (261)
T cd05072         160 AREGAKFPIKWTAPEAINFGSFT  182 (261)
T ss_pred             ccCCCccceecCCHHHhccCCCC
Confidence            11122356789999999877665


No 124
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97  E-value=1.2e-29  Score=244.29  Aligned_cols=181  Identities=26%  Similarity=0.279  Sum_probs=150.5

Q ss_pred             HHhcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC----
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD----  220 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----  220 (335)
                      ...++|...+.||+|+||+||+|+. .+++.||+|.+...  .......+.+|+..+..++|+|++++++.+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3456899999999999999999975 46899999998643  3445567889999999999999999988765432    


Q ss_pred             ----eEEEEEEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 019842          221 ----TRFIVYELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLS  295 (335)
Q Consensus       221 ----~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~  295 (335)
                          ..++||||+++|+|.+++... .....+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence                368999999999999988642 2345789999999999999999999999   99999999999999999999999


Q ss_pred             cccCceeCCCCC--ccccccccccCccccccccCCcCc
Q 019842          296 DFGLAITDGSQN--KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       296 Dfgla~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |||+++......  .......||+.|+|||++.++.++
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s  223 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYS  223 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCC
Confidence            999997643221  122345799999999999887765


No 125
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97  E-value=1.8e-29  Score=229.28  Aligned_cols=172  Identities=30%  Similarity=0.467  Sum_probs=144.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|...+.||+|+||.||+|+.. ++..||+|.++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            56888899999999999999865 578899999864432 2334678899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++ +|.+++..  ....+++..+..++.|+++||+|||++   +++||||||+||++++++.+||+|||++........
T Consensus        86 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          86 LDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             CCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            984 78777753  234588999999999999999999999   999999999999999999999999999865433332


Q ss_pred             cccccccccCccccccccCC
Q 019842          309 NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......++..|+|||++.++
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~  179 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLGS  179 (309)
T ss_pred             ccccccccccccCCHHHhCC
Confidence            22334678999999998654


No 126
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97  E-value=3.7e-29  Score=223.74  Aligned_cols=168  Identities=28%  Similarity=0.385  Sum_probs=141.5

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||.||+++.. +|+.+|+|.+....   ......+..|++++++++||||+++++++.+++..++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            689999999999865 58999999985321   22334567799999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .+++... ....+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||++........ .....
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~-~~~~~  155 (277)
T cd05607          81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT-ITQRA  155 (277)
T ss_pred             HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce-eeccC
Confidence            8887542 234589999999999999999999999   999999999999999999999999999866543222 22346


Q ss_pred             cccCccccccccCCcCc
Q 019842          315 GTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~~  331 (335)
                      |+..|+|||++.++.++
T Consensus       156 ~~~~y~aPE~~~~~~~~  172 (277)
T cd05607         156 GTNGYMAPEILKEEPYS  172 (277)
T ss_pred             CCCCccCHHHHccCCCC
Confidence            89999999999887764


No 127
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97  E-value=2.8e-29  Score=222.85  Aligned_cols=176  Identities=28%  Similarity=0.434  Sum_probs=147.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC----CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD----DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ++|+..+.||+|+||.||+|.+.    +...||+|.++... .....++.+|+.++++++||||+++++++.+.+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            56888999999999999999874    24579999886543 33456789999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++++|.+++..  ....+++..+++++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++....
T Consensus        84 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          84 TEYMENGSLDKFLRE--NDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EEcCCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            999999999999864  234789999999999999999999998   999999999999999999999999999976542


Q ss_pred             CCc--cccccccccCccccccccCCcCc
Q 019842          306 QNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...  ......++..|+|||.+.++.++
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~  186 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAYRKFT  186 (266)
T ss_pred             cccceeccCCCCCccccChhhhccCCCc
Confidence            111  11122346789999999877654


No 128
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97  E-value=3.5e-29  Score=220.57  Aligned_cols=176  Identities=27%  Similarity=0.360  Sum_probs=151.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|...+.||+|++|.||+|... +++.|++|.+...  ......++.+|++++++++|||++++++++.+++..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4677889999999999999875 6889999988643  344567799999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... ....+++..++.++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence            9999999998753 245789999999999999999999998   999999999999999999999999999876554433


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......|++.|+|||++.++.++
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~  179 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYN  179 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCC
Confidence            33344688999999999887654


No 129
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.97  E-value=2.2e-29  Score=222.97  Aligned_cols=178  Identities=29%  Similarity=0.412  Sum_probs=150.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..++|+..+.||+|++|.||+|..++++.||+|.++... ...+++.+|++++++++|+||+++++++...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            356788899999999999999998888899999986543 2356789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++.... +..+++..+..++.|++.||.|||+.   +++||||||+||++++++.+||+|||++........
T Consensus        83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY  158 (261)
T ss_pred             ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence            99999999986532 45689999999999999999999999   999999999999999999999999999976543221


Q ss_pred             cc-cccccccCccccccccCCcCc
Q 019842          309 NN-LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~-~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .. .....+..|+|||++.++.++
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~  182 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYNRFS  182 (261)
T ss_pred             cccCCCcCceeccCccccccCCCC
Confidence            11 111234579999998876654


No 130
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97  E-value=2.5e-29  Score=225.33  Aligned_cols=178  Identities=31%  Similarity=0.503  Sum_probs=146.8

Q ss_pred             cCCcccceeeecccEEEEEEEe-----CCCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-----DDNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ++|+..+.||+|+||.||+|..     .++..|++|.+.... .....++.+|++++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577788999999999999974     346789999986433 3344678999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC
Q 019842          225 VYELMENRSLDIQLHGPS--------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF  290 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~  290 (335)
                      ||||+++++|.+++....              ....+++...+.++.|++.||+|||++   +++||||||+||++++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence            999999999999885321              123588999999999999999999999   999999999999999999


Q ss_pred             cEEEEcccCceeCCCCC--ccccccccccCccccccccCCcCc
Q 019842          291 NAKLSDFGLAITDGSQN--KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       291 ~~kl~Dfgla~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .+||+|||+++......  .......++..|+|||++.++.++
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  204 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFS  204 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCC
Confidence            99999999996543221  112223456789999999877654


No 131
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97  E-value=3.2e-29  Score=224.68  Aligned_cols=177  Identities=29%  Similarity=0.407  Sum_probs=146.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-----CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-----DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRF  223 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  223 (335)
                      ++|+..+.||+|+||.||++..+     ++..||+|++........+.+.+|++++++++||||+++++++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            46778899999999999999742     5789999999766666677899999999999999999999987543  4689


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +|+||+++|+|.+++..  ....+++..++.++.|+++||+|||+.   +++||||||+||++++++.+||+|||+++..
T Consensus        84 lv~e~~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQK--HRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            99999999999999863  234689999999999999999999999   9999999999999999999999999998754


Q ss_pred             CCCCcc---ccccccccCccccccccCCcCcc
Q 019842          304 GSQNKN---NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       304 ~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ......   .....++..|+|||++.++.++.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  190 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTESKFSV  190 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccCCcCh
Confidence            332211   11112345699999998776643


No 132
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.96  E-value=2e-29  Score=223.88  Aligned_cols=170  Identities=27%  Similarity=0.387  Sum_probs=148.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      ++|...+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46677888999999999999864 58899999987665555567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++..   ...+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.........
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06645          89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK  162 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence            99999998853   34689999999999999999999999   9999999999999999999999999998665433333


Q ss_pred             ccccccccCcccccccc
Q 019842          310 NLKLSGTLGYVAPEYLL  326 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~  326 (335)
                      .....|+..|+|||++.
T Consensus       163 ~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         163 RKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             cccccCcccccChhhhc
Confidence            33456899999999985


No 133
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96  E-value=5.2e-29  Score=223.73  Aligned_cols=175  Identities=28%  Similarity=0.365  Sum_probs=147.1

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      |...+.||+|+||+||+|... +++.||+|.+....   ......+.+|++++++++|+|++.+.+++..++..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            556788999999999999875 68899999986432   22345578899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... ....+++..+..++.|++.||.|||+.   +|+||||||+||++++++.+||+|||++........
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05632          82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES  157 (285)
T ss_pred             ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence            9999999887642 234699999999999999999999999   999999999999999999999999999865432222


Q ss_pred             cccccccccCccccccccCCcCcc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                       .....|+..|+|||++.++.++.
T Consensus       158 -~~~~~g~~~~~aPE~~~~~~~~~  180 (285)
T cd05632         158 -IRGRVGTVGYMAPEVLNNQRYTL  180 (285)
T ss_pred             -ccCCCCCcCccChHHhcCCCCCc
Confidence             12346899999999998776643


No 134
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96  E-value=3.4e-29  Score=222.29  Aligned_cols=178  Identities=28%  Similarity=0.379  Sum_probs=150.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||+|+.. +++.||+|.+...   .......+.+|++++++++||||+++++++.+.+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            47888999999999999999864 6889999987532   2344567899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          227 ELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       227 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||+++|+|.+++... .....+++..++.++.|+++||.|||++   +++||||+|+||++++++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            999999998877532 2234689999999999999999999999   999999999999999999999999999876543


Q ss_pred             CCccccccccccCccccccccCCcCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .........++..|+|||.+.+..++
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~~~  184 (267)
T cd08228         159 KTTAAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             hhHHHhcCCCCccccChhhhccCCCC
Confidence            33222234688899999999776553


No 135
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.96  E-value=5.3e-29  Score=223.70  Aligned_cols=175  Identities=29%  Similarity=0.373  Sum_probs=147.2

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      |+..+.||+|+||.||++... +++.||+|.+....   ......+.+|+.++++++|+|++++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            566788999999999999765 68899999986432   22235578899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... ....+++..+..++.|++.||.|||+.   +++||||||+||++++++.++|+|||++........
T Consensus        82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence            9999999888542 234589999999999999999999998   999999999999999999999999999865433222


Q ss_pred             cccccccccCccccccccCCcCcc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      . ....|+..|+|||++.++.++.
T Consensus       158 ~-~~~~g~~~y~aPE~~~~~~~~~  180 (285)
T cd05630         158 I-KGRVGTVGYMAPEVVKNERYTF  180 (285)
T ss_pred             c-cCCCCCccccChHHHcCCCCCC
Confidence            1 2346899999999998877653


No 136
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96  E-value=7.2e-32  Score=224.64  Aligned_cols=176  Identities=27%  Similarity=0.433  Sum_probs=150.1

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      +++|+..+.||+|.|+.||+... .+|+.+|+|.+...  +....+++.+|+.+-+.|+|||||+|.....+....|+|+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            45677788999999999999854 46888998887533  3446788999999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC---CcEEEEcccCceeC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK---FNAKLSDFGLAITD  303 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~---~~~kl~Dfgla~~~  303 (335)
                      |+|++++|..-+-.   ....++..+-..+.||+++|.|+|.+   +|||||+||+|+||...   --+||+|||+|...
T Consensus        90 e~m~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen   90 DLVTGGELFEDIVA---REFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             ecccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            99999999655532   24578888999999999999999999   99999999999999653   44999999999887


Q ss_pred             CCCCccccccccccCccccccccCCcCcc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      . .........||++|||||++...+|+.
T Consensus       164 ~-~g~~~~G~~GtP~fmaPEvvrkdpy~k  191 (355)
T KOG0033|consen  164 N-DGEAWHGFAGTPGYLSPEVLKKDPYSK  191 (355)
T ss_pred             C-CccccccccCCCcccCHHHhhcCCCCC
Confidence            7 444455678999999999999998874


No 137
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96  E-value=5.3e-29  Score=223.09  Aligned_cols=169  Identities=30%  Similarity=0.465  Sum_probs=146.1

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      |+..+.||+|+||.||+|... ++..+++|.+..........+.+|+++++.++|+|++++++++..++..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            455778999999999999876 4678899988766556667899999999999999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      ++|...+..  ....+++..+..++.|+++||.|||+.   +++||||||+||+++.++.+||+|||++...........
T Consensus        87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~  161 (282)
T cd06643          87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD  161 (282)
T ss_pred             CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence            999888753  235689999999999999999999999   999999999999999999999999999865443333333


Q ss_pred             ccccccCcccccccc
Q 019842          312 KLSGTLGYVAPEYLL  326 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~  326 (335)
                      ...++..|+|||++.
T Consensus       162 ~~~~~~~y~aPE~~~  176 (282)
T cd06643         162 SFIGTPYWMAPEVVM  176 (282)
T ss_pred             cccccccccCHhhcc
Confidence            456899999999985


No 138
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96  E-value=5.5e-29  Score=221.26  Aligned_cols=178  Identities=29%  Similarity=0.415  Sum_probs=150.2

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      +.+++++.....||+|+||.||+|... ++..|++|.+........+.+.+|+.++++++|+||+++++++..++..++|
T Consensus         4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624           4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence            445667777789999999999999854 5778999998766666677899999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEcccCcee
Q 019842          226 YELMENRSLDIQLHGPSHGSAL--TWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAIT  302 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~  302 (335)
                      +||+++++|.+++....  ..+  ++..+..++.|+++||+|||+.   +++||||||+||+++. ++.+||+|||++..
T Consensus        84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          84 MEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence            99999999999986422  334  7888999999999999999998   9999999999999986 67999999999865


Q ss_pred             CCCCCccccccccccCccccccccCCc
Q 019842          303 DGSQNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       303 ~~~~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ............++..|+|||++.++.
T Consensus       159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~  185 (268)
T cd06624         159 LAGINPCTETFTGTLQYMAPEVIDKGP  185 (268)
T ss_pred             cccCCCccccCCCCccccChhhhcccc
Confidence            443332223345789999999986654


No 139
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96  E-value=7.5e-29  Score=223.27  Aligned_cols=173  Identities=29%  Similarity=0.430  Sum_probs=149.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      +.|++.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++++++++|+||+++++++..++..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            56778899999999999999875 47899999997666666788999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|..++..  ....+++..+..++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++.........
T Consensus        92 ~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          92 PGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             CCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence            99999887753  234689999999999999999999998   9999999999999999999999999998654333332


Q ss_pred             ccccccccCccccccccCC
Q 019842          310 NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....++..|+|||++.++
T Consensus       167 ~~~~~~~~~y~aPE~~~~~  185 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCE  185 (292)
T ss_pred             cceecCCccccCceeeccc
Confidence            3344688999999998643


No 140
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96  E-value=2.4e-29  Score=225.01  Aligned_cols=174  Identities=32%  Similarity=0.452  Sum_probs=151.2

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .++|+..+.||+|++|.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++.+++..++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            456788889999999999999875 5889999998766666677899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..  ....+++..+..++.|++.||.|||+.   +++||||+|+||+++.++.++|+|||++........
T Consensus        84 ~~~~~L~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (280)
T cd06611          84 CDGGALDSIMLE--LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ  158 (280)
T ss_pred             cCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence            999999998863  234699999999999999999999999   999999999999999999999999999865443333


Q ss_pred             cccccccccCccccccccCC
Q 019842          309 NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......++..|+|||++..+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~  178 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVACE  178 (280)
T ss_pred             ccceeecchhhcCHHHHhhc
Confidence            33345689999999998643


No 141
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.96  E-value=6e-29  Score=222.80  Aligned_cols=174  Identities=30%  Similarity=0.481  Sum_probs=146.6

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|...+.||+|++|.||+|+.. ++..||+|++....  ......+.+|+.++++++||||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4677889999999999999875 68899999986432  22346788999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++ ++|.+++.....+..+++..+..++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence            97 68888876544446799999999999999999999999   999999999999999999999999999865543322


Q ss_pred             cccccccccCccccccccCCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ......+++.|+|||.+.+..
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~  177 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLGSP  177 (285)
T ss_pred             cccCCcccccccChHHhcCCC
Confidence            222335688999999986543


No 142
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.96  E-value=9.9e-29  Score=219.08  Aligned_cols=178  Identities=28%  Similarity=0.380  Sum_probs=152.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|++|.||+|... +++.||+|.++..   .......+.+|++++++++|+|++++++++.+++..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888999999999999999876 7899999988532   2334567899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          227 ELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       227 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||+++|+|.+++... .....+++..++.++.|+++||.|||+.   +++||||+|+||++++++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            999999999888542 2345689999999999999999999999   999999999999999999999999999876544


Q ss_pred             CCccccccccccCccccccccCCcCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .........++..|+|||.+.+..++
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~  184 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCC
Confidence            33333344688899999998776654


No 143
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96  E-value=3.4e-29  Score=225.19  Aligned_cols=182  Identities=27%  Similarity=0.402  Sum_probs=147.9

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD  220 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  220 (335)
                      ...++|++.+.||+|+||.||+|...      .+..||+|.+.... ......+.+|+.++++++|+||+++++++.+.+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            45678899999999999999999653      24579999886443 233456889999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHhHHhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEE
Q 019842          221 TRFIVYELMENRSLDIQLHGPS-------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAK  293 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~k  293 (335)
                      ..++||||+++|+|.+++....       .....++..+..++.|++.||.|||++   +++||||||+||++++++.+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence            9999999999999999986421       123457788899999999999999999   999999999999999999999


Q ss_pred             EEcccCceeCCCCCcc--ccccccccCccccccccCCcCcc
Q 019842          294 LSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       294 l~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      |+|||+++........  .....++..|+|||.+.++.++.
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~  200 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTT  200 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCCh
Confidence            9999998654332211  11223567899999998876653


No 144
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.96  E-value=4.2e-29  Score=220.75  Aligned_cols=176  Identities=27%  Similarity=0.371  Sum_probs=147.8

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      ++|...+.||+|+||.||+|+..++..+|+|.+..... ...++.+|+.++.+++||||+++++++.+.+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            35677889999999999999988777899999864432 34678999999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc-
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN-  309 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-  309 (335)
                      +|+|.+++...  ...+++..++.++.|++.||+|||+.   +++|+||||+||++++++.+||+|||+++........ 
T Consensus        83 ~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05113          83 NGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS  157 (256)
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence            99999998642  23689999999999999999999999   9999999999999999999999999998654332211 


Q ss_pred             ccccccccCccccccccCCcCcc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .....++..|+|||++.++.++.
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~  180 (256)
T cd05113         158 SVGSKFPVRWSPPEVLLYSKFSS  180 (256)
T ss_pred             cCCCccChhhCCHHHHhcCcccc
Confidence            11223567899999998766543


No 145
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96  E-value=4.8e-29  Score=223.33  Aligned_cols=179  Identities=33%  Similarity=0.519  Sum_probs=148.1

Q ss_pred             cCCcccceeeecccEEEEEEEeCC------CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD------NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  223 (335)
                      ++|+..+.||+|+||.||+|...+      ...|++|.+.... .....++.+|++++++++||||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            467788999999999999997643      2579999986443 334567899999999999999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC
Q 019842          224 IVYELMENRSLDIQLHGPSH-------------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF  290 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~  290 (335)
                      ++|||+++|+|.+++.....             ...+++..++.++.|++.||.|||+.   +++||||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence            99999999999998864211             14588999999999999999999999   999999999999999999


Q ss_pred             cEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCcc
Q 019842          291 NAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       291 ~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .+||+|||+++.......  ......+++.|+|||++.++.++.
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  205 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTT  205 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCch
Confidence            999999999865433221  122234678899999998877653


No 146
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96  E-value=3.4e-29  Score=223.84  Aligned_cols=179  Identities=29%  Similarity=0.443  Sum_probs=149.6

Q ss_pred             cCCcccceeeecccEEEEEEEeC------CCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  223 (335)
                      ++|...+.||+|+||.||+|...      ++..||+|.+...... ..+.+.+|++++++++|+||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            45777889999999999999763      3478999998765444 4578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcE
Q 019842          224 IVYELMENRSLDIQLHGPS-----------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNA  292 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~  292 (335)
                      +||||+++++|.+++....           ....+++..+..++.|++.||+|||++   +++||||||+||++++++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence            9999999999999986421           234588999999999999999999999   99999999999999999999


Q ss_pred             EEEcccCceeCCCCCc--cccccccccCccccccccCCcCcc
Q 019842          293 KLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       293 kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ||+|||+++.......  ......++..|+|||++.++.++.
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTT  203 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcch
Confidence            9999999865432211  112234577899999998887754


No 147
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.96  E-value=5.2e-29  Score=223.94  Aligned_cols=179  Identities=28%  Similarity=0.446  Sum_probs=149.5

Q ss_pred             cCCcccceeeecccEEEEEEEe------CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL------DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ++|...+.||+|+||.||++..      .++..+|+|.+..........+.+|++++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            5678889999999999999974      2345689999876666667789999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          225 VYELMENRSLDIQLHGPS----------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                      ||||+++++|.+++....          ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence            999999999999886321          223589999999999999999999999   9999999999999999999999


Q ss_pred             EcccCceeCCCCCc--cccccccccCccccccccCCcCcc
Q 019842          295 SDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       295 ~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      +|||+++.......  ......++..|+|||++.+..++.
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  201 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTT  201 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCc
Confidence            99999865432221  111223577899999998776653


No 148
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.96  E-value=2.4e-29  Score=223.47  Aligned_cols=145  Identities=28%  Similarity=0.354  Sum_probs=131.2

Q ss_pred             CCcccceeeecccEEEEEEEeCC-CceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .|+..+.||.|.-|+||++++.+ +..+|+|+++..   ......+.+.|-+||+.++||.+..||+.++.++..+++||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            45557789999999999999875 588999999754   34455678899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ||+||+|...++. +.+..+++..+..++.+|+-||+|||-.   |||+|||||+||||.++|.+-|+||.|+
T Consensus       158 yCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS  226 (459)
T KOG0610|consen  158 YCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLS  226 (459)
T ss_pred             cCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccc
Confidence            9999999988876 4567899999999999999999999999   9999999999999999999999999986


No 149
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.7e-30  Score=230.08  Aligned_cols=176  Identities=30%  Similarity=0.416  Sum_probs=152.2

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      +.|..-++||+||||.||-++. .+|+.+|.|++...   ........++|-.+|.+++.+.||.+--.++..+.+++|+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            5677788999999999998865 46889999988533   2334566789999999999999999988899999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ..|++|+|.-++.... +..+++..+..++.+|+.||++||..   +||+||+||+|||||+.|.++|+|+|||......
T Consensus       265 tlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            9999999998886532 35699999999999999999999999   9999999999999999999999999999877554


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .... ..+||.+|||||++.+++|+
T Consensus       341 ~~~~-~rvGT~GYMAPEvl~ne~Y~  364 (591)
T KOG0986|consen  341 KPIR-GRVGTVGYMAPEVLQNEVYD  364 (591)
T ss_pred             Cccc-cccCcccccCHHHHcCCccc
Confidence            4433 34799999999999999975


No 150
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96  E-value=1.3e-28  Score=220.37  Aligned_cols=169  Identities=29%  Similarity=0.425  Sum_probs=145.1

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..++||+|+||.||+|.. .+++.||+|.+... ......++.+|++++++++||||+++++++..++..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3677788999999999999976 46889999998644 334456799999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|..+.       .+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||++........
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~  150 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA  150 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc
Confidence            9999996542       468889999999999999999999   999999999999999999999999999966543222


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ....++..|+|||++.++.++
T Consensus       151 --~~~~~~~~y~aPE~~~~~~~~  171 (279)
T cd06619         151 --KTYVGTNAYMAPERISGEQYG  171 (279)
T ss_pred             --cCCCCChhhcCceeecCCCCC
Confidence              234689999999999877654


No 151
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.96  E-value=7.6e-29  Score=224.00  Aligned_cols=175  Identities=26%  Similarity=0.389  Sum_probs=152.3

Q ss_pred             hcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..+|...+.||+|++|.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            36788899999999999999986 47899999999766555667789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..    ..+++..+..++.|++.||.|||+.   +++||||||+||++++++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             cCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            999999998853    3588999999999999999999999   999999999999999999999999999866543333


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......+++.|+|||.+.++.++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~  193 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAYG  193 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCCC
Confidence            22334688899999999877654


No 152
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96  E-value=8.8e-29  Score=224.72  Aligned_cols=174  Identities=30%  Similarity=0.381  Sum_probs=147.6

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||+|+||.||++... ++..+|+|.+.... .....++.+|++++++++||||+++++++.+++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            46888999999999999999865 57788889886542 33446688999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..   ...+++..+..++.|+++||.|||+.+  +++||||||+|||+++++.+||+|||++....... 
T Consensus        81 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  154 (308)
T cd06615          81 MDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-  154 (308)
T ss_pred             cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence            999999999853   356899999999999999999999732  89999999999999999999999999986543221 


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       .....++..|+|||.+.+..++
T Consensus       155 -~~~~~~~~~~~aPE~~~~~~~~  176 (308)
T cd06615         155 -ANSFVGTRSYMSPERLQGTHYT  176 (308)
T ss_pred             -cccCCCCcCccChhHhcCCCCC
Confidence             1234688999999998776554


No 153
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.96  E-value=1.4e-28  Score=216.94  Aligned_cols=176  Identities=26%  Similarity=0.362  Sum_probs=150.0

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      +|+..+.||+|+||.||++... ++..+++|.++.. .....+.+.+|+.++++++|+||+++++++.+++..+++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4677899999999999999865 6889999988543 3345567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++.. .....+++...+.++.|++.||.|||++   +++|+||||+||++++++.++++|||++.........
T Consensus        81 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          81 DGGDLMQKIKL-QRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             CCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence            99999988754 2345689999999999999999999999   9999999999999999999999999998765443333


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||++.+..++
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~  178 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPYN  178 (255)
T ss_pred             cccccCCccccCHHHHccCCcC
Confidence            3345688999999998776554


No 154
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.96  E-value=6.5e-29  Score=219.81  Aligned_cols=177  Identities=28%  Similarity=0.446  Sum_probs=148.9

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..++|+..+.||+|+||.||+|...+++.||+|.+..... ...++.+|++++++++|+|++++++++. .+..+++|||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence            4567888999999999999999988899999999875433 3467899999999999999999999874 4678999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... .+..+++..++.++.|++.||+|||+.   +++||||||+||++++++.++|+|||++........
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05067          82 MENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY  157 (260)
T ss_pred             CCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence            9999999988642 345789999999999999999999998   999999999999999999999999999866542221


Q ss_pred             -cccccccccCccccccccCCcCc
Q 019842          309 -NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 -~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       ......++..|+|||++..+.++
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~  181 (260)
T cd05067         158 TAREGAKFPIKWTAPEAINYGTFT  181 (260)
T ss_pred             ccccCCcccccccCHHHhccCCcC
Confidence             11223456789999998777654


No 155
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.96  E-value=8.3e-29  Score=223.64  Aligned_cols=173  Identities=26%  Similarity=0.383  Sum_probs=150.1

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .+|...+.||+|++|.||+|.. .+++.|++|.+..........+.+|+.+++.++|+||+++++.+..++..++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            4778888999999999999985 468899999997665556677899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++..    ..+++.++..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++.........
T Consensus       100 ~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  172 (296)
T cd06654         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (296)
T ss_pred             CCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence            99999998853    3588999999999999999999999   9999999999999999999999999998654333222


Q ss_pred             ccccccccCccccccccCCcC
Q 019842          310 NLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      .....+++.|+|||.+.++.+
T Consensus       173 ~~~~~~~~~y~aPE~~~~~~~  193 (296)
T cd06654         173 RSTMVGTPYWMAPEVVTRKAY  193 (296)
T ss_pred             cCcccCCccccCHHHHcCCCC
Confidence            233468899999999887654


No 156
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=6e-29  Score=236.34  Aligned_cols=169  Identities=25%  Similarity=0.304  Sum_probs=143.4

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      ..|.+.+.||+|+||.||+|... +++.||+|...      ...+.+|++++++++|+||+++++++..++..++|||++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            46888899999999999999875 47889999642      234678999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc-
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK-  308 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-  308 (335)
                      . ++|..++..  ....+++..++.++.|+++||.|||++   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus       243 ~-~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        243 R-SDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             C-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence            5 788887753  234699999999999999999999999   999999999999999999999999999975432211 


Q ss_pred             -cccccccccCccccccccCCcCc
Q 019842          309 -NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 -~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       ......||..|+|||++.++.++
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~~~~  340 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGDPYT  340 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCCCCC
Confidence             12234699999999999887765


No 157
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96  E-value=1e-28  Score=222.29  Aligned_cols=172  Identities=32%  Similarity=0.418  Sum_probs=149.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|++|.||++... +++.||+|.+...   .......+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46788899999999999999875 5889999998543   2234567889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++++|.+++..   ...+++..+..++.|+++||.|||+.   +++||||+|+||++++++.+||+|||++......
T Consensus        81 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            99999999999853   35689999999999999999999998   9999999999999999999999999998765433


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                         .....+++.|+|||.+.++..+
T Consensus       155 ---~~~~~~~~~y~aPE~~~~~~~~  176 (290)
T cd05580         155 ---TYTLCGTPEYLAPEIILSKGYG  176 (290)
T ss_pred             ---CCCCCCCccccChhhhcCCCCC
Confidence               2234688999999999877654


No 158
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.96  E-value=7.8e-29  Score=220.23  Aligned_cols=176  Identities=29%  Similarity=0.454  Sum_probs=146.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC----CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD----DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ++|+..+.||+|+||.||+|...    ++..+|+|.++... ......+.+|+.++++++||||+++++++.+++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            46778899999999999999763    23479999886543 33456789999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++++|.+++..  ....+++.+++.++.|++.||.|||+.   +++||||||+||++++++.+||+|||++.....
T Consensus        84 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          84 TEYMENGSLDAFLRK--HDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            999999999999864  235689999999999999999999999   999999999999999999999999999876543


Q ss_pred             CCccc---cccccccCccccccccCCcCc
Q 019842          306 QNKNN---LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~---~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....   ....++..|+|||++.++.++
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  187 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFT  187 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhccCccC
Confidence            22111   112235689999999876654


No 159
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96  E-value=8.5e-29  Score=218.65  Aligned_cols=174  Identities=27%  Similarity=0.359  Sum_probs=146.2

Q ss_pred             CCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          152 SFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +|...+.||+|+||.||+|...++..+|+|.+..... ...++.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            4677889999999999999988777899998864322 335688899999999999999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc-
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN-  310 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-  310 (335)
                      ++|.+++...  ...+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++......... 
T Consensus        84 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~  158 (256)
T cd05059          84 GCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS  158 (256)
T ss_pred             CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence            9999998642  34689999999999999999999999   99999999999999999999999999987654322111 


Q ss_pred             cccccccCccccccccCCcCc
Q 019842          311 LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....++..|+|||.+.++.++
T Consensus       159 ~~~~~~~~y~~Pe~~~~~~~~  179 (256)
T cd05059         159 QGTKFPVKWAPPEVFDYSRFS  179 (256)
T ss_pred             CCCCCCccccCHHHhccCCCC
Confidence            111234579999999877665


No 160
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96  E-value=7.2e-29  Score=231.21  Aligned_cols=171  Identities=28%  Similarity=0.406  Sum_probs=143.2

Q ss_pred             CCcccceeeecccEEEEEEEe-CCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eEE
Q 019842          152 SFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TRF  223 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  223 (335)
                      +|+..+.||+|+||.||+|.. .+++.||+|++...  .....+++.+|+++++.++|+||+++++++...+     ..|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999986 46899999998643  2334567899999999999999999999998876     789


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +|+||+. ++|.+.+..   ...+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|||+++..
T Consensus        81 lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999997 577777642   35689999999999999999999999   9999999999999999999999999999764


Q ss_pred             CCCC-ccccccccccCccccccccCCc
Q 019842          304 GSQN-KNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       304 ~~~~-~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .... .......++..|+|||++.+..
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~  180 (372)
T cd07853         154 EPDESKHMTQEVVTQYYRAPEILMGSR  180 (372)
T ss_pred             ccCccccCCCCCcCCCcCCHHHHcCCC
Confidence            3222 1222335788999999987743


No 161
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96  E-value=3.2e-29  Score=230.45  Aligned_cols=181  Identities=30%  Similarity=0.391  Sum_probs=146.2

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC-
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD-  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-  219 (335)
                      ..++|+..+.||+|+||.||+|...      +++.||+|++.... ....+.+.+|++++.++ +|+||++++++|... 
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            3457888999999999999999642      34789999986543 33446688999999999 899999999988754 


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCC--------------------------------------------------------
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSH--------------------------------------------------------  243 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------------------  243 (335)
                      ...++++||+++++|.+++.....                                                        
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            578899999999999988853211                                                        


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--cccccccccCc
Q 019842          244 --GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGY  319 (335)
Q Consensus       244 --~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y  319 (335)
                        ...+++..+..++.||++||+|||+.   +|+||||||+||++++++.+||+|||+++.......  ......++..|
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y  241 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  241 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence              13689999999999999999999999   999999999999999999999999999965432211  12223456789


Q ss_pred             cccccccCCcCcc
Q 019842          320 VAPEYLLDGMVGK  332 (335)
Q Consensus       320 ~aPE~l~~~~~~~  332 (335)
                      +|||++.++.+++
T Consensus       242 ~aPE~~~~~~~~~  254 (337)
T cd05054         242 MAPESIFDKVYTT  254 (337)
T ss_pred             cCcHHhcCCCCCc
Confidence            9999998877653


No 162
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96  E-value=9.9e-29  Score=219.21  Aligned_cols=163  Identities=29%  Similarity=0.428  Sum_probs=137.0

Q ss_pred             ceeeecccEEEEEEEeCC-------------CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEE
Q 019842          157 NILGEGGFGCVYKAKLDD-------------NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  223 (335)
                      +.||+|+||.||+|.+.+             ...|++|.+..........+.+|+.+++.++||||+++++++.++...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999997532             2358889887655555667899999999999999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc-------EEEEc
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN-------AKLSD  296 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~-------~kl~D  296 (335)
                      +||||+++|+|..++..  ....+++..++.++.|+++||+|||+.   +++||||||+|||+++++.       +|++|
T Consensus        81 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             EEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            99999999999988763  335689999999999999999999999   9999999999999987664       89999


Q ss_pred             ccCceeCCCCCccccccccccCccccccccCC
Q 019842          297 FGLAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       297 fgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ||++.......    ...++..|+|||.+.++
T Consensus       156 ~g~~~~~~~~~----~~~~~~~y~aPE~~~~~  183 (262)
T cd05077         156 PGIPITVLSRQ----ECVERIPWIAPECVEDS  183 (262)
T ss_pred             CCCCccccCcc----cccccccccChhhhcCC
Confidence            99986543221    23578899999998743


No 163
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.96  E-value=1e-28  Score=217.37  Aligned_cols=170  Identities=31%  Similarity=0.452  Sum_probs=141.6

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      +.||+|+||.||+|... +++.||+|.+... ..+....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            36999999999999874 6889999987643 334456799999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc--cc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN--LK  312 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~~  312 (335)
                      .+++..  ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+||+|||++..........  ..
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  155 (252)
T cd05084          81 LTFLRT--EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM  155 (252)
T ss_pred             HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence            999863  234689999999999999999999999   99999999999999999999999999986543221111  11


Q ss_pred             cccccCccccccccCCcCc
Q 019842          313 LSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       313 ~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...+..|+|||.+.++.++
T Consensus       156 ~~~~~~y~aPE~~~~~~~~  174 (252)
T cd05084         156 KQIPVKWTAPEALNYGRYS  174 (252)
T ss_pred             CCCceeecCchhhcCCCCC
Confidence            1234579999999877654


No 164
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.96  E-value=7.1e-29  Score=232.73  Aligned_cols=184  Identities=27%  Similarity=0.394  Sum_probs=149.1

Q ss_pred             HHHHhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCC-CCceeEEeeEEE
Q 019842          146 LEKATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIH-HPNVVCLLGYSA  217 (335)
Q Consensus       146 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~  217 (335)
                      ++...++|...+.||+|+||.||+|++.      .+..||+|+++... ....+.+.+|++++.++. ||||++++|+|.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            3444566778899999999999999863      34689999997543 233457899999999997 999999999999


Q ss_pred             eCCeEEEEEEecCCCCHhHHhcCCC-------------------------------------------------------
Q 019842          218 HDDTRFIVYELMENRSLDIQLHGPS-------------------------------------------------------  242 (335)
Q Consensus       218 ~~~~~~lv~E~~~~g~L~~~l~~~~-------------------------------------------------------  242 (335)
                      ..+..++|+||+++|+|.++++...                                                       
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            9999999999999999999886421                                                       


Q ss_pred             ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 019842          243 ----------------------------------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSS  282 (335)
Q Consensus       243 ----------------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~  282 (335)
                                                              ....+++...+.++.|++.||+|||+.   +++||||||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~  268 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR  268 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence                                                    112467888999999999999999998   9999999999


Q ss_pred             CEEEcCCCcEEEEcccCceeCCCCC--ccccccccccCccccccccCCcCcc
Q 019842          283 NILLDSKFNAKLSDFGLAITDGSQN--KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       283 Nill~~~~~~kl~Dfgla~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      |||+++++.+||+|||+++......  .......++..|+|||.+.++.++.
T Consensus       269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  320 (401)
T cd05107         269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTT  320 (401)
T ss_pred             eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCc
Confidence            9999999999999999996543211  1112234678899999998776643


No 165
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.96  E-value=8e-29  Score=219.24  Aligned_cols=176  Identities=30%  Similarity=0.418  Sum_probs=146.9

Q ss_pred             hcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .++|+..+.||+|+||.||+|..+++..+|+|.+..... ....+.+|++++++++|+|++++++++.+ +..+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence            457788899999999999999988888899999865433 34578999999999999999999998854 5689999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++... ....+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||++.........
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05070          83 SKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence            999999998642 234589999999999999999999999   9999999999999999999999999999665332211


Q ss_pred             -ccccccccCccccccccCCcCc
Q 019842          310 -NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 -~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       .....++..|+|||++.+++++
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~  181 (260)
T cd05070         159 ARQGAKFPIKWTAPEAALYGRFT  181 (260)
T ss_pred             cccCCCCCccccChHHHhcCCCc
Confidence             1122356689999998777654


No 166
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96  E-value=9.2e-29  Score=218.77  Aligned_cols=178  Identities=28%  Similarity=0.391  Sum_probs=151.2

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..++|...+.||+|+||.||+|..++++.|++|.+.... ....++.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            457888899999999999999998888899999987443 2346789999999999999999999999998999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... ....+++..+..++.|++.||+|||++   +++||||+|+||++++++.+||+|||++........
T Consensus        83 ~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (261)
T cd05034          83 MSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY  158 (261)
T ss_pred             cCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence            9999999998652 235689999999999999999999999   999999999999999999999999999866543211


Q ss_pred             -cccccccccCccccccccCCcCc
Q 019842          309 -NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 -~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       ......++..|+|||.+.++.++
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~~  182 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRFT  182 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCcC
Confidence             11122345689999999877665


No 167
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.96  E-value=1.5e-28  Score=216.84  Aligned_cols=173  Identities=31%  Similarity=0.471  Sum_probs=148.7

Q ss_pred             hcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .++|+..+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            356788899999999999999875 78899999975544 5677999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++... ....+++..+..++.|++.||.|||+.   +++||||||+||++++++.+||+|||.++....... 
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-  157 (256)
T cd05039          83 AKGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-  157 (256)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence            999999998642 223689999999999999999999999   999999999999999999999999999876532222 


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ....+..|+|||++.++.++
T Consensus       158 --~~~~~~~~~ape~~~~~~~~  177 (256)
T cd05039         158 --SGKLPVKWTAPEALREKKFS  177 (256)
T ss_pred             --cCCCcccccCchhhcCCcCC
Confidence              22346789999999877654


No 168
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96  E-value=8.1e-29  Score=235.46  Aligned_cols=171  Identities=27%  Similarity=0.410  Sum_probs=137.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--------
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--------  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------  219 (335)
                      ...+|...+.||+|+||.||+|... +++.||+|++....    ....+|+.+++.++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3467999999999999999999874 68899999885332    2345799999999999999999886432        


Q ss_pred             CeEEEEEEecCCCCHhHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-cEEEEcc
Q 019842          220 DTRFIVYELMENRSLDIQLHG-PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-NAKLSDF  297 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Df  297 (335)
                      ...++||||+++ +|.+++.. ......+++..+..++.|++.||+|||+.   +|+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence            246799999985 66555532 23446799999999999999999999999   999999999999999664 7999999


Q ss_pred             cCceeCCCCCccccccccccCccccccccCC
Q 019842          298 GLAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       298 gla~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      |+|+....... .....||+.|+|||++.+.
T Consensus       216 Gla~~~~~~~~-~~~~~~t~~y~aPE~~~~~  245 (440)
T PTZ00036        216 GSAKNLLAGQR-SVSYICSRFYRAPELMLGA  245 (440)
T ss_pred             ccchhccCCCC-cccCCCCcCccCHHHhcCC
Confidence            99976533222 2234689999999998764


No 169
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=8.9e-31  Score=242.74  Aligned_cols=172  Identities=28%  Similarity=0.447  Sum_probs=150.0

Q ss_pred             cccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          154 HESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      .+..-||.|+||.||+|..++ +...|.|.+...+.+...+|+-||++|+..+||+||+|++.|+..+.+|+..|||.||
T Consensus        35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG  114 (1187)
T KOG0579|consen   35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG  114 (1187)
T ss_pred             HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence            345669999999999998765 4455778888778888899999999999999999999999999999999999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccc
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLK  312 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  312 (335)
                      -.+..+.  .-+..|++.++..++.|++.||.|||++   .|||||||+.|||++-+|.++|+|||.+-..........+
T Consensus       115 AVDaiml--EL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs  189 (1187)
T KOG0579|consen  115 AVDAIML--ELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS  189 (1187)
T ss_pred             hHhHHHH--HhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence            9987765  3456799999999999999999999999   9999999999999999999999999987554444444456


Q ss_pred             cccccCccccccccCCcC
Q 019842          313 LSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       313 ~~gt~~y~aPE~l~~~~~  330 (335)
                      +.||+.|||||+++...+
T Consensus       190 FIGTPYWMAPEVvmCET~  207 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETF  207 (1187)
T ss_pred             ccCCcccccchheeeccc
Confidence            789999999999876544


No 170
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96  E-value=7.3e-30  Score=203.67  Aligned_cols=173  Identities=28%  Similarity=0.422  Sum_probs=146.5

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|...+.||+|.||+||+|+.. +++.||+|+++...  +..-....+|+.+++.++|+|||+++++...++.+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            3445667999999999999864 57889999886443  33346688999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      |+ .+|..+..+  -++.++.+.+..++.|+++||.|+|++   ++.|||+||.|.||+.||+.|++|||+++-++-...
T Consensus        83 cd-qdlkkyfds--lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvr  156 (292)
T KOG0662|consen   83 CD-QDLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR  156 (292)
T ss_pred             hh-HHHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence            96 577777653  356799999999999999999999999   999999999999999999999999999988765543


Q ss_pred             cccccccccCccccccccCCcC
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ....-..|.+|.+|.++.+.+.
T Consensus       157 cysaevvtlwyrppdvlfgakl  178 (292)
T KOG0662|consen  157 CYSAEVVTLWYRPPDVLFGAKL  178 (292)
T ss_pred             eeeceeeeeeccCcceeeeeeh
Confidence            3333457999999999988754


No 171
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96  E-value=6.3e-29  Score=219.34  Aligned_cols=172  Identities=36%  Similarity=0.520  Sum_probs=146.2

Q ss_pred             CcccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHH--HHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          153 FHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGR--EFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      |+..+.||+|+||+||+++... ++.+|+|.+.........  ...+|+.++++++||||+++++++.+.+..++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            5567899999999999998764 568999999765443332  3456999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++.   ....+++..++.++.|+++||+|||+.   +++||||||+||++++++.++|+|||.+.........
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~  154 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN  154 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred             cccccccccc---ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            9999999986   345689999999999999999999999   9999999999999999999999999999764333333


Q ss_pred             ccccccccCcccccccc-CCcC
Q 019842          310 NLKLSGTLGYVAPEYLL-DGMV  330 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~-~~~~  330 (335)
                      .....++..|+|||++. +..+
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~  176 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQQGKKY  176 (260)
T ss_dssp             BSSSSSSGGGSCHHHHTTTSSB
T ss_pred             cccccccccccccccccccccc
Confidence            33457899999999987 4443


No 172
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.96  E-value=1.6e-28  Score=221.88  Aligned_cols=174  Identities=26%  Similarity=0.409  Sum_probs=151.4

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .+|+..+.||.|++|.||+|.. .+++.|++|.+..........+.+|+++++.++|+|++++++++...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4688889999999999999975 568899999997655556678899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|..++..    ..+++.++..++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++.........
T Consensus        99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  171 (296)
T cd06655          99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK  171 (296)
T ss_pred             CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence            99999998853    3589999999999999999999999   9999999999999999999999999998655433332


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||.+.++.++
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~  193 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTRKAYG  193 (296)
T ss_pred             CCCcCCCccccCcchhcCCCCC
Confidence            2334688899999999877653


No 173
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.96  E-value=1.9e-28  Score=215.45  Aligned_cols=170  Identities=31%  Similarity=0.446  Sum_probs=143.5

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHh
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLD  235 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~  235 (335)
                      ++||+|+||.||+|...++..+|+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36999999999999988889999999865433 33456889999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc-cccc
Q 019842          236 IQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN-LKLS  314 (335)
Q Consensus       236 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~~~  314 (335)
                      +++..  ....+++..++.++.|++.||.|||++   +++||||+|+||++++++.+||+|||++.......... ....
T Consensus        81 ~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (250)
T cd05085          81 SFLRK--KKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ  155 (250)
T ss_pred             HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence            98864  234689999999999999999999999   99999999999999999999999999986543322111 1123


Q ss_pred             cccCccccccccCCcCc
Q 019842          315 GTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~~  331 (335)
                      ++..|+|||++.++.++
T Consensus       156 ~~~~y~aPE~~~~~~~~  172 (250)
T cd05085         156 IPIKWTAPEALNYGRYS  172 (250)
T ss_pred             CcccccCHHHhccCCCC
Confidence            45689999999877654


No 174
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96  E-value=1.6e-28  Score=217.14  Aligned_cols=174  Identities=29%  Similarity=0.402  Sum_probs=151.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .++|+..+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++||||+++++++.+.+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            357888999999999999999874 5778999999766555678899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..  ....+++..+..++.|++.||+|||++   +++||||+|+||++++++.+||+|||++........
T Consensus        82 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          82 CGGGSLQDIYQV--TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             CCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            999999998863  235689999999999999999999998   999999999999999999999999999865543322


Q ss_pred             cccccccccCccccccccCC
Q 019842          309 NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......++..|+|||.+.+.
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~  176 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVE  176 (262)
T ss_pred             ccccccCCccccCchhhccc
Confidence            22344678899999998766


No 175
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96  E-value=1.4e-28  Score=220.16  Aligned_cols=175  Identities=26%  Similarity=0.344  Sum_probs=142.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCc----eEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNL----HVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ++|+..+.||+|+||.||+|.+. ++.    .+++|.+.... .....++..|+..+++++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            46777899999999999999864 343    47788775432 2344678889999999999999999999864 45788


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ++||+++|+|.+++..  ....+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++...
T Consensus        86 i~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          86 VTQLSPLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEeCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            9999999999999864  235689999999999999999999998   99999999999999999999999999997543


Q ss_pred             CCCc--cccccccccCccccccccCCcCc
Q 019842          305 SQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....  ......++..|+|||++.++.++
T Consensus       161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  189 (279)
T cd05111         161 PDDKKYFYSEHKTPIKWMALESILFGRYT  189 (279)
T ss_pred             CCCcccccCCCCCcccccCHHHhccCCcC
Confidence            2221  12233467789999999887764


No 176
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96  E-value=2.1e-28  Score=219.30  Aligned_cols=172  Identities=27%  Similarity=0.416  Sum_probs=146.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|+..+.||+|++|.||+|+.. +++.||+|++....  ....+.+.+|++++++++|+|++++++++..++..++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46788899999999999999876 58899999885432  2234568899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|......   ...+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence            9999988877642   34689999999999999999999998   99999999999999999999999999997654433


Q ss_pred             ccccccccccCccccccccCC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .......++..|+|||++.++
T Consensus       155 ~~~~~~~~~~~~~aPE~~~~~  175 (286)
T cd07847         155 DDYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             ccccCcccccccCCHHHHhCC
Confidence            222334578899999998763


No 177
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96  E-value=1.4e-28  Score=228.19  Aligned_cols=173  Identities=30%  Similarity=0.366  Sum_probs=143.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----  220 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----  220 (335)
                      ..++|+..+.||+|+||.||++... ++..||+|++...  .......+.+|+.+++.++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            3578999999999999999999864 5889999998643  3344567889999999999999999999986543     


Q ss_pred             -eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          221 -TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       221 -~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                       ..++||||+++ +|...++     ..+++..+..++.|+++||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence             57999999975 5555553     2478889999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCCcCc
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++...... ......||..|+|||++.+..++
T Consensus       170 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~  200 (359)
T cd07876         170 ARTACTNF-MMTPYVVTRYYRAPEVILGMGYK  200 (359)
T ss_pred             ccccccCc-cCCCCcccCCCCCchhccCCCCC
Confidence            96543322 22234689999999999887664


No 178
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96  E-value=7.6e-29  Score=219.81  Aligned_cols=176  Identities=27%  Similarity=0.373  Sum_probs=147.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .+|...+.||+|++|.||+|... +++.|++|.+... .....++.+|++++++++|+||+++++++..++..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            45777889999999999999865 5788999998643 334567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++... ....+++..++.++.|+++||+|||++   +++||||||+||++++++.+||+|||++.........
T Consensus        85 ~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          85 TYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             CCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            999999988642 345689999999999999999999999   9999999999999999999999999998655432211


Q ss_pred             c-cccccccCccccccccCCcCc
Q 019842          310 N-LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~-~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      . ....++..|+|||.+.++.++
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~  183 (263)
T cd05052         161 AHAGAKFPIKWTAPESLAYNKFS  183 (263)
T ss_pred             ccCCCCCccccCCHHHhccCCCC
Confidence            1 112245689999999877664


No 179
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96  E-value=2.6e-28  Score=216.06  Aligned_cols=175  Identities=31%  Similarity=0.443  Sum_probs=147.8

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-----chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-----QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ++|+..+.||+|++|.||+|... +++.|++|.+....     ....+.+.+|++++++++||||+++++++.+++..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46888999999999999999864 68899999885432     1234568899999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      |+||+++++|.+.+..   ...+++..+..++.|++.||.|||+.   +++||||+|+||++++++.++|+|||+++...
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            9999999999988853   34688999999999999999999999   99999999999999999999999999986543


Q ss_pred             CCCccc---cccccccCccccccccCCcCc
Q 019842          305 SQNKNN---LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~~~---~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......   ....++..|+|||++.+..++
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (263)
T cd06625         156 TICSSGTGMKSVTGTPYWMSPEVISGEGYG  185 (263)
T ss_pred             ccccccccccCCCcCccccCcceeccCCCC
Confidence            221111   234578899999999887654


No 180
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96  E-value=1e-28  Score=220.62  Aligned_cols=162  Identities=27%  Similarity=0.407  Sum_probs=134.8

Q ss_pred             eeeecccEEEEEEEeCC-------------------------CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEE
Q 019842          158 ILGEGGFGCVYKAKLDD-------------------------NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCL  212 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l  212 (335)
                      .||+|+||.||+|.+..                         ...|++|.+.........++.+|++++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            59999999999997421                         13588998875555555678899999999999999999


Q ss_pred             eeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC--
Q 019842          213 LGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF--  290 (335)
Q Consensus       213 ~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~--  290 (335)
                      +++|.+.+..++||||+++|+|..++..  ....+++..++.++.|+++||+|||+.   +++||||||+|||+++++  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcc
Confidence            9999999999999999999999988853  245689999999999999999999998   999999999999997654  


Q ss_pred             -----cEEEEcccCceeCCCCCccccccccccCccccccccCC
Q 019842          291 -----NAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       291 -----~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                           .+|++|||++.......    ...++..|+|||.+.++
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~~----~~~~~~~~~aPe~~~~~  195 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSRE----ERVERIPWIAPECVPGG  195 (274)
T ss_pred             cCccceeeecCCcccccccccc----ccccCCcccCchhhcCC
Confidence                 38999999875432221    22467889999998764


No 181
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.96  E-value=8.3e-29  Score=219.80  Aligned_cols=178  Identities=28%  Similarity=0.381  Sum_probs=150.2

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|++|.||+|.. .++..+++|.+...   ......++.+|+.+++.++|+||+++++++.+++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4677788999999999999986 47889999987543   2334467899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          227 ELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       227 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||+++++|.+++... .....+++..++.++.|+++||.|||++   +++|+||+|+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            999999999887532 2345689999999999999999999999   999999999999999999999999999866543


Q ss_pred             CCccccccccccCccccccccCCcCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .........++..|+|||.+.+..++
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~  184 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYN  184 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCcc
Confidence            33222334688999999999776654


No 182
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.96  E-value=1.3e-28  Score=218.40  Aligned_cols=176  Identities=28%  Similarity=0.406  Sum_probs=146.2

Q ss_pred             hcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .++|...+.||+|+||.||+|+.+++..||+|.+..... ...++.+|++++++++|+||+++++++.+ +..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence            356888999999999999999887777899999874332 34578999999999999999999998754 5679999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++|+|.+++... ....+++..++.++.|+++||+|||+.   +++||||||+||++++++.+||+|||+++........
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~  158 (262)
T cd05071          83 SKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  158 (262)
T ss_pred             CCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence            999999998642 234689999999999999999999999   9999999999999999999999999999655432221


Q ss_pred             -ccccccccCccccccccCCcCc
Q 019842          310 -NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 -~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       .....++..|+|||++.++.++
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~  181 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALYGRFT  181 (262)
T ss_pred             cccCCcccceecCHhHhccCCCC
Confidence             1123456789999998877654


No 183
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.96  E-value=1e-28  Score=222.82  Aligned_cols=180  Identities=28%  Similarity=0.416  Sum_probs=146.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC---------------CceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD---------------NLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLL  213 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~  213 (335)
                      .++|+..+.||+|+||.||+++..+               ...||+|.+... .......+.+|++++++++|+|+++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            3578889999999999999987532               235899998654 333456799999999999999999999


Q ss_pred             eEEEeCCeEEEEEEecCCCCHhHHhcCCC---------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCE
Q 019842          214 GYSAHDDTRFIVYELMENRSLDIQLHGPS---------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNI  284 (335)
Q Consensus       214 g~~~~~~~~~lv~E~~~~g~L~~~l~~~~---------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Ni  284 (335)
                      +++...+..++||||+++++|.+++....         ....+++..++.++.|+++||+|||+.   +++||||||+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence            99999999999999999999999885421         112478999999999999999999999   999999999999


Q ss_pred             EEcCCCcEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCcc
Q 019842          285 LLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       285 ll~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ++++++.+||+|||++........  ......++..|+|||++.++.++.
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  210 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTT  210 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCc
Confidence            999999999999999865432221  111223467899999998776643


No 184
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.96  E-value=1.1e-28  Score=222.14  Aligned_cols=182  Identities=30%  Similarity=0.414  Sum_probs=149.2

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC------CCceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEe
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAH  218 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~  218 (335)
                      +...++|+..+.||+|+||.||++...      +...+|+|.+... ......++.+|++++.++ +|+||+++++++.+
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   87 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ   87 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence            445567888999999999999999764      2367899988653 233456789999999999 89999999999999


Q ss_pred             CCeEEEEEEecCCCCHhHHhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEE
Q 019842          219 DDTRFIVYELMENRSLDIQLHGP-------------SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNIL  285 (335)
Q Consensus       219 ~~~~~lv~E~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nil  285 (335)
                      ++..+++|||+++|+|..++...             .....+++..++.++.|++.||+|||+.   +++||||||+||+
T Consensus        88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil  164 (293)
T cd05053          88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL  164 (293)
T ss_pred             CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence            99999999999999999998642             2245689999999999999999999999   9999999999999


Q ss_pred             EcCCCcEEEEcccCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          286 LDSKFNAKLSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       286 l~~~~~~kl~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +++++.+||+|||+++........  .....++..|+|||++.++.++
T Consensus       165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  212 (293)
T cd05053         165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYT  212 (293)
T ss_pred             EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcC
Confidence            999999999999999754432211  1122346789999998776553


No 185
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96  E-value=1.7e-28  Score=220.94  Aligned_cols=178  Identities=28%  Similarity=0.426  Sum_probs=148.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC------CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .+|...+.||+|+||.||+|+..      ++..+++|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            35677889999999999999742      355689999876666566789999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc
Q 019842          225 VYELMENRSLDIQLHGPS-------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN  291 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~  291 (335)
                      ||||+++++|.+++....             ....+++..++.++.|++.||+|||++   +++||||||+||++++++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence            999999999999986421             124589999999999999999999999   9999999999999999999


Q ss_pred             EEEEcccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          292 AKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       292 ~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +||+|||++........  ......++..|+|||++.+..++
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  203 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT  203 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCC
Confidence            99999999865433221  11223467889999999877664


No 186
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.96  E-value=1.8e-28  Score=216.07  Aligned_cols=175  Identities=30%  Similarity=0.395  Sum_probs=151.7

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .++|+..+.||+|+||.||+|...+ +..+++|.+.....  .+++.+|++++++++|+||+++++++.+++..++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3578889999999999999998765 78999999864432  67899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..  ....+++..+..++.|+++||.|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        80 ~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (256)
T cd06612          80 CGAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA  154 (256)
T ss_pred             CCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence            999999999853  345789999999999999999999999   999999999999999999999999999866544332


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......++..|+|||++.+..++
T Consensus       155 ~~~~~~~~~~y~~PE~~~~~~~~  177 (256)
T cd06612         155 KRNTVIGTPFWMAPEVIQEIGYN  177 (256)
T ss_pred             ccccccCCccccCHHHHhcCCCC
Confidence            22334578899999999877654


No 187
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96  E-value=3.1e-28  Score=214.74  Aligned_cols=176  Identities=25%  Similarity=0.372  Sum_probs=150.4

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|+||.||.++.. +++.+++|.+...  +....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            4778899999999999998754 5888999988643  344556789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++.... ...+++..+..++.|+++||.|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence            99999999986432 45689999999999999999999998   999999999999999999999999999876544332


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......++..|+|||++.+..++
T Consensus       157 ~~~~~~~~~~y~ape~~~~~~~~  179 (256)
T cd08221         157 MAETVVGTPYYMSPELCQGVKYN  179 (256)
T ss_pred             cccccCCCccccCHhhcCCCCCC
Confidence            22344689999999998776543


No 188
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96  E-value=2e-28  Score=219.69  Aligned_cols=175  Identities=26%  Similarity=0.432  Sum_probs=145.5

Q ss_pred             CCcccceeeecccEEEEEEEe-----CCCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEE
Q 019842          152 SFHESNILGEGGFGCVYKAKL-----DDNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRF  223 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  223 (335)
                      .|+..+.||+|+||.||+++.     .++..||+|.++... ......+.+|++++++++|||++++++++.+.  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            457788999999999999974     357889999986543 33456799999999999999999999998875  5789


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +||||+++++|.+++..  ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+||+|||+++..
T Consensus        85 lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          85 LIMEFLPSGSLKEYLPR--NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             EEEEccCCCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccccc
Confidence            99999999999999853  234689999999999999999999999   9999999999999999999999999998654


Q ss_pred             CCCCc---cccccccccCccccccccCCcCc
Q 019842          304 GSQNK---NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       304 ~~~~~---~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....   ......++..|+|||++.++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  190 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFY  190 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCCCC
Confidence            33221   11123467789999998877654


No 189
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=1.3e-28  Score=228.31  Aligned_cols=171  Identities=25%  Similarity=0.280  Sum_probs=143.8

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ...+|...+.||+|+||.||+|+.. ++..||+|.....      ....|+.++++++|+||+++++++.+.+..++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            3457999999999999999999875 4678898875322      23568999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+. ++|.+++..  ....+++..++.++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+++......
T Consensus       138 ~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  211 (357)
T PHA03209        138 HYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP  211 (357)
T ss_pred             ccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence            995 688887753  345689999999999999999999999   99999999999999999999999999986533221


Q ss_pred             ccccccccccCccccccccCCcCcc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                       ......||..|+|||++.++.++.
T Consensus       212 -~~~~~~gt~~y~aPE~~~~~~~~~  235 (357)
T PHA03209        212 -AFLGLAGTVETNAPEVLARDKYNS  235 (357)
T ss_pred             -ccccccccccccCCeecCCCCCCc
Confidence             222356899999999998877653


No 190
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=5.2e-30  Score=221.40  Aligned_cols=177  Identities=27%  Similarity=0.349  Sum_probs=156.0

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      -++|+..++||+|.||+|-.++-+ +++.+|+|+++..   .++....-..|-++|+..+||.+..|--.++..+.+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            467888999999999999999754 6889999998754   234445567889999999999999998889999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||..+|.|.-+|.+   ...+++.....+-..|..||.|||++   +||+||||.+|.|||.+|.+||+|||+++..-.
T Consensus       247 MeyanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~  320 (516)
T KOG0690|consen  247 MEYANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK  320 (516)
T ss_pred             EEEccCceEeeehhh---hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc
Confidence            999999999988853   45688888889999999999999999   999999999999999999999999999987666


Q ss_pred             CCccccccccccCccccccccCCcCcc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .......+|||+.|.|||++.+..|++
T Consensus       321 ~g~t~kTFCGTPEYLAPEVleDnDYgr  347 (516)
T KOG0690|consen  321 YGDTTKTFCGTPEYLAPEVLEDNDYGR  347 (516)
T ss_pred             ccceeccccCChhhcCchhhccccccc
Confidence            666667889999999999999998875


No 191
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96  E-value=7.2e-30  Score=237.29  Aligned_cols=169  Identities=27%  Similarity=0.415  Sum_probs=141.0

Q ss_pred             cceeeecccEEEEEEEeC-CCceEEEEEe--cc--cCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCe--EEEEEEe
Q 019842          156 SNILGEGGFGCVYKAKLD-DNLHVAVKKL--DC--ATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDT--RFIVYEL  228 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~--~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lv~E~  228 (335)
                      ..+||+|+|-+||||.++ +|.+||--.+  +.  .+....++|..|+.+|+.|+||||++++.++.+.+.  .-+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            567999999999999764 5777774322  21  234456889999999999999999999999987764  7889999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~~~~~~  307 (335)
                      +..|+|..|+.   +...++.+....|++||++||.|||++ .|+|+|||||.+||+|+. -|.+||+|+|||.......
T Consensus       125 ~TSGtLr~Y~k---k~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  125 FTSGTLREYRK---KHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             ccCCcHHHHHH---HhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence            99999999985   345688899999999999999999997 789999999999999986 5899999999997655443


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..  ...|||.|||||++. ..|.
T Consensus       201 ak--svIGTPEFMAPEmYE-E~Yn  221 (632)
T KOG0584|consen  201 AK--SVIGTPEFMAPEMYE-ENYN  221 (632)
T ss_pred             cc--eeccCccccChHHHh-hhcc
Confidence            33  368999999999987 4443


No 192
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96  E-value=8.7e-29  Score=228.16  Aligned_cols=180  Identities=30%  Similarity=0.404  Sum_probs=144.7

Q ss_pred             HhcCCcccceeeecccEEEEEEEe------CCCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC-
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL------DDNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD-  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-  219 (335)
                      ..++|+..+.||+|+||.||+|..      .+++.||||+++... ......+.+|+.++.++ +|+||+++++++... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            346788999999999999999963      356789999997543 33456788999999999 689999999988654 


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCC--------------------------------------------------------
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSH--------------------------------------------------------  243 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------------------  243 (335)
                      ...+++|||+++|+|.++++....                                                        
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            467999999999999988864210                                                        


Q ss_pred             --------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--ccccc
Q 019842          244 --------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--NNLKL  313 (335)
Q Consensus       244 --------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--~~~~~  313 (335)
                              ...+++..+..++.|+++||+|||++   +++||||||+||++++++.+||+|||++........  .....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  241 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA  241 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence                    12478889999999999999999999   999999999999999999999999999865432211  11122


Q ss_pred             ccccCccccccccCCcCc
Q 019842          314 SGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       314 ~gt~~y~aPE~l~~~~~~  331 (335)
                      .++..|+|||.+.++.++
T Consensus       242 ~~~~~y~aPE~~~~~~~~  259 (343)
T cd05103         242 RLPLKWMAPETIFDRVYT  259 (343)
T ss_pred             CCCcceECcHHhcCCCCC
Confidence            356789999998777654


No 193
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96  E-value=1.4e-28  Score=220.63  Aligned_cols=176  Identities=26%  Similarity=0.397  Sum_probs=148.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||+|+||.||++... ++..||+|.+... .......+.+|++++++++|+||+++++++...+..++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            35777889999999999999876 6889999988654 333456789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|..++........+++..+..++.|++.||.|||+.+  +++||||||+||++++++.+||+|||++........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA  158 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence            999999988865333457899999999999999999999632  899999999999999999999999999865432222


Q ss_pred             cccccccccCccccccccCCcC
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                        ....++..|+|||++.++..
T Consensus       159 --~~~~~~~~y~aPE~~~~~~~  178 (286)
T cd06622         159 --KTNIGCQSYMAPERIKSGGP  178 (286)
T ss_pred             --ccCCCccCccCcchhcCCCC
Confidence              22357889999999866543


No 194
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.96  E-value=1.8e-29  Score=233.78  Aligned_cols=178  Identities=27%  Similarity=0.392  Sum_probs=151.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCC-----CceEEEEEecc-cCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDD-----NLHVAVKKLDC-ATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      ..+.....++||+|-||.||+|...+     ...||||.-+. ...+..+.|+.|..+|++++||||++|+|+|.+ ...
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~  465 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM  465 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence            33444556889999999999997542     24588898865 355667889999999999999999999999987 478


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      |+|||.++.|.|..+|..  +...|+......++.|++.||.|||+.   .+|||||.++|||+....-+||+|||+++.
T Consensus       466 WivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~  540 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY  540 (974)
T ss_pred             eEEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence            999999999999999974  446788999999999999999999999   999999999999999999999999999998


Q ss_pred             CCCCCccccc-cccccCccccccccCCcCcc
Q 019842          303 DGSQNKNNLK-LSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       303 ~~~~~~~~~~-~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ..+......+ ..-...|||||.+.-.++|+
T Consensus       541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTt  571 (974)
T KOG4257|consen  541 LEDDAYYKASRGKLPIKWMAPESINFRRFTT  571 (974)
T ss_pred             ccccchhhccccccceeecCccccchhcccc
Confidence            8766654433 23466899999999888764


No 195
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96  E-value=3e-28  Score=216.11  Aligned_cols=174  Identities=29%  Similarity=0.426  Sum_probs=146.7

Q ss_pred             CCcccceeeecccEEEEEEEeCCCceEEEEEecccC------chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCAT------QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      +|...+.||+|+||.||+|...+++.+|+|.+....      ......+.+|++++++++|+||+++++++.+.+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            467788999999999999998889999999886432      12235688999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +||+++++|.+++..   ...+++..+..++.|++.||+|||+.   +++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  154 (265)
T cd06631          81 MEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW  154 (265)
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence            999999999999853   34688999999999999999999998   999999999999999999999999999854321


Q ss_pred             C------CccccccccccCccccccccCCcCc
Q 019842          306 Q------NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~------~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .      ........++..|+|||++.+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  186 (265)
T cd06631         155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYG  186 (265)
T ss_pred             ccccccccccccccCCCccccChhhhcCCCCc
Confidence            1      1111234588999999999876553


No 196
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96  E-value=2.1e-28  Score=218.81  Aligned_cols=176  Identities=27%  Similarity=0.368  Sum_probs=144.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCc----eEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNL----HVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  223 (335)
                      .++|+..+.||+|+||+||+|++. ++.    .||+|.+... ......++.+|+.+++.++|+||+++++++... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence            356788899999999999999753 443    4899998654 334456789999999999999999999999764 578


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +++||+++|+|.++++.  ....+++..++.++.|++.||+|||++   +++||||||+|||+++++.+||+|||+++..
T Consensus        85 l~~~~~~~g~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          85 LVTQLMPYGCLLDYVRE--NKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             EEEEcCCCCCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence            99999999999999864  234689999999999999999999999   9999999999999999999999999999765


Q ss_pred             CCCCcc--ccccccccCccccccccCCcCc
Q 019842          304 GSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       304 ~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......  .....++..|+|||.+.++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (279)
T cd05109         160 DIDETEYHADGGKVPIKWMALESILHRRFT  189 (279)
T ss_pred             ccccceeecCCCccchhhCCHHHhccCCCC
Confidence            432221  1112346789999999877654


No 197
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=1.3e-28  Score=223.48  Aligned_cols=179  Identities=29%  Similarity=0.406  Sum_probs=146.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC--------CCceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD--------DNLHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD  219 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~  219 (335)
                      .++|...+.||+|+||.||+|+..        +...+|+|.++.. ......++.+|+++++++ +|+||+++++++.+.
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            467888999999999999999752        2356999998754 234456788999999999 799999999999999


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEE
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSH-------------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILL  286 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill  286 (335)
                      +..++||||+++|+|.+++.....             ...+++..+++++.|++.||+|||+.   +++||||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence            999999999999999999865321             23589999999999999999999998   99999999999999


Q ss_pred             cCCCcEEEEcccCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          287 DSKFNAKLSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       287 ~~~~~~kl~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++++.+||+|||+++........  .....++..|+|||++.++.++
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  220 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT  220 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCC
Confidence            99999999999998654322211  1112245689999999877654


No 198
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96  E-value=2e-28  Score=221.59  Aligned_cols=172  Identities=30%  Similarity=0.483  Sum_probs=144.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|...+.||+|+||.||+|+.. ++..||+|.+.... ......+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            46888899999999999999875 57899999986443 22345678899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++ ++|..++..  ....+++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+|||++........
T Consensus        86 ~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          86 LD-KDLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             cc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            97 688887753  234688999999999999999999999   999999999999999999999999999865433222


Q ss_pred             cccccccccCccccccccCC
Q 019842          309 NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~  179 (301)
T cd07873         160 TYSNEVVTLWYRPPDILLGS  179 (301)
T ss_pred             cccccceeecccCcHHHhCC
Confidence            22233578899999998654


No 199
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96  E-value=3.1e-28  Score=215.33  Aligned_cols=167  Identities=27%  Similarity=0.466  Sum_probs=137.4

Q ss_pred             eeecccEEEEEEEeC---CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD---DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||.||+|.+.   ++..||+|.+.... ....+++.+|+.++++++|+||+++++++.. +..++||||+++++|
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L   81 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL   81 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence            899999999999764   35579999986543 3345679999999999999999999998864 578999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc---cc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN---NL  311 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~---~~  311 (335)
                      .+++..  ....+++..+++++.|++.||+|||++   +++||||||+||++++++.+||+|||++.........   ..
T Consensus        82 ~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05115          82 NKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS  156 (257)
T ss_pred             HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence            998863  235689999999999999999999999   9999999999999999999999999998654322211   11


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...++..|+|||.+.++.++
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05115         157 AGKWPLKWYAPECINFRKFS  176 (257)
T ss_pred             CCCCCcccCCHHHHccCCCC
Confidence            12235789999998877654


No 200
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96  E-value=2.2e-28  Score=221.52  Aligned_cols=179  Identities=26%  Similarity=0.353  Sum_probs=148.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCC
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDD  220 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  220 (335)
                      ..++|...+.||+|+||.||+|...      ++..||+|.++... ......+.+|+++++++ +|+||+++++++...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            3457888999999999999999742      34579999886543 33456789999999999 7999999999999999


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ..+++|||+++|+|.++++.. ....+++.+++.++.|++.||+|||++   +++||||||+||++++++.+|++|||++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRK-RESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence            999999999999999998642 234489999999999999999999999   9999999999999999999999999998


Q ss_pred             eeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          301 ITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       301 ~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ........  ......++..|+|||++.++.++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  221 (302)
T cd05055         189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYT  221 (302)
T ss_pred             ccccCCCceeecCCCCcccccCCHhhhccCCCC
Confidence            65432221  11122456789999998877654


No 201
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96  E-value=2.5e-28  Score=220.11  Aligned_cols=179  Identities=29%  Similarity=0.421  Sum_probs=148.0

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC-----------------CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD-----------------NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVC  211 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~  211 (335)
                      .++|+..+.||+|+||.||+|...+                 +..||+|.+.... ......+.+|++++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3578889999999999999987642                 2458999986543 345667999999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEecCCCCHhHHhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 019842          212 LLGYSAHDDTRFIVYELMENRSLDIQLHGPS--------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSN  283 (335)
Q Consensus       212 l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~N  283 (335)
                      +++++..++..++++||+++++|.+++....        ....+++..++.++.|++.||+|||+.   +++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence            9999999999999999999999999886422        123689999999999999999999999   99999999999


Q ss_pred             EEEcCCCcEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          284 ILLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       284 ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |++++++.++|+|||+++.......  ......++..|+|||++.++.++
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFT  210 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCC
Confidence            9999999999999999865433221  11223457789999998876554


No 202
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=2.1e-28  Score=221.65  Aligned_cols=181  Identities=28%  Similarity=0.414  Sum_probs=148.6

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC--------CCceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEE
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD--------DNLHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSA  217 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  217 (335)
                      ...++|...+.||+|+||.||+|+..        ++..||+|.+... .....+++.+|+.+++.+ +||||+++++++.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            34567788899999999999999641        2457999988643 234457799999999999 8999999999999


Q ss_pred             eCCeEEEEEEecCCCCHhHHhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCE
Q 019842          218 HDDTRFIVYELMENRSLDIQLHGPSH-------------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNI  284 (335)
Q Consensus       218 ~~~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Ni  284 (335)
                      ..+..+++|||+++|+|.+++.....             ...+++..++.++.|+++||+|||++   +++||||||+||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni  168 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV  168 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence            99999999999999999999865321             24588999999999999999999999   999999999999


Q ss_pred             EEcCCCcEEEEcccCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          285 LLDSKFNAKLSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       285 ll~~~~~~kl~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++++++.+||+|||+++........  .....++..|+|||++.++.++
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  217 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYT  217 (304)
T ss_pred             EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCC
Confidence            9999999999999999765432221  1122456789999999877654


No 203
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96  E-value=2.3e-28  Score=217.93  Aligned_cols=177  Identities=25%  Similarity=0.376  Sum_probs=147.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC------CCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~  223 (335)
                      ++|+..+.||+|+||.||+|+..      +...|++|.+...... ...++.+|++++++++|+||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            56788899999999999999864      3467899988654433 4578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          224 IVYELMENRSLDIQLHGPSHG------SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                      +||||+++|+|.+++......      ..+++..+..++.|++.||+|||+.   +++||||||+||++++++.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence            999999999999998653322      2689999999999999999999999   9999999999999999999999999


Q ss_pred             cCceeCCCCC-ccccccccccCccccccccCCcC
Q 019842          298 GLAITDGSQN-KNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       298 gla~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      |++....... .......++..|+|||.+.++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  195 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDF  195 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCC
Confidence            9986432221 12222346778999999877654


No 204
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.96  E-value=1.4e-28  Score=219.43  Aligned_cols=179  Identities=26%  Similarity=0.392  Sum_probs=148.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      .++|...+.||+|+||.||+|...      ++..||+|.+.... ......+.+|+.+++.++|+||+++++++...+..
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            467888999999999999999764      24689999986443 33456788999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 019842          223 FIVYELMENRSLDIQLHGPS-------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLS  295 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~  295 (335)
                      ++||||+++|+|.+++....       ....+++..++.++.|++.||.|||+.   +++||||||+||++++++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence            99999999999999886422       123478999999999999999999998   99999999999999999999999


Q ss_pred             cccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          296 DFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       296 Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |||+++.......  ......++..|+|||.+.++.++
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFT  199 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCC
Confidence            9999865433221  11223467899999999877654


No 205
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96  E-value=3.1e-28  Score=214.71  Aligned_cols=172  Identities=34%  Similarity=0.535  Sum_probs=146.6

Q ss_pred             ceeeecccEEEEEEEeCC----CceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLDD----NLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|...+    +..|++|.+...... ..+.+.+|++.+..++|+|++++++++.+++..++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            469999999999998754    788999999765433 367899999999999999999999999999999999999999


Q ss_pred             CCHhHHhcCCCC------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          232 RSLDIQLHGPSH------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       232 g~L~~~l~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ++|.+++.....      ...+++..++.++.|+++||+|||++   +++||||+|+||++++++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999875321      36799999999999999999999998   999999999999999999999999999976544


Q ss_pred             CC--ccccccccccCccccccccCCcCc
Q 019842          306 QN--KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~--~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..  .......++..|+|||.+.++.++
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFT  185 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcc
Confidence            32  122234578899999998876543


No 206
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96  E-value=3.8e-28  Score=215.53  Aligned_cols=175  Identities=30%  Similarity=0.407  Sum_probs=144.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-----chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-----QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTR  222 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  222 (335)
                      ++|...+.||+|+||.||+|... ++..|++|.+....     ....+.+.+|++++++++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            46888999999999999999864 58899999875321     22346788999999999999999999998764  468


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      +++|||+++++|.+++..   ...+++...+.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++..
T Consensus        82 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence            899999999999998853   24588899999999999999999999   999999999999999999999999999864


Q ss_pred             CCCCC---ccccccccccCccccccccCCcCc
Q 019842          303 DGSQN---KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       303 ~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....   .......++..|+|||++.+..++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  187 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYG  187 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCCC
Confidence            32211   111234588899999999876654


No 207
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96  E-value=1.7e-28  Score=222.35  Aligned_cols=177  Identities=31%  Similarity=0.506  Sum_probs=144.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCc--eEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNL--HVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ++|+..+.||+|+||.||+|.+. ++.  .+++|.+... .......+.+|++++.++ +|+||+++++++.+++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            57788899999999999999864 343  4677777543 334456789999999999 899999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcE
Q 019842          226 YELMENRSLDIQLHGPS-------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNA  292 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~  292 (335)
                      +||+++|+|.++++...             ....+++..++.++.|++.||+|||++   +++||||||+|||+++++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence            99999999999886421             123589999999999999999999999   99999999999999999999


Q ss_pred             EEEcccCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          293 KLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       293 kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ||+|||++....... ......++..|+|||++.+..++
T Consensus       164 kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  201 (303)
T cd05088         164 KIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYT  201 (303)
T ss_pred             EeCccccCcccchhh-hcccCCCcccccCHHHHhccCCc
Confidence            999999985432111 11112346689999998776654


No 208
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.96  E-value=9.5e-29  Score=231.44  Aligned_cols=173  Identities=29%  Similarity=0.354  Sum_probs=149.7

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCC-C-----CceeEEeeEEEeCCeEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIH-H-----PNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~  223 (335)
                      -+|.+.++||+|.||.|-+|.. .+++.||||+++.. +.-.++-..|+.+|..|+ |     -|+|++++++...++.|
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            3788899999999999999975 46999999999743 445566788999999997 4     48999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC--CcEEEEcccCce
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK--FNAKLSDFGLAI  301 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~--~~~kl~Dfgla~  301 (335)
                      ||+|.++ -+|++++.. ++...++...+..|+.||+.||.+||+.   +|||+||||+||||.+.  ..+||+|||.|.
T Consensus       265 iVfELL~-~NLYellK~-n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  265 IVFELLS-TNLYELLKN-NKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSC  339 (586)
T ss_pred             eeehhhh-hhHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccccc
Confidence            9999995 799999976 3456699999999999999999999999   99999999999999764  469999999997


Q ss_pred             eCCCCCccccccccccCccccccccCCcCcc
Q 019842          302 TDGSQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       302 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .......   ...-+..|.|||++.+.+|++
T Consensus       340 ~~~q~vy---tYiQSRfYRAPEVILGlpY~~  367 (586)
T KOG0667|consen  340 FESQRVY---TYIQSRFYRAPEVILGLPYDT  367 (586)
T ss_pred             ccCCcce---eeeeccccccchhhccCCCCC
Confidence            7655444   346788999999999999975


No 209
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.96  E-value=2.5e-28  Score=220.57  Aligned_cols=177  Identities=29%  Similarity=0.463  Sum_probs=144.1

Q ss_pred             cCCcccceeeecccEEEEEEEeCC-C--ceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD-N--LHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ++|+..+.||+|+||.||+|...+ +  ..+++|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            578889999999999999998753 3  34788887643 334456789999999999 799999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcE
Q 019842          226 YELMENRSLDIQLHGPS-------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNA  292 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~  292 (335)
                      +||+++|+|.+++....             ....+++..++.++.|++.||+|||+.   +++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence            99999999999986421             123588999999999999999999998   99999999999999999999


Q ss_pred             EEEcccCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          293 KLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       293 kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ||+|||++........ ......+..|+|||++.++.++
T Consensus       159 kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~  196 (297)
T cd05089         159 KIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYT  196 (297)
T ss_pred             EECCcCCCccccceec-cCCCCcCccccCchhhccCCCC
Confidence            9999999854321111 1112235679999999877654


No 210
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96  E-value=1.9e-28  Score=217.89  Aligned_cols=167  Identities=26%  Similarity=0.361  Sum_probs=135.5

Q ss_pred             eeeecccEEEEEEEeCC---CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          158 ILGEGGFGCVYKAKLDD---NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      .||+|+||.||+|...+   ...+++|.+.... ......+.+|++.++.++|+||+++++.+.+.+..++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997543   3568888775432 3345678899999999999999999999999999999999999999


Q ss_pred             HhHHhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--c
Q 019842          234 LDIQLHGPSH--GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--N  309 (335)
Q Consensus       234 L~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--~  309 (335)
                      |.+++.....  ....++.....++.|++.||+|||++   +++||||||+|||+++++.+||+|||++........  .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            9999865321  23356788899999999999999999   999999999999999999999999999854322211  1


Q ss_pred             ccccccccCccccccccC
Q 019842          310 NLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~  327 (335)
                      .....++..|+|||++..
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (269)
T cd05042         159 KDCHAVPLRWLAPELVEI  176 (269)
T ss_pred             cCCCCCcccccCHHHHhh
Confidence            122245678999999754


No 211
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96  E-value=1.8e-28  Score=218.20  Aligned_cols=175  Identities=29%  Similarity=0.449  Sum_probs=147.1

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC------
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD------  219 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~------  219 (335)
                      .+++.|+..+.||+|+||.||+|... +++.||+|.+.... ....++.+|+.++.++ +|+||+++++++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            35667888899999999999999865 57889999986443 3446788999999998 799999999998753      


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      +..+++|||+++++|.+++... ....+++..+..++.|++.||+|||+.   +++||||+|+||++++++.+||+|||+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence            4689999999999999988642 345689999999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccC
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      +..............|+..|+|||++..
T Consensus       158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~  185 (272)
T cd06637         158 SAQLDRTVGRRNTFIGTPYWMAPEVIAC  185 (272)
T ss_pred             ceecccccccCCcccccccccCHhHhcc
Confidence            9765433333334568999999999864


No 212
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96  E-value=2.5e-28  Score=217.11  Aligned_cols=176  Identities=29%  Similarity=0.469  Sum_probs=145.5

Q ss_pred             cCCcccceeeecccEEEEEEEeCC-C---ceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD-N---LHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      ++|+..+.||+|+||.||+|.... +   ..||+|.+... ......+|.+|++++++++||||+++++++.+++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            356778999999999999998653 2   36999998654 344557899999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++|+|.+++..  ....+++..++.++.|++.||.|||++   +++||||||+||++++++.+||+|||++.....
T Consensus        84 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          84 TEFMENGALDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             EecCCCCcHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence            999999999998864  235689999999999999999999999   999999999999999999999999999865432


Q ss_pred             CCcc---ccccc--cccCccccccccCCcCc
Q 019842          306 QNKN---NLKLS--GTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~---~~~~~--gt~~y~aPE~l~~~~~~  331 (335)
                      ....   .....  .+..|+|||++.++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFT  189 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhccCccc
Confidence            2111   11111  24579999999877664


No 213
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.96  E-value=3.5e-28  Score=218.71  Aligned_cols=177  Identities=31%  Similarity=0.410  Sum_probs=144.4

Q ss_pred             CCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      +|+..+.||+|+||.||+|...      +...+++|.+.... .....++.+|+.+++.++||||+++++.+..++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4677889999999999999753      23568888876443 3345679999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 019842          225 VYELMENRSLDIQLHGPS---------------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSN  283 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~N  283 (335)
                      ++||+++|+|.+++....                     ....+++..++.++.|++.||+|||+.   +++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence            999999999998875321                     123588999999999999999999999   99999999999


Q ss_pred             EEEcCCCcEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          284 ILLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       284 ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |++++++.+||+|||+++.......  ......++..|+|||++.+..++
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  207 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYT  207 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcc
Confidence            9999999999999999865432221  11223456789999998776654


No 214
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96  E-value=2e-28  Score=216.14  Aligned_cols=161  Identities=29%  Similarity=0.442  Sum_probs=135.9

Q ss_pred             ceeeecccEEEEEEEeCCCc-----------eEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          157 NILGEGGFGCVYKAKLDDNL-----------HVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      +.||+|+||.||+|.+.+..           .|++|.+...... ...+.+|+.++++++||||+++++++.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            36899999999999876433           4777876544332 6788999999999999999999999988 778999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-------cEEEEccc
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-------NAKLSDFG  298 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-------~~kl~Dfg  298 (335)
                      +||+++|+|.+++...  ...+++..++.++.|++.||+|||++   +++||||||+||+++.++       .+||+|||
T Consensus        79 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          79 EEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence            9999999999998642  23789999999999999999999998   999999999999999888       79999999


Q ss_pred             CceeCCCCCccccccccccCccccccccCC
Q 019842          299 LAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       299 la~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ++......    ....++..|+|||++.+.
T Consensus       154 ~a~~~~~~----~~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         154 IPITVLSR----EERVERIPWIAPECIRNG  179 (259)
T ss_pred             cccccccc----cccccCCCccChhhhcCC
Confidence            98765431    123467789999998776


No 215
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96  E-value=2.7e-28  Score=218.46  Aligned_cols=178  Identities=28%  Similarity=0.409  Sum_probs=148.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC------CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .+|...+.||+|+||.||++...      ++..+++|.+..........+.+|++++++++|+||+++++++.+.+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45677889999999999999642      356789999877666667789999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcE
Q 019842          225 VYELMENRSLDIQLHGPSH------------GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNA  292 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~  292 (335)
                      ++||+++++|.+++.....            ...+++..++.++.|++.||+|||+.   +++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence            9999999999998864221            13589999999999999999999999   99999999999999999999


Q ss_pred             EEEcccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          293 KLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       293 kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ||+|||++........  ......+++.|+|||++.++.++
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  202 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFT  202 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcC
Confidence            9999999865432221  11122356789999999877664


No 216
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=2.6e-28  Score=222.23  Aligned_cols=181  Identities=28%  Similarity=0.402  Sum_probs=147.3

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC--------CCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEEE
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD--------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYSA  217 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~  217 (335)
                      ...++|...+.||+|+||.||+|+..        ....+|+|.+.... .....++.+|+++++++ +||||+++++++.
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT   88 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence            34467888999999999999999742        24568999886432 33456788999999999 6999999999999


Q ss_pred             eCCeEEEEEEecCCCCHhHHhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCE
Q 019842          218 HDDTRFIVYELMENRSLDIQLHGPS-------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNI  284 (335)
Q Consensus       218 ~~~~~~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Ni  284 (335)
                      +.+..+++|||+++|+|.+++....             ....+++..+.+++.|++.||.|||++   +++||||||+||
T Consensus        89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni  165 (314)
T cd05099          89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV  165 (314)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence            9999999999999999999986422             124589999999999999999999999   999999999999


Q ss_pred             EEcCCCcEEEEcccCceeCCCCCccc--cccccccCccccccccCCcCc
Q 019842          285 LLDSKFNAKLSDFGLAITDGSQNKNN--LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       285 ll~~~~~~kl~Dfgla~~~~~~~~~~--~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++++++.+||+|||+++.........  ....++..|+|||++.++.++
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  214 (314)
T cd05099         166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYT  214 (314)
T ss_pred             EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcC
Confidence            99999999999999997554322111  112345679999999887664


No 217
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96  E-value=6.3e-28  Score=212.82  Aligned_cols=176  Identities=27%  Similarity=0.406  Sum_probs=147.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC-CeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD-DTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lv~E  227 (335)
                      +|+..+.||+|++|.||++... +++.|++|++...  .....+.+.+|++++++++|+|++++++.+... ...+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4778899999999999999865 5788999998643  233456789999999999999999999987644 46899999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|.+++... ....+++.+++.++.|++.|++|||+.   +++||||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~  156 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC  156 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence            99999999888642 345689999999999999999999999   99999999999999999999999999987654333


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......+++.|+|||++.++.++
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~  180 (257)
T cd08223         157 DMASTLIGTPYYMSPELFSNKPYN  180 (257)
T ss_pred             CccccccCCcCccChhHhcCCCCC
Confidence            333345688999999999887654


No 218
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96  E-value=1.5e-28  Score=220.12  Aligned_cols=177  Identities=29%  Similarity=0.414  Sum_probs=144.9

Q ss_pred             CCcccceeeecccEEEEEEEeC------CCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      +|...+.||+|+||.||+|...      ++..||+|++...... ....+.+|+.++.+++||||+++++++.+.+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4556778999999999999763      3578999999754332 34668899999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc
Q 019842          225 VYELMENRSLDIQLHGP-------------SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN  291 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~  291 (335)
                      ++||+++++|.+++...             .....+++..++.++.|++.||+|||+.   +++||||||+||++++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence            99999999999887421             1123588999999999999999999999   9999999999999999999


Q ss_pred             EEEEcccCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          292 AKLSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       292 ~kl~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +||+|||+++........  .....+++.|+|||++.++.++
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  204 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFS  204 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCC
Confidence            999999998654332211  1122457789999999877664


No 219
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.96  E-value=3.4e-28  Score=216.40  Aligned_cols=167  Identities=25%  Similarity=0.324  Sum_probs=137.6

Q ss_pred             eeeecccEEEEEEEeCC---CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          158 ILGEGGFGCVYKAKLDD---NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      .||+|+||.||+|...+   +..+++|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999998653   4578999886543 3344578999999999999999999999999999999999999999


Q ss_pred             HhHHhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--c
Q 019842          234 LDIQLHGPS--HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--N  309 (335)
Q Consensus       234 L~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--~  309 (335)
                      |.+++....  .....++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+|||+++.......  .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            999986422  223467788889999999999999999   999999999999999999999999999865432221  1


Q ss_pred             ccccccccCccccccccC
Q 019842          310 NLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~  327 (335)
                      .....++..|+|||++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~  176 (269)
T cd05087         159 PDQLWVPLRWIAPELVDE  176 (269)
T ss_pred             CCCcCCcccccCHhHhcc
Confidence            112356788999999864


No 220
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96  E-value=4.6e-28  Score=213.58  Aligned_cols=171  Identities=33%  Similarity=0.488  Sum_probs=146.8

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-----chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-----QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      +|+..+.||+|++|.||+|... ++..|++|.+....     ++..+.+.+|++++++++|+||+++++++.+++..+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667789999999999999876 78899999885432     23456799999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +||+++++|.+++..   ...+++..+..++.|+++||+|||+.   +++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            999999999999853   34688999999999999999999999   999999999999999999999999999865433


Q ss_pred             CCccccccccccCccccccccCCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .. ......++..|+|||.+.++.
T Consensus       155 ~~-~~~~~~~~~~y~~pe~~~~~~  177 (258)
T cd06632         155 FS-FAKSFKGSPYWMAPEVIAQQG  177 (258)
T ss_pred             cc-cccccCCCcceeCHHHhcCCC
Confidence            32 122346889999999987654


No 221
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.96  E-value=4.1e-28  Score=218.22  Aligned_cols=172  Identities=30%  Similarity=0.469  Sum_probs=143.8

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++|+||+++++++.+++..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57888899999999999999875 678999999864432 2234577899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++ ++|.+++...  ...+++.....++.|+++||.|||+.   +++||||||+||++++++.+||+|||+++.......
T Consensus        85 ~~-~~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  158 (291)
T cd07844          85 LD-TDLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK  158 (291)
T ss_pred             CC-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence            98 5898887642  34689999999999999999999999   999999999999999999999999999865432222


Q ss_pred             cccccccccCccccccccCC
Q 019842          309 NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......++..|+|||++.+.
T Consensus       159 ~~~~~~~~~~~~aPE~~~~~  178 (291)
T cd07844         159 TYSNEVVTLWYRPPDVLLGS  178 (291)
T ss_pred             cccccccccccCCcHHhhcC
Confidence            22223468899999998653


No 222
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96  E-value=1.3e-28  Score=222.01  Aligned_cols=170  Identities=33%  Similarity=0.414  Sum_probs=146.0

Q ss_pred             ccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          155 ESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      ....||+|+||.||++... ++..||+|.+..........+.+|+..+++++|+||+++++.+...+..++||||+++++
T Consensus        26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~  105 (292)
T cd06658          26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA  105 (292)
T ss_pred             hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence            3456999999999999864 588999999876555566778999999999999999999999999999999999999999


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccccc
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKL  313 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~  313 (335)
                      |.+++..    ..+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||++.............
T Consensus       106 L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  178 (292)
T cd06658         106 LTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL  178 (292)
T ss_pred             HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence            9988742    3588999999999999999999999   99999999999999999999999999986543322222334


Q ss_pred             ccccCccccccccCCcCc
Q 019842          314 SGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       314 ~gt~~y~aPE~l~~~~~~  331 (335)
                      .++..|+|||++.+..++
T Consensus       179 ~~~~~y~aPE~~~~~~~~  196 (292)
T cd06658         179 VGTPYWMAPEVISRLPYG  196 (292)
T ss_pred             ecCccccCHHHHccCCCC
Confidence            688999999999776654


No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.96  E-value=5.6e-28  Score=214.48  Aligned_cols=173  Identities=28%  Similarity=0.439  Sum_probs=145.3

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccCch---------hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQD---------AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      |.....||+|++|.||+|... +++.+|+|.+......         ..+.+.+|++++++++||||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            566789999999999999764 5789999988543221         235688999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++++||+++++|.+++..   ...+++..+..++.|++.||+|||+.   +++||||+|+||++++++.+||+|||+++.
T Consensus        82 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~  155 (267)
T cd06628          82 NIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKK  155 (267)
T ss_pred             EEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence            999999999999999853   35688999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCCC------ccccccccccCccccccccCCcCc
Q 019842          303 DGSQN------KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       303 ~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....      .......|+..|+|||.+.++.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  190 (267)
T cd06628         156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYT  190 (267)
T ss_pred             cccccccCCccccccccCCCcCccChhHhccCCCC
Confidence            53211      111234578899999999877664


No 224
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96  E-value=4.9e-28  Score=215.83  Aligned_cols=174  Identities=30%  Similarity=0.386  Sum_probs=150.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||.|++|.||+|... +++.|++|.+.... ......+.+|+++++.++|+|++++++++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            36777889999999999999865 58899999986543 44556789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..    ..+++..+..++.|++.||.|||+.   +++||||+|+||++++++.++|+|||+++.......
T Consensus        81 ~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  153 (274)
T cd06609          81 CGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS  153 (274)
T ss_pred             eCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence            999999999853    2789999999999999999999999   999999999999999999999999999977654433


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......++..|+|||++.+..++
T Consensus       154 ~~~~~~~~~~y~~PE~~~~~~~~  176 (274)
T cd06609         154 KRNTFVGTPFWMAPEVIKQSGYD  176 (274)
T ss_pred             ccccccCCccccChhhhccCCCC
Confidence            33345688899999999887653


No 225
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.8e-29  Score=233.38  Aligned_cols=170  Identities=29%  Similarity=0.434  Sum_probs=151.6

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHh
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLD  235 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~  235 (335)
                      -+||+|.||+||-|+.. +...+|||.+...+....+-+..||.+-++|+|+|||+++|.|.+++..-+.||-++||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            37999999999999865 46678999998777777888999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEcccCceeCCCCCccccc
Q 019842          236 IQLHGPSHGSAL--TWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAITDGSQNKNNLK  312 (335)
Q Consensus       236 ~~l~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~  312 (335)
                      +.|+.  +.+++  .+...-.+..||++||.|||++   .|||||||-+|||++. .|.+||+|||-++.....+..+.+
T Consensus       661 sLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET  735 (1226)
T KOG4279|consen  661 SLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET  735 (1226)
T ss_pred             HHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence            99974  45666  7888889999999999999999   9999999999999975 799999999999776666666667


Q ss_pred             cccccCccccccccCCcCc
Q 019842          313 LSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       313 ~~gt~~y~aPE~l~~~~~~  331 (335)
                      +.||..|||||++-.|+-+
T Consensus       736 FTGTLQYMAPEvIDqG~RG  754 (1226)
T KOG4279|consen  736 FTGTLQYMAPEVIDQGPRG  754 (1226)
T ss_pred             cccchhhhChHhhccCCcC
Confidence            8899999999999887643


No 226
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96  E-value=6e-28  Score=217.22  Aligned_cols=173  Identities=29%  Similarity=0.392  Sum_probs=143.5

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      +++|...+.||+|+||.||+|... ++..|++|.+..... .....+.+|++++++++|+||+++++++.+++..++|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            568888999999999999999764 688999999864432 233467899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++ +++.+.+..  ....+++..+..++.|+++||.|||+.   +++||||||+||+++.++.+||+|||+++......
T Consensus        84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  157 (291)
T cd07870          84 YMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPS  157 (291)
T ss_pred             ccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence            996 677666543  234578888999999999999999999   99999999999999999999999999986543322


Q ss_pred             ccccccccccCccccccccCC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .......++..|+|||++.++
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~  178 (291)
T cd07870         158 QTYSSEVVTLWYRPPDVLLGA  178 (291)
T ss_pred             CCCCCccccccccCCceeecC
Confidence            222233578899999998754


No 227
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.96  E-value=4.3e-28  Score=218.85  Aligned_cols=171  Identities=36%  Similarity=0.496  Sum_probs=144.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCch-----hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQD-----AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      +|+..+.||+|++|.||+|... +++.|++|++......     ....+.+|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4677889999999999999865 6889999999654322     345678899999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+ +|+|.+++....  ..+++..++.++.|+++||+|||++   +++||||+|+||+++.++.+||+|||++.....
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 899999986422  3699999999999999999999999   999999999999999999999999999976544


Q ss_pred             CCccccccccccCccccccccCC
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .........++..|+|||.+.++
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~  177 (298)
T cd07841         155 PNRKMTHQVVTRWYRAPELLFGA  177 (298)
T ss_pred             CCccccccccceeeeCHHHHhCC
Confidence            33222233467889999988553


No 228
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.96  E-value=3.6e-28  Score=217.39  Aligned_cols=179  Identities=25%  Similarity=0.354  Sum_probs=148.1

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC-----CceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEe-CCeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD-----NLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAH-DDTR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~  222 (335)
                      .++|+..++||+|+||.||+|...+     +..|++|++... .......+.+|+.++++++|+||+++++++.+ +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4678889999999999999998765     688999988644 33445678999999999999999999999876 4678


Q ss_pred             EEEEEecCCCCHhHHhcCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          223 FIVYELMENRSLDIQLHGPSHG-----SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                      ++++||+++++|.+++......     ..+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999998653222     5699999999999999999999998   9999999999999999999999999


Q ss_pred             cCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          298 GLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       298 gla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |+++........  .....++..|+|||++.+..++
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~  197 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYS  197 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCC
Confidence            999754322211  1122456789999999776553


No 229
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96  E-value=4.1e-28  Score=214.80  Aligned_cols=175  Identities=28%  Similarity=0.396  Sum_probs=145.3

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      ++|...+.||+|++|.||+|..+++..+++|.+.... ...+.+.+|++++++++|+|++++++++.. +..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence            4677788999999999999998877789999876433 234678899999999999999999998754 56899999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc-c
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK-N  309 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~  309 (335)
                      +++|.+++... ....+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++........ .
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05069          84 KGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             CCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence            99999998652 334589999999999999999999999   999999999999999999999999999966533221 1


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||++.++.++
T Consensus       160 ~~~~~~~~~y~~Pe~~~~~~~~  181 (260)
T cd05069         160 RQGAKFPIKWTAPEAALYGRFT  181 (260)
T ss_pred             cCCCccchhhCCHHHhccCCcC
Confidence            1122356789999998877665


No 230
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.96  E-value=5.1e-28  Score=214.96  Aligned_cols=177  Identities=26%  Similarity=0.420  Sum_probs=146.2

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC-C---ceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD-N---LHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .++|+..+.||+|+||.||+|+... +   ..+++|.++... ....+++.+|++++++++|+|++++.+++.+.+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            3467788999999999999998752 3   368999886542 3345678999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||+++++|.+++..  ....+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++....
T Consensus        84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          84 ITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             EEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            9999999999999863  335689999999999999999999999   99999999999999999999999999986543


Q ss_pred             CCCccc---cccccccCccccccccCCcCc
Q 019842          305 SQNKNN---LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~~~---~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......   .....+..|+|||++.++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  188 (268)
T cd05063         159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFT  188 (268)
T ss_pred             cccccceeccCCCcCceecCHHHhhcCCcC
Confidence            222111   111234579999999876653


No 231
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96  E-value=2.6e-28  Score=218.90  Aligned_cols=180  Identities=30%  Similarity=0.419  Sum_probs=148.0

Q ss_pred             HHHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEE----
Q 019842          144 KLLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSA----  217 (335)
Q Consensus       144 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~----  217 (335)
                      ..+..+.++|+..+.||+|+||.||++... +++.+|+|.+.... ....++.+|+.+++++ +|+||+++++++.    
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   89 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV   89 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence            334556789999999999999999999774 57889999876432 2345688899999999 7999999999884    


Q ss_pred             -eCCeEEEEEEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 019842          218 -HDDTRFIVYELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLS  295 (335)
Q Consensus       218 -~~~~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~  295 (335)
                       .++..++||||+++++|.+++... .....+++..+..++.|+++||.|||+.   +++||||||+||++++++.+||+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEc
Confidence             345789999999999999877532 2345689999999999999999999999   99999999999999999999999


Q ss_pred             cccCceeCCCCCccccccccccCccccccccC
Q 019842          296 DFGLAITDGSQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       296 Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      |||++..............|+..|+|||++..
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (286)
T cd06638         167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC  198 (286)
T ss_pred             cCCceeecccCCCccccccCCCcccChhhhch
Confidence            99998765433322233468999999999864


No 232
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96  E-value=5.7e-28  Score=216.86  Aligned_cols=174  Identities=32%  Similarity=0.443  Sum_probs=139.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcC---CCCceeEEeeEEEeC-----C
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNI---HHPNVVCLLGYSAHD-----D  220 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~-----~  220 (335)
                      +|+..+.||+|+||.||+|+.. +++.||+|.+.....  .....+.+|+++++++   +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4777889999999999999865 688999998864322  2234566777777665   799999999988653     4


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ..+++|||++ ++|.+++... ....+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcc
Confidence            5799999998 5888877642 234589999999999999999999999   9999999999999999999999999998


Q ss_pred             eeCCCCCccccccccccCccccccccCCcCc
Q 019842          301 ITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       301 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ........ .....++..|+|||++.++.++
T Consensus       156 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~  185 (288)
T cd07863         156 RIYSCQMA-LTPVVVTLWYRAPEVLLQSTYA  185 (288)
T ss_pred             ccccCccc-CCCccccccccCchHhhCCCCC
Confidence            76543222 1234678999999999877654


No 233
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96  E-value=7.8e-28  Score=212.84  Aligned_cols=175  Identities=28%  Similarity=0.410  Sum_probs=152.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||+|++|.||+|... +++.|++|++..... .....+.+|++.+.+++|+|++++++++...+..++|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            46788899999999999999876 489999999876543 4567899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      +++++|.+++..   ...+++..++.++.|+++||+|||+ .   +++||||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          81 MDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            999999999853   2568999999999999999999999 8   99999999999999999999999999987654443


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......++..|+|||.+.++.++
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~  178 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQGESYS  178 (264)
T ss_pred             CcccceeecccccCHhhhCCCCCC
Confidence            333344678899999998877553


No 234
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96  E-value=2.5e-28  Score=226.11  Aligned_cols=173  Identities=29%  Similarity=0.366  Sum_probs=143.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC------
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD------  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  219 (335)
                      ..++|+..+.||+|+||.||++... .++.||+|++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            4568999999999999999999764 5789999998643  233456788999999999999999999988644      


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ...++||||+++ ++...+.     ..+++..+..++.|+++||+|||++   +++||||||+|||+++++.+||+|||+
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence            357999999975 5655553     2488899999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCCcCc
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++....... .....||..|+|||++.+..++
T Consensus       166 ~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~  196 (355)
T cd07874         166 ARTAGTSFM-MTPYVVTRYYRAPEVILGMGYK  196 (355)
T ss_pred             cccCCCccc-cCCccccCCccCHHHHcCCCCC
Confidence            976543322 2234689999999999877654


No 235
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=2.7e-28  Score=228.88  Aligned_cols=170  Identities=26%  Similarity=0.323  Sum_probs=144.0

Q ss_pred             hcCCcccceeeecccEEEEEEEeC---CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD---DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ..+|...+.||+|+||.||++...   .+..|++|.+...     ....+|++++++++||||+++++++...+..+++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            457999999999999999999753   3578999987532     23568999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      |++. ++|.+++.   ....+++..++.++.|++.||+|||++   +|+||||||+|||+++++.+||+|||++......
T Consensus       166 e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        166 PKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             hhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            9996 67888773   345799999999999999999999999   9999999999999999999999999998654432


Q ss_pred             Cc--cccccccccCccccccccCCcCc
Q 019842          307 NK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..  ......||..|+|||++.++.++
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~  265 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLALDPYC  265 (392)
T ss_pred             cccccccccccccCccCHhHhcCCCCC
Confidence            22  22245699999999999877664


No 236
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96  E-value=4.5e-28  Score=218.71  Aligned_cols=179  Identities=26%  Similarity=0.391  Sum_probs=146.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-----------------CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-----------------DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVC  211 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~  211 (335)
                      .++|+..+.||+|+||.||++...                 ++..||+|.+... ......++.+|++++++++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            356888999999999999998532                 2346899998654 3344568999999999999999999


Q ss_pred             EeeEEEeCCeEEEEEEecCCCCHhHHhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 019842          212 LLGYSAHDDTRFIVYELMENRSLDIQLHGPS--------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSN  283 (335)
Q Consensus       212 l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~N  283 (335)
                      +++++.+++..+++|||+++|+|.+++....        ....+++..++.++.|++.||+|||+.   +++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence            9999999999999999999999999886421        123478889999999999999999999   99999999999


Q ss_pred             EEEcCCCcEEEEcccCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          284 ILLDSKFNAKLSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       284 ill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |++++++.+||+|||+++........  .....++..|+|||...++.++
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  210 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFT  210 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCcc
Confidence            99999999999999998654332211  1122346789999998877665


No 237
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96  E-value=5.2e-28  Score=214.10  Aligned_cols=177  Identities=25%  Similarity=0.386  Sum_probs=148.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..++|+..+.||+|+||.||+|...++..+++|.+... ....+.+.+|++++++++|+||+++++++.+ +..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            45678889999999999999999888888999988643 2345678999999999999999999999887 778999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... ....+++..++.++.|++.||+|||+.   +++||||+|+||+++.++.+||+|||++........
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  157 (260)
T cd05073          82 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  157 (260)
T ss_pred             CCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence            9999999998653 345688999999999999999999998   999999999999999999999999999865533221


Q ss_pred             c-ccccccccCccccccccCCcCc
Q 019842          309 N-NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~-~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      . .....++..|+|||++..+.++
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~  181 (260)
T cd05073         158 TAREGAKFPIKWTAPEAINFGSFT  181 (260)
T ss_pred             ccccCCcccccccCHhHhccCCcC
Confidence            1 1122356789999999877655


No 238
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96  E-value=8.3e-28  Score=212.03  Aligned_cols=176  Identities=26%  Similarity=0.376  Sum_probs=149.5

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|+||.+|+++.. +++.|++|.+...  ......++.+|++++++++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4778899999999999999764 6789999998643  233456789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++... ....+++..++.++.|++.||.|||++   +++|+||+|+||++++++.++|+|||++........
T Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence            9999999888642 234688999999999999999999998   999999999999999999999999999866544333


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......|+..|+|||++.++.++
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~  179 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYN  179 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCC
Confidence            22334578899999998877653


No 239
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96  E-value=1.1e-27  Score=212.78  Aligned_cols=175  Identities=30%  Similarity=0.405  Sum_probs=145.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-----chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-----QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTR  222 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  222 (335)
                      .+|+..+.||+|+||.||+|... ++..|++|++....     ......+.+|++++++++||||+++++++.+.  +..
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            47888999999999999999764 58899999885332     22345688999999999999999999998753  578


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++++||+++++|.+++..   ...+++...+.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            999999999999998853   34588999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCCC---ccccccccccCccccccccCCcCc
Q 019842          303 DGSQN---KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       303 ~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....   .......++..|+|||.+.+..++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  187 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYG  187 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCC
Confidence            43211   111224578899999999877654


No 240
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96  E-value=7.3e-28  Score=212.59  Aligned_cols=171  Identities=29%  Similarity=0.410  Sum_probs=143.1

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEE-eCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSA-HDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lv~E~~  229 (335)
                      ++|+..+.||+|+||.||++... +..|++|.+....  ..+.+.+|+.++++++|+|++++++++. +++..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            46788899999999999999875 6789999886432  3467899999999999999999999765 456789999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++... ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+||+|||+++....... 
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-  157 (256)
T cd05082          83 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-  157 (256)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCC-
Confidence            999999998642 234589999999999999999999999   999999999999999999999999999865433221 


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ...++..|+|||++.++.++
T Consensus       158 --~~~~~~~y~aPE~~~~~~~~  177 (256)
T cd05082         158 --TGKLPVKWTAPEALREKKFS  177 (256)
T ss_pred             --CCccceeecCHHHHccCCCC
Confidence              22356789999998877654


No 241
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96  E-value=3e-28  Score=218.88  Aligned_cols=179  Identities=28%  Similarity=0.419  Sum_probs=147.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC------CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      .++|+..+.||+|+||.||+|...      ++..||+|.+.... .....++.+|+.++++++||||+++++++.+++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            467888999999999999999863      46789999986543 33456799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 019842          223 FIVYELMENRSLDIQLHGPS-------------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSN  283 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~N  283 (335)
                      ++++||+++|+|.+++....                   ....+++..++.++.|++.||+|||+.   +++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence            99999999999999986311                   123578999999999999999999999   99999999999


Q ss_pred             EEEcCCCcEEEEcccCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          284 ILLDSKFNAKLSDFGLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       284 ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |++++++.+||+|||++........  .......+..|+|||++.++.++
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYT  210 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCC
Confidence            9999999999999999865432211  11122346679999998877664


No 242
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96  E-value=2.1e-28  Score=221.19  Aligned_cols=170  Identities=29%  Similarity=0.365  Sum_probs=146.1

Q ss_pred             ccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          155 ESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      ....||+|+||.||+|... +++.||+|.+..........+.+|+.++..++|||++++++++..++..++++||+++++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            3457999999999999864 688999999865555556678899999999999999999999999999999999999999


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccccc
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKL  313 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~  313 (335)
                      |..++..    ..+++..++.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++.............
T Consensus       105 L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  177 (297)
T cd06659         105 LTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  177 (297)
T ss_pred             HHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence            9987742    4589999999999999999999999   99999999999999999999999999986544333333345


Q ss_pred             ccccCccccccccCCcCc
Q 019842          314 SGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       314 ~gt~~y~aPE~l~~~~~~  331 (335)
                      .++..|+|||++.+..++
T Consensus       178 ~~~~~y~aPE~~~~~~~~  195 (297)
T cd06659         178 VGTPYWMAPEVISRTPYG  195 (297)
T ss_pred             ecCccccCHHHHccCCCC
Confidence            689999999999876654


No 243
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96  E-value=9.1e-28  Score=217.70  Aligned_cols=175  Identities=28%  Similarity=0.396  Sum_probs=146.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|+||.||++... +++.|++|.+....   ......+.+|+++++.++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888999999999999999875 57889999886543   233457889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++++|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++.....
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            99999999999853   34689999999999999999999999   9999999999999999999999999998532110


Q ss_pred             C---------------ccccccccccCccccccccCCcCc
Q 019842          307 N---------------KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~---------------~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .               .......++..|+|||++.++.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  194 (305)
T cd05609         155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYG  194 (305)
T ss_pred             ccccccccccccchhhccccCCccCccccCchhccCCCCC
Confidence            0               001123468899999998776554


No 244
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96  E-value=7.5e-28  Score=215.28  Aligned_cols=175  Identities=27%  Similarity=0.418  Sum_probs=144.1

Q ss_pred             cCCcccceeeecccEEEEEEEeCC-Cc----eEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD-NL----HVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .+|+..+.||+|+||.||+|...+ +.    .+|+|.+.... .....++.+|++.+++++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            467778999999999999998642 32    58899886543 3345678999999999999999999999987 78899


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      |+||+++|+|.+++..  ....+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++...
T Consensus        86 v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          86 ITQLMPLGCLLDYVRN--HKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             EEecCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            9999999999999864  234589999999999999999999998   99999999999999999999999999997654


Q ss_pred             CCCcccc--ccccccCccccccccCCcCc
Q 019842          305 SQNKNNL--KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~~~~--~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......  ...++..|+|||.+.++.++
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESILHRIYT  189 (279)
T ss_pred             CcccceecCCCcccccccCHHHhhcCCcC
Confidence            3222111  11235689999998776654


No 245
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96  E-value=5.1e-28  Score=224.80  Aligned_cols=173  Identities=29%  Similarity=0.362  Sum_probs=143.5

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC------
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD------  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  219 (335)
                      ..++|...+.||+|+||.||++... .++.||||++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            3568999999999999999999764 5788999998643  233456788999999999999999999987643      


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ...|+||||+++ +|...+.     ..+++..+..++.|+++||+|||++   +|+||||||+|||+++++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence            357999999975 6666653     2478899999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCCcCc
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++....... .....+|..|+|||++.+..++
T Consensus       173 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~  203 (364)
T cd07875         173 ARTAGTSFM-MTPYVVTRYYRAPEVILGMGYK  203 (364)
T ss_pred             ccccCCCCc-ccCCcccCCcCCHHHHhCCCCC
Confidence            976543322 2234689999999999887765


No 246
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96  E-value=8.8e-28  Score=218.76  Aligned_cols=177  Identities=27%  Similarity=0.362  Sum_probs=148.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc---hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ---DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|+..+.||+|++|.||+|... +++.+|+|.+.....   ...+.+.+|++++++++|+||+++++.+.+.+..++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36888899999999999999875 488999999865432   24567899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+.+++|.+++.. .....+++..+..++.|+++||+|||+.   +++||||||+||++++++.++|+|||++......
T Consensus        81 e~~~~~~L~~~~~~-~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          81 DYCPGGELFRLLQR-QPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EecCCCCHHHHHHh-CCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            99999999998864 2345789999999999999999999999   9999999999999999999999999998543211


Q ss_pred             Cc-----------------------------cccccccccCccccccccCCcCc
Q 019842          307 NK-----------------------------NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~-----------------------------~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..                             ......|+..|+|||++.+..++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  210 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHG  210 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCC
Confidence            10                             01123578899999999877654


No 247
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96  E-value=2.4e-28  Score=218.95  Aligned_cols=172  Identities=28%  Similarity=0.420  Sum_probs=146.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|+..+.||+|+||.||+|... +++.||+|++....  ....+.+.+|+++++.++||||+++++++.+++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46788899999999999999875 58899999875432  2234568899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|..+...   ...+++..++.++.|+++||+|||+.   +++||||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence            9999999877643   23589999999999999999999999   99999999999999999999999999987654333


Q ss_pred             ccccccccccCccccccccCC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .......++..|+|||++.+.
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07846         155 EVYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             cccCcccceeeccCcHHhccc
Confidence            333334578899999998753


No 248
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96  E-value=2.9e-29  Score=238.51  Aligned_cols=171  Identities=27%  Similarity=0.383  Sum_probs=147.1

Q ss_pred             ccceeeecccEEEEEEEe-CC----CceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          155 ESNILGEGGFGCVYKAKL-DD----NLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~-~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ..++||+|+||+||+|.+ .+    .-+||+|++... ..+...++.+|+.+|.+++|||+++|+|+|..+. +.||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            467999999999999965 22    357899988543 4556789999999999999999999999999876 8899999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      |+.|+|.++++.  +...+..+..+.++.|||+||.|||++   +++||||.++|||+.+-..+||.|||+++.......
T Consensus       779 mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~  853 (1177)
T KOG1025|consen  779 MPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK  853 (1177)
T ss_pred             cccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence            999999999974  567899999999999999999999999   999999999999999999999999999987665443


Q ss_pred             ccc--ccccccCccccccccCCcCc
Q 019842          309 NNL--KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~--~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...  ...-.+.|||=|.+...+|+
T Consensus       854 ey~~~~gK~pikwmale~i~~~~~t  878 (1177)
T KOG1025|consen  854 EYSAPGGKVPIKWMALESIRIRKYT  878 (1177)
T ss_pred             cccccccccCcHHHHHHHhhccCCC
Confidence            322  22346789999999988886


No 249
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96  E-value=4.9e-28  Score=216.31  Aligned_cols=180  Identities=34%  Similarity=0.450  Sum_probs=146.7

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC------CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD------NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      .++|...+.||+|++|.||+|.+.+      +..|++|.+.... ......+.+|+.++++++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4678889999999999999998753      5678999886443 33456799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC---cEEEE
Q 019842          223 FIVYELMENRSLDIQLHGPS----HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF---NAKLS  295 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~---~~kl~  295 (335)
                      ++||||+++++|.+++....    ....+++..++.++.||+.||+|||+.   +++||||||+||++++++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence            99999999999999886432    123589999999999999999999999   999999999999998765   59999


Q ss_pred             cccCceeCCCCCcc--ccccccccCccccccccCCcCcc
Q 019842          296 DFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       296 Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      |||+++........  ......+..|+|||++.++.++.
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS  200 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCc
Confidence            99999765322111  11122356899999998877654


No 250
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96  E-value=7.5e-28  Score=214.24  Aligned_cols=176  Identities=28%  Similarity=0.411  Sum_probs=140.8

Q ss_pred             cccceeeecccEEEEEEEeCCCc---eEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC------CeE
Q 019842          154 HESNILGEGGFGCVYKAKLDDNL---HVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD------DTR  222 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~  222 (335)
                      ...+.||+|+||.||+|++.+..   .||+|.++..  .......+.+|++++++++|+||+++++++...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            45678999999999999876432   5899988643  344567789999999999999999999987542      246


Q ss_pred             EEEEEecCCCCHhHHhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          223 FIVYELMENRSLDIQLHGP---SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ++++||+++|+|.+++...   .....+++.....++.|++.||+|||++   +++||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence            8999999999998876321   1234589999999999999999999998   999999999999999999999999999


Q ss_pred             ceeCCCCCcc--ccccccccCccccccccCCcCcc
Q 019842          300 AITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       300 a~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ++........  .....++..|+|||++.+..++.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~  193 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTT  193 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcCh
Confidence            8765332211  11223567899999998776653


No 251
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96  E-value=5.9e-28  Score=213.12  Aligned_cols=171  Identities=29%  Similarity=0.397  Sum_probs=143.7

Q ss_pred             ceeeecccEEEEEEEeCC--C--ceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLDD--N--LHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|++|.||+|.+.+  +  ..||+|.+..... ...+.+.+|++.+++++|+||+++++++.+ ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998643  2  3689999976655 566789999999999999999999999988 899999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc---
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK---  308 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~---  308 (335)
                      ++|.+++..... ..+++...+.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||+++.......   
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  155 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV  155 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccccee
Confidence            999999875322 5689999999999999999999999   999999999999999999999999999866543211   


Q ss_pred             cccccccccCccccccccCCcCcc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ......++..|+|||++.+..++.
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~  179 (257)
T cd05040         156 MEEHLKVPFAWCAPESLRTRTFSH  179 (257)
T ss_pred             cccCCCCCceecCHHHhcccCcCc
Confidence            111234678899999988776643


No 252
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96  E-value=6.2e-28  Score=219.85  Aligned_cols=168  Identities=30%  Similarity=0.410  Sum_probs=134.1

Q ss_pred             cceeeecccEEEEEEEeC---CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEe--CCeEEEEEEecC
Q 019842          156 SNILGEGGFGCVYKAKLD---DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAH--DDTRFIVYELME  230 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E~~~  230 (335)
                      .+.||+|+||.||+|+..   +++.||+|.+....  ....+.+|++++++++||||+++++++..  +...++++||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999864   46789999986432  23457889999999999999999998864  456899999986


Q ss_pred             CCCHhHHhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEE----cCCCcEEEEcccCc
Q 019842          231 NRSLDIQLHGP------SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILL----DSKFNAKLSDFGLA  300 (335)
Q Consensus       231 ~g~L~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill----~~~~~~kl~Dfgla  300 (335)
                       ++|.+++...      .....+++..+..++.|++.||+|||++   +++||||||+|||+    +.++.+||+|||++
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             5777665421      1223589999999999999999999999   99999999999999    45678999999999


Q ss_pred             eeCCCCCc---cccccccccCccccccccCCc
Q 019842          301 ITDGSQNK---NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       301 ~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +.......   ......||+.|+|||++.+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  191 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGAR  191 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCC
Confidence            76543221   122346899999999997743


No 253
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96  E-value=7.7e-28  Score=217.03  Aligned_cols=174  Identities=28%  Similarity=0.397  Sum_probs=150.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      ++|...+.||+|+||.||++... ++..|++|.+........+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            57888899999999999999754 67889999987555555677899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++..    ..+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++.........
T Consensus        99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~  171 (293)
T cd06647          99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  171 (293)
T ss_pred             CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence            99999998853    3478999999999999999999999   9999999999999999999999999998655443333


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....+++.|+|||.+.++.++
T Consensus       172 ~~~~~~~~~y~~PE~~~~~~~~  193 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTRKAYG  193 (293)
T ss_pred             cccccCChhhcCchhhccCCCC
Confidence            3334688899999999877653


No 254
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96  E-value=4.6e-28  Score=222.49  Aligned_cols=182  Identities=29%  Similarity=0.399  Sum_probs=147.6

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC--------CCceEEEEEecccC-chhHHHHHHHHHHHhcC-CCCceeEEeeEE
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD--------DNLHVAVKKLDCAT-QDAGREFENEVDLLSNI-HHPNVVCLLGYS  216 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~  216 (335)
                      +....+|...+.||+|+||.||+|...        ++..||+|.+.... ....+++.+|+++++++ +|+||+++++++
T Consensus         8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (334)
T cd05100           8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC   87 (334)
T ss_pred             ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence            334457888999999999999999642        12368999886443 33457899999999999 899999999999


Q ss_pred             EeCCeEEEEEEecCCCCHhHHhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCC
Q 019842          217 AHDDTRFIVYELMENRSLDIQLHGPS-------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSN  283 (335)
Q Consensus       217 ~~~~~~~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~N  283 (335)
                      .+.+..++++||+++|+|.+++....             ....+++..++.++.|++.||+|||++   +++||||||+|
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N  164 (334)
T cd05100          88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARN  164 (334)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence            99999999999999999999986421             124588999999999999999999999   99999999999


Q ss_pred             EEEcCCCcEEEEcccCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          284 ILLDSKFNAKLSDFGLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       284 ill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |++++++.+||+|||+++........  .....++..|+|||++.++.++
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  214 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYT  214 (334)
T ss_pred             EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcC
Confidence            99999999999999999765432211  1122345679999999877654


No 255
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96  E-value=9.9e-28  Score=213.35  Aligned_cols=176  Identities=29%  Similarity=0.421  Sum_probs=143.0

Q ss_pred             CcccceeeecccEEEEEEEeCC----CceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCe-----
Q 019842          153 FHESNILGEGGFGCVYKAKLDD----NLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDT-----  221 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-----  221 (335)
                      |+..+.||+|+||.||+|.+..    +..||+|++...  .......+.+|++.++.++|+||+++++++.+.+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999998642    367999998643  23445679999999999999999999999876554     


Q ss_pred             -EEEEEEecCCCCHhHHhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          222 -RFIVYELMENRSLDIQLHGPS---HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       222 -~~lv~E~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                       .++++||+++|+|..++....   ....+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence             799999999999998875421   234689999999999999999999998   9999999999999999999999999


Q ss_pred             cCceeCCCCCcc--ccccccccCccccccccCCcCc
Q 019842          298 GLAITDGSQNKN--NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       298 gla~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |+++........  .....++..|+|||++.++.++
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  193 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT  193 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCC
Confidence            999765332211  1112346789999998776654


No 256
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96  E-value=3.2e-28  Score=218.06  Aligned_cols=172  Identities=27%  Similarity=0.414  Sum_probs=144.0

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|+||.||+|+.. +|..|++|++....  ......+.+|++++++++|+||+++++++.+.+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4677889999999999999875 68899999986432  22335678899999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++ ++|.+++..  ....+++..++.++.|+++||.|||+.   +++||||||+||++++++.+||+|||+++.......
T Consensus        81 ~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          81 CD-QDLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence            97 577777653  235689999999999999999999999   999999999999999999999999999876543332


Q ss_pred             cccccccccCccccccccCCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ......++..|+|||++.++.
T Consensus       155 ~~~~~~~~~~y~aPE~~~~~~  175 (284)
T cd07839         155 CYSAEVVTLWYRPPDVLFGAK  175 (284)
T ss_pred             CcCCCccccCCcChHHHhCCc
Confidence            223345788999999987654


No 257
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.96  E-value=5.9e-28  Score=222.56  Aligned_cols=169  Identities=29%  Similarity=0.404  Sum_probs=141.7

Q ss_pred             HhcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC------
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD------  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  219 (335)
                      ..++|...+.||+|+||.||+|.. .++..||+|++....  ......+.+|++++++++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            457899999999999999999976 467899999986432  22345678999999999999999999987543      


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ...++++|++ +++|...+.    ...+++..+..++.|++.||+|||++   +|+||||||+||++++++.+||+|||+
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCcc
Confidence            3578999988 688887764    24599999999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCC
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ++......   ....|+..|+|||++.+.
T Consensus       165 ~~~~~~~~---~~~~~t~~y~aPE~~~~~  190 (343)
T cd07878         165 ARQADDEM---TGYVATRWYRAPEIMLNW  190 (343)
T ss_pred             ceecCCCc---CCccccccccCchHhcCC
Confidence            97654322   234689999999998763


No 258
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.96  E-value=3e-28  Score=217.67  Aligned_cols=173  Identities=28%  Similarity=0.397  Sum_probs=147.2

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .|+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++..++..++|+||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            3555678999999999999764 57889999886443 344567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++..    ..+++..+..++.|+++||.|||++   +++|+||+|+||++++++.+||+|||++.........
T Consensus        85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06642          85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence            99999988742    4689999999999999999999998   9999999999999999999999999998665443333


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||++.++.++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~  179 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQSAYD  179 (277)
T ss_pred             hhcccCcccccCHHHhCcCCCc
Confidence            3334678899999999877654


No 259
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96  E-value=7.3e-28  Score=216.67  Aligned_cols=183  Identities=33%  Similarity=0.441  Sum_probs=150.8

Q ss_pred             HHHHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCC
Q 019842          143 YKLLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDD  220 (335)
Q Consensus       143 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~  220 (335)
                      ...+..++++|...+.||+|+||.||++... +++.+|+|.+.... ....++.+|+.++.++ +|||++++++++...+
T Consensus        14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~   92 (291)
T cd06639          14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD   92 (291)
T ss_pred             cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence            3445567889999999999999999999874 68899999886432 2345678899999999 8999999999987543


Q ss_pred             -----eEEEEEEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          221 -----TRFIVYELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       221 -----~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                           ..++|+||+++++|.++++.. .....+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||
T Consensus        93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl  169 (291)
T cd06639          93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKL  169 (291)
T ss_pred             ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEE
Confidence                 589999999999999887532 2345689999999999999999999998   9999999999999999999999


Q ss_pred             EcccCceeCCCCCccccccccccCccccccccCCc
Q 019842          295 SDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       295 ~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +|||++..............++..|+|||++..+.
T Consensus       170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  204 (291)
T cd06639         170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ  204 (291)
T ss_pred             eecccchhcccccccccCccCCccccChhhhcCCC
Confidence            99999866543332223346889999999986543


No 260
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96  E-value=1.2e-27  Score=213.81  Aligned_cols=173  Identities=27%  Similarity=0.391  Sum_probs=148.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4666788999999999999875 57899999886443 345677999999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++|+|.+++..    ..+++.....++.|++.||+|||+.   +++|+||+|+||++++++.++|+|||++.........
T Consensus        85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06640          85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence            99999998853    3588999999999999999999999   9999999999999999999999999999665443333


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||++.++.++
T Consensus       158 ~~~~~~~~~y~apE~~~~~~~~  179 (277)
T cd06640         158 RNTFVGTPFWMAPEVIQQSAYD  179 (277)
T ss_pred             cccccCcccccCHhHhccCCCc
Confidence            3334678899999998776654


No 261
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96  E-value=1.2e-27  Score=211.69  Aligned_cols=172  Identities=33%  Similarity=0.509  Sum_probs=147.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|+||.||+|... +++.|++|.+.....  ...+++.+|++++++++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4777889999999999999865 688999999865543  3667899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..   ...+++..+..++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence            999999999853   34588999999999999999999999   999999999999999999999999999865443222


Q ss_pred             ccc----ccccccCccccccccCCc
Q 019842          309 NNL----KLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       309 ~~~----~~~gt~~y~aPE~l~~~~  329 (335)
                      ...    ...++..|+|||++.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~  179 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGK  179 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCC
Confidence            111    245788999999998765


No 262
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.96  E-value=9.8e-28  Score=214.82  Aligned_cols=173  Identities=28%  Similarity=0.434  Sum_probs=145.4

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      +|+..+.||+|++|.||+|+.. ++..||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4778899999999999999875 588999999865432 23456788999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      + ++|.+++........+++..+..++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++.........
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~  156 (284)
T cd07836          81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT  156 (284)
T ss_pred             C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence            8 48888776433345699999999999999999999999   9999999999999999999999999998654332222


Q ss_pred             ccccccccCccccccccCC
Q 019842          310 NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....++..|++||++.++
T Consensus       157 ~~~~~~~~~y~~PE~~~~~  175 (284)
T cd07836         157 FSNEVVTLWYRAPDVLLGS  175 (284)
T ss_pred             cccccccccccChHHhcCC
Confidence            2233578899999998664


No 263
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95  E-value=1.3e-27  Score=210.12  Aligned_cols=170  Identities=33%  Similarity=0.461  Sum_probs=143.4

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHh
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLD  235 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~  235 (335)
                      +.||+|+||.||++...+++.|++|.+...... ....+.+|++++++++|+||+++++++.+.+..++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            369999999999999877999999998755433 5567999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc--ccc
Q 019842          236 IQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN--LKL  313 (335)
Q Consensus       236 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~--~~~  313 (335)
                      +++...  ...+++..++.++.+++.||+|||++   +++||||+|+||++++++.+||+|||++..........  ...
T Consensus        81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (251)
T cd05041          81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK  155 (251)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence            998642  34688999999999999999999999   99999999999999999999999999986543211111  112


Q ss_pred             ccccCccccccccCCcCc
Q 019842          314 SGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       314 ~gt~~y~aPE~l~~~~~~  331 (335)
                      ..+..|+|||.+.++.++
T Consensus       156 ~~~~~y~~PE~~~~~~~~  173 (251)
T cd05041         156 QIPIKWTAPEALNYGRYT  173 (251)
T ss_pred             cceeccCChHhhccCCCC
Confidence            235679999999877664


No 264
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95  E-value=2.2e-27  Score=212.10  Aligned_cols=173  Identities=28%  Similarity=0.396  Sum_probs=147.6

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      -|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+++..++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            4566788999999999999764 67899999886433 334567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++++|.+++..    ..+++..+..++.|++.|+.|||+.   +++|+||+|+||++++++.++|+|||++.........
T Consensus        85 ~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06641          85 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchhh
Confidence            99999988853    3589999999999999999999998   9999999999999999999999999998665443322


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||++.++.++
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~  179 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQSAYD  179 (277)
T ss_pred             hccccCCccccChhhhccCCCC
Confidence            2334678899999999876554


No 265
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95  E-value=3.6e-29  Score=231.77  Aligned_cols=182  Identities=29%  Similarity=0.388  Sum_probs=155.2

Q ss_pred             HHHHHHhcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          144 KLLEKATDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       144 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      +.+|....+....++||-|.||.||.|.|+. ...||||.++.... ...+|++|+.+|+.++|||+|+|+|+|......
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            5566656677778899999999999999875 56899999986543 568899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      |+|+|||.+|+|.++|+. .....++.-..+.++.||+.||+||..+   ++|||||.++|||+.++..+|++||||++.
T Consensus       339 YIiTEfM~yGNLLdYLRe-cnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRl  414 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRE-CNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRL  414 (1157)
T ss_pred             EEEEecccCccHHHHHHH-hchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhh
Confidence            999999999999999986 3456688888999999999999999998   999999999999999999999999999988


Q ss_pred             CCCCCcccc-ccccccCccccccccCCcC
Q 019842          303 DGSQNKNNL-KLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       303 ~~~~~~~~~-~~~gt~~y~aPE~l~~~~~  330 (335)
                      ...+.+... ...-...|.|||.+.-..+
T Consensus       415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtF  443 (1157)
T KOG4278|consen  415 MTGDTYTAHAGAKFPIKWTAPESLAYNTF  443 (1157)
T ss_pred             hcCCceecccCccCcccccCccccccccc
Confidence            754433211 1123568999999876655


No 266
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95  E-value=1.1e-27  Score=238.12  Aligned_cols=172  Identities=26%  Similarity=0.357  Sum_probs=149.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ++|.+.+.||+|+||.||+|... +++.||+|++....   ......+.+|+.+++.++|+||+++++++...+..|+||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57888999999999999999876 68899999986432   333467899999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+.+++|.+++..   ...+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~  157 (669)
T cd05610          84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNR  157 (669)
T ss_pred             eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCccccCC
Confidence            99999999998853   34588999999999999999999998   9999999999999999999999999999876554


Q ss_pred             CccccccccccCccccccccCC
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ........+|+.|++||.....
T Consensus       158 ~~~~~~~~~t~~~~~pe~~~~~  179 (669)
T cd05610         158 ELNMMDILTTPSMAKPKNDYSR  179 (669)
T ss_pred             cccccccccCccccCccccccC
Confidence            4444456789999999865443


No 267
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95  E-value=6.8e-28  Score=231.04  Aligned_cols=187  Identities=29%  Similarity=0.426  Sum_probs=159.6

Q ss_pred             cHHHHHHHhcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEe-
Q 019842          142 EYKLLEKATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAH-  218 (335)
Q Consensus       142 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-  218 (335)
                      .++.+...++.|++.++||.|.+|.||+++. ++++.+|+|++... .+...+.+.|.++++.. +|||++.++|++.. 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            3444555677889999999999999999975 46888899988643 33456678899999888 79999999999874 


Q ss_pred             ----CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          219 ----DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       219 ----~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                          ++.+|||||||.+|+.-+...+.. +..+.|..+..|++.++.||.+||.+   .++|||||-.|||+++++.+||
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence                468999999999999999987744 78899999999999999999999999   9999999999999999999999


Q ss_pred             EcccCceeCCCCCccccccccccCccccccccCCcCccc
Q 019842          295 SDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       295 ~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      .|||.+.+.+......-...||+.|||||++...+--++
T Consensus       165 vDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~  203 (953)
T KOG0587|consen  165 VDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDA  203 (953)
T ss_pred             eeeeeeeeeecccccccCcCCCcccccceeeecccCCCC
Confidence            999999887766665556789999999999966554333


No 268
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95  E-value=9.7e-28  Score=216.07  Aligned_cols=173  Identities=32%  Similarity=0.441  Sum_probs=144.4

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  225 (335)
                      ++|+..+.||+|+||.||+|... +++.+++|.++....  .....+.+|++++++++||||+++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46777889999999999999876 578899999864432  2234577899999999999999999999887  899999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +||++ ++|.+.+...  ...+++..++.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++.....
T Consensus        85 ~e~~~-~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVE-HDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcC-cCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            99997 5888887642  24689999999999999999999999   999999999999999999999999999876544


Q ss_pred             CCccccccccccCccccccccCCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .........++..|+|||.+.+..
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~  182 (293)
T cd07843         159 PLKPYTQLVVTLWYRAPELLLGAK  182 (293)
T ss_pred             CccccccccccccccCchhhcCCc
Confidence            322222335788999999987643


No 269
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95  E-value=1.5e-27  Score=212.46  Aligned_cols=171  Identities=31%  Similarity=0.514  Sum_probs=138.8

Q ss_pred             ceeeecccEEEEEEEeCC-Cc--eEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLDD-NL--HVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ++||+|+||.||+|.+.+ +.  .+++|.+... .......+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999998754 33  4688887643 234456789999999999 899999999999999999999999999


Q ss_pred             CCHhHHhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          232 RSLDIQLHGPS-------------HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       232 g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                      |+|.+++....             ....+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence            99999986421             123588999999999999999999998   99999999999999999999999999


Q ss_pred             CceeCCCCCccccccccccCccccccccCCcCc
Q 019842          299 LAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       299 la~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++....... .......+..|+|||++.+..++
T Consensus       158 l~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~  189 (270)
T cd05047         158 LSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYT  189 (270)
T ss_pred             Cccccchhh-hccCCCCccccCChHHHccCCCC
Confidence            985322111 11112345679999998776654


No 270
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.95  E-value=8.2e-28  Score=215.43  Aligned_cols=173  Identities=32%  Similarity=0.496  Sum_probs=145.3

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|++|.||+|+.. +++.||+|++....  ......+.+|++++++++||||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4778899999999999999875 68899999886432  22345788999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      ++ ++|.+++... ....+++..+..++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence            96 6888887642 345689999999999999999999999   999999999999999999999999999865543322


Q ss_pred             cccccccccCccccccccCCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ......++..|+|||++.+..
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~  176 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCK  176 (284)
T ss_pred             ccccccccccccCCeEEecCC
Confidence            222335688999999887644


No 271
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95  E-value=1.2e-27  Score=214.43  Aligned_cols=171  Identities=27%  Similarity=0.347  Sum_probs=140.9

Q ss_pred             cccceeeecccEEEEEEEe-----CCCceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEEE
Q 019842          154 HESNILGEGGFGCVYKAKL-----DDNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFIV  225 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv  225 (335)
                      +..+.||+|+||+||++..     .++..||+|.+..... .....+.+|++++++++||||+++++++...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            7788999999999988653     3577899999865432 3456788999999999999999999998764  368999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++++|.+++..    ..+++..++.++.|+++||+|||++   +++||||||+||++++++.+||+|||+++....
T Consensus        87 ~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          87 MEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             ecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            999999999998853    3589999999999999999999999   999999999999999999999999999865433


Q ss_pred             CCcc---ccccccccCccccccccCCcCc
Q 019842          306 QNKN---NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~---~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....   .....++..|+|||.+.++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~  188 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKENKFS  188 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhcccCCC
Confidence            2211   1122356679999999876654


No 272
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.95  E-value=1.3e-27  Score=211.28  Aligned_cols=167  Identities=28%  Similarity=0.405  Sum_probs=137.8

Q ss_pred             eeeecccEEEEEEEe---CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          158 ILGEGGFGCVYKAKL---DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      .||+|+||.||+|.+   .++..+|+|.++...  ....+++.+|+.++++++|+||+++++++.. +..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            589999999999965   357889999886443  3345679999999999999999999999864 5678999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc---
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN---  309 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~---  309 (335)
                      +|.+++..   ...+++..+..++.|++.||+|||++   +++||||||+||++++++.+||+|||++.........   
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  154 (257)
T cd05116          81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA  154 (257)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence            99999853   34689999999999999999999999   9999999999999999999999999998655432211   


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++..|+|||.+.++.++
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05116         155 KTHGKWPVKWYAPECMNYYKFS  176 (257)
T ss_pred             cCCCCCCccccCHhHhccCCcC
Confidence            1122345789999998776554


No 273
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95  E-value=8.5e-28  Score=213.83  Aligned_cols=167  Identities=25%  Similarity=0.390  Sum_probs=135.3

Q ss_pred             eeeecccEEEEEEEeCCC---ceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          158 ILGEGGFGCVYKAKLDDN---LHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      .||+|+||.||+|+..++   ..+++|.+.... ....+.+.+|+..++.++||||+++++.+.+....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            599999999999975443   345667665432 3445789999999999999999999999999999999999999999


Q ss_pred             HhHHhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC--ccc
Q 019842          234 LDIQLHGPS-HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN--KNN  310 (335)
Q Consensus       234 L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~--~~~  310 (335)
                      |.++++... .....++.....++.|+++||+|||+.   +++||||||+|||+++++.+||+|||++.......  ...
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            999986422 224567778889999999999999998   99999999999999999999999999985422211  111


Q ss_pred             cccccccCccccccccC
Q 019842          311 LKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~  327 (335)
                      ....++..|+|||++..
T Consensus       159 ~~~~~~~~y~aPE~~~~  175 (268)
T cd05086         159 DDKCVPLRWLAPELVGE  175 (268)
T ss_pred             cCCcCcccccCchhccc
Confidence            23457889999999854


No 274
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.95  E-value=1.1e-27  Score=214.72  Aligned_cols=172  Identities=27%  Similarity=0.393  Sum_probs=146.2

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|+..+.||+|++|.||+|... +++.|++|+++..  .......+.+|++++++++|+||+++++++.+++..+++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36788899999999999999876 5789999988643  23345678999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++++.+.....   ....+++..++.++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            999877766553   234589999999999999999999999   99999999999999999999999999986654433


Q ss_pred             c-cccccccccCccccccccCC
Q 019842          308 K-NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~-~~~~~~gt~~y~aPE~l~~~  328 (335)
                      . ......++..|+|||++.+.
T Consensus       155 ~~~~~~~~~~~~~~~PE~~~~~  176 (288)
T cd07833         155 ASPLTDYVATRWYRAPELLVGD  176 (288)
T ss_pred             cccccCcccccCCcCCchhcCC
Confidence            2 22234678899999999876


No 275
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.95  E-value=1e-27  Score=212.75  Aligned_cols=174  Identities=28%  Similarity=0.477  Sum_probs=145.8

Q ss_pred             CCcccceeeecccEEEEEEEe-CCCceEEEEEecccC------chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT------QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      +|+..+.||+|++|.||+|.. .+++.||+|.+....      ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            467788999999999999976 568899999886432      1234678999999999999999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-cEEEEcccCceeC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-NAKLSDFGLAITD  303 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfgla~~~  303 (335)
                      |+||+++++|.+++..   ...+++..+..++.|++.||.|||++   +++||||+|+||+++.++ .+||+|||++...
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            9999999999998853   34689999999999999999999999   999999999999998775 6999999998654


Q ss_pred             CCCCc----cccccccccCccccccccCCcCc
Q 019842          304 GSQNK----NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       304 ~~~~~----~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....    ......++..|+|||++.+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~  186 (268)
T cd06630         155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYG  186 (268)
T ss_pred             ccccccCCccccccccccceeCHhHhccCCCC
Confidence            33211    11223578899999998776654


No 276
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95  E-value=1.5e-27  Score=210.35  Aligned_cols=175  Identities=23%  Similarity=0.373  Sum_probs=146.9

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      .+|+..+.||+|+||.||+|.+.++..+|+|.+..... ...++.+|++++++++|||++++++++......++|+||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            35677889999999999999887788999998864322 34578999999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc-
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN-  309 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-  309 (335)
                      +++|.+++..  ....+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++......... 
T Consensus        83 ~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~  157 (256)
T cd05112          83 HGCLSDYLRA--QRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS  157 (256)
T ss_pred             CCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence            9999998864  234688999999999999999999999   9999999999999999999999999998654332211 


Q ss_pred             ccccccccCccccccccCCcCc
Q 019842          310 NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .....++.+|+|||++.++.++
T Consensus       158 ~~~~~~~~~~~aPe~~~~~~~~  179 (256)
T cd05112         158 STGTKFPVKWSSPEVFSFSKYS  179 (256)
T ss_pred             cCCCccchhhcCHhHhccCCcC
Confidence            1122346789999999876654


No 277
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95  E-value=8.3e-28  Score=215.64  Aligned_cols=174  Identities=26%  Similarity=0.376  Sum_probs=147.2

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||+|+||+||++... +++.||+|.+.... .....++.+|+++++.++||||+++++++...+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            46777889999999999999865 58889999875443 34457899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..   ...+++..+..++.+++.||.|||+..  +++||||+|+||++++++.++|+|||++........
T Consensus        85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~  159 (284)
T cd06620          85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA  159 (284)
T ss_pred             CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence            999999988853   346899999999999999999999732  799999999999999999999999999854322211


Q ss_pred             cccccccccCccccccccCCcCc
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ....|+..|+|||++.++.++
T Consensus       160 --~~~~~~~~~~aPE~~~~~~~~  180 (284)
T cd06620         160 --DTFVGTSTYMSPERIQGGKYT  180 (284)
T ss_pred             --CccccCcccCCHHHHccCCCC
Confidence              234689999999999876553


No 278
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.95  E-value=1.8e-27  Score=212.46  Aligned_cols=171  Identities=28%  Similarity=0.462  Sum_probs=147.4

Q ss_pred             CCcccceeeecccEEEEEEEe-CCCceEEEEEeccc-CchhHHHHHHHHHHHhcCC---CCceeEEeeEEEeCCeEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA-TQDAGREFENEVDLLSNIH---HPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~  226 (335)
                      .|+..+.||+|+||.||+|.. .++..|++|.+... ......++.+|+.++++++   |||++++++++.+++..++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            466778899999999999986 46889999998654 3344567889999999997   999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++++|.+++..    ..+++..++.++.|++.||.|||+.   +++||||+|+||++++++.++|+|||++......
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999998853    2689999999999999999999999   9999999999999999999999999999765544


Q ss_pred             CccccccccccCccccccccCCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ........|+..|+|||.+.++.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06917         155 SSKRSTFVGTPYWMAPEVITEGK  177 (277)
T ss_pred             ccccccccCCcceeCHHHhccCC
Confidence            43333456889999999987654


No 279
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95  E-value=1.5e-27  Score=212.33  Aligned_cols=176  Identities=26%  Similarity=0.357  Sum_probs=144.1

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC----CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD----NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      .++|...+.||+|+||.||+|...+    ...|++|...... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            3467788999999999999998643    3468999886544 4455689999999999999999999999876 55789


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||+++|+|.+++..  ....+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||+++...
T Consensus        84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056          84 VMELAPLGELRSYLQV--NKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             EEEcCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence            9999999999999864  234689999999999999999999998   99999999999999999999999999986543


Q ss_pred             CCCc-cccccccccCccccccccCCcCc
Q 019842          305 SQNK-NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .... ......++..|+|||.+....++
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~  186 (270)
T cd05056         159 DESYYKASKGKLPIKWMAPESINFRRFT  186 (270)
T ss_pred             cccceecCCCCccccccChhhhccCCCC
Confidence            3221 11122345689999998766553


No 280
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95  E-value=1.7e-27  Score=213.37  Aligned_cols=172  Identities=28%  Similarity=0.351  Sum_probs=146.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|++|.||+|... ++..|++|++....  ......+.+|+.++++++||||+++++++.+++..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4677889999999999999874 68899999986543  33456799999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      + +++|.+++...  ...+++..++.++.|+++||+|||+.   +++|+||+|+||++++++.++|+|||++........
T Consensus        81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence            9 99999988642  35699999999999999999999999   999999999999999999999999999866543321


Q ss_pred             -cccccccccCccccccccCCc
Q 019842          309 -NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       309 -~~~~~~gt~~y~aPE~l~~~~  329 (335)
                       ......++..|+|||++.+..
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~  176 (286)
T cd07832         155 RLYSHQVATRWYRAPELLYGAR  176 (286)
T ss_pred             CccccccCcccccCceeeeccc
Confidence             122346889999999986543


No 281
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95  E-value=2.3e-27  Score=215.98  Aligned_cols=168  Identities=30%  Similarity=0.411  Sum_probs=133.6

Q ss_pred             cceeeecccEEEEEEEeC---CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEe--CCeEEEEEEecC
Q 019842          156 SNILGEGGFGCVYKAKLD---DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAH--DDTRFIVYELME  230 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~E~~~  230 (335)
                      ...||+|+||.||+|+..   ++..||+|.+....  ....+.+|++++++++||||+++++++..  +...++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            468999999999999865   35789999886432  23467899999999999999999998854  457899999987


Q ss_pred             CCCHhHHhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEE----cCCCcEEEEcccCc
Q 019842          231 NRSLDIQLHGP------SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILL----DSKFNAKLSDFGLA  300 (335)
Q Consensus       231 ~g~L~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill----~~~~~~kl~Dfgla  300 (335)
                      + +|.+++...      .....+++..+..++.|++.||+|||+.   +++||||||+|||+    ++++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            4 666655321      1233589999999999999999999999   99999999999999    56678999999999


Q ss_pred             eeCCCCCc---cccccccccCccccccccCCc
Q 019842          301 ITDGSQNK---NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       301 ~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +.......   ......+|..|+|||++.+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  191 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGAR  191 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCC
Confidence            76543221   122346799999999987643


No 282
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95  E-value=1.9e-27  Score=210.17  Aligned_cols=177  Identities=29%  Similarity=0.406  Sum_probs=147.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEe--CCeEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAH--DDTRFIVY  226 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lv~  226 (335)
                      +|+..+.||.|+||.||++... ++..+++|.+...  .....+++.+|++++++++|+||+++++++..  ....+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4677889999999999999764 6788999988643  33445678899999999999999999998764  35689999


Q ss_pred             EecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          227 ELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLH-----EHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       227 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH-----~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ||+++++|.+++... .....+++..++.++.|++.||.|||     +.   +++||||+|+||++++++.+||+|||++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence            999999999888642 23467999999999999999999999     66   9999999999999999999999999999


Q ss_pred             eeCCCCCccccccccccCccccccccCCcCc
Q 019842          301 ITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       301 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..............++..|+|||++.++.++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~  188 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYD  188 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCCC
Confidence            7665443323344689999999999887654


No 283
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95  E-value=1.7e-27  Score=210.85  Aligned_cols=170  Identities=29%  Similarity=0.478  Sum_probs=137.4

Q ss_pred             ceeeecccEEEEEEEeC----CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEe-CCeEEEEEEecC
Q 019842          157 NILGEGGFGCVYKAKLD----DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAH-DDTRFIVYELME  230 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lv~E~~~  230 (335)
                      +.||+|+||.||+|.+.    ++..||+|++... .....+.+.+|+.+++.++||||+++++++.. ++..++++||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999753    2457999988543 33445678899999999999999999998764 456899999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--  308 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--  308 (335)
                      +|+|.+++...  ...+++..++.++.|+++||.|||+.   +++||||||+|||+++++.+||+|||+++.......  
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~  155 (262)
T cd05058          81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS  155 (262)
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence            99999998642  34567888899999999999999998   999999999999999999999999999865432111  


Q ss_pred             --cccccccccCccccccccCCcCc
Q 019842          309 --NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 --~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ......++..|+|||.+.++.++
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~  180 (262)
T cd05058         156 VHNHTGAKLPVKWMALESLQTQKFT  180 (262)
T ss_pred             ecccccCcCCccccChhHhccCccc
Confidence              11122456789999998776654


No 284
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95  E-value=2.2e-27  Score=213.05  Aligned_cols=178  Identities=30%  Similarity=0.410  Sum_probs=152.0

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .++.|+..+.||+|++|.||+|..+ ++..+++|.+..... ....+.+|++.+++++|+|++++++++...+..++++|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4566778889999999999999886 688999999975544 56678999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|.+++....  ..+++..++.++.|++.||.|||+.   +++|+||+|+||++++++.++|+|||++.......
T Consensus        96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  170 (286)
T cd06614          96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK  170 (286)
T ss_pred             ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence            999999999986422  4799999999999999999999998   99999999999999999999999999875443322


Q ss_pred             ccccccccccCccccccccCCcCcc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .......++..|+|||.+.+..++.
T Consensus       171 ~~~~~~~~~~~y~~PE~~~~~~~~~  195 (286)
T cd06614         171 SKRNSVVGTPYWMAPEVIKRKDYGP  195 (286)
T ss_pred             hhhccccCCcccCCHhHhcCCCCCC
Confidence            2222345788999999988776543


No 285
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95  E-value=2.7e-27  Score=212.53  Aligned_cols=173  Identities=31%  Similarity=0.403  Sum_probs=148.0

Q ss_pred             CCcccceeeecccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          152 SFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      +|...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.+++.++|+|++++++++...+..++++||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            344467899999999999986 4688999999876555556678999999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +++|.+++..    ..+++..+..++.|++.||+|||++   +++||||+|+||++++++.++|+|||++..........
T Consensus       100 ~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~  172 (285)
T cd06648         100 GGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR  172 (285)
T ss_pred             CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc
Confidence            9999998853    4589999999999999999999999   99999999999999999999999999886543322222


Q ss_pred             cccccccCccccccccCCcCc
Q 019842          311 LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....|+..|+|||.+.++.++
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~  193 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYG  193 (285)
T ss_pred             ccccCCccccCHHHhcCCCCC
Confidence            234688999999999877654


No 286
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.95  E-value=2.9e-27  Score=209.50  Aligned_cols=175  Identities=29%  Similarity=0.417  Sum_probs=149.3

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||.|+||+||+|... ++..+++|++.... ....+.+.+|++.++.++|+|++++++.+..++..++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            47888999999999999999864 67889999986443 23567899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++........+++..+..++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            99999999986533335689999999999999999999999   999999999999999999999999999855433221


Q ss_pred             c----ccccccccCccccccccCC
Q 019842          309 N----NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 ~----~~~~~gt~~y~aPE~l~~~  328 (335)
                      .    .....|+..|+|||++..+
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~  181 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQV  181 (267)
T ss_pred             ccccccccccCChhhcChHHHccc
Confidence            1    1234588999999998776


No 287
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95  E-value=1.1e-27  Score=212.95  Aligned_cols=176  Identities=33%  Similarity=0.486  Sum_probs=148.4

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCC------
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDD------  220 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~------  220 (335)
                      ++++|+..+.||+|++|.||+|... +++.+++|.+..... ...++.+|+++++++ +|+||+++++++.+..      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            5678999999999999999999875 578899998865433 446789999999999 7999999999997644      


Q ss_pred             eEEEEEEecCCCCHhHHhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          221 TRFIVYELMENRSLDIQLHGPS-HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ..++||||+++++|.+++.... ....+++..+..++.|+++||+|||+.   +++||||+|+||++++++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcc
Confidence            4899999999999998876422 246789999999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCC
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      +..............++..|+|||++...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  188 (275)
T cd06608         160 SAQLDSTLGRRNTFIGTPYWMAPEVIACD  188 (275)
T ss_pred             ceecccchhhhcCccccccccCHhHhccc
Confidence            86654333333344688999999998654


No 288
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.95  E-value=2.5e-27  Score=211.92  Aligned_cols=176  Identities=27%  Similarity=0.395  Sum_probs=146.2

Q ss_pred             cCCcccceeeecccEEEEEEEeC-----CCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEe--CCeE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-----DNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAH--DDTR  222 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~  222 (335)
                      .+|+..+.||+|+||.||+|+++     ++..+|+|.+...... ....+.+|++++++++|+||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            35666789999999999999864     3678999999755443 46789999999999999999999999987  5578


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      +++|||+++++|.+++...  ...+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            9999999999999998642  33699999999999999999999999   999999999999999999999999999866


Q ss_pred             CCCCCcc---ccccccccCccccccccCCcCc
Q 019842          303 DGSQNKN---NLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       303 ~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......   .....++..|+|||.+.+..++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~  190 (284)
T cd05038         159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFS  190 (284)
T ss_pred             cccCCcceeccCCCCCcccccCcHHHccCCCC
Confidence            5422111   1112345679999999877654


No 289
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.95  E-value=3.9e-28  Score=214.75  Aligned_cols=164  Identities=24%  Similarity=0.364  Sum_probs=138.0

Q ss_pred             ceeeecccEEEEEEEeCC--------CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKLDD--------NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +.||+|+||.||+|....        ...|++|.+........+++.+|+.+++.++|||++++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            369999999999997642        234888888655555567889999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc--------EEEEcccCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN--------AKLSDFGLA  300 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~--------~kl~Dfgla  300 (335)
                      +++|+|..++...  ...+++..++.++.|++.||+|||+.   +++||||||+||++++++.        ++++|||++
T Consensus        81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccc
Confidence            9999999998642  34689999999999999999999999   9999999999999988765        699999988


Q ss_pred             eeCCCCCccccccccccCccccccccCCc
Q 019842          301 ITDGSQNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       301 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ......    ....++..|+|||++.++.
T Consensus       156 ~~~~~~----~~~~~~~~y~aPE~~~~~~  180 (258)
T cd05078         156 ITVLPK----EILLERIPWVPPECIENPQ  180 (258)
T ss_pred             cccCCc----hhccccCCccCchhccCCC
Confidence            554322    2245788999999997643


No 290
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95  E-value=1.4e-27  Score=216.40  Aligned_cols=175  Identities=30%  Similarity=0.432  Sum_probs=141.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCc----eEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNL----HVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ++|+..+.||+|+||.||+|.+. ++.    .||+|.+..... ....++.+|+.++++++||||++++|+|... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            46777889999999999999763 343    478888765432 3345789999999999999999999999764 4678


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ++||+++|+|.+++..  ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+||+|||+++...
T Consensus        86 v~e~~~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          86 VTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             eehhcCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccccc
Confidence            9999999999998863  334689999999999999999999999   99999999999999999999999999996543


Q ss_pred             CCCc--cccccccccCccccccccCCcCc
Q 019842          305 SQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....  ......++..|+|||++.+..++
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  189 (303)
T cd05110         161 GDEKEYNADGGKMPIKWMALECIHYRKFT  189 (303)
T ss_pred             CcccccccCCCccccccCCHHHhccCCCC
Confidence            2221  11122356789999998876654


No 291
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95  E-value=3.3e-27  Score=209.41  Aligned_cols=175  Identities=30%  Similarity=0.409  Sum_probs=145.1

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc-----CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-----TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTR  222 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~  222 (335)
                      .+|...+.||+|+||.||+|... ++..|++|.+...     .......+.+|++++++++|+||+++++++.+.  +..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47888999999999999999864 5889999987422     233456789999999999999999999998764  468


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++++||+++++|.+++..   ...+++.....++.|++.||.|||+.   +++||||+|+||++++++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence            899999999999998853   24588999999999999999999999   999999999999999999999999999865


Q ss_pred             CCCC---CccccccccccCccccccccCCcCc
Q 019842          303 DGSQ---NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       303 ~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....   ........++..|+|||++.+..++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  187 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYG  187 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCC
Confidence            4321   1111234588999999999876554


No 292
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95  E-value=2.9e-27  Score=208.30  Aligned_cols=174  Identities=34%  Similarity=0.492  Sum_probs=145.7

Q ss_pred             cccceeeecccEEEEEEEeCC-----CceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          154 HESNILGEGGFGCVYKAKLDD-----NLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      +..+.||+|+||.||++...+     +..||+|.+...... ..+.+.+|++.+.+++|+||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999998754     478999999755433 56789999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|.+++.... ...+++..+..++.|++.||+|||+.   +++||||+|+||++++++.++|+|||++.......
T Consensus        82 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       82 YMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             ccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            999999999986422 12289999999999999999999999   99999999999999999999999999986654332


Q ss_pred             cccc-ccccccCccccccccCCcCc
Q 019842          308 KNNL-KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~-~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .... ...++..|+|||.+.++.++
T Consensus       158 ~~~~~~~~~~~~y~~Pe~~~~~~~~  182 (258)
T smart00219      158 YYKKKGGKLPIRWMAPESLKDGKFT  182 (258)
T ss_pred             ccccccCCCcccccChHHhccCCCC
Confidence            2111 12367899999998665554


No 293
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95  E-value=7.4e-28  Score=212.71  Aligned_cols=172  Identities=27%  Similarity=0.396  Sum_probs=148.3

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      +|+..+.||.|+||.||+|... ++..||+|.+....   ....+.+.+|++++++++||||+++++++.+.+..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4778899999999999999876 58899999986432   2346789999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |+++++|.+++..   ...+++..+..++.|+++||.|||++   +++|+||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  154 (258)
T cd05578          81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT  154 (258)
T ss_pred             CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence            9999999999853   25789999999999999999999999   99999999999999999999999999986554332


Q ss_pred             ccccccccccCccccccccCCcC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                       ......|+..|+|||.+.+..+
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~  176 (258)
T cd05578         155 -LTTSTSGTPGYMAPEVLCRQGY  176 (258)
T ss_pred             -cccccCCChhhcCHHHHcccCC
Confidence             2223468889999999877654


No 294
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95  E-value=3.1e-27  Score=211.48  Aligned_cols=173  Identities=28%  Similarity=0.416  Sum_probs=140.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHH-HhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDL-LSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|+..+.||+|+||.||+|+.. +|+.||+|+++... .....++..|+.. ++.++||||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888899999999999999875 58999999986542 2334456667665 566789999999999999999999999


Q ss_pred             ecCCCCHhHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          228 LMENRSLDIQLHG-PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       228 ~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      |++ |+|.+++.. ......+++..++.++.|++.||+|||+++  +++||||||+||++++++.+||+|||++......
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence            997 788777653 223457899999999999999999999853  7999999999999999999999999998754332


Q ss_pred             CccccccccccCccccccccC
Q 019842          307 NKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      .. .....++..|+|||++.+
T Consensus       158 ~~-~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         158 VA-KTIDAGCKPYMAPERINP  177 (283)
T ss_pred             cc-cccccCCccccChhhcCC
Confidence            21 122457889999998865


No 295
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95  E-value=2.8e-27  Score=216.68  Aligned_cols=169  Identities=18%  Similarity=0.241  Sum_probs=138.2

Q ss_pred             cceeeec--ccEEEEEEEe-CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          156 SNILGEG--GFGCVYKAKL-DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       156 ~~~ig~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      .++||+|  +|++||++.. .+|+.||+|+++...  ......+.+|+++++.++||||+++++++..++..++||||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            5679999  6899999976 468999999986542  3344568889999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc--
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK--  308 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~--  308 (335)
                      +|+|.+++... ....+++..++.++.|++.||+|||+.   +++||||||+|||++.++.++++||+..........  
T Consensus        83 ~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          83 YGSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             CCcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence            99999988542 234589999999999999999999999   999999999999999999999999986532211100  


Q ss_pred             -----cccccccccCccccccccCC
Q 019842          309 -----NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 -----~~~~~~gt~~y~aPE~l~~~  328 (335)
                           ......++..|+|||++.++
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~  183 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQN  183 (327)
T ss_pred             cccccccccccceecccChHHhhcc
Confidence                 01122467789999999763


No 296
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.95  E-value=3.5e-27  Score=208.32  Aligned_cols=168  Identities=29%  Similarity=0.411  Sum_probs=138.3

Q ss_pred             ceeeecccEEEEEEEeCC----CceEEEEEecccCc-hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLDD----NLHVAVKKLDCATQ-DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|....    +..+|+|.+..... ...+++.+|++++++++|+||+++++++.. +..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence            469999999999997532    26899999875543 345679999999999999999999998764 568999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc-
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN-  310 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-  310 (335)
                      |+|.+++..   ...+++..++.++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++......... 
T Consensus        80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~  153 (257)
T cd05060          80 GPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR  153 (257)
T ss_pred             CcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence            999999964   23689999999999999999999998   99999999999999999999999999986553322211 


Q ss_pred             --cccccccCccccccccCCcCc
Q 019842          311 --LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       311 --~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ....++..|+|||.+.++.++
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05060         154 ATTAGRWPLKWYAPECINYGKFS  176 (257)
T ss_pred             cccCccccccccCHHHhcCCCCC
Confidence              111234679999999877665


No 297
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=3.9e-28  Score=220.76  Aligned_cols=175  Identities=27%  Similarity=0.356  Sum_probs=151.8

Q ss_pred             cCCcccceeeecccEEEEEEEe-CCCceEEEEEecccCch--hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCATQD--AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .-|...+.||+|.|+.|-.|++ -+|..||||+++....+  ....+.+|++.|+.++|||||+||.+...+..+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            3466678899999999999975 37999999999766443  34578999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEc-CCCcEEEEcccCceeCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLD-SKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~-~~~~~kl~Dfgla~~~~~~  306 (335)
                      +-++|+|++++-  ++...+.+..+.+++.||+.|+.|+|+.   .+|||||||+||.+- +-|-+||.|||++..+.+.
T Consensus        98 LGD~GDl~DyIm--KHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   98 LGDGGDLFDYIM--KHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             ecCCchHHHHHH--hhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            999999999986  4556799999999999999999999999   999999999999775 5688999999999766554


Q ss_pred             CccccccccccCccccccccCCcCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..- ...+|++.|-|||.+.+..|.
T Consensus       173 ~kL-~TsCGSLAYSAPEILLGDsYD  196 (864)
T KOG4717|consen  173 KKL-TTSCGSLAYSAPEILLGDSYD  196 (864)
T ss_pred             chh-hcccchhhccCchhhhcCccC
Confidence            443 346899999999999998775


No 298
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.95  E-value=1.8e-27  Score=209.85  Aligned_cols=170  Identities=32%  Similarity=0.505  Sum_probs=142.4

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      ++|...+.||+|+||.||++.. +++.||+|.+....  ....+.+|+.++++++|||++++++++..+ ..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            4577889999999999999975 56789999986432  345789999999999999999999998764 5799999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +++|.+++... ....+++..++.++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++........  
T Consensus        82 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~--  155 (254)
T cd05083          82 KGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD--  155 (254)
T ss_pred             CCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCC--
Confidence            99999998653 234689999999999999999999998   999999999999999999999999999865432211  


Q ss_pred             cccccccCccccccccCCcCc
Q 019842          311 LKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~~  331 (335)
                       ....+..|+|||++.++.++
T Consensus       156 -~~~~~~~y~~pe~~~~~~~~  175 (254)
T cd05083         156 -NSKLPVKWTAPEALKHKKFS  175 (254)
T ss_pred             -CCCCCceecCHHHhccCCcC
Confidence             12345689999999877664


No 299
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.95  E-value=4e-27  Score=207.45  Aligned_cols=175  Identities=26%  Similarity=0.403  Sum_probs=147.6

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|++|.||++... +++.+|+|.+...  .......+.+|++++++++|||++++++.+..++..++|+||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4777899999999999999764 6788999998644  234457799999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Dfgla~~~~~~~  307 (335)
                      +++++|.+++... ....+++..++.++.|+++||+|||++   +++||||+|+||+++++ +.+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence            9999999998642 245689999999999999999999999   99999999999999865 568999999997654332


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .. ....++..|+|||.+.+..++
T Consensus       157 ~~-~~~~~~~~y~aPE~~~~~~~~  179 (256)
T cd08220         157 KA-YTVVGTPCYISPELCEGKPYN  179 (256)
T ss_pred             cc-cccccCCcccCchhccCCCCC
Confidence            21 234678899999999876543


No 300
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.95  E-value=6e-27  Score=205.84  Aligned_cols=173  Identities=32%  Similarity=0.487  Sum_probs=149.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|++|.||+|... +++.|++|.+.....  .....+.+|++++++++|+|++++++++.+++..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4677889999999999999765 578999999965543  4567899999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.   +++||||+|+||++++++.++|+|||++........
T Consensus        81 ~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          81 AENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             CCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence            999999998853   25789999999999999999999999   999999999999999999999999999976654443


Q ss_pred             cccccccccCccccccccCCcC
Q 019842          309 NNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ......++..|+|||...+..+
T Consensus       155 ~~~~~~~~~~y~~pe~~~~~~~  176 (254)
T cd06627         155 DDASVVGTPYWMAPEVIEMSGA  176 (254)
T ss_pred             cccccccchhhcCHhhhcCCCC
Confidence            3334568899999999876553


No 301
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.95  E-value=3.7e-27  Score=209.86  Aligned_cols=172  Identities=26%  Similarity=0.443  Sum_probs=143.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc----------hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ----------DAGREFENEVDLLSNIHHPNVVCLLGYSAHDD  220 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~  220 (335)
                      +|...+.||+|+||.||+|... +++.||+|.++....          ...+.+.+|++++++++|+|++++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4667789999999999999754 688999998753211          11346788999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ..++|+||+++++|.+++..   ...+++..+..++.|++.||.|||+.   +++||||+|+||++++++.++|+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence            99999999999999999864   25689999999999999999999998   9999999999999999999999999998


Q ss_pred             eeCCCCC--ccccccccccCccccccccCCc
Q 019842          301 ITDGSQN--KNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       301 ~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .......  .......++..|+|||.+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  186 (272)
T cd06629         156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS  186 (272)
T ss_pred             ccccccccccccccccCCccccCHHHhcccc
Confidence            6543221  1122345788999999987654


No 302
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95  E-value=3.6e-27  Score=212.42  Aligned_cols=174  Identities=29%  Similarity=0.401  Sum_probs=142.2

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCe-----
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDT-----  221 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~-----  221 (335)
                      ++|+..+.||+|+||.||+|... +++.||+|.+....  ......+.+|++++++++ |+||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888999999999999999875 68899999876432  223457889999999995 6999999999987665     


Q ss_pred             EEEEEEecCCCCHhHHhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEccc
Q 019842          222 RFIVYELMENRSLDIQLHGPSH--GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFG  298 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfg  298 (335)
                      .|+||||+++ +|.+++.....  ...+++..++.++.||++||+|||+.   +++||||+|+||++++ ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999985 78877754222  35689999999999999999999999   9999999999999999 8999999999


Q ss_pred             CceeCCCCCccccccccccCccccccccCC
Q 019842          299 LAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       299 la~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      +++.............+++.|+|||++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  186 (295)
T cd07837         157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGS  186 (295)
T ss_pred             cceecCCCccccCCcccccCCCChHHhhCC
Confidence            987543322222233568899999998654


No 303
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.95  E-value=3.7e-27  Score=209.52  Aligned_cols=177  Identities=27%  Similarity=0.473  Sum_probs=145.9

Q ss_pred             CCcccceeeecccEEEEEEEeCC--CceEEEEEeccc----------CchhHHHHHHHHHHHhc-CCCCceeEEeeEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLDD--NLHVAVKKLDCA----------TQDAGREFENEVDLLSN-IHHPNVVCLLGYSAH  218 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~  218 (335)
                      +|+..+.||+|+||.||+|....  ++.+|+|.+...          ......++.+|+.++.+ ++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            46778899999999999998765  678999987532          22234567788888875 799999999999999


Q ss_pred             CCeEEEEEEecCCCCHhHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          219 DDTRFIVYELMENRSLDIQLHG-PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       219 ~~~~~lv~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                      ++..+++|||+++++|.+.+.. ......+++..++.++.|++.||.|||+..  +++||||+|+||++++++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence            9999999999999999888743 123456999999999999999999999631  7999999999999999999999999


Q ss_pred             cCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          298 GLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       298 gla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |++....... ......++..|+|||.+.++.++
T Consensus       159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~  191 (269)
T cd08528         159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYG  191 (269)
T ss_pred             cceeeccccc-ccccccCcccCcChhhhcCCCCc
Confidence            9997654433 22344688999999999887664


No 304
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95  E-value=1.1e-27  Score=212.11  Aligned_cols=174  Identities=31%  Similarity=0.417  Sum_probs=148.8

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++|+..+.||+|++|.||++... +++.+++|.+.... .....++.+|++++++++||||+++++.+..++..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35677889999999999999876 58899999986553 34556789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      +++++|.+++....  ..+++.....++.|+++||+|||+ .   +++||||+|+||++++++.+||+|||.+.......
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence            99999999986422  678999999999999999999999 7   99999999999999999999999999985543221


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..  ...++..|+|||.+.+..++
T Consensus       156 ~~--~~~~~~~y~~PE~~~~~~~~  177 (265)
T cd06605         156 AK--TFVGTSSYMAPERIQGNDYS  177 (265)
T ss_pred             hh--cccCChhccCHHHHcCCCCC
Confidence            11  14688899999999777554


No 305
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=5.9e-29  Score=243.50  Aligned_cols=179  Identities=24%  Similarity=0.281  Sum_probs=154.4

Q ss_pred             HHHHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEe
Q 019842          143 YKLLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAH  218 (335)
Q Consensus       143 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~  218 (335)
                      .+.+....++|.+.++||+|+||.|..++.. +++.+|+|++...   .......|..|.++|..-+.+-|++|+-.|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            3445556789999999999999999999875 5788999998653   33455679999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          219 DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       219 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                      .+++|+|||||+||+|-..+..   ...+++..+..++..|.-||.-||+.   |+|||||||+|||||..|.+||+|||
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk---~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSK---FDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhh---cCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence            9999999999999999998853   33799999999999999999999999   99999999999999999999999999


Q ss_pred             CceeCC-CCCccccccccccCccccccccC
Q 019842          299 LAITDG-SQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       299 la~~~~-~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      .+.... +........+|||.|++||++..
T Consensus       221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs  250 (1317)
T KOG0612|consen  221 SCLKMDADGTVRSSVAVGTPDYISPEVLQS  250 (1317)
T ss_pred             hHHhcCCCCcEEeccccCCCCccCHHHHHh
Confidence            885544 33334445679999999999954


No 306
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.95  E-value=6.9e-27  Score=212.10  Aligned_cols=167  Identities=34%  Similarity=0.463  Sum_probs=141.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      .+.|+..+.||+|+||.||+|... +++.||+|.+....   ....+++.+|+++++.++|||++++.+++.+++..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            345778899999999999999875 68899999885432   23446788999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +||++ |++.+.+..  ....+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++.....
T Consensus        94 ~e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~  167 (307)
T cd06607          94 MEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP  167 (307)
T ss_pred             HHhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence            99997 566666542  234689999999999999999999998   999999999999999999999999999865433


Q ss_pred             CCccccccccccCcccccccc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLL  326 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~  326 (335)
                      ..    ...++..|+|||++.
T Consensus       168 ~~----~~~~~~~y~aPE~~~  184 (307)
T cd06607         168 AN----SFVGTPYWMAPEVIL  184 (307)
T ss_pred             CC----CccCCccccCceeee
Confidence            22    235788999999985


No 307
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.95  E-value=3e-27  Score=214.86  Aligned_cols=173  Identities=28%  Similarity=0.401  Sum_probs=141.1

Q ss_pred             CCcccceeeecccEEEEEEEeC---CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD---DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRF  223 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  223 (335)
                      .|+..+.||+|++|.||+|...   ++..||+|.+....   ......+.+|++++++++||||+++++++.+.  +..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3677889999999999999875   47899999987532   33346678999999999999999999999988  7899


Q ss_pred             EEEEecCCCCHhHHhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC----CCcEEEEcc
Q 019842          224 IVYELMENRSLDIQLHGP--SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS----KFNAKLSDF  297 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~----~~~~kl~Df  297 (335)
                      +||||+++ +|.+.+...  .....+++..++.++.|++.||+|||+.   +++||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 565555321  1223689999999999999999999999   9999999999999999    999999999


Q ss_pred             cCceeCCCCCc---cccccccccCccccccccCC
Q 019842          298 GLAITDGSQNK---NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       298 gla~~~~~~~~---~~~~~~gt~~y~aPE~l~~~  328 (335)
                      |++........   ......++..|+|||++.++
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  190 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGA  190 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCC
Confidence            99865433221   12234578899999988664


No 308
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95  E-value=1.7e-27  Score=238.38  Aligned_cols=181  Identities=24%  Similarity=0.359  Sum_probs=145.7

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--Ce
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DT  221 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~  221 (335)
                      +...++|.+.+.||+|+||+||+|+.. ++..||+|.+...  .......+..|+.++++++||||+++++++.+.  +.
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            445678999999999999999999875 4678899988543  334456789999999999999999999988543  57


Q ss_pred             EEEEEEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCC----CCeEecCCCCCCEEEcCC-------
Q 019842          222 RFIVYELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCN----PAVIHRDLKSSNILLDSK-------  289 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~----~~ivHrdlk~~Nill~~~-------  289 (335)
                      .|+||||+++|+|.+++... .....+++..++.|+.||+.||+|||+...    .+|+||||||+||||+.+       
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            89999999999999988642 223569999999999999999999998521    259999999999999642       


Q ss_pred             ----------CcEEEEcccCceeCCCCCccccccccccCccccccccCC
Q 019842          290 ----------FNAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       290 ----------~~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                                ..+||+|||++........ .....||+.|+|||++.+.
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-~~s~vGTp~YmAPEvL~ge  216 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESM-AHSCVGTPYYWSPELLLHE  216 (1021)
T ss_pred             cccccccCCCCceEEccCCcccccccccc-ccccCCCccccCHHHHhcc
Confidence                      3489999999976543222 2234689999999998643


No 309
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95  E-value=4e-27  Score=211.77  Aligned_cols=171  Identities=27%  Similarity=0.366  Sum_probs=143.9

Q ss_pred             CCcccceeeecccEEEEEEEe----CCCceEEEEEecccC----chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeE
Q 019842          152 SFHESNILGEGGFGCVYKAKL----DDNLHVAVKKLDCAT----QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  222 (335)
                      +|+..+.||+|+||.||+++.    .+|..||+|.+....    ....+.+.+|+.++.++ +|+||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999976    368899999986432    22346688999999999 599999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++|+||+++++|.+++..   ...+++..+..++.|+++||.|||+.   +++||||+|+|||+++++.+||+|||++..
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            999999999999999853   34688999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCCCc-cccccccccCccccccccCC
Q 019842          303 DGSQNK-NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       303 ~~~~~~-~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ...... ......|+..|+|||.+.++
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (290)
T cd05613         155 FHEDEVERAYSFCGTIEYMAPDIVRGG  181 (290)
T ss_pred             cccccccccccccCCcccCChhhccCC
Confidence            433221 12234588999999998753


No 310
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95  E-value=3.9e-27  Score=210.87  Aligned_cols=180  Identities=29%  Similarity=0.444  Sum_probs=148.2

Q ss_pred             HHHHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEe--
Q 019842          143 YKLLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAH--  218 (335)
Q Consensus       143 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~--  218 (335)
                      ...+..+...|+..+.||+|+||.||+|... +++.+|+|.+.... ....++..|+.+++++ +|+||+++++++..  
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            3444556678888999999999999999874 57889999886433 3445688999999998 79999999999853  


Q ss_pred             ----CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          219 ----DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       219 ----~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                          .+..+++|||+++|+|.+++... ....+++..++.++.|++.||+|||+.   +++||||+|+||++++++.++|
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEE
Confidence                45789999999999999888642 234588999999999999999999999   9999999999999999999999


Q ss_pred             EcccCceeCCCCCccccccccccCccccccccC
Q 019842          295 SDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       295 ~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      +|||++..............|+..|+|||.+..
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~  195 (282)
T cd06636         163 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC  195 (282)
T ss_pred             eeCcchhhhhccccCCCcccccccccCHhhcCc
Confidence            999998654332222234568999999999863


No 311
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.95  E-value=6.5e-27  Score=210.80  Aligned_cols=173  Identities=31%  Similarity=0.472  Sum_probs=141.8

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ++|+..+.||+|++|.||+|... +++.|++|.+.....  .....+.+|++++++++|+||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888899999999999999875 688999998864332  234568899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEcccCceeCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~~~~~  306 (335)
                      |++ ++|.+++... ....+++..+..++.|++.||+|||++   +++||||+|+||++++ ++.+||+|||++......
T Consensus        82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            996 5777776432 233468888999999999999999999   9999999999999985 567999999999654433


Q ss_pred             CccccccccccCccccccccCC
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ........++..|+|||++.++
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~  178 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLGS  178 (294)
T ss_pred             ccccccCceeecccCHHHHhCC
Confidence            2222233578899999998664


No 312
>PTZ00284 protein kinase; Provisional
Probab=99.95  E-value=2.4e-27  Score=227.33  Aligned_cols=177  Identities=21%  Similarity=0.280  Sum_probs=140.2

Q ss_pred             HHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCC------CceeEEeeEEE
Q 019842          145 LLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHH------PNVVCLLGYSA  217 (335)
Q Consensus       145 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~g~~~  217 (335)
                      .++...++|++.+.||+|+||+||+|... +++.||||+++... ...+++..|++++..++|      .+++++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            34455788999999999999999999864 57889999986432 233456667777777654      45899999887


Q ss_pred             eC-CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEcCCC-----
Q 019842          218 HD-DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLDSKF-----  290 (335)
Q Consensus       218 ~~-~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~~~~-----  290 (335)
                      .. +..++|||++ +++|.+++..   ...+++..+..++.||+.||+|||+ .   +|+||||||+|||++.++     
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~  274 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDP  274 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccc
Confidence            65 4789999988 6778877743   3569999999999999999999997 5   899999999999998765     


Q ss_pred             -----------cEEEEcccCceeCCCCCccccccccccCccccccccCCcCcc
Q 019842          291 -----------NAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       291 -----------~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                                 .+||+|||++.....   ......||+.|+|||++.+..++.
T Consensus       275 ~~~~~~~~~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~~~~~  324 (467)
T PTZ00284        275 VTNRALPPDPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGLGWMY  324 (467)
T ss_pred             ccccccCCCCceEEECCCCccccCcc---ccccccCCccccCcHHhhcCCCCc
Confidence                       499999998754322   223457999999999998887653


No 313
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.95  E-value=3.4e-27  Score=212.77  Aligned_cols=169  Identities=31%  Similarity=0.384  Sum_probs=145.2

Q ss_pred             cceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          156 SNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ...||+|+||.||++... ++..||+|++..........+.+|+.++++++|+|++++++++...+..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            356999999999999874 6889999998655555567799999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .+++..    ..+++.....++.|++.||+|||+.   +++||||+|+||++++++.++|+|||++..............
T Consensus       105 ~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~  177 (292)
T cd06657         105 TDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV  177 (292)
T ss_pred             HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccc
Confidence            988742    3589999999999999999999999   999999999999999999999999999865433322223346


Q ss_pred             cccCccccccccCCcCc
Q 019842          315 GTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~~  331 (335)
                      ++..|+|||++.++.++
T Consensus       178 ~~~~y~~pE~~~~~~~~  194 (292)
T cd06657         178 GTPYWMAPELISRLPYG  194 (292)
T ss_pred             cCccccCHHHhcCCCCC
Confidence            88999999998776654


No 314
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95  E-value=2.4e-28  Score=228.93  Aligned_cols=172  Identities=27%  Similarity=0.416  Sum_probs=148.8

Q ss_pred             ccceeeecccEEEEEEEeCC--C--ceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          155 ESNILGEGGFGCVYKAKLDD--N--LHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      ..++||+|.||.|++|.|+.  |  ..||||.++..... ...+|.+|+.+|.+|+|+|+++|||+..+ ...+||+|++
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence            35689999999999998752  3  46899999766554 56889999999999999999999999998 7889999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      +.|+|.+.|+. .....+.......++.|||.||.||.++   ++|||||.++|+||...-.+||+||||.+.++.....
T Consensus       193 plGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  193 PLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             ccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence            99999999987 4567788999999999999999999999   9999999999999999999999999999887655443


Q ss_pred             cc---ccccccCccccccccCCcCc
Q 019842          310 NL---KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       310 ~~---~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..   ...-...|+|||.+..+.|+
T Consensus       269 Yvm~p~rkvPfAWCaPEsLrh~kFS  293 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLRHRKFS  293 (1039)
T ss_pred             eEecCCCcCcccccCHhHhcccccc
Confidence            21   12345689999999999886


No 315
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.95  E-value=6.7e-27  Score=210.13  Aligned_cols=176  Identities=30%  Similarity=0.382  Sum_probs=146.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~  226 (335)
                      ++|...+.||.|++|.||++... +++.+|+|.+.... .....++.+|++++++++||||+++++++.+.  +..++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36778899999999999999875 57889999886432 34457799999999999999999999998654  4789999


Q ss_pred             EecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          227 ELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       227 E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||+++++|.+++... .....+++.....++.|+++||.|||+.   +++|+||+|+||++++++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            999999998876531 2345689999999999999999999999   999999999999999999999999999865432


Q ss_pred             CCccccccccccCccccccccCCcCc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ...  ....++..|+|||.+.++.++
T Consensus       158 ~~~--~~~~~~~~y~~pE~~~~~~~~  181 (287)
T cd06621         158 SLA--GTFTGTSFYMAPERIQGKPYS  181 (287)
T ss_pred             ccc--ccccCCccccCHHHhcCCCCC
Confidence            221  133578899999999877654


No 316
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95  E-value=3e-27  Score=208.34  Aligned_cols=176  Identities=28%  Similarity=0.432  Sum_probs=147.3

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|+||.||+|... ++..+|+|.+....  ....+.+.+|++++++++|+|++++++.+.+++..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4677889999999999999875 57889999986432  23446788999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-cEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-NAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfgla~~~~~~~  307 (335)
                      +++++|.+++.. .....+++..+..++.|+++||+|||+.   +++|+||+|+||++++++ .+||+|||.+.......
T Consensus        81 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          81 CDGGDLMKRINR-QRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             CCCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence            999999998864 2334689999999999999999999999   999999999999999885 47999999986654333


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......|+..|+|||++.++.++
T Consensus       157 ~~~~~~~~~~~~~ape~~~~~~~~  180 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQNRPYN  180 (257)
T ss_pred             ccccccCCCccccCHHHHcCCCCC
Confidence            222234588999999998776553


No 317
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.95  E-value=1.3e-26  Score=202.96  Aligned_cols=173  Identities=33%  Similarity=0.491  Sum_probs=150.8

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      +|...+.||+|++|.||++... ++..+++|++..........+.+|++.+++++|+|++++++++..++..++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4667889999999999999876 688999999976655566789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +++|.+++...  ...+++..+..++.|+++||+|||+.   +++||||+|+||++++++.++|+|||.+........ .
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~  154 (253)
T cd05122          81 GGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-R  154 (253)
T ss_pred             CCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-c
Confidence            99999988642  25789999999999999999999998   999999999999999999999999999866544332 2


Q ss_pred             cccccccCccccccccCCcC
Q 019842          311 LKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ....++..|+|||.+.++.+
T Consensus       155 ~~~~~~~~~~~PE~~~~~~~  174 (253)
T cd05122         155 NTMVGTPYWMAPEVINGKPY  174 (253)
T ss_pred             cceecCCcccCHHHHcCCCC
Confidence            34468899999999877654


No 318
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.95  E-value=5.2e-27  Score=209.71  Aligned_cols=168  Identities=30%  Similarity=0.390  Sum_probs=140.9

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||+||++... +++.+|+|.+....   ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999754 68899999885432   22345577899999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .+++.... ...+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++....... ......
T Consensus        81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~  155 (277)
T cd05577          81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-KIKGRA  155 (277)
T ss_pred             HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-cccccc
Confidence            99886432 24689999999999999999999999   99999999999999999999999999986543221 112335


Q ss_pred             cccCccccccccCCcCc
Q 019842          315 GTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~~  331 (335)
                      ++..|+|||++.++.++
T Consensus       156 ~~~~y~~PE~~~~~~~~  172 (277)
T cd05577         156 GTPGYMAPEVLQGEVYD  172 (277)
T ss_pred             CCCCcCCHHHhcCCCCC
Confidence            78899999999877653


No 319
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95  E-value=7.6e-28  Score=207.55  Aligned_cols=173  Identities=25%  Similarity=0.379  Sum_probs=143.6

Q ss_pred             cceeeecccEEEEEEE-eCCCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          156 SNILGEGGFGCVYKAK-LDDNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      .++||+|+|+.|--+. +.+|.++|||+++........++.+|++++.+. .|+||+.|+.++++++..|||||-|.+|+
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp  162 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP  162 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence            4679999999998874 678999999999877666778899999999999 59999999999999999999999999999


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc---EEEEcccCceeCC---C--
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN---AKLSDFGLAITDG---S--  305 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~---~kl~Dfgla~~~~---~--  305 (335)
                      |..+++.   ...+++.++.++..+|+.||.|||.+   +|.|||+||+|||-.+-..   +||+||.++....   +  
T Consensus       163 lLshI~~---~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s  236 (463)
T KOG0607|consen  163 LLSHIQK---RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS  236 (463)
T ss_pred             HHHHHHH---hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence            9999864   45699999999999999999999999   9999999999999866443   8999999873221   1  


Q ss_pred             --CCccccccccccCccccccc--cCCcCcccc
Q 019842          306 --QNKNNLKLSGTLGYVAPEYL--LDGMVGKFL  334 (335)
Q Consensus       306 --~~~~~~~~~gt~~y~aPE~l--~~~~~~~~~  334 (335)
                        ....-.+.+|+..|||||+.  .-++.+-||
T Consensus       237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YD  269 (463)
T KOG0607|consen  237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYD  269 (463)
T ss_pred             CCCCccccCcccchhhcchhHHhhhcccccccc
Confidence              11122345789999999987  334444443


No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.95  E-value=8.6e-27  Score=205.03  Aligned_cols=177  Identities=25%  Similarity=0.389  Sum_probs=151.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|++|.||++... ++..+++|++.....  ....++.+|++++++++|+|++++.+.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4677889999999999999875 588999999875433  5567789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPS-HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      +++++|.+++.... ....+++..+..++.++++||.|||+.   +++|+||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999886522 246799999999999999999999999   99999999999999999999999999986654443


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .......|++.|+|||.+.+..++
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~  181 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPYN  181 (258)
T ss_pred             ceecceeeeecccChhHhccCCCC
Confidence            222334688899999998777654


No 321
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.95  E-value=7e-27  Score=206.94  Aligned_cols=166  Identities=30%  Similarity=0.353  Sum_probs=142.5

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||.|++|.||+++.. +++.+++|.+....   ....+.+.+|+.++++++||||+++++++.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999876 47899999986432   23456799999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .+++..   ...+++..+..++.|+++||+|||+.   +++|+||+|+||++++++.+||+|||++....... ......
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~  153 (262)
T cd05572          81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC  153 (262)
T ss_pred             HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence            999854   34589999999999999999999998   99999999999999999999999999987654332 222346


Q ss_pred             cccCccccccccCCcCc
Q 019842          315 GTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~~  331 (335)
                      ++..|+|||.+.+..++
T Consensus       154 ~~~~~~~PE~~~~~~~~  170 (262)
T cd05572         154 GTPEYVAPEIILNKGYD  170 (262)
T ss_pred             CCcCccChhHhcCCCCC
Confidence            78899999998776654


No 322
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95  E-value=6e-27  Score=209.72  Aligned_cols=171  Identities=32%  Similarity=0.499  Sum_probs=143.3

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      |+..+.||+|++|.||+|... +|..|++|++....  ......+.+|++.+++++|+|++++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            456788999999999999864 68999999986443  223456889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      + ++|.+++.... ...+++..++.++.|+++||+|||++   +++||||+|+||++++++.++|+|||++.........
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~  155 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT  155 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence            5 68988886422 24689999999999999999999998   9999999999999999999999999998654433222


Q ss_pred             ccccccccCccccccccCC
Q 019842          310 NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....++..|+|||++.++
T Consensus       156 ~~~~~~~~~~~aPE~~~~~  174 (283)
T cd07835         156 YTHEVVTLWYRAPEILLGS  174 (283)
T ss_pred             cCccccccCCCCCceeecC
Confidence            2233568899999988764


No 323
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=1.8e-27  Score=229.56  Aligned_cols=179  Identities=21%  Similarity=0.293  Sum_probs=138.2

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeCC--CceEEEE------------------EecccCchhHHHHHHHHHHHhcCCCC
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLDD--NLHVAVK------------------KLDCATQDAGREFENEVDLLSNIHHP  207 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~  207 (335)
                      ...++|+..+.||+|+||+||++....  +...+.|                  ++. ........+.+|++++++++|+
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCC
Confidence            345789999999999999999986532  2222222                  111 1222345688999999999999


Q ss_pred             ceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEE
Q 019842          208 NVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPS--HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNIL  285 (335)
Q Consensus       208 niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nil  285 (335)
                      ||+++++++.+.+..|+|+|++. ++|.+++....  ............++.|++.||+|||++   +|+||||||+|||
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL  299 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF  299 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            99999999999999999999985 56766664321  112234566788999999999999999   9999999999999


Q ss_pred             EcCCCcEEEEcccCceeCCCCCc-cccccccccCccccccccCCcCc
Q 019842          286 LDSKFNAKLSDFGLAITDGSQNK-NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       286 l~~~~~~kl~Dfgla~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +++++.+||+|||+++....... ......||..|+|||++.++.++
T Consensus       300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  346 (501)
T PHA03210        300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYC  346 (501)
T ss_pred             ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCC
Confidence            99999999999999976543322 22235799999999999887764


No 324
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95  E-value=7.7e-27  Score=211.93  Aligned_cols=173  Identities=38%  Similarity=0.481  Sum_probs=142.7

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  224 (335)
                      .++|+..+.||+|+||.||+|... +++.||+|.++....  .....+.+|++++++++|+|++++++++.+.  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            467888999999999999999875 588999999864322  2234567899999999999999999998765  56899


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||++ ++|.+++...  ...+++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+|||++....
T Consensus        86 v~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCE-QDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            999997 5787777532  35689999999999999999999999   99999999999999999999999999997654


Q ss_pred             CCCccccccccccCccccccccCC
Q 019842          305 SQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       305 ~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ..........++..|+|||.+.+.
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~  183 (309)
T cd07845         160 LPAKPMTPKVVTLWYRAPELLLGC  183 (309)
T ss_pred             CccCCCCcccccccccChhhhcCC
Confidence            432222233457889999998754


No 325
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95  E-value=1.1e-26  Score=208.00  Aligned_cols=163  Identities=32%  Similarity=0.417  Sum_probs=132.6

Q ss_pred             eeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHH---HhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          158 ILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDL---LSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~---l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      +||+|+||.||++... +++.+|+|.+....   ......+.+|..+   +...+|+|++.+++++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999874 58899999885432   1222334445433   334479999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +|+|.+++..   ...+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++........  
T Consensus        81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~--  152 (279)
T cd05633          81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--  152 (279)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc--
Confidence            9999988853   34699999999999999999999999   999999999999999999999999999865433222  


Q ss_pred             cccccccCccccccccCC
Q 019842          311 LKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~  328 (335)
                      ....|+..|+|||.+.++
T Consensus       153 ~~~~~~~~y~aPE~~~~~  170 (279)
T cd05633         153 HASVGTHGYMAPEVLQKG  170 (279)
T ss_pred             cCcCCCcCccCHHHhcCC
Confidence            233689999999998653


No 326
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.95  E-value=9.5e-27  Score=213.00  Aligned_cols=165  Identities=22%  Similarity=0.195  Sum_probs=128.5

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC--CCceEEEEEeccc-----CchhHHHHHHHHHHHhcCCCCceeE-EeeEEEeC
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD--DNLHVAVKKLDCA-----TQDAGREFENEVDLLSNIHHPNVVC-LLGYSAHD  219 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~-l~g~~~~~  219 (335)
                      ...++|...+.||+|+||+||+|...  +++.||||++...     .......+.+|+++|++++|+|++. ++++    
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----   90 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----   90 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence            34568999999999999999999764  5777899987532     1223556999999999999999985 4432    


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC-CCCCEEEcCCCcEEEEccc
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDL-KSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdl-k~~Nill~~~~~~kl~Dfg  298 (335)
                      +..++||||+++++|... .  .. .      ...++.++++||+|||+.   +|+|||| ||+|||++.++.+||+|||
T Consensus        91 ~~~~LVmE~~~G~~L~~~-~--~~-~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG  157 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLA-R--PH-G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ  157 (365)
T ss_pred             CCcEEEEEccCCCCHHHh-C--cc-c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence            457999999999999632 1  11 1      146788999999999999   9999999 9999999999999999999


Q ss_pred             CceeCCCCCcc--------ccccccccCccccccccCCc
Q 019842          299 LAITDGSQNKN--------NLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       299 la~~~~~~~~~--------~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +|+........        -....++..|+|||++...+
T Consensus       158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~  196 (365)
T PRK09188        158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE  196 (365)
T ss_pred             cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence            99765433211        12345788899999986543


No 327
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95  E-value=4.4e-27  Score=207.85  Aligned_cols=167  Identities=30%  Similarity=0.416  Sum_probs=142.0

Q ss_pred             eeecccEEEEEEEeCC-CceEEEEEecccCc---hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLDD-NLHVAVKKLDCATQ---DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||.||+++..+ ++.+++|.+.....   .....+.+|++++++++|+||+++++.+..++..++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            5899999999998864 88999999864433   4556789999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc------
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK------  308 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~------  308 (335)
                      .+++...   ..+++..++.++.|+++||+|||+.   +++||||+|+||++++++.++|+|||++........      
T Consensus        81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  154 (265)
T cd05579          81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD  154 (265)
T ss_pred             HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence            9998642   3689999999999999999999999   999999999999999999999999999854332211      


Q ss_pred             --cccccccccCccccccccCCcCc
Q 019842          309 --NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       309 --~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ......++..|+|||...++.++
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~~~~~  179 (265)
T cd05579         155 EKEDKRIVGTPDYIAPEVILGQGHS  179 (265)
T ss_pred             cccccCcccCccccCHHHhcCCCCC
Confidence              22234578899999998776643


No 328
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95  E-value=2.7e-27  Score=232.29  Aligned_cols=185  Identities=30%  Similarity=0.437  Sum_probs=153.6

Q ss_pred             HHHHHhcCCcccceeeecccEEEEEEEeC--------CCceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEee
Q 019842          145 LLEKATDSFHESNILGEGGFGCVYKAKLD--------DNLHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLG  214 (335)
Q Consensus       145 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g  214 (335)
                      .+|...++....+.+|+|.||.|++|...        ....||||.++.. ...+.+.+..|+++|+.+ +|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            45555666667779999999999999743        1467999999654 445678899999999999 6999999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHhHHhcCCC-------C----C--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCC
Q 019842          215 YSAHDDTRFIVYELMENRSLDIQLHGPS-------H----G--SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKS  281 (335)
Q Consensus       215 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~-------~----~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~  281 (335)
                      +|.+++..++|.||+..|+|.++|+..+       .    .  ..++..+.+.++.|||.||+||++.   +++||||.+
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa  446 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA  446 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence            9999999999999999999999997543       0    0  2489999999999999999999999   999999999


Q ss_pred             CCEEEcCCCcEEEEcccCceeCCCCCcccc-ccc--cccCccccccccCCcCcc
Q 019842          282 SNILLDSKFNAKLSDFGLAITDGSQNKNNL-KLS--GTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       282 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-~~~--gt~~y~aPE~l~~~~~~~  332 (335)
                      +|||++++..+||+|||+|+.......... ...  -...|||||.+.+..|+.
T Consensus       447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~  500 (609)
T KOG0200|consen  447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTS  500 (609)
T ss_pred             hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccc
Confidence            999999999999999999987554443321 112  245799999999987764


No 329
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95  E-value=3.2e-28  Score=209.21  Aligned_cols=177  Identities=29%  Similarity=0.398  Sum_probs=143.6

Q ss_pred             hcCCcccceeeecccEEEEEEEeC---C--CceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEe-CCe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD---D--NLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAH-DDT  221 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~  221 (335)
                      ...|+....||+|.||.||+|.-.   +  ...+|+|+++....  .......+|+.+++.++|||++.|..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            456888899999999999999543   2  23789999975422  234567899999999999999999999887 778


Q ss_pred             EEEEEEecCCCCHhHHhc--CCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC----CcEEEE
Q 019842          222 RFIVYELMENRSLDIQLH--GPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK----FNAKLS  295 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~--~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~----~~~kl~  295 (335)
                      .+|++||.+. +|...++  +......++...+.+|+.||+.|+.|||++   =|+||||||.|||+..+    |.+||+
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence            9999999985 5655553  334446799999999999999999999999   79999999999999877    899999


Q ss_pred             cccCceeCCCCCc---cccccccccCccccccccCCcC
Q 019842          296 DFGLAITDGSQNK---NNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       296 Dfgla~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      |||+++.....-.   .......|.+|.|||.+.+.+.
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h  216 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH  216 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhccccc
Confidence            9999987654332   2223467999999999998754


No 330
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95  E-value=1.1e-27  Score=236.19  Aligned_cols=182  Identities=33%  Similarity=0.481  Sum_probs=142.8

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC-----
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD-----  219 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----  219 (335)
                      ....++|++.++||+||||.||+++.+ ||+.+|||++... +......+.+|+..+++|+|||||+++..+.+.     
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            455678889999999999999999876 8999999999654 344557789999999999999999987643100     


Q ss_pred             --------------------------------------------------------------------------------
Q 019842          220 --------------------------------------------------------------------------------  219 (335)
Q Consensus       220 --------------------------------------------------------------------------------  219 (335)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 019842          220 ----------------------------------DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEY  265 (335)
Q Consensus       220 ----------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~y  265 (335)
                                                        -.+|+=||||+..+++++++......  .....++++.+|++||.|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence                                              11467788888877777775422111  466789999999999999


Q ss_pred             HhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC------------------CCCccccccccccCccccccccC
Q 019842          266 LHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG------------------SQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       266 LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~------------------~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      +|++   ++|||||||.||+|+++..+||+|||+|....                  ......+...||.-|+|||++.+
T Consensus       713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            9999   99999999999999999999999999995510                  11112334579999999999987


Q ss_pred             CcCccc
Q 019842          328 GMVGKF  333 (335)
Q Consensus       328 ~~~~~~  333 (335)
                      ..-..|
T Consensus       790 ~~~~~Y  795 (1351)
T KOG1035|consen  790 TSSNKY  795 (1351)
T ss_pred             cccccc
Confidence            663344


No 331
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.95  E-value=1e-27  Score=200.09  Aligned_cols=181  Identities=29%  Similarity=0.371  Sum_probs=151.8

Q ss_pred             HhcCCcccceeeecccEEEEEEE-eCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TR  222 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~  222 (335)
                      ..++|.+.+.+|+|||+.||.++ ..++..+|+|++.+.+.++.+..++|++.-++++|||++++++++..+.     +.
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            35689999999999999999997 5678899999998888888899999999999999999999999875443     58


Q ss_pred             EEEEEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          223 FIVYELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      |++++|...|+|.+.+... .++..+++.+.+.|+.++++||++||+. .++++||||||.|||+.+.+.++|.|||.+.
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            9999999999999888753 3456899999999999999999999997 4469999999999999999999999999874


Q ss_pred             eCCCC---C------ccccccccccCccccccccCCcC
Q 019842          302 TDGSQ---N------KNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       302 ~~~~~---~------~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ...-.   .      ..+..-..|.-|.|||.+.-.-.
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~  215 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSH  215 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccC
Confidence            43211   0      11122346889999999865443


No 332
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.95  E-value=3.3e-26  Score=208.66  Aligned_cols=165  Identities=34%  Similarity=0.475  Sum_probs=139.9

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      .|...+.||+|+||.||+|+.. ++..||+|.+...   ......++.+|++++++++|+|++++++++.+++..++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            4667889999999999999864 6889999998643   22334578899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++ |+|.+.+..  ....+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++...... 
T Consensus       106 ~~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (317)
T cd06635         106 YCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-  178 (317)
T ss_pred             CCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence            997 577766642  245689999999999999999999999   9999999999999999999999999998654322 


Q ss_pred             ccccccccccCcccccccc
Q 019842          308 KNNLKLSGTLGYVAPEYLL  326 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~  326 (335)
                         ....++..|+|||++.
T Consensus       179 ---~~~~~~~~y~aPE~~~  194 (317)
T cd06635         179 ---NSFVGTPYWMAPEVIL  194 (317)
T ss_pred             ---ccccCCccccChhhhh
Confidence               1235788999999985


No 333
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95  E-value=6e-27  Score=208.05  Aligned_cols=173  Identities=37%  Similarity=0.527  Sum_probs=141.0

Q ss_pred             ceeeecccEEEEEEEeCC-------CceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKLDD-------NLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +.||+|+||.||+|+..+       +..+++|.+.... .....++.+|++++++++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998643       2578999875432 24456789999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-----cEEEEcccC
Q 019842          229 MENRSLDIQLHGPS----HGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-----NAKLSDFGL  299 (335)
Q Consensus       229 ~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-----~~kl~Dfgl  299 (335)
                      +++++|.+++....    ....+++..++.++.|++.||+|||+.   +++|+||+|+||++++++     .+|++|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            99999999986421    224588999999999999999999998   999999999999999887     899999999


Q ss_pred             ceeCCCCCc--cccccccccCccccccccCCcCcc
Q 019842          300 AITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       300 a~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      +........  ......++..|+|||++.++.++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  192 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTT  192 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCccc
Confidence            865432211  111223567899999998877653


No 334
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.94  E-value=3.1e-26  Score=201.39  Aligned_cols=173  Identities=31%  Similarity=0.451  Sum_probs=149.3

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFIVY  226 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~  226 (335)
                      +|...+.||+|++|.||+|... ++..|++|.+....  ....+.+.+|++.+++++|+||+++++.+.+.  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4667889999999999999876 68899999986543  24567899999999999999999999999998  8999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++++|.+++..   ...+++..++.++.|+++||+|||+.   +++|+||+|+||++++++.++|+|||.+......
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            99999999999864   23799999999999999999999998   9999999999999999999999999998765544


Q ss_pred             Cc--cccccccccCccccccccCCcC
Q 019842          307 NK--NNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       307 ~~--~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ..  ......++..|+|||.+.++.+
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~~~~~  180 (260)
T cd06606         155 ETGEGTGSVRGTPYWMAPEVIRGEEY  180 (260)
T ss_pred             cccccccCCCCCccccCHhhhcCCCC
Confidence            32  1223468889999999877643


No 335
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94  E-value=6.9e-27  Score=208.57  Aligned_cols=175  Identities=31%  Similarity=0.444  Sum_probs=148.7

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv  225 (335)
                      ++|...+.||+|++|.||+|... +++.|++|.+...   .......+.+|++++++++ |+||+++++++.+++..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46888899999999999999875 6889999998642   2334567889999999998 99999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |||+++++|.+++..   ...+++..++.++.|++.||.|||+.   +++|+||+|+||++++++.++++|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999999853   34799999999999999999999999   999999999999999999999999999865433


Q ss_pred             CC--------------------ccccccccccCccccccccCCcCc
Q 019842          306 QN--------------------KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       306 ~~--------------------~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..                    .......++..|+|||.+.++.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~  200 (280)
T cd05581         155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAG  200 (280)
T ss_pred             ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCC
Confidence            22                    112234578899999998776544


No 336
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.94  E-value=1.7e-26  Score=208.69  Aligned_cols=176  Identities=31%  Similarity=0.410  Sum_probs=143.6

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC---
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD---  220 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---  220 (335)
                      +...++|+..+.||+|+||.||+|... +++.||+|.++...  ......+.+|++++++++|||++++++++.+.+   
T Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence            345678999999999999999999875 57899999986432  223456788999999999999999999987655   


Q ss_pred             -------eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEE
Q 019842          221 -------TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAK  293 (335)
Q Consensus       221 -------~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~k  293 (335)
                             ..++|+||+++ ++...+..  ....+++..+..++.|++.||+|||+.   +++||||+|+||++++++.+|
T Consensus        83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k  156 (302)
T cd07864          83 DFKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK  156 (302)
T ss_pred             hccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence                   78999999986 66666643  234689999999999999999999999   999999999999999999999


Q ss_pred             EEcccCceeCCCCCc-cccccccccCccccccccCC
Q 019842          294 LSDFGLAITDGSQNK-NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       294 l~Dfgla~~~~~~~~-~~~~~~gt~~y~aPE~l~~~  328 (335)
                      |+|||++........ ......++..|+|||.+.+.
T Consensus       157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  192 (302)
T cd07864         157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE  192 (302)
T ss_pred             eCcccccccccCCcccccccceeccCccChHHhcCC
Confidence            999999865433221 11122457789999988654


No 337
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94  E-value=2.8e-26  Score=205.23  Aligned_cols=163  Identities=33%  Similarity=0.413  Sum_probs=133.0

Q ss_pred             eeeecccEEEEEEEeC-CCceEEEEEecccCc---hhHHHHHHHH---HHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          158 ILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ---DAGREFENEV---DLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      +||+|+||.||+|... +++.||+|.+.....   .....+..|.   ..++..+||||+++.+++.+.+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999764 588999998854321   1122233443   34455689999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +|+|..++..   ...+++..+..++.|+++||.|||+.   +++||||||+||++++++.+||+|||++........  
T Consensus        81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~--  152 (278)
T cd05606          81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP--  152 (278)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC--
Confidence            9999988853   35699999999999999999999998   999999999999999999999999999865433222  


Q ss_pred             cccccccCccccccccCC
Q 019842          311 LKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~~~  328 (335)
                      ....|+..|+|||++.++
T Consensus       153 ~~~~~~~~y~aPE~~~~~  170 (278)
T cd05606         153 HASVGTHGYMAPEVLQKG  170 (278)
T ss_pred             cCcCCCcCCcCcHHhcCC
Confidence            234689999999999765


No 338
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94  E-value=1.9e-26  Score=213.46  Aligned_cols=173  Identities=28%  Similarity=0.353  Sum_probs=144.0

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC------
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD------  219 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------  219 (335)
                      ..++|+..+.||+|+||.||+|... +++.||+|.+...  .......+.+|+.++++++|+||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            4578999999999999999999864 6889999998643  233446678899999999999999999988644      


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ...++||||++ ++|.+.+..     .+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||+
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCcc
Confidence            35799999996 578777642     288899999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCCcCc
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ++....... .....++..|+|||.+.+..++
T Consensus       165 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~  195 (353)
T cd07850         165 ARTAGTSFM-MTPYVVTRYYRAPEVILGMGYK  195 (353)
T ss_pred             ceeCCCCCC-CCCCcccccccCHHHHhCCCCC
Confidence            976544322 2234578899999999877664


No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.94  E-value=3.3e-26  Score=204.92  Aligned_cols=170  Identities=32%  Similarity=0.470  Sum_probs=142.2

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--CeEEEEEE
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--DTRFIVYE  227 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lv~E  227 (335)
                      |+..+.||+|++|.||+|... +++.+|+|++....  ......+.+|++++++++|+|++++++++.+.  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            456788999999999999876 47899999997553  33456788999999999999999999999988  89999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++ ++|.+++...  ...+++..++.++.|+++||+|||+.   +++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~-~~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          81 YMD-HDLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             ccc-ccHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            997 4888877532  25789999999999999999999999   99999999999999999999999999986654332


Q ss_pred             c-cccccccccCccccccccCC
Q 019842          308 K-NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~-~~~~~~gt~~y~aPE~l~~~  328 (335)
                      . ......++..|+|||.+.+.
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~~  176 (287)
T cd07840         155 SADYTNRVITLWYRPPELLLGA  176 (287)
T ss_pred             cccccccccccccCCceeeEcc
Confidence            1 11223467889999987653


No 340
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.94  E-value=3.4e-26  Score=203.67  Aligned_cols=176  Identities=28%  Similarity=0.425  Sum_probs=140.5

Q ss_pred             CcccceeeecccEEEEEEEeC----CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC------
Q 019842          153 FHESNILGEGGFGCVYKAKLD----DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD------  220 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  220 (335)
                      |...+.||+|+||.||+|.+.    +++.||+|.+...  .....+++.+|++++++++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456788999999999999753    3678999988643  3344567899999999999999999999886543      


Q ss_pred             eEEEEEEecCCCCHhHHhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          221 TRFIVYELMENRSLDIQLHGP---SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                      ..++++||+.+|+|..++...   .....+++...+.++.|++.||+|||+.   +++||||||+||++++++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence            247899999999998876431   1223589999999999999999999998   9999999999999999999999999


Q ss_pred             cCceeCCCCCc--cccccccccCccccccccCCcCc
Q 019842          298 GLAITDGSQNK--NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       298 gla~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |+++.......  ......++..|++||.+.++.++
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  193 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYT  193 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccc
Confidence            99875432221  11122356789999998776654


No 341
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94  E-value=3.1e-26  Score=207.59  Aligned_cols=174  Identities=29%  Similarity=0.395  Sum_probs=140.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC------
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD------  220 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  220 (335)
                      -++|+..+.||+|+||.||+|... +++.||+|.+....  ......+.+|++++++++||||+++++++...+      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            346888999999999999999875 68899999885432  222345678999999999999999999987654      


Q ss_pred             --eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          221 --TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       221 --~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                        ..++||||+. ++|...+..  ....+++..++.++.|++.||+|||++   +++||||||+||++++++.+||+|||
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg  164 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG  164 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence              4599999997 577777753  234689999999999999999999999   99999999999999999999999999


Q ss_pred             CceeCCCCCcc----ccccccccCccccccccCCc
Q 019842          299 LAITDGSQNKN----NLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       299 la~~~~~~~~~----~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ++.........    .....++..|+|||.+.+..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  199 (310)
T cd07865         165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGER  199 (310)
T ss_pred             CcccccCCcccCCCCccCcccCccccCcHHhcCCc
Confidence            98654322211    11234678899999886543


No 342
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94  E-value=2.3e-26  Score=219.05  Aligned_cols=177  Identities=23%  Similarity=0.346  Sum_probs=135.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEe-----------------CCCceEEEEEecccCchhHHH--------------HHHH
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKL-----------------DDNLHVAVKKLDCATQDAGRE--------------FENE  197 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E  197 (335)
                      ..++|++.++||+|+||.||+|..                 .+++.||||++........++              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            367899999999999999999964                 235679999986544333233              3447


Q ss_pred             HHHHhcCCCCce-----eEEeeEEEe--------CCeEEEEEEecCCCCHhHHhcCCCC---------------------
Q 019842          198 VDLLSNIHHPNV-----VCLLGYSAH--------DDTRFIVYELMENRSLDIQLHGPSH---------------------  243 (335)
Q Consensus       198 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lv~E~~~~g~L~~~l~~~~~---------------------  243 (335)
                      +.++.+++|.|+     ++++++|..        .+..++||||+++++|.++++....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777788876654     677887753        3568999999999999998864210                     


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc-cccccccccCcccc
Q 019842          244 GSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK-NNLKLSGTLGYVAP  322 (335)
Q Consensus       244 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~gt~~y~aP  322 (335)
                      ...+++..+..++.|+++||.|||+.   +++||||||+|||+++++.+||+|||+++....... ......+++.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            12356788899999999999999999   999999999999999999999999999965432221 11122347899999


Q ss_pred             ccccCC
Q 019842          323 EYLLDG  328 (335)
Q Consensus       323 E~l~~~  328 (335)
                      |.+...
T Consensus       380 E~l~~~  385 (507)
T PLN03224        380 EELVMP  385 (507)
T ss_pred             hhhcCC
Confidence            998654


No 343
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.94  E-value=2.4e-26  Score=211.30  Aligned_cols=171  Identities=30%  Similarity=0.453  Sum_probs=140.9

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~  222 (335)
                      .++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++|+||+++++++...+     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            468999999999999999999764 68899999986432 334566889999999999999999999876543     57


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++++||++ ++|...+..    ..+++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+|||++..
T Consensus        84 ~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence            99999997 577777642    4689999999999999999999999   999999999999999999999999999865


Q ss_pred             CCCCCc---cccccccccCccccccccCC
Q 019842          303 DGSQNK---NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       303 ~~~~~~---~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ......   ......|+..|+|||.+.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  184 (336)
T cd07849         156 ADPEHDHTGFLTEYVATRWYRAPEIMLNS  184 (336)
T ss_pred             ccccccccCCcCCcCcCCCccChHHhhCC
Confidence            433221   11234678999999987653


No 344
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.94  E-value=5e-26  Score=201.25  Aligned_cols=164  Identities=27%  Similarity=0.355  Sum_probs=135.7

Q ss_pred             ceeeecccEEEEEEEeC-CCceEEEEEecccCc---hhHHHHHHHHHHH-hcCCCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          157 NILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ---DAGREFENEVDLL-SNIHHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      +.||+|+||.||+|... +++.||+|.+.....   .....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999864 578999999864322   2223445555544 445899999999999999999999999999


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      ++|.+++..   ...+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++.....    ..
T Consensus        82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~  151 (260)
T cd05611          82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK  151 (260)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence            999999853   34689999999999999999999999   999999999999999999999999999865432    12


Q ss_pred             ccccccCccccccccCCcC
Q 019842          312 KLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~  330 (335)
                      ...++..|+|||.+.++.+
T Consensus       152 ~~~~~~~y~~pe~~~~~~~  170 (260)
T cd05611         152 KFVGTPDYLAPETILGVGD  170 (260)
T ss_pred             cCCCCcCccChhhhcCCCC
Confidence            3457889999999987764


No 345
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94  E-value=5.8e-27  Score=215.62  Aligned_cols=172  Identities=26%  Similarity=0.336  Sum_probs=144.2

Q ss_pred             cCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCch--------hHHHHHHHHHHHhcCC---CCceeEEeeEEEe
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQD--------AGREFENEVDLLSNIH---HPNVVCLLGYSAH  218 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---H~niv~l~g~~~~  218 (335)
                      .+|...+.+|+|+||.|+.|.++. ...|++|.+.....-        ..-.+-.||++|+.++   |+||+++++++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            457888999999999999998764 567888888543210        1112457999999997   9999999999999


Q ss_pred             CCeEEEEEEecCC-CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          219 DDTRFIVYELMEN-RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       219 ~~~~~lv~E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                      ++.+||+||-... -+|.+++.   ....+++.++..|+.||+-|+++||++   +|||||||-+||.++.+|-+||+||
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidf  714 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDF  714 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeec
Confidence            9999999997654 47888884   345699999999999999999999999   9999999999999999999999999


Q ss_pred             cCceeCCCCCccccccccccCccccccccCCcC
Q 019842          298 GLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       298 gla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      |.|........  ..+.||..|.|||++.+.+|
T Consensus       715 gsaa~~ksgpf--d~f~gtv~~aapevl~g~~y  745 (772)
T KOG1152|consen  715 GSAAYTKSGPF--DVFVGTVDYAAPEVLGGEKY  745 (772)
T ss_pred             cchhhhcCCCc--ceeeeeccccchhhhCCCcc
Confidence            99866543333  25689999999999998877


No 346
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.94  E-value=2.2e-26  Score=211.63  Aligned_cols=172  Identities=32%  Similarity=0.475  Sum_probs=142.7

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----e
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----T  221 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~  221 (335)
                      .++|...+.||+|+||.||+|+.. ++..||+|.+...  .......+.+|+.+++.++|+||+++++++....     .
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            457888999999999999999864 6889999998643  2333456788999999999999999999886543     4


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      .++|+||+. ++|.+++..   ...+++..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||++.
T Consensus        84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999996 688887743   35699999999999999999999999   99999999999999999999999999997


Q ss_pred             eCCCCCccccccccccCccccccccCC
Q 019842          302 TDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       302 ~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .............++..|+|||++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (337)
T cd07858         157 TTSEKGDFMTEYVVTRWYRAPELLLNC  183 (337)
T ss_pred             ccCCCcccccccccccCccChHHHhcC
Confidence            654332222234578899999998753


No 347
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.94  E-value=2.5e-26  Score=211.23  Aligned_cols=172  Identities=33%  Similarity=0.444  Sum_probs=141.6

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC--CeE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD--DTR  222 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~  222 (335)
                      ..++|+..+.||+|+||.||+|... ++..+|+|++...  .......+.+|+.+++++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3567888899999999999999875 5789999988532  233445678899999999 999999999998654  368


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++||||++ ++|..++..    ..+++..++.++.|++.||+|||+.   +++||||+|+||++++++.+||+|||++..
T Consensus        85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            99999997 589888753    2688999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCCC-----ccccccccccCccccccccCC
Q 019842          303 DGSQN-----KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       303 ~~~~~-----~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....     .......|+..|+|||.+.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (337)
T cd07852         157 LSELEENPENPVLTDYVATRWYRAPEILLGS  187 (337)
T ss_pred             cccccccccCcchhcccccccccCceeeecc
Confidence            43222     112234578899999988653


No 348
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.94  E-value=4.1e-26  Score=209.55  Aligned_cols=172  Identities=30%  Similarity=0.365  Sum_probs=139.8

Q ss_pred             cCCc-ccceeeecccEEEEEEEeC-CCceEEEEEecccCchh--------------HHHHHHHHHHHhcCCCCceeEEee
Q 019842          151 DSFH-ESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDA--------------GREFENEVDLLSNIHHPNVVCLLG  214 (335)
Q Consensus       151 ~~~~-~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~g  214 (335)
                      ++|. ..+.||+|+||.||+|... +++.||+|.+.......              ...+.+|++++++++|+||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            3444 3567999999999999865 68899999885432211              125789999999999999999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          215 YSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       215 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                      ++...+..++||||++ |+|.+++..   ...+++.....++.|+++||+|||+.   +++||||+|+||++++++.+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence            9999999999999997 688888853   34589999999999999999999998   9999999999999999999999


Q ss_pred             EcccCceeCCC--------------CCccccccccccCccccccccCCc
Q 019842          295 SDFGLAITDGS--------------QNKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       295 ~Dfgla~~~~~--------------~~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      +|||++.....              .........++..|+|||.+.+..
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  209 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAE  209 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCC
Confidence            99999865441              111111234678899999987643


No 349
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.94  E-value=2.5e-26  Score=202.28  Aligned_cols=175  Identities=29%  Similarity=0.402  Sum_probs=148.6

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|+..+.||+|++|.||+++.. +++.+++|.+...  ......++.+|++++++++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4677889999999999999764 6789999998643  233456788999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      +++++|.+++... .....+++..++.++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            9999999887542 2235689999999999999999999999   99999999999999999999999999986654432


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .  ....++..|+|||.+.+..++
T Consensus       158 ~--~~~~~~~~~~~Pe~~~~~~~~  179 (256)
T cd08530         158 A--KTQIGTPHYMAPEVWKGRPYS  179 (256)
T ss_pred             c--ccccCCccccCHHHHCCCCCC
Confidence            1  223578899999999887664


No 350
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.94  E-value=2.3e-26  Score=210.74  Aligned_cols=170  Identities=33%  Similarity=0.432  Sum_probs=144.4

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TRF  223 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  223 (335)
                      +|+..+.||+|++|.||+|+.. ++..|++|++....  ....+.+.+|+++++.++|+||+++++++...+     ..|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999875 48899999986543  345567999999999999999999999988875     789


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      ++|||++ ++|...+..   ...+++..++.++.|+++||+|||+.   +++||||||+||++++++.++|+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999998 578888753   33799999999999999999999999   9999999999999999999999999998665


Q ss_pred             CCCC---ccccccccccCccccccccCC
Q 019842          304 GSQN---KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       304 ~~~~---~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      ....   .......++..|+|||++.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELLLSS  181 (330)
T ss_pred             cccccccccccccccccCcCCceeeecc
Confidence            4332   112234578899999999876


No 351
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94  E-value=1.4e-25  Score=199.54  Aligned_cols=168  Identities=23%  Similarity=0.266  Sum_probs=135.9

Q ss_pred             HhcCCccccee--eecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEE
Q 019842          149 ATDSFHESNIL--GEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       149 ~~~~~~~~~~i--g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..++|...+.+  |+|+||.||++... ++..+|+|.+.......   .  |+.....+ +|+|++++++++...+..++
T Consensus        12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~i   86 (267)
T PHA03390         12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTLKGHVL   86 (267)
T ss_pred             HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence            34566666665  99999999999864 57888999875432111   1  22222222 79999999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-cEEEEcccCceeC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-NAKLSDFGLAITD  303 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfgla~~~  303 (335)
                      ||||+++++|.+++..   ...+++..+..++.|+++||.|||+.   +++||||+|+||++++++ .++|+|||++...
T Consensus        87 v~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~  160 (267)
T PHA03390         87 IMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKII  160 (267)
T ss_pred             EEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence            9999999999999853   23799999999999999999999999   999999999999999998 9999999998665


Q ss_pred             CCCCccccccccccCccccccccCCcCc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....    ...++..|+|||++.++.++
T Consensus       161 ~~~~----~~~~~~~y~aPE~~~~~~~~  184 (267)
T PHA03390        161 GTPS----CYDGTLDYFSPEKIKGHNYD  184 (267)
T ss_pred             CCCc----cCCCCCcccChhhhcCCCCC
Confidence            4322    23588999999999887664


No 352
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.94  E-value=1.6e-25  Score=203.82  Aligned_cols=165  Identities=35%  Similarity=0.480  Sum_probs=138.9

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      |...+.||+|+||+||+|+.. ++..|++|.+...   .......+.+|++++++++|||++++++++.+.+..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            555678999999999999864 6789999998643   223345788999999999999999999999999999999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK  308 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  308 (335)
                      +. |++.+.+..  ....+++..++.++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++......  
T Consensus       103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~--  174 (313)
T cd06633         103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA--  174 (313)
T ss_pred             CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC--
Confidence            96 577666643  235689999999999999999999999   9999999999999999999999999998543221  


Q ss_pred             cccccccccCccccccccC
Q 019842          309 NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       309 ~~~~~~gt~~y~aPE~l~~  327 (335)
                        ....|+..|+|||++.+
T Consensus       175 --~~~~~~~~y~aPE~~~~  191 (313)
T cd06633         175 --NSFVGTPYWMAPEVILA  191 (313)
T ss_pred             --CCccccccccChhhccc
Confidence              23468889999999853


No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94  E-value=6.5e-26  Score=209.04  Aligned_cols=171  Identities=28%  Similarity=0.387  Sum_probs=142.6

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC---
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD---  220 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---  220 (335)
                      ....++|+..+.||+|+||.||+|... ++..||+|++....  ......+.+|++++++++||||+++++++..++   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            445678999999999999999999754 68899999985432  223456889999999999999999999987654   


Q ss_pred             ---eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcc
Q 019842          221 ---TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDF  297 (335)
Q Consensus       221 ---~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Df  297 (335)
                         ..++||||+ +++|.+++..    ..+++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+||
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df  162 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF  162 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence               458999999 6788877742    4689999999999999999999999   9999999999999999999999999


Q ss_pred             cCceeCCCCCccccccccccCccccccccCC
Q 019842          298 GLAITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       298 gla~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      |++.......   ....++..|+|||++.+.
T Consensus       163 g~~~~~~~~~---~~~~~~~~y~aPE~~~~~  190 (343)
T cd07880         163 GLARQTDSEM---TGYVVTRWYRAPEVILNW  190 (343)
T ss_pred             ccccccccCc---cccccCCcccCHHHHhCC
Confidence            9986543322   233578899999998753


No 354
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.94  E-value=7.6e-26  Score=202.26  Aligned_cols=168  Identities=26%  Similarity=0.316  Sum_probs=137.4

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCC-CCceeEEeeEEEeC--CeEEEEEE
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIH-HPNVVCLLGYSAHD--DTRFIVYE  227 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lv~E  227 (335)
                      |+..+.||+|+||.||+|... ++..||+|+++... ........+|+..+.++. |+|++++++++.++  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            456788999999999999864 68899999986532 222334567899999985 99999999999988  88999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |++ |+|.+.+..  ....+++..++.++.|++.||+|||+.   +++||||+|+||++++ +.+||+|||++.......
T Consensus        81 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          81 LMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             cCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence            997 578777753  235689999999999999999999999   9999999999999999 999999999996654332


Q ss_pred             ccccccccccCccccccccCC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .. ....++..|+|||++..+
T Consensus       154 ~~-~~~~~~~~y~aPE~~~~~  173 (282)
T cd07831         154 PY-TEYISTRWYRAPECLLTD  173 (282)
T ss_pred             Cc-CCCCCCcccCChhHhhcC
Confidence            21 223578899999987554


No 355
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94  E-value=4.7e-26  Score=204.58  Aligned_cols=172  Identities=27%  Similarity=0.357  Sum_probs=143.6

Q ss_pred             CCcccceeeecccEEEEEEEe----CCCceEEEEEecccC----chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeE
Q 019842          152 SFHESNILGEGGFGCVYKAKL----DDNLHVAVKKLDCAT----QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  222 (335)
                      +|+..+.||+|++|.||+++.    .++..||+|.+....    ......+.+|++++.++ +|+||+++++.+..++..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            366788999999999999974    356889999986432    22345688999999999 599999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++||||+++|+|.+++..   ...+++..+..++.|+++||+|||+.   +++||||+|+||++++++.++|+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence            999999999999988853   34689999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCCCc-cccccccccCccccccccCCc
Q 019842          303 DGSQNK-NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       303 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ...... ......|+..|+|||.+.++.
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~  182 (288)
T cd05583         155 FLAEEEERAYSFCGTIEYMAPEVIRGGS  182 (288)
T ss_pred             cccccccccccccCCccccCHHHhcCCC
Confidence            433221 122345889999999987654


No 356
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.94  E-value=3.7e-26  Score=209.82  Aligned_cols=171  Identities=29%  Similarity=0.418  Sum_probs=141.5

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEe----CCeE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAH----DDTR  222 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~  222 (335)
                      .++|+..+.||+|++|.||+|... ++..||+|++....  ......+.+|+.++++++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            368888999999999999999864 68899999986432  2345667889999999999999999998763    3468


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++|+||+. ++|..++..   ...+++..+..++.|+++||.|||+.   +++||||||+||++++++.+||+|||++..
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccccee
Confidence            99999996 688888753   34599999999999999999999998   999999999999999999999999999865


Q ss_pred             CCCCCc----cccccccccCccccccccC
Q 019842          303 DGSQNK----NNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       303 ~~~~~~----~~~~~~gt~~y~aPE~l~~  327 (335)
                      ......    ......++..|+|||.+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (334)
T cd07855         157 LSSSPTEHKYFMTEYVATRWYRAPELLLS  185 (334)
T ss_pred             ecccCcCCCcccccccccccccChHHhcC
Confidence            432221    1123468889999999865


No 357
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94  E-value=1e-27  Score=237.61  Aligned_cols=175  Identities=33%  Similarity=0.478  Sum_probs=148.1

Q ss_pred             HhcCCcccceeeecccEEEEEEE-eCCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      .+-+++....||.|.||.||-|. .++|...|+|-+...  .......+.+|+.++..++|||+|+++|+-.+.+..++.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            34456778899999999999996 467889999977533  233456788999999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||||++|+|.+.+.   .+...++.....+..|++.|+.|||++   +||||||||.||+|+.+|.+|++|||.|+....
T Consensus      1313 MEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred             HHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence            99999999999984   456677888888999999999999999   999999999999999999999999999976543


Q ss_pred             CC----ccccccccccCccccccccCCc
Q 019842          306 QN----KNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       306 ~~----~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ..    ..-....||+.|||||++.+..
T Consensus      1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~ 1414 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTK 1414 (1509)
T ss_pred             chhcCCHHHHhhcCCchhcCchhhcccc
Confidence            32    1122457999999999997643


No 358
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94  E-value=1.2e-25  Score=207.53  Aligned_cols=174  Identities=30%  Similarity=0.415  Sum_probs=143.9

Q ss_pred             HHHHHHHhcCCcccceeeecccEEEEEEEe-CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeC
Q 019842          143 YKLLEKATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHD  219 (335)
Q Consensus       143 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~  219 (335)
                      ...+....++|...+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|++++.+++|+||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            345566789999999999999999999975 468899999986432  22345688999999999999999999988643


Q ss_pred             ------CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEE
Q 019842          220 ------DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAK  293 (335)
Q Consensus       220 ------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~k  293 (335)
                            +..++++|++ +++|.+.+..    ..+++..++.++.|+++||+|||+.   +++||||||+||++++++.+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence                  3468888887 6888877642    3589999999999999999999999   999999999999999999999


Q ss_pred             EEcccCceeCCCCCccccccccccCccccccccC
Q 019842          294 LSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       294 l~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      |+|||++......   .....++..|+|||.+.+
T Consensus       161 l~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         161 ILDFGLARHTDDE---MTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             Eeccccccccccc---ccccccCCCccCHHHHhC
Confidence            9999998654322   123467889999998865


No 359
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=2e-27  Score=211.11  Aligned_cols=177  Identities=27%  Similarity=0.329  Sum_probs=150.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..+|....+||+|+||+|.+|..+ +.+.+|||+++..-   .++.+--+.|-++|+.- +-|.++++..+++.-+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            357888999999999999999765 46789999986542   22334445677777766 56899999999999999999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||||+.+|+|-.+++.   -..+.+..+..+|.+||-||-+||++   +|++||||.+||+||.+|.+||+|||+++..-
T Consensus       428 VMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             EEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence            9999999999877753   35577888999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCccccccccccCccccccccCCcCcc
Q 019842          305 SQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       305 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .....+.+++||+.|+|||.+.-++|+.
T Consensus       502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgk  529 (683)
T KOG0696|consen  502 FDGVTTKTFCGTPDYIAPEIIAYQPYGK  529 (683)
T ss_pred             cCCcceeeecCCCcccccceEEeccccc
Confidence            5566666889999999999999999975


No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.94  E-value=4.3e-26  Score=203.74  Aligned_cols=170  Identities=34%  Similarity=0.489  Sum_probs=143.7

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      |+..+.||+|++|.||+|+.. +++.+++|.+....  ......+.+|++++++++|+|++++++++.+.+..++|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            455678999999999999876 48899999987543  333467889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      + ++|.+++...  ...+++..+..++.|+++||+|||++   +++||||+|+||++++++.+||+|||++.........
T Consensus        81 ~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  154 (282)
T cd07829          81 D-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT  154 (282)
T ss_pred             C-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence            8 5899988642  24699999999999999999999999   9999999999999999999999999998765443322


Q ss_pred             ccccccccCccccccccCC
Q 019842          310 NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....++..|+|||.+.++
T Consensus       155 ~~~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         155 YTHEVVTLWYRAPEILLGS  173 (282)
T ss_pred             cCccccCcCcCChHHhcCC
Confidence            2233467789999998765


No 361
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.94  E-value=6.4e-27  Score=190.62  Aligned_cols=185  Identities=26%  Similarity=0.390  Sum_probs=147.3

Q ss_pred             HHHHhcCCcccceeeecccEEEEEEEe-CCCceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeE
Q 019842          146 LEKATDSFHESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       146 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  222 (335)
                      ++...++......||+|++|.|-+-++ .+|...|+|++... ..+..++..+|+++..+- ..|.+|.++|...+....
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            344445555567799999999988775 47899999999654 344567788899877665 799999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          223 FIVYELMENRSLDIQLHG-PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      |+.||.|+ -+|+.+-.. -.++..+++...-+|+..+.+||.|||++.  .++|||+||+||||+.+|++|+||||.+-
T Consensus       121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG  197 (282)
T ss_pred             EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence            99999996 566544321 245678999999999999999999999986  89999999999999999999999999997


Q ss_pred             eCCCCCccccccccccCccccccccCCcCc-ccc
Q 019842          302 TDGSQNKNNLKLSGTLGYVAPEYLLDGMVG-KFL  334 (335)
Q Consensus       302 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~~  334 (335)
                      ...+.-..+ ...|-..|||||.+..+.-. .|+
T Consensus       198 ~L~dSiAkt-~daGCkpYmaPEri~~e~n~~gY~  230 (282)
T KOG0984|consen  198 YLVDSIAKT-MDAGCKPYMAPERINPELNQKGYS  230 (282)
T ss_pred             eehhhhHHH-HhcCCCccCChhhcCcccCcccce
Confidence            765543332 23688899999999766543 444


No 362
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94  E-value=7.8e-26  Score=202.40  Aligned_cols=170  Identities=31%  Similarity=0.407  Sum_probs=141.5

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEEEec
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      |+..+.||+|++|.||+|... +++.|++|++..... .......+|+..+++++ |+|++++++++.+++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456788999999999999875 478899999864422 22334567999999999 999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                       +|+|.+++.... ...+++..++.++.|++++|.|||++   +++|+||+|+||++++++.++|+|||++.........
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY  155 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence             789988886432 35689999999999999999999999   9999999999999999999999999998765432221


Q ss_pred             ccccccccCccccccccCC
Q 019842          310 NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~  328 (335)
                       ....++..|+|||++.++
T Consensus       156 -~~~~~~~~~~aPE~~~~~  173 (283)
T cd07830         156 -TDYVSTRWYRAPEILLRS  173 (283)
T ss_pred             -CCCCCcccccCceeeecC
Confidence             223578899999988543


No 363
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94  E-value=7.2e-26  Score=202.39  Aligned_cols=170  Identities=31%  Similarity=0.496  Sum_probs=143.7

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      |+..+.||+|++|.||+|... +++.+++|++.....  .....+.+|++++++++|+||+++++++.+++..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456778999999999999875 688899999865432  24567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcc
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN  309 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  309 (335)
                      ++ +|...+..  ....+++..++.++.|+++||.|||+.   +++|+||+|+||++++++.+||+|||.+.........
T Consensus        81 ~~-~l~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~  154 (283)
T cd05118          81 DT-DLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP  154 (283)
T ss_pred             CC-CHHHHHHh--hcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence            75 88777753  235789999999999999999999999   9999999999999999999999999998766544322


Q ss_pred             ccccccccCccccccccCC
Q 019842          310 NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~~~  328 (335)
                      .....++..|+|||.+.+.
T Consensus       155 ~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         155 YTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             ccCccCcccccCcHHHhcC
Confidence            2234578899999998765


No 364
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.94  E-value=9.9e-26  Score=197.85  Aligned_cols=166  Identities=32%  Similarity=0.385  Sum_probs=142.5

Q ss_pred             eeecccEEEEEEEeC-CCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCH
Q 019842          159 LGEGGFGCVYKAKLD-DNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      ||+|+||.||++... +++.+++|.+....   ......+.+|++++++++|+|++++++.+..++..+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999875 48899999886442   22456789999999999999999999999999999999999999999


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .+++..   ...+++.....++.|+++||.|||+.   +++|+||+|+||++++++.++|+|||++..............
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~  154 (250)
T cd05123          81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC  154 (250)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence            999853   23689999999999999999999998   999999999999999999999999999866544322333456


Q ss_pred             cccCccccccccCCcC
Q 019842          315 GTLGYVAPEYLLDGMV  330 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~  330 (335)
                      ++..|+|||...+...
T Consensus       155 ~~~~~~~Pe~~~~~~~  170 (250)
T cd05123         155 GTPEYLAPEVLLGKGY  170 (250)
T ss_pred             CCccccChHHhCCCCC
Confidence            8889999999877654


No 365
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94  E-value=6.1e-26  Score=203.79  Aligned_cols=172  Identities=30%  Similarity=0.407  Sum_probs=139.0

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccC-chhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCAT-QDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +|...+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4555778999999999999865 57899999986443 345567899999999996 99999999999999999999999


Q ss_pred             cCCCCHhHH---hcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          229 MENRSLDIQ---LHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       229 ~~~g~L~~~---l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +.. ++.++   +.. .....+++..+..++.|++.||+|||+..  +++||||||+||++++++.+||+|||++.....
T Consensus        85 ~~~-~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  160 (288)
T cd06616          85 MDI-SLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD  160 (288)
T ss_pred             ccC-CHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence            864 54433   221 22356999999999999999999999742  899999999999999999999999999865433


Q ss_pred             CCccccccccccCccccccccCC
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .... ....|+..|+|||++.++
T Consensus       161 ~~~~-~~~~~~~~y~aPE~~~~~  182 (288)
T cd06616         161 SIAK-TRDAGCRPYMAPERIDPS  182 (288)
T ss_pred             CCcc-ccccCccCccCHHHhccc
Confidence            2221 223578899999999776


No 366
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=6.6e-27  Score=209.49  Aligned_cols=174  Identities=32%  Similarity=0.453  Sum_probs=142.8

Q ss_pred             cCCcccceeeecccEEEEEEE-eCCCceEEEEEeccc-C------chhHHHHHHHHHHHhcCCCCceeEEeeEEEe-CCe
Q 019842          151 DSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCA-T------QDAGREFENEVDLLSNIHHPNVVCLLGYSAH-DDT  221 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~-~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~  221 (335)
                      ++|-..++||+|||+.||+|. +...+-||||+-... +      ....+...+|.++-+.|+||.||++|+++.- .+.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            345556789999999999995 556788999976322 1      1223457899999999999999999999875 467


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC---CCcEEEEccc
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS---KFNAKLSDFG  298 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~---~~~~kl~Dfg  298 (335)
                      .|-|+|||++.+|+-+|.   ....+++.++..|++||..||.||.+. .++|||-||||.||||-+   -|.+||.|||
T Consensus       543 FCTVLEYceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ceeeeeecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            889999999999999985   345689999999999999999999986 779999999999999955   4789999999


Q ss_pred             CceeCCCCCcc-------ccccccccCccccccccCC
Q 019842          299 LAITDGSQNKN-------NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       299 la~~~~~~~~~-------~~~~~gt~~y~aPE~l~~~  328 (335)
                      +++........       +....||.+|++||.+.-+
T Consensus       619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVg  655 (775)
T KOG1151|consen  619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVG  655 (775)
T ss_pred             hhhhccCCccCcccceeeecccCceeeecCcceeecC
Confidence            99776544332       2345799999999998665


No 367
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94  E-value=2e-25  Score=199.94  Aligned_cols=173  Identities=32%  Similarity=0.439  Sum_probs=140.5

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcC---CCCceeEEeeEEEeCCe-----
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNI---HHPNVVCLLGYSAHDDT-----  221 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~-----  221 (335)
                      |+..+.||+|+||.||+|+.. +++.||+|++.....  .....+.+|++++.++   +|+|++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            566789999999999999986 488999999964322  2234566788777665   69999999999998876     


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      .+++|||++ ++|.+++... ....+++..++.++.|+++||+|||+.   +++|+||+|+||++++++.+||+|||++.
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~-~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKC-PKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcce
Confidence            999999997 5788877542 234689999999999999999999999   99999999999999999999999999986


Q ss_pred             eCCCCCccccccccccCccccccccCCcCc
Q 019842          302 TDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       302 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ........ ....++..|+|||++.++.++
T Consensus       156 ~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~  184 (287)
T cd07838         156 IYSFEMAL-TSVVVTLWYRAPEVLLQSSYA  184 (287)
T ss_pred             eccCCccc-ccccccccccChHHhccCCCC
Confidence            65433221 223478899999999876653


No 368
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.94  E-value=1.2e-25  Score=204.25  Aligned_cols=167  Identities=32%  Similarity=0.464  Sum_probs=140.0

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      +.|+..+.||+|+||.||+|+.. ++..+++|.+...   .....+++.+|++++++++|+|++++++++...+..++|+
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            34666788999999999999865 5788999988532   2334467889999999999999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+. |++.+.+..  ....+++..+..++.|++.||.|||+.   +++||||+|+||++++++.+||+|||++......
T Consensus        95 e~~~-~~l~~~~~~--~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          95 EYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             EccC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            9997 677766643  234689999999999999999999998   9999999999999999999999999998654332


Q ss_pred             CccccccccccCccccccccC
Q 019842          307 NKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      .    ...++..|+|||++.+
T Consensus       169 ~----~~~~~~~y~aPE~~~~  185 (308)
T cd06634         169 N----XFVGTPYWMAPEVILA  185 (308)
T ss_pred             c----cccCCccccCHHHHhh
Confidence            2    2357889999999853


No 369
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.94  E-value=9.4e-27  Score=197.01  Aligned_cols=175  Identities=29%  Similarity=0.416  Sum_probs=145.0

Q ss_pred             ccceeeecccEEEEEEEeC-CCceEEEEEeccc-CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          155 ESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA-TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ....||.|..|.|++++.. +|..+|||.+... +.+..++++..++++.+- +.|.||+.+|||..+...++.||.|. 
T Consensus        96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-  174 (391)
T KOG0983|consen   96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-  174 (391)
T ss_pred             hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence            3556999999999999875 5889999999654 566678888999888776 48999999999999999999999985 


Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      -.++..+.  +...++++..+-++...+.+||.||.++.  +|+|||+||+|||+|+.|++|++|||.+-...+.... .
T Consensus       175 ~C~ekLlk--rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh-t  249 (391)
T KOG0983|consen  175 TCAEKLLK--RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH-T  249 (391)
T ss_pred             HHHHHHHH--HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccccc-c
Confidence            23444443  23456899999999999999999999875  9999999999999999999999999998555443332 2


Q ss_pred             ccccccCccccccccCCcCccccC
Q 019842          312 KLSGTLGYVAPEYLLDGMVGKFLI  335 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~~~~~  335 (335)
                      .-.|-+.|||||.+--.....|||
T Consensus       250 rsAGC~~YMaPERidp~~~~kYDi  273 (391)
T KOG0983|consen  250 RSAGCAAYMAPERIDPPDKPKYDI  273 (391)
T ss_pred             cccCCccccCccccCCCCCCccch
Confidence            347899999999998888888886


No 370
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93  E-value=1.2e-25  Score=202.81  Aligned_cols=174  Identities=30%  Similarity=0.447  Sum_probs=140.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccC-chhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCAT-QDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~  226 (335)
                      .++|+..+.||+|++|.||+|..++ ++.||||.+.... .....++.+|+.++.+.. |+||+++++++.++...+++|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3567888999999999999999865 8899999986543 234456777888777774 999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||++ +++.+.+..  ....+++..+..++.|+++||+|||+..  +++||||+|+||++++++.+||+|||++......
T Consensus        94 e~~~-~~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          94 ELMS-TCLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             eccC-cCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            9985 466665543  2347899999999999999999999732  8999999999999999999999999998654332


Q ss_pred             CccccccccccCccccccccCCc
Q 019842          307 NKNNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       307 ~~~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      ... ....++..|+|||++.+..
T Consensus       169 ~~~-~~~~~~~~y~aPE~~~~~~  190 (296)
T cd06618         169 KAK-TRSAGCAAYMAPERIDPPD  190 (296)
T ss_pred             Ccc-cCCCCCccccCHhhcCCCC
Confidence            222 2235788999999987654


No 371
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93  E-value=1e-25  Score=204.89  Aligned_cols=168  Identities=23%  Similarity=0.260  Sum_probs=136.3

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      .+.+|.|+++.||+++. +++.||+|++...  .....+.+.+|++++++++|+||+++++++.+++..+++|||+++|+
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            34455556666666554 6889999998654  34456789999999999999999999999999999999999999999


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc-----
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK-----  308 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-----  308 (335)
                      |.+++... ....+++.....++.|+++||+|||+.   +|+||||||+||++++++.+||+|||.+........     
T Consensus        86 l~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~  161 (314)
T cd08216          86 CEDLLKTH-FPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV  161 (314)
T ss_pred             HHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence            99998642 234688999999999999999999999   999999999999999999999999998854322111     


Q ss_pred             --cccccccccCccccccccCC
Q 019842          309 --NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       309 --~~~~~~gt~~y~aPE~l~~~  328 (335)
                        ......++..|+|||++...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~  183 (314)
T cd08216         162 HDFPKSSVKNLPWLSPEVLQQN  183 (314)
T ss_pred             ccccccccccccccCHHHhcCC
Confidence              11123467789999998653


No 372
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.93  E-value=2.5e-25  Score=203.92  Aligned_cols=169  Identities=31%  Similarity=0.445  Sum_probs=141.5

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEe-CCeEE
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAH-DDTRF  223 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~  223 (335)
                      ..+++|+..+.||+|+||.||+|... ++..||+|++...  .....+.+.+|++++++++||||+++.+++.. .+..+
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            35788999999999999999999755 7889999988532  22345678899999999999999999999876 45789


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +++||+ +++|...+..    ..+++.....++.|+++||+|||+.   +++||||+|+||++++++.+||+|||++...
T Consensus        87 lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          87 FVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             EEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            999998 4688877742    3578888999999999999999999   9999999999999999999999999998654


Q ss_pred             CCCCccccccccccCccccccccC
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      ....   ....++..|+|||.+.+
T Consensus       159 ~~~~---~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         159 DPQM---TGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             CCCc---CCCcccccccCceeeec
Confidence            3221   22357889999999866


No 373
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.93  E-value=1e-26  Score=199.05  Aligned_cols=173  Identities=28%  Similarity=0.333  Sum_probs=141.6

Q ss_pred             hcCCccc-ceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEe----CCeE
Q 019842          150 TDSFHES-NILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAH----DDTR  222 (335)
Q Consensus       150 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~----~~~~  222 (335)
                      +++|.+. ++||-|-.|.|..+..+ +++.+|+|++.     +....++|+++--+. .|||||.++++++.    .+.+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            4566543 68999999999988654 68899999885     224457788876555 69999999998764    3578


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC---CCcEEEEcccC
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS---KFNAKLSDFGL  299 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~---~~~~kl~Dfgl  299 (335)
                      ++|||.|+||.|...++.+ ....+++.++-.|+.||+.|+.|||+.   +|.||||||+|+|...   |-.+||+|||+
T Consensus       135 LiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF  210 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF  210 (400)
T ss_pred             EeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence            8999999999999998763 456799999999999999999999999   9999999999999964   56799999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCCcCcc
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      |+....... ..+.+-|+.|.|||++-..+|+.
T Consensus       211 AK~t~~~~~-L~TPc~TPyYvaPevlg~eKydk  242 (400)
T KOG0604|consen  211 AKETQEPGD-LMTPCFTPYYVAPEVLGPEKYDK  242 (400)
T ss_pred             ccccCCCcc-ccCCcccccccCHHHhCchhcCC
Confidence            987654332 23457899999999998888654


No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93  E-value=8.2e-26  Score=199.87  Aligned_cols=176  Identities=27%  Similarity=0.376  Sum_probs=141.3

Q ss_pred             CCcccceeeecccEEEEEEEeCC-CceEEEEEeccc-----CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCA-----TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv  225 (335)
                      +|...+.||+|+||.||++.... +..+++|.++..     ......++.+|+.++++++||||+++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            46778899999999999997653 344555554321     223345677899999999999999999999999999999


Q ss_pred             EEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          226 YELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      +||+++++|.+.+... .....+++..++.++.|+++||.|||+.   +++|+||+|+||++++ +.+||+|||++....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999887531 2345799999999999999999999999   9999999999999976 569999999986654


Q ss_pred             CCCccccccccccCccccccccCCcCc
Q 019842          305 SQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ..........++..|+|||.+.+..++
T Consensus       157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~  183 (260)
T cd08222         157 GSCDLATTFTGTPYYMSPEALKHQGYD  183 (260)
T ss_pred             CCcccccCCCCCcCccCHHHHccCCCC
Confidence            333333344688899999998766543


No 375
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.93  E-value=2.8e-25  Score=200.48  Aligned_cols=177  Identities=22%  Similarity=0.313  Sum_probs=128.9

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCCC----ceEEEEEecccCchhH-----------HHHHHHHHHHhcCCCCceeEEe
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDDN----LHVAVKKLDCATQDAG-----------REFENEVDLLSNIHHPNVVCLL  213 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l~  213 (335)
                      ..++|+..++||+|+||.||+|...++    ..+++|..........           .....+...+..++|+|+++++
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   89 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY   89 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence            346789999999999999999987543    4556665432221111           1122334456677899999999


Q ss_pred             eEEEeCC----eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC
Q 019842          214 GYSAHDD----TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK  289 (335)
Q Consensus       214 g~~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~  289 (335)
                      +++....    ..++++|++. .++.+.+..   ....++..+..++.|+++||+|||+.   +++||||||+|||++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~  162 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN  162 (294)
T ss_pred             EeeeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence            9876554    4477888764 355555532   23357888999999999999999999   99999999999999999


Q ss_pred             CcEEEEcccCceeCCCCC-------ccccccccccCccccccccCCcCcc
Q 019842          290 FNAKLSDFGLAITDGSQN-------KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       290 ~~~kl~Dfgla~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      +.+||+|||+|+......       .......||+.|+|||+..+..++.
T Consensus       163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~  212 (294)
T PHA02882        163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTR  212 (294)
T ss_pred             CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCc
Confidence            999999999996543211       1112246999999999998877654


No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.93  E-value=2.6e-25  Score=204.01  Aligned_cols=170  Identities=29%  Similarity=0.407  Sum_probs=137.5

Q ss_pred             CCcccceeeecccEEEEEEEeC-C--CceEEEEEeccc--CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeC----Ce
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-D--NLHVAVKKLDCA--TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHD----DT  221 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~  221 (335)
                      +|...+.||+|+||.||+++.. +  +..||+|++...  .....+.+.+|+++++++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4677889999999999999865 3  678999998643  223356788999999999 599999999976433    45


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      .++++||++ ++|.+.+..   ...+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||+++
T Consensus        81 ~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            788999986 688888743   45689999999999999999999999   99999999999999999999999999996


Q ss_pred             eCCCCCc----cccccccccCccccccccCC
Q 019842          302 TDGSQNK----NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       302 ~~~~~~~----~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .......    ......|+..|+|||++.++
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  184 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIMLSF  184 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHhCC
Confidence            5432211    11234688999999987653


No 377
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93  E-value=5.3e-26  Score=211.22  Aligned_cols=143  Identities=26%  Similarity=0.344  Sum_probs=126.8

Q ss_pred             CCcccceeeecccEEEEEEE-eCCCceEEEEEecccC---chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCAT---QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      -|...+.||-|+||+|.+++ .++...+|.|.++..+   .+....++.|.+||+.-+.+-||+|+-.|.+++.+|+|||
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            35567889999999999995 5567788999886543   3445668899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      |+++|++-.+|-.   -+.+++..+..++.++.+|+++.|..   |+|||||||+|||||.+|.+||+||||+
T Consensus       710 YIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             ccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccc
Confidence            9999999888753   35688888889999999999999999   9999999999999999999999999997


No 378
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93  E-value=3e-25  Score=204.52  Aligned_cols=167  Identities=28%  Similarity=0.407  Sum_probs=138.5

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC------
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD------  220 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  220 (335)
                      .++|...+.||+|+||.||+|... +++.||+|++...  .......+.+|++++++++|+||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            468989999999999999999864 6899999998643  2223456889999999999999999999987543      


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      ..++|+||+. .+|....     ...+++..+..++.|++.||+|||+.   +++||||||+||++++++.+||+|||++
T Consensus        94 ~~~lv~e~~~-~~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQ-TDLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEecccc-cCHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence            4699999996 4676554     23588999999999999999999999   9999999999999999999999999998


Q ss_pred             eeCCCCCccccccccccCccccccccCC
Q 019842          301 ITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       301 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      +......   ....++..|+|||++.++
T Consensus       165 ~~~~~~~---~~~~~~~~y~aPE~~~~~  189 (342)
T cd07879         165 RHADAEM---TGYVVTRWYRAPEVILNW  189 (342)
T ss_pred             cCCCCCC---CCceeeecccChhhhcCc
Confidence            6543221   233578899999998763


No 379
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.93  E-value=3.3e-25  Score=203.02  Aligned_cols=167  Identities=23%  Similarity=0.313  Sum_probs=134.9

Q ss_pred             eeeec--ccEEEEEEEeC-CCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCC
Q 019842          158 ILGEG--GFGCVYKAKLD-DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       158 ~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      .||+|  +||+||+++.. +++.||+|.+....  ....+.+.+|+.+++.++||||+++++++..++..++|+||+.++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  89999999874 78999999986432  233467899999999999999999999999999999999999999


Q ss_pred             CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCc-c--
Q 019842          233 SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNK-N--  309 (335)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~--  309 (335)
                      +|.+++... ....+++..+..++.|++.||+|||+.   +++||||||+||++++++.+|++||+.+........ .  
T Consensus        85 ~l~~~l~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (328)
T cd08226          85 SANSLLKTY-FPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV  160 (328)
T ss_pred             CHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence            999888642 234589999999999999999999998   999999999999999999999999985422111000 0  


Q ss_pred             ----ccccccccCccccccccCC
Q 019842          310 ----NLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       310 ----~~~~~gt~~y~aPE~l~~~  328 (335)
                          .....++..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~  183 (328)
T cd08226         161 VYDFPQFSTSVLPWLSPELLRQD  183 (328)
T ss_pred             cccccccccCccCccChhhhcCC
Confidence                0011345679999999764


No 380
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.93  E-value=2.4e-25  Score=201.80  Aligned_cols=173  Identities=32%  Similarity=0.425  Sum_probs=138.9

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc--hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC------
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ--DAGREFENEVDLLSNIHHPNVVCLLGYSAHDD------  220 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------  220 (335)
                      .++|...+.||+|+||.||+|... +++.+++|++.....  .....+.+|++++++++|+||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            468889999999999999999865 578999998854322  22346788999999999999999999875433      


Q ss_pred             --eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEccc
Q 019842          221 --TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFG  298 (335)
Q Consensus       221 --~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg  298 (335)
                        ..++|+||++. ++...+..  ....+++..+..++.|+++||+|||+.   +++||||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence              46999999974 66666653  234699999999999999999999999   99999999999999999999999999


Q ss_pred             CceeCCCCCc-----------cccccccccCccccccccCC
Q 019842          299 LAITDGSQNK-----------NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       299 la~~~~~~~~-----------~~~~~~gt~~y~aPE~l~~~  328 (335)
                      +++.......           ......++..|+|||.+.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE  201 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCC
Confidence            9865432211           11123467889999988654


No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=4.7e-26  Score=197.78  Aligned_cols=177  Identities=23%  Similarity=0.354  Sum_probs=154.5

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRF  223 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  223 (335)
                      ..++|...++||+|+|++|..+++. +.+.+|+|+++..   ..++.+..+.|-.++.+- +||.+|.|..++.....++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            4578889999999999999999875 5678899988643   344556678888888766 7999999999999999999


Q ss_pred             EEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          224 IVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       224 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +|.||+++|+|--+++   ....|+++.+..+...|.-||.|||++   +|++||||.+|+|||.+|.+||+|+|+++..
T Consensus       328 fvieyv~ggdlmfhmq---rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEEEecCcceeeehh---hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence            9999999999966554   345699999999999999999999999   9999999999999999999999999999876


Q ss_pred             CCCCccccccccccCccccccccCCcCc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ......+.+++||+.|+|||.+.+..|+
T Consensus       402 l~~gd~tstfcgtpnyiapeilrgeeyg  429 (593)
T KOG0695|consen  402 LGPGDTTSTFCGTPNYIAPEILRGEEYG  429 (593)
T ss_pred             CCCCcccccccCCCcccchhhhcccccC
Confidence            6666667789999999999999999886


No 382
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.93  E-value=4.3e-25  Score=203.47  Aligned_cols=171  Identities=27%  Similarity=0.366  Sum_probs=139.8

Q ss_pred             hcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC---------
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD---------  219 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---------  219 (335)
                      ..+|...+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            357888999999999999999864 5889999998766556667789999999999999999999776543         


Q ss_pred             -----CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEE
Q 019842          220 -----DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAK  293 (335)
Q Consensus       220 -----~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~k  293 (335)
                           ...++|+||++ ++|.+++..    ..+++..+..++.|+++||+|||+.   +++||||||+||+++. ++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence                 35799999997 588877742    3588999999999999999999999   9999999999999974 56799


Q ss_pred             EEcccCceeCCCCCc---cccccccccCccccccccCC
Q 019842          294 LSDFGLAITDGSQNK---NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       294 l~Dfgla~~~~~~~~---~~~~~~gt~~y~aPE~l~~~  328 (335)
                      |+|||++........   ......++..|+|||.+.++
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  193 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP  193 (342)
T ss_pred             ECCcccceecCCccccccccccccccccccCHHHHhCc
Confidence            999999865432211   11122478899999987653


No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.92  E-value=8.4e-27  Score=196.56  Aligned_cols=174  Identities=29%  Similarity=0.386  Sum_probs=140.2

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEecccCc-hhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQ-DAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +.+....||.|+||+|+|-.++ .|+.+|||+++.... .++++++.|.+...+- +.||||+++|.+...+..|+.||+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            3344667999999999998765 689999999976543 5677889998866555 789999999999999999999999


Q ss_pred             cCCCCHhH---HhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          229 MENRSLDI---QLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       229 ~~~g~L~~---~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      |+ -+++.   +.+. .....+++...-.|.....+||.||-+..  .|+|||+||+||||+..|.+||+|||.+.+...
T Consensus       145 Md-~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  145 MD-ISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             Hh-hhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence            96 45543   3332 23456899999999999999999998765  899999999999999999999999999866544


Q ss_pred             CCccccccccccCccccccccCCcC
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ....+ ...|-..|||||.+....-
T Consensus       221 SiAkT-~daGCrpYmAPERi~p~~~  244 (361)
T KOG1006|consen  221 SIAKT-VDAGCRPYMAPERIDPSDK  244 (361)
T ss_pred             HHHhh-hccCCccccChhccCCccC
Confidence            43332 3468889999999976543


No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.92  E-value=9e-25  Score=190.92  Aligned_cols=156  Identities=22%  Similarity=0.205  Sum_probs=129.9

Q ss_pred             cccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcC
Q 019842          162 GGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHG  240 (335)
Q Consensus       162 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~  240 (335)
                      |.+|.||+++.. +++.+|+|++....     .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            889999999864 67899999986432     234455556666799999999999999999999999999999998853


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccccccCcc
Q 019842          241 PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLSGTLGYV  320 (335)
Q Consensus       241 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~  320 (335)
                         ...+++..+..++.|+++||+|||+.   +++||||||+||++++++.++++|||++........   ...++..|+
T Consensus        79 ---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~y~  149 (237)
T cd05576          79 ---FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD---GEAVENMYC  149 (237)
T ss_pred             ---hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccc---cCCcCcccc
Confidence               23589999999999999999999998   999999999999999999999999998755433221   234577899


Q ss_pred             ccccccCCcCc
Q 019842          321 APEYLLDGMVG  331 (335)
Q Consensus       321 aPE~l~~~~~~  331 (335)
                      |||.+.++.++
T Consensus       150 aPE~~~~~~~~  160 (237)
T cd05576         150 APEVGGISEET  160 (237)
T ss_pred             CCcccCCCCCC
Confidence            99998776654


No 385
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92  E-value=5.2e-25  Score=194.65  Aligned_cols=186  Identities=27%  Similarity=0.342  Sum_probs=154.7

Q ss_pred             HHHHHHhcCCcccceeeecccEEEEEEEeC------CCceEEEEEecc-cCchhHHHHHHHHHHHhcCCCCceeEEeeEE
Q 019842          144 KLLEKATDSFHESNILGEGGFGCVYKAKLD------DNLHVAVKKLDC-ATQDAGREFENEVDLLSNIHHPNVVCLLGYS  216 (335)
Q Consensus       144 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~  216 (335)
                      +++.....++....++.+|.||.||+|.+.      +.+.|.+|.++. +++-....+..|.-.+..+.|||+..+.|++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            445555667888889999999999999553      456677887753 3555667899999999999999999999998


Q ss_pred             EeC-CeEEEEEEecCCCCHhHHhc-----CCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC
Q 019842          217 AHD-DTRFIVYELMENRSLDIQLH-----GPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF  290 (335)
Q Consensus       217 ~~~-~~~~lv~E~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~  290 (335)
                      .++ +..+.+|.++.-|+|..+|.     .......++..+...++.|++.||+|||.+   ++||.||.++|++||+..
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~L  433 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQL  433 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhhe
Confidence            765 57899999999999999998     455566789999999999999999999999   999999999999999999


Q ss_pred             cEEEEcccCceeCCCCCcccc--ccccccCccccccccCCcCcc
Q 019842          291 NAKLSDFGLAITDGSQNKNNL--KLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       291 ~~kl~Dfgla~~~~~~~~~~~--~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ++||+|-.+++...+.+....  .-.....||+||.+.+..|+.
T Consensus       434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yss  477 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSS  477 (563)
T ss_pred             eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcc
Confidence            999999999988765544321  112467899999999998864


No 386
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.92  E-value=6.6e-25  Score=202.32  Aligned_cols=169  Identities=30%  Similarity=0.418  Sum_probs=142.3

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCe----
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDT----  221 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----  221 (335)
                      ..++|+..+.||+|++|.||+|+.. ++..||+|++...  .......+.+|+.++++++|+|++++.+++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4568889999999999999999875 5789999998643  23344667889999999999999999998776654    


Q ss_pred             --EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          222 --RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       222 --~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                        .++|+||+ +++|.+++..    ..+++..+..++.|+++||+|||+.   +++||||+|+||++++++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccc
Confidence              89999998 5689888753    4689999999999999999999999   999999999999999999999999999


Q ss_pred             ceeCCCCCccccccccccCccccccccCC
Q 019842          300 AITDGSQNKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       300 a~~~~~~~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      +......   .....++..|+|||.+.++
T Consensus       165 ~~~~~~~---~~~~~~~~~y~aPE~~~~~  190 (343)
T cd07851         165 ARHTDDE---MTGYVATRWYRAPEIMLNW  190 (343)
T ss_pred             ccccccc---ccCCcccccccCHHHHhCC
Confidence            8665332   1233578899999998653


No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2.1e-26  Score=209.16  Aligned_cols=173  Identities=27%  Similarity=0.329  Sum_probs=148.9

Q ss_pred             CCcccceeeecccEEEEEEEeCCCc-eEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLDDNL-HVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      +++....||-|+||.|-.++.+... .+|+|.++..   .......+..|-.+|...+.|.||++|-.+.+++..|+.||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            4445567999999999999876543 3777766543   34455678899999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      -|-+|.|...|+.   .+.++......++..+.+|++|||.+   +||+|||||+|++||.+|.+||.|||+|+..+...
T Consensus       501 aClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  501 ACLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hhcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence            9999999999954   45688889999999999999999999   99999999999999999999999999998887665


Q ss_pred             ccccccccccCccccccccCCcCc
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .. -+++||+.|.|||.+.+.-..
T Consensus       575 KT-wTFcGTpEYVAPEIILnKGHD  597 (732)
T KOG0614|consen  575 KT-WTFCGTPEYVAPEIILNKGHD  597 (732)
T ss_pred             ce-eeecCCcccccchhhhccCcc
Confidence            54 468999999999999887543


No 388
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92  E-value=9.8e-25  Score=200.25  Aligned_cols=174  Identities=26%  Similarity=0.317  Sum_probs=144.5

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEEec--ccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLD--CATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ..|++.+.||.||.+.||++...+.+.+|+|++.  ..+.+...-|.+|+..|.+| .|.+|++|++|...++.+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            4577789999999999999999888899998874  34555678899999999999 59999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      |= .-+|...|...  ...++...+..+..||+.++.+.|++   +|||.||||.|+|+-+ |.+||+|||.|.......
T Consensus       441 ~G-d~DL~kiL~k~--~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  441 CG-DIDLNKILKKK--KSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             cc-cccHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence            85 46898888642  23333237788999999999999999   9999999999999864 589999999996554332


Q ss_pred             --ccccccccccCccccccccCCcCc
Q 019842          308 --KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       308 --~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                        ......+||+.||+||.+.....+
T Consensus       514 TsI~kdsQvGT~NYMsPEAl~~~~s~  539 (677)
T KOG0596|consen  514 TSIVKDSQVGTVNYMSPEALTDMSSS  539 (677)
T ss_pred             cceeeccccCcccccCHHHHhhcccc
Confidence              233355899999999999877665


No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.92  E-value=1.6e-24  Score=210.97  Aligned_cols=173  Identities=23%  Similarity=0.248  Sum_probs=121.2

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-C----CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeE------EE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-D----NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGY------SA  217 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~------~~  217 (335)
                      ..++|+..+.||+|+||.||+|++. +    +..||+|++......  ....+|  .+....+.++..+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            4578999999999999999999875 4    689999987643221  111111  1122222222222111      34


Q ss_pred             eCCeEEEEEEecCCCCHhHHhcCCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC
Q 019842          218 HDDTRFIVYELMENRSLDIQLHGPSHG-----------------SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLK  280 (335)
Q Consensus       218 ~~~~~~lv~E~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk  280 (335)
                      +.+..++|+||+++++|.+++......                 .......+..++.|+++||+|||++   +|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence            567899999999999999888642210                 1112344668999999999999999   99999999


Q ss_pred             CCCEEEcC-CCcEEEEcccCceeCCCC-CccccccccccCccccccccCC
Q 019842          281 SSNILLDS-KFNAKLSDFGLAITDGSQ-NKNNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       281 ~~Nill~~-~~~~kl~Dfgla~~~~~~-~~~~~~~~gt~~y~aPE~l~~~  328 (335)
                      |+|||+++ ++.+||+|||+|+..... ........+++.|||||.+...
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~  332 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMS  332 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhcc
Confidence            99999986 589999999999754322 2222345789999999976543


No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92  E-value=8.5e-27  Score=195.20  Aligned_cols=171  Identities=28%  Similarity=0.411  Sum_probs=135.6

Q ss_pred             CcccceeeecccEEEEEEEeC-CCceEEEEEecc--cCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeC--------Ce
Q 019842          153 FHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDC--ATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHD--------DT  221 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------~~  221 (335)
                      |....+||+|.||.||+|+.. +++.||+|++-.  ....--....+|+.+|..++|+|++.++..|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            444567999999999999764 577889887632  2222334568999999999999999999988643        35


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      .|+|+++|+ -+|.-.|..  ....++..++.+++.++.+||.|+|..   .|+|||+|+.|+||+.++.+||+|||+++
T Consensus        99 ~ylVf~~ce-hDLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar  172 (376)
T KOG0669|consen   99 FYLVFDFCE-HDLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLAR  172 (376)
T ss_pred             eeeeHHHhh-hhHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccc
Confidence            899999997 467766653  235688999999999999999999999   99999999999999999999999999996


Q ss_pred             eCCCCCc----cccccccccCccccccccCCc
Q 019842          302 TDGSQNK----NNLKLSGTLGYVAPEYLLDGM  329 (335)
Q Consensus       302 ~~~~~~~----~~~~~~gt~~y~aPE~l~~~~  329 (335)
                      .+.....    ..+....|.+|.+||.+.+.+
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r  204 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR  204 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHHhhccc
Confidence            5432221    122335699999999997753


No 391
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92  E-value=3.8e-26  Score=213.33  Aligned_cols=176  Identities=29%  Similarity=0.399  Sum_probs=157.2

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ..++|+....+|.|.||.||||+.. +++..|+|.++..-.+...-.++|+-+++.-+||||+.++|.+...+..|+.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            4568888999999999999999864 688999999988777777888999999999999999999999999999999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN  307 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~  307 (335)
                      ||.+|+|.+.-+.   ..++++.+....++...+||+|||+.   +=+|||||-.|||+++.+.+|++|||.+-..+..-
T Consensus        93 ycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati  166 (829)
T KOG0576|consen   93 YCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATI  166 (829)
T ss_pred             ecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhh
Confidence            9999999887653   46799999999999999999999999   88999999999999999999999999987777666


Q ss_pred             ccccccccccCccccccccCCcC
Q 019842          308 KNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       308 ~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ....++.||+.|||||+-.-++-
T Consensus       167 ~KrksfiGtpywmapEvaaverk  189 (829)
T KOG0576|consen  167 AKRKSFIGTPYWMAPEVAAVERK  189 (829)
T ss_pred             hhhhcccCCccccchhHHHHHhc
Confidence            66667899999999999754443


No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.91  E-value=2.6e-24  Score=205.73  Aligned_cols=171  Identities=30%  Similarity=0.383  Sum_probs=135.0

Q ss_pred             CcccceeeecccE-EEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          153 FHESNILGEGGFG-CVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       153 ~~~~~~ig~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      |...+++|.|..| .||+|..+ ++.||||++-.   +......+|+..|+.- +|||||++++...++...|+..|.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            4556789999886 68999885 67999999852   2344567999999888 69999999999999999999999995


Q ss_pred             CCCHhHHhcCCCCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC---C--CcEEEEcccCceeCC
Q 019842          231 NRSLDIQLHGPSHG-SALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS---K--FNAKLSDFGLAITDG  304 (335)
Q Consensus       231 ~g~L~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~---~--~~~kl~Dfgla~~~~  304 (335)
                       -+|.+++...... ........+.+..|+++||++||+.   +||||||||.||||+.   +  ..++|+|||+++...
T Consensus       587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence             7999998653111 1111145678899999999999998   9999999999999976   2  569999999997764


Q ss_pred             CCCc---cccccccccCccccccccCCcCc
Q 019842          305 SQNK---NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~---~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ....   ......||.+|+|||++....-+
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~  692 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKT  692 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccC
Confidence            3322   23345799999999999876543


No 393
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.91  E-value=2.5e-23  Score=179.16  Aligned_cols=169  Identities=35%  Similarity=0.434  Sum_probs=144.5

Q ss_pred             CcccceeeecccEEEEEEEeCC-CceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecC
Q 019842          153 FHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      |...+.||+|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+++++|+|++++++++...+..++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4556789999999999998875 889999999765544 56789999999999999999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCC-cc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQN-KN  309 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~-~~  309 (335)
                      +++|.+++....  ..+++.....++.++++++.|||+.   +++|+||+++||+++.++.++|+|||.+....... ..
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~  155 (225)
T smart00221       81 GGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL  155 (225)
T ss_pred             CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence            999999986422  1288999999999999999999999   99999999999999999999999999986654332 11


Q ss_pred             ccccccccCcccccccc
Q 019842          310 NLKLSGTLGYVAPEYLL  326 (335)
Q Consensus       310 ~~~~~gt~~y~aPE~l~  326 (335)
                      .....++..|++||...
T Consensus       156 ~~~~~~~~~~~~pe~~~  172 (225)
T smart00221      156 LKTVKGTPFYLAPEVLL  172 (225)
T ss_pred             ccceeccCCcCCHhHhc
Confidence            22346788999999983


No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=6.9e-26  Score=191.82  Aligned_cols=170  Identities=30%  Similarity=0.422  Sum_probs=138.9

Q ss_pred             cccceeeecccEEEEEEEe-CCCceEEEEEecccC--chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-----eEEEE
Q 019842          154 HESNILGEGGFGCVYKAKL-DDNLHVAVKKLDCAT--QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD-----TRFIV  225 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lv  225 (335)
                      +..+-||-|+||.||-..+ ++|+.||.|++....  -...+.+.+|+.+|..++|.|++..++...-..     +.|++
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3456799999999998876 479999999986443  334578899999999999999999988766443     56788


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      +|.|. .+|...+-   ....++...+.-+..||++||+|||+.   +|.||||||.|.|++.|...||+|||+|+....
T Consensus       136 TELmQ-SDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~  208 (449)
T KOG0664|consen  136 TELMQ-SDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ  208 (449)
T ss_pred             HHHHH-hhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence            88885 67777664   345788888999999999999999999   999999999999999999999999999987554


Q ss_pred             CCc-cccccccccCccccccccCCcC
Q 019842          306 QNK-NNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       306 ~~~-~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      ... ..+.-..|-.|.|||.+++.+.
T Consensus       209 d~~~hMTqEVVTQYYRAPEiLMGaRh  234 (449)
T KOG0664|consen  209 RDRLNMTHEVVTQYYRAPELLMGARR  234 (449)
T ss_pred             hhhhhhHHHHHHHHhccHHHhhcchh
Confidence            332 2333456889999999998753


No 395
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91  E-value=7e-24  Score=178.65  Aligned_cols=139  Identities=15%  Similarity=0.185  Sum_probs=107.2

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCch--h-------H-----------------HHHHHHHHHHhcCCCCce
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD--A-------G-----------------REFENEVDLLSNIHHPNV  209 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~H~ni  209 (335)
                      ...||+|++|.||+|...+|+.||+|+++.....  .       .                 ....+|++.+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3579999999999999888999999998643211  0       1                 122459999999987776


Q ss_pred             eEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEecCCCCCCEEEcC
Q 019842          210 VCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYL-HEHCNPAVIHRDLKSSNILLDS  288 (335)
Q Consensus       210 v~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivHrdlk~~Nill~~  288 (335)
                      .....+..  ...++||||++++++.....   ....+++.....++.|++.+|.|| |+.   +++||||||+|||++ 
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-  152 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-  152 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence            33222222  22389999999887754422   234688999999999999999999 687   999999999999998 


Q ss_pred             CCcEEEEcccCceeC
Q 019842          289 KFNAKLSDFGLAITD  303 (335)
Q Consensus       289 ~~~~kl~Dfgla~~~  303 (335)
                      ++.++|+|||+|...
T Consensus       153 ~~~v~LiDFG~a~~~  167 (190)
T cd05147         153 DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCcEEEEEccccccC
Confidence            478999999999654


No 396
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.90  E-value=3.6e-23  Score=179.79  Aligned_cols=162  Identities=33%  Similarity=0.433  Sum_probs=139.2

Q ss_pred             ccEEEEEEEeCC-CceEEEEEecccCchh-HHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcC
Q 019842          163 GFGCVYKAKLDD-NLHVAVKKLDCATQDA-GREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHG  240 (335)
Q Consensus       163 ~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~  240 (335)
                      +||.||+|...+ ++.+++|++....... .+.+.+|++.+++++|+|++++++++...+..++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999998864 8899999997654444 67899999999999999999999999999999999999999999998854


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccccccCcc
Q 019842          241 PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLSGTLGYV  320 (335)
Q Consensus       241 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~  320 (335)
                      .   ..+++..++.++.++++++.|||+.   +++|+||+|+||++++++.++|+|||.+....... ......++..|+
T Consensus        81 ~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~  153 (244)
T smart00220       81 R---GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYM  153 (244)
T ss_pred             c---cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCC
Confidence            2   2389999999999999999999999   99999999999999999999999999986654432 222346788999


Q ss_pred             ccccccCCcCc
Q 019842          321 APEYLLDGMVG  331 (335)
Q Consensus       321 aPE~l~~~~~~  331 (335)
                      +||.+.++.++
T Consensus       154 ~pE~~~~~~~~  164 (244)
T smart00220      154 APEVLLGKGYG  164 (244)
T ss_pred             CHHHHccCCCC
Confidence            99998765554


No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90  E-value=1.5e-22  Score=171.54  Aligned_cols=165  Identities=39%  Similarity=0.569  Sum_probs=141.9

Q ss_pred             eeecccEEEEEEEeCC-CceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHhH
Q 019842          159 LGEGGFGCVYKAKLDD-NLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDI  236 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~~  236 (335)
                      ||+|.+|.||++...+ ++.+++|.+...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999998864 889999999755432 35679999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-CCcEEEEcccCceeCCCCCcccccccc
Q 019842          237 QLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAITDGSQNKNNLKLSG  315 (335)
Q Consensus       237 ~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~g  315 (335)
                      ++...  ...+++..++.++.+++++++|||+.   +++|+||+|.||++++ ++.++|+|||.+..............+
T Consensus        81 ~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~  155 (215)
T cd00180          81 LLKEN--EGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG  155 (215)
T ss_pred             HHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence            98632  14689999999999999999999999   9999999999999999 899999999999765443322233457


Q ss_pred             ccCccccccccCC
Q 019842          316 TLGYVAPEYLLDG  328 (335)
Q Consensus       316 t~~y~aPE~l~~~  328 (335)
                      ...|++||.+...
T Consensus       156 ~~~~~~pe~~~~~  168 (215)
T cd00180         156 TPAYMAPEVLLGK  168 (215)
T ss_pred             CCCccChhHhccc
Confidence            8899999998775


No 398
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90  E-value=9e-23  Score=172.26  Aligned_cols=140  Identities=18%  Similarity=0.146  Sum_probs=110.1

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCch--------------------------hHHHHHHHHHHHhcCCCCce
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD--------------------------AGREFENEVDLLSNIHHPNV  209 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~H~ni  209 (335)
                      ...||+|++|.||+|...+|+.||||.++.....                          ....+.+|.+.+.+++|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999888999999998643211                          01224678999999999987


Q ss_pred             eEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEcC
Q 019842          210 VCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLDS  288 (335)
Q Consensus       210 v~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~~  288 (335)
                      .....+...  ..++||||++++++.....   ....++......++.|++.++.+||+ .   +++||||||+||+++ 
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-
Confidence            444333332  2489999999886543321   12457788999999999999999999 8   999999999999999 


Q ss_pred             CCcEEEEcccCceeCC
Q 019842          289 KFNAKLSDFGLAITDG  304 (335)
Q Consensus       289 ~~~~kl~Dfgla~~~~  304 (335)
                      ++.++|+|||++....
T Consensus       153 ~~~~~liDFG~a~~~~  168 (190)
T cd05145         153 DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CCCEEEEEcccceecC
Confidence            8899999999997654


No 399
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.88  E-value=1.7e-23  Score=173.21  Aligned_cols=171  Identities=22%  Similarity=0.402  Sum_probs=141.5

Q ss_pred             hcCCcccceeeecccEEEEEEE-eCCCceEEEEEecccCchhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCC--eEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCATQDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDD--TRFIV  225 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~--~~~lv  225 (335)
                      .++|++.+.+|+|.++.||.|. ..+.+.++||.++..   ..+.+.+|+.+|..|+ ||||++|++...+..  ..-||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            4678888999999999999996 456788999998743   4567899999999997 999999999987764  67899


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcccCceeCC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDFGLAITDG  304 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Dfgla~~~~  304 (335)
                      +||+++.+....-      ..++...+...+.+++.||.|+|+.   ||.|||+||.|++||.. -.++|+|+|+|....
T Consensus       114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH  184 (338)
T KOG0668|consen  114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH  184 (338)
T ss_pred             hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence            9999988876543      3477888999999999999999999   99999999999999974 569999999997665


Q ss_pred             CCCccccccccccCccccccccCCcCccc
Q 019842          305 SQNKNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       305 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      +....+.. ..+..|--||.+.+-+.=+|
T Consensus       185 p~~eYnVR-VASRyfKGPELLVdy~~YDY  212 (338)
T KOG0668|consen  185 PGKEYNVR-VASRYFKGPELLVDYQMYDY  212 (338)
T ss_pred             CCceeeee-eehhhcCCchheeechhccc
Confidence            54444333 45677889999988665444


No 400
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88  E-value=9.2e-23  Score=190.76  Aligned_cols=170  Identities=28%  Similarity=0.341  Sum_probs=139.1

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeEEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      .++.|.....+|.|+|+.|-++... +++..+||.+...    ..+-.+|+.++... +|||++++.+.+.++...|+||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            3567777788999999999988654 6788999999654    23345677666666 7999999999999999999999


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEE-cCCCcEEEEcccCceeCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILL-DSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill-~~~~~~kl~Dfgla~~~~~  305 (335)
                      |++.++-+.+.+...   . .....+..|+.+|+.|+.|||++   +++||||||+|||+ ++.+.++|+|||.++....
T Consensus       396 e~l~g~ell~ri~~~---~-~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~  468 (612)
T KOG0603|consen  396 ELLDGGELLRRIRSK---P-EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER  468 (612)
T ss_pred             hhccccHHHHHHHhc---c-hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence            999999887776432   2 22367778999999999999999   99999999999999 6899999999999977654


Q ss_pred             CCccccccccccCccccccccCCcCcc
Q 019842          306 QNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .   ....+-|..|.|||++....|++
T Consensus       469 ~---~~tp~~t~~y~APEvl~~~~yt~  492 (612)
T KOG0603|consen  469 S---CDTPALTLQYVAPEVLAIQEYTE  492 (612)
T ss_pred             h---hcccchhhcccChhhhccCCCCc
Confidence            4   22336789999999999766653


No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.87  E-value=2.9e-22  Score=169.70  Aligned_cols=172  Identities=24%  Similarity=0.332  Sum_probs=137.0

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeE-EEeCCeEEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGY-SAHDDTRFIV  225 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lv  225 (335)
                      ..+.|.+.+.+|+|.||.+-+++++. ++.+++|-+... ....++|.+|...--.| .|.||+.-+++ ++..+.++++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            35678899999999999999998864 667888877533 34567899988765555 58999988776 6677888999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEc--CCCcEEEEcccCceeC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLD--SKFNAKLSDFGLAITD  303 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~--~~~~~kl~Dfgla~~~  303 (335)
                      +||++.|+|.+-+.    ...+.+....+++.|+++|+.|||++   ++||||||.+||||-  +...+||+|||+.+..
T Consensus       101 qE~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             eccCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccccc
Confidence            99999999987763    24578888999999999999999999   999999999999993  3567999999998765


Q ss_pred             CCCCccccccccccCccccccccCCcCc
Q 019842          304 GSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       304 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +.....   ..-+..|.+||....-+-+
T Consensus       174 g~tV~~---~~~~~~y~~pe~~~~~~ne  198 (378)
T KOG1345|consen  174 GTTVKY---LEYVNNYHAPELCDTVVNE  198 (378)
T ss_pred             Cceehh---hhhhcccCCcHHHhhcccc
Confidence            543332   2345679999987655433


No 402
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.87  E-value=1e-21  Score=173.54  Aligned_cols=176  Identities=26%  Similarity=0.311  Sum_probs=143.3

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCCC--C----ceeEEeeEEEeC
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIHH--P----NVVCLLGYSAHD  219 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~----niv~l~g~~~~~  219 (335)
                      +..+++|.+...+|+|.||.|-++... .+..||+|+++.-. ...+..+-|++++.++.+  |    -+|.+.+++.-.
T Consensus        85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr  163 (415)
T KOG0671|consen   85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR  163 (415)
T ss_pred             cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence            334788999999999999999999764 46889999986432 233456789999999942  3    278888899999


Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-----------
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-----------  288 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-----------  288 (335)
                      +..++|+|.+ +-++++++.. ++-.+++...+..|+.|++++++|||+.   +++|.||||+|||+.+           
T Consensus       164 ghiCivfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~  238 (415)
T KOG0671|consen  164 GHICIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKK  238 (415)
T ss_pred             CceEEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCC
Confidence            9999999998 4589999965 3456789999999999999999999999   9999999999999832           


Q ss_pred             ---------CCcEEEEcccCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          289 ---------KFNAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       289 ---------~~~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                               +..+||+|||.|.......   ..++.|.-|.|||++++-.++
T Consensus       239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLGwS  287 (415)
T KOG0671|consen  239 KVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLGWS  287 (415)
T ss_pred             ccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccCcC
Confidence                     2358999999997754433   345789999999999987765


No 403
>PRK10345 hypothetical protein; Provisional
Probab=99.86  E-value=5e-21  Score=163.01  Aligned_cols=136  Identities=16%  Similarity=0.226  Sum_probs=106.9

Q ss_pred             cccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcC-----CCCceeEEeeEEEeCC---e-EEE
Q 019842          154 HESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNI-----HHPNVVCLLGYSAHDD---T-RFI  224 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~l  224 (335)
                      ...+.||+|+||.||. .-+++.. +||++........+++.+|+.+++.+     +||||++++|+++++.   . ..+
T Consensus         5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            4467899999999996 3234444 68988665444567899999999999     5799999999999874   3 347


Q ss_pred             EEEe--cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEecCCCCCCEEEcC----CCcEEEEc-
Q 019842          225 VYEL--MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGL-EYLHEHCNPAVIHRDLKSSNILLDS----KFNAKLSD-  296 (335)
Q Consensus       225 v~E~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~ivHrdlk~~Nill~~----~~~~kl~D-  296 (335)
                      |+||  +.+|+|.+++..    ..+++.  ..++.+++.++ +|||++   +|+||||||+|||++.    +..++|+| 
T Consensus        83 I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            8999  557999999953    235555  35678888888 999999   9999999999999974    34799999 


Q ss_pred             ccCc
Q 019842          297 FGLA  300 (335)
Q Consensus       297 fgla  300 (335)
                      ||..
T Consensus       154 ~G~~  157 (210)
T PRK10345        154 IGES  157 (210)
T ss_pred             CCCc
Confidence            4543


No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.86  E-value=2.8e-22  Score=173.29  Aligned_cols=169  Identities=29%  Similarity=0.346  Sum_probs=136.7

Q ss_pred             CCcccceeeecccEEEEEEEeC-CCceEEEEEeccc--CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCC------eE
Q 019842          152 SFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA--TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDD------TR  222 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~  222 (335)
                      +|.....+|.|.- .|.-|-+. .++.||+|++...  .....++..+|...+..++|+||++++.++.-..      +.
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            5555667777776 45544332 4788999988433  3445567889999999999999999999987543      56


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      |+|||||. .+|...++     ..++-.....|..|++.|++|||+.   +|+||||||+||++..+..+||.|||+|+.
T Consensus        97 y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~  167 (369)
T KOG0665|consen   97 YLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLART  167 (369)
T ss_pred             HHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcc
Confidence            99999996 67776664     3467778889999999999999999   999999999999999999999999999987


Q ss_pred             CCCCCccccccccccCccccccccCCcCc
Q 019842          303 DGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       303 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      .+.. ...+....|..|.|||++.+-.+.
T Consensus       168 e~~~-~~mtpyVvtRyyrapevil~~~~k  195 (369)
T KOG0665|consen  168 EDTD-FMMTPYVVTRYYRAPEVILGMGYK  195 (369)
T ss_pred             cCcc-cccCchhheeeccCchheeccCCc
Confidence            6554 455567789999999999887654


No 405
>smart00090 RIO RIO-like kinase.
Probab=99.84  E-value=3e-20  Score=161.77  Aligned_cols=142  Identities=17%  Similarity=0.132  Sum_probs=110.9

Q ss_pred             CCcccceeeecccEEEEEEE--eCCCceEEEEEecccCch------------------------hHHHHHHHHHHHhcCC
Q 019842          152 SFHESNILGEGGFGCVYKAK--LDDNLHVAVKKLDCATQD------------------------AGREFENEVDLLSNIH  205 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~  205 (335)
                      .|.+.+.||+|++|.||+|.  ..+|+.||+|.+......                        ....+.+|++.+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999998  568999999998643210                        1123678999999997


Q ss_pred             CC--ceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEecCCCCC
Q 019842          206 HP--NVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPA-VIHRDLKSS  282 (335)
Q Consensus       206 H~--niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivHrdlk~~  282 (335)
                      +.  .+.+.+++    ...++||||+++++|.....   ....+.......++.|++.++++||+.   + ++||||||+
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~  178 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEY  178 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChh
Confidence            53  34444443    23489999999988865442   123456666789999999999999999   8 999999999


Q ss_pred             CEEEcCCCcEEEEcccCceeCC
Q 019842          283 NILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       283 Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ||+++ +++++|+|||++...+
T Consensus       179 NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      179 NILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             hEEEE-CCCEEEEEChhhhccC
Confidence            99999 8899999999986543


No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83  E-value=5.7e-20  Score=167.86  Aligned_cols=176  Identities=26%  Similarity=0.344  Sum_probs=138.9

Q ss_pred             CCcccceeeecccEEEEEEEeCCC--ceEEEEEecccCchhHHHHHHHHHHHhcCCC----CceeEEeeEE-EeCCeEEE
Q 019842          152 SFHESNILGEGGFGCVYKAKLDDN--LHVAVKKLDCATQDAGREFENEVDLLSNIHH----PNVVCLLGYS-AHDDTRFI  224 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l  224 (335)
                      +|...+.||+|+||.||.+...+.  ..+|+|.-..........+..|..++..+..    +++..+++.. ...+..|+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            788999999999999999987653  4677777654433322367888998888863    5888998888 57778999


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-----CcEEEEcccC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-----FNAKLSDFGL  299 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-----~~~kl~Dfgl  299 (335)
                      ||+.+ +.+|.+...... ...++..+.++|+.|++.+|++||+.   +++||||||.|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99987 578888764323 57799999999999999999999999   99999999999999865     4699999999


Q ss_pred             ce--eCC-CCC-----c-c-ccccccccCccccccccCCcCcc
Q 019842          300 AI--TDG-SQN-----K-N-NLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       300 a~--~~~-~~~-----~-~-~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      ++  ... ...     . . ...+.||.+|++++...+...++
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r  216 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGR  216 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCC
Confidence            97  321 111     1 1 22356999999999888877765


No 407
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83  E-value=9.7e-20  Score=152.80  Aligned_cols=132  Identities=21%  Similarity=0.213  Sum_probs=106.2

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEecccCch----hHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEEEec
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD----AGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      ....|++|+||+||.+.. ++.+++.+.+.....-    ....+.+|+++|++|+ |+++.+++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            467899999999997766 6778888877654331    1235889999999995 5889999886    4569999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCC-CCCCEEEcCCCcEEEEcccCceeCC
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDL-KSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdl-k~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      .+.+|...+.   .       ....++.|++++|+++|++   +|+|||| ||+|||+++++.++|+|||+|....
T Consensus        81 ~G~~L~~~~~---~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         81 AGAAMYQRPP---R-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             cCccHHhhhh---h-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            9988864431   0       1135778999999999999   9999999 7999999999999999999997544


No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.83  E-value=8e-21  Score=173.51  Aligned_cols=184  Identities=21%  Similarity=0.235  Sum_probs=150.8

Q ss_pred             ccHHHHHHHhcCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCC------CCceeEEe
Q 019842          141 IEYKLLEKATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIH------HPNVVCLL  213 (335)
Q Consensus       141 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~  213 (335)
                      +....-|....+|.+....|+|-|++|.+|... .|+.||||++... +.-.+.=++|+++|++|+      --|+++|+
T Consensus       422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~  500 (752)
T KOG0670|consen  422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLF  500 (752)
T ss_pred             EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence            444555677788999999999999999999865 4789999999643 333445578999999996      24899999


Q ss_pred             eEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcE
Q 019842          214 GYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNA  292 (335)
Q Consensus       214 g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~  292 (335)
                      ..|...+++|||+|-+. -+|.+.|..-..+..|....+..++.|+.-||..|-..   +|+|.||||.|||+++. ..+
T Consensus       501 r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iL  576 (752)
T KOG0670|consen  501 RHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNIL  576 (752)
T ss_pred             HHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCccee
Confidence            99999999999999874 68888887655556688899999999999999999987   99999999999999985 568


Q ss_pred             EEEcccCceeCCCCCccccccccccCccccccccCCcCc
Q 019842          293 KLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       293 kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      ||||||.|........  +....+..|.|||.+.+-+|.
T Consensus       577 KLCDfGSA~~~~enei--tPYLVSRFYRaPEIiLG~~yd  613 (752)
T KOG0670|consen  577 KLCDFGSASFASENEI--TPYLVSRFYRAPEIILGLPYD  613 (752)
T ss_pred             eeccCccccccccccc--cHHHHHHhccCcceeecCccc
Confidence            9999999866544332  233456789999999998875


No 409
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83  E-value=6.1e-20  Score=157.06  Aligned_cols=140  Identities=13%  Similarity=0.137  Sum_probs=114.5

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHH---H------HHHHHHHHhcCCCCceeEEeeEEEe
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGR---E------FENEVDLLSNIHHPNVVCLLGYSAH  218 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~H~niv~l~g~~~~  218 (335)
                      ...++|...+++|.|+||.||.+.. ++..+|+|.+.........   .      +.+|+..+.+++|++|.....++..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            4578999999999999999999766 5668999999654332222   2      6899999999999999999888654


Q ss_pred             C--------CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC
Q 019842          219 D--------DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF  290 (335)
Q Consensus       219 ~--------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~  290 (335)
                      .        +..+++|||++|.+|.+...       ++.    ....+++.+|..||+.   +++|||++|+|+++++++
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g  172 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence            3        35789999999999977631       222    3456999999999999   999999999999999988


Q ss_pred             cEEEEcccCceeC
Q 019842          291 NAKLSDFGLAITD  303 (335)
Q Consensus       291 ~~kl~Dfgla~~~  303 (335)
                       ++|+|||.....
T Consensus       173 -i~liDfg~~~~~  184 (232)
T PRK10359        173 -LRIIDLSGKRCT  184 (232)
T ss_pred             -EEEEECCCcccc
Confidence             999999987554


No 410
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.82  E-value=1e-19  Score=156.13  Aligned_cols=135  Identities=21%  Similarity=0.256  Sum_probs=112.9

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCc--------hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQ--------DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      +.||+|++|.||+|.. ++..|++|+......        .....+.+|++++..++|+|+.....++.+.+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 566789997643221        1124578899999999999988777777777888999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +++++|.+.+...      .+ .+..++.+++.+|.+||+.   +++|||++|.|||++ ++.++|+|||++...
T Consensus        81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879         81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            9999999887531      12 7889999999999999999   999999999999999 789999999998653


No 411
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.82  E-value=1.8e-19  Score=153.23  Aligned_cols=143  Identities=19%  Similarity=0.115  Sum_probs=110.7

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCch----------------------hHHHHHHHHHHHhcC
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD----------------------AGREFENEVDLLSNI  204 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l  204 (335)
                      ......|...+.||+|+||.||++...+|+.||||++......                      ....+.+|...+..+
T Consensus        11 ~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   90 (198)
T cd05144          11 VKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL   90 (198)
T ss_pred             HHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence            3333347778999999999999999888999999987532210                      112367789999999


Q ss_pred             CCCc--eeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCC
Q 019842          205 HHPN--VVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSS  282 (335)
Q Consensus       205 ~H~n--iv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~  282 (335)
                      .|++  +...++    ....++||||+++++|......         .....++.+++.++.++|+.   +++||||+|+
T Consensus        91 ~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~  154 (198)
T cd05144          91 YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEF  154 (198)
T ss_pred             HHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcc
Confidence            8774  444443    2455899999999998654320         23567889999999999998   9999999999


Q ss_pred             CEEEcCCCcEEEEcccCceeCCC
Q 019842          283 NILLDSKFNAKLSDFGLAITDGS  305 (335)
Q Consensus       283 Nill~~~~~~kl~Dfgla~~~~~  305 (335)
                      ||+++++++++|+|||++.....
T Consensus       155 Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         155 NILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             cEEEcCCCcEEEEECCccccCCC
Confidence            99999999999999999955443


No 412
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.82  E-value=1.6e-19  Score=175.67  Aligned_cols=138  Identities=20%  Similarity=0.248  Sum_probs=112.7

Q ss_pred             cCCcccceeeecccEEEEEEEeCCCceEEEEE-eccc-C------chhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLDDNLHVAVKK-LDCA-T------QDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~-~~~~-~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~  222 (335)
                      ..|...+.||+|+||.||+|.+.+.. +++|+ .... .      .....++.+|++++.+++|+|++....++.+.+..
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            44556789999999999999876554 33333 2211 1      11235688999999999999999888888887788


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ++||||+++++|.+++.           ....++.+++++|.|||+.   +++||||||+|||+ +++.++|+|||+++.
T Consensus       412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            99999999999998873           3568999999999999999   99999999999999 678999999999976


Q ss_pred             CC
Q 019842          303 DG  304 (335)
Q Consensus       303 ~~  304 (335)
                      ..
T Consensus       477 ~~  478 (535)
T PRK09605        477 SD  478 (535)
T ss_pred             CC
Confidence            43


No 413
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.80  E-value=3e-19  Score=151.83  Aligned_cols=131  Identities=24%  Similarity=0.329  Sum_probs=105.7

Q ss_pred             eeeecccEEEEEEEeCCCceEEEEEecccC---c-----hhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          158 ILGEGGFGCVYKAKLDDNLHVAVKKLDCAT---Q-----DAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~---~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .||+|++|.||+|.. ++..|++|......   .     ....++.+|++++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999985 56789999864321   1     11356788999999999887655555555666779999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      ++++|.+.+...   .       ..++.+++.+|.+||+.   +++|||++|+||+++ ++.++++|||++...
T Consensus        80 ~g~~l~~~~~~~---~-------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        80 EGKPLKDVIEEG---N-------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CCccHHHHHhhc---H-------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            999998877421   1       08899999999999999   999999999999999 889999999998654


No 414
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.80  E-value=9.3e-20  Score=163.03  Aligned_cols=144  Identities=27%  Similarity=0.378  Sum_probs=125.1

Q ss_pred             HHHhcCCcccceeeecccEEEEEEEeC----CCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCe
Q 019842          147 EKATDSFHESNILGEGGFGCVYKAKLD----DNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDT  221 (335)
Q Consensus       147 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~  221 (335)
                      ....+.|...+.||+|.|++||+|.+.    ..+.||+|.+...+  .-.++.+|++.|..+ -+.||+++.+++...+.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            344567888999999999999999653    46789999986543  335689999999999 59999999999999999


Q ss_pred             EEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcccCc
Q 019842          222 RFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDFGLA  300 (335)
Q Consensus       222 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Dfgla  300 (335)
                      ..+|+||++.....++..      .++...+..++..+..||+++|.+   +||||||||+|+|.+.. +.-.|.|||+|
T Consensus       110 v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA  180 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLA  180 (418)
T ss_pred             eEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhH
Confidence            999999999998888874      366788899999999999999999   99999999999999864 66899999998


Q ss_pred             e
Q 019842          301 I  301 (335)
Q Consensus       301 ~  301 (335)
                      .
T Consensus       181 ~  181 (418)
T KOG1167|consen  181 Q  181 (418)
T ss_pred             H
Confidence            4


No 415
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.80  E-value=1.7e-18  Score=156.12  Aligned_cols=171  Identities=35%  Similarity=0.475  Sum_probs=142.1

Q ss_pred             CcccceeeecccEEEEEEEeCCCceEEEEEecccCch---hHHHHHHHHHHHhcCCCC-ceeEEeeEEEeCCeEEEEEEe
Q 019842          153 FHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD---AGREFENEVDLLSNIHHP-NVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E~  228 (335)
                      |...+.||.|+||.||++...  ..+++|.+......   ....+.+|+.+++.+.|+ +++++.+++...+..++++||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            556778999999999999887  78899988654322   467899999999999988 799999999877788999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC-cEEEEcccCceeCCCCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF-NAKLSDFGLAITDGSQN  307 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfgla~~~~~~~  307 (335)
                      +.++++.+.+........+.......+..|++.+++|+|+.   +++|||+||+||+++.+. .++++|||.++......
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            99999996664321113689999999999999999999999   999999999999999998 79999999987544332


Q ss_pred             c------cccccccccCccccccccCC
Q 019842          308 K------NNLKLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       308 ~------~~~~~~gt~~y~aPE~l~~~  328 (335)
                      .      ......|+..|+|||.+.+.
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~  183 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGL  183 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCC
Confidence            1      22455799999999999873


No 416
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.77  E-value=1.7e-18  Score=144.72  Aligned_cols=170  Identities=22%  Similarity=0.319  Sum_probs=132.7

Q ss_pred             hcCCcccceeeecccEEEEEEE-eCCCceEEEEEecccCchhHHHHHHHHHHHhcCCC-CceeEEeeEEEeCCeEEEEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHH-PNVVCLLGYSAHDDTRFIVYE  227 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~E  227 (335)
                      ...|...+.||.|+||.+|.|. ..+|..||+|.=...  .....+.-|..+...|++ ..|..+..+..+.+.-.+|||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            4578889999999999999996 568999999985432  223456778888888875 678888888888889999999


Q ss_pred             ecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC---CCcEEEEcccCceeCC
Q 019842          228 LMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS---KFNAKLSDFGLAITDG  304 (335)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~---~~~~kl~Dfgla~~~~  304 (335)
                      .+ +-+|.+.+.-  -...++..+.+-.+-|++.-++|+|.+   +++||||||+|+|..-   -..+.++|||+|+..-
T Consensus        92 LL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen   92 LL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             cc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhc
Confidence            98 4677776642  234588999999999999999999999   9999999999999864   3569999999996432


Q ss_pred             CCC-------ccccccccccCccccccccC
Q 019842          305 SQN-------KNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       305 ~~~-------~~~~~~~gt~~y~aPE~l~~  327 (335)
                      +..       .......||.+|.+-....+
T Consensus       166 d~~t~~HIpyre~r~ltGTaRYASinAh~g  195 (341)
T KOG1163|consen  166 DIRTRQHIPYREDRNLTGTARYASINAHLG  195 (341)
T ss_pred             cccccccCccccCCccceeeeehhhhhhhh
Confidence            211       12234568999987655443


No 417
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.77  E-value=3.2e-18  Score=149.08  Aligned_cols=172  Identities=23%  Similarity=0.335  Sum_probs=135.2

Q ss_pred             CCcccceeeecccEEEEEEE-eCCCceEEEEEecccCchhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEEEec
Q 019842          152 SFHESNILGEGGFGCVYKAK-LDDNLHVAVKKLDCATQDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .|.+.+.||+|.||.++.|+ +-+++.||||.=..  +...-+++.|....+.|. .++|...+-+..++..-.||+|++
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            67889999999999999996 45789999996432  334456777888887774 688988888877777888999998


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-----CCcEEEEcccCceeCC
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-----KFNAKLSDFGLAITDG  304 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-----~~~~kl~Dfgla~~~~  304 (335)
                       +-+|.+...  --+..++.+++.-+|.|++.-++|+|++   .+|.|||||+|+||..     ...+.++|||+|+...
T Consensus       107 -GPSLEDLFD--~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  107 -GPSLEDLFD--LCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             -CcCHHHHHH--HhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence             457766553  2345699999999999999999999999   9999999999999964     3459999999997643


Q ss_pred             CCCc-------cccccccccCccccccccCCcCc
Q 019842          305 SQNK-------NNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 ~~~~-------~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      +...       ...+..||.+||+=.--.+.+-+
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQS  214 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQS  214 (449)
T ss_pred             CccccccCccccccccccceeeeEeeccccchhh
Confidence            3221       22356799999997666665544


No 418
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.76  E-value=4.6e-18  Score=137.05  Aligned_cols=135  Identities=24%  Similarity=0.225  Sum_probs=114.4

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCC--CceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHH--PNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      .+.||+|.++.||++..++ ..+++|.......  ...+.+|+..+..++|  .++.+++++....+..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            5679999999999999865 6789998864433  4678899999999976  589999999888889999999999877


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      +...          +......++.+++++|++||.....+++|+|++|+||++++++.++++|||.+...
T Consensus        80 ~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          80 LDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             cccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence            7432          55677889999999999999864457999999999999999999999999998653


No 419
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75  E-value=2.1e-18  Score=171.97  Aligned_cols=179  Identities=21%  Similarity=0.224  Sum_probs=139.5

Q ss_pred             HHHHHHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCC---CCceeEEeeEEEeCC
Q 019842          144 KLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIH---HPNVVCLLGYSAHDD  220 (335)
Q Consensus       144 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~  220 (335)
                      .+.+...+.|.+.+.||+|+||+||+|...+|+.||+|.-+....   .+|.--.+++.+|+   -+-|+.+..++.-.+
T Consensus       691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~  767 (974)
T KOG1166|consen  691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQN  767 (974)
T ss_pred             ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence            334555677888999999999999999988899999998764432   22222233444444   244555666666778


Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-------CCcEE
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-------KFNAK  293 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-------~~~~k  293 (335)
                      ..+||+||.+.|+|.+++.   ....++|...+.+..|+++-++.||..   +|||+||||+|+||..       +..++
T Consensus       768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence            8899999999999999985   556799999999999999999999999   9999999999999943       45699


Q ss_pred             EEcccCceeCC--CCCccccccccccCccccccccCCcCc
Q 019842          294 LSDFGLAITDG--SQNKNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       294 l~Dfgla~~~~--~~~~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                      |+|||.+....  .........++|..+-.+|+..+.+++
T Consensus       842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWt  881 (974)
T KOG1166|consen  842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWT  881 (974)
T ss_pred             EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCc
Confidence            99999985542  222333456789999999999988875


No 420
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.74  E-value=1.4e-17  Score=140.14  Aligned_cols=136  Identities=21%  Similarity=0.198  Sum_probs=97.7

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCch--hHHH----------------------HHHHHHHHhcCCCCc--e
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD--AGRE----------------------FENEVDLLSNIHHPN--V  209 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~H~n--i  209 (335)
                      .+.||+|+||+||+|...+++.||||.+......  ....                      ...|.+.+.++++..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999888999999988643211  1111                      135566666664432  3


Q ss_pred             eEEeeEEEeCCeEEEEEEecCCCCHhHH-hcCCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecCCCCCCEEEc
Q 019842          210 VCLLGYSAHDDTRFIVYELMENRSLDIQ-LHGPSHGSALTWHMRMKIALDTARGLEYLHE-HCNPAVIHRDLKSSNILLD  287 (335)
Q Consensus       210 v~l~g~~~~~~~~~lv~E~~~~g~L~~~-l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~ivHrdlk~~Nill~  287 (335)
                      .+.+++    ...++||||++++.+... +....    .. .....++.+++.++.++|. .   +++||||||+||+++
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence            444433    245899999998654221 11100    11 5678899999999999999 7   999999999999999


Q ss_pred             CCCcEEEEcccCceeCC
Q 019842          288 SKFNAKLSDFGLAITDG  304 (335)
Q Consensus       288 ~~~~~kl~Dfgla~~~~  304 (335)
                       ++.++|+|||.+....
T Consensus       150 -~~~~~liDfg~a~~~~  165 (187)
T cd05119         150 -DGKVYIIDVPQAVEID  165 (187)
T ss_pred             -CCcEEEEECccccccc
Confidence             8999999999996543


No 421
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.73  E-value=1.6e-17  Score=151.13  Aligned_cols=134  Identities=31%  Similarity=0.411  Sum_probs=110.5

Q ss_pred             cCCcccceeeecccEEEEEEEeC-CCceEEEEEecccCchhHHHHHHHHHHHhcCC-----C---CceeEEeeEEEeC--
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCATQDAGREFENEVDLLSNIH-----H---PNVVCLLGYSAHD--  219 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~~~--  219 (335)
                      .+|...++||=|.|++||++... +.+.||+|+.+.+ +.-.+..+.||.+|++++     |   ..||+|++.|...  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            68889999999999999999764 5678999998743 334556789999999984     3   4699999999865  


Q ss_pred             --CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC
Q 019842          220 --DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK  289 (335)
Q Consensus       220 --~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~  289 (335)
                        .+.+||+|++. .+|..++.. ..-..++...+..|+.||+.||.|||..|  +|||.||||+|||+..+
T Consensus       157 NG~HVCMVfEvLG-dnLLklI~~-s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  157 NGQHVCMVFEVLG-DNLLKLIKY-SNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcEEEEEehhhh-hHHHHHHHH-hCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence              47899999994 566666654 23355889999999999999999999998  99999999999999654


No 422
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.72  E-value=1.2e-16  Score=139.51  Aligned_cols=137  Identities=19%  Similarity=0.193  Sum_probs=106.2

Q ss_pred             cceee-ecccEEEEEEEeCCCceEEEEEecccC-------------chhHHHHHHHHHHHhcCCCCce--eEEeeEEEeC
Q 019842          156 SNILG-EGGFGCVYKAKLDDNLHVAVKKLDCAT-------------QDAGREFENEVDLLSNIHHPNV--VCLLGYSAHD  219 (335)
Q Consensus       156 ~~~ig-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~  219 (335)
                      ..+|| .||.|+||++... +..+++|.+....             ......+.+|++++.+++|+++  +..+++....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            45788 8999999999885 5678888774311             1223568899999999998875  6777765443


Q ss_pred             C----eEEEEEEecCC-CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          220 D----TRFIVYELMEN-RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       220 ~----~~~lv~E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                      .    ..++|+||+++ .+|.+++..    ..++..    .+.+++.+|.+||+.   +|+||||||.|||++.++.++|
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L  183 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL  183 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence            2    23599999997 689888743    234443    357899999999999   9999999999999999999999


Q ss_pred             EcccCceeCC
Q 019842          295 SDFGLAITDG  304 (335)
Q Consensus       295 ~Dfgla~~~~  304 (335)
                      +|||.+....
T Consensus       184 IDfg~~~~~~  193 (239)
T PRK01723        184 IDFDRGELRT  193 (239)
T ss_pred             EECCCcccCC
Confidence            9999986543


No 423
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.72  E-value=4.3e-18  Score=173.28  Aligned_cols=123  Identities=16%  Similarity=0.182  Sum_probs=91.0

Q ss_pred             cCCC-CceeEEeeEE-------EeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 019842          203 NIHH-PNVVCLLGYS-------AHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAV  274 (335)
Q Consensus       203 ~l~H-~niv~l~g~~-------~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i  274 (335)
                      .++| .||.++++++       .+.+..+.++||+ +++|.+++...  ...+++.+++.++.||++||+|||++   +|
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---gI  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQ---GI  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            4556 5888888877       3334677888987 56999999642  35699999999999999999999999   99


Q ss_pred             EecCCCCCCEEEcC-------------------CCcEEEEcccCceeCCCCC----------------ccccccccccCc
Q 019842          275 IHRDLKSSNILLDS-------------------KFNAKLSDFGLAITDGSQN----------------KNNLKLSGTLGY  319 (335)
Q Consensus       275 vHrdlk~~Nill~~-------------------~~~~kl~Dfgla~~~~~~~----------------~~~~~~~gt~~y  319 (335)
                      +||||||+||||+.                   ++.+|++|||+++......                .......||+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            99999999999965                   4456666666664321100                000113578889


Q ss_pred             cccccccCCcCc
Q 019842          320 VAPEYLLDGMVG  331 (335)
Q Consensus       320 ~aPE~l~~~~~~  331 (335)
                      ||||++.+..++
T Consensus       182 ~APE~~~~~~~~  193 (793)
T PLN00181        182 TSPEEDNGSSSN  193 (793)
T ss_pred             EChhhhccCCCC
Confidence            999999988775


No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68  E-value=3.4e-17  Score=159.59  Aligned_cols=173  Identities=25%  Similarity=0.266  Sum_probs=132.8

Q ss_pred             cccceeeecccEEEEEEEeC-CCceEEEEEec----c-cCchh-HHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          154 HESNILGEGGFGCVYKAKLD-DNLHVAVKKLD----C-ATQDA-GREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~----~-~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ....++|.|.+|.|+..... .....+.|...    . ..... ...+..|..+-..++|+|++..+..+.+....+-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            35678999999977766432 23333333321    1 11111 122667888888999999998888888877777779


Q ss_pred             EecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC
Q 019842          227 ELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ  306 (335)
Q Consensus       227 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~  306 (335)
                      ||+++ +|...+..   ...++..++..++.|+..|++|||+.   ++.|||+|++|++++.++.+||+|||.+......
T Consensus       401 E~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             hcccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            99999 99988843   34688889999999999999999999   9999999999999999999999999998443221


Q ss_pred             C----ccccccccccCccccccccCCcCccc
Q 019842          307 N----KNNLKLSGTLGYVAPEYLLDGMVGKF  333 (335)
Q Consensus       307 ~----~~~~~~~gt~~y~aPE~l~~~~~~~~  333 (335)
                      .    .....++|+..|+|||.+.+..|...
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr  504 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPR  504 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccccccCcc
Confidence            1    33445689999999999999988764


No 425
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.62  E-value=4.3e-15  Score=140.48  Aligned_cols=141  Identities=21%  Similarity=0.184  Sum_probs=99.9

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchh----------------------------------------HHHHH
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA----------------------------------------GREFE  195 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~  195 (335)
                      .+.||.|++|.||+|++.+|+.||||+.+......                                        .-+|.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            46799999999999999999999999985432110                                        01245


Q ss_pred             HHHHHHhcC----CCCceeEEeeEEE-eCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHH-HHHHHhhC
Q 019842          196 NEVDLLSNI----HHPNVVCLLGYSA-HDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTAR-GLEYLHEH  269 (335)
Q Consensus       196 ~E~~~l~~l----~H~niv~l~g~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~-~L~yLH~~  269 (335)
                      +|+..+.++    +|.+-+.+-.++. .....+|||||+++++|.+.......  ..   .+..++.++++ .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhC
Confidence            565555554    2333334333332 23457999999999999876532111  11   23456666666 46788888


Q ss_pred             CCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          270 CNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       270 ~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                         +++|+|++|.||++++++.++++|||++....
T Consensus       277 ---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 ---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence               99999999999999999999999999986654


No 426
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.61  E-value=1.9e-16  Score=134.77  Aligned_cols=165  Identities=24%  Similarity=0.385  Sum_probs=129.7

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecc--cCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDC--ATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      ..+|.+...|..|+|+++++ .+++|.+..  .+....++|..|.-.|+-+.||||+.++|.|.....+.++..||+.|+
T Consensus       195 ~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            34578889999999999755 455566543  334455789999999999999999999999999999999999999999


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEE--cccCceeCCCCCcccc
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLS--DFGLAITDGSQNKNNL  311 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~--Dfgla~~~~~~~~~~~  311 (335)
                      |+..|+.. .+-..+..++.+++.++|+||+|||+. .+-|----|.+..+++|++.+++|+  |--++-+       ..
T Consensus       274 lynvlhe~-t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfq-------e~  344 (448)
T KOG0195|consen  274 LYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-------EV  344 (448)
T ss_pred             HHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeee-------cc
Confidence            99999874 345578889999999999999999997 3334444799999999999998875  3222211       11


Q ss_pred             ccccccCccccccccCCcC
Q 019842          312 KLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~  330 (335)
                      ...-.+.||+||.+...+-
T Consensus       345 gr~y~pawmspealqrkpe  363 (448)
T KOG0195|consen  345 GRAYSPAWMSPEALQRKPE  363 (448)
T ss_pred             ccccCcccCCHHHHhcCch
Confidence            1234789999999987654


No 427
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.55  E-value=7.2e-16  Score=144.85  Aligned_cols=159  Identities=26%  Similarity=0.321  Sum_probs=129.7

Q ss_pred             eeeecccEEEEEEE----eCCCceEEEEEecccCc--hhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEEEecC
Q 019842          158 ILGEGGFGCVYKAK----LDDNLHVAVKKLDCATQ--DAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVYELME  230 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~----~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~~  230 (335)
                      ++|+|.||.|+..+    .+.+..+|.|.+...+.  ........|..++...+ ||.++++.-.++.+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            37899999999763    34567778887754321  11125567888898997 9999999999999999999999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccc
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNN  310 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  310 (335)
                      +|.|...+.   .....++.....+...++-+++++|+.   +++|||+|++||+++.+|.+++.|||+++........ 
T Consensus        81 gg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-  153 (612)
T KOG0603|consen   81 GGDLFTRLS---KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-  153 (612)
T ss_pred             cchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence            999988774   334566777777888899999999999   9999999999999999999999999999775443332 


Q ss_pred             cccccccCcccccccc
Q 019842          311 LKLSGTLGYVAPEYLL  326 (335)
Q Consensus       311 ~~~~gt~~y~aPE~l~  326 (335)
                         +||..|||||++.
T Consensus       154 ---cgt~eymApEI~~  166 (612)
T KOG0603|consen  154 ---CGTYEYRAPEIIN  166 (612)
T ss_pred             ---ccchhhhhhHhhh
Confidence               8999999999998


No 428
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.50  E-value=2.8e-15  Score=148.06  Aligned_cols=169  Identities=24%  Similarity=0.262  Sum_probs=128.9

Q ss_pred             CCcccceeeecccEEEEEEEeCCCceEEEEEecccC-chhHHHHHHHHHH--HhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          152 SFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCAT-QDAGREFENEVDL--LSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      ++...+.+|.+.|=+|.+|+.++|. |+||++-... .-..+.|.++++-  ...++|||.+.+.-+-..+...|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5667889999999999999999886 8889884433 3334444444433  4556899999998887777788999999


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeC--CCC
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD--GSQ  306 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~--~~~  306 (335)
                      +. .+|++.+.   ....+...+..-|+.|++.||.-+|..   +|+|||||.+||||+..+-+.|+||..-+..  ..+
T Consensus       103 vk-hnLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen  103 VK-HNLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             Hh-hhhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence            85 68888884   445678888889999999999999999   9999999999999999999999999754321  111


Q ss_pred             Cc-ccc----ccccccCccccccccCC
Q 019842          307 NK-NNL----KLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       307 ~~-~~~----~~~gt~~y~aPE~l~~~  328 (335)
                      +. ...    +-..-.+|.|||.+..+
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv~~  202 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFVSA  202 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhhcc
Confidence            11 101    11234579999998764


No 429
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.49  E-value=4.1e-14  Score=135.63  Aligned_cols=145  Identities=17%  Similarity=0.122  Sum_probs=94.0

Q ss_pred             HhcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCch----------------------------------hHH-
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQD----------------------------------AGR-  192 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~-  192 (335)
                      .-.+|+. +-||.|++|.||+|++.+ |+.||||+.+..-..                                  ..+ 
T Consensus       118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~  196 (537)
T PRK04750        118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT  196 (537)
T ss_pred             HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence            3445665 789999999999999987 999999998643110                                  011 


Q ss_pred             -----HHHHHHHHHhcCC----CCceeEEeeEEEe-CCeEEEEEEecCCCCHhHHhcCCCCCC---CCCHHHHHHHHHHH
Q 019842          193 -----EFENEVDLLSNIH----HPNVVCLLGYSAH-DDTRFIVYELMENRSLDIQLHGPSHGS---ALTWHMRMKIALDT  259 (335)
Q Consensus       193 -----~~~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~---~l~~~~~~~i~~~i  259 (335)
                           ++.+|+.-+.+++    +.+.+.+-.++.+ ....+|||||++|+.+.+.-.-...+.   .+.......++.|+
T Consensus       197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                 2344544444442    3444444344433 346789999999999976421111111   12222233333333


Q ss_pred             HHHHHHHhhCCCCCeEecCCCCCCEEEcCCC----cEEEEcccCceeCC
Q 019842          260 ARGLEYLHEHCNPAVIHRDLKSSNILLDSKF----NAKLSDFGLAITDG  304 (335)
Q Consensus       260 a~~L~yLH~~~~~~ivHrdlk~~Nill~~~~----~~kl~Dfgla~~~~  304 (335)
                             ...   +++|+|++|.||+++.++    .+++.|||++....
T Consensus       277 -------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        277 -------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             -------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence                   344   999999999999999988    99999999986554


No 430
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.47  E-value=1.9e-13  Score=112.88  Aligned_cols=131  Identities=21%  Similarity=0.151  Sum_probs=95.8

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCcee-EEeeEEEeCCeEEEEEEecCCCCH
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVV-CLLGYSAHDDTRFIVYELMENRSL  234 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E~~~~g~L  234 (335)
                      .+.++.|.++.||+++.. +..+++|....... ....+.+|+..+..+.+.+++ +++++..  +..++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence            356788999999999875 66899998754322 233567899999988655543 4554433  345899999999887


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHC--NPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ....        .   ....++.+++++|+.||+..  ...++|+|++|.||+++ ++.++++|||.+..
T Consensus        79 ~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          79 LTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            5320        1   11345678999999999972  12369999999999999 66899999999854


No 431
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.42  E-value=5.3e-12  Score=105.89  Aligned_cols=136  Identities=14%  Similarity=0.166  Sum_probs=98.3

Q ss_pred             ceeeecccEEEEEEEeCC-------CceEEEEEecccC----------------------chhHHHH----HHHHHHHhc
Q 019842          157 NILGEGGFGCVYKAKLDD-------NLHVAVKKLDCAT----------------------QDAGREF----ENEVDLLSN  203 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~----------------------~~~~~~~----~~E~~~l~~  203 (335)
                      ..||.|.-+.||.|...+       +..+|||..+...                      .+..+.+    ++|...|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997553       4789999763210                      0112223    389999998


Q ss_pred             CCC--CceeEEeeEEEeCCeEEEEEEecCCCCHhH-HhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEecCC
Q 019842          204 IHH--PNVVCLLGYSAHDDTRFIVYELMENRSLDI-QLHGPSHGSALTWHMRMKIALDTARGLEYL-HEHCNPAVIHRDL  279 (335)
Q Consensus       204 l~H--~niv~l~g~~~~~~~~~lv~E~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivHrdl  279 (335)
                      +..  -++.+.+++    ..-++||||+.++.+.. .+.    ...++......+..+++.+|..| |..   +++||||
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL  151 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL  151 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            853  456666654    45689999998654422 221    12345556678889999999999 787   9999999


Q ss_pred             CCCCEEEcCCCcEEEEcccCceeCC
Q 019842          280 KSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       280 k~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ++.||+++ ++.++|+|||.+....
T Consensus       152 s~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         152 SEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             CHHHEEEE-CCcEEEEECCCceeCC
Confidence            99999997 4689999999986653


No 432
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.41  E-value=6e-13  Score=110.53  Aligned_cols=82  Identities=28%  Similarity=0.201  Sum_probs=69.6

Q ss_pred             CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCcccc
Q 019842          232 RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL  311 (335)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  311 (335)
                      |+|.+++..  .+..+++..++.++.|+++||+|||++   +      ||+|||+++++.+|+  ||+++......    
T Consensus         1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----   63 (176)
T smart00750        1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ----   63 (176)
T ss_pred             CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence            688888863  245699999999999999999999998   5      999999999999999  99987654322    


Q ss_pred             ccccccCccccccccCCcCc
Q 019842          312 KLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       312 ~~~gt~~y~aPE~l~~~~~~  331 (335)
                       ..|++.|||||++.++.++
T Consensus        64 -~~g~~~y~aPE~~~~~~~~   82 (176)
T smart00750       64 -SRVDPYFMAPEVIQGQSYT   82 (176)
T ss_pred             -CCCcccccChHHhcCCCCc
Confidence             2588999999999888765


No 433
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.40  E-value=1.9e-12  Score=114.30  Aligned_cols=167  Identities=20%  Similarity=0.294  Sum_probs=105.8

Q ss_pred             cccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCC----------CceeEEeeEE---
Q 019842          154 HESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHH----------PNVVCLLGYS---  216 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~---  216 (335)
                      ...+.||.|+++.||.+++. +++.+|+|.+...   .....+++++|.-....+.+          -.++.-++..   
T Consensus        15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~   94 (288)
T PF14531_consen   15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP   94 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred             EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence            44678999999999999876 5899999988432   23345667777655555433          1122111211   


Q ss_pred             ------EeC---C-----eEEEEEEecCCCCHhHHhc---C-CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecC
Q 019842          217 ------AHD---D-----TRFIVYELMENRSLDIQLH---G-PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRD  278 (335)
Q Consensus       217 ------~~~---~-----~~~lv~E~~~~g~L~~~l~---~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrd  278 (335)
                            ...   +     ..+++|+-+ .++|.+.+.   . ......+....++.+..|+++.+++||+.   +++|+|
T Consensus        95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd  170 (288)
T PF14531_consen   95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD  170 (288)
T ss_dssp             TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred             CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence                  111   1     236677766 467765542   2 12223455666788889999999999999   999999


Q ss_pred             CCCCCEEEcCCCcEEEEcccCceeCCCCCccccccccccCccccccccC
Q 019842          279 LKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       279 lk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      |+|+|++++++|.++|+||+.....+.....   ...+..|.+||....
T Consensus       171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~  216 (288)
T PF14531_consen  171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESC  216 (288)
T ss_dssp             -SGGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHH
T ss_pred             cceeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhh
Confidence            9999999999999999999987665443221   234578999997644


No 434
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.38  E-value=6.5e-13  Score=124.65  Aligned_cols=125  Identities=29%  Similarity=0.437  Sum_probs=103.3

Q ss_pred             HhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCe-EecCC
Q 019842          201 LSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAV-IHRDL  279 (335)
Q Consensus       201 l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-vHrdl  279 (335)
                      |+.++|.|+.+++|.+.++...+.|.+|+..|+|.+.+..  ....+++.-...+..+++.||+|||.-   +| .|+.+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l   75 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL   75 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence            3568999999999999999999999999999999999974  456789999999999999999999986   55 99999


Q ss_pred             CCCCEEEcCCCcEEEEcccCceeCCCC--CccccccccccCccccccccCCcC
Q 019842          280 KSSNILLDSKFNAKLSDFGLAITDGSQ--NKNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       280 k~~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      +++|+++|....+||+|||+.......  ........-..-|.|||.+.+...
T Consensus        76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~  128 (484)
T KOG1023|consen   76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALS  128 (484)
T ss_pred             ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccc
Confidence            999999999999999999997554321  111111224567999999987543


No 435
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.37  E-value=7.1e-12  Score=107.89  Aligned_cols=142  Identities=20%  Similarity=0.240  Sum_probs=110.3

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCc-hhHHHHHHHHHHHhcCCC--CceeEEeeEEEeCC---eEEEEEEecC
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQ-DAGREFENEVDLLSNIHH--PNVVCLLGYSAHDD---TRFIVYELME  230 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~---~~~lv~E~~~  230 (335)
                      +.++.|..+.+|+++..+|..+++|....... ....++.+|.++++.+++  .++.+++.+....+   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56889999999999887778899998754322 134578999999999975  34577777776643   6689999999


Q ss_pred             CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------
Q 019842          231 NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHC----------------------------------------  270 (335)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------------  270 (335)
                      +.++...+..    ..++......++.+++++|..||+..                                        
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9888654421    34777788888999999999998521                                        


Q ss_pred             -------------CCCeEecCCCCCCEEEcC--CCcEEEEcccCcee
Q 019842          271 -------------NPAVIHRDLKSSNILLDS--KFNAKLSDFGLAIT  302 (335)
Q Consensus       271 -------------~~~ivHrdlk~~Nill~~--~~~~kl~Dfgla~~  302 (335)
                                   ...++|+|+.+.||++++  ++.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         245799999999999998  66789999998754


No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.32  E-value=4.8e-12  Score=113.39  Aligned_cols=115  Identities=29%  Similarity=0.425  Sum_probs=85.9

Q ss_pred             CCCceeEEeeEEEe---------------------------CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHH
Q 019842          205 HHPNVVCLLGYSAH---------------------------DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIAL  257 (335)
Q Consensus       205 ~H~niv~l~g~~~~---------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~  257 (335)
                      +|||||++.++|.+                           ...+|+||.-.+ .+|..++..    ...+...+.-++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~----~~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT----RHRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc----CCCchHHHHHHHH
Confidence            59999999987743                           235688887664 688888854    2356667788899


Q ss_pred             HHHHHHHHHhhCCCCCeEecCCCCCCEEE--cCCC--cEEEEcccCceeCCC------CCccccccccccCccccccccC
Q 019842          258 DTARGLEYLHEHCNPAVIHRDLKSSNILL--DSKF--NAKLSDFGLAITDGS------QNKNNLKLSGTLGYVAPEYLLD  327 (335)
Q Consensus       258 ~ia~~L~yLH~~~~~~ivHrdlk~~Nill--~~~~--~~kl~Dfgla~~~~~------~~~~~~~~~gt~~y~aPE~l~~  327 (335)
                      |+++|+.|||.+   ++.|||+|++|||+  |+|+  ...|+|||++.-...      -........|...-||||+...
T Consensus       349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            999999999999   99999999999998  4443  478899998743221      1112233457888999998754


No 437
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.28  E-value=6.1e-13  Score=123.06  Aligned_cols=106  Identities=28%  Similarity=0.444  Sum_probs=91.5

Q ss_pred             eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          221 TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       221 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      .+|+.|++|...+|.+++.+++.....++...+.++.|++.|++|   +   +.+|||+||.||+...+.++||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence            578999999999999999887778888999999999999999999   5   8999999999999999999999999997


Q ss_pred             eeCCCCC------ccccccccccCccccccccCCcCcc
Q 019842          301 ITDGSQN------KNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       301 ~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                      .......      ...+...||..||+||.+.+..|+.
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~  441 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSE  441 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhh
Confidence            5443222      2333457999999999999998864


No 438
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25  E-value=1.1e-10  Score=95.09  Aligned_cols=132  Identities=23%  Similarity=0.321  Sum_probs=96.5

Q ss_pred             eeeecccEEEEEEEeCCCceEEEEEe-ccc--Cch-----hHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEec
Q 019842          158 ILGEGGFGCVYKAKLDDNLHVAVKKL-DCA--TQD-----AGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELM  229 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~~~~vavK~~-~~~--~~~-----~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~  229 (335)
                      .+++|+-+.+|.+.+.+. .+.+|.- .+.  .++     ...+-.+|+.++.+++--.|..=.=+..+.+...++|||+
T Consensus         3 ~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            578999999999977543 3555532 221  111     1245678999998886544433333555667788999999


Q ss_pred             CCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          230 ENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      ++-.|.+.+...          ...++..+-.-+.-||..   +|+|+||.++||++..+. +.++||||+....
T Consensus        82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~  142 (204)
T COG3642          82 EGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD  142 (204)
T ss_pred             CChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence            999998888532          246677777778889999   999999999999998775 9999999996543


No 439
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.25  E-value=5.6e-12  Score=124.90  Aligned_cols=140  Identities=29%  Similarity=0.459  Sum_probs=94.4

Q ss_pred             hcCCcccceeeecccEEEEEEEeCC-CceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEe
Q 019842          150 TDSFHESNILGEGGFGCVYKAKLDD-NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~  228 (335)
                      .++|+.+++|..|+||.||..++++ .+.+|+|.-+ .+     -+.+-  ++.....|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----lilRn--ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LILRN--ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hhhhc--cccccCCccee------------------
Confidence            4688899999999999999998764 5677774322 11     11110  33333344443                  


Q ss_pred             cCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCC---
Q 019842          229 MENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGS---  305 (335)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~---  305 (335)
                         |+-...+.   .-.+++...        +.+++|||+.   +|+|||+||+|.+|+.-|.+|+.|||+++....   
T Consensus       136 ---gDc~tllk---~~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a  198 (1205)
T KOG0606|consen  136 ---GDCATLLK---NIGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA  198 (1205)
T ss_pred             ---chhhhhcc---cCCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence               33333332   222333332        7789999999   999999999999999999999999999743210   


Q ss_pred             ------------CCccccccccccCccccccccCCcCcc
Q 019842          306 ------------QNKNNLKLSGTLGYVAPEYLLDGMVGK  332 (335)
Q Consensus       306 ------------~~~~~~~~~gt~~y~aPE~l~~~~~~~  332 (335)
                                  ........+||+.|+|||++...-|+.
T Consensus       199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygk  237 (1205)
T KOG0606|consen  199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGK  237 (1205)
T ss_pred             chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCC
Confidence                        011122357999999999998886653


No 440
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24  E-value=1.2e-12  Score=128.03  Aligned_cols=173  Identities=25%  Similarity=0.366  Sum_probs=133.9

Q ss_pred             cCCcccceeeecccEEEEEEEeC--CCceEEEEEecccC--chhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEE
Q 019842          151 DSFHESNILGEGGFGCVYKAKLD--DNLHVAVKKLDCAT--QDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       151 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv  225 (335)
                      ..|...+.||+|.|+.|-.....  ....+|+|.+....  .........|..+-..+. |+|++++++...+.+..++.
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            35566777999999999887653  34556666665443  223344556777777776 99999999999999999999


Q ss_pred             EEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEecCCCCCCEEEcCCC-cEEEEcccCceeC
Q 019842          226 YELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLH-EHCNPAVIHRDLKSSNILLDSKF-NAKLSDFGLAITD  303 (335)
Q Consensus       226 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfgla~~~  303 (335)
                      +||.+++++.+.+.. ......+....-.+..|+..++.|+| ..   ++.|||+||+|.+++..+ ..|++|||+|...
T Consensus       100 ~~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cCccccccccccccc-CCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccc
Confidence            999999999877731 12224666777899999999999999 77   999999999999999999 9999999999544


Q ss_pred             CC---CCcccccccc-ccCccccccccC
Q 019842          304 GS---QNKNNLKLSG-TLGYVAPEYLLD  327 (335)
Q Consensus       304 ~~---~~~~~~~~~g-t~~y~aPE~l~~  327 (335)
                      ..   ........+| ++.|+|||...+
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~  203 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSG  203 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccc
Confidence            33   2222234568 999999999877


No 441
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.18  E-value=3e-10  Score=92.32  Aligned_cols=143  Identities=19%  Similarity=0.184  Sum_probs=99.5

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEe-ccc-------CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEE
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKL-DCA-------TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~-~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~  226 (335)
                      ....+-+|+-+.|+++.+. |+...||.- ...       .+-..++..+|+..+.+++--.|.--.=++.+...-.++|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            4567899999999999885 555566532 211       1123456788999998876433332222444555567999


Q ss_pred             EecCC-CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc---EEEEcccCcee
Q 019842          227 ELMEN-RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN---AKLSDFGLAIT  302 (335)
Q Consensus       227 E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~---~kl~Dfgla~~  302 (335)
                      ||+++ .++.+++..... ..........++.++-+.+.-||.+   +++|+||..+||+|.+++.   +.++|||++..
T Consensus        90 E~~~g~~~vk~~i~~~~~-~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTME-DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHcc-CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence            99986 367777754222 1222333367888899999999999   9999999999999976543   58999999844


No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15  E-value=2.3e-10  Score=109.10  Aligned_cols=122  Identities=18%  Similarity=0.284  Sum_probs=101.8

Q ss_pred             EeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHH
Q 019842          171 KLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWH  250 (335)
Q Consensus       171 ~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~  250 (335)
                      +..++.+|.|...+..+........+-+..|+.+|||||++++...+.++..|+|+|-+.  .|..++..      +...
T Consensus        33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~  104 (690)
T KOG1243|consen   33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKE  104 (690)
T ss_pred             eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHH
Confidence            345688899988876666445557778889999999999999999999999999999884  56555532      3356


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          251 MRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       251 ~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      .....+.||+.||.|||+.|  +++|++|....|++++.|..||++|.++..
T Consensus       105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~  154 (690)
T KOG1243|consen  105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSK  154 (690)
T ss_pred             HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence            67778899999999999776  899999999999999999999999988643


No 443
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.12  E-value=7.3e-10  Score=92.60  Aligned_cols=126  Identities=23%  Similarity=0.223  Sum_probs=82.9

Q ss_pred             EEEEEEeCCCceEEEEEecccC------------------------c--hhHHHHHHHHHHHhcCCCC--ceeEEeeEEE
Q 019842          166 CVYKAKLDDNLHVAVKKLDCAT------------------------Q--DAGREFENEVDLLSNIHHP--NVVCLLGYSA  217 (335)
Q Consensus       166 ~Vy~~~~~~~~~vavK~~~~~~------------------------~--~~~~~~~~E~~~l~~l~H~--niv~l~g~~~  217 (335)
                      .||.|...+|..+|+|......                        .  .......+|.+.|.++...  ++.+.+++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            3899998889999999763210                        0  0123467899999999765  566666553 


Q ss_pred             eCCeEEEEEEecC--CCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 019842          218 HDDTRFIVYELME--NRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYL-HEHCNPAVIHRDLKSSNILLDSKFNAKL  294 (335)
Q Consensus       218 ~~~~~~lv~E~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivHrdlk~~Nill~~~~~~kl  294 (335)
                         .-.+||||++  +..+......     .++......++.+++..+..+ |..   +++|+||.+.||+++++ .+.|
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred             ---CCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence               2369999998  5455443321     111334566777788866664 677   99999999999999988 9999


Q ss_pred             EcccCceeCC
Q 019842          295 SDFGLAITDG  304 (335)
Q Consensus       295 ~Dfgla~~~~  304 (335)
                      +|||.+....
T Consensus       148 IDf~qav~~~  157 (188)
T PF01163_consen  148 IDFGQAVDSS  157 (188)
T ss_dssp             --GTTEEETT
T ss_pred             EecCcceecC
Confidence            9999986654


No 444
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.11  E-value=2.2e-09  Score=94.98  Aligned_cols=142  Identities=14%  Similarity=0.086  Sum_probs=101.6

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCch-hH----------HHHHHHHHHHhcCCCCc--eeEEeeEEEe----
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD-AG----------REFENEVDLLSNIHHPN--VVCLLGYSAH----  218 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~H~n--iv~l~g~~~~----  218 (335)
                      .+++-+-....|++..+ +|+.+.||+....... ..          ..+.+|...+.++...+  ....+++.+.    
T Consensus        27 ~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         27 GEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP  105 (268)
T ss_pred             CcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence            35566555566777776 4678999977433321 11          14778988888874333  3344555443    


Q ss_pred             -CCeEEEEEEecCCC-CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC-------C
Q 019842          219 -DDTRFIVYELMENR-SLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS-------K  289 (335)
Q Consensus       219 -~~~~~lv~E~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~-------~  289 (335)
                       ....++|+|++++- +|.+++.... ....+...+..++.+++..+.-||+.   +++|+|++++|||++.       +
T Consensus       106 ~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~  181 (268)
T PRK15123        106 ATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED  181 (268)
T ss_pred             ccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence             23578999999976 7888874321 23456677789999999999999999   9999999999999975       5


Q ss_pred             CcEEEEcccCcee
Q 019842          290 FNAKLSDFGLAIT  302 (335)
Q Consensus       290 ~~~kl~Dfgla~~  302 (335)
                      ..+.++||+.+..
T Consensus       182 ~~~~LIDl~r~~~  194 (268)
T PRK15123        182 LKLSVIDLHRAQI  194 (268)
T ss_pred             ceEEEEECCcccc
Confidence            7899999998844


No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09  E-value=7.8e-11  Score=110.97  Aligned_cols=172  Identities=27%  Similarity=0.258  Sum_probs=134.6

Q ss_pred             cCCcccceeee--cccEEEEEEEe---CCCceEEEEEeccc--CchhHHHHHHHHHHHhcC-CCCceeEEeeEEEeCCeE
Q 019842          151 DSFHESNILGE--GGFGCVYKAKL---DDNLHVAVKKLDCA--TQDAGREFENEVDLLSNI-HHPNVVCLLGYSAHDDTR  222 (335)
Q Consensus       151 ~~~~~~~~ig~--G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~  222 (335)
                      ..|...+.+|.  |.+|.+|.+..   .++..+|+|+-+..  ......+=.+|....+++ .|+|.++.+..+++.+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            45666788999  99999999976   46788999984332  222333345677777777 499999999999999999


Q ss_pred             EEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcc
Q 019842          223 FIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTAR----GLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDF  297 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Df  297 (335)
                      ++-+|++. .+|..+.+.  ....++....+....+..+    ||.++|+.   .++|-|+||.||++.++ ...+++||
T Consensus       194 fiqtE~~~-~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eeeecccc-chhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence            99999986 777777664  2345778888888888888    99999999   99999999999999999 88999999


Q ss_pred             cCceeCCCCCcccc-----ccccccCccccccccCC
Q 019842          298 GLAITDGSQNKNNL-----KLSGTLGYVAPEYLLDG  328 (335)
Q Consensus       298 gla~~~~~~~~~~~-----~~~gt~~y~aPE~l~~~  328 (335)
                      |+............     ...|...|++||.+.+-
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l  303 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL  303 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhccc
Confidence            99876655443222     22577789999998764


No 446
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.96  E-value=9.6e-09  Score=95.55  Aligned_cols=137  Identities=18%  Similarity=0.148  Sum_probs=107.5

Q ss_pred             ccEEEEEEEe-CCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCceeEEeeEEE----eCCeEEEEEEecCC-CCHhH
Q 019842          163 GFGCVYKAKL-DDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVVCLLGYSA----HDDTRFIVYELMEN-RSLDI  236 (335)
Q Consensus       163 ~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~----~~~~~~lv~E~~~~-g~L~~  236 (335)
                      ...+.||+.. .||..++.|+++............-++.++++.|+|+|++..++.    .+..+++||+|.++ ++|.+
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            3467888865 478999999995433333333445678999999999999998876    34578999999987 46765


Q ss_pred             HhcCC------------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          237 QLHGP------------SHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       237 ~l~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      .-...            ..+...++...|.++.|+..||.++|+.   |+.-+-|.+++||++.+.+++|+..|....
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv  442 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV  442 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence            54321            1234578899999999999999999999   999999999999999999999998887633


No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.94  E-value=4.3e-10  Score=98.76  Aligned_cols=126  Identities=24%  Similarity=0.320  Sum_probs=93.9

Q ss_pred             HHHhcCCCCceeEEeeEEEeCC-----eEEEEEEecCCCCHhHHhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 019842          199 DLLSNIHHPNVVCLLGYSAHDD-----TRFIVYELMENRSLDIQLHGP-SHGSALTWHMRMKIALDTARGLEYLHEHCNP  272 (335)
Q Consensus       199 ~~l~~l~H~niv~l~g~~~~~~-----~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~  272 (335)
                      .-|-++.|.|||+++.|+.+.+     ...++.|||..|++..+|+.. .....+......+++.||..||.|||+ |.|
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence            3455567999999999987654     468899999999999999763 344568888889999999999999999 688


Q ss_pred             CeEecCCCCCCEEEcCCCcEEEEcccCceeCC----CCCccccccccccCccccccc
Q 019842          273 AVIHRDLKSSNILLDSKFNAKLSDFGLAITDG----SQNKNNLKLSGTLGYVAPEYL  325 (335)
Q Consensus       273 ~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~----~~~~~~~~~~gt~~y~aPE~l  325 (335)
                      +++|+++..+.|++..++-+|+.--.......    ........-.+-++|.|||+=
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg  254 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESG  254 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcC
Confidence            99999999999999999999976432211100    000111112356788888863


No 448
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.83  E-value=4.8e-08  Score=84.50  Aligned_cols=135  Identities=20%  Similarity=0.140  Sum_probs=94.6

Q ss_pred             CcccceeeecccEEEEEEEeCCCceEEEEEeccc--------------------Cc--hhHHHHHHHHHHHhcCCCC--c
Q 019842          153 FHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCA--------------------TQ--DAGREFENEVDLLSNIHHP--N  208 (335)
Q Consensus       153 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--------------------~~--~~~~~~~~E~~~l~~l~H~--n  208 (335)
                      ..+.+.||.|.-+.||.|...+|.++|||.-+..                    ++  ......++|.++|.+|.-.  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            3456889999999999999999999999943211                    00  0123467899999998644  5


Q ss_pred             eeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcC
Q 019842          209 VVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDS  288 (335)
Q Consensus       209 iv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~  288 (335)
                      +.+-+++    +.-.+||||+++-.|...-        ++....-.++..|++-+.-+-..   ++||+|+..-||++++
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~  237 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE  237 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence            5555544    4457999999986664321        12223334444444444444455   9999999999999999


Q ss_pred             CCcEEEEcccCcee
Q 019842          289 KFNAKLSDFGLAIT  302 (335)
Q Consensus       289 ~~~~kl~Dfgla~~  302 (335)
                      ||.+.++||--+..
T Consensus       238 dg~~~vIDwPQ~v~  251 (304)
T COG0478         238 DGDIVVIDWPQAVP  251 (304)
T ss_pred             CCCEEEEeCccccc
Confidence            99999999976643


No 449
>PRK09902 hypothetical protein; Provisional
Probab=98.78  E-value=2.1e-07  Score=78.54  Aligned_cols=139  Identities=14%  Similarity=0.061  Sum_probs=102.4

Q ss_pred             eeecccEEEEEEEeCCCceEEEEEeccc------CchhHHHHHHHHHHHhcCCC--CceeEEeeEEEeCC----eEEEEE
Q 019842          159 LGEGGFGCVYKAKLDDNLHVAVKKLDCA------TQDAGREFENEVDLLSNIHH--PNVVCLLGYSAHDD----TRFIVY  226 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~~~~~vavK~~~~~------~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~----~~~lv~  226 (335)
                      -|+||.+.|++-..++. .+-+|+-...      .+.....|.+|...+.++..  -.+.+.........    ..+||+
T Consensus        26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            45688888999877654 6888887421      13355679999999999853  23444442222221    468999


Q ss_pred             EecCC-CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCc--EEEEcccCcee
Q 019842          227 ELMEN-RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFN--AKLSDFGLAIT  302 (335)
Q Consensus       227 E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~--~kl~Dfgla~~  302 (335)
                      |-+++ -+|.+++... ...+.+...+..+..+++..+.-||+.   ++.|+|+.+.||+++.++.  ++++||.-++.
T Consensus       105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            97764 5788877532 223567788889999999999999999   9999999999999986666  99999986643


No 450
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.78  E-value=1.1e-07  Score=81.19  Aligned_cols=108  Identities=20%  Similarity=0.192  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHhcCCC--CceeEEeeEEEeCC----eEEEEEEecCCC-CHhHHhcCCCCCCCCCHHHHHHHHHHHHHHH
Q 019842          191 GREFENEVDLLSNIHH--PNVVCLLGYSAHDD----TRFIVYELMENR-SLDIQLHGPSHGSALTWHMRMKIALDTARGL  263 (335)
Q Consensus       191 ~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~----~~~lv~E~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L  263 (335)
                      .....+|...+..+..  -...+.+++.+...    ..++|+|++++. +|.+++...   ...+......++.++++.+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHHHHHH
Confidence            3457788887777743  23445566655532    458999999874 788888542   1266677889999999999


Q ss_pred             HHHhhCCCCCeEecCCCCCCEEEcCCC---cEEEEcccCceeCC
Q 019842          264 EYLHEHCNPAVIHRDLKSSNILLDSKF---NAKLSDFGLAITDG  304 (335)
Q Consensus       264 ~yLH~~~~~~ivHrdlk~~Nill~~~~---~~kl~Dfgla~~~~  304 (335)
                      .-||+.   +++|+|+++.|||++.+.   .+.++||+-++...
T Consensus       132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            999999   999999999999999887   89999999876543


No 451
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.76  E-value=4.6e-09  Score=99.19  Aligned_cols=147  Identities=23%  Similarity=0.283  Sum_probs=116.8

Q ss_pred             hcCCcccceeeecccEEEEEEEe--CCCceEEEEEecccCchhHHH--HHHHHHHHhcC-CCCceeEEeeEEEeCCeEEE
Q 019842          150 TDSFHESNILGEGGFGCVYKAKL--DDNLHVAVKKLDCATQDAGRE--FENEVDLLSNI-HHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       150 ~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..+|.....||.|.|+.|++...  .++..+++|.+.........+  -..|+.+...+ .|.++++.+..+...+..|+
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i  343 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI  343 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence            45677788999999999998754  467788988775443222222  24566666666 58889998888888888889


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCC-CcEEEEcccCcee
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSK-FNAKLSDFGLAIT  302 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Dfgla~~  302 (335)
                      =.||++++++....   .....+++..++++..|++.++.++|+.   .++|+|++|+||++..+ +.-++.|||++..
T Consensus       344 p~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  344 PLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             chhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccc
Confidence            99999999887655   2334578888999999999999999998   99999999999999886 8899999998843


No 452
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.69  E-value=1e-07  Score=91.29  Aligned_cols=140  Identities=19%  Similarity=0.157  Sum_probs=89.9

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCch----------------------------------------hHHHHHH
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQD----------------------------------------AGREFEN  196 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~~~~  196 (335)
                      +-|+.++-|.||+|++.+|+.||||+.+..-..                                        .+-++.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            578999999999999999999999987532111                                        0112445


Q ss_pred             HHHHHhcCC----CCceeEEeeEEE-eCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHH-HHHHhhCC
Q 019842          197 EVDLLSNIH----HPNVVCLLGYSA-HDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARG-LEYLHEHC  270 (335)
Q Consensus       197 E~~~l~~l~----H~niv~l~g~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~-L~yLH~~~  270 (335)
                      |..-+.+++    ...=+.+=.+++ -.....|+|||++|-.+.+...-..  ...+.   ..++..++++ ++.+-.. 
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~f~~q~~~d-  284 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRAFLRQLLRD-  284 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHHHHHHHHhc-
Confidence            555444442    222223333333 3456789999999988876642111  22332   2333333332 1222223 


Q ss_pred             CCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          271 NPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       271 ~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                        +++|.|..|.||+++.++.+.+.|||+.....
T Consensus       285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             --CccccCCCccceEEecCCcEEEEcCcceecCC
Confidence              89999999999999999999999999985543


No 453
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.67  E-value=5e-07  Score=78.19  Aligned_cols=139  Identities=18%  Similarity=0.192  Sum_probs=85.3

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCc--eeEEeeEEEeCCeEEEEEEecCCCC-
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPN--VVCLLGYSAHDDTRFIVYELMENRS-  233 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lv~E~~~~g~-  233 (335)
                      ..||+|..+.||+.   .+..+++|......  ......+|.++++.+..-.  +.+.++++...+...+|||+++|.+ 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            56899999999984   24456777765422  2345688999998886433  4677888888888889999999863 


Q ss_pred             HhHH---------------------hcCCC-CCCCCCHHHHHHHHH----------HHHH-HHHHHhhC-CCCCeEecCC
Q 019842          234 LDIQ---------------------LHGPS-HGSALTWHMRMKIAL----------DTAR-GLEYLHEH-CNPAVIHRDL  279 (335)
Q Consensus       234 L~~~---------------------l~~~~-~~~~l~~~~~~~i~~----------~ia~-~L~yLH~~-~~~~ivHrdl  279 (335)
                      +...                     +|... ....+.... ..+-.          .+.+ ...+|... ..+.++|+|+
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~-~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYK-EKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHH-HHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence            2111                     22210 011111000 00000          0111 12223221 1336789999


Q ss_pred             CCCCEEEcCCCcEEEEcccCcee
Q 019842          280 KSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       280 k~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      .|.||++++++ +.|+||+.+..
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcCc
Confidence            99999999988 99999998743


No 454
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.59  E-value=1.9e-06  Score=73.09  Aligned_cols=139  Identities=13%  Similarity=0.157  Sum_probs=92.0

Q ss_pred             HHhcCCcccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHH---------HHHHHHHhcCCCC---ceeEEeeE
Q 019842          148 KATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREF---------ENEVDLLSNIHHP---NVVCLLGY  215 (335)
Q Consensus       148 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~H~---niv~l~g~  215 (335)
                      ....+|...+++-......|.+-..+ |..+.+|.........++.|         .+++..+.+++..   ....++.+
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            34567888888887777777766664 56788888765443333322         3444444444322   22232333


Q ss_pred             EEe-----CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCC
Q 019842          216 SAH-----DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKF  290 (335)
Q Consensus       216 ~~~-----~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~  290 (335)
                      .+.     ....+|+|||++|..|.+...       +++    .++..+.+++.-||+.   |+.|+|..|.|++++++ 
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~-  171 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN-  171 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-
Confidence            222     235578999999988865431       222    3556677889999999   99999999999999865 


Q ss_pred             cEEEEcccCcee
Q 019842          291 NAKLSDFGLAIT  302 (335)
Q Consensus       291 ~~kl~Dfgla~~  302 (335)
                      .++++||+..+.
T Consensus       172 ~i~iID~~~k~~  183 (229)
T PF06176_consen  172 GIRIIDTQGKRM  183 (229)
T ss_pred             cEEEEECccccc
Confidence            499999987654


No 455
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.57  E-value=1.3e-06  Score=75.43  Aligned_cols=144  Identities=25%  Similarity=0.253  Sum_probs=85.9

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCC--ceeEEeeEEEeC---CeEEEEEEecC
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHP--NVVCLLGYSAHD---DTRFIVYELME  230 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~---~~~~lv~E~~~  230 (335)
                      .+.++.|..+.+|+...++ ..+++|.....  .....+.+|..++..+...  .+.+++.++...   ...+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3568999999999999887 58899987543  4566788899888888533  356667655333   35799999999


Q ss_pred             CCCHhH----------------H---hcCC-CCCCCCCHHHH---------HHH------------HHHHHH-HHHHHhh
Q 019842          231 NRSLDI----------------Q---LHGP-SHGSALTWHMR---------MKI------------ALDTAR-GLEYLHE  268 (335)
Q Consensus       231 ~g~L~~----------------~---l~~~-~~~~~l~~~~~---------~~i------------~~~ia~-~L~yLH~  268 (335)
                      +..+..                .   ++.. .......+...         ...            ...+.+ .++.+++
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            887766                1   1111 01111111110         000            111222 3333332


Q ss_pred             C----CCCCeEecCCCCCCEEEc-CCCcEEEEcccCcee
Q 019842          269 H----CNPAVIHRDLKSSNILLD-SKFNAKLSDFGLAIT  302 (335)
Q Consensus       269 ~----~~~~ivHrdlk~~Nill~-~~~~~kl~Dfgla~~  302 (335)
                      .    ....++|+|+.+.||+++ +++.+.|+||+.+..
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            1    234799999999999999 666678999998744


No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.56  E-value=1.2e-06  Score=75.20  Aligned_cols=152  Identities=20%  Similarity=0.185  Sum_probs=96.2

Q ss_pred             cHHHHHHHhcCCcccce---eeecccEEEEEEEeCCCceEEEEEecccCchh------------------------HHHH
Q 019842          142 EYKLLEKATDSFHESNI---LGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA------------------------GREF  194 (335)
Q Consensus       142 ~~~~l~~~~~~~~~~~~---ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------~~~~  194 (335)
                      +...+....++..+...   |++|.-+.||+|...++..+|||++.......                        ....
T Consensus        36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~  115 (268)
T COG1718          36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA  115 (268)
T ss_pred             HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence            34445555555544444   55677789999998889999999885432111                        0123


Q ss_pred             HHHHHHHhcCCC--CceeEEeeEEEeCCeEEEEEEecCCCCH-hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 019842          195 ENEVDLLSNIHH--PNVVCLLGYSAHDDTRFIVYELMENRSL-DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCN  271 (335)
Q Consensus       195 ~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lv~E~~~~g~L-~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~  271 (335)
                      .+|..-|.++..  -.+.+=+++.    .-.|||||+..... .-.|    ....+...+...+..++++.+.-|-..+ 
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~~l~~~a-  186 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMRRLYKEA-  186 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHHHHHHhc-
Confidence            345555555432  1222222222    22699999975421 1112    1122334467777888888888887633 


Q ss_pred             CCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          272 PAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       272 ~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                       ++||+||..-|||+. ++.+.|+|||-|....
T Consensus       187 -~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         187 -GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             -CcccccchhhheEEE-CCeEEEEECccccccC
Confidence             999999999999999 8899999999885543


No 457
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.50  E-value=1.9e-06  Score=75.44  Aligned_cols=140  Identities=18%  Similarity=0.179  Sum_probs=85.4

Q ss_pred             eeeccc-EEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCC-CCceeEEeeEEEeCCeEEEEEEecCCCCHhH
Q 019842          159 LGEGGF-GCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIH-HPNVVCLLGYSAHDDTRFIVYELMENRSLDI  236 (335)
Q Consensus       159 ig~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lv~E~~~~g~L~~  236 (335)
                      |..|.. ..||+...++ ..+.+|......   ...+.+|++++..+. +--+.+++++....+..++|||+++|.++..
T Consensus         6 ~~~g~~~~~v~~~~~~~-~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGKN-PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCCC-CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            444554 7899987654 677888775332   345678888888873 4446677888777677899999999877653


Q ss_pred             H-------------------hcCCCC-CCCCCH--HHHHHHHH--------------------HHHHHHHHHhh----CC
Q 019842          237 Q-------------------LHGPSH-GSALTW--HMRMKIAL--------------------DTARGLEYLHE----HC  270 (335)
Q Consensus       237 ~-------------------l~~~~~-~~~l~~--~~~~~i~~--------------------~ia~~L~yLH~----~~  270 (335)
                      .                   +|.... ..+...  ........                    .+...++.|-.    ..
T Consensus        82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (244)
T cd05150          82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE  161 (244)
T ss_pred             hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence            2                   222110 001110  00010000                    01112222211    12


Q ss_pred             CCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          271 NPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       271 ~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      .+.++|+|+.|.|||++++....|+||+.+..
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            34689999999999999988889999998743


No 458
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.47  E-value=8.5e-07  Score=74.39  Aligned_cols=102  Identities=26%  Similarity=0.171  Sum_probs=81.0

Q ss_pred             HHHHHHHhcCCC-CceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 019842          195 ENEVDLLSNIHH-PNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPA  273 (335)
Q Consensus       195 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~  273 (335)
                      ..|.-+++.+++ +++.+++|+|-+    ++|.||.+.+++...-..-.....-+|..|.+||.++++.+++|++...-.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            457888888876 699999999944    689999988766422100012234689999999999999999999854336


Q ss_pred             eEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          274 VIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       274 ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      +.-.|++++|+-+++++.+|+.|...+
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v  109 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDV  109 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhc
Confidence            778999999999999999999999876


No 459
>PLN02876 acyl-CoA dehydrogenase
Probab=98.36  E-value=8e-06  Score=83.85  Aligned_cols=147  Identities=16%  Similarity=0.263  Sum_probs=91.9

Q ss_pred             cceeeecccEEEEEEEeCCC---ceEEEEEecccC-chhHHHHHHHHHHHhcCC-CCce--eEEeeEEEeC---CeEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDDN---LHVAVKKLDCAT-QDAGREFENEVDLLSNIH-HPNV--VCLLGYSAHD---DTRFIV  225 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lv  225 (335)
                      .+.++.|.+..+|+....++   ..+++|+..... ......+.+|.++++.+. |.++  .+++++|.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            45688899999999877654   356777654322 123457889999999995 6664  7888888765   467999


Q ss_pred             EEecCCCCHhH-----------------------HhcCCCC--------CCCCCH--HHHHHHH---------------H
Q 019842          226 YELMENRSLDI-----------------------QLHGPSH--------GSALTW--HMRMKIA---------------L  257 (335)
Q Consensus       226 ~E~~~~g~L~~-----------------------~l~~~~~--------~~~l~~--~~~~~i~---------------~  257 (335)
                      |||+++..+.+                       .||....        +.+..+  .+..++.               -
T Consensus       123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~  202 (822)
T PLN02876        123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP  202 (822)
T ss_pred             EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence            99998764321                       1222110        001111  1111111               1


Q ss_pred             HHHHHHHHHhhCCC--------CCeEecCCCCCCEEEcCC-C-cEEEEcccCcee
Q 019842          258 DTARGLEYLHEHCN--------PAVIHRDLKSSNILLDSK-F-NAKLSDFGLAIT  302 (335)
Q Consensus       258 ~ia~~L~yLH~~~~--------~~ivHrdlk~~Nill~~~-~-~~kl~Dfgla~~  302 (335)
                      .+.+.+++|..+..        +.++|+|+++.||+++.+ . ..-|.||+++..
T Consensus       203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            23344667754322        359999999999999853 3 357999998744


No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.27  E-value=8.9e-06  Score=78.02  Aligned_cols=141  Identities=18%  Similarity=0.179  Sum_probs=86.5

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchh-------------------------------------HHHHHHHH
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA-------------------------------------GREFENEV  198 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E~  198 (335)
                      .+-||....|.||+|++.+|+.||||+.+..-+..                                     .-+|.+|+
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            35799999999999999999999999875321110                                     01233443


Q ss_pred             HHH----hcCCCCc---eeEEeeEEEe-CCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 019842          199 DLL----SNIHHPN---VVCLLGYSAH-DDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHC  270 (335)
Q Consensus       199 ~~l----~~l~H~n---iv~l~g~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~  270 (335)
                      +-.    ..+.|-+   =|.+=.++++ .....|+||||+|..+.+...-.  ...++......   .+.++  |++...
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~--~~gi~~~~i~~---~l~~~--~~~qIf  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAID--KRGISPHDILN---KLVEA--YLEQIF  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHH--HcCCCHHHHHH---HHHHH--HHHHHH
Confidence            322    2233544   1112222222 34679999999998775443211  12244443333   33332  222222


Q ss_pred             CCCeEecCCCCCCEEEcC----CCcEEEEcccCceeC
Q 019842          271 NPAVIHRDLKSSNILLDS----KFNAKLSDFGLAITD  303 (335)
Q Consensus       271 ~~~ivHrdlk~~Nill~~----~~~~kl~Dfgla~~~  303 (335)
                      ..|++|.|-.|.||+++.    ++++.+-|||+....
T Consensus       319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI  355 (538)
T ss_pred             hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence            338999999999999984    678999999997544


No 461
>PRK10593 hypothetical protein; Provisional
Probab=98.22  E-value=5.3e-05  Score=68.41  Aligned_cols=78  Identities=10%  Similarity=0.101  Sum_probs=57.4

Q ss_pred             cccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCC---CceeEEeeEEEeC---CeEEEEEE
Q 019842          154 HESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHH---PNVVCLLGYSAHD---DTRFIVYE  227 (335)
Q Consensus       154 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~---~~~~lv~E  227 (335)
                      ...+.||.|..+.||+....++ .+.+|..+.  ......+.+|.+.|+.|.-   -.+.+++++|...   +..++|||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             heeeecCCccceeEEEEEcCCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            3456799999999999877666 456666432  1133578999999998853   3678888887653   56899999


Q ss_pred             ecCCCCH
Q 019842          228 LMENRSL  234 (335)
Q Consensus       228 ~~~~g~L  234 (335)
                      +++++++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998654


No 462
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=98.21  E-value=5.1e-05  Score=64.04  Aligned_cols=132  Identities=21%  Similarity=0.316  Sum_probs=91.9

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEecccC----------------chhHHHHHHHHHHHhcCC------CCceeEE
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKLDCAT----------------QDAGREFENEVDLLSNIH------HPNVVCL  212 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------H~niv~l  212 (335)
                      ....||+|+.-.||.  +.+....+||+.....                ....++..+|+.....+.      +.+|.++
T Consensus         5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            456899999999996  3344556788775444                223456677776665555      7899999


Q ss_pred             eeEEEeCCeEEEEEEecCC------CCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEE
Q 019842          213 LGYSAHDDTRFIVYELMEN------RSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILL  286 (335)
Q Consensus       213 ~g~~~~~~~~~lv~E~~~~------g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill  286 (335)
                      +|+.+++...-+|+|.+.+      -+|.+++..    ..++. .   +...+-+-.+||-++   .|+.+|++|.||++
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~---~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~  151 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-E---LRQALDEFKRYLLDH---HIVIRDLNPHNIVV  151 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-H---HHHHHHHHHHHHHHc---CCeecCCCcccEEE
Confidence            9999999988999998754      256677632    23444 2   333333445677777   99999999999999


Q ss_pred             cCCC----cEEEEc-ccC
Q 019842          287 DSKF----NAKLSD-FGL  299 (335)
Q Consensus       287 ~~~~----~~kl~D-fgl  299 (335)
                      ..+.    .+.|+| ||-
T Consensus       152 ~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  152 QRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             EecCCCceEEEEEeCCCC
Confidence            6432    577777 443


No 463
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.12  E-value=3.2e-07  Score=87.68  Aligned_cols=158  Identities=21%  Similarity=0.182  Sum_probs=111.0

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCc-eeEEeeEEEeCCeEEEEEEecCCC-CH
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPN-VVCLLGYSAHDDTRFIVYELMENR-SL  234 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lv~E~~~~g-~L  234 (335)
                      +-++++++++++|.+-...+....+.+...     ....-++++|.+++||| .+..++-++.++..+++++++..+ +-
T Consensus       248 h~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~  322 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS  322 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence            447789999999887544433445544322     44567899999999999 777777777778899999999877 22


Q ss_pred             hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCCCccccccc
Q 019842          235 DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLKLS  314 (335)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  314 (335)
                      .....  .....+...+...+.+.-+++++|||+.   .=+|||    ||+..+ +..|..||+......... ......
T Consensus       323 ~~~~~--~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t~~  391 (829)
T KOG0576|consen  323 ALEMT--VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRTAI  391 (829)
T ss_pred             cccCC--hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc-ccccCC
Confidence            11110  1112344445556777788899999987   568998    777655 689999999886665443 233457


Q ss_pred             cccCccccccccCCcC
Q 019842          315 GTLGYVAPEYLLDGMV  330 (335)
Q Consensus       315 gt~~y~aPE~l~~~~~  330 (335)
                      +++.|+|||+...+.+
T Consensus       392 ~~~~~~~pev~~~~~~  407 (829)
T KOG0576|consen  392 GTPEPLAPEVIQENTI  407 (829)
T ss_pred             CCCCCCCchhhccccc
Confidence            8999999998877765


No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.07  E-value=3.9e-05  Score=66.78  Aligned_cols=73  Identities=15%  Similarity=0.207  Sum_probs=43.8

Q ss_pred             ceeeecccE-EEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCC---ceeEEeeEEEeC---CeEEEEEEec
Q 019842          157 NILGEGGFG-CVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHP---NVVCLLGYSAHD---DTRFIVYELM  229 (335)
Q Consensus       157 ~~ig~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~---~~~~lv~E~~  229 (335)
                      +.++.|+.. .||+.    +..+.+|....  ......+.+|.+.+..+...   -+.+.++.....   ...+++||++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            346666665 58875    22456665442  22345788999999877532   234444444332   2458899999


Q ss_pred             CCCCHh
Q 019842          230 ENRSLD  235 (335)
Q Consensus       230 ~~g~L~  235 (335)
                      +|.++.
T Consensus        77 ~G~~l~   82 (235)
T cd05155          77 EGETAT   82 (235)
T ss_pred             cCCCCC
Confidence            986663


No 465
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.06  E-value=7.5e-05  Score=64.89  Aligned_cols=141  Identities=19%  Similarity=0.182  Sum_probs=81.0

Q ss_pred             ceeeecccEEEEEEEeCC--CceEEEEEecccCchhHHHHHHHHHHHhcCCCC-ceeEEeeEEEeCCeEEEEEEecCCCC
Q 019842          157 NILGEGGFGCVYKAKLDD--NLHVAVKKLDCATQDAGREFENEVDLLSNIHHP-NVVCLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      +.|..|-...+|+....+  +..+++|....... ...+..+|+.++..+... -..++++.+.  +  .++|||+++.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCCCc
Confidence            456677788999988764  66788887654322 222345788888888433 3344554432  2  37999999876


Q ss_pred             HhHH-----------------hcCCCCCC--------CC-CHHHHHHHHH----------------------HHHHHHHH
Q 019842          234 LDIQ-----------------LHGPSHGS--------AL-TWHMRMKIAL----------------------DTARGLEY  265 (335)
Q Consensus       234 L~~~-----------------l~~~~~~~--------~l-~~~~~~~i~~----------------------~ia~~L~y  265 (335)
                      +...                 +|......        .. .+.....+..                      .+...+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            5211                 22211111        11 1122111111                      11111112


Q ss_pred             H----hhC-CCCCeEecCCCCCCEEEcC-CCcEEEEcccCcee
Q 019842          266 L----HEH-CNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAIT  302 (335)
Q Consensus       266 L----H~~-~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~  302 (335)
                      |    -.. ....++|+|+.+.|||+++ ++.+.++||..|..
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            2    111 2236899999999999998 57899999998754


No 466
>PF13095 FTA2:  Kinetochore Sim4 complex subunit FTA2
Probab=98.01  E-value=0.0001  Score=61.96  Aligned_cols=125  Identities=25%  Similarity=0.397  Sum_probs=89.5

Q ss_pred             cCCcccceeeeccc-EEEEEEEeCCCceEEEEEecc---cC--------c----------hhHHHHHHHHHHHhcCC---
Q 019842          151 DSFHESNILGEGGF-GCVYKAKLDDNLHVAVKKLDC---AT--------Q----------DAGREFENEVDLLSNIH---  205 (335)
Q Consensus       151 ~~~~~~~~ig~G~~-g~Vy~~~~~~~~~vavK~~~~---~~--------~----------~~~~~~~~E~~~l~~l~---  205 (335)
                      .+++..+.||.|.- |.||++++. |+.+|+|.+..   ..        .          .....|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            67778899999999 999999995 56999999321   00        0          11235788988888875   


Q ss_pred             CCce--eEEeeEEEeCC------------------eEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 019842          206 HPNV--VCLLGYSAHDD------------------TRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEY  265 (335)
Q Consensus       206 H~ni--v~l~g~~~~~~------------------~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~y  265 (335)
                      +.++  |+++||..-..                  ..-+|.||++...            .+    ..+-+.+|.+-|..
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~----~~~~~~~~~~dl~~  179 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PL----QIRDIPQMLRDLKI  179 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------cc----chhHHHHHHHHHHH
Confidence            4566  89999874321                  1356777765432            12    23445667777888


Q ss_pred             HhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          266 LHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       266 LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                      +|..   +|+-+|++++|..     .-||+|||.+
T Consensus       180 ~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKL---GIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHC---CeeeccCcccccc-----CCEEEecccC
Confidence            9998   9999999999986     5689999854


No 467
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.99  E-value=7.2e-05  Score=66.02  Aligned_cols=138  Identities=17%  Similarity=0.216  Sum_probs=77.5

Q ss_pred             eeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCce-eEEeeEEEeCCeEEEEEEecCCCCHhH-
Q 019842          159 LGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNV-VCLLGYSAHDDTRFIVYELMENRSLDI-  236 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~E~~~~g~L~~-  236 (335)
                      +..|-...+|+... ++..+++|..........-+..+|.++++.+....+ .++++.+.    -++|+||+++..+.. 
T Consensus         4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~   78 (256)
T TIGR02721         4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLD   78 (256)
T ss_pred             CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccc
Confidence            44577788998874 456778887543322211245778888888854323 33444432    368999999866531 


Q ss_pred             ----------------HhcCCC-CCCCCCHHHH-HHHHHH---------HHHHHHHHhhC-----CCCCeEecCCCCCCE
Q 019842          237 ----------------QLHGPS-HGSALTWHMR-MKIALD---------TARGLEYLHEH-----CNPAVIHRDLKSSNI  284 (335)
Q Consensus       237 ----------------~l~~~~-~~~~l~~~~~-~~i~~~---------ia~~L~yLH~~-----~~~~ivHrdlk~~Ni  284 (335)
                                      .+|... ...+++.... .....+         +.+.+..+-..     ..+.++|+|+.+.||
T Consensus        79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni  158 (256)
T TIGR02721        79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL  158 (256)
T ss_pred             cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence                            123211 1112222211 111111         11112222111     123689999999999


Q ss_pred             EEcCCCcEEEEcccCcee
Q 019842          285 LLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       285 ll~~~~~~kl~Dfgla~~  302 (335)
                      ++++++ +.|+||..|..
T Consensus       159 l~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       159 VVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEeCCC-CEEEeccccCc
Confidence            999877 78999998744


No 468
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.90  E-value=8.8e-05  Score=66.86  Aligned_cols=143  Identities=20%  Similarity=0.173  Sum_probs=85.3

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCc--eeEEeeE------EEeCCeEEEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPN--VVCLLGY------SAHDDTRFIVYE  227 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~------~~~~~~~~lv~E  227 (335)
                      .+.+..|....+|+...+++ .+++|....   ....++..|++++..+.+.+  +.+.+..      ....+..++|+|
T Consensus        19 i~~i~~G~~n~~y~v~~~~~-~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSG-RYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCCC-cEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            44566777789999876554 678887753   23345667888887774332  4444332      233456789999


Q ss_pred             ecCCCCHhH--------------HhcCCC----C----CCCCCHHHHH----------HHHHHHHHHHHHHhh----CCC
Q 019842          228 LMENRSLDI--------------QLHGPS----H----GSALTWHMRM----------KIALDTARGLEYLHE----HCN  271 (335)
Q Consensus       228 ~~~~g~L~~--------------~l~~~~----~----~~~l~~~~~~----------~i~~~ia~~L~yLH~----~~~  271 (335)
                      |++|..+..              .+|...    .    .....|....          .....+..++.++.+    ...
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            999866421              112100    0    0111222111          011123344555543    223


Q ss_pred             CCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          272 PAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       272 ~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ..++|+|+.|.|++++++..+.|.||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4799999999999999988789999988743


No 469
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.88  E-value=0.00015  Score=59.18  Aligned_cols=128  Identities=21%  Similarity=0.236  Sum_probs=84.5

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCcee-EEeeEEEeCCeEEEEEEecCCCC
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVV-CLLGYSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E~~~~g~  233 (335)
                      ..+.|++|.+|.||++.+.++ .+|+|.-...  .....+..|++++..+.-.++. +++.|..+    ++.|||+++-.
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~   98 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGG-EVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhcccccEEEEeeccCc-eEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcc
Confidence            356799999999999998654 7888876533  3456789999999998765543 34544333    45599999888


Q ss_pred             HhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCC-CCCEEEcCCCcEEEEcccCcee
Q 019842          234 LDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLK-SSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk-~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      |.+.-..      .+.+....++.. |..   |-..   +|-|+.|. |...+|.++..+.|+||.-|..
T Consensus        99 L~~~~~~------~~rk~l~~vlE~-a~~---LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          99 LGKLEIG------GDRKHLLRVLEK-AYK---LDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhhhhhc------ccHHHHHHHHHH-HHH---HHHh---ccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            8655321      123333333332 222   3333   88888775 4444454555999999998863


No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.85  E-value=0.0008  Score=62.92  Aligned_cols=76  Identities=16%  Similarity=0.152  Sum_probs=54.3

Q ss_pred             cceeeecccEEEEEEEeCCC-ceEEEEEeccc------C-chhHHHHHHHHHHHhcCC---CCceeEEeeEEEeCCeEEE
Q 019842          156 SNILGEGGFGCVYKAKLDDN-LHVAVKKLDCA------T-QDAGREFENEVDLLSNIH---HPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~------~-~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~l  224 (335)
                      .+.||.|.+..||++...+| +.|+||.-...      . .....+...|.+.|..+.   -.++.+++.+.  .+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEE
Confidence            35689999999999998877 48999985311      1 123456777888887763   24577777773  355789


Q ss_pred             EEEecCCCC
Q 019842          225 VYELMENRS  233 (335)
Q Consensus       225 v~E~~~~g~  233 (335)
                      ||||+++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998643


No 471
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.79  E-value=4.2e-06  Score=84.14  Aligned_cols=177  Identities=23%  Similarity=0.270  Sum_probs=117.7

Q ss_pred             HhcCCcccceeeecccEEEEEEEeC-CCceEEEEEeccc---CchhHHHHHHHHHHHhcCCCCceeEEeeEEEeCCeEEE
Q 019842          149 ATDSFHESNILGEGGFGCVYKAKLD-DNLHVAVKKLDCA---TQDAGREFENEVDLLSNIHHPNVVCLLGYSAHDDTRFI  224 (335)
Q Consensus       149 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  224 (335)
                      ..+.+.+.+-+.+|.++.++.++-. .|...+.|.....   ...+.+....+-.++-..+||-+++..-.+......+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            3456666777888999988877532 2333333333221   12222333344444444456777666555555678899


Q ss_pred             EEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCC
Q 019842          225 VYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG  304 (335)
Q Consensus       225 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~  304 (335)
                      +++|+.+++|...|+..   ...+..........+..+++|||..   .+.|||++|.|.+...++..+++|||.....+
T Consensus       882 ~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg  955 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG  955 (1205)
T ss_pred             hhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccc
Confidence            99999999999988753   2455555556667788899999997   79999999999999999999999998431100


Q ss_pred             -------C----------------------CC--ccccccccccCccccccccCCcCc
Q 019842          305 -------S----------------------QN--KNNLKLSGTLGYVAPEYLLDGMVG  331 (335)
Q Consensus       305 -------~----------------------~~--~~~~~~~gt~~y~aPE~l~~~~~~  331 (335)
                             .                      ..  .......||+.|.+||.+.+...+
T Consensus       956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hg 1013 (1205)
T KOG0606|consen  956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHG 1013 (1205)
T ss_pred             cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCC
Confidence                   0                      00  012234589999999999877654


No 472
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.74  E-value=0.00029  Score=63.74  Aligned_cols=141  Identities=24%  Similarity=0.283  Sum_probs=82.7

Q ss_pred             ceeeecccEEEEEEEeCC-------CceEEEEEecccCchhHHHHHHHHHHHhcCCCCce-eEEeeEEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKLDD-------NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNV-VCLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~E~  228 (335)
                      +.+..|-...+|+....+       +..+++|...... ....+..+|.+++..+....+ .++++++..    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            345556667899887655       4778888875433 223456778888888753322 345555542    358999


Q ss_pred             cCCCCHhHH-----------------hcCCCCCC------CCC--HHHHHH--------------------------HHH
Q 019842          229 MENRSLDIQ-----------------LHGPSHGS------ALT--WHMRMK--------------------------IAL  257 (335)
Q Consensus       229 ~~~g~L~~~-----------------l~~~~~~~------~l~--~~~~~~--------------------------i~~  257 (335)
                      ++|..+...                 +|......      ..+  +.....                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            988665321                 22211110      110  111100                          111


Q ss_pred             HHHHHHHHHhh------CCCCCeEecCCCCCCEEEcCC----CcEEEEcccCcee
Q 019842          258 DTARGLEYLHE------HCNPAVIHRDLKSSNILLDSK----FNAKLSDFGLAIT  302 (335)
Q Consensus       258 ~ia~~L~yLH~------~~~~~ivHrdlk~~Nill~~~----~~~kl~Dfgla~~  302 (335)
                      .+..-+++|-.      .....++|+|+.+.||+++++    +.++++||..|..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22233444432      234578999999999999985    8899999998854


No 473
>PRK05231 homoserine kinase; Provisional
Probab=97.71  E-value=0.0015  Score=59.58  Aligned_cols=142  Identities=15%  Similarity=0.188  Sum_probs=76.6

Q ss_pred             ceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCc--eeEEee------EEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPN--VVCLLG------YSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g------~~~~~~~~~lv~E~  228 (335)
                      +.++.|....+|+...++| .+++|+.....   ...+..|++++..|...+  +.+.+.      +....+..++++||
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            4466677778999887666 67888875212   233344555555543211  223222      12234567999999


Q ss_pred             cCCCCHh--------------HHhcCCCC--------CCCCCH-HHHHHH------------H-HHHHHHHHHHhh----
Q 019842          229 MENRSLD--------------IQLHGPSH--------GSALTW-HMRMKI------------A-LDTARGLEYLHE----  268 (335)
Q Consensus       229 ~~~g~L~--------------~~l~~~~~--------~~~l~~-~~~~~i------------~-~~ia~~L~yLH~----  268 (335)
                      ++|..+.              ..+|....        ...+.| .....-            . ..+...++.+.+    
T Consensus       104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  183 (319)
T PRK05231        104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP  183 (319)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence            9986431              11221110        011112 111111            1 111112233321    


Q ss_pred             CCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          269 HCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       269 ~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ....+++|+|+.+.||+++++...-|+||+.+..
T Consensus       184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            1345899999999999999776678999998743


No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.68  E-value=0.0011  Score=60.10  Aligned_cols=143  Identities=18%  Similarity=0.215  Sum_probs=81.7

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCC--ceeEEeeEE------EeCCeEEEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHP--NVVCLLGYS------AHDDTRFIVYE  227 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~------~~~~~~~lv~E  227 (335)
                      .+.++.|....+|+...+++ .+++|......  ...+...|.+++..|...  .+.+.+...      ...+..++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            34566676789999876655 56678764321  123455666777666422  233443321      22356789999


Q ss_pred             ecCCCCHh--------------HHhcCCCCC------C---CCCHHHHH------------HHHHHHHHHHHHHhh----
Q 019842          228 LMENRSLD--------------IQLHGPSHG------S---ALTWHMRM------------KIALDTARGLEYLHE----  268 (335)
Q Consensus       228 ~~~~g~L~--------------~~l~~~~~~------~---~l~~~~~~------------~i~~~ia~~L~yLH~----  268 (335)
                      |++|..+.              ..+|....+      .   .-.|....            .....+.+.++++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            99885432              112221110      0   01111110            011123345555543    


Q ss_pred             CCCCCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          269 HCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       269 ~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      ....+++|+|+.+.|+++++++...|+||+.+.
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             cCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            234589999999999999998877899999873


No 475
>PF03881 Fructosamin_kin:  Fructosamine kinase;  InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.62  E-value=0.00035  Score=62.60  Aligned_cols=74  Identities=20%  Similarity=0.285  Sum_probs=48.9

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCC---CCceeEEeeEEEeCCeEEEEEEecCC
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIH---HPNVVCLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      ..+.++.|....+|+.. .+++.+.||.-.   ......|..|.+-|+.|.   --.+.+.+++...++..+||+||++.
T Consensus        21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~   96 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM   96 (288)
T ss_dssp             EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred             eeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence            34568888889999987 567789999875   334467889988888883   34577888888877778999999987


Q ss_pred             C
Q 019842          232 R  232 (335)
Q Consensus       232 g  232 (335)
                      +
T Consensus        97 ~   97 (288)
T PF03881_consen   97 G   97 (288)
T ss_dssp             -
T ss_pred             C
Confidence            7


No 476
>PLN02236 choline kinase
Probab=97.47  E-value=0.0014  Score=60.44  Aligned_cols=140  Identities=19%  Similarity=0.215  Sum_probs=79.4

Q ss_pred             eeeecccEEEEEEEeCC-----CceEEEEEecccCchhHHHHHHHHHHHhcCCCCcee-EEeeEEEeCCeEEEEEEecCC
Q 019842          158 ILGEGGFGCVYKAKLDD-----NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVV-CLLGYSAHDDTRFIVYELMEN  231 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E~~~~  231 (335)
                      .+-.|-...+|+....+     +..+.+|.......... +-.+|..++..+...++. ++++.+...    .|+||+++
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g  117 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA  117 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence            34446677888886532     35788887754433222 236788888888543333 455655332    58999987


Q ss_pred             CCHhHH-----------------hcCCC-CCC--CCCHHHHHHHHHH-----------------HHHHHHHHh----h-C
Q 019842          232 RSLDIQ-----------------LHGPS-HGS--ALTWHMRMKIALD-----------------TARGLEYLH----E-H  269 (335)
Q Consensus       232 g~L~~~-----------------l~~~~-~~~--~l~~~~~~~i~~~-----------------ia~~L~yLH----~-~  269 (335)
                      .++...                 +|... ...  ...+....++..+                 +...+..|.    . .
T Consensus       118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~  197 (344)
T PLN02236        118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD  197 (344)
T ss_pred             CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence            666311                 22211 011  1122222222211                 111222222    1 2


Q ss_pred             CCCCeEecCCCCCCEEEcC-CCcEEEEcccCcee
Q 019842          270 CNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAIT  302 (335)
Q Consensus       270 ~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~  302 (335)
                      ....++|+|+++.||++++ ++.+.++||..+..
T Consensus       198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            2336899999999999986 47899999998854


No 477
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.31  E-value=0.0044  Score=56.08  Aligned_cols=137  Identities=17%  Similarity=0.257  Sum_probs=77.9

Q ss_pred             EEEEEEEeCCCceEEEEEecc--cCchhHHHHHHHHHHHhcCCC--CceeEEeeEEEeCC--eEEEEEEecCCCCHhHHh
Q 019842          165 GCVYKAKLDDNLHVAVKKLDC--ATQDAGREFENEVDLLSNIHH--PNVVCLLGYSAHDD--TRFIVYELMENRSLDIQL  238 (335)
Q Consensus       165 g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~--~~~lv~E~~~~g~L~~~l  238 (335)
                      -.+|..... +++..++ ...  ..........+|..+|+.+.-  --+...+++|.++.  ..|.||+|+++..+.+.+
T Consensus        39 n~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~  116 (321)
T COG3173          39 NDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSAL  116 (321)
T ss_pred             cceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcC
Confidence            344444332 6667777 321  223344566788888888742  23445678888776  779999999874332221


Q ss_pred             ---------------------cCCC------CC-------CC-CCHHHHHHHHH--------HHHHHHHHHhhCC-----
Q 019842          239 ---------------------HGPS------HG-------SA-LTWHMRMKIAL--------DTARGLEYLHEHC-----  270 (335)
Q Consensus       239 ---------------------~~~~------~~-------~~-l~~~~~~~i~~--------~ia~~L~yLH~~~-----  270 (335)
                                           |+..      .+       .+ -.|....+.+.        ....-..||+++.     
T Consensus       117 ~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~  196 (321)
T COG3173         117 PPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAG  196 (321)
T ss_pred             CcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCC
Confidence                                 1100      00       00 01111110000        1122234444432     


Q ss_pred             CCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          271 NPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       271 ~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      .+.++|+|+.+.|++++++.-+=|.||+++..-
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            246899999999999999988999999998553


No 478
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.27  E-value=0.0033  Score=57.41  Aligned_cols=139  Identities=17%  Similarity=0.254  Sum_probs=94.7

Q ss_pred             ccceeeecccEEEEEEEeCCCceEEEEEecccC----------------------chh----HHHHHHHHHHHhcCCCCc
Q 019842          155 ESNILGEGGFGCVYKAKLDDNLHVAVKKLDCAT----------------------QDA----GREFENEVDLLSNIHHPN  208 (335)
Q Consensus       155 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~----~~~~~~E~~~l~~l~H~n  208 (335)
                      +..+|..|.-+.||.|.-.+|..+|||+++..-                      .+.    .-....|++-|.+|+...
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            345788899999999999999999999764210                      001    112456777777776544


Q ss_pred             eeEEeeEEEeCCeEEEEEEecCCCCH-hHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEc
Q 019842          209 VVCLLGYSAHDDTRFIVYELMENRSL-DIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLD  287 (335)
Q Consensus       209 iv~l~g~~~~~~~~~lv~E~~~~g~L-~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~  287 (335)
                      |.----...  ..-.|||+|+....- .-.|    +...++...+...-.|++.-|.-|.+.|  ++||.||.--|+|+-
T Consensus       228 IP~PePIlL--k~hVLVM~FlGrdgw~aPkL----Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh  299 (520)
T KOG2270|consen  228 IPCPEPILL--KNHVLVMEFLGRDGWAAPKL----KDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH  299 (520)
T ss_pred             CCCCCceee--ecceEeeeeccCCCCcCccc----ccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE
Confidence            211000000  133689999963222 1112    3345777778888888999999998888  999999999999885


Q ss_pred             CCCcEEEEcccCcee
Q 019842          288 SKFNAKLSDFGLAIT  302 (335)
Q Consensus       288 ~~~~~kl~Dfgla~~  302 (335)
                       +|.+.|+|.+-+..
T Consensus       300 -dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  300 -DGKLYIIDVSQSVE  313 (520)
T ss_pred             -CCEEEEEEcccccc
Confidence             56899999987744


No 479
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.23  E-value=0.0054  Score=57.38  Aligned_cols=73  Identities=14%  Similarity=0.091  Sum_probs=49.4

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEeccc----Cc---hhHHHHHHHHHHHhcCC---CCceeEEeeEEEeCCeEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCA----TQ---DAGREFENEVDLLSNIH---HPNVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~----~~---~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv  225 (335)
                      .+.||.|....||+.... +..++||+-...    ..   ....+-..|.+.|+.+.   ..++.+++.++.+  ..+++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEE
Confidence            456899999999998864 456889876411    11   12334445566666553   3578888888874  45788


Q ss_pred             EEecCC
Q 019842          226 YELMEN  231 (335)
Q Consensus       226 ~E~~~~  231 (335)
                      |||+++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999976


No 480
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.14  E-value=0.00081  Score=60.27  Aligned_cols=133  Identities=17%  Similarity=0.132  Sum_probs=88.7

Q ss_pred             CCcccceeeecccEEEEEEEeCCCceEEEEEecc--------------------cCchh--HHHHHHHHHHHhcCC-CC-
Q 019842          152 SFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDC--------------------ATQDA--GREFENEVDLLSNIH-HP-  207 (335)
Q Consensus       152 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~--------------------~~~~~--~~~~~~E~~~l~~l~-H~-  207 (335)
                      -+...+.||-|.-+.||.+...+|++.++|.-..                    .++..  .-...+|...|+.|. |- 
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999898888873211                    01111  113457888888874 32 


Q ss_pred             ceeEEeeEEEeCCeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEc
Q 019842          208 NVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLD  287 (335)
Q Consensus       208 niv~l~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~  287 (335)
                      -+.+-++    .+..++|||++.+-.|...-+      ..+...   +...+..-+.-|-.+   |+||+|..-=||+++
T Consensus       173 pVPkpiD----~~RH~Vvmelv~g~Pl~~v~~------v~d~~~---ly~~lm~~Iv~la~~---GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  173 PVPKPID----HNRHCVVMELVDGYPLRQVRH------VEDPPT---LYDDLMGLIVRLANH---GLIHGDFNEFNIMVK  236 (465)
T ss_pred             CCCCccc----ccceeeHHHhhcccceeeeee------cCChHH---HHHHHHHHHHHHHHc---CceecccchheeEEe
Confidence            1233333    345689999999888754321      112222   233333334455566   999999999999999


Q ss_pred             CCCcEEEEcccCc
Q 019842          288 SKFNAKLSDFGLA  300 (335)
Q Consensus       288 ~~~~~kl~Dfgla  300 (335)
                      +++.++++||--.
T Consensus       237 dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  237 DDDKIVVIDFPQM  249 (465)
T ss_pred             cCCCEEEeechHh
Confidence            9999999999754


No 481
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.11  E-value=0.0004  Score=67.51  Aligned_cols=69  Identities=29%  Similarity=0.548  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCceeCCCC-Cc------ccc--ccccccCccccccccC
Q 019842          257 LDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQ-NK------NNL--KLSGTLGYVAPEYLLD  327 (335)
Q Consensus       257 ~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~~~~-~~------~~~--~~~gt~~y~aPE~l~~  327 (335)
                      .+++.||.|+|..  +++||++|.|++|.++.++..||+.|+++...... ..      ...  -......|.|||++..
T Consensus       106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            3455999999976  48999999999999999999999999987443221 10      000  1124568999999876


No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=97.08  E-value=0.0094  Score=53.21  Aligned_cols=31  Identities=29%  Similarity=0.453  Sum_probs=25.8

Q ss_pred             CCeEecCCCCCCEEEcCCCc-EEEEcccCcee
Q 019842          272 PAVIHRDLKSSNILLDSKFN-AKLSDFGLAIT  302 (335)
Q Consensus       272 ~~ivHrdlk~~Nill~~~~~-~kl~Dfgla~~  302 (335)
                      +.++|+|+.+.||++++++. .-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            35899999999999998555 56999998754


No 483
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.97  E-value=0.0077  Score=55.27  Aligned_cols=140  Identities=19%  Similarity=0.246  Sum_probs=77.3

Q ss_pred             eeeecccEEEEEEEeCC----CceEEEEEecccCchhHHHHHHHHHHHhcCCCCce-eEEeeEEEeCCeEEEEEEecCCC
Q 019842          158 ILGEGGFGCVYKAKLDD----NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNV-VCLLGYSAHDDTRFIVYELMENR  232 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~E~~~~g  232 (335)
                      .+..|-...+|+....+    +..|.+|....... ..-+-.+|..+++.+...++ .++++++.. +   +|.||+++.
T Consensus        21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~~-G---~i~~fi~g~   95 (330)
T PLN02421         21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFGN-G---MIQSFINAR   95 (330)
T ss_pred             EeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeCC-c---EeehhhcCC
Confidence            34446667888886543    23788887754332 22234678888888865444 345655532 2   589999776


Q ss_pred             CHhH-----------------HhcCCC-C--CCCCCHHHHHHHHHH----------------------HHHHHHHHhh--
Q 019842          233 SLDI-----------------QLHGPS-H--GSALTWHMRMKIALD----------------------TARGLEYLHE--  268 (335)
Q Consensus       233 ~L~~-----------------~l~~~~-~--~~~l~~~~~~~i~~~----------------------ia~~L~yLH~--  268 (335)
                      .+..                 .+|... .  ...-.|....++..+                      +.+-+..+..  
T Consensus        96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~  175 (330)
T PLN02421         96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT  175 (330)
T ss_pred             CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence            5521                 122211 0  011122222222211                      1111222211  


Q ss_pred             ---CCCCCeEecCCCCCCEEEcC-CCcEEEEcccCcee
Q 019842          269 ---HCNPAVIHRDLKSSNILLDS-KFNAKLSDFGLAIT  302 (335)
Q Consensus       269 ---~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfgla~~  302 (335)
                         ....-++|.|+.+.|||+++ ++.++++||..|..
T Consensus       176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence               11224799999999999975 57899999998743


No 484
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.95  E-value=0.013  Score=53.04  Aligned_cols=29  Identities=28%  Similarity=0.376  Sum_probs=25.5

Q ss_pred             CCeEecCCCCCCEEEcCCCcEEEEcccCce
Q 019842          272 PAVIHRDLKSSNILLDSKFNAKLSDFGLAI  301 (335)
Q Consensus       272 ~~ivHrdlk~~Nill~~~~~~kl~Dfgla~  301 (335)
                      .+++|+|+.+.||++++ +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            47899999999999988 678999999663


No 485
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.80  E-value=0.02  Score=52.68  Aligned_cols=73  Identities=15%  Similarity=0.117  Sum_probs=47.4

Q ss_pred             eeeecccEEEEEEEeCCC-ceEEEEEecc-------cCchhHHHHHHHHHHHhcCC--CC-ceeEEeeEEEeCCeEEEEE
Q 019842          158 ILGEGGFGCVYKAKLDDN-LHVAVKKLDC-------ATQDAGREFENEVDLLSNIH--HP-NVVCLLGYSAHDDTRFIVY  226 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~~-~~vavK~~~~-------~~~~~~~~~~~E~~~l~~l~--H~-niv~l~g~~~~~~~~~lv~  226 (335)
                      -||.|....||++...+| +.|+||.-..       .-+-...+..-|.+.|....  -| .+.+++.+  +.+...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            378899999999997654 5799996521       11233455667777776653  23 45555443  445567999


Q ss_pred             EecCCC
Q 019842          227 ELMENR  232 (335)
Q Consensus       227 E~~~~g  232 (335)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            999653


No 486
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.61  E-value=0.0098  Score=54.32  Aligned_cols=73  Identities=21%  Similarity=0.201  Sum_probs=57.0

Q ss_pred             CeEEEEEEecCCCCHhHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccC
Q 019842          220 DTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGL  299 (335)
Q Consensus       220 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgl  299 (335)
                      ...|++|++. ++++.       ....-.+++.+.++.+.+.-+.-+-...  +.=|||+.-.||||+ +|++.|+||-+
T Consensus       299 ~y~yl~~kdh-gt~is-------~ik~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfkl  367 (488)
T COG5072         299 LYLYLHFKDH-GTPIS-------IIKADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKL  367 (488)
T ss_pred             eEEEEEEecC-Cceee-------eeecccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeee
Confidence            3556777764 34442       1233568899999999998888887664  889999999999999 99999999999


Q ss_pred             ceeC
Q 019842          300 AITD  303 (335)
Q Consensus       300 a~~~  303 (335)
                      ++..
T Consensus       368 sRl~  371 (488)
T COG5072         368 SRLS  371 (488)
T ss_pred             eecc
Confidence            9753


No 487
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.58  E-value=0.0087  Score=55.50  Aligned_cols=165  Identities=16%  Similarity=0.207  Sum_probs=100.9

Q ss_pred             cceeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcC-CCCceeE--------EeeEEEeCCeEEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNI-HHPNVVC--------LLGYSAHDDTRFIVY  226 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~--------l~g~~~~~~~~~lv~  226 (335)
                      ..-||+|+-+.+|-.-  +-...+.|+......-...   +.++.|.+. .||-+-.        |+|-- .+...-+.|
T Consensus        16 gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~-~~~~iGflm   89 (637)
T COG4248          16 GRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGR-RGKVIGFLM   89 (637)
T ss_pred             CccccCCccceeeecc--hhhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCC-ccceeEEec
Confidence            5679999999998532  1112244655433322222   223344444 5664332        11111 112245666


Q ss_pred             EecCCCC-HhHHhc---CCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCcee
Q 019842          227 ELMENRS-LDIQLH---GPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT  302 (335)
Q Consensus       227 E~~~~g~-L~~~l~---~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~  302 (335)
                      ..+++.. ...+..   ++.......|.-.++.++.+|.+.+-||+.   +.+-+|+.++|+|+.+++.+.|.|-..-..
T Consensus        90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi  166 (637)
T COG4248          90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI  166 (637)
T ss_pred             ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence            6665532 222221   123344589999999999999999999999   999999999999999999999998543211


Q ss_pred             CCCCCccccccccccCccccccccCCcC
Q 019842          303 DGSQNKNNLKLSGTLGYVAPEYLLDGMV  330 (335)
Q Consensus       303 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~  330 (335)
                      . ..........|...|.+||.-.-+.+
T Consensus       167 ~-~ng~~~~cpVg~~eftPPElQ~~~sf  193 (637)
T COG4248         167 N-ANGTLHLCPVGVSEFTPPELQTLPSF  193 (637)
T ss_pred             c-cCCceEecccCccccCCHHHhccccc
Confidence            1 12222223468899999998664433


No 488
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.52  E-value=0.03  Score=48.01  Aligned_cols=73  Identities=21%  Similarity=0.269  Sum_probs=50.2

Q ss_pred             eeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCC---CCceeEEeeEEEeCCeEEEEEEecCCCCHh
Q 019842          159 LGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIH---HPNVVCLLGYSAHDDTRFIVYELMENRSLD  235 (335)
Q Consensus       159 ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lv~E~~~~g~L~  235 (335)
                      +.-|.--..|+.. ++..++.||.-.   ......|..|+.-|..|.   .-++.+++.+-.+.+..|+|+||++.|.++
T Consensus        24 v~gG~inea~~v~-dg~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          24 VSGGDINEAWRLR-DGTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             cCCccccceeEee-cCCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            3334334444433 245678888743   344567888887766663   456778888888999999999999987665


No 489
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.48  E-value=0.048  Score=49.45  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=28.8

Q ss_pred             CCCeEecCCCCCCEEEcCCCcEEEEcccCceeC
Q 019842          271 NPAVIHRDLKSSNILLDSKFNAKLSDFGLAITD  303 (335)
Q Consensus       271 ~~~ivHrdlk~~Nill~~~~~~kl~Dfgla~~~  303 (335)
                      ..+++|+|+.+.|+|+++++.+.++||..+...
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d  227 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASFA  227 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcccC
Confidence            347999999999999999999999999887543


No 490
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.46  E-value=0.0096  Score=50.80  Aligned_cols=30  Identities=37%  Similarity=0.459  Sum_probs=21.4

Q ss_pred             CeEecCCCCCCEEE-cCCCcEEEEcccCcee
Q 019842          273 AVIHRDLKSSNILL-DSKFNAKLSDFGLAIT  302 (335)
Q Consensus       273 ~ivHrdlk~~Nill-~~~~~~kl~Dfgla~~  302 (335)
                      -++|+|+.+.|||+ +.++.++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            57999999999999 8899999999998743


No 491
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.38  E-value=0.093  Score=48.03  Aligned_cols=71  Identities=18%  Similarity=0.177  Sum_probs=43.7

Q ss_pred             cccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCC--ceeE---Eee--EEEeCCeEEEEEEecCCCC
Q 019842          162 GGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHP--NVVC---LLG--YSAHDDTRFIVYELMENRS  233 (335)
Q Consensus       162 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~---l~g--~~~~~~~~~lv~E~~~~g~  233 (335)
                      +.-..||+...+++..+++|..+... ....++..|.+.+..|...  .++.   .-|  ....++..+.++++++|..
T Consensus        36 s~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~  113 (325)
T PRK11768         36 SYENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA  113 (325)
T ss_pred             cccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence            44467999988888888888875322 2345566777777666321  1221   222  2233456788999998754


No 492
>PRK06148 hypothetical protein; Provisional
Probab=96.29  E-value=0.075  Score=56.13  Aligned_cols=142  Identities=22%  Similarity=0.287  Sum_probs=77.0

Q ss_pred             eeeecccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcC-------CCCceeEEe-e----EEEe-CC--eE
Q 019842          158 ILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNI-------HHPNVVCLL-G----YSAH-DD--TR  222 (335)
Q Consensus       158 ~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~H~niv~l~-g----~~~~-~~--~~  222 (335)
                      .|+ |..-..|+.+.++|..+++|..+...  .......|...|..|       .-|.+++-. |    .... ++  ..
T Consensus        32 ~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~--~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~  108 (1013)
T PRK06148         32 PLD-GERDLNFRLTTDDGADYILKIVNPSE--PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRL  108 (1013)
T ss_pred             ecC-CcCCceEEEEeCCCCeEEEEEcCCcc--chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEE
Confidence            453 44577888888888889999986542  223334444555444       223434321 1    1111 22  45


Q ss_pred             EEEEEecCCCCHhHH-----------------hc----C---CCCCCCCCHHH-----------------HHHHHHHHHH
Q 019842          223 FIVYELMENRSLDIQ-----------------LH----G---PSHGSALTWHM-----------------RMKIALDTAR  261 (335)
Q Consensus       223 ~lv~E~~~~g~L~~~-----------------l~----~---~~~~~~l~~~~-----------------~~~i~~~ia~  261 (335)
                      +-+++|+++..+.+.                 ++    +   +.....+.|..                 ...++.++.+
T Consensus       109 vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~~  188 (1013)
T PRK06148        109 LRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFLA  188 (1013)
T ss_pred             EEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHHH
Confidence            678999998776541                 11    0   00011122221                 1122222222


Q ss_pred             HHH----HHhhCCCCCeEecCCCCCCEEEcCCC--cEE-EEcccCcee
Q 019842          262 GLE----YLHEHCNPAVIHRDLKSSNILLDSKF--NAK-LSDFGLAIT  302 (335)
Q Consensus       262 ~L~----yLH~~~~~~ivHrdlk~~Nill~~~~--~~k-l~Dfgla~~  302 (335)
                      ..+    ..-.....++||+|+.+.|||++.+.  .+. |+|||.+..
T Consensus       189 ~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        189 RFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             HHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            221    11122355899999999999999875  555 999998743


No 493
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.24  E-value=0.066  Score=48.98  Aligned_cols=137  Identities=20%  Similarity=0.243  Sum_probs=79.5

Q ss_pred             ccEEEEEEEeCCCceEEEEEecccCchhHHHHHHHHHHHhcCCCCc------eeEEeeE----EEeCCeEEEEEEecCCC
Q 019842          163 GFGCVYKAKLDDNLHVAVKKLDCATQDAGREFENEVDLLSNIHHPN------VVCLLGY----SAHDDTRFIVYELMENR  232 (335)
Q Consensus       163 ~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~g~----~~~~~~~~lv~E~~~~g  232 (335)
                      .-..+|+...++|.. ++|..+..  ....++.-|+..|..|.-.+      +..+-|-    .......+-+++|++|.
T Consensus        37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~  113 (331)
T COG2334          37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR  113 (331)
T ss_pred             ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence            445789888887766 77777654  34455666777777763211      2223222    11223678899999987


Q ss_pred             CHhH---------------HhcC----C-----CCCCCCCHHH-------------HHHHHHHHHHHHHHHhhCC----C
Q 019842          233 SLDI---------------QLHG----P-----SHGSALTWHM-------------RMKIALDTARGLEYLHEHC----N  271 (335)
Q Consensus       233 ~L~~---------------~l~~----~-----~~~~~l~~~~-------------~~~i~~~ia~~L~yLH~~~----~  271 (335)
                      .+..               .+|.    .     .......|..             ......++...++.+.+..    .
T Consensus       114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp  193 (331)
T COG2334         114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP  193 (331)
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence            7762               0111    0     0011223320             0113333444455544321    1


Q ss_pred             CC---eEecCCCCCCEEEcCCCc-EEEEcccCcee
Q 019842          272 PA---VIHRDLKSSNILLDSKFN-AKLSDFGLAIT  302 (335)
Q Consensus       272 ~~---ivHrdlk~~Nill~~~~~-~kl~Dfgla~~  302 (335)
                      ..   +||+|+.+.||+++.+.. .-+.||+.+..
T Consensus       194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             cccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            12   899999999999999885 89999998743


No 494
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.00  E-value=0.035  Score=51.83  Aligned_cols=74  Identities=19%  Similarity=0.231  Sum_probs=48.8

Q ss_pred             cceeeecccEEEEEEEeCC-CceEEEEEecc------cCchhHHHHHHHHHHHhcCC--CC-ceeEEeeEEEeCCeEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDD-NLHVAVKKLDC------ATQDAGREFENEVDLLSNIH--HP-NVVCLLGYSAHDDTRFIV  225 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~------~~~~~~~~~~~E~~~l~~l~--H~-niv~l~g~~~~~~~~~lv  225 (335)
                      .+.||-|.-..||++...+ +..|+||.-..      .-+-..++..-|.+.|+...  -| .+.+++.+  +.+...+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            4568999999999999753 56799986521      11234456677777777663  23 45556544  34456788


Q ss_pred             EEecCC
Q 019842          226 YELMEN  231 (335)
Q Consensus       226 ~E~~~~  231 (335)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            998864


No 495
>PF04478 Mid2:  Mid2 like cell wall stress sensor;  InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=95.94  E-value=0.0085  Score=47.30  Aligned_cols=30  Identities=10%  Similarity=0.263  Sum_probs=18.4

Q ss_pred             cccceeeEehhHHHHHHHHHHHHHHHHhhh
Q 019842           66 AHHKLLIALIIACSALCLIILALLCLWLYH   95 (335)
Q Consensus        66 ~~~~~~i~~~v~~~~~~~l~~~~~~~~~~~   95 (335)
                      ..+.++|+++|++++.++++++++++++|+
T Consensus        46 knknIVIGvVVGVGg~ill~il~lvf~~c~   75 (154)
T PF04478_consen   46 KNKNIVIGVVVGVGGPILLGILALVFIFCI   75 (154)
T ss_pred             CCccEEEEEEecccHHHHHHHHHhheeEEE
Confidence            344678888887776666555555544443


No 496
>PTZ00384 choline kinase; Provisional
Probab=95.85  E-value=0.11  Score=48.69  Aligned_cols=74  Identities=19%  Similarity=0.233  Sum_probs=44.1

Q ss_pred             ceeeecccEEEEEEEeCCC--ce-----EEEEEecccCchhHHHHHHHHHHHhcCCCCcee-EEeeEEEeCCeEEEEEEe
Q 019842          157 NILGEGGFGCVYKAKLDDN--LH-----VAVKKLDCATQDAGREFENEVDLLSNIHHPNVV-CLLGYSAHDDTRFIVYEL  228 (335)
Q Consensus       157 ~~ig~G~~g~Vy~~~~~~~--~~-----vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv~E~  228 (335)
                      +.+..|-...+|++...++  ..     |.++.... .....-+-.+|.++++.+...++. ++++.+..    .+++||
T Consensus        56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~-~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~ef  130 (383)
T PTZ00384         56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSST-YNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEW  130 (383)
T ss_pred             EEeCCcccceEEEEEecCCCCCccccceEEEEeccC-CCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEE
Confidence            3454577789999876543  12     44443322 112222346788899988655544 45555543    599999


Q ss_pred             cCCCCHh
Q 019842          229 MENRSLD  235 (335)
Q Consensus       229 ~~~g~L~  235 (335)
                      +++.+|.
T Consensus       131 IeGr~l~  137 (383)
T PTZ00384        131 VEGNTMG  137 (383)
T ss_pred             eccccCC
Confidence            9987763


No 497
>PF06679 DUF1180:  Protein of unknown function (DUF1180);  InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=95.68  E-value=0.21  Score=40.43  Aligned_cols=8  Identities=13%  Similarity=0.439  Sum_probs=3.0

Q ss_pred             HHhhhhcc
Q 019842           91 LWLYHLKY   98 (335)
Q Consensus        91 ~~~~~~~~   98 (335)
                      +..+|.|+
T Consensus       114 ir~~R~r~  121 (163)
T PF06679_consen  114 IRTFRLRR  121 (163)
T ss_pred             HHHHhhcc
Confidence            33343333


No 498
>PTZ00296 choline kinase; Provisional
Probab=95.24  E-value=0.26  Score=47.05  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=44.9

Q ss_pred             cceeeecccEEEEEEEeCC---------CceEEEEEecccCchhHHHHHHHHHHHhcCCCCcee-EEeeEEEeCCeEEEE
Q 019842          156 SNILGEGGFGCVYKAKLDD---------NLHVAVKKLDCATQDAGREFENEVDLLSNIHHPNVV-CLLGYSAHDDTRFIV  225 (335)
Q Consensus       156 ~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lv  225 (335)
                      .+.|..|-.-.+|+....+         ++.|.++.......... .-.+|..+++.+...+|. ++++.+.    -..|
T Consensus       110 i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI-dR~~E~~v~~~ls~~gi~P~l~~~f~----gg~I  184 (442)
T PTZ00296        110 VNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY-NPISEFEVYKTMSKYRIAPQLLNTFS----GGRI  184 (442)
T ss_pred             EEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee-CHHHHHHHHHHHHHCCCCCceEEEeC----CCEE
Confidence            3455556677888887542         35688887754433222 345677777777544443 3455443    2467


Q ss_pred             EEecCCCCH
Q 019842          226 YELMENRSL  234 (335)
Q Consensus       226 ~E~~~~g~L  234 (335)
                      .||+++.+|
T Consensus       185 ~efi~g~~l  193 (442)
T PTZ00296        185 EEWLYGDPL  193 (442)
T ss_pred             EEeeCCccC
Confidence            999998644


No 499
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.05  E-value=0.21  Score=42.84  Aligned_cols=115  Identities=17%  Similarity=0.133  Sum_probs=70.7

Q ss_pred             ccEEEEEEEeCCCceEEEEEecccCch-hHHHHHHHHHHHhcCCCCceeEEeeEEEeCC-eEEEEEEecCCCCHhHHhcC
Q 019842          163 GFGCVYKAKLDDNLHVAVKKLDCATQD-AGREFENEVDLLSNIHHPNVVCLLGYSAHDD-TRFIVYELMENRSLDIQLHG  240 (335)
Q Consensus       163 ~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lv~E~~~~g~L~~~l~~  240 (335)
                      +..+.-.++.+-| ...+|++....-. ...-|.++.+++++++  .|++|.   .+.. ..-++.|+|-.-.       
T Consensus        74 gNsTl~~~kt~iG-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~---NDn~~~yGvIlE~Cy~~~-------  140 (308)
T PF07387_consen   74 GNSTLLIGKTKIG-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLK---NDNNYKYGVILERCYKIK-------  140 (308)
T ss_pred             CceEEEEeccccc-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEee---cCCCceeEEEEeeccCcc-------
Confidence            3344444433333 3456666433322 3345788889998874  466665   2222 4557888873211       


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecCCCCCCEEEcCCCcEEEEcccCc
Q 019842          241 PSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA  300 (335)
Q Consensus       241 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfgla  300 (335)
                           .+.    ..+..-=+++|.-.|+. ..+.+|+|-.|+||+-|.+|.+||-|-+.-
T Consensus       141 -----i~~----~N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  141 -----INF----SNFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCL  190 (308)
T ss_pred             -----cch----hHHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhh
Confidence                 111    12222224667778864 458999999999999999999999998753


No 500
>PF08693 SKG6:  Transmembrane alpha-helix domain;  InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=94.89  E-value=0.018  Score=34.52  Aligned_cols=18  Identities=22%  Similarity=0.292  Sum_probs=8.0

Q ss_pred             cceeeEehhHHHHHHHHH
Q 019842           68 HKLLIALIIACSALCLII   85 (335)
Q Consensus        68 ~~~~i~~~v~~~~~~~l~   85 (335)
                      ....|++++++-++++++
T Consensus         9 ~~vaIa~~VvVPV~vI~~   26 (40)
T PF08693_consen    9 NTVAIAVGVVVPVGVIII   26 (40)
T ss_pred             ceEEEEEEEEechHHHHH
Confidence            344555554444433333


Done!